Pregenerated sensors for RYR3-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000259446Ensembl transcript IDs: ENST00000559457.1, ENST00000561458.5, ENST00000653439.1, ENST00000666561.1
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | ACCGGCACAGCCCAGACCGCAGGGGCCTGTGAGCGGACGAACCTCTaGAGTTATGTGGCTGCTGTCCCGAGTGGTGTACACGTTTCTCAC | + |
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Preference number: 5 (lower is better) Translates to: TGTAQTAGACERTNL*SYVAAVPSGVHVSH Trigger: GTGAGAAACGTGTACACCACTCGGGACAGCAGCCACATAACTTCAGAGGTTCGTCCGCTCACAGGCCCCTGCGGTCTGGGCTGTGCCGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653439.1 ENST00000666561.1 |
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| CDS CCA 90 bp | CCCAGACCGCAGGGGCCTGTGAGCGGACGAACCTCTGAAGTTATGTaGCTGCTGTCCCGAGTGGTGTACACGTTTCTCACCGCATTCATC | + |
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Preference number: 5 (lower is better) Translates to: PRPQGPVSGRTSEVM*LLSRVVYTFLTAFI Trigger: GATGAATGCGGTGAGAAACGTGTACACCACTCGGGACAGCAGCCACATAACTTCAGAGGTTCGTCCGCTCACAGGCCCCTGCGGTCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653439.1 ENST00000666561.1 |
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| CDS GCA 90 bp | AATCACCCTCGCTCCTCACTGCACCGTCTTCTCCTTGCCCAACAATaGACGCGGGTCCTAGCAAGGTATTCGAGTCCAGATCTCTCTCTC | + |
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Preference number: 5 (lower is better) Translates to: NHPRSSLHRLLLAQQ*TRVLARYSSPDLSL Trigger: GAGAGAGAGATCTGGACTCGAATACCTTGCTAGGACCCGCGTGCATTGTTGGGCAAGGAGAAGACGGTGCAGTGAGGAGCGAGGGTGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653439.1 ENST00000666561.1 |
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| CDS GCA 90 bp | GTAAGTGGACAATCACCCTCGCTCCTCACTGCACCGTCTTCTCCTTaGCCAACAATGCACGCGGGTCCTAGCAAGGTATTCGAGTCCAGA | + |
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Preference number: 5 (lower is better) Translates to: VSGQSPSLLTAPSSP*PTMHAGPSKVFESR Trigger: TCTGGACTCGAATACCTTGCTAGGACCCGCGTGCATTGTTGGGCAAGGAGAAGACGGTGCAGTGAGGAGCGAGGGTGATTGTCCACTTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653439.1 ENST00000666561.1 |
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| CDS GCA 90 bp | TCCTGGCTCCAGACCCGAAAACTAACTCTGCCCAAGATAACTAGCTaGCCCAGGACTCAGGGCAAACAAACAAACATGCTGCCCGGCCAA | + |
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Preference number: 5 (lower is better) Translates to: SWLQTRKLTLPKITS*PRTQGKQTNMLPGQ Trigger: TTGGCCGGGCAGCATGTTTGTTTGTTTGCCCTGAGTCCTGGGGCAGCTAGTTATCTTGGGCAGAGTTAGTTTTCGGGTCTGGAGCCAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653439.1 ENST00000666561.1 |
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| CDS TCA 90 bp | GCAGAGTCTCCACGCCCGTCTCCAGACAAACAGCCTATCGCTGCCTaGAATCGGTGCTTTGATTCTCAAATGCAGCTACTGGGCAACTCA | + |
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Preference number: 5 (lower is better) Translates to: AESPRPSPDKQPIAA*NRCFDSQMQLLGNS Trigger: TGAGTTGCCCAGTAGCTGCATTTGAGAATCAAAGCACCGATTTCAGGCAGCGATAGGCTGTTTGTCTGGAGACGGGCGTGGAGACTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653439.1 |
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| CDS GCA 90 bp | TGCCCCAGGACTCAGGGCAAACAAACAAACATGCTGCCCGGCCAATaGTGTGTCCTTTCTGCTCTAGCGAGAGAAGCTCCTGTTAAAACA | + |
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Preference number: 5 (lower is better) Translates to: CPRTQGKQTNMLPGQ*CVLSALAREAPVKT Trigger: TGTTTTAACAGGAGCTTCTCTCGCTAGAGCAGAAAGGACACAGCATTGGCCGGGCAGCATGTTTGTTTGTTTGCCCTGAGTCCTGGGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000653439.1 ENST00000666561.1 |
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| CDS CCA 90 bp | CTATCGCTGCCTGAAATCGGTGCTTTGATTCTCAAATGCAGCTACTaGGCAACTCACAGTCCCCTGCGTACTGAAGGCAGTTTCCTAGGC | + |
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Preference number: 5 (lower is better) Translates to: LSLPEIGALILKCSY*ATHSPLRTEGSFLG Trigger: GCCTAGGAAACTGCCTTCAGTACGCAGGGGACTGTGAGTTGCCCAGTAGCTGCATTTGAGAATCAAAGCACCGATTTCAGGCAGCGATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653439.1 |
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| CDS TCA 90 bp | CATGGACGTTTCTCCTGTCTGTATCTCTCACCAAGTGAACTCACATaGCAGCTGCAATGGCTGTGGGAGGGTGGGTATTCCAAACTGCTC | + |
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Preference number: 5 (lower is better) Translates to: HGRFSCLYLSPSELT*QLQWLWEGGYSKLL Trigger: GAGCAGTTTGGAATACCCACCCTCCCACAGCCATTGCAGCTGTCATGTGAGTTCACTTGGTGAGAGATACAGACAGGAGAAACGTCCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653439.1 ENST00000666561.1 |
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| CDS GCA 90 bp | ACAAACAGCCTATCGCTGCCTGAAATCGGTGCTTTGATTCTCAAATaGAGCTACTGGGCAACTCACAGTCCCCTGCGTACTGAAGGCAGT | + |
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Preference number: 5 (lower is better) Translates to: TNSLSLPEIGALILK*SYWATHSPLRTEGS Trigger: ACTGCCTTCAGTACGCAGGGGACTGTGAGTTGCCCAGTAGCTGCATTTGAGAATCAAAGCACCGATTTCAGGCAGCGATAGGCTGTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653439.1 |
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| CDS TCA 90 bp | TTGAATGGTGCATGGACGTTTCTCCTGTCTGTATCTCTCACCAAGTaGACTCACATGACAGCTGCAATGGCTGTGGGAGGGTGGGTATTC | + |
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Preference number: 5 (lower is better) Translates to: LNGAWTFLLSVSLTK*THMTAAMAVGGWVF Trigger: GAATACCCACCCTCCCACAGCCATTGCAGCTGTCATGTGAGTTCACTTGGTGAGAGATACAGACAGGAGAAACGTCCATGCACCATTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653439.1 ENST00000666561.1 |
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| CDS GCA 90 bp | ATCTCATGGAGACAATCTTTCCTGGGAGACAGGTCACGCAGCGGTTaGAATAGGTGTGACAAGCTTCCAAGCTATGTGTCGCACTGCAAA | + |
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Preference number: 5 (lower is better) Translates to: ISWRQSFLGDRSRSG*NRCDKLPSYVSHCK Trigger: TTTGCAGTGCGACACATAGCTTGGAAGCTTGTCACACCTATTGCAACCGCTGCGTGACCTGTCTCCCAGGAAAGATTGTCTCCATGAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653439.1 ENST00000666561.1 |
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| CDS TCA 90 bp | GCAGGGAAGATAAATACCAGACAAGGAGCCCAGAGATCTGGGCTTTaGTCCCAGCTTTCATCAATTCAGTTCACAGTTCACCTTAGGGGG | + |
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Preference number: 5 (lower is better) Translates to: AGKINTRQGAQRSGL*SQLSSIQFTVHLRG Trigger: CCCCCTAAGGTGAACTGTGAACTGAATTGATGAAAGCTGGGATCAAAGCCCAGATCTCTGGGCTCCTTGTCTGGTATTTATCTTCCCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000559457.1 ENST00000561458.5 |
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| CDS GCA 90 bp | GTTTCTCCTGTCTGTATCTCTCACCAAGTGAACTCACATGACAGCTaGAATGGCTGTGGGAGGGTGGGTATTCCAAACTGCTCAGGTTTT | + |
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Preference number: 5 (lower is better) Translates to: VSPVCISHQVNSHDS*NGCGRVGIPNCSGF Trigger: AAAACCTGAGCAGTTTGGAATACCCACCCTCCCACAGCCATTGCAGCTGTCATGTGAGTTCACTTGGTGAGAGATACAGACAGGAGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653439.1 ENST00000666561.1 |
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| CDS CCA 90 bp | TCACCGCATTCATCCCTAAGAATATCTCATGGAGACAATCTTTCCTaGGAGACAGGTCACGCAGCGGTTGCAATAGGTGTGACAAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: SPHSSLRISHGDNLS*ETGHAAVAIGVTSF Trigger: GAAGCTTGTCACACCTATTGCAACCGCTGCGTGACCTGTCTCCCAGGAAAGATTGTCTCCATGAGATATTCTTAGGGATGAATGCGGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653439.1 ENST00000666561.1 |
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| CDS CCA 90 bp | GTGGTGTACACGTTTCTCACCGCATTCATCCCTAAGAATATCTCATaGAGACAATCTTTCCTGGGAGACAGGTCACGCAGCGGTTGCAAT | + |
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Preference number: 5 (lower is better) Translates to: VVYTFLTAFIPKNIS*RQSFLGDRSRSGCN Trigger: ATTGCAACCGCTGCGTGACCTGTCTCCCAGGAAAGATTGTCTCCATGAGATATTCTTAGGGATGAATGCGGTGAGAAACGTGTACACCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653439.1 ENST00000666561.1 |
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| CDS GCA 90 bp | TCACATGACAGCTGCAATGGCTGTGGGAGGGTGGGTATTCCAAACTaGTCAGGTTTTAGCCTTGAGGTGGACATTAATCTTCTTGAGCAA | + |
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Preference number: 5 (lower is better) Translates to: SHDSCNGCGRVGIPN*SGFSLEVDINLLEQ Trigger: TTGCTCAAGAAGATTAATGTCCACCTCAAGGCTAAAACCTGAGCAGTTTGGAATACCCACCCTCCCACAGCCATTGCAGCTGTCATGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653439.1 |
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| CDS GCA 90 bp | TCACATGACAGCTGCAATGGCTGTGGGAGGGTGGGTATTCCAAACTaGTCAGGTTTTAGCCTTGAGGTGGACATTAATCTTCTTGAGCAT | + |
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Preference number: 5 (lower is better) Translates to: SHDSCNGCGRVGIPN*SGFSLEVDINLLEH Trigger: ATGCTCAAGAAGATTAATGTCCACCTCAAGGCTAAAACCTGAGCAGTTTGGAATACCCACCCTCCCACAGCCATTGCAGCTGTCATGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666561.1 |
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| CDS GCA 90 bp | CATTCAAACACATATCAGAGCCAGCCATTCAGTCTGAGTTCATCCTaGCTTCTATTCCTTCAGCAGGCGAACATGAAAGCAGAGTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: HSNTYQSQPFSLSSS*LLFLQQANMKAESP Trigger: TGGAGACTCTGCTTTCATGTTCGCCTGCTGAAGGAATAGAAGGCAGGATGAACTCAGACTGAATGGCTGGCTCTGATATGTGTTTGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653439.1 |
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| CDS CCA 90 bp | GCTCTAGCGAGAGAAGCTCCTGTTAAAACACAAACACAATCTTGTTaGATAGTAGGGGATTGTCGCAAACTCACACACAGCAGACGGTCA | + |
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Preference number: 5 (lower is better) Translates to: ALAREAPVKTQTQSC*IVGDCRKLTHSRRS Trigger: TGACCGTCTGCTGTGTGTGAGTTTGCGACAATCCCCTACTATCCAACAAGATTGTGTTTGTGTTTTAACAGGAGCTTCTCTCGCTAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000653439.1 ENST00000666561.1 |
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| CDS TCA 90 bp | TTTCCTCTCGTGGCGTCAAGCAGGAGTCCATCTGTGTGCCATTGGTaGAATGGTGGTGTTTACTTTGGTTTTCATTCAAACACATATCAG | + |
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Preference number: 5 (lower is better) Translates to: FPLVASSRSPSVCHW*NGGVYFGFHSNTYQ Trigger: CTGATATGTGTTTGAATGAAAACCAAAGTAAACACCACCATTTCACCAATGGCACACAGATGGACTCCTGCTTGACGCCACGAGAGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653439.1 |
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| CDS CCA 90 bp | CAGGAGTCCATCTGTGTGCCATTGGTGAAATGGTGGTGTTTACTTTaGTTTTCATTCAAACACATATCAGAGCCAGCCATTCAGTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: QESICVPLVKWWCLL*FSFKHISEPAIQSE Trigger: CTCAGACTGAATGGCTGGCTCTGATATGTGTTTGAATGAAAACCAAAGTAAACACCACCATTTCACCAATGGCACACAGATGGACTCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653439.1 |
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| CDS TCA 90 bp | CAGATAGGACACATTGGGTTCTATTCACCAGTCATAAATCTTCACTaGAGAACTTATGCTGTAAAAATAGGTTTCATATCCTGCCAGTTT | + |
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Preference number: 5 (lower is better) Translates to: QIGHIGFYSPVINLH*RTYAVKIGFISCQF Trigger: AAACTGGCAGGATATGAAACCTATTTTTACAGCATAAGTTCTTCAGTGAAGATTTATGACTGGTGAATAGAACCCAATGTGTCCTATCTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000653439.1 ENST00000666561.1 |
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| CDS TCA 72 bp | GCCCAGACCGCAGGGGCCTGTGAGCGGACGAACCTCTaGAGTTATGTGGCTGCTGTCCCGAGTGGTGTACAC | + |
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Preference number: 6 (lower is better) Translates to: AQTAGACERTNL*SYVAAVPSGVH Trigger: GTGTACACCACTCGGGACAGCAGCCACATAACTTCAGAGGTTCGTCCGCTCACAGGCCCCTGCGGTCTGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653439.1 ENST00000666561.1 |
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| CDS GCA 72 bp | CGCTCCTCACTGCACCGTCTTCTCCTTGCCCAACAATaGACGCGGGTCCTAGCAAGGTATTCGAGTCCAGAT | + |
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Preference number: 6 (lower is better) Translates to: RSSLHRLLLAQQ*TRVLARYSSPD Trigger: ATCTGGACTCGAATACCTTGCTAGGACCCGCGTGCATTGTTGGGCAAGGAGAAGACGGTGCAGTGAGGAGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653439.1 ENST00000666561.1 |
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| CDS GCA 72 bp | CAATCACCCTCGCTCCTCACTGCACCGTCTTCTCCTTaGCCAACAATGCACGCGGGTCCTAGCAAGGTATTC | + |
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Preference number: 6 (lower is better) Translates to: QSPSLLTAPSSP*PTMHAGPSKVF Trigger: GAATACCTTGCTAGGACCCGCGTGCATTGTTGGGCAAGGAGAAGACGGTGCAGTGAGGAGCGAGGGTGATTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653439.1 ENST00000666561.1 |
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| CDS GCA 72 bp | CTTTGTTGTAAGTGGACAATCACCCTCGCTCCTCACTaGACCGTCTTCTCCTTGCCCAACAATGCACGCGGG | + |
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Preference number: 6 (lower is better) Translates to: LCCKWTITLAPH*TVFSLPNNARG Trigger: CCCGCGTGCATTGTTGGGCAAGGAGAAGACGGTGCAGTGAGGAGCGAGGGTGATTGTCCACTTACAACAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653439.1 ENST00000666561.1 |
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| CDS TCA 72 bp | GCATGGACGTTTCTCCTGTCTGTATCTCTCACCAAGTaGACTCACATGACAGCTGCAATGGCTGTGGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: AWTFLLSVSLTK*THMTAAMAVGG Trigger: CCCTCCCACAGCCATTGCAGCTGTCATGTGAGTTCACTTGGTGAGAGATACAGACAGGAGAAACGTCCATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653439.1 ENST00000666561.1 |
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| CDS TCA 72 bp | CCACGCCCGTCTCCAGACAAACAGCCTATCGCTGCCTaGAATCGGTGCTTTGATTCTCAAATGCAGCTACTG | + |
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Preference number: 6 (lower is better) Translates to: PRPSPDKQPIAA*NRCFDSQMQLL Trigger: CAGTAGCTGCATTTGAGAATCAAAGCACCGATTTCAGGCAGCGATAGGCTGTTTGTCTGGAGACGGGCGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653439.1 |
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| CDS TCA 72 bp | GTTCATCCTGCCTTCTATTCCTTCAGCAGGCGAACATaGAAGCAGAGTCTCCACGCCCGTCTCCAGACAAAC | + |
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Preference number: 6 (lower is better) Translates to: VHPAFYSFSRRT*KQSLHARLQTN Trigger: GTTTGTCTGGAGACGGGCGTGGAGACTCTGCTTTCATGTTCGCCTGCTGAAGGAATAGAAGGCAGGATGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653439.1 |
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| CDS GCA 72 bp | ACTCAGGGCAAACAAACAAACATGCTGCCCGGCCAATaGTGTGTCCTTTCTGCTCTAGCGAGAGAAGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: TQGKQTNMLPGQ*CVLSALAREAP Trigger: AGGAGCTTCTCTCGCTAGAGCAGAAAGGACACAGCATTGGCCGGGCAGCATGTTTGTTTGTTTGCCCTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653439.1 ENST00000666561.1 |
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| CDS GCA 72 bp | AGACAATCTTTCCTGGGAGACAGGTCACGCAGCGGTTaGAATAGGTGTGACAAGCTTCCAAGCTATGTGTCG | + |
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Preference number: 6 (lower is better) Translates to: RQSFLGDRSRSG*NRCDKLPSYVS Trigger: CGACACATAGCTTGGAAGCTTGTCACACCTATTGCAACCGCTGCGTGACCTGTCTCCCAGGAAAGATTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653439.1 ENST00000666561.1 |
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| CDS GCA 72 bp | CAGACCCGAAAACTAACTCTGCCCAAGATAACTAGCTaGCCCAGGACTCAGGGCAAACAAACAAACATGCTG | + |
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Preference number: 6 (lower is better) Translates to: QTRKLTLPKITS*PRTQGKQTNML Trigger: CAGCATGTTTGTTTGTTTGCCCTGAGTCCTGGGGCAGCTAGTTATCTTGGGCAGAGTTAGTTTTCGGGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653439.1 ENST00000666561.1 |
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| CDS CCA 72 bp | AAGGACTATCCAGGGAGTTGCAAACTTTGTTGTAAGTaGACAATCACCCTCGCTCCTCACTGCACCGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: KDYPGSCKLCCK*TITLAPHCTVF Trigger: GAAGACGGTGCAGTGAGGAGCGAGGGTGATTGTCCACTTACAACAAAGTTTGCAACTCCCTGGATAGTCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653439.1 ENST00000666561.1 |
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| CDS TCA 72 bp | AGACAAACAGCCTATCGCTGCCTGAAATCGGTGCTTTaGTTCTCAAATGCAGCTACTGGGCAACTCACAGTC | + |
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Preference number: 6 (lower is better) Translates to: RQTAYRCLKSVL*FSNAATGQLTV Trigger: GACTGTGAGTTGCCCAGTAGCTGCATTTGAGAATCAAAGCACCGATTTCAGGCAGCGATAGGCTGTTTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653439.1 |
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| CDS GCA 72 bp | AGCTGCAATGGCTGTGGGAGGGTGGGTATTCCAAACTaGTCAGGTTTTAGCCTTGAGGTGGACATTAATCTT | + |
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Preference number: 6 (lower is better) Translates to: SCNGCGRVGIPN*SGFSLEVDINL Trigger: AAGATTAATGTCCACCTCAAGGCTAAAACCTGAGCAGTTTGGAATACCCACCCTCCCACAGCCATTGCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653439.1 ENST00000666561.1 |
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| CDS CCA 72 bp | GGAAAATTCCAGAATCTGATGGGCTTTGTGGTTCTATaGACCAATGAAAGGCACCAGGCTGCAGAGAACAGG | + |
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Preference number: 6 (lower is better) Translates to: GKFQNLMGFVVL*TNERHQAAENR Trigger: CCTGTTCTCTGCAGCCTGGTGCCTTTCATTGGTCCATAGAACCACAAAGCCCATCAGATTCTGGAATTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653439.1 ENST00000666561.1 |
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| CDS CCA 72 bp | TCATCCCTAAGAATATCTCATGGAGACAATCTTTCCTaGGAGACAGGTCACGCAGCGGTTGCAATAGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: SSLRISHGDNLS*ETGHAAVAIGV Trigger: CACACCTATTGCAACCGCTGCGTGACCTGTCTCCCAGGAAAGATTGTCTCCATGAGATATTCTTAGGGATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653439.1 ENST00000666561.1 |
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| CDS CCA 72 bp | ACGTTTCTCACCGCATTCATCCCTAAGAATATCTCATaGAGACAATCTTTCCTGGGAGACAGGTCACGCAGC | + |
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Preference number: 6 (lower is better) Translates to: TFLTAFIPKNIS*RQSFLGDRSRS Trigger: GCTGCGTGACCTGTCTCCCAGGAAAGATTGTCTCCATGAGATATTCTTAGGGATGAATGCGGTGAGAAACGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653439.1 ENST00000666561.1 |
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| CDS CAA 72 bp | CAGACAAACAGCCTATCGCTGCCTGAAATCGGTGCTTaGATTCTCAAATGCAGCTACTGGGCAACTCACAGT | + |
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Preference number: 6 (lower is better) Translates to: QTNSLSLPEIGA*ILKCSYWATHS Trigger: ACTGTGAGTTGCCCAGTAGCTGCATTTGAGAATCAAAGCACCGATTTCAGGCAGCGATAGGCTGTTTGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653439.1 |
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| CDS GCA 72 bp | ACATATCAGAGCCAGCCATTCAGTCTGAGTTCATCCTaGCTTCTATTCCTTCAGCAGGCGAACATGAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: TYQSQPFSLSSS*LLFLQQANMKA Trigger: TGCTTTCATGTTCGCCTGCTGAAGGAATAGAAGGCAGGATGAACTCAGACTGAATGGCTGGCTCTGATATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653439.1 |
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| CDS CAA 72 bp | TCTCGTGGCGTCAAGCAGGAGTCCATCTGTGTGCCATaGGTGAAATGGTGGTGTTTACTTTGGTTTTCATTC | + |
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Preference number: 6 (lower is better) Translates to: SRGVKQESICVP*VKWWCLLWFSF Trigger: GAATGAAAACCAAAGTAAACACCACCATTTCACCAATGGCACACAGATGGACTCCTGCTTGACGCCACGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653439.1 |
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| CDS TCA 72 bp | GTGGCGTCAAGCAGGAGTCCATCTGTGTGCCATTGGTaGAATGGTGGTGTTTACTTTGGTTTTCATTCAAAC | + |
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Preference number: 6 (lower is better) Translates to: VASSRSPSVCHW*NGGVYFGFHSN Trigger: GTTTGAATGAAAACCAAAGTAAACACCACCATTTCACCAATGGCACACAGATGGACTCCTGCTTGACGCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653439.1 |
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| CDS CCA 72 bp | AGGGAAGATAAATACCAGACAAGGAGCCCAGAGATCTaGGCTTTGATCCCAGCTTTCATCAATTCAGTTCAC | + |
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Preference number: 6 (lower is better) Translates to: REDKYQTRSPEI*ALIPAFINSVH Trigger: GTGAACTGAATTGATGAAAGCTGGGATCAAAGCCCAGATCTCTGGGCTCCTTGTCTGGTATTTATCTTCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000559457.1 ENST00000561458.5 |
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| CDS TCA 72 bp | ATAAATACCAGACAAGGAGCCCAGAGATCTGGGCTTTaGTCCCAGCTTTCATCAATTCAGTTCACAGTTCAC | + |
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Preference number: 6 (lower is better) Translates to: INTRQGAQRSGL*SQLSSIQFTVH Trigger: GTGAACTGTGAACTGAATTGATGAAAGCTGGGATCAAAGCCCAGATCTCTGGGCTCCTTGTCTGGTATTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000559457.1 ENST00000561458.5 |
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| CDS CAA 72 bp | TTGACTCTATTGGTGATTCCCAAATCCGTGCTGGTCTaGATGAGGTTTTCATCTCCATCGTTCCTACTGACA | + |
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Preference number: 6 (lower is better) Translates to: LTLLVIPKSVLV*MRFSSPSFLLT Trigger: TGTCAGTAGGAACGATGGAGATGAAAACCTCATCAAGACCAGCACGGATTTGGGAATCACCAATAGAGTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000559457.1 ENST00000561458.5 |
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| CDS CCA 72 bp | AGAGAAGCTCCTGTTAAAACACAAACACAATCTTGTTaGATAGTAGGGGATTGTCGCAAACTCACACACAGC | + |
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Preference number: 6 (lower is better) Translates to: REAPVKTQTQSC*IVGDCRKLTHS Trigger: GCTGTGTGTGAGTTTGCGACAATCCCCTACTATCCAACAAGATTGTGTTTGTGTTTTAACAGGAGCTTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000653439.1 ENST00000666561.1 |
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| CDS TCA 72 bp | AAGTTCTCACAGCTGGTAAGCTATAGAGATGAGCTTTaGATCAGCATTTGTAACCATACTCTAGTCAGGACT | + |
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Preference number: 6 (lower is better) Translates to: KFSQLVSYRDEL*ISICNHTLVRT Trigger: AGTCCTGACTAGAGTATGGTTACAAATGCTGATTCAAAGCTCATCTCTATAGCTTACCAGCTGTGAGAACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653439.1 ENST00000666561.1 |
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| CDS CCA 72 bp | ATCTGTGTGCCATTGGTGAAATGGTGGTGTTTACTTTaGTTTTCATTCAAACACATATCAGAGCCAGCCATT | + |
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Preference number: 6 (lower is better) Translates to: ICVPLVKWWCLL*FSFKHISEPAI Trigger: AATGGCTGGCTCTGATATGTGTTTGAATGAAAACCAAAGTAAACACCACCATTTCACCAATGGCACACAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653439.1 |
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