RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RYBP (Homo sapiens)

Ensembl gene IDs: ENSG00000163602, ENSG00000281766

Ensembl transcript IDs: ENST00000477973.4, ENST00000628983.2, ENST00000643872.1, ENST00000676660.1, ENST00000676841.1, ENST00000677329.1

Found 317 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAGAACCGCTGGGAGGTCAGGGGCGTGCTAGACCAAGGGCCTCCTaGACGTCCCTTATGTTCTCTTCACTGCCCAAGGTGGAGTCTGGC +
Preference number: 1 (lower is better)
Translates to: PEPLGGQGRARPRAS*TSLMFSSLPKVESG
Trigger: GCCAGACTCCACCTTGGGCAGTGAAGAGAACATAAGGGACGTCCAGGAGGCCCTTGGTCTAGCACGCCCCTGACCTCCCAGCGGTTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR CCA 90 bp TCCTTGCTATGGTTTGAAGGGTTAGGAGTGGCCTTCCAGAACCGCTaGGAGGTCAGGGGCGTGCTAGACCAAGGGCCTCCTGGACGTCCC +
Preference number: 1 (lower is better)
Translates to: SLLWFEGLGVAFQNR*EVRGVLDQGPPGRP
Trigger: GGGACGTCCAGGAGGCCCTTGGTCTAGCACGCCCCTGACCTCCCAGCGGTTCTGGAAGGCCACTCCTAACCCTTCAAACCATAGCAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR GCA 90 bp TACATGCTGCTCGCAGTAAGTACGAGCTTTCCCTGCAACTCTGGCTaGAGGCGCGCAAGCCGTTCACCACTGGAGTTCCTACCACAGCAG +
Preference number: 1 (lower is better)
Translates to: YMLLAVSTSFPCNSG*RRASRSPLEFLPQQ
Trigger: CTGCTGTGGTAGGAACTCCAGTGGTGAACGGCTTGCGCGCCTGCAGCCAGAGTTGCAGGGAAAGCTCGTACTTACTGCGAGCAGCATGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR GCA 90 bp GTGCTAGACCAAGGGCCTCCTGGACGTCCCTTATGTTCTCTTCACTaGCCAAGGTGGAGTCTGGCTGGTTTCCATTTCCACGCCGTAGGG +
Preference number: 1 (lower is better)
Translates to: VLDQGPPGRPLCSLH*PRWSLAGFHFHAVG
Trigger: CCCTACGGCGTGGAAATGGAAACCAGCCAGACTCCACCTTGGGCAGTGAAGAGAACATAAGGGACGTCCAGGAGGCCCTTGGTCTAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR CCA 90 bp AGATTACATGCTGCTCGCAGTAAGTACGAGCTTTCCCTGCAACTCTaGCTGCAGGCGCGCAAGCCGTTCACCACTGGAGTTCCTACCACA +
Preference number: 1 (lower is better)
Translates to: RLHAARSKYELSLQL*LQARKPFTTGVPTT
Trigger: TGTGGTAGGAACTCCAGTGGTGAACGGCTTGCGCGCCTGCAGCCAGAGTTGCAGGGAAAGCTCGTACTTACTGCGAGCAGCATGTAATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR TCA 90 bp GGAGCAGAGAACACAGTAGGAGCACATACACCTCTAATCCCTACTTaGCAACTGAGGGAAATGGCCCGGTCAGCTGACTTGCCCAAGGAC +
Preference number: 1 (lower is better)
Translates to: GAENTVGAHTPLIPT*QLREMARSADLPKD
Trigger: GTCCTTGGGCAAGTCAGCTGACCGGGCCATTTCCCTCAGTTGTCAAGTAGGGATTAGAGGTGTATGTGCTCCTACTGTGTTCTCTGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR GCA 90 bp CCTCCCTTTCCGTCCACACAACTGGAAAGAAACGACTCTTCCTTGTaGCTCCCCTGTAAAGACCAAGTGCTTGCTTTGGTCCACACCTGG +
Preference number: 1 (lower is better)
Translates to: PPFPSTQLERNDSSL*LPCKDQVLALVHTW
Trigger: CCAGGTGTGGACCAAAGCAAGCACTTGGTCTTTACAGGGGAGGCACAAGGAAGAGTCGTTTCTTTCCAGTTGTGTGGACGGAAAGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR GCA 90 bp GCAGGCCTTCAGGTCTGGGGTTCAGGGCTGCATTTAAAGTTACAGTaGTCATCACTGGCCTCACTAAGAATCCCCTGGTCTGACCCTGTT +
Preference number: 1 (lower is better)
Translates to: AGLQVWGSGLHLKLQ*SSLASLRIPWSDPV
Trigger: AACAGGGTCAGACCAGGGGATTCTTAGTGAGGCCAGTGATGAGCACTGTAACTTTAAATGCAGCCCTGAACCCCAGACCTGAAGGCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR CCA 90 bp TTGTGCCTCCCCTGTAAAGACCAAGTGCTTGCTTTGGTCCACACCTaGTATGGGAGACAATTCCCATCCTCCTCCAAAGGATGGTACCAG +
Preference number: 1 (lower is better)
Translates to: LCLPCKDQVLALVHT*YGRQFPSSSKGWYQ
Trigger: CTGGTACCATCCTTTGGAGGAGGATGGGAATTGTCTCCCATACCAGGTGTGGACCAAAGCAAGCACTTGGTCTTTACAGGGGAGGCACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR CCA 90 bp ACGACTCTTCCTTGTGCCTCCCCTGTAAAGACCAAGTGCTTGCTTTaGTCCACACCTGGTATGGGAGACAATTCCCATCCTCCTCCAAAG +
Preference number: 1 (lower is better)
Translates to: TTLPCASPVKTKCLL*STPGMGDNSHPPPK
Trigger: CTTTGGAGGAGGATGGGAATTGTCTCCCATACCAGGTGTGGACCAAAGCAAGCACTTGGTCTTTACAGGGGAGGCACAAGGAAGAGTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR CCA 90 bp TGGACGTCCCTTATGTTCTCTTCACTGCCCAAGGTGGAGTCTGGCTaGTTTCCATTTCCACGCCGTAGGGCTATGAAATCAGAGAGCACA +
Preference number: 1 (lower is better)
Translates to: WTSLMFSSLPKVESG*FPFPRRRAMKSEST
Trigger: TGTGCTCTCTGATTTCATAGCCCTACGGCGTGGAAATGGAAACCAGCCAGACTCCACCTTGGGCAGTGAAGAGAACATAAGGGACGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR TCA 90 bp GTTAGCAGATCGCACGTCTGTATCCAAAATGGCCTGTGGGAAACATaGGAGACCCCATCCAATCCCTGTCCTTCAACCCTTCCAGATCCT +
Preference number: 1 (lower is better)
Translates to: VSRSHVCIQNGLWET*ETPSNPCPSTLPDP
Trigger: AGGATCTGGAAGGGTTGAAGGACAGGGATTGGATGGGGTCTCTCATGTTTCCCACAGGCCATTTTGGATACAGACGTGCGATCTGCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR TCA 90 bp TCTAATGAGGATTCTGAGTCTGGATTCAGCTGGAAAGAAGCGCTGTaGCTGATTAGTGATGTCTGGCACAAGCTGGAGGTGGGTAGGGGG +
Preference number: 1 (lower is better)
Translates to: SNEDSESGFSWKEAL*LISDVWHKLEVGRG
Trigger: CCCCCTACCCACCTCCAGCTTGTGCCAGACATCACTAATCAGTCACAGCGCTTCTTTCCAGCTGAATCCAGACTCAGAATCCTCATTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR TCA 90 bp CCCTTGCTGGCTGAAGTCGTCATTCCACCCTTGATCAAGAATAATTaGGCAAGAGCTGCTTCCATGATCCTGTCACACTCTAGCCATGGG +
Preference number: 1 (lower is better)
Translates to: PLLAEVVIPPLIKNN*ARAASMILSHSSHG
Trigger: CCCATGGCTAGAGTGTGACAGGATCATGGAAGCAGCTCTTGCTCAATTATTCTTGATCAAGGGTGGAATGACGACTTCAGCCAGCAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR TCA 90 bp TTTGATCCTAACACAAAGATAGCTCTAACCTTCCTTGCTATGGTTTaGAGGGTTAGGAGTGGCCTTCCAGAACCGCTGGGAGGTCAGGGG +
Preference number: 1 (lower is better)
Translates to: FDPNTKIALTFLAMV*RVRSGLPEPLGGQG
Trigger: CCCCTGACCTCCCAGCGGTTCTGGAAGGCCACTCCTAACCCTTCAAACCATAGCAAGGAAGGTTAGAGCTATCTTTGTGTTAGGATCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR GCA 90 bp GTGTCAAGAGTAATCGTCAGGGTGCGAAATTCCTTGGTGGCCAGATaGCCATGGCAAGCAGAAATTATCCTGGCAGCATCACTAAGAGGT +
Preference number: 1 (lower is better)
Translates to: VSRVIVRVRNSLVAR*PWQAEIILAASLRG
Trigger: ACCTCTTAGTGATGCTGCCAGGATAATTTCTGCTTGCCATGGGCATCTGGCCACCAAGGAATTTCGCACCCTGACGATTACTCTTGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR GCA 90 bp TGGAAAGAAACGACTCTTCCTTGTGCCTCCCCTGTAAAGACCAAGTaGTTGCTTTGGTCCACACCTGGTATGGGAGACAATTCCCATCCT +
Preference number: 1 (lower is better)
Translates to: WKETTLPCASPVKTK*LLWSTPGMGDNSHP
Trigger: AGGATGGGAATTGTCTCCCATACCAGGTGTGGACCAAAGCAAGCACTTGGTCTTTACAGGGGAGGCACAAGGAAGAGTCGTTTCTTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR CCA 90 bp AGAGTAATCGTCAGGGTGCGAAATTCCTTGGTGGCCAGATGCCCATaGCAAGCAGAAATTATCCTGGCAGCATCACTAAGAGGTCGATGT +
Preference number: 1 (lower is better)
Translates to: RVIVRVRNSLVARCP*QAEIILAASLRGRC
Trigger: ACATCGACCTCTTAGTGATGCTGCCAGGATAATTTCTGCTTGCCATGGGCATCTGGCCACCAAGGAATTTCGCACCCTGACGATTACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR CCA 90 bp AAGGGTTTCCCAGTTATTTGGGGTGGGTTTCGTCCAGGGAAGGAATaGCAAATGGGTTGCACTTCAGGAAGACGTGCTAACAATGAGCTC +
Preference number: 1 (lower is better)
Translates to: KGFPVIWGGFRPGKE*QMGCTSGRRANNEL
Trigger: GAGCTCATTGTTAGCACGTCTTCCTGAAGTGCAACCCATTTGCCATTCCTTCCCTGGACGAAACCCACCCCAAATAACTGGGAAACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR TCA 90 bp GTGGTTTCCAGGAATCATATCCATGTGGTGTTCTACTCTGTTATTTaGGAGCCCCCGGTTGACAGAACCAGTAGGACAGCTTGGGCAAGT +
Preference number: 1 (lower is better)
Translates to: VVSRNHIHVVFYSVI*EPPVDRTSRTAWAS
Trigger: ACTTGCCCAAGCTGTCCTACTGGTTCTGTCAACCGGGGGCTCTCAAATAACAGAGTAGAACACCACATGGATATGATTCCTGGAAACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR GCA 90 bp CCTGTGCCCTCCCCTCCACAAATTCTTCCCTGTTATAACCAGCACTaGACTGATGCACAATTGGGACTGTATAAATGCTTAGGGACTCGA +
Preference number: 1 (lower is better)
Translates to: PVPSPPQILPCYNQH*TDAQLGLYKCLGTR
Trigger: TCGAGTCCCTAAGCATTTATACAGTCCCAATTGTGCATCAGTGCAGTGCTGGTTATAACAGGGAAGAATTTGTGGAGGGGAGGGCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR CCA 90 bp TCCCAGTTATTTGGGGTGGGTTTCGTCCAGGGAAGGAATGGCAAATaGGTTGCACTTCAGGAAGACGTGCTAACAATGAGCTCTAATGAG +
Preference number: 1 (lower is better)
Translates to: SQLFGVGFVQGRNGK*VALQEDVLTMSSNE
Trigger: CTCATTAGAGCTCATTGTTAGCACGTCTTCCTGAAGTGCAACCCATTTGCCATTCCTTCCCTGGACGAAACCCACCCCAAATAACTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR CCA 90 bp GTGTTGATTAAAAACTGCCTTGAAGGGTTTCCCAGTTATTTGGGGTaGGTTTCGTCCAGGGAAGGAATGGCAAATGGGTTGCACTTCAGG +
Preference number: 1 (lower is better)
Translates to: VLIKNCLEGFPSYLG*VSSREGMANGLHFR
Trigger: CCTGAAGTGCAACCCATTTGCCATTCCTTCCCTGGACGAAACCCACCCCAAATAACTGGGAAACCCTTCAAGGCAGTTTTTAATCAACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR TCA 90 bp CTCAGCTGGCCTTCTTGGATTCATGCAGTTCCACAATTGAAGTGTTaGTTAAAAACTGCCTTGAAGGGTTTCCCAGTTATTTGGGGTGGG +
Preference number: 1 (lower is better)
Translates to: LSWPSWIHAVPQLKC*LKTALKGFPVIWGG
Trigger: CCCACCCCAAATAACTGGGAAACCCTTCAAGGCAGTTTTTAATCAACACTTCAATTGTGGAACTGCATGAATCCAAGAAGGCCAGCTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR TCA 90 bp AACACCAAAATGTGGTGCTTCATTACAAATCAGGCTGCCCTCCCGTaGGTCCCTAAAGGTCAAATAAAGAGAGGTAACCTCAAATTCTCA +
Preference number: 1 (lower is better)
Translates to: NTKMWCFITNQAALP*VPKGQIKRGNLKFS
Trigger: TGAGAATTTGAGGTTACCTCTCTTTATTTGACCTTTAGGGACTCACGGGAGGGCAGCCTGATTTGTAATGAAGCACCACATTTTGGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR GCA 90 bp AACTTGCTGTTTTATCAGAACAGACCCATTTTCAACTCAACATCCTaGGCTATTTACACTCTCTTCCTTCCAGTGCTAGTTCAGGTGCAG +
Preference number: 1 (lower is better)
Translates to: NLLFYQNRPIFNSTS*AIYTLFLPVLVQVQ
Trigger: CTGCACCTGAACTAGCACTGGAAGGAAGAGAGTGTAAATAGCGCAGGATGTTGAGTTGAAAATGGGTCTGTTCTGATAAAACAGCAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR GCA 90 bp TTCTTGGATTCATGCAGTTCCACAATTGAAGTGTTGATTAAAAACTaGCTTGAAGGGTTTCCCAGTTATTTGGGGTGGGTTTCGTCCAGG +
Preference number: 1 (lower is better)
Translates to: FLDSCSSTIEVLIKN*LEGFPSYLGWVSSR
Trigger: CCTGGACGAAACCCACCCCAAATAACTGGGAAACCCTTCAAGGCAGTTTTTAATCAACACTTCAATTGTGGAACTGCATGAATCCAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR CCA 90 bp CATTTAAAGTTACAGTGCTCATCACTGGCCTCACTAAGAATCCCCTaGTCTGACCCTGTTTTGAACAGGAAGTTGAACTCTTTGAAGAGT +
Preference number: 1 (lower is better)
Translates to: HLKLQCSSLASLRIP*SDPVLNRKLNSLKS
Trigger: ACTCTTCAAAGAGTTCAACTTCCTGTTCAAAACAGGGTCAGACCAGGGGATTCTTAGTGAGGCCAGTGATGAGCACTGTAACTTTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR GCA 90 bp AAGCCCTGCCCAACTAAACCACTTGTGATTTGTCAGTTATTCCATTaGAAATGCAGGCTATCTGGAGCAGTCTTTAAATTTGAGATCACA +
Preference number: 1 (lower is better)
Translates to: KPCPTKPLVICQLFH*KCRLSGAVFKFEIT
Trigger: TGTGATCTCAAATTTAAAGACTGCTCCAGATAGCCTGCATTTGCAATGGAATAACTGACAAATCACAAGTGGTTTAGTTGGGCAGGGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR GCA 90 bp AGGCACTATCAGGCAGAACATCACACCTGCATGTCTACCTTCACTCCGCAGGCTCCCTGCAACTCTGGCTaGAGGCGCGCAAGCCGTTCA +
Preference number: 2 (lower is better)
Translates to: RHYQAEHHTCMSTFTPQAPCNSG*RRASRS
Trigger: TGAACGGCTTGCGCGCCTGCAGCCAGAGTTGCAGGG...AGCCTGCGGAGTGAAGGTAGACATGCAGGTGTGATGTTCTGCCTGATAGTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR CCA 90 bp GGCTGCAGGCGCGCAAGCCGTTCACCACTGGAGTTCCTACCACAGCAGGGGATTGTGGCCAGATGCCCATaGCAAGCAGAAATTATCCTG +
Preference number: 2 (lower is better)
Translates to: GCRRASRSPLEFLPQQGIVARCP*QAEIIL
Trigger: CAGGATAATTTCTGCTTGCCATGGGCATCTGGCCAC...AATCCCCTGCTGTGGTAGGAACTCCAGTGGTGAACGGCTTGCGCGCCTGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR TCA 90 bp AGGCACTATCAGGCAGAACATCACACCTGCATGTCTACCTTCACTCCGCAGGCTTGGGCCCTTGCTGGCTaGAGTCGTCATTCCACCCTT +
Preference number: 2 (lower is better)
Translates to: RHYQAEHHTCMSTFTPQAWALAG*SRHSTL
Trigger: AAGGGTGGAATGACGACTTCAGCCAGCAAGGGCCCA...AGCCTGCGGAGTGAAGGTAGACATGCAGGTGTGATGTTCTGCCTGATAGTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR GCA 90 bp CACACCTGGTATGGGAGACAATTCCCATCCTCCTCCAAAGGATGGTACCAGTGCAGTACGAGCTTTCCCTaGAACTCTGGCTGCAGGCGC +
Preference number: 2 (lower is better)
Translates to: HTWYGRQFPSSSKGWYQCSTSFP*NSGCRR
Trigger: GCGCCTGCAGCCAGAGTTGCAGGGAAAGCTCGTACT...GCACTGGTACCATCCTTTGGAGGAGGATGGGAATTGTCTCCCATACCAGGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR GCA 90 bp CACACCTGGTATGGGAGACAATTCCCATCCTCCTCCAAAGGATGGTACCAGTGCGTATGCCTCAGCACCTaGAGCAGCAGGCAGGAGTCT +
Preference number: 2 (lower is better)
Translates to: HTWYGRQFPSSSKGWYQCVCLST*SSRQES
Trigger: AGACTCCTGCCTGCTGCTGCAGGTGCTGAGGCATAC...GCACTGGTACCATCCTTTGGAGGAGGATGGGAATTGTCTCCCATACCAGGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR TCA 90 bp AGAGCAAGTCAGGTAAGCTCTGTGTGCGCGCACACGCACGAGTGTGAAAGATTGCAGGCTGCCCTCCCGTaGGTCCCTAAAGGTCAAATA +
Preference number: 2 (lower is better)
Translates to: RASQVSSVCAHTHECERLQAALP*VPKGQI
Trigger: TATTTGACCTTTAGGGACTCACGGGAGGGCAGCCTG...CAATCTTTCACACTCGTGCGTGTGCGCGCACACAGAGCTTACCTGACTTGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR CCA 90 bp AGGCACTATCAGGCAGAACATCACACCTGCATGTCTACCTTCACTCCGCAGGCTTGCGAAATTCCTTGGTaGCCAGATGCCCATGGCAAG +
Preference number: 2 (lower is better)
Translates to: RHYQAEHHTCMSTFTPQACEIPW*PDAHGK
Trigger: CTTGCCATGGGCATCTGGCCACCAAGGAATTTCGCA...AGCCTGCGGAGTGAAGGTAGACATGCAGGTGTGATGTTCTGCCTGATAGTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR CCA 90 bp AGGCACTATCAGGCAGAACATCACACCTGCATGTCTACCTTCACTCCGCAGGCTGGTCCACACCTGGTATaGGAGACAATTCCCATCCTC +
Preference number: 2 (lower is better)
Translates to: RHYQAEHHTCMSTFTPQAGPHLV*ETIPIL
Trigger: GAGGATGGGAATTGTCTCCCATACCAGGTGTGGACC...AGCCTGCGGAGTGAAGGTAGACATGCAGGTGTGATGTTCTGCCTGATAGTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR CAA 90 bp TTGCCTCCCTTTCCGTCCACACAACTGGAAAGAAACGACTCTTCCTaGTGCCTCCCCTGTAAAGACCAAGTGCTTGCTTTGGTCCACACC +
Preference number: 2 (lower is better)
Translates to: LPPFPSTQLERNDSS*CLPCKDQVLALVHT
Trigger: GGTGTGGACCAAAGCAAGCACTTGGTCTTTACAGGGGAGGCACAAGGAAGAGTCGTTTCTTTCCAGTTGTGTGGACGGAAAGGGAGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR CCA 90 bp ACCAGAGCCCTCCTGCAGTATCTAGTTGTCTATGTCCATTGTCCTCTCCTGACACAAGCCGTTCACCACTaGAGTTCCTACCACAGCAGG +
Preference number: 2 (lower is better)
Translates to: TRALLQYLVVYVHCPLLTQAVHH*SSYHSR
Trigger: CCTGCTGTGGTAGGAACTCCAGTGGTGAACGGCTTG...TGTCAGGAGAGGACAATGGACATAGACAACTAGATACTGCAGGAGGGCTCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR CAA 90 bp AACGACTCTTCCTTGTGCCTCCCCTGTAAAGACCAAGTGCTTGCTTaGGTCCACACCTGGTATGGGAGACAATTCCCATCCTCCTCCAAA +
Preference number: 2 (lower is better)
Translates to: NDSSLCLPCKDQVLA*VHTWYGRQFPSSSK
Trigger: TTTGGAGGAGGATGGGAATTGTCTCCCATACCAGGTGTGGACCAAAGCAAGCACTTGGTCTTTACAGGGGAGGCACAAGGAAGAGTCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR CAA 90 bp ATCATATCCATGTGGTGTTCTACTCTGTTATTTGAGAGCCCCCGGTaGACAGAACCAGTAGGACAGCTTGGGCAAGTAGGTCCCGGTCTG +
Preference number: 2 (lower is better)
Translates to: IISMWCSTLLFESPR*TEPVGQLGQVGPGL
Trigger: CAGACCGGGACCTACTTGCCCAAGCTGTCCTACTGGTTCTGTCAACCGGGGGCTCTCAAATAACAGAGTAGAACACCACATGGATATGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR TCA 90 bp CTGCATGACTCAAGCAGAGCAAGTCAGGTAAGCTCTGTGTGCGCGCACACGCACACTGAATCGGTAGAGTaGAGGTTTATCAGACAAAGG +
Preference number: 2 (lower is better)
Translates to: LHDSSRASQVSSVCAHTHTESVE*RFIRQR
Trigger: CCTTTGTCTGATAAACCTTCACTCTACCGATTCAGT...GTGCGTGTGCGCGCACACAGAGCTTACCTGACTTGCTCTGCTTGAGTCATGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR TCA 90 bp CTGCATGACTCAAGCAGAGCAAGTCAGGTAAGCTCTGTGTGCGCGCACACGCACAGTACACAGTGTGTCTaGACAAAGTGCATACCAACA +
Preference number: 2 (lower is better)
Translates to: LHDSSRASQVSSVCAHTHSTQCV*TKCIPT
Trigger: TGTTGGTATGCACTTTGTTCAGACACACTGTGTACT...GTGCGTGTGCGCGCACACAGAGCTTACCTGACTTGCTCTGCTTGAGTCATGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR TCA 90 bp ACCAGAGCCCTCCTGCAGTATCTAGTTGTCTATGTCCATTGTCCTCTCCTGACACAAGAGCTGCTTCCATaGTCCTGTCACACTCTAGCC +
Preference number: 2 (lower is better)
Translates to: TRALLQYLVVYVHCPLLTQELLP*SCHTLA
Trigger: GGCTAGAGTGTGACAGGATCATGGAAGCAGCTCTTG...TGTCAGGAGAGGACAATGGACATAGACAACTAGATACTGCAGGAGGGCTCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR CCA 90 bp CTGCATGACTCAAGCAGAGCAAGTCAGGTAAGCTCTGTGTGCGCGCACACGCACAAGGGACTAGCTTCCTaGATGGACCAAAAATACAGT +
Preference number: 2 (lower is better)
Translates to: LHDSSRASQVSSVCAHTHKGLAS*MDQKYS
Trigger: ACTGTATTTTTGGTCCATCCAGGAAGCTAGTCCCTT...GTGCGTGTGCGCGCACACAGAGCTTACCTGACTTGCTCTGCTTGAGTCATGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR CCA 90 bp CTGCATGACTCAAGCAGAGCAAGTCAGGTAAGCTCTGTGTGCGCGCACACGCACTCAGGACTGGATGTGTaGTTGATAACCTTTGTTCAG +
Preference number: 2 (lower is better)
Translates to: LHDSSRASQVSSVCAHTHSGLDV*LITFVQ
Trigger: CTGAACAAAGGTTATCAACCACACATCCAGTCCTGA...GTGCGTGTGCGCGCACACAGAGCTTACCTGACTTGCTCTGCTTGAGTCATGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR CCA 90 bp ACCAGAGCCCTCCTGCAGTATCTAGTTGTCTATGTCCATTGTCCTCTCCTGACAAAGGTGGAGTCTGGCTaGTTTCCATTTCCACGCCGT +
Preference number: 2 (lower is better)
Translates to: TRALLQYLVVYVHCPLLTKVESG*FPFPRR
Trigger: ACGGCGTGGAAATGGAAACCAGCCAGACTCCACCTT...TGTCAGGAGAGGACAATGGACATAGACAACTAGATACTGCAGGAGGGCTCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR CAA 90 bp AAAGAAACGACTCTTCCTTGTGCCTCCCCTGTAAAGACCAAGTGCTaGCTTTGGTCCACACCTGGTATGGGAGACAATTCCCATCCTCCT +
Preference number: 2 (lower is better)
Translates to: KETTLPCASPVKTKC*LWSTPGMGDNSHPP
Trigger: AGGAGGATGGGAATTGTCTCCCATACCAGGTGTGGACCAAAGCAAGCACTTGGTCTTTACAGGGGAGGCACAAGGAAGAGTCGTTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR CCA 90 bp ACCAGAGCCCTCCTGCAGTATCTAGTTGTCTATGTCCATTGTCCTCTCCTGACAGCTTTGGTCCACACCTaGTATGGGAGACAATTCCCA +
Preference number: 2 (lower is better)
Translates to: TRALLQYLVVYVHCPLLTALVHT*YGRQFP
Trigger: TGGGAATTGTCTCCCATACCAGGTGTGGACCAAAGC...TGTCAGGAGAGGACAATGGACATAGACAACTAGATACTGCAGGAGGGCTCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR CCA 90 bp AGGCACTATCAGGCAGAACATCACACCTGCATGTCTACCTTCACTCCGCAGGCTTTCCGTCCACACAACTaGAAAGAAACGACTCTTCCT +
Preference number: 2 (lower is better)
Translates to: RHYQAEHHTCMSTFTPQAFRPHN*KETTLP
Trigger: AGGAAGAGTCGTTTCTTTCCAGTTGTGTGGACGGAA...AGCCTGCGGAGTGAAGGTAGACATGCAGGTGTGATGTTCTGCCTGATAGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR TCA 90 bp AACCAGAGCCCTCCTGCAGTATCTAGTTGTCTATGTCCATTGTCCTCTCCTGACTTCCTTGCTATGGTTTaGAGGGTTAGGAGTGGCCTT +
Preference number: 2 (lower is better)
Translates to: NQSPPAVSSCLCPLSSPDFLAMV*RVRSGL
Trigger: AAGGCCACTCCTAACCCTTCAAACCATAGCAAGGAA...GTCAGGAGAGGACAATGGACATAGACAACTAGATACTGCAGGAGGGCTCTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR GCA 90 bp ACCAGAGCCCTCCTGCAGTATCTAGTTGTCTATGTCCATTGTCCTCTCCTGACACCTGTAAAGACCAAGTaGTTGCTTTGGTCCACACCT +
Preference number: 2 (lower is better)
Translates to: TRALLQYLVVYVHCPLLTPVKTK*LLWSTP
Trigger: AGGTGTGGACCAAAGCAAGCACTTGGTCTTTACAGG...TGTCAGGAGAGGACAATGGACATAGACAACTAGATACTGCAGGAGGGCTCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR CCA 90 bp AGAGCAAGTCAGGTAAGCTCTGTGTGCGCGCACACGCACGAGTGTGAAAGATTGAGGAACCTTTCCTGTTaGCTACTCAATTCAAGCTGT +
Preference number: 2 (lower is better)
Translates to: RASQVSSVCAHTHECERLRNLSC*LLNSSC
Trigger: ACAGCTTGAATTGAGTAGCCAACAGGAAAGGTTCCT...CAATCTTTCACACTCGTGCGTGTGCGCGCACACAGAGCTTACCTGACTTGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR CCA 90 bp AACCAGAGCCCTCCTGCAGTATCTAGTTGTCTATGTCCATTGTCCTCTCCTGACGTGGGCTTCCTTCAGTaGTTAGCAAACAGAACCTTC +
Preference number: 2 (lower is better)
Translates to: NQSPPAVSSCLCPLSSPDVGFLQ*LANRTF
Trigger: GAAGGTTCTGTTTGCTAACCACTGAAGGAAGCCCAC...GTCAGGAGAGGACAATGGACATAGACAACTAGATACTGCAGGAGGGCTCTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR TCA 90 bp AGGCACTATCAGGCAGAACATCACACCTGCATGTCTACCTTCACTCCGCAGGCTTTAGTTACTTTTGAATaGTCAAAGCCCTGCCCAACT +
Preference number: 2 (lower is better)
Translates to: RHYQAEHHTCMSTFTPQALVTFE*SKPCPT
Trigger: AGTTGGGCAGGGCTTTGATCATTCAAAAGTAACTAA...AGCCTGCGGAGTGAAGGTAGACATGCAGGTGTGATGTTCTGCCTGATAGTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR GCA 90 bp CACACCTGGTATGGGAGACAATTCCCATCCTCCTCCAAAGGATGGTACCAGTGCAGTGTTTTTACACGCTaGCTACTAATTGTAGGGCAT +
Preference number: 2 (lower is better)
Translates to: HTWYGRQFPSSSKGWYQCSVFTR*LLIVGH
Trigger: ATGCCCTACAATTAGTAGGCAGCGTGTAAAAACACT...GCACTGGTACCATCCTTTGGAGGAGGATGGGAATTGTCTCCCATACCAGGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR GCA 90 bp CACACCTGGTATGGGAGACAATTCCCATCCTCCTCCAAAGGATGGTACCAGTGCTTCAACTCAACATCCTaGGCTATTTACACTCTCTTC +
Preference number: 2 (lower is better)
Translates to: HTWYGRQFPSSSKGWYQCFNSTS*AIYTLF
Trigger: GAAGAGAGTGTAAATAGCGCAGGATGTTGAGTTGAA...GCACTGGTACCATCCTTTGGAGGAGGATGGGAATTGTCTCCCATACCAGGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR CCA 90 bp CTGCATGACTCAAGCAGAGCAAGTCAGGTAAGCTCTGTGTGCGCGCACACGCACATTTACACGAATACTTaGCATTCTGGAGCTACTTTA +
Preference number: 2 (lower is better)
Translates to: LHDSSRASQVSSVCAHTHIYTNT*HSGATL
Trigger: TAAAGTAGCTCCAGAATGCCAAGTATTCGTGTAAAT...GTGCGTGTGCGCGCACACAGAGCTTACCTGACTTGCTCTGCTTGAGTCATGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR CCA 90 bp CTGCATGACTCAAGCAGAGCAAGTCAGGTAAGCTCTGTGTGCGCGCACACGCACTTTTCCACTAATCTATaGGGTCCAATCACTTTACAT +
Preference number: 2 (lower is better)
Translates to: LHDSSRASQVSSVCAHTHFSTNL*GPITLH
Trigger: ATGTAAAGTGATTGGACCCCATAGATTAGTGGAAAA...GTGCGTGTGCGCGCACACAGAGCTTACCTGACTTGCTCTGCTTGAGTCATGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR CAA 90 bp GAATACATAAAAGTGTCAAGAGTAATCGTCAGGGTGCGAAATTCCTaGGTGGCCAGATGCCCATGGCAAGCAGAAATTATCCTGGCAGCA +
Preference number: 2 (lower is better)
Translates to: EYIKVSRVIVRVRNS*VARCPWQAEIILAA
Trigger: TGCTGCCAGGATAATTTCTGCTTGCCATGGGCATCTGGCCACCAAGGAATTTCGCACCCTGACGATTACTCTTGACACTTTTATGTATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR TCA 90 bp AGAGCAAGTCAGGTAAGCTCTGTGTGCGCGCACACGCACGAGTGTGAAAGATTGCTTAAAAGGATATGCTaGAAGGATGGAGTTTGTGAA +
Preference number: 2 (lower is better)
Translates to: RASQVSSVCAHTHECERLLKRIC*KDGVCE
Trigger: TTCACAAACTCCATCCTTTCAGCATATCCTTTTAAG...CAATCTTTCACACTCGTGCGTGTGCGCGCACACAGAGCTTACCTGACTTGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR CAA 90 bp ATTGAAGTGTTGATTAAAAACTGCCTTGAAGGGTTTCCCAGTTATTaGGGGTGGGTTTCGTCCAGGGAAGGAATGGCAAATGGGTTGCAC +
Preference number: 2 (lower is better)
Translates to: IEVLIKNCLEGFPSY*GWVSSREGMANGLH
Trigger: GTGCAACCCATTTGCCATTCCTTCCCTGGACGAAACCCACCCCAAATAACTGGGAAACCCTTCAAGGCAGTTTTTAATCAACACTTCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR CAA 90 bp AATCGGGGATGGATCTTGACATGTTTTAAGTGGTTTCTTAATTCTTaGGAAGGTTATAGACTGGTATGCCTCAGCACCTGCAGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: NRGWILTCFKWFLNS*EGYRLVCLSTCSSR
Trigger: CCTGCTGCTGCAGGTGCTGAGGCATACCAGTCTATAACCTTCCAAAGAATTAAGAAACCACTTAAAACATGTCAAGATCCATCCCCGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR CAA 90 bp TCTCAGCTGGCCTTCTTGGATTCATGCAGTTCCACAATTGAAGTGTaGATTAAAAACTGCCTTGAAGGGTTTCCCAGTTATTTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: SQLAFLDSCSSTIEV*IKNCLEGFPSYLGW
Trigger: CCACCCCAAATAACTGGGAAACCCTTCAAGGCAGTTTTTAATCAACACTTCAATTGTGGAACTGCATGAATCCAAGAAGGCCAGCTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR CCA 90 bp AACCAGAGCCCTCCTGCAGTATCTAGTTGTCTATGTCCATTGTCCTCTCCTGACCATACCAACAGTTATTaGTTCAATAAGCAGTGCAAC +
Preference number: 2 (lower is better)
Translates to: NQSPPAVSSCLCPLSSPDHTNSY*FNKQCN
Trigger: GTTGCACTGCTTATTGAACCAATAACTGTTGGTATG...GTCAGGAGAGGACAATGGACATAGACAACTAGATACTGCAGGAGGGCTCTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR CCA 90 bp AGAAACGTCAAGCAGGTGTCAAAAATCCCACTGGACTTTATTTACATGCAGGCTCTGAGGGGCCAAACTTaGGTCACGTTCAGTACTAAA +
Preference number: 2 (lower is better)
Translates to: RNVKQVSKIPLDFIYMQALRGQT*VTFSTK
Trigger: TTTAGTACTGAACGTGACCCAAGTTTGGCCCCTCAG...AGCCTGCATGTAAATAAAGTCCAGTGGGATTTTTGACACCTGCTTGACGTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR CCA 90 bp AGAAACGTCAAGCAGGTGTCAAAAATCCCACTGGACTTTATTTACATGCAGGCTGGAAGGAATGGCAAATaGGTTGCACTTCAGGAAGAC +
Preference number: 2 (lower is better)
Translates to: RNVKQVSKIPLDFIYMQAGRNGK*VALQED
Trigger: GTCTTCCTGAAGTGCAACCCATTTGCCATTCCTTCC...AGCCTGCATGTAAATAAAGTCCAGTGGGATTTTTGACACCTGCTTGACGTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR CCA 90 bp AGAAACGTCAAGCAGGTGTCAAAAATCCCACTGGACTTTATTTACATGCAGGCTCAGCCTATGAGTAGCTaGTTAATCAGCTTTTTCCAC +
Preference number: 2 (lower is better)
Translates to: RNVKQVSKIPLDFIYMQAQPMSS*LISFFH
Trigger: GTGGAAAAAGCTGATTAACCAGCTACTCATAGGCTG...AGCCTGCATGTAAATAAAGTCCAGTGGGATTTTTGACACCTGCTTGACGTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR GCA 90 bp AGAAACGTCAAGCAGGTGTCAAAAATCCCACTGGACTTTATTTACATGCAGGCTCATTTCCAGAATACATaGCTGAGGGATGTCATCAAT +
Preference number: 2 (lower is better)
Translates to: RNVKQVSKIPLDFIYMQAHFQNT*LRDVIN
Trigger: ATTGATGACATCCCTCAGGCATGTATTCTGGAAATG...AGCCTGCATGTAAATAAAGTCCAGTGGGATTTTTGACACCTGCTTGACGTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR GCA 90 bp AGAAACGTCAAGCAGGTGTCAAAAATCCCACTGGACTTTATTTACATGCAGGCTCATTTAAAGTTACAGTaGTCATCACTGGCCTCACTA +
Preference number: 2 (lower is better)
Translates to: RNVKQVSKIPLDFIYMQAHLKLQ*SSLASL
Trigger: TAGTGAGGCCAGTGATGAGCACTGTAACTTTAAATG...AGCCTGCATGTAAATAAAGTCCAGTGGGATTTTTGACACCTGCTTGACGTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR CCA 90 bp AGAAACGTCAAGCAGGTGTCAAAAATCCCACTGGACTTTATTTACATGCAGGCTGTTAACACTAGAGTTTaGCTGAGGATTAGAGAAAAC +
Preference number: 2 (lower is better)
Translates to: RNVKQVSKIPLDFIYMQAVNTRV*LRIREN
Trigger: GTTTTCTCTAATCCTCAGCCAAACTCTAGTGTTAAC...AGCCTGCATGTAAATAAAGTCCAGTGGGATTTTTGACACCTGCTTGACGTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR TCA 90 bp AGCTTCCTGGATGGACCAAAAATACAGTTTATAGACTGTTTCAATCCTAAAACTGGCAGGTGGAGGTTTTaGATTTCATACCCTGATTCA +
Preference number: 2 (lower is better)
Translates to: SFLDGPKIQFIDCFNPKTGRWRF*ISYPDS
Trigger: TGAATCAGGGTATGAAATTCAAAACCTCCACCTGCC...AGTTTTAGGATTGAAACAGTCTATAAACTGTATTTTTGGTCCATCCAGGAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR CCA 90 bp AGAAACGTCAAGCAGGTGTCAAAAATCCCACTGGACTTTATTTACATGCAGGCTTACAAGCTGTCTTTCTaGGCAAATGAAAAATATAGC +
Preference number: 2 (lower is better)
Translates to: RNVKQVSKIPLDFIYMQAYKLSF*ANEKYS
Trigger: GCTATATTTTTCATTTGCCCAGAAAGACAGCTTGTA...AGCCTGCATGTAAATAAAGTCCAGTGGGATTTTTGACACCTGCTTGACGTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR CCA 72 bp TGGTTTGAAGGGTTAGGAGTGGCCTTCCAGAACCGCTaGGAGGTCAGGGGCGTGCTAGACCAAGGGCCTCCT +
Preference number: 3 (lower is better)
Translates to: WFEGLGVAFQNR*EVRGVLDQGPP
Trigger: AGGAGGCCCTTGGTCTAGCACGCCCCTGACCTCCCAGCGGTTCTGGAAGGCCACTCCTAACCCTTCAAACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR CCA 72 bp GCTGCTCGCAGTAAGTACGAGCTTTCCCTGCAACTCTaGCTGCAGGCGCGCAAGCCGTTCACCACTGGAGTT +
Preference number: 3 (lower is better)
Translates to: AARSKYELSLQL*LQARKPFTTGV
Trigger: AACTCCAGTGGTGAACGGCTTGCGCGCCTGCAGCCAGAGTTGCAGGGAAAGCTCGTACTTACTGCGAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR CCA 72 bp CAAGTAGGTCCCGGTCTGGCCTGTAGGGTAAGACACTaGCAGGCCTTCAGGTCTGGGGTTCAGGGCTGCATT +
Preference number: 3 (lower is better)
Translates to: QVGPGLACRVRH*QAFRSGVQGCI
Trigger: AATGCAGCCCTGAACCCCAGACCTGAAGGCCTGCCAGTGTCTTACCCTACAGGCCAGACCGGGACCTACTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR GCA 72 bp CTCGCAGTAAGTACGAGCTTTCCCTGCAACTCTGGCTaGAGGCGCGCAAGCCGTTCACCACTGGAGTTCCTA +
Preference number: 3 (lower is better)
Translates to: LAVSTSFPCNSG*RRASRSPLEFL
Trigger: TAGGAACTCCAGTGGTGAACGGCTTGCGCGCCTGCAGCCAGAGTTGCAGGGAAAGCTCGTACTTACTGCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR CCA 72 bp GCAACTCTGGCTGCAGGCGCGCAAGCCGTTCACCACTaGAGTTCCTACCACAGCAGGGGATTGAGAAATGTC +
Preference number: 3 (lower is better)
Translates to: ATLAAGAQAVHH*SSYHSRGLRNV
Trigger: GACATTTCTCAATCCCCTGCTGTGGTAGGAACTCCAGTGGTGAACGGCTTGCGCGCCTGCAGCCAGAGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR CCA 72 bp TGGTATGGGAGACAATTCCCATCCTCCTCCAAAGGATaGTACCAGTGCCACCAGCAGTGGGGGCCCTCACAG +
Preference number: 3 (lower is better)
Translates to: WYGRQFPSSSKG*YQCHQQWGPSQ
Trigger: CTGTGAGGGCCCCCACTGCTGGTGGCACTGGTACCATCCTTTGGAGGAGGATGGGAATTGTCTCCCATACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR GCA 72 bp GATTACATGCTGCTCGCAGTAAGTACGAGCTTTCCCTaGAACTCTGGCTGCAGGCGCGCAAGCCGTTCACCA +
Preference number: 3 (lower is better)
Translates to: DYMLLAVSTSFP*NSGCRRASRSP
Trigger: TGGTGAACGGCTTGCGCGCCTGCAGCCAGAGTTGCAGGGAAAGCTCGTACTTACTGCGAGCAGCATGTAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR GCA 72 bp CCTGGAGAGAGGCACTATCAGGCAGAACATCACACCTaGATGTCTACCTTCACTCCGCAGGCTTCCAGACAC +
Preference number: 3 (lower is better)
Translates to: PGERHYQAEHHT*MSTFTPQASRH
Trigger: GTGTCTGGAAGCCTGCGGAGTGAAGGTAGACATGCAGGTGTGATGTTCTGCCTGATAGTGCCTCTCTCCAGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR CAA 90 bp GGCTGCAGGCGCGCAAGCCGTTCACCACTGGAGTTCCTACCACAGCAGGGGATTTTGTCAGTTATTCCATaGCAAATGCAGGCTATCTGG +
Preference number: 3 (lower is better)
Translates to: GCRRASRSPLEFLPQQGILSVIP*QMQAIW
Trigger: CCAGATAGCCTGCATTTGCAATGGAATAACTGACAA...AATCCCCTGCTGTGGTAGGAACTCCAGTGGTGAACGGCTTGCGCGCCTGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR CAA 90 bp AGGCACTATCAGGCAGAACATCACACCTGCATGTCTACCTTCACTCCGCAGGCTGACCAAGTGCTTGCTTaGGTCCACACCTGGTATGGG +
Preference number: 3 (lower is better)
Translates to: RHYQAEHHTCMSTFTPQADQVLA*VHTWYG
Trigger: CCCATACCAGGTGTGGACCAAAGCAAGCACTTGGTC...AGCCTGCGGAGTGAAGGTAGACATGCAGGTGTGATGTTCTGCCTGATAGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR GCA 72 bp CATGACTCAAGCAGAGCAAGTCAGGTAAGCTCTGTGTaGGCGCACACGCACGAGTGTGAAAGATTGCGTGGT +
Preference number: 3 (lower is better)
Translates to: HDSSRASQVSSV*AHTHECERLRG
Trigger: ACCACGCAATCTTTCACACTCGTGCGTGTGCGCGCACACAGAGCTTACCTGACTTGCTCTGCTTGAGTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR CCA 72 bp CCTTGTGCCTCCCCTGTAAAGACCAAGTGCTTGCTTTaGTCCACACCTGGTATGGGAGACAATTCCCATCCT +
Preference number: 3 (lower is better)
Translates to: PCASPVKTKCLL*STPGMGDNSHP
Trigger: AGGATGGGAATTGTCTCCCATACCAGGTGTGGACCAAAGCAAGCACTTGGTCTTTACAGGGGAGGCACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR CAA 90 bp AGGCACTATCAGGCAGAACATCACACCTGCATGTCTACCTTCACTCCGCAGGCTAGTTGTCTATGTCCATaGTCCTCTCCTGACAGAAGC +
Preference number: 3 (lower is better)
Translates to: RHYQAEHHTCMSTFTPQASCLCP*SSPDRS
Trigger: GCTTCTGTCAGGAGAGGACAATGGACATAGACAACT...AGCCTGCGGAGTGAAGGTAGACATGCAGGTGTGATGTTCTGCCTGATAGTGCCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR TCA 72 bp TCGCACGTCTGTATCCAAAATGGCCTGTGGGAAACATaGGAGACCCCATCCAATCCCTGTCCTTCAACCCTT +
Preference number: 3 (lower is better)
Translates to: SHVCIQNGLWET*ETPSNPCPSTL
Trigger: AAGGGTTGAAGGACAGGGATTGGATGGGGTCTCTCATGTTTCCCACAGGCCATTTTGGATACAGACGTGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR TCA 72 bp CTGAGTCTGGATTCAGCTGGAAAGAAGCGCTGTGACTaGTTAGTGATGTCTGGCACAAGCTGGAGGTGGGTA +
Preference number: 3 (lower is better)
Translates to: LSLDSAGKKRCD*LVMSGTSWRWV
Trigger: TACCCACCTCCAGCTTGTGCCAGACATCACTAATCAGTCACAGCGCTTCTTTCCAGCTGAATCCAGACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR GCA 72 bp CCGTCCACACAACTGGAAAGAAACGACTCTTCCTTGTaGCTCCCCTGTAAAGACCAAGTGCTTGCTTTGGTC +
Preference number: 3 (lower is better)
Translates to: PSTQLERNDSSL*LPCKDQVLALV
Trigger: GACCAAAGCAAGCACTTGGTCTTTACAGGGGAGGCACAAGGAAGAGTCGTTTCTTTCCAGTTGTGTGGACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR CCA 72 bp GTCAGGGTGCGAAATTCCTTGGTGGCCAGATGCCCATaGCAAGCAGAAATTATCCTGGCAGCATCACTAAGA +
Preference number: 3 (lower is better)
Translates to: VRVRNSLVARCP*QAEIILAASLR
Trigger: TCTTAGTGATGCTGCCAGGATAATTTCTGCTTGCCATGGGCATCTGGCCACCAAGGAATTTCGCACCCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR CCA 72 bp CCCTGTAAAGACCAAGTGCTTGCTTTGGTCCACACCTaGTATGGGAGACAATTCCCATCCTCCTCCAAAGGA +
Preference number: 3 (lower is better)
Translates to: PCKDQVLALVHT*YGRQFPSSSKG
Trigger: TCCTTTGGAGGAGGATGGGAATTGTCTCCCATACCAGGTGTGGACCAAAGCAAGCACTTGGTCTTTACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR CCA 72 bp TTTGGGGTGGGTTTCGTCCAGGGAAGGAATGGCAAATaGGTTGCACTTCAGGAAGACGTGCTAACAATGAGC +
Preference number: 3 (lower is better)
Translates to: FGVGFVQGRNGK*VALQEDVLTMS
Trigger: GCTCATTGTTAGCACGTCTTCCTGAAGTGCAACCCATTTGCCATTCCTTCCCTGGACGAAACCCACCCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR CCA 72 bp CCAGTTATTTGGGGTGGGTTTCGTCCAGGGAAGGAATaGCAAATGGGTTGCACTTCAGGAAGACGTGCTAAC +
Preference number: 3 (lower is better)
Translates to: PVIWGGFRPGKE*QMGCTSGRRAN
Trigger: GTTAGCACGTCTTCCTGAAGTGCAACCCATTTGCCATTCCTTCCCTGGACGAAACCCACCCCAAATAACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR TCA 72 bp CAGCAGGCAGGAGTCTCCCTCGCATGGGGCAATAAGTaGGCTTGTGTGGCTTTTAGGTTAGTAACACACTTT +
Preference number: 3 (lower is better)
Translates to: QQAGVSLAWGNK*ACVAFRLVTHF
Trigger: AAAGTGTGTTACTAACCTAAAAGCCACACAAGCTCACTTATTGCCCCATGCGAGGGAGACTCCTGCCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR TCA 72 bp GATTCTGAGTCTGGATTCAGCTGGAAAGAAGCGCTGTaGCTGATTAGTGATGTCTGGCACAAGCTGGAGGTG +
Preference number: 3 (lower is better)
Translates to: DSESGFSWKEAL*LISDVWHKLEV
Trigger: CACCTCCAGCTTGTGCCAGACATCACTAATCAGTCACAGCGCTTCTTTCCAGCTGAATCCAGACTCAGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR TCA 72 bp AACACAGTAGGAGCACATACACCTCTAATCCCTACTTaGCAACTGAGGGAAATGGCCCGGTCAGCTGACTTG +
Preference number: 3 (lower is better)
Translates to: NTVGAHTPLIPT*QLREMARSADL
Trigger: CAAGTCAGCTGACCGGGCCATTTCCCTCAGTTGTCAAGTAGGGATTAGAGGTGTATGTGCTCCTACTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR TCA 72 bp AACACAAAGATAGCTCTAACCTTCCTTGCTATGGTTTaGAGGGTTAGGAGTGGCCTTCCAGAACCGCTGGGA +
Preference number: 3 (lower is better)
Translates to: NTKIALTFLAMV*RVRSGLPEPLG
Trigger: TCCCAGCGGTTCTGGAAGGCCACTCCTAACCCTTCAAACCATAGCAAGGAAGGTTAGAGCTATCTTTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR GCA 72 bp GCTCTGTGTGCGCGCACACGCACGAGTGTGAAAGATTaGGTGGTATTAAAACAAATGGAAACTTGCAAGCGT +
Preference number: 3 (lower is better)
Translates to: ALCARTRTSVKD*VVLKQMETCKR
Trigger: ACGCTTGCAAGTTTCCATTTGTTTTAATACCACGCAATCTTTCACACTCGTGCGTGTGCGCGCACACAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR CCA 72 bp AAAAACTGCCTTGAAGGGTTTCCCAGTTATTTGGGGTaGGTTTCGTCCAGGGAAGGAATGGCAAATGGGTTG +
Preference number: 3 (lower is better)
Translates to: KNCLEGFPSYLG*VSSREGMANGL
Trigger: CAACCCATTTGCCATTCCTTCCCTGGACGAAACCCACCCCAAATAACTGGGAAACCCTTCAAGGCAGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR CAA 90 bp AACCAGAGCCCTCCTGCAGTATCTAGTTGTCTATGTCCATTGTCCTCTCCTGACTATCAAGCACCAGCGTaGCCATGGATTGGTTTCAAA +
Preference number: 3 (lower is better)
Translates to: NQSPPAVSSCLCPLSSPDYQAPA*PWIGFK
Trigger: TTTGAAACCAATCCATGGCAACGCTGGTGCTTGATA...GTCAGGAGAGGACAATGGACATAGACAACTAGATACTGCAGGAGGGCTCTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR CAA 90 bp AGGCACTATCAGGCAGAACATCACACCTGCATGTCTACCTTCACTCCGCAGGCTCAAGAACAGAACTGCTaGCGCATTAAAAACTGTTCA +
Preference number: 3 (lower is better)
Translates to: RHYQAEHHTCMSTFTPQAQEQNC*RIKNCS
Trigger: TGAACAGTTTTTAATGCGCAAGCAGTTCTGTTCTTG...AGCCTGCGGAGTGAAGGTAGACATGCAGGTGTGATGTTCTGCCTGATAGTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR TCA 72 bp ATGTGGTGCTTCATTACAAATCAGGCTGCCCTCCCGTaGGTCCCTAAAGGTCAAATAAAGAGAGGTAACCTC +
Preference number: 3 (lower is better)
Translates to: MWCFITNQAALP*VPKGQIKRGNL
Trigger: GAGGTTACCTCTCTTTATTTGACCTTTAGGGACTCACGGGAGGGCAGCCTGATTTGTAATGAAGCACCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR TCA 72 bp TGTCCTTCAACCCTTCCAGATCCTTTCCAAGACTTCTaGGGGGCCAAACTTGGGTCACGTTCAGTACTAAAA +
Preference number: 3 (lower is better)
Translates to: CPSTLPDPFQDF*GAKLGSRSVLK
Trigger: TTTTAGTACTGAACGTGACCCAAGTTTGGCCCCTCAGAAGTCTTGGAAAGGATCTGGAAGGGTTGAAGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR TCA 72 bp GTGCTCATCACTGGCCTCACTAAGAATCCCCTGGTCTaGCCCTGTTTTGAACAGGAAGTTGAACTCTTTGAA +
Preference number: 3 (lower is better)
Translates to: VLITGLTKNPLV*PCFEQEVELFE
Trigger: TTCAAAGAGTTCAACTTCCTGTTCAAAACAGGGTCAGACCAGGGGATTCTTAGTGAGGCCAGTGATGAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR TCA 72 bp AGGAATCATATCCATGTGGTGTTCTACTCTGTTATTTaGGAGCCCCCGGTTGACAGAACCAGTAGGACAGCT +
Preference number: 3 (lower is better)
Translates to: RNHIHVVFYSVI*EPPVDRTSRTA
Trigger: AGCTGTCCTACTGGTTCTGTCAACCGGGGGCTCTCAAATAACAGAGTAGAACACCACATGGATATGATTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR CCA 72 bp CACCTAGTTCTGTGGTTTCCAGGAATCATATCCATGTaGTGTTCTACTCTGTTATTTGAGAGCCCCCGGTTG +
Preference number: 3 (lower is better)
Translates to: HLVLWFPGIISM*CSTLLFESPRL
Trigger: CAACCGGGGGCTCTCAAATAACAGAGTAGAACACCACATGGATATGATTCCTGGAAACCACAGAACTAGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR TCA 72 bp GGATCTGGACACTTGGTGTTAACACTAGAGTTTGGCTaGGGATTAGAGAAAACCTTTTTGCCTCCCTTTCCG +
Preference number: 3 (lower is better)
Translates to: GSGHLVLTLEFG*GLEKTFLPPFP
Trigger: CGGAAAGGGAGGCAAAAAGGTTTTCTCTAATCCTCAGCCAAACTCTAGTGTTAACACCAAGTGTCCAGATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR TCA 72 bp GCTGAAGTCGTCATTCCACCCTTGATCAAGAATAATTaGGCAAGAGCTGCTTCCATGATCCTGTCACACTCT +
Preference number: 3 (lower is better)
Translates to: AEVVIPPLIKNN*ARAASMILSHS
Trigger: AGAGTGTGACAGGATCATGGAAGCAGCTCTTGCTCAATTATTCTTGATCAAGGGTGGAATGACGACTTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR-3UTR CAA 90 bp ACCAGAGCCCTCCTGCAGTATCTAGTTGTCTATGTCCATTGTCCTCTCCTGACACCTTCCTTTACATCATaGCAATCTATCTCAAAGGTT +
Preference number: 3 (lower is better)
Translates to: TRALLQYLVVYVHCPLLTPSFTS*QSISKV
Trigger: AACCTTTGAGATAGATTGCAATGATGTAAAGGAAGG...TGTCAGGAGAGGACAATGGACATAGACAACTAGATACTGCAGGAGGGCTCTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR CCA 72 bp ATGATCCTGTCACACTCTAGCCATGGGATTTCTCAATaGGGATCTGGACACTTGGTGTTAACACTAGAGTTT +
Preference number: 3 (lower is better)
Translates to: MILSHSSHGISQ*GSGHLVLTLEF
Trigger: AAACTCTAGTGTTAACACCAAGTGTCCAGATCCCCATTGAGAAATCCCATGGCTAGAGTGTGACAGGATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR GCA 72 bp TGTTTTTACACGCTGCCTACTAATTGTAGGGCATACTaGAGACACAGGAAGTTACAGGAATTCCATTTCCAG +
Preference number: 3 (lower is better)
Translates to: CFYTLPTNCRAY*RHRKLQEFHFQ
Trigger: CTGGAAATGGAATTCCTGTAACTTCCTGTGTCTGCAGTATGCCCTACAATTAGTAGGCAGCGTGTAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR GCA 72 bp TCCCCTCCACAAATTCTTCCCTGTTATAACCAGCACTaGACTGATGCACAATTGGGACTGTATAAATGCTTA +
Preference number: 3 (lower is better)
Translates to: SPPQILPCYNQH*TDAQLGLYKCL
Trigger: TAAGCATTTATACAGTCCCAATTGTGCATCAGTGCAGTGCTGGTTATAACAGGGAAGAATTTGTGGAGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR GCA 72 bp TCATGCAGTTCCACAATTGAAGTGTTGATTAAAAACTaGCTTGAAGGGTTTCCCAGTTATTTGGGGTGGGTT +
Preference number: 3 (lower is better)
Translates to: SCSSTIEVLIKN*LEGFPSYLGWV
Trigger: AACCCACCCCAAATAACTGGGAAACCCTTCAAGGCAGTTTTTAATCAACACTTCAATTGTGGAACTGCATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR TCA 72 bp TTGAATGATCAAAGCCCTGCCCAACTAAACCACTTGTaGTTTGTCAGTTATTCCATTGCAAATGCAGGCTAT +
Preference number: 3 (lower is better)
Translates to: LNDQSPAQLNHL*FVSYSIANAGY
Trigger: ATAGCCTGCATTTGCAATGGAATAACTGACAAATCACAAGTGGTTTAGTTGGGCAGGGCTTTGATCATTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR GCA 72 bp TTTTATCAGAACAGACCCATTTTCAACTCAACATCCTaGGCTATTTACACTCTCTTCCTTCCAGTGCTAGTT +
Preference number: 3 (lower is better)
Translates to: FYQNRPIFNSTS*AIYTLFLPVLV
Trigger: AACTAGCACTGGAAGGAAGAGAGTGTAAATAGCGCAGGATGTTGAGTTGAAAATGGGTCTGTTCTGATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR CCA 72 bp ACAGTGTGTCTGAACAAAGTGCATACCAACAGTTATTaGTTCAATAAGCAGTGCAACCTACATGAGTTTGGT +
Preference number: 3 (lower is better)
Translates to: TVCLNKVHTNSY*FNKQCNLHEFG
Trigger: ACCAAACTCATGTAGGTTGCACTGCTTATTGAACCAATAACTGTTGGTATGCACTTTGTTCAGACACACTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR GCA 72 bp GTTGTATTCACTTCACAGTGTATCAAGCACCAGCGTTaGCATGGATTGGTTTCAAATAACCCTTTATATATA +
Preference number: 3 (lower is better)
Translates to: VVFTSQCIKHQR*HGLVSNNPLYI
Trigger: TATATATAAAGGGTTATTTGAAACCAATCCATGGCAACGCTGGTGCTTGATACACTGTGAAGTGAATACAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR GCA 72 bp CCAACTAAACCACTTGTGATTTGTCAGTTATTCCATTaGAAATGCAGGCTATCTGGAGCAGTCTTTAAATTT +
Preference number: 3 (lower is better)
Translates to: PTKPLVICQLFH*KCRLSGAVFKF
Trigger: AAATTTAAAGACTGCTCCAGATAGCCTGCATTTGCAATGGAATAACTGACAAATCACAAGTGGTTTAGTTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp GGCTGCAGGCGCGCAAGCCGTTCACCACTGGAGTTCCTACCACAGCAGGGGATTATGTCTGGCACAAGCTaGAGGTGGGTAGGGGGACGG +
Preference number: 4 (lower is better)
Translates to: GCRRASRSPLEFLPQQGIMSGTS*RWVGGR
Trigger: CCGTCCCCCTACCCACCTCCAGCTTGTGCCAGACAT...AATCCCCTGCTGTGGTAGGAACTCCAGTGGTGAACGGCTTGCGCGCCTGCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR GCA 90 bp GGCTGCAGGCGCGCAAGCCGTTCACCACTGGAGTTCCTACCACAGCAGGGGATTCAGGTAAGCTCTGTGTaGGCGCACACGCACGAGTGT +
Preference number: 4 (lower is better)
Translates to: GCRRASRSPLEFLPQQGIQVSSV*AHTHEC
Trigger: ACACTCGTGCGTGTGCGCGCACACAGAGCTTACCTG...AATCCCCTGCTGTGGTAGGAACTCCAGTGGTGAACGGCTTGCGCGCCTGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR GCA 90 bp GGCTGCAGGCGCGCAAGCCGTTCACCACTGGAGTTCCTACCACAGCAGGGGATTGAGCTGCTCTGGTTCTaGTGTTCTGACCCTGCACTG +
Preference number: 4 (lower is better)
Translates to: GCRRASRSPLEFLPQQGIELLWF*CSDPAL
Trigger: CAGTGCAGGGTCAGAACAGCAGAACCAGAGCAGCTC...AATCCCCTGCTGTGGTAGGAACTCCAGTGGTGAACGGCTTGCGCGCCTGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR TCA 90 bp GGCTGCAGGCGCGCAAGCCGTTCACCACTGGAGTTCCTACCACAGCAGGGGATTTTTCAGCCGGGGCCTTaGGGTGTGATTTGTTTCGCT +
Preference number: 4 (lower is better)
Translates to: GCRRASRSPLEFLPQQGIFQPGP*GVICFA
Trigger: AGCGAAACAAATCACACCTCAAGGCCCCGGCTGAAA...AATCCCCTGCTGTGGTAGGAACTCCAGTGGTGAACGGCTTGCGCGCCTGCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp GGCTGCAGGCGCGCAAGCCGTTCACCACTGGAGTTCCTACCACAGCAGGGGATTAGACCAAGGGCCTCCTaGACGTCCCTTATGTTCTCT +
Preference number: 4 (lower is better)
Translates to: GCRRASRSPLEFLPQQGIRPRAS*TSLMFS
Trigger: AGAGAACATAAGGGACGTCCAGGAGGCCCTTGGTCT...AATCCCCTGCTGTGGTAGGAACTCCAGTGGTGAACGGCTTGCGCGCCTGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp AGAGCAAGTCAGGTAAGCTCTGTGTGCGCGCACACGCACGAGTGTGAAAGATTGGGCACAAGCTGGAGGTaGGTAGGGGGACGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: RASQVSSVCAHTHECERLGTSWR*VGGRLG
Trigger: CCCCAACCGTCCCCCTACCCACCTCCAGCTTGTGCC...CAATCTTTCACACTCGTGCGTGTGCGCGCACACAGAGCTTACCTGACTTGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR TCA 90 bp CTGCATGACTCAAGCAGAGCAAGTCAGGTAAGCTCTGTGTGCGCGCACACGCACGGGAGCACTGCGCCATaGTTCCTTGGAGCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: LHDSSRASQVSSVCAHTHGSTAP*FLGAEN
Trigger: GTTCTCTGCTCCAAGGAATCATGGCGCAGTGCTCCC...GTGCGTGTGCGCGCACACAGAGCTTACCTGACTTGCTCTGCTTGAGTCATGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp AGTAATCGTCAGGGTGCGAAATTCCTTGGTGGCCAGATGCCCATGGCAAGCAGACTTTCCCTGCAACTCTaGCTGCAGGCGCGCAAGCCG +
Preference number: 4 (lower is better)
Translates to: SNRQGAKFLGGQMPMASRLSLQL*LQARKP
Trigger: CGGCTTGCGCGCCTGCAGCCAGAGTTGCAGGGAAAG...TCTGCTTGCCATGGGCATCTGGCCACCAAGGAATTTCGCACCCTGACGATTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp GGCTGCAGGCGCGCAAGCCGTTCACCACTGGAGTTCCTACCACAGCAGGGGATTTCCGAGCTTCTCAGCTaGCCTTCTTGGATTCATGCA +
Preference number: 4 (lower is better)
Translates to: GCRRASRSPLEFLPQQGISELLS*PSWIHA
Trigger: TGCATGAATCCAAGAAGGCCAGCTGAGAAGCTCGGA...AATCCCCTGCTGTGGTAGGAACTCCAGTGGTGAACGGCTTGCGCGCCTGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR GCA 90 bp AGTAATCGTCAGGGTGCGAAATTCCTTGGTGGCCAGATGCCCATGGCAAGCAGAAGGAGCCCTTGTCTGTaGTCTCTGACCCCGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SNRQGAKFLGGQMPMASRRSPCL*SLTPSC
Trigger: GCAGCTCGGGGTCAGAGAGCACAGACAAGGGCTCCT...TCTGCTTGCCATGGGCATCTGGCCACCAAGGAATTTCGCACCCTGACGATTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp CTGCATGACTCAAGCAGAGCAAGTCAGGTAAGCTCTGTGTGCGCGCACACGCACACCAGTAGGACAGCTTaGGCAAGTAGGTCCCGGTCT +
Preference number: 4 (lower is better)
Translates to: LHDSSRASQVSSVCAHTHTSRTA*ASRSRS
Trigger: AGACCGGGACCTACTTGCCCAAGCTGTCCTACTGGT...GTGCGTGTGCGCGCACACAGAGCTTACCTGACTTGCTCTGCTTGAGTCATGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR TCA 90 bp AGTAATCGTCAGGGTGCGAAATTCCTTGGTGGCCAGATGCCCATGGCAAGCAGATGGGCCCTTGCTGGCTaGAGTCGTCATTCCACCCTT +
Preference number: 4 (lower is better)
Translates to: SNRQGAKFLGGQMPMASRWALAG*SRHSTL
Trigger: AAGGGTGGAATGACGACTTCAGCCAGCAAGGGCCCA...TCTGCTTGCCATGGGCATCTGGCCACCAAGGAATTTCGCACCCTGACGATTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR GCA 90 bp CTGCATGACTCAAGCAGAGCAAGTCAGGTAAGCTCTGTGTGCGCGCACACGCACCCAAAACCCTTCGTCTaGGGCAGGTTTCGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: LHDSSRASQVSSVCAHTHPKPFV*GRFRLS
Trigger: AGACAAGCGAAACCTGCCGCAGACGAAGGGTTTTGG...GTGCGTGTGCGCGCACACAGAGCTTACCTGACTTGCTCTGCTTGAGTCATGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR GCA 90 bp GCTCTGTGTGCGCGCACACGCACGAGTGTGAAAGATTGCGTGGTATTAAAACAACCCTGCAACTCTGGCTaGAGGCGCGCAAGCCGTTCA +
Preference number: 4 (lower is better)
Translates to: ALCARTRTSVKDCVVLKQPCNSG*RRASRS
Trigger: TGAACGGCTTGCGCGCCTGCAGCCAGAGTTGCAGGG...TTGTTTTAATACCACGCAATCTTTCACACTCGTGCGTGTGCGCGCACACAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR GCA 90 bp AGAGCAAGTCAGGTAAGCTCTGTGTGCGCGCACACGCACGAGTGTGAAAGATTGGTATGCCTCAGCACCTaGAGCAGCAGGCAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: RASQVSSVCAHTHECERLVCLST*SSRQES
Trigger: AGACTCCTGCCTGCTGCTGCAGGTGCTGAGGCATAC...CAATCTTTCACACTCGTGCGTGTGCGCGCACACAGAGCTTACCTGACTTGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp CTGCATGACTCAAGCAGAGCAAGTCAGGTAAGCTCTGTGTGCGCGCACACGCACTGCGAAATTCCTTGGTaGCCAGATGCCCATGGCAAG +
Preference number: 4 (lower is better)
Translates to: LHDSSRASQVSSVCAHTHCEIPW*PDAHGK
Trigger: CTTGCCATGGGCATCTGGCCACCAAGGAATTTCGCA...GTGCGTGTGCGCGCACACAGAGCTTACCTGACTTGCTCTGCTTGAGTCATGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp CTGCATGACTCAAGCAGAGCAAGTCAGGTAAGCTCTGTGTGCGCGCACACGCACGGTCCACACCTGGTATaGGAGACAATTCCCATCCTC +
Preference number: 4 (lower is better)
Translates to: LHDSSRASQVSSVCAHTHGPHLV*ETIPIL
Trigger: GAGGATGGGAATTGTCTCCCATACCAGGTGTGGACC...GTGCGTGTGCGCGCACACAGAGCTTACCTGACTTGCTCTGCTTGAGTCATGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp AGTAATCGTCAGGGTGCGAAATTCCTTGGTGGCCAGATGCCCATGGCAAGCAGAAGCCTGGGCCCTTGCTaGCTGAAGTCGTCATTCCAC +
Preference number: 4 (lower is better)
Translates to: SNRQGAKFLGGQMPMASRSLGPC*LKSSFH
Trigger: GTGGAATGACGACTTCAGCCAGCAAGGGCCCAGGCT...TCTGCTTGCCATGGGCATCTGGCCACCAAGGAATTTCGCACCCTGACGATTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp CTGCATGACTCAAGCAGAGCAAGTCAGGTAAGCTCTGTGTGCGCGCACACGCACGGTTTCCCAGTTATTTaGGGTGGGTTTCGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LHDSSRASQVSSVCAHTHGFPVI*GGFRPG
Trigger: CCCTGGACGAAACCCACCCCAAATAACTGGGAAACC...GTGCGTGTGCGCGCACACAGAGCTTACCTGACTTGCTCTGCTTGAGTCATGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR TCA 90 bp ACCAGAGCCCTCCTGCAGTATCTAGTTGTCTATGTCCATTGTCCTCTCCTGACAAATGGCCCGGTCAGCTaGCTTGCCCAAGGACACCCA +
Preference number: 4 (lower is better)
Translates to: TRALLQYLVVYVHCPLLTNGPVS*LAQGHP
Trigger: TGGGTGTCCTTGGGCAAGTCAGCTGACCGGGCCATT...TGTCAGGAGAGGACAATGGACATAGACAACTAGATACTGCAGGAGGGCTCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR GCA 90 bp AGGCACTATCAGGCAGAACATCACACCTGCATGTCTACCTTCACTCCGCAGGCTTCTCTGACCCCGAGCTaGTCTGGTTCTGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: RHYQAEHHTCMSTFTPQASLTPS*SGSAVL
Trigger: CAGAACAGCAGAACCAGAGCAGCTCGGGGTCAGAGA...AGCCTGCGGAGTGAAGGTAGACATGCAGGTGTGATGTTCTGCCTGATAGTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp AGGCACTATCAGGCAGAACATCACACCTGCATGTCTACCTTCACTCCGCAGGCTTCCTCCTCCAAAGGATaGTACCAGTGCCACCAGCAG +
Preference number: 4 (lower is better)
Translates to: RHYQAEHHTCMSTFTPQASSSKG*YQCHQQ
Trigger: CTGCTGGTGGCACTGGTACCATCCTTTGGAGGAGGA...AGCCTGCGGAGTGAAGGTAGACATGCAGGTGTGATGTTCTGCCTGATAGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp AGGCACTATCAGGCAGAACATCACACCTGCATGTCTACCTTCACTCCGCAGGCTTGTAGGGTAAGACACTaGCAGGCCTTCAGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: RHYQAEHHTCMSTFTPQACRVRH*QAFRSG
Trigger: CCCAGACCTGAAGGCCTGCCAGTGTCTTACCCTACA...AGCCTGCGGAGTGAAGGTAGACATGCAGGTGTGATGTTCTGCCTGATAGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR TCA 90 bp CACACCTGGTATGGGAGACAATTCCCATCCTCCTCCAAAGGATGGTACCAGTGCCGGGGCCTTGAGGTGTaGTTTGTTTCGCTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: HTWYGRQFPSSSKGWYQCRGLEV*FVSLVF
Trigger: AAAGACCAGCGAAACAAATCACACCTCAAGGCCCCG...GCACTGGTACCATCCTTTGGAGGAGGATGGGAATTGTCTCCCATACCAGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR TCA 90 bp AACCAGAGCCCTCCTGCAGTATCTAGTTGTCTATGTCCATTGTCCTCTCCTGACCTGGTTCTGCTGTTCTaGCCCTGCACTGGAGGTCAC +
Preference number: 4 (lower is better)
Translates to: NQSPPAVSSCLCPLSSPDLVLLF*PCTGGH
Trigger: GTGACCTCCAGTGCAGGGTCAGAACAGCAGAACCAG...GTCAGGAGAGGACAATGGACATAGACAACTAGATACTGCAGGAGGGCTCTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR TCA 90 bp GGCTGCAGGCGCGCAAGCCGTTCACCACTGGAGTTCCTACCACAGCAGGGGATTCACAAAACCACCAACTaGCACTTTAGCATGAAGAAA +
Preference number: 4 (lower is better)
Translates to: GCRRASRSPLEFLPQQGIHKTTN*HFSMKK
Trigger: TTTCTTCATGCTAAAGTGTCAGTTGGTGGTTTTGTG...AATCCCCTGCTGTGGTAGGAACTCCAGTGGTGAACGGCTTGCGCGCCTGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR TCA 90 bp AGGCACTATCAGGCAGAACATCACACCTGCATGTCTACCTTCACTCCGCAGGCTCCTTTCCAAGACTTCTaGGGGGCCAAACTTGGGTCA +
Preference number: 4 (lower is better)
Translates to: RHYQAEHHTCMSTFTPQAPFQDF*GAKLGS
Trigger: TGACCCAAGTTTGGCCCCTCAGAAGTCTTGGAAAGG...AGCCTGCGGAGTGAAGGTAGACATGCAGGTGTGATGTTCTGCCTGATAGTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR GCA 90 bp GGCTGCAGGCGCGCAAGCCGTTCACCACTGGAGTTCCTACCACAGCAGGGGATTAAGATAAGCAAAGCTTaGATCCCAGACACAAGCATT +
Preference number: 4 (lower is better)
Translates to: GCRRASRSPLEFLPQQGIKISKA*IPDTSI
Trigger: AATGCTTGTGTCTGGGATGCAAGCTTTGCTTATCTT...AATCCCCTGCTGTGGTAGGAACTCCAGTGGTGAACGGCTTGCGCGCCTGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR GCA 90 bp GGCTGCAGGCGCGCAAGCCGTTCACCACTGGAGTTCCTACCACAGCAGGGGATTAGTGTTTTTACACGCTaGCTACTAATTGTAGGGCAT +
Preference number: 4 (lower is better)
Translates to: GCRRASRSPLEFLPQQGISVFTR*LLIVGH
Trigger: ATGCCCTACAATTAGTAGGCAGCGTGTAAAAACACT...AATCCCCTGCTGTGGTAGGAACTCCAGTGGTGAACGGCTTGCGCGCCTGCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR GCA 90 bp ACCAGAGCCCTCCTGCAGTATCTAGTTGTCTATGTCCATTGTCCTCTCCTGACACACCTCTGGGAGCACTaGGCCATGATTCCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: TRALLQYLVVYVHCPLLTHLWEH*AMIPWS
Trigger: GCTCCAAGGAATCATGGCGCAGTGCTCCCAGAGGTG...TGTCAGGAGAGGACAATGGACATAGACAACTAGATACTGCAGGAGGGCTCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp CACACCTGGTATGGGAGACAATTCCCATCCTCCTCCAAAGGATGGTACCAGTGCAAGGTGGAGTCTGGCTaGTTTCCATTTCCACGCCGT +
Preference number: 4 (lower is better)
Translates to: HTWYGRQFPSSSKGWYQCKVESG*FPFPRR
Trigger: ACGGCGTGGAAATGGAAACCAGCCAGACTCCACCTT...GCACTGGTACCATCCTTTGGAGGAGGATGGGAATTGTCTCCCATACCAGGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp CACACCTGGTATGGGAGACAATTCCCATCCTCCTCCAAAGGATGGTACCAGTGCCCCAGTTATTTGGGGTaGGTTTCGTCCAGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: HTWYGRQFPSSSKGWYQCPSYLG*VSSREG
Trigger: TCCTTCCCTGGACGAAACCCACCCCAAATAACTGGG...GCACTGGTACCATCCTTTGGAGGAGGATGGGAATTGTCTCCCATACCAGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR CAA 72 bp CAGAGCCCTCCTGCAGTATCTAGTTGTCTATGTCCATaGTCCTCTCCTGACAGAAGCCCTAAAGACAGGCCG +
Preference number: 4 (lower is better)
Translates to: QSPPAVSSCLCP*SSPDRSPKDRP
Trigger: CGGCCTGTCTTTAGGGCTTCTGTCAGGAGAGGACAATGGACATAGACAACTAGATACTGCAGGAGGGCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR TCA 90 bp GATTCTCCAGGGATGCAAGCAGCATGGGCAGGTGGAGGTTTTGAATTTCATACCCACGCCGTAGGGCTATaGAATCAGAGAGCACAAGCC +
Preference number: 4 (lower is better)
Translates to: DSPGMQAAWAGGGFEFHTHAVGL*NQRAQA
Trigger: GGCTTGTGCTCTCTGATTTCATAGCCCTACGGCGTG...GGTATGAAATTCAAAACCTCCACCTGCCCATGCTGCTTGCATCCCTGGAGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR GCA 90 bp GCTCTGTGTGCGCGCACACGCACGAGTGTGAAAGATTGCGTGGTATTAAAACAAACAAGCCTGGGCCCTTaGTGGCTGAAGTCGTCATTC +
Preference number: 4 (lower is better)
Translates to: ALCARTRTSVKDCVVLKQTSLGP*WLKSSF
Trigger: GAATGACGACTTCAGCCAGCAAGGGCCCAGGCTTGT...TTGTTTTAATACCACGCAATCTTTCACACTCGTGCGTGTGCGCGCACACAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR GCA 90 bp AGGCACTATCAGGCAGAACATCACACCTGCATGTCTACCTTCACTCCGCAGGCTGCAGAACATCACACCTaGATGTCTACCTTCACTCCG +
Preference number: 4 (lower is better)
Translates to: RHYQAEHHTCMSTFTPQAAEHHT*MSTFTP
Trigger: CGGAGTGAAGGTAGACATGCAGGTGTGATGTTCTGC...AGCCTGCGGAGTGAAGGTAGACATGCAGGTGTGATGTTCTGCCTGATAGTGCCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp CTGCATGACTCAAGCAGAGCAAGTCAGGTAAGCTCTGTGTGCGCGCACACGCACCGTCTGTATCCAAAATaGCCTGTGGGAAACATGAGA +
Preference number: 4 (lower is better)
Translates to: LHDSSRASQVSSVCAHTHRLYPK*PVGNMR
Trigger: TCTCATGTTTCCCACAGGCCATTTTGGATACAGACG...GTGCGTGTGCGCGCACACAGAGCTTACCTGACTTGCTCTGCTTGAGTCATGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp CTGCATGACTCAAGCAGAGCAAGTCAGGTAAGCTCTGTGTGCGCGCACACGCACTTCCGTCCACACAACTaGAAAGAAACGACTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LHDSSRASQVSSVCAHTHFRPHN*KETTLP
Trigger: AGGAAGAGTCGTTTCTTTCCAGTTGTGTGGACGGAA...GTGCGTGTGCGCGCACACAGAGCTTACCTGACTTGCTCTGCTTGAGTCATGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp AACCAGAGCCCTCCTGCAGTATCTAGTTGTCTATGTCCATTGTCCTCTCCTGACGCAGGCCTTCAGGTCTaGGGTTCAGGGCTGCATTTA +
Preference number: 4 (lower is better)
Translates to: NQSPPAVSSCLCPLSSPDAGLQV*GSGLHL
Trigger: TAAATGCAGCCCTGAACCCCAGACCTGAAGGCCTGC...GTCAGGAGAGGACAATGGACATAGACAACTAGATACTGCAGGAGGGCTCTGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR TCA 90 bp GATTCTCCAGGGATGCAAGCAGCATGGGCAGGTGGAGGTTTTGAATTTCATACCCCACCAGCTGAGAATTaGTCCGAGGTTTTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: DSPGMQAAWAGGGFEFHTPPAEN*SEVFWW
Trigger: CCACCAGAAAACCTCGGATCAATTCTCAGCTGGTGG...GGTATGAAATTCAAAACCTCCACCTGCCCATGCTGCTTGCATCCCTGGAGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR TCA 90 bp AGAGCAAGTCAGGTAAGCTCTGTGTGCGCGCACACGCACGAGTGTGAAAGATTGTGTTGTGCCACCAGCTaGGAATTGATCCGAGGTTTT +
Preference number: 4 (lower is better)
Translates to: RASQVSSVCAHTHECERLCCATS*ELIRGF
Trigger: AAAACCTCGGATCAATTCTCAGCTGGTGGCACAACA...CAATCTTTCACACTCGTGCGTGTGCGCGCACACAGAGCTTACCTGACTTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR TCA 90 bp AGGCACTATCAGGCAGAACATCACACCTGCATGTCTACCTTCACTCCGCAGGCTACCACAGCAGGGGATTaGGAAATGTCTCCAAACACT +
Preference number: 4 (lower is better)
Translates to: RHYQAEHHTCMSTFTPQATTAGD*EMSPNT
Trigger: AGTGTTTGGAGACATTTCTCAATCCCCTGCTGTGGT...AGCCTGCGGAGTGAAGGTAGACATGCAGGTGTGATGTTCTGCCTGATAGTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR TCA 90 bp AGGCACTATCAGGCAGAACATCACACCTGCATGTCTACCTTCACTCCGCAGGCTTTCCTTGCTATGGTTTaGAGGGTTAGGAGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: RHYQAEHHTCMSTFTPQAFLAMV*RVRSGL
Trigger: AAGGCCACTCCTAACCCTTCAAACCATAGCAAGGAA...AGCCTGCGGAGTGAAGGTAGACATGCAGGTGTGATGTTCTGCCTGATAGTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR GCA 90 bp GATTCTCCAGGGATGCAAGCAGCATGGGCAGGTGGAGGTTTTGAATTTCATACCGGTGGCATACTGTTGTaGCACTTGTTGTGCCACCAG +
Preference number: 4 (lower is better)
Translates to: DSPGMQAAWAGGGFEFHTGGILL*HLLCHQ
Trigger: CTGGTGGCACAACAAGTGGCACAACAGTATGCCACC...GGTATGAAATTCAAAACCTCCACCTGCCCATGCTGCTTGCATCCCTGGAGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp AACCAGAGCCCTCCTGCAGTATCTAGTTGTCTATGTCCATTGTCCTCTCCTGACCACTGGAGGTCACTGTaGATGAGGATGTCGATGAGG +
Preference number: 4 (lower is better)
Translates to: NQSPPAVSSCLCPLSSPDHWRSL*MRMSMR
Trigger: CCTCATCGACATCCTCATCCACAGTGACCTCCAGTG...GTCAGGAGAGGACAATGGACATAGACAACTAGATACTGCAGGAGGGCTCTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp CATGTAGAAAGGAGAAACAAGGGACTAGCTTCCTGGATGGACCAAAAATACAGTTGTCGCCCTTTGGCGTaGAGGAACGGGAGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: HVERRNKGLASWMDQKYSCRPLA*RNGRSP
Trigger: AGGGCTCCTCCCGTTCCTCCACGCCAAAGGGCGACA...ACTGTATTTTTGGTCCATCCAGGAAGCTAGTCCCTTGTTTCTCCTTTCTACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp AGGCACTATCAGGCAGAACATCACACCTGCATGTCTACCTTCACTCCGCAGGCTCTCAGCTGGCCTTCTTaGATTCATGCAGTTCCACAA +
Preference number: 4 (lower is better)
Translates to: RHYQAEHHTCMSTFTPQALSWPS*IHAVPQ
Trigger: TTGTGGAACTGCATGAATCCAAGAAGGCCAGCTGAG...AGCCTGCGGAGTGAAGGTAGACATGCAGGTGTGATGTTCTGCCTGATAGTGCCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp GGCTGCAGGCGCGCAAGCCGTTCACCACTGGAGTTCCTACCACAGCAGGGGATTGGAATCATATCCATGTaGTGTTCTACTCTGTTATTT +
Preference number: 4 (lower is better)
Translates to: GCRRASRSPLEFLPQQGIGIISM*CSTLLF
Trigger: AAATAACAGAGTAGAACACCACATGGATATGATTCC...AATCCCCTGCTGTGGTAGGAACTCCAGTGGTGAACGGCTTGCGCGCCTGCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR TCA 90 bp GATTCTCCAGGGATGCAAGCAGCATGGGCAGGTGGAGGTTTTGAATTTCATACCTTCATCATTGACTGCTaGCATGTCGCCCTTTGGCGT +
Preference number: 4 (lower is better)
Translates to: DSPGMQAAWAGGGFEFHTFIIDC*HVALWR
Trigger: ACGCCAAAGGGCGACATGTCAGCAGTCAATGATGAA...GGTATGAAATTCAAAACCTCCACCTGCCCATGCTGCTTGCATCCCTGGAGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR TCA 90 bp AGGCACTATCAGGCAGAACATCACACCTGCATGTCTACCTTCACTCCGCAGGCTTCTCTGAGACATAGTTaGCCTAAATCCAGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: RHYQAEHHTCMSTFTPQASLRHS*PKSSWP
Trigger: TGGCCAACTGGATTTAGGTCAACTATGTCTCAGAGA...AGCCTGCGGAGTGAAGGTAGACATGCAGGTGTGATGTTCTGCCTGATAGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR GCA 90 bp AACCAGAGCCCTCCTGCAGTATCTAGTTGTCTATGTCCATTGTCCTCTCCTGACGTTTTCTGGTGGAGGTaGCTTTCCTCACATCGCAGA +
Preference number: 4 (lower is better)
Translates to: NQSPPAVSSCLCPLSSPDVFWWR*LSSHRR
Trigger: TCTGCGATGTGAGGAAAGGCACCTCCACCAGAAAAC...GTCAGGAGAGGACAATGGACATAGACAACTAGATACTGCAGGAGGGCTCTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp ACCAGAGCCCTCCTGCAGTATCTAGTTGTCTATGTCCATTGTCCTCTCCTGACATCCGAGGTTTTCTGGTaGAGGTGCCTTTCCTCACAT +
Preference number: 4 (lower is better)
Translates to: TRALLQYLVVYVHCPLLTSEVFW*RCLSSH
Trigger: ATGTGAGGAAAGGCACCTCCACCAGAAAACCTCGGA...TGTCAGGAGAGGACAATGGACATAGACAACTAGATACTGCAGGAGGGCTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp GCTCTGTGTGCGCGCACACGCACGAGTGTGAAAGATTGCGTGGTATTAAAACAAACCAAGTGCTTGCTTTaGTCCACACCTGGTATGGGA +
Preference number: 4 (lower is better)
Translates to: ALCARTRTSVKDCVVLKQTKCLL*STPGMG
Trigger: TCCCATACCAGGTGTGGACCAAAGCAAGCACTTGGT...TTGTTTTAATACCACGCAATCTTTCACACTCGTGCGTGTGCGCGCACACAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp AACCAGAGCCCTCCTGCAGTATCTAGTTGTCTATGTCCATTGTCCTCTCCTGACCTGATTAGTGATGTCTaGCACAAGCTGGAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: NQSPPAVSSCLCPLSSPDLISDV*HKLEVG
Trigger: ACCCACCTCCAGCTTGTGCCAGACATCACTAATCAG...GTCAGGAGAGGACAATGGACATAGACAACTAGATACTGCAGGAGGGCTCTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR CAA 72 bp ATGTGGTGTTCTACTCTGTTATTTGAGAGCCCCCGGTaGACAGAACCAGTAGGACAGCTTGGGCAAGTAGGT +
Preference number: 4 (lower is better)
Translates to: MWCSTLLFESPR*TEPVGQLGQVG
Trigger: ACCTACTTGCCCAAGCTGTCCTACTGGTTCTGTCAACCGGGGGCTCTCAAATAACAGAGTAGAACACCACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR TCA 90 bp AGAAACGTCAAGCAGGTGTCAAAAATCCCACTGGACTTTATTTACATGCAGGCTCTTGTCTGTGCTCTCTaGCCCCGAGCTGCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: RNVKQVSKIPLDFIYMQALVCAL*PRAALV
Trigger: AACCAGAGCAGCTCGGGGTCAGAGAGCACAGACAAG...AGCCTGCATGTAAATAAAGTCCAGTGGGATTTTTGACACCTGCTTGACGTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR TCA 90 bp AGTAATCGTCAGGGTGCGAAATTCCTTGGTGGCCAGATGCCCATGGCAAGCAGAAAGAATGCTCACAACTaGATCGGTAGAGTGAAGGTT +
Preference number: 4 (lower is better)
Translates to: SNRQGAKFLGGQMPMASRKNAHN*IGRVKV
Trigger: AACCTTCACTCTACCGATTCAGTTGTGAGCATTCTT...TCTGCTTGCCATGGGCATCTGGCCACCAAGGAATTTCGCACCCTGACGATTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR TCA 90 bp AGAAACGTCAAGCAGGTGTCAAAAATCCCACTGGACTTTATTTACATGCAGGCTGGCCTGTGGGAAACATaGGAGACCCCATCCAATCCC +
Preference number: 4 (lower is better)
Translates to: RNVKQVSKIPLDFIYMQAGLWET*ETPSNP
Trigger: GGGATTGGATGGGGTCTCTCATGTTTCCCACAGGCC...AGCCTGCATGTAAATAAAGTCCAGTGGGATTTTTGACACCTGCTTGACGTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR TCA 90 bp CATGTAGAAAGGAGAAACAAGGGACTAGCTTCCTGGATGGACCAAAAATACAGTTGGGGGCCCTCACAGTaGACTCCTCAGGCACAAAAG +
Preference number: 4 (lower is better)
Translates to: HVERRNKGLASWMDQKYSWGPSQ*TPQAQK
Trigger: CTTTTGTGCCTGAGGAGTTCACTGTGAGGGCCCCCA...ACTGTATTTTTGGTCCATCCAGGAAGCTAGTCCCTTGTTTCTCCTTTCTACATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR TCA 90 bp AACCAGAGCCCTCCTGCAGTATCTAGTTGTCTATGTCCATTGTCCTCTCCTGACAAGAATCCCCTGGTCTaGCCCTGTTTTGAACAGGAA +
Preference number: 4 (lower is better)
Translates to: NQSPPAVSSCLCPLSSPDKNPLV*PCFEQE
Trigger: TTCCTGTTCAAAACAGGGTCAGACCAGGGGATTCTT...GTCAGGAGAGGACAATGGACATAGACAACTAGATACTGCAGGAGGGCTCTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR GCA 90 bp AGTAATCGTCAGGGTGCGAAATTCCTTGGTGGCCAGATGCCCATGGCAAGCAGAATCAAGCACCAGCGTTaGCATGGATTGGTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: SNRQGAKFLGGQMPMASRIKHQR*HGLVSN
Trigger: ATTTGAAACCAATCCATGGCAACGCTGGTGCTTGAT...TCTGCTTGCCATGGGCATCTGGCCACCAAGGAATTTCGCACCCTGACGATTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR GCA 90 bp CTGCATGACTCAAGCAGAGCAAGTCAGGTAAGCTCTGTGTGCGCGCACACGCACACGAAGAATGGAACTTaGTGTTTTATCAGAACAGAC +
Preference number: 4 (lower is better)
Translates to: LHDSSRASQVSSVCAHTHTKNGT*CFIRTD
Trigger: GTCTGTTCTGATAAAACAGCAAGTTCCATTCTTCGT...GTGCGTGTGCGCGCACACAGAGCTTACCTGACTTGCTCTGCTTGAGTCATGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR GCA 90 bp ACCAGAGCCCTCCTGCAGTATCTAGTTGTCTATGTCCATTGTCCTCTCCTGACAAACGACTCTTCCTTGTaGCTCCCCTGTAAAGACCAA +
Preference number: 4 (lower is better)
Translates to: TRALLQYLVVYVHCPLLTNDSSL*LPCKDQ
Trigger: TTGGTCTTTACAGGGGAGGCACAAGGAAGAGTCGTT...TGTCAGGAGAGGACAATGGACATAGACAACTAGATACTGCAGGAGGGCTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR GCA 90 bp AGTAATCGTCAGGGTGCGAAATTCCTTGGTGGCCAGATGCCCATGGCAAGCAGATGTTATAACCAGCACTaGACTGATGCACAATTGGGA +
Preference number: 4 (lower is better)
Translates to: SNRQGAKFLGGQMPMASRCYNQH*TDAQLG
Trigger: TCCCAATTGTGCATCAGTGCAGTGCTGGTTATAACA...TCTGCTTGCCATGGGCATCTGGCCACCAAGGAATTTCGCACCCTGACGATTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR GCA 90 bp GCTCTGTGTGCGCGCACACGCACGAGTGTGAAAGATTGCGTGGTATTAAAACAAGAATGGCAAATGGGTTaGACTTCAGGAAGACGTGCT +
Preference number: 4 (lower is better)
Translates to: ALCARTRTSVKDCVVLKQEWQMG*TSGRRA
Trigger: AGCACGTCTTCCTGAAGTGCAACCCATTTGCCATTC...TTGTTTTAATACCACGCAATCTTTCACACTCGTGCGTGTGCGCGCACACAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR GCA 90 bp AGAAAGGAGAAACAAGGGACTAGCTTCCTGGATGGACCAAAAATACAGTTTATACCCGGTCAGCTGACTTaGCCAAGGACACCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: RKEKQGTSFLDGPKIQFIPGQLT*PRTPRQ
Trigger: CTGCCTGGGTGTCCTTGGGCAAGTCAGCTGACCGGG...TATAAACTGTATTTTTGGTCCATCCAGGAAGCTAGTCCCTTGTTTCTCCTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp AGGCACTATCAGGCAGAACATCACACCTGCATGTCTACCTTCACTCCGCAGGCTCAGCCTATGAGTAGCTaGTTAATCAGCTTTTTCCAC +
Preference number: 4 (lower is better)
Translates to: RHYQAEHHTCMSTFTPQAQPMSS*LISFFH
Trigger: GTGGAAAAAGCTGATTAACCAGCTACTCATAGGCTG...AGCCTGCGGAGTGAAGGTAGACATGCAGGTGTGATGTTCTGCCTGATAGTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp AACCAGAGCCCTCCTGCAGTATCTAGTTGTCTATGTCCATTGTCCTCTCCTGACCTGAGGGGCCAAACTTaGGTCACGTTCAGTACTAAA +
Preference number: 4 (lower is better)
Translates to: NQSPPAVSSCLCPLSSPDLRGQT*VTFSTK
Trigger: TTTAGTACTGAACGTGACCCAAGTTTGGCCCCTCAG...GTCAGGAGAGGACAATGGACATAGACAACTAGATACTGCAGGAGGGCTCTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp CACACCTGGTATGGGAGACAATTCCCATCCTCCTCCAAAGGATGGTACCAGTGCTTCTCAATGGGGATCTaGACACTTGGTGTTAACACT +
Preference number: 4 (lower is better)
Translates to: HTWYGRQFPSSSKGWYQCFSMGI*TLGVNT
Trigger: AGTGTTAACACCAAGTGTCCAGATCCCCATTGAGAA...GCACTGGTACCATCCTTTGGAGGAGGATGGGAATTGTCTCCCATACCAGGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp GATTCTCCAGGGATGCAAGCAGCATGGGCAGGTGGAGGTTTTGAATTTCATACCCATGGGATTTCTCAATaGGGATCTGGACACTTGGTG +
Preference number: 4 (lower is better)
Translates to: DSPGMQAAWAGGGFEFHTHGISQ*GSGHLV
Trigger: CACCAAGTGTCCAGATCCCCATTGAGAAATCCCATG...GGTATGAAATTCAAAACCTCCACCTGCCCATGCTGCTTGCATCCCTGGAGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp AACCAGAGCCCTCCTGCAGTATCTAGTTGTCTATGTCCATTGTCCTCTCCTGACGGAAGGAATGGCAAATaGGTTGCACTTCAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: NQSPPAVSSCLCPLSSPDGRNGK*VALQED
Trigger: GTCTTCCTGAAGTGCAACCCATTTGCCATTCCTTCC...GTCAGGAGAGGACAATGGACATAGACAACTAGATACTGCAGGAGGGCTCTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR CAA 72 bp TTTCCGTCCACACAACTGGAAAGAAACGACTCTTCCTaGTGCCTCCCCTGTAAAGACCAAGTGCTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: FPSTQLERNDSS*CLPCKDQVLAL
Trigger: CAAAGCAAGCACTTGGTCTTTACAGGGGAGGCACAAGGAAGAGTCGTTTCTTTCCAGTTGTGTGGACGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR TCA 90 bp AACCAGAGCCCTCCTGCAGTATCTAGTTGTCTATGTCCATTGTCCTCTCCTGACAGAAAGATTCATCATTaGCTGCTGACATGTCGCCCT +
Preference number: 4 (lower is better)
Translates to: NQSPPAVSSCLCPLSSPDRKIHH*LLTCRP
Trigger: AGGGCGACATGTCAGCAGTCAATGATGAATCTTTCT...GTCAGGAGAGGACAATGGACATAGACAACTAGATACTGCAGGAGGGCTCTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR TCA 90 bp AGTAATCGTCAGGGTGCGAAATTCCTTGGTGGCCAGATGCCCATGGCAAGCAGATACTTTAGTTACTTTTaGATGATCAAAGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: SNRQGAKFLGGQMPMASRYFSYF*MIKALP
Trigger: GGGCAGGGCTTTGATCATTCAAAAGTAACTAAAGTA...TCTGCTTGCCATGGGCATCTGGCCACCAAGGAATTTCGCACCCTGACGATTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR TCA 90 bp GCTCTGTGTGCGCGCACACGCACGAGTGTGAAAGATTGCGTGGTATTAAAACAATCCAGAATACATGCCTaGGGGATGTCATCAATTTCC +
Preference number: 4 (lower is better)
Translates to: ALCARTRTSVKDCVVLKQSRIHA*GMSSIS
Trigger: GGAAATTGATGACATCCCTCAGGCATGTATTCTGGA...TTGTTTTAATACCACGCAATCTTTCACACTCGTGCGTGTGCGCGCACACAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR GCA 90 bp ACCAGAGCCCTCCTGCAGTATCTAGTTGTCTATGTCCATTGTCCTCTCCTGACAACTCCCACTGTTAGCTaGGGTTTCTACAAAGATGGT +
Preference number: 4 (lower is better)
Translates to: TRALLQYLVVYVHCPLLTTPTVS*GFYKDG
Trigger: ACCATCTTTGTAGAAACCGCAGCTAACAGTGGGAGT...TGTCAGGAGAGGACAATGGACATAGACAACTAGATACTGCAGGAGGGCTCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR GCA 90 bp CACACCTGGTATGGGAGACAATTCCCATCCTCCTCCAAAGGATGGTACCAGTGCCATTTCCAGAATACATaGCTGAGGGATGTCATCAAT +
Preference number: 4 (lower is better)
Translates to: HTWYGRQFPSSSKGWYQCHFQNT*LRDVIN
Trigger: ATTGATGACATCCCTCAGGCATGTATTCTGGAAATG...GCACTGGTACCATCCTTTGGAGGAGGATGGGAATTGTCTCCCATACCAGGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR GCA 90 bp AGGCACTATCAGGCAGAACATCACACCTGCATGTCTACCTTCACTCCGCAGGCTTTCAACTCAACATCCTaGGCTATTTACACTCTCTTC +
Preference number: 4 (lower is better)
Translates to: RHYQAEHHTCMSTFTPQAFNSTS*AIYTLF
Trigger: GAAGAGAGTGTAAATAGCGCAGGATGTTGAGTTGAA...AGCCTGCGGAGTGAAGGTAGACATGCAGGTGTGATGTTCTGCCTGATAGTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR TCA 90 bp GCTCTGTGTGCGCGCACACGCACGAGTGTGAAAGATTGCGTGGTATTAAAACAAAGTACACAGTGTGTCTaGACAAAGTGCATACCAACA +
Preference number: 4 (lower is better)
Translates to: ALCARTRTSVKDCVVLKQSTQCV*TKCIPT
Trigger: TGTTGGTATGCACTTTGTTCAGACACACTGTGTACT...TTGTTTTAATACCACGCAATCTTTCACACTCGTGCGTGTGCGCGCACACAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR TCA 90 bp AGAAACGTCAAGCAGGTGTCAAAAATCCCACTGGACTTTATTTACATGCAGGCTCAAGAGCTGCTTCCATaGTCCTGTCACACTCTAGCC +
Preference number: 4 (lower is better)
Translates to: RNVKQVSKIPLDFIYMQAQELLP*SCHTLA
Trigger: GGCTAGAGTGTGACAGGATCATGGAAGCAGCTCTTG...AGCCTGCATGTAAATAAAGTCCAGTGGGATTTTTGACACCTGCTTGACGTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR TCA 90 bp AGTAATCGTCAGGGTGCGAAATTCCTTGGTGGCCAGATGCCCATGGCAAGCAGACCACAATTGAAGTGTTaGTTAAAAACTGCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: SNRQGAKFLGGQMPMASRPQLKC*LKTALK
Trigger: CTTCAAGGCAGTTTTTAATCAACACTTCAATTGTGG...TCTGCTTGCCATGGGCATCTGGCCACCAAGGAATTTCGCACCCTGACGATTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR GCA 90 bp AGAAACGTCAAGCAGGTGTCAAAAATCCCACTGGACTTTATTTACATGCAGGCTTACTGCCAACTGCTGTaGAGTGCTCCTGTCCACGTT +
Preference number: 4 (lower is better)
Translates to: RNVKQVSKIPLDFIYMQAYCQLL*SAPVHV
Trigger: AACGTGGACAGGAGCACTGCACAGCAGTTGGCAGTA...AGCCTGCATGTAAATAAAGTCCAGTGGGATTTTTGACACCTGCTTGACGTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR GCA 90 bp CATGTAGAAAGGAGAAACAAGGGACTAGCTTCCTGGATGGACCAAAAATACAGTACAGTTACTGCCAACTaGTGTGCAGTGCTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: HVERRNKGLASWMDQKYSTVTAN*CAVLLS
Trigger: GGACAGGAGCACTGCACAGCAGTTGGCAGTAACTGT...ACTGTATTTTTGGTCCATCCAGGAAGCTAGTCCCTTGTTTCTCCTTTCTACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR GCA 90 bp CATGTAGAAAGGAGAAACAAGGGACTAGCTTCCTGGATGGACCAAAAATACAGTGTTGCCCACAGTTACTaGCAACTGCTGTGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: HVERRNKGLASWMDQKYSVAHSY*QLLCSA
Trigger: AGCACTGCACAGCAGTTGGCAGTAACTGTGGGCAAC...ACTGTATTTTTGGTCCATCCAGGAAGCTAGTCCCTTGTTTCTCCTTTCTACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR GCA 90 bp GCTCTGTGTGCGCGCACACGCACGAGTGTGAAAGATTGCGTGGTATTAAAACAAAATTGTAGGGCATACTaGAGACACAGGAAGTTACAG +
Preference number: 4 (lower is better)
Translates to: ALCARTRTSVKDCVVLKQNCRAY*RHRKLQ
Trigger: CTGTAACTTCCTGTGTCTGCAGTATGCCCTACAATT...TTGTTTTAATACCACGCAATCTTTCACACTCGTGCGTGTGCGCGCACACAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR GCA 90 bp AGAGCAAGTCAGGTAAGCTCTGTGTGCGCGCACACGCACGAGTGTGAAAGATTGAAACAAATGGAAACTTaGAAGCGTAACACTGTGCTT +
Preference number: 4 (lower is better)
Translates to: RASQVSSVCAHTHECERLKQMET*KRNTVL
Trigger: AAGCACAGTGTTACGCTTGCAAGTTTCCATTTGTTT...CAATCTTTCACACTCGTGCGTGTGCGCGCACACAGAGCTTACCTGACTTGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp AGAAAGGAGAAACAAGGGACTAGCTTCCTGGATGGACCAAAAATACAGTTTATAGACCCCGAGCTGCTCTaGTTCTGCTGTTCTGACCCT +
Preference number: 4 (lower is better)
Translates to: RKEKQGTSFLDGPKIQFIDPELL*FCCSDP
Trigger: AGGGTCAGAACAGCAGAACCAGAGCAGCTCGGGGTC...TATAAACTGTATTTTTGGTCCATCCAGGAAGCTAGTCCCTTGTTTCTCCTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp GATTCTCCAGGGATGCAAGCAGCATGGGCAGGTGGAGGTTTTGAATTTCATACCAAGGGACTAGCTTCCTaGATGGACCAAAAATACAGT +
Preference number: 4 (lower is better)
Translates to: DSPGMQAAWAGGGFEFHTKGLAS*MDQKYS
Trigger: ACTGTATTTTTGGTCCATCCAGGAAGCTAGTCCCTT...GGTATGAAATTCAAAACCTCCACCTGCCCATGCTGCTTGCATCCCTGGAGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp AACCAGAGCCCTCCTGCAGTATCTAGTTGTCTATGTCCATTGTCCTCTCCTGACTCAGGACTGGATGTGTaGTTGATAACCTTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: NQSPPAVSSCLCPLSSPDSGLDV*LITFVQ
Trigger: CTGAACAAAGGTTATCAACCACACATCCAGTCCTGA...GTCAGGAGAGGACAATGGACATAGACAACTAGATACTGCAGGAGGGCTCTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp AACCAGAGCCCTCCTGCAGTATCTAGTTGTCTATGTCCATTGTCCTCTCCTGACAGGAACCTTTCCTGTTaGCTACTCAATTCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: NQSPPAVSSCLCPLSSPDRNLSC*LLNSSC
Trigger: ACAGCTTGAATTGAGTAGCCAACAGGAAAGGTTCCT...GTCAGGAGAGGACAATGGACATAGACAACTAGATACTGCAGGAGGGCTCTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp CACACCTGGTATGGGAGACAATTCCCATCCTCCTCCAAAGGATGGTACCAGTGCCATACCAACAGTTATTaGTTCAATAAGCAGTGCAAC +
Preference number: 4 (lower is better)
Translates to: HTWYGRQFPSSSKGWYQCHTNSY*FNKQCN
Trigger: GTTGCACTGCTTATTGAACCAATAACTGTTGGTATG...GCACTGGTACCATCCTTTGGAGGAGGATGGGAATTGTCTCCCATACCAGGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR CAA 72 bp AAAGTGTCAAGAGTAATCGTCAGGGTGCGAAATTCCTaGGTGGCCAGATGCCCATGGCAAGCAGAAATTATC +
Preference number: 4 (lower is better)
Translates to: KVSRVIVRVRNS*VARCPWQAEII
Trigger: GATAATTTCTGCTTGCCATGGGCATCTGGCCACCAAGGAATTTCGCACCCTGACGATTACTCTTGACACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR TCA 90 bp ACCAGAGCCCTCCTGCAGTATCTAGTTGTCTATGTCCATTGTCCTCTCCTGACATTAGTTACTTTTGAATaGTCAAAGCCCTGCCCAACT +
Preference number: 4 (lower is better)
Translates to: TRALLQYLVVYVHCPLLTLVTFE*SKPCPT
Trigger: AGTTGGGCAGGGCTTTGATCATTCAAAAGTAACTAA...TGTCAGGAGAGGACAATGGACATAGACAACTAGATACTGCAGGAGGGCTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR TCA 90 bp AGAAAGGAGAAACAAGGGACTAGCTTCCTGGATGGACCAAAAATACAGTTTATACAGGCTGCCCTCCCGTaGGTCCCTAAAGGTCAAATA +
Preference number: 4 (lower is better)
Translates to: RKEKQGTSFLDGPKIQFIQAALP*VPKGQI
Trigger: TATTTGACCTTTAGGGACTCACGGGAGGGCAGCCTG...TATAAACTGTATTTTTGGTCCATCCAGGAAGCTAGTCCCTTGTTTCTCCTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR TCA 90 bp GCTCTGTGTGCGCGCACACGCACGAGTGTGAAAGATTGCGTGGTATTAAAACAAACACTAGAGTTTGGCTaGGGATTAGAGAAAACCTTT +
Preference number: 4 (lower is better)
Translates to: ALCARTRTSVKDCVVLKQTLEFG*GLEKTF
Trigger: AAAGGTTTTCTCTAATCCTCAGCCAAACTCTAGTGT...TTGTTTTAATACCACGCAATCTTTCACACTCGTGCGTGTGCGCGCACACAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR TCA 90 bp AACCAGAGCCCTCCTGCAGTATCTAGTTGTCTATGTCCATTGTCCTCTCCTGACTTGATCAAGAATAATTaGGCAAGAGCTGCTTCCATG +
Preference number: 4 (lower is better)
Translates to: NQSPPAVSSCLCPLSSPDLIKNN*ARAASM
Trigger: CATGGAAGCAGCTCTTGCTCAATTATTCTTGATCAA...GTCAGGAGAGGACAATGGACATAGACAACTAGATACTGCAGGAGGGCTCTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR TCA 90 bp GCTCTGTGTGCGCGCACACGCACGAGTGTGAAAGATTGCGTGGTATTAAAACAATCGTCATTCCACCCTTaGTCAAGAATAATTGAGCAA +
Preference number: 4 (lower is better)
Translates to: ALCARTRTSVKDCVVLKQSSFHP*SRIIEQ
Trigger: TTGCTCAATTATTCTTGATCAAGGGTGGAATGACGA...TTGTTTTAATACCACGCAATCTTTCACACTCGTGCGTGTGCGCGCACACAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR GCA 90 bp GATTCTCCAGGGATGCAAGCAGCATGGGCAGGTGGAGGTTTTGAATTTCATACCAGACTGTATGCTGTTTaGTTCACTAGGAGGATCTTT +
Preference number: 4 (lower is better)
Translates to: DSPGMQAAWAGGGFEFHTRLYAV*FTRRIF
Trigger: AAAGATCCTCCTAGTGAAGCAAACAGCATACAGTCT...GGTATGAAATTCAAAACCTCCACCTGCCCATGCTGCTTGCATCCCTGGAGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR GCA 90 bp GCTCTGTGTGCGCGCACACGCACGAGTGTGAAAGATTGCGTGGTATTAAAACAACTTTGTTGTAGCATTTaGAGACTGTATGCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: ALCARTRTSVKDCVVLKQLCCSI*RLYAVC
Trigger: GCAAACAGCATACAGTCTGCAAATGCTACAACAAAG...TTGTTTTAATACCACGCAATCTTTCACACTCGTGCGTGTGCGCGCACACAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR GCA 90 bp ACCAGAGCCCTCCTGCAGTATCTAGTTGTCTATGTCCATTGTCCTCTCCTGACACCTGTAACATCTGATTaGTTAGATAACTCCCACTGT +
Preference number: 4 (lower is better)
Translates to: TRALLQYLVVYVHCPLLTPVTSD*LDNSHC
Trigger: ACAGTGGGAGTTATCTAAGCAATCAGATGTTACAGG...TGTCAGGAGAGGACAATGGACATAGACAACTAGATACTGCAGGAGGGCTCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR GCA 90 bp ACCAGAGCCCTCCTGCAGTATCTAGTTGTCTATGTCCATTGTCCTCTCCTGACAGTGTTGATTAAAAACTaGCTTGAAGGGTTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: TRALLQYLVVYVHCPLLTVLIKN*LEGFPS
Trigger: ACTGGGAAACCCTTCAAGGCAGTTTTTAATCAACAC...TGTCAGGAGAGGACAATGGACATAGACAACTAGATACTGCAGGAGGGCTCTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR GCA 90 bp ACCAGAGCCCTCCTGCAGTATCTAGTTGTCTATGTCCATTGTCCTCTCCTGACACATTTAAAGTTACAGTaGTCATCACTGGCCTCACTA +
Preference number: 4 (lower is better)
Translates to: TRALLQYLVVYVHCPLLTHLKLQ*SSLASL
Trigger: TAGTGAGGCCAGTGATGAGCACTGTAACTTTAAATG...TGTCAGGAGAGGACAATGGACATAGACAACTAGATACTGCAGGAGGGCTCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp CATGTAGAAAGGAGAAACAAGGGACTAGCTTCCTGGATGGACCAAAAATACAGTGTGGCCAGATGCCCATaGCAAGCAGAAATTATCCTG +
Preference number: 4 (lower is better)
Translates to: HVERRNKGLASWMDQKYSVARCP*QAEIIL
Trigger: CAGGATAATTTCTGCTTGCCATGGGCATCTGGCCAC...ACTGTATTTTTGGTCCATCCAGGAAGCTAGTCCCTTGTTTCTCCTTTCTACATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR CAA 72 bp CTTCCCTGTTATAACCAGCACTGCACTGATGCACAATaGGGACTGTATAAATGCTTAGGGACTCGATGCCTT +
Preference number: 4 (lower is better)
Translates to: LPCYNQHCTDAQ*GLYKCLGTRCL
Trigger: AAGGCATCGAGTCCCTAAGCATTTATACAGTCCCAATTGTGCATCAGTGCAGTGCTGGTTATAACAGGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR TCA 90 bp GATTCTCCAGGGATGCAAGCAGCATGGGCAGGTGGAGGTTTTGAATTTCATACCCTTAAAAGGATATGCTaGAAGGATGGAGTTTGTGAA +
Preference number: 4 (lower is better)
Translates to: DSPGMQAAWAGGGFEFHTLKRIC*KDGVCE
Trigger: TTCACAAACTCCATCCTTTCAGCATATCCTTTTAAG...GGTATGAAATTCAAAACCTCCACCTGCCCATGCTGCTTGCATCCCTGGAGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp CATGTAGAAAGGAGAAACAAGGGACTAGCTTCCTGGATGGACCAAAAATACAGTTGGAAGGTTATAGACTaGTATGCCTCAGCACCTGCA +
Preference number: 4 (lower is better)
Translates to: HVERRNKGLASWMDQKYSWKVID*YASAPA
Trigger: TGCAGGTGCTGAGGCATACCAGTCTATAACCTTCCA...ACTGTATTTTTGGTCCATCCAGGAAGCTAGTCCCTTGTTTCTCCTTTCTACATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp AACCAGAGCCCTCCTGCAGTATCTAGTTGTCTATGTCCATTGTCCTCTCCTGACAATGAGGACGAAGAATaGAACTTGCTGTTTTATCAG +
Preference number: 4 (lower is better)
Translates to: NQSPPAVSSCLCPLSSPDNEDEE*NLLFYQ
Trigger: CTGATAAAACAGCAAGTTCCATTCTTCGTCCTCATT...GTCAGGAGAGGACAATGGACATAGACAACTAGATACTGCAGGAGGGCTCTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp ACCAGAGCCCTCCTGCAGTATCTAGTTGTCTATGTCCATTGTCCTCTCCTGACAGTTAACACTAGAGTTTaGCTGAGGATTAGAGAAAAC +
Preference number: 4 (lower is better)
Translates to: TRALLQYLVVYVHCPLLTVNTRV*LRIREN
Trigger: GTTTTCTCTAATCCTCAGCCAAACTCTAGTGTTAAC...TGTCAGGAGAGGACAATGGACATAGACAACTAGATACTGCAGGAGGGCTCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR CAA 72 bp TTGATTAAAAACTGCCTTGAAGGGTTTCCCAGTTATTaGGGGTGGGTTTCGTCCAGGGAAGGAATGGCAAAT +
Preference number: 4 (lower is better)
Translates to: LIKNCLEGFPSY*GWVSSREGMAN
Trigger: ATTTGCCATTCCTTCCCTGGACGAAACCCACCCCAAATAACTGGGAAACCCTTCAAGGCAGTTTTTAATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR TCA 90 bp AGAAAGGAGAAACAAGGGACTAGCTTCCTGGATGGACCAAAAATACAGTTTATAGCATGGGGCAATAAGTaGGCTTGTGTGGCTTTTAGG +
Preference number: 4 (lower is better)
Translates to: RKEKQGTSFLDGPKIQFIAWGNK*ACVAFR
Trigger: CCTAAAAGCCACACAAGCTCACTTATTGCCCCATGC...TATAAACTGTATTTTTGGTCCATCCAGGAAGCTAGTCCCTTGTTTCTCCTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR GCA 90 bp CATGTAGAAAGGAGAAACAAGGGACTAGCTTCCTGGATGGACCAAAAATACAGTTTGTGCCACTTGTTGTaGCACCAGCTGAGAATTGAT +
Preference number: 4 (lower is better)
Translates to: HVERRNKGLASWMDQKYSLCHLL*HQLRID
Trigger: ATCAATTCTCAGCTGGTGGCACAACAAGTGGCACAA...ACTGTATTTTTGGTCCATCCAGGAAGCTAGTCCCTTGTTTCTCCTTTCTACATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR GCA 90 bp GCTCTGTGTGCGCGCACACGCACGAGTGTGAAAGATTGCGTGGTATTAAAACAAACGAGTGTGAAAGATTaGGTGGTATTAAAACAAATG +
Preference number: 4 (lower is better)
Translates to: ALCARTRTSVKDCVVLKQTSVKD*VVLKQM
Trigger: CATTTGTTTTAATACCACGCAATCTTTCACACTCGT...TTGTTTTAATACCACGCAATCTTTCACACTCGTGCGTGTGCGCGCACACAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp CATGTAGAAAGGAGAAACAAGGGACTAGCTTCCTGGATGGACCAAAAATACAGTTCACTAAGAATCCCCTaGTCTGACCCTGTTTTGAAC +
Preference number: 4 (lower is better)
Translates to: HVERRNKGLASWMDQKYSSLRIP*SDPVLN
Trigger: GTTCAAAACAGGGTCAGACCAGGGGATTCTTAGTGA...ACTGTATTTTTGGTCCATCCAGGAAGCTAGTCCCTTGTTTCTCCTTTCTACATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR TCA 90 bp AGAAACGTCAAGCAGGTGTCAAAAATCCCACTGGACTTTATTTACATGCAGGCTACTGAATCGGTAGAGTaGAGGTTTATCAGACAAAGG +
Preference number: 4 (lower is better)
Translates to: RNVKQVSKIPLDFIYMQATESVE*RFIRQR
Trigger: CCTTTGTCTGATAAACCTTCACTCTACCGATTCAGT...AGCCTGCATGTAAATAAAGTCCAGTGGGATTTTTGACACCTGCTTGACGTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR TCA 90 bp CATGTAGAAAGGAGAAACAAGGGACTAGCTTCCTGGATGGACCAAAAATACAGTTGCTTTCTGTGCCACTaGATACCAAGTATTTCTGGT +
Preference number: 4 (lower is better)
Translates to: HVERRNKGLASWMDQKYSCFLCH*IPSISG
Trigger: ACCAGAAATACTTGGTATTCAGTGGCACAGAAAGCA...ACTGTATTTTTGGTCCATCCAGGAAGCTAGTCCCTTGTTTCTCCTTTCTACATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR TCA 90 bp AGAAAGGAGAAACAAGGGACTAGCTTCCTGGATGGACCAAAAATACAGTTTATATGGAAAGAAGCGCTGTaGCTGATTAGTGATGTCTGG +
Preference number: 4 (lower is better)
Translates to: RKEKQGTSFLDGPKIQFIWKEAL*LISDVW
Trigger: CCAGACATCACTAATCAGTCACAGCGCTTCTTTCCA...TATAAACTGTATTTTTGGTCCATCCAGGAAGCTAGTCCCTTGTTTCTCCTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR TCA 90 bp AGAAAGGAGAAACAAGGGACTAGCTTCCTGGATGGACCAAAAATACAGTTTATATTCTACTCTGTTATTTaGGAGCCCCCGGTTGACAGA +
Preference number: 4 (lower is better)
Translates to: RKEKQGTSFLDGPKIQFIFYSVI*EPPVDR
Trigger: TCTGTCAACCGGGGGCTCTCAAATAACAGAGTAGAA...TATAAACTGTATTTTTGGTCCATCCAGGAAGCTAGTCCCTTGTTTCTCCTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR GCA 90 bp AGCTTCCTGGATGGACCAAAAATACAGTTTATAGACTGTTTCAATCCTAAAACTGGTTATAGACTGGTATaGCTCAGCACCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SFLDGPKIQFIDCFNPKTGYRLV*LSTCSS
Trigger: GCTGCTGCAGGTGCTGAGGCATACCAGTCTATAACC...AGTTTTAGGATTGAAACAGTCTATAAACTGTATTTTTGGTCCATCCAGGAAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR GCA 90 bp AGAAAGGAGAAACAAGGGACTAGCTTCCTGGATGGACCAAAAATACAGTTTATATTATGTTCTCTTCACTaGCCAAGGTGGAGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: RKEKQGTSFLDGPKIQFILCSLH*PRWSLA
Trigger: AGCCAGACTCCACCTTGGGCAGTGAAGAGAACATAA...TATAAACTGTATTTTTGGTCCATCCAGGAAGCTAGTCCCTTGTTTCTCCTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR TCA 90 bp AGCTTCCTGGATGGACCAAAAATACAGTTTATAGACTGTTTCAATCCTAAAACTCTTCAGCACTGTTTCTaGAGGTGCAGACGCTACAAT +
Preference number: 4 (lower is better)
Translates to: SFLDGPKIQFIDCFNPKTLQHCF*RCRRYN
Trigger: ATTGTAGCGTCTGCACCTTCAGAAACAGTGCTGAAG...AGTTTTAGGATTGAAACAGTCTATAAACTGTATTTTTGGTCCATCCAGGAAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR TCA 90 bp CATGTAGAAAGGAGAAACAAGGGACTAGCTTCCTGGATGGACCAAAAATACAGTTGCTTGAAATGTCTCTaGAGTACTACAAACTCTGTA +
Preference number: 4 (lower is better)
Translates to: HVERRNKGLASWMDQKYSCLKCL*STTNSV
Trigger: TACAGAGTTTGTAGTACTTCAGAGACATTTCAAGCA...ACTGTATTTTTGGTCCATCCAGGAAGCTAGTCCCTTGTTTCTCCTTTCTACATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR TCA 90 bp AGAAAGGAGAAACAAGGGACTAGCTTCCTGGATGGACCAAAAATACAGTTTATATTCCGGTGTCATCAGTaGAGCATCAGAATGAAAGTT +
Preference number: 4 (lower is better)
Translates to: RKEKQGTSFLDGPKIQFIFRCHQ*SIRMKV
Trigger: AACTTTCATTCTGATGCTTCACTGATGACACCGGAA...TATAAACTGTATTTTTGGTCCATCCAGGAAGCTAGTCCCTTGTTTCTCCTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR GCA 90 bp AGCTTCCTGGATGGACCAAAAATACAGTTTATAGACTGTTTCAATCCTAAAACTCCTGTAAAGACCAAGTaGTTGCTTTGGTCCACACCT +
Preference number: 4 (lower is better)
Translates to: SFLDGPKIQFIDCFNPKTPVKTK*LLWSTP
Trigger: AGGTGTGGACCAAAGCAAGCACTTGGTCTTTACAGG...AGTTTTAGGATTGAAACAGTCTATAAACTGTATTTTTGGTCCATCCAGGAAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp AGAAACGTCAAGCAGGTGTCAAAAATCCCACTGGACTTTATTTACATGCAGGCTGACCACAGCAACAAATaGCACTGCTTTATAATCTAT +
Preference number: 4 (lower is better)
Translates to: RNVKQVSKIPLDFIYMQADHSNK*HCFIIY
Trigger: ATAGATTATAAAGCAGTGCCATTTGTTGCTGTGGTC...AGCCTGCATGTAAATAAAGTCCAGTGGGATTTTTGACACCTGCTTGACGTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp AGCTTCCTGGATGGACCAAAAATACAGTTTATAGACTGTTTCAATCCTAAAACTGTGGGCTTCCTTCAGTaGTTAGCAAACAGAACCTTC +
Preference number: 4 (lower is better)
Translates to: SFLDGPKIQFIDCFNPKTVGFLQ*LANRTF
Trigger: GAAGGTTCTGTTTGCTAACCACTGAAGGAAGCCCAC...AGTTTTAGGATTGAAACAGTCTATAAACTGTATTTTTGGTCCATCCAGGAAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp AGCTTCCTGGATGGACCAAAAATACAGTTTATAGACTGTTTCAATCCTAAAACTCTTGTAGTTAATGCCTaGAGAGAGGCACTATCAGGC +
Preference number: 4 (lower is better)
Translates to: SFLDGPKIQFIDCFNPKTLVVNA*REALSG
Trigger: GCCTGATAGTGCCTCTCTCCAGGCATTAACTACAAG...AGTTTTAGGATTGAAACAGTCTATAAACTGTATTTTTGGTCCATCCAGGAAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477973.4
3UTR CAA 72 bp GCCTTCTTGGATTCATGCAGTTCCACAATTGAAGTGTaGATTAAAAACTGCCTTGAAGGGTTTCCCAGTTAT +
Preference number: 4 (lower is better)
Translates to: AFLDSCSSTIEV*IKNCLEGFPSY
Trigger: ATAACTGGGAAACCCTTCAAGGCAGTTTTTAATCAACACTTCAATTGTGGAACTGCATGAATCCAAGAAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR TCA 90 bp AGCTTCCTGGATGGACCAAAAATACAGTTTATAGACTGTTTCAATCCTAAAACTGCAGTGCAACCTACATaGGTTTGGTGGCATTTAAGT +
Preference number: 4 (lower is better)
Translates to: SFLDGPKIQFIDCFNPKTAVQPT*VWWHLS
Trigger: ACTTAAATGCCACCAAACTCATGTAGGTTGCACTGC...AGTTTTAGGATTGAAACAGTCTATAAACTGTATTTTTGGTCCATCCAGGAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR GCA 90 bp AGCTTCCTGGATGGACCAAAAATACAGTTTATAGACTGTTTCAATCCTAAAACTTTATTCCATTGCAAATaGAGGCTATCTGGAGCAGTC +
Preference number: 4 (lower is better)
Translates to: SFLDGPKIQFIDCFNPKTLFHCK*RLSGAV
Trigger: GACTGCTCCAGATAGCCTGCATTTGCAATGGAATAA...AGTTTTAGGATTGAAACAGTCTATAAACTGTATTTTTGGTCCATCCAGGAAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp AGAAAGGAGAAACAAGGGACTAGCTTCCTGGATGGACCAAAAATACAGTTTATAGAATACTTGGCATTCTaGAGCTACTTTAGTTACTTT +
Preference number: 4 (lower is better)
Translates to: RKEKQGTSFLDGPKIQFIEYLAF*SYFSYF
Trigger: AAAGTAACTAAAGTAGCTCCAGAATGCCAAGTATTC...TATAAACTGTATTTTTGGTCCATCCAGGAAGCTAGTCCCTTGTTTCTCCTTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp AGAAAGGAGAAACAAGGGACTAGCTTCCTGGATGGACCAAAAATACAGTTTATATTTTCCACTAATCTATaGGGTCCAATCACTTTACAT +
Preference number: 4 (lower is better)
Translates to: RKEKQGTSFLDGPKIQFIFSTNL*GPITLH
Trigger: ATGTAAAGTGATTGGACCCCATAGATTAGTGGAAAA...TATAAACTGTATTTTTGGTCCATCCAGGAAGCTAGTCCCTTGTTTCTCCTTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CCA 90 bp AGAAAGGAGAAACAAGGGACTAGCTTCCTGGATGGACCAAAAATACAGTTTATATACAAGCTGTCTTTCTaGGCAAATGAAAAATATAGC +
Preference number: 4 (lower is better)
Translates to: RKEKQGTSFLDGPKIQFIYKLSF*ANEKYS
Trigger: GCTATATTTTTCATTTGCCCAGAAAGACAGCTTGTA...TATAAACTGTATTTTTGGTCCATCCAGGAAGCTAGTCCCTTGTTTCTCCTTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS GCA 90 bp TGGAGGAACGGGAGGAGCCCTTGTCTGTGCTCTCTGACCCCGAGCTaGTCTGGTTCTGCTGTTCTGACCCTGCACTGGAGGTCACTGTGG +
Preference number: 5 (lower is better)
Translates to: WRNGRSPCLCSLTPS*SGSAVLTLHWRSLW
Trigger: CCACAGTGACCTCCAGTGCAGGGTCAGAACAGCAGAACCAGAGCAGCTCGGGGTCAGAGAGCACAGACAAGGGCTCCTCCCGTTCCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000477973.4
ENST00000628983.2
ENST00000643872.1
ENST00000676660.1
ENST00000676841.1
ENST00000677329.1
CDS GCA 90 bp ACATGTCGCCCTTTGGCGTGGAGGAACGGGAGGAGCCCTTGTCTGTaGTCTCTGACCCCGAGCTGCTCTGGTTCTGCTGTTCTGACCCTG +
Preference number: 5 (lower is better)
Translates to: TCRPLAWRNGRSPCL*SLTPSCSGSAVLTL
Trigger: CAGGGTCAGAACAGCAGAACCAGAGCAGCTCGGGGTCAGAGAGCACAGACAAGGGCTCCTCCCGTTCCTCCACGCCAAAGGGCGACATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000477973.4
ENST00000628983.2
ENST00000643872.1
ENST00000676660.1
ENST00000676841.1
ENST00000677329.1
CDS CCA 90 bp GAACGGGAGGAGCCCTTGTCTGTGCTCTCTGACCCCGAGCTGCTCTaGTTCTGCTGTTCTGACCCTGCACTGGAGGTCACTGTGGATGAG +
Preference number: 5 (lower is better)
Translates to: EREEPLSVLSDPELL*FCCSDPALEVTVDE
Trigger: CTCATCCACAGTGACCTCCAGTGCAGGGTCAGAACAGCAGAACCAGAGCAGCTCGGGGTCAGAGAGCACAGACAAGGGCTCCTCCCGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000477973.4
ENST00000628983.2
ENST00000643872.1
ENST00000676660.1
ENST00000676841.1
ENST00000677329.1
CDS GCA 90 bp GAGGAGCCCTTGTCTGTGCTCTCTGACCCCGAGCTGCTCTGGTTCTaGTGTTCTGACCCTGCACTGGAGGTCACTGTGGATGAGGATGTC +
Preference number: 5 (lower is better)
Translates to: EEPLSVLSDPELLWF*CSDPALEVTVDEDV
Trigger: GACATCCTCATCCACAGTGACCTCCAGTGCAGGGTCAGAACAGCAGAACCAGAGCAGCTCGGGGTCAGAGAGCACAGACAAGGGCTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000477973.4
ENST00000628983.2
ENST00000643872.1
ENST00000676660.1
ENST00000676841.1
ENST00000677329.1
CDS-3UTR CAA 90 bp GGCTGCAGGCGCGCAAGCCGTTCACCACTGGAGTTCCTACCACAGCAGGGGATTATAATGACGGTGACGTaGCCCACAGTTACTGCCAAC +
Preference number: 5 (lower is better)
Translates to: GCRRASRSPLEFLPQQGIIMTVT*PTVTAN
Trigger: GTTGGCAGTAACTGTGGGCAACGTCACCGTCATTAT...AATCCCCTGCTGTGGTAGGAACTCCAGTGGTGAACGGCTTGCGCGCCTGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS CCA 90 bp TCTCTGACCCCGAGCTGCTCTGGTTCTGCTGTTCTGACCCTGCACTaGAGGTCACTGTGGATGAGGATGTCGATGAGGAGCGAGTCTTTT +
Preference number: 5 (lower is better)
Translates to: SLTPSCSGSAVLTLH*RSLWMRMSMRSESF
Trigger: AAAAGACTCGCTCCTCATCGACATCCTCATCCACAGTGACCTCCAGTGCAGGGTCAGAACAGCAGAACCAGAGCAGCTCGGGGTCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000477973.4
ENST00000628983.2
ENST00000643872.1
ENST00000676660.1
ENST00000676841.1
ENST00000677329.1
CDS-3UTR CAA 90 bp ACCAGAGCCCTCCTGCAGTATCTAGTTGTCTATGTCCATTGTCCTCTCCTGACACTGACATGTCGCCCTTaGGCGTGGAGGAACGGGAGG +
Preference number: 5 (lower is better)
Translates to: TRALLQYLVVYVHCPLLTLTCRP*AWRNGR
Trigger: CCTCCCGTTCCTCCACGCCAAAGGGCGACATGTCAG...TGTCAGGAGAGGACAATGGACATAGACAACTAGATACTGCAGGAGGGCTCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CAA 90 bp GGCTGCAGGCGCGCAAGCCGTTCACCACTGGAGTTCCTACCACAGCAGGGGATTAAGGAACCTTTCCTGTaGGCTACTCAATTCAAGCTG +
Preference number: 5 (lower is better)
Translates to: GCRRASRSPLEFLPQQGIKEPFL*ATQFKL
Trigger: CAGCTTGAATTGAGTAGCCAACAGGAAAGGTTCCTT...AATCCCCTGCTGTGGTAGGAACTCCAGTGGTGAACGGCTTGCGCGCCTGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS TCA 90 bp GGTGGTGGGGTGGCATACTGTTGTGCCACTTGTTGTGCCACCAGCTaGGAATTGATCCGAGGTTTTCTGGTGGAGGTGCCTTTCCTCACA +
Preference number: 5 (lower is better)
Translates to: GGGVAYCCATCCATS*ELIRGFLVEVPFLT
Trigger: TGTGAGGAAAGGCACCTCCACCAGAAAACCTCGGATCAATTCTCAGCTGGTGGCACAACAAGTGGCACAACAGTATGCCACCCCACCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS GCA 90 bp AAGTCTGTGATAATGACGGTGACGTTGCCCACAGTTACTGCCAACTaGTGTGCAGTGCTCCTGTCCACGTTTTTCAGCCGGGGCCTTGAG +
Preference number: 5 (lower is better)
Translates to: KSVIMTVTLPTVTAN*CAVLLSTFFSRGLE
Trigger: CTCAAGGCCCCGGCTGAAAAACGTGGACAGGAGCACTGCACAGCAGTTGGCAGTAACTGTGGGCAACGTCACCGTCATTATCACAGACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000477973.4
ENST00000628983.2
ENST00000643872.1
ENST00000676660.1
ENST00000676841.1
ENST00000677329.1
CDS-3UTR CAA 90 bp CACACCTGGTATGGGAGACAATTCCCATCCTCCTCCAAAGGATGGTACCAGTGCTGGGGTGGCATACTGTaGTGCCACTTGTTGTGCCAC +
Preference number: 5 (lower is better)
Translates to: HTWYGRQFPSSSKGWYQCWGGIL*CHLLCH
Trigger: GTGGCACAACAAGTGGCACAACAGTATGCCACCCCA...GCACTGGTACCATCCTTTGGAGGAGGATGGGAATTGTCTCCCATACCAGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CAA 90 bp AGAGCAAGTCAGGTAAGCTCTGTGTGCGCGCACACGCACGAGTGTGAAAGATTGGGGTTTCCCAGTTATTaGGGGTGGGTTTCGTCCAGG +
Preference number: 5 (lower is better)
Translates to: RASQVSSVCAHTHECERLGFPSY*GWVSSR
Trigger: CCTGGACGAAACCCACCCCAAATAACTGGGAAACCC...CAATCTTTCACACTCGTGCGTGTGCGCGCACACAGAGCTTACCTGACTTGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CAA 90 bp AGTAATCGTCAGGGTGCGAAATTCCTTGGTGGCCAGATGCCCATGGCAAGCAGATTTTCAGCCGGGGCCTaGAGGTGTGATTTGTTTCGC +
Preference number: 5 (lower is better)
Translates to: SNRQGAKFLGGQMPMASRFSAGA*RCDLFR
Trigger: GCGAAACAAATCACACCTCAAGGCCCCGGCTGAAAA...TCTGCTTGCCATGGGCATCTGGCCACCAAGGAATTTCGCACCCTGACGATTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CAA 90 bp GCTCTGTGTGCGCGCACACGCACGAGTGTGAAAGATTGCGTGGTATTAAAACAAAGGGTGCGAAATTCCTaGGTGGCCAGATGCCCATGG +
Preference number: 5 (lower is better)
Translates to: ALCARTRTSVKDCVVLKQRVRNS*VARCPW
Trigger: CCATGGGCATCTGGCCACCAAGGAATTTCGCACCCT...TTGTTTTAATACCACGCAATCTTTCACACTCGTGCGTGTGCGCGCACACAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CAA 90 bp ACCAGAGCCCTCCTGCAGTATCTAGTTGTCTATGTCCATTGTCCTCTCCTGACACACAAGCCTGGGCCCTaGCTGGCTGAAGTCGTCATT +
Preference number: 5 (lower is better)
Translates to: TRALLQYLVVYVHCPLLTHKPGP*LAEVVI
Trigger: AATGACGACTTCAGCCAGCAAGGGCCCAGGCTTGTG...TGTCAGGAGAGGACAATGGACATAGACAACTAGATACTGCAGGAGGGCTCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CAA 90 bp AGAGCAAGTCAGGTAAGCTCTGTGTGCGCGCACACGCACGAGTGTGAAAGATTGCTGTTGTGCCACTTGTaGTGCCACCAGCTGAGAATT +
Preference number: 5 (lower is better)
Translates to: RASQVSSVCAHTHECERLLLCHL*CHQLRI
Trigger: AATTCTCAGCTGGTGGCACAACAAGTGGCACAACAG...CAATCTTTCACACTCGTGCGTGTGCGCGCACACAGAGCTTACCTGACTTGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CAA 90 bp AGGCACTATCAGGCAGAACATCACACCTGCATGTCTACCTTCACTCCGCAGGCTGCCTTGAGGTGTGATTaGTTTCGCTGGTCTTTGTTG +
Preference number: 5 (lower is better)
Translates to: RHYQAEHHTCMSTFTPQAALRCD*FRWSLL
Trigger: CAACAAAGACCAGCGAAACAAATCACACCTCAAGGC...AGCCTGCGGAGTGAAGGTAGACATGCAGGTGTGATGTTCTGCCTGATAGTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CAA 90 bp CTGCATGACTCAAGCAGAGCAAGTCAGGTAAGCTCTGTGTGCGCGCACACGCACAACAGGGGTTGTCTTTaGAGGATTTTCAGTCCTCAA +
Preference number: 5 (lower is better)
Translates to: LHDSSRASQVSSVCAHTHNRGCL*RIFSPQ
Trigger: TTGAGGACTGAAAATCCTCAAAAGACAACCCCTGTT...GTGCGTGTGCGCGCACACAGAGCTTACCTGACTTGCTCTGCTTGAGTCATGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CAA 90 bp GATTCTCCAGGGATGCAAGCAGCATGGGCAGGTGGAGGTTTTGAATTTCATACCGGAATGGCAAATGGGTaGCACTTCAGGAAGACGTGC +
Preference number: 5 (lower is better)
Translates to: DSPGMQAAWAGGGFEFHTGMANG*HFRKTC
Trigger: GCACGTCTTCCTGAAGTGCAACCCATTTGCCATTCC...GGTATGAAATTCAAAACCTCCACCTGCCCATGCTGCTTGCATCCCTGGAGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CAA 90 bp AGGCACTATCAGGCAGAACATCACACCTGCATGTCTACCTTCACTCCGCAGGCTTATCAAGCACCAGCGTaGCCATGGATTGGTTTCAAA +
Preference number: 5 (lower is better)
Translates to: RHYQAEHHTCMSTFTPQAYQAPA*PWIGFK
Trigger: TTTGAAACCAATCCATGGCAACGCTGGTGCTTGATA...AGCCTGCGGAGTGAAGGTAGACATGCAGGTGTGATGTTCTGCCTGATAGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CAA 90 bp CTGCATGACTCAAGCAGAGCAAGTCAGGTAAGCTCTGTGTGCGCGCACACGCACAACTGTTCAGCTCCATaGTCATACTCTAAATGTTGG +
Preference number: 5 (lower is better)
Translates to: LHDSSRASQVSSVCAHTHNCSAP*SYSKCW
Trigger: CCAACATTTAGAGTATGACAATGGAGCTGAACAGTT...GTGCGTGTGCGCGCACACAGAGCTTACCTGACTTGCTCTGCTTGAGTCATGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CAA 90 bp CTGCATGACTCAAGCAGAGCAAGTCAGGTAAGCTCTGTGTGCGCGCACACGCACAATCGGGGATGGATCTaGACATGTTTTAAGTGGTTT +
Preference number: 5 (lower is better)
Translates to: LHDSSRASQVSSVCAHTHNRGWI*TCFKWF
Trigger: AAACCACTTAAAACATGTCAAGATCCATCCCCGATT...GTGCGTGTGCGCGCACACAGAGCTTACCTGACTTGCTCTGCTTGAGTCATGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CAA 90 bp ACCAGAGCCCTCCTGCAGTATCTAGTTGTCTATGTCCATTGTCCTCTCCTGACAGTAAAGACCAAGTGCTaGCTTTGGTCCACACCTGGT +
Preference number: 5 (lower is better)
Translates to: TRALLQYLVVYVHCPLLTVKTKC*LWSTPG
Trigger: ACCAGGTGTGGACCAAAGCAAGCACTTGGTCTTTAC...TGTCAGGAGAGGACAATGGACATAGACAACTAGATACTGCAGGAGGGCTCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CAA 90 bp ACCAGAGCCCTCCTGCAGTATCTAGTTGTCTATGTCCATTGTCCTCTCCTGACACAGAAAGATTCATCATaGACTGCTGACATGTCGCCC +
Preference number: 5 (lower is better)
Translates to: TRALLQYLVVYVHCPLLTQKDSS*TADMSP
Trigger: GGGCGACATGTCAGCAGTCAATGATGAATCTTTCTG...TGTCAGGAGAGGACAATGGACATAGACAACTAGATACTGCAGGAGGGCTCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CAA 90 bp AGGCACTATCAGGCAGAACATCACACCTGCATGTCTACCTTCACTCCGCAGGCTACATTGTCCATGCATTaGAGAATAGGACCACAGCAA +
Preference number: 5 (lower is better)
Translates to: RHYQAEHHTCMSTFTPQATLSMH*RIGPQQ
Trigger: TTGCTGTGGTCCTATTCTCAAATGCATGGACAATGT...AGCCTGCGGAGTGAAGGTAGACATGCAGGTGTGATGTTCTGCCTGATAGTGCCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CAA 90 bp AGGCACTATCAGGCAGAACATCACACCTGCATGTCTACCTTCACTCCGCAGGCTTCAGAATGTCAGACTTaGGTTTGGTTTTCTTGTTGG +
Preference number: 5 (lower is better)
Translates to: RHYQAEHHTCMSTFTPQASECQT*VWFSCW
Trigger: CCAACAAGAAAACCAAACCAAAGTCTGACATTCTGA...AGCCTGCGGAGTGAAGGTAGACATGCAGGTGTGATGTTCTGCCTGATAGTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CAA 90 bp AGTAATCGTCAGGGTGCGAAATTCCTTGGTGGCCAGATGCCCATGGCAAGCAGACAAGAACAGAACTGCTaGCGCATTAAAAACTGTTCA +
Preference number: 5 (lower is better)
Translates to: SNRQGAKFLGGQMPMASRQEQNC*RIKNCS
Trigger: TGAACAGTTTTTAATGCGCAAGCAGTTCTGTTCTTG...TCTGCTTGCCATGGGCATCTGGCCACCAAGGAATTTCGCACCCTGACGATTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CAA 90 bp AGTAATCGTCAGGGTGCGAAATTCCTTGGTGGCCAGATGCCCATGGCAAGCAGAGACGAAGAATGGAACTaGCTGTTTTATCAGAACAGA +
Preference number: 5 (lower is better)
Translates to: SNRQGAKFLGGQMPMASRDEEWN*LFYQNR
Trigger: TCTGTTCTGATAAAACAGCAAGTTCCATTCTTCGTC...TCTGCTTGCCATGGGCATCTGGCCACCAAGGAATTTCGCACCCTGACGATTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CAA 90 bp AGAAACGTCAAGCAGGTGTCAAAAATCCCACTGGACTTTATTTACATGCAGGCTGACCAAGTGCTTGCTTaGGTCCACACCTGGTATGGG +
Preference number: 5 (lower is better)
Translates to: RNVKQVSKIPLDFIYMQADQVLA*VHTWYG
Trigger: CCCATACCAGGTGTGGACCAAAGCAAGCACTTGGTC...AGCCTGCATGTAAATAAAGTCCAGTGGGATTTTTGACACCTGCTTGACGTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CAA 90 bp CACACCTGGTATGGGAGACAATTCCCATCCTCCTCCAAAGGATGGTACCAGTGCGTTTTGAACAGGAAGTaGAACTCTTTGAAGAGTTGG +
Preference number: 5 (lower is better)
Translates to: HTWYGRQFPSSSKGWYQCVLNRK*NSLKSW
Trigger: CCAACTCTTCAAAGAGTTCAACTTCCTGTTCAAAAC...GCACTGGTACCATCCTTTGGAGGAGGATGGGAATTGTCTCCCATACCAGGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS TCA 90 bp CATAGTTTTCACAATTCCATGTGCAATTTCAGAAAGATTCATCATTaGCTGCTGACATGTCGCCCTTTGGCGTGGAGGAACGGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: HSFHNSMCNFRKIHH*LLTCRPLAWRNGRS
Trigger: GCTCCTCCCGTTCCTCCACGCCAAAGGGCGACATGTCAGCAGTCAATGATGAATCTTTCTGAAATTGCACATGGAATTGTGAAAACTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477973.4
ENST00000676660.1
ENST00000676841.1
ENST00000677329.1
CDS-3UTR CAA 90 bp AGAGCAAGTCAGGTAAGCTCTGTGTGCGCGCACACGCACGAGTGTGAAAGATTGAATTTACACGAATACTaGGCATTCTGGAGCTACTTT +
Preference number: 5 (lower is better)
Translates to: RASQVSSVCAHTHECERLNLHEY*AFWSYF
Trigger: AAAGTAGCTCCAGAATGCCAAGTATTCGTGTAAATT...CAATCTTTCACACTCGTGCGTGTGCGCGCACACAGAGCTTACCTGACTTGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CAA 90 bp AGGCACTATCAGGCAGAACATCACACCTGCATGTCTACCTTCACTCCGCAGGCTCCTTCCTTTACATCATaGCAATCTATCTCAAAGGTT +
Preference number: 5 (lower is better)
Translates to: RHYQAEHHTCMSTFTPQAPSFTS*QSISKV
Trigger: AACCTTTGAGATAGATTGCAATGATGTAAAGGAAGG...AGCCTGCGGAGTGAAGGTAGACATGCAGGTGTGATGTTCTGCCTGATAGTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS TCA 90 bp GGATGGAGAAAGGGACTGGAGAAAAATAACTGGACAGACCAAGTCTaGCTCATCAATGGGAGAGTCAGCGGTGGAGGATTAGAAAACAAA +
Preference number: 5 (lower is better)
Translates to: GWRKGLEKNNWTDQV*LINGRVSGGGLENK
Trigger: TTTGTTTTCTAATCCTCCACCGCTGACTCTCCCATTGATGAGTCAGACTTGGTCTGTCCAGTTATTTTTCTCCAGTCCCTTTCTCCATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676660.1
CDS-3UTR CAA 90 bp CATGTAGAAAGGAGAAACAAGGGACTAGCTTCCTGGATGGACCAAAAATACAGTATACTGTTGTGCCACTaGTTGTGCCACCAGCTGAGA +
Preference number: 5 (lower is better)
Translates to: HVERRNKGLASWMDQKYSILLCH*LCHQLR
Trigger: TCTCAGCTGGTGGCACAACAAGTGGCACAACAGTAT...ACTGTATTTTTGGTCCATCCAGGAAGCTAGTCCCTTGTTTCTCCTTTCTACATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CAA 90 bp AGAAAGGAGAAACAAGGGACTAGCTTCCTGGATGGACCAAAAATACAGTTTATATGGGTAGGGGGACGGTaGGGGTCAATGTCACTTACT +
Preference number: 5 (lower is better)
Translates to: RKEKQGTSFLDGPKIQFIWVGGR*GSMSLT
Trigger: AGTAAGTGACATTGACCCCAACCGTCCCCCTACCCA...TATAAACTGTATTTTTGGTCCATCCAGGAAGCTAGTCCCTTGTTTCTCCTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CAA 90 bp AGAAAGGAGAAACAAGGGACTAGCTTCCTGGATGGACCAAAAATACAGTTTATATTTGAGAGCCCCCGGTaGACAGAACCAGTAGGACAG +
Preference number: 5 (lower is better)
Translates to: RKEKQGTSFLDGPKIQFIFESPR*TEPVGQ
Trigger: CTGTCCTACTGGTTCTGTCAACCGGGGGCTCTCAAA...TATAAACTGTATTTTTGGTCCATCCAGGAAGCTAGTCCCTTGTTTCTCCTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS TCA 90 bp GGTGGTGGGGTGGCATACTGTTGTGCCACTTGTTGTGCCACCAGCTaGGAATTGATCCGAGGTTTTAATATAATAAACTCTCCAAGTTTA +
Preference number: 5 (lower is better)
Translates to: GGGVAYCCATCCATS*ELIRGFNIINSPSL
Trigger: TAAACTTGGAGAGTTTATTATATTAAAACCTCGGATCAATTCTCAGCTGGTGGCACAACAAGTGGCACAACAGTATGCCACCCCACCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677329.1
CDS TCA 90 bp AAGAGTGCTGAGAACACTACTTCTTTCAAGCCGTCAAGATTATACTaGCTGACAGCTTTCAAGTACTCCTGCTGCAGAGGGTTAATCTCA +
Preference number: 5 (lower is better)
Translates to: KSAENTTSFKPSRLY*LTAFKYSCCRGLIS
Trigger: TGAGATTAACCCTCTGCAGCAGGAGTACTTGAAAGCTGTCAGTCAGTATAATCTTGACGGCTTGAAAGAAGTAGTGTTCTCAGCACTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676660.1
CDS GCA 90 bp TGTTTCGCTGGTCTTTGTTGTAGCATTTGCAGACTGTATGCTGTTTaGTTCACTAGGAGGATCTTTCAGAATGTCAGACTTTGGTTTGGT +
Preference number: 5 (lower is better)
Translates to: CFAGLCCSICRLYAV*FTRRIFQNVRLWFG
Trigger: ACCAAACCAAAGTCTGACATTCTGAAAGATCCTCCTAGTGAAGCAAACAGCATACAGTCTGCAAATGCTACAACAAAGACCAGCGAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477973.4
ENST00000628983.2
ENST00000643872.1
ENST00000676660.1
ENST00000677329.1
CDS-3UTR CAA 90 bp AGAAAGGAGAAACAAGGGACTAGCTTCCTGGATGGACCAAAAATACAGTTTATAAGTTGTCTATGTCCATaGTCCTCTCCTGACAGAAGC +
Preference number: 5 (lower is better)
Translates to: RKEKQGTSFLDGPKIQFISCLCP*SSPDRS
Trigger: GCTTCTGTCAGGAGAGGACAATGGACATAGACAACT...TATAAACTGTATTTTTGGTCCATCCAGGAAGCTAGTCCCTTGTTTCTCCTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS GCA 90 bp TGTTTCGCTGGTCTTTGTTGTAGCATTTGCAGACTGTATGCTGTTTaGTTCACTAGGAGGATCTTTCAGAATGTCAGACTTTGGTCTAAA +
Preference number: 5 (lower is better)
Translates to: CFAGLCCSICRLYAV*FTRRIFQNVRLWSK
Trigger: TTTAGACCAAAGTCTGACATTCTGAAAGATCCTCCTAGTGAAGCAAACAGCATACAGTCTGCAAATGCTACAACAAAGACCAGCGAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676841.1
CDS TCA 90 bp TATTGTTCACAAATTCTAAGAGATGCCAAACACTTTCACAATGCATaGCCATTCACAGCCCTAAATGAGAAAGGGAGACAGGAATGCCTA +
Preference number: 5 (lower is better)
Translates to: YCSQILRDAKHFHNA*PFTALNEKGRQECL
Trigger: TAGGCATTCCTGTCTCCCTTTCTCATTTAGGGCTGTGAATGGTCATGCATTGTGAAAGTGTTTGGCATCTCTTAGAATTTGTGAACAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676660.1
CDS-3UTR CAA 90 bp AGCTTCCTGGATGGACCAAAAATACAGTTTATAGACTGTTTCAATCCTAAAACTTGGTCTGACCCTGTTTaGAACAGGAAGTTGAACTCT +
Preference number: 5 (lower is better)
Translates to: SFLDGPKIQFIDCFNPKTWSDPV*NRKLNS
Trigger: AGAGTTCAACTTCCTGTTCAAAACAGGGTCAGACCA...AGTTTTAGGATTGAAACAGTCTATAAACTGTATTTTTGGTCCATCCAGGAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS-3UTR CAA 90 bp AGAAAGGAGAAACAAGGGACTAGCTTCCTGGATGGACCAAAAATACAGTTTATAGTTTTGATTAGAATATaGTGTGGGTGTCAAGATGTC +
Preference number: 5 (lower is better)
Translates to: RKEKQGTSFLDGPKIQFIVLIRI*CGCQDV
Trigger: GACATCTTGACACCCACACAATATTCTAATCAAAAC...TATAAACTGTATTTTTGGTCCATCCAGGAAGCTAGTCCCTTGTTTCTCCTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS GCA 72 bp CCTTTGGCGTGGAGGAACGGGAGGAGCCCTTGTCTGTaGTCTCTGACCCCGAGCTGCTCTGGTTCTGCTGTT +
Preference number: 6 (lower is better)
Translates to: PLAWRNGRSPCL*SLTPSCSGSAV
Trigger: AACAGCAGAACCAGAGCAGCTCGGGGTCAGAGAGCACAGACAAGGGCTCCTCCCGTTCCTCCACGCCAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000477973.4
ENST00000628983.2
ENST00000643872.1
ENST00000676660.1
ENST00000676841.1
ENST00000677329.1
CDS CAA 90 bp ACTGCTGACATGTCGCCCTTTGGCGTGGAGGAACGGGAGGAGCCCTaGTCTGTGCTCTCTGACCCCGAGCTGCTCTGGTTCTGCTGTTCT +
Preference number: 6 (lower is better)
Translates to: TADMSPFGVEEREEP*SVLSDPELLWFCCS
Trigger: AGAACAGCAGAACCAGAGCAGCTCGGGGTCAGAGAGCACAGACAAGGGCTCCTCCCGTTCCTCCACGCCAAAGGGCGACATGTCAGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000477973.4
ENST00000628983.2
ENST00000643872.1
ENST00000676660.1
ENST00000676841.1
ENST00000677329.1
CDS GCA 72 bp GACGGTGACGTTGCCCACAGTTACTGCCAACTGCTGTaGAGTGCTCCTGTCCACGTTTTTCAGCCGGGGCCT +
Preference number: 6 (lower is better)
Translates to: DGDVAHSYCQLL*SAPVHVFQPGP
Trigger: AGGCCCCGGCTGAAAAACGTGGACAGGAGCACTGCACAGCAGTTGGCAGTAACTGTGGGCAACGTCACCGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000477973.4
ENST00000628983.2
ENST00000643872.1
ENST00000676660.1
ENST00000676841.1
ENST00000677329.1
CDS GCA 72 bp TTGTCTGTGCTCTCTGACCCCGAGCTGCTCTGGTTCTaGTGTTCTGACCCTGCACTGGAGGTCACTGTGGAT +
Preference number: 6 (lower is better)
Translates to: LSVLSDPELLWF*CSDPALEVTVD
Trigger: ATCCACAGTGACCTCCAGTGCAGGGTCAGAACAGCAGAACCAGAGCAGCTCGGGGTCAGAGAGCACAGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000477973.4
ENST00000628983.2
ENST00000643872.1
ENST00000676660.1
ENST00000676841.1
ENST00000677329.1
CDS GCA 72 bp GGGTGGTGGGGTGGCATACTGTTGTGCCACTTGTTGTaGCACCAGCTGAGAATTGATCCGAGGCTTCCTGGT +
Preference number: 6 (lower is better)
Translates to: GWWGGILLCHLL*HQLRIDPRLPG
Trigger: ACCAGGAAGCCTCGGATCAATTCTCAGCTGGTGGCACAACAAGTGGCACAACAGTATGCCACCCCACCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000628983.2
ENST00000643872.1
CDS CAA 72 bp AGGGGGTGGTGGGGTGGCATACTGTTGTGCCACTTGTaGTGCCACCAGCTGAGAATTGATCCGAGGCTTCCT +
Preference number: 6 (lower is better)
Translates to: RGWWGGILLCHL*CHQLRIDPRLP
Trigger: AGGAAGCCTCGGATCAATTCTCAGCTGGTGGCACAACAAGTGGCACAACAGTATGCCACCCCACCACCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000628983.2
ENST00000643872.1
CDS CAA 72 bp ACAATCCCAAAACCCTTCGTCTGCGGCAGGTTTCGCTaGTCTTTTTGGCCTGGTCGGGCTCTTCTTGTCGCC +
Preference number: 6 (lower is better)
Translates to: TIPKPFVCGRFR*SFWPGRALLVA
Trigger: GGCGACAAGAAGAGCCCGACCAGGCCAAAAAGACAAGCGAAACCTGCCGCAGACGAAGGGTTTTGGGATTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000628983.2
ENST00000643872.1
CDS TCA 72 bp ACTGTTGTGCCACTTGTTGTGCCACCAGCTGAGAATTaGTCCGAGGCTTCCTGGTGGAGGTGCCTTTCCTCA +
Preference number: 6 (lower is better)
Translates to: TVVPLVVPPAEN*SEASWWRCLSS
Trigger: TGAGGAAAGGCACCTCCACCAGGAAGCCTCGGATCAATTCTCAGCTGGTGGCACAACAAGTGGCACAACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000628983.2
ENST00000643872.1
CDS GCA 72 bp GGGTGGTGGGGTGGCATACTGTTGTGCCACTTGTTGTaGCACCAGCTGAGAATTGATCCGAGGTTTTCTGGT +
Preference number: 6 (lower is better)
Translates to: GWWGGILLCHLL*HQLRIDPRFSG
Trigger: ACCAGAAAACCTCGGATCAATTCTCAGCTGGTGGCACAACAAGTGGCACAACAGTATGCCACCCCACCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS CCA 72 bp GGTTCTGCTGTTCTGACCCTGCACTGGAGGTCACTGTaGATGAGGATGTCGATGAGGAGCGAGTCTTTTCCT +
Preference number: 6 (lower is better)
Translates to: GSAVLTLHWRSL*MRMSMRSESFP
Trigger: AGGAAAAGACTCGCTCCTCATCGACATCCTCATCCACAGTGACCTCCAGTGCAGGGTCAGAACAGCAGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000477973.4
ENST00000628983.2
ENST00000643872.1
ENST00000676660.1
ENST00000676841.1
ENST00000677329.1
CDS CAA 72 bp TTTAGGGGGTGGTGGGGTGGCATACTGTTGTGCCACTaGTTGTGCCACCAGCTGAGAATTGATCCGAGGCTT +
Preference number: 6 (lower is better)
Translates to: FRGWWGGILLCH*LCHQLRIDPRL
Trigger: AAGCCTCGGATCAATTCTCAGCTGGTGGCACAACAAGTGGCACAACAGTATGCCACCCCACCACCCCCTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000628983.2
ENST00000643872.1
CDS TCA 72 bp GTGGCATACTGTTGTGCCACTTGTTGTGCCACCAGCTaGGAATTGATCCGAGGTTTTCTGGTGGAGGTGCCT +
Preference number: 6 (lower is better)
Translates to: VAYCCATCCATS*ELIRGFLVEVP
Trigger: AGGCACCTCCACCAGAAAACCTCGGATCAATTCTCAGCTGGTGGCACAACAAGTGGCACAACAGTATGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS GCA 72 bp GGGTGGTGGGGTGGCATACTGTTGTGCCACTTGTTGTaGCACCAGCTGAGAATTGATCCGAGGTTTTCTGAA +
Preference number: 6 (lower is better)
Translates to: GWWGGILLCHLL*HQLRIDPRFSE
Trigger: TTCAGAAAACCTCGGATCAATTCTCAGCTGGTGGCACAACAAGTGGCACAACAGTATGCCACCCCACCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676660.1
CDS CAA 72 bp TTTAGGGGGTGGTGGGGTGGCATACTGTTGTGCCACTaGTTGTGCCACCAGCTGAGAATTGATCCGAGGTTT +
Preference number: 6 (lower is better)
Translates to: FRGWWGGILLCH*LCHQLRIDPRF
Trigger: AAACCTCGGATCAATTCTCAGCTGGTGGCACAACAAGTGGCACAACAGTATGCCACCCCACCACCCCCTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000477973.4
ENST00000676660.1
ENST00000677329.1
CDS TCA 72 bp ACTGTTGTGCCACTTGTTGTGCCACCAGCTGAGAATTaGTCCGAGGTTTTCTGGTGGAGGTGCCTTTCCTCA +
Preference number: 6 (lower is better)
Translates to: TVVPLVVPPAEN*SEVFWWRCLSS
Trigger: TGAGGAAAGGCACCTCCACCAGAAAACCTCGGATCAATTCTCAGCTGGTGGCACAACAAGTGGCACAACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477973.4
CDS TCA 72 bp AAGGGACTGGAGAAAAATAACTGGACAGACCAAGTCTaGCTCATCAATGGGAGAGTCAGCGGTGGAGGATTA +
Preference number: 6 (lower is better)
Translates to: KGLEKNNWTDQV*LINGRVSGGGL
Trigger: TAATCCTCCACCGCTGACTCTCCCATTGATGAGTCAGACTTGGTCTGTCCAGTTATTTTTCTCCAGTCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676660.1
CDS TCA 72 bp GAGAACACTACTTCTTTCAAGCCGTCAAGATTATACTaGCTGACAGCTTTCAAGTACTCCTGCTGCAGAGGG +
Preference number: 6 (lower is better)
Translates to: ENTTSFKPSRLY*LTAFKYSCCRG
Trigger: CCCTCTGCAGCAGGAGTACTTGAAAGCTGTCAGTCAGTATAATCTTGACGGCTTGAAAGAAGTAGTGTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676660.1
CDS GCA 72 bp GGTGTGATTTGTTTCGCTGGTCTTTGTTGTAGCATTTaGAGACTGTATGCTGTTTGCTTCACTAGGAGGATC +
Preference number: 6 (lower is better)
Translates to: GVICFAGLCCSI*RLYAVCFTRRI
Trigger: GATCCTCCTAGTGAAGCAAACAGCATACAGTCTGCAAATGCTACAACAAAGACCAGCGAAACAAATCACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000477973.4
ENST00000628983.2
ENST00000643872.1
ENST00000676660.1
ENST00000676841.1
ENST00000677329.1
CDS TCA 72 bp GTGGCATACTGTTGTGCCACTTGTTGTGCCACCAGCTaGGAATTGATCCGAGGTTTTAATATAATAAACTCT +
Preference number: 6 (lower is better)
Translates to: VAYCCATCCATS*ELIRGFNIINS
Trigger: AGAGTTTATTATATTAAAACCTCGGATCAATTCTCAGCTGGTGGCACAACAAGTGGCACAACAGTATGCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677329.1
CDS TCA 72 bp CAAATTCTAAGAGATGCCAAACACTTTCACAATGCATaGCCATTCACAGCCCTAAATGAGAAAGGGAGACAG +
Preference number: 6 (lower is better)
Translates to: QILRDAKHFHNA*PFTALNEKGRQ
Trigger: CTGTCTCCCTTTCTCATTTAGGGCTGTGAATGGTCATGCATTGTGAAAGTGTTTGGCATCTCTTAGAATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676660.1
CDS GCA 72 bp GGTCTTTGTTGTAGCATTTGCAGACTGTATGCTGTTTaGTTCACTAGGAGGATCTTTCAGAATGTCAGACTT +
Preference number: 6 (lower is better)
Translates to: GLCCSICRLYAV*FTRRIFQNVRL
Trigger: AAGTCTGACATTCTGAAAGATCCTCCTAGTGAAGCAAACAGCATACAGTCTGCAAATGCTACAACAAAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000477973.4
ENST00000628983.2
ENST00000643872.1
ENST00000676660.1
ENST00000676841.1
ENST00000677329.1
CDS GCA 72 bp TGGCTCTTAGCACTATTGTTCACAAATTCTAAGAGATaGCAAACACTTTCACAATGCATGACCATTCACAGC +
Preference number: 6 (lower is better)
Translates to: WLLALLFTNSKR*QTLSQCMTIHS
Trigger: GCTGTGAATGGTCATGCATTGTGAAAGTGTTTGGCATCTCTTAGAATTTGTGAACAATAGTGCTAAGAGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676660.1