RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RXFP3 (Homo sapiens)

Ensembl gene IDs: ENSG00000182631

Ensembl transcript IDs: ENST00000330120.5, ENST00000616205.2

Found 255 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGCGCCCCCACACTACTCAGCGTGGGAAGAGTAAGGAGAGGCTGTaGGGTGCGGAGCGGAGGTTGGCTGTCTGGCCCGTGGGGCTCGTC +
Preference number: 1 (lower is better)
Translates to: GRPHTTQRGKSKERL*GAERRLAVWPVGLV
Trigger: GACGAGCCCCACGGGCCAGACAGCCAACCTCCGCTCCGCACCCCACAGCCTCTCCTTACTCTTCCCACGCTGAGTAGTGTGGGGGCGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR GCA 90 bp GCAGCCCCGCAGCAAGTAGGACCTTGGCGCTGCTGCAGTCTCGTTTaGCAAGACGCAAAGGAGTGTTTGTGCCGACGGCTGCCCTCTCCG +
Preference number: 1 (lower is better)
Translates to: AAPQQVGPWRCCSLV*QDAKECLCRRLPSP
Trigger: CGGAGAGGGCAGCCGTCGGCACAAACACTCCTTTGCGTCTTGGCAAACGAGACTGCAGCAGCGCCAAGGTCCTACTTGCTGCGGGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR CCA 90 bp AAGAGTAAGGAGAGGCTGTGGGGTGCGGAGCGGAGGTTGGCTGTCTaGCCCGTGGGGCTCGTCTCTATCCCTTTGCCAATTTCCTCTCTC +
Preference number: 1 (lower is better)
Translates to: KSKERLWGAERRLAV*PVGLVSIPLPISSL
Trigger: GAGAGAGGAAATTGGCAAAGGGATAGAGACGAGCCCCACGGGCCAGACAGCCAACCTCCGCTCCGCACCCCACAGCCTCTCCTTACTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR GCA 90 bp AGCGGAGGTTGGCTGTCTGGCCCGTGGGGCTCGTCTCTATCCCTTTaGCAATTTCCTCTCTCCACCCGATTTCGAAGCATCTCCTCTCCA +
Preference number: 1 (lower is better)
Translates to: SGGWLSGPWGSSLSL*QFPLSTRFRSISSP
Trigger: TGGAGAGGAGATGCTTCGAAATCGGGTGGAGAGAGGAAATTGGCAAAGGGATAGAGACGAGCCCCACGGGCCAGACAGCCAACCTCCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR GCA 90 bp GCAGTCTCGTTTGCCAAGACGCAAAGGAGTGTTTGTGCCGACGGCTaGCCTCTCCGCAGAAGTCGCTGGAATAAACGGGCACAATTGTCT +
Preference number: 1 (lower is better)
Translates to: AVSFAKTQRSVCADG*PLRRSRWNKRAQLS
Trigger: AGACAATTGTGCCCGTTTATTCCAGCGACTTCTGCGGAGAGGGCAGCCGTCGGCACAAACACTCCTTTGCGTCTTGGCAAACGAGACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR GCA 90 bp GCCCTCTCCGCAGAAGTCGCTGGAATAAACGGGCACAATTGTCTGTaGATCATTTGGCTAAGCCCCGCTCCCCGTGCCAATTTCTCTACA +
Preference number: 1 (lower is better)
Translates to: ALSAEVAGINGHNCL*IIWLSPAPRANFST
Trigger: TGTAGAGAAATTGGCACGGGGAGCGGGGCTTAGCCAAATGATGCACAGACAATTGTGCCCGTTTATTCCAGCGACTTCTGCGGAGAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR CCA 90 bp CAAAGGAGTGTTTGTGCCGACGGCTGCCCTCTCCGCAGAAGTCGCTaGAATAAACGGGCACAATTGTCTGTGCATCATTTGGCTAAGCCC +
Preference number: 1 (lower is better)
Translates to: QRSVCADGCPLRRSR*NKRAQLSVHHLAKP
Trigger: GGGCTTAGCCAAATGATGCACAGACAATTGTGCCCGTTTATTCCAGCGACTTCTGCGGAGAGGGCAGCCGTCGGCACAAACACTCCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR CCA 90 bp TGGAGGTGGCTTTCCTTTGCCGTTTCTCCTGTGGGCGGACCAGGATaGTCAGTTCTTTTTCTTAACTCCAAAAGCGTTTCTTGCCTACCA +
Preference number: 1 (lower is better)
Translates to: WRWLSFAVSPVGGPG*SVLFLNSKSVSCLP
Trigger: TGGTAGGCAAGAAACGCTTTTGGAGTTAAGAAAAAGAACTGACCATCCTGGTCCGCCCACAGGAGAAACGGCAAAGGAAAGCCACCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR GCA 90 bp GGAATGATAATTGTCATAATGACTCCATTGGAGGTGGCTTTCCTTTaGCGTTTCTCCTGTGGGCGGACCAGGATGGTCAGTTCTTTTTCT +
Preference number: 1 (lower is better)
Translates to: GMIIVIMTPLEVAFL*RFSCGRTRMVSSFS
Trigger: AGAAAAAGAACTGACCATCCTGGTCCGCCCACAGGAGAAACGGCAAAGGAAAGCCACCTCCAATGGAGTCATTATGACAATTATCATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR-3UTR GCA 90 bp ATCCCCCTGCTAACGTCTGAGCTCCGGGGCTGTGCAGCTAGGTCGGGCTCAGGGGCAAAGGAGTGTTTGTaGCGACGGCTGCCCTCTCCG +
Preference number: 2 (lower is better)
Translates to: IPLLTSELRGCAARSGSGAKECL*RRLPSP
Trigger: CGGAGAGGGCAGCCGTCGGCACAAACACTCCTTTGC...CCCTGAGCCCGACCTAGCTGCACAGCCCCGGAGCTCAGACGTTAGCAGGGGGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR CAA 90 bp GGCAGCCCCGCAGCAAGTAGGACCTTGGCGCTGCTGCAGTCTCGTTaGCCAAGACGCAAAGGAGTGTTTGTGCCGACGGCTGCCCTCTCC +
Preference number: 2 (lower is better)
Translates to: GSPAASRTLALLQSR*PRRKGVFVPTAALS
Trigger: GGAGAGGGCAGCCGTCGGCACAAACACTCCTTTGCGTCTTGGCAAACGAGACTGCAGCAGCGCCAAGGTCCTACTTGCTGCGGGGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR CAA 90 bp GAGCGGAGGTTGGCTGTCTGGCCCGTGGGGCTCGTCTCTATCCCTTaGCCAATTTCCTCTCTCCACCCGATTTCGAAGCATCTCCTCTCC +
Preference number: 2 (lower is better)
Translates to: ERRLAVWPVGLVSIP*PISSLHPISKHLLS
Trigger: GGAGAGGAGATGCTTCGAAATCGGGTGGAGAGAGGAAATTGGCAAAGGGATAGAGACGAGCCCCACGGGCCAGACAGCCAACCTCCGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR-3UTR CCA 90 bp TTGTCTTCGCTTCTGGGCGCCCCCACACTACTCAGCGTGGGAAGAGTAAGGAGATGGCTGTCTGGCCCGTaGGGCTCGTCTCTATCCCTT +
Preference number: 2 (lower is better)
Translates to: LSSLLGAPTLLSVGRVRRWLSGP*GSSLSL
Trigger: AAGGGATAGAGACGAGCCCCACGGGCCAGACAGCCA...TCTCCTTACTCTTCCCACGCTGAGTAGTGTGGGGGCGCCCAGAAGCGAAGACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR-3UTR CCA 90 bp TTGGAGGTGGCTTTCCTTTGCCGTTTCTCCTGTGGGCGGACCAGGATGGTCAGTAGTAAGGAGAGGCTGTaGGGTGCGGAGCGGAGGTTG +
Preference number: 2 (lower is better)
Translates to: LEVAFLCRFSCGRTRMVSSKERL*GAERRL
Trigger: CAACCTCCGCTCCGCACCCCACAGCCTCTCCTTACT...ACTGACCATCCTGGTCCGCCCACAGGAGAAACGGCAAAGGAAAGCCACCTCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR-3UTR CCA 90 bp CATTGGAGGTGGCTTTCCTTTGCCGTTTCTCCTGTGGGCGGACCAGGATGGTCACCAGCTCTAGATTCCTaGGGCAGCCCCGCAGCAAGT +
Preference number: 2 (lower is better)
Translates to: HWRWLSFAVSPVGGPGWSPALDS*GSPAAS
Trigger: ACTTGCTGCGGGGCTGCCCCAGGAATCTAGAGCTGG...TGACCATCCTGGTCCGCCCACAGGAGAAACGGCAAAGGAAAGCCACCTCCAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR CAA 90 bp CTACCAGCTCTAGATTCCTGGGGCAGCCCCGCAGCAAGTAGGACCTaGGCGCTGCTGCAGTCTCGTTTGCCAAGACGCAAAGGAGTGTTT +
Preference number: 2 (lower is better)
Translates to: LPALDSWGSPAASRT*ALLQSRLPRRKGVF
Trigger: AAACACTCCTTTGCGTCTTGGCAAACGAGACTGCAGCAGCGCCAAGGTCCTACTTGCTGCGGGGCTGCCCCAGGAATCTAGAGCTGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR CAA 90 bp GACGGCTGCCCTCTCCGCAGAAGTCGCTGGAATAAACGGGCACAATaGTCTGTGCATCATTTGGCTAAGCCCCGCTCCCCGTGCCAATTT +
Preference number: 2 (lower is better)
Translates to: DGCPLRRSRWNKRAQ*SVHHLAKPRSPCQF
Trigger: AAATTGGCACGGGGAGCGGGGCTTAGCCAAATGATGCACAGACAATTGTGCCCGTTTATTCCAGCGACTTCTGCGGAGAGGGCAGCCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR-3UTR GCA 90 bp TCCATTGGAGGTGGCTTTCCTTTGCCGTTTCTCCTGTGGGCGGACCAGGATGGTGTAGGACCTTGGCGCTaGTGCAGTCTCGTTTGCCAA +
Preference number: 2 (lower is better)
Translates to: SIGGGFPLPFLLWADQDGVGPWR*CSLVCQ
Trigger: TTGGCAAACGAGACTGCAGCAGCGCCAAGGTCCTAC...ACCATCCTGGTCCGCCCACAGGAGAAACGGCAAAGGAAAGCCACCTCCAATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR CAA 90 bp TTCCCGCTGGCCCAGTCCGGAATGATAATTGTCATAATGACTCCATaGGAGGTGGCTTTCCTTTGCCGTTTCTCCTGTGGGCGGACCAGG +
Preference number: 2 (lower is better)
Translates to: FPLAQSGMIIVIMTP*EVAFLCRFSCGRTR
Trigger: CCTGGTCCGCCCACAGGAGAAACGGCAAAGGAAAGCCACCTCCAATGGAGTCATTATGACAATTATCATTCCGGACTGGGCCAGCGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR-3UTR CCA 90 bp CATTGGAGGTGGCTTTCCTTTGCCGTTTCTCCTGTGGGCGGACCAGGATGGTCACTCCGCAGAAGTCGCTaGAATAAACGGGCACAATTG +
Preference number: 2 (lower is better)
Translates to: HWRWLSFAVSPVGGPGWSLRRSR*NKRAQL
Trigger: CAATTGTGCCCGTTTATTCCAGCGACTTCTGCGGAG...TGACCATCCTGGTCCGCCCACAGGAGAAACGGCAAAGGAAAGCCACCTCCAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR CAA 90 bp CGGAATGATAATTGTCATAATGACTCCATTGGAGGTGGCTTTCCTTaGCCGTTTCTCCTGTGGGCGGACCAGGATGGTCAGTTCTTTTTC +
Preference number: 2 (lower is better)
Translates to: RNDNCHNDSIGGGFP*PFLLWADQDGQFFF
Trigger: GAAAAAGAACTGACCATCCTGGTCCGCCCACAGGAGAAACGGCAAAGGAAAGCCACCTCCAATGGAGTCATTATGACAATTATCATTCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR CCA 72 bp GAGAGGCTGTGGGGTGCGGAGCGGAGGTTGGCTGTCTaGCCCGTGGGGCTCGTCTCTATCCCTTTGCCAATT +
Preference number: 3 (lower is better)
Translates to: ERLWGAERRLAV*PVGLVSIPLPI
Trigger: AATTGGCAAAGGGATAGAGACGAGCCCCACGGGCCAGACAGCCAACCTCCGCTCCGCACCCCACAGCCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR GCA 72 bp CCTGGGGCAGCCCCGCAGCAAGTAGGACCTTGGCGCTaGTGCAGTCTCGTTTGCCAAGACGCAAAGGAGTGT +
Preference number: 3 (lower is better)
Translates to: PGAAPQQVGPWR*CSLVCQDAKEC
Trigger: ACACTCCTTTGCGTCTTGGCAAACGAGACTGCAGCAGCGCCAAGGTCCTACTTGCTGCGGGGCTGCCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR CCA 72 bp TGTGGGGTGCGGAGCGGAGGTTGGCTGTCTGGCCCGTaGGGCTCGTCTCTATCCCTTTGCCAATTTCCTCTC +
Preference number: 3 (lower is better)
Translates to: CGVRSGGWLSGP*GSSLSLCQFPL
Trigger: GAGAGGAAATTGGCAAAGGGATAGAGACGAGCCCCACGGGCCAGACAGCCAACCTCCGCTCCGCACCCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR GCA 72 bp GGGGCAGCCCCGCAGCAAGTAGGACCTTGGCGCTGCTaGAGTCTCGTTTGCCAAGACGCAAAGGAGTGTTTG +
Preference number: 3 (lower is better)
Translates to: GAAPQQVGPWRC*SLVCQDAKECL
Trigger: CAAACACTCCTTTGCGTCTTGGCAAACGAGACTGCAGCAGCGCCAAGGTCCTACTTGCTGCGGGGCTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR-3UTR CAA 90 bp GCGCTGCTGCAGTCTCGTTTGCCAAGACGCAAAGGAGTGTTTGTGCCGACGGCTTTGTCTGTGCATCATTaGGCTAAGCCCCGCTCCCCG +
Preference number: 3 (lower is better)
Translates to: ALLQSRLPRRKGVFVPTALSVHH*AKPRSP
Trigger: CGGGGAGCGGGGCTTAGCCAAATGATGCACAGACAA...AGCCGTCGGCACAAACACTCCTTTGCGTCTTGGCAAACGAGACTGCAGCAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR-3UTR CAA 90 bp GGTGGCTTTCCTTTGCCGTTTCTCCTGTGGGCGGACCAGGATGGTCAGTTCTTTGACGCAAAGGAGTGTTaGTGCCGACGGCTGCCCTCT +
Preference number: 3 (lower is better)
Translates to: GGFPLPFLLWADQDGQFFDAKEC*CRRLPS
Trigger: AGAGGGCAGCCGTCGGCACAAACACTCCTTTGCGTC...AAAGAACTGACCATCCTGGTCCGCCCACAGGAGAAACGGCAAAGGAAAGCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR GCA 72 bp TGCAGTCTCGTTTGCCAAGACGCAAAGGAGTGTTTGTaGCGACGGCTGCCCTCTCCGCAGAAGTCGCTGGAA +
Preference number: 3 (lower is better)
Translates to: CSLVCQDAKECL*RRLPSPQKSLE
Trigger: TTCCAGCGACTTCTGCGGAGAGGGCAGCCGTCGGCACAAACACTCCTTTGCGTCTTGGCAAACGAGACTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR GCA 72 bp CAGCAAGTAGGACCTTGGCGCTGCTGCAGTCTCGTTTaGCAAGACGCAAAGGAGTGTTTGTGCCGACGGCTG +
Preference number: 3 (lower is better)
Translates to: QQVGPWRCCSLV*QDAKECLCRRL
Trigger: CAGCCGTCGGCACAAACACTCCTTTGCGTCTTGGCAAACGAGACTGCAGCAGCGCCAAGGTCCTACTTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR-3UTR CAA 90 bp ATTGGAGGTGGCTTTCCTTTGCCGTTTCTCCTGTGGGCGGACCAGGATGGTCAGCTGCTGCAGTCTCGTTaGCCAAGACGCAAAGGAGTG +
Preference number: 3 (lower is better)
Translates to: IGGGFPLPFLLWADQDGQLLQSR*PRRKGV
Trigger: CACTCCTTTGCGTCTTGGCAAACGAGACTGCAGCAG...CTGACCATCCTGGTCCGCCCACAGGAGAAACGGCAAAGGAAAGCCACCTCCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR GCA 72 bp TGGCTGTCTGGCCCGTGGGGCTCGTCTCTATCCCTTTaGCAATTTCCTCTCTCCACCCGATTTCGAAGCATC +
Preference number: 3 (lower is better)
Translates to: WLSGPWGSSLSL*QFPLSTRFRSI
Trigger: GATGCTTCGAAATCGGGTGGAGAGAGGAAATTGGCAAAGGGATAGAGACGAGCCCCACGGGCCAGACAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR GCA 72 bp TTTGCCAAGACGCAAAGGAGTGTTTGTGCCGACGGCTaGCCTCTCCGCAGAAGTCGCTGGAATAAACGGGCA +
Preference number: 3 (lower is better)
Translates to: FAKTQRSVCADG*PLRRSRWNKRA
Trigger: TGCCCGTTTATTCCAGCGACTTCTGCGGAGAGGGCAGCCGTCGGCACAAACACTCCTTTGCGTCTTGGCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR-3UTR CAA 90 bp TTGTCTTCGCTTCTGGGCGCCCCCACACTACTCAGCGTGGGAAGAGTAAGGAGACTCGTCTCTATCCCTTaGCCAATTTCCTCTCTCCAC +
Preference number: 3 (lower is better)
Translates to: LSSLLGAPTLLSVGRVRRLVSIP*PISSLH
Trigger: GTGGAGAGAGGAAATTGGCAAAGGGATAGAGACGAG...TCTCCTTACTCTTCCCACGCTGAGTAGTGTGGGGGCGCCCAGAAGCGAAGACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR GCA 72 bp GCAGAAGTCGCTGGAATAAACGGGCACAATTGTCTGTaGATCATTTGGCTAAGCCCCGCTCCCCGTGCCAAT +
Preference number: 3 (lower is better)
Translates to: AEVAGINGHNCL*IIWLSPAPRAN
Trigger: ATTGGCACGGGGAGCGGGGCTTAGCCAAATGATGCACAGACAATTGTGCCCGTTTATTCCAGCGACTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR CCA 72 bp GTTTGTGCCGACGGCTGCCCTCTCCGCAGAAGTCGCTaGAATAAACGGGCACAATTGTCTGTGCATCATTTG +
Preference number: 3 (lower is better)
Translates to: VCADGCPLRRSR*NKRAQLSVHHL
Trigger: CAAATGATGCACAGACAATTGTGCCCGTTTATTCCAGCGACTTCTGCGGAGAGGGCAGCCGTCGGCACAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR GCA 72 bp ATTGTCATAATGACTCCATTGGAGGTGGCTTTCCTTTaGCGTTTCTCCTGTGGGCGGACCAGGATGGTCAGT +
Preference number: 3 (lower is better)
Translates to: IVIMTPLEVAFL*RFSCGRTRMVS
Trigger: ACTGACCATCCTGGTCCGCCCACAGGAGAAACGGCAAAGGAAAGCCACCTCCAATGGAGTCATTATGACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR CCA 72 bp TCCATTGGAGGTGGCTTTCCTTTGCCGTTTCTCCTGTaGGCGGACCAGGATGGTCAGTTCTTTTTCTTAACT +
Preference number: 3 (lower is better)
Translates to: SIGGGFPLPFLL*ADQDGQFFFLT
Trigger: AGTTAAGAAAAAGAACTGACCATCCTGGTCCGCCCACAGGAGAAACGGCAAAGGAAAGCCACCTCCAATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR GCA 90 bp CCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGCCCTTCTCTGCCCCGCCGCTaGCCGGGGGATGTCCTGGCG +
Preference number: 4 (lower is better)
Translates to: PFTSLPPGEGHLAPTARPSLPRR*PGDVLA
Trigger: CGCCAGGACATCCCCCGGGCAGCGGCGGGGCAGAGA...AGGGCGCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR TCA 90 bp TCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGCCCTGGGCGCCACAGCAGGCTCTTaGGCGCCTTGCGGAACTCGC +
Preference number: 4 (lower is better)
Translates to: SPLYRPGKATLPRRRALGATAGS*APCGTR
Trigger: GCGAGTTCCGCAAGGCGCTCAAGAGCCTGCTGTGGC...GCCCAGGGCGCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CCA 90 bp TCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGCCCGTGCGGAGCGGAGGTTaGCTGTCTGGCCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: SFHLFTARGRPPCPDGAPVRSGG*LSGPWG
Trigger: GCCCCACGGGCCAGACAGCCAACCTCCGCTCCGCAC...GGGCGCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR CAA 72 bp ATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTaGCCCCGACGGCGCGCCCTGGGCCTGAGGCCTGCG +
Preference number: 4 (lower is better)
Translates to: ILSPLYRPGKAT*PRRRALGLRPA
Trigger: CGCAGGCCTCAGGCCCAGGGCGCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR TCA 90 bp ATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGCCCGCGGCGGTCGGCGATaGAGCGCACCAGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: ILSPLYRPGKATLPRRRARGGRR*SAPAAG
Trigger: ACCTGCTGCTGGTGCGCTTCATCGCCGACCGCCGCG...GGCGCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CCA 90 bp TCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGCCCTGGGCTGGAGAAAATGGCACTaGGCAGCGAGGCCAGCGCGG +
Preference number: 4 (lower is better)
Translates to: SPLYRPGKATLPRRRALGWRKWH*AARPAR
Trigger: CCGCGCTGGCCTCGCTGCCCAGTGCCATTTTCTCCA...GCCCAGGGCGCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CCA 90 bp TCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGCCCTGGGCCAGGTGGTGAGCGCCTaGTTGGGCAGCCAACACAGG +
Preference number: 4 (lower is better)
Translates to: SPLYRPGKATLPRRRALGQVVSA*LGSQHR
Trigger: CCTGTGTTGGCTGCCCAACCAGGCGCTCACCACCTG...GCCCAGGGCGCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR GCA 90 bp TTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCTCTCTGCCCCGCCGCTaGCCGGGGGATGTCCTGGCG +
Preference number: 4 (lower is better)
Translates to: FILSPLYRPGKATLPRRRSLPRR*PGDVLA
Trigger: CGCCAGGACATCCCCCGGGCAGCGGCGGGGCAGAGA...GCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR TCA 90 bp CTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGCCCTGAGGGGCGCATGCTGGTaGTCGAAGGAGACGCGATGC +
Preference number: 4 (lower is better)
Translates to: LSPLYRPGKATLPRRRALRGACW*SKETRC
Trigger: GCATCGCGTCTCCTTCGATCACCAGCATGCGCCCCT...CAGGGCGCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR GCA 90 bp CATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGCGTTGCCAGGCTAGCCTaGGGGACGTGCGTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: HPFTSLPPGEGHLAPTARVARLA*GTCVGA
Trigger: AGCTCCCACGCACGTCCCGCAGGCTAGCCTGGCAAC...GCGCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR GCA 90 bp TTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGCCCTGGGTTTGTGCCGACGGCTaGCCTCTCCGCAGAAGTCGC +
Preference number: 4 (lower is better)
Translates to: FHLFTARGRPPCPDGAPWVCADG*PLRRSR
Trigger: GCGACTTCTGCGGAGAGGGCAGCCGTCGGCACAAAC...CCAGGGCGCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR TCA 90 bp ATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGCCCCTGGACGCAGGAGTTaGGCTCAGCGGCTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: ILSPLYRPGKATLPRRRAPGRRS*AQRLLW
Trigger: CCAAAGCAGCCGCTGAGCTCAACTCCTGCGTCCAGG...GGCGCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR TCA 90 bp CAGCCCTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCGGGGCCTGCAGCCCCTaGTCCTCGTGCTCCGGCTTG +
Preference number: 4 (lower is better)
Translates to: QPSFILSPLYRPGKATLPGACSP*SSCSGL
Trigger: CAAGCCGGAGCACGAGGATCAGGGGCTGCAGGCCCC...GGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAGGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CCA 90 bp CCCAGCCCTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCACAGTCTCCGGGCGCTaGCTCCGGTCGGGCGTCCTC +
Preference number: 4 (lower is better)
Translates to: PSPPSSFHLFTARGRPPCTVSGR*LRSGVL
Trigger: GAGGACGCCCGACCGGAGCCAGCGCCCGGAGACTGT...GCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAGGGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CCA 90 bp TTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGCCCTGGTGGCTGTCTGGCCCGTaGGGCTCGTCTCTATCCCTT +
Preference number: 4 (lower is better)
Translates to: FHLFTARGRPPCPDGAPWWLSGP*GSSLSL
Trigger: AAGGGATAGAGACGAGCCCCACGGGCCAGACAGCCA...CCAGGGCGCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR TCA 90 bp CAGCCCTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCGGATGCTCCAGGTGGTaGGCGCCTGGTTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: QPSFILSPLYRPGKATLPGCSRW*APGWAA
Trigger: GGCTGCCCAACCAGGCGCTCACCACCTGGAGCATCC...GGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAGGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR GCA 90 bp ATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGCCGGTGGCTATCGTGGCTaGATCGGCCATCTGCATGCG +
Preference number: 4 (lower is better)
Translates to: ILSPLYRPGKATLPRRRAGGYRG*IGHLHA
Trigger: CGCATGCAGATGGCCGATGCAGCCACGATAGCCACC...GGCGCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CCA 90 bp CCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGCCCTACACACACAGCGCCTTaGCCGAGAAGCAGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: PFTSLPPGEGHLAPTARPTHTAP*PRSSSC
Trigger: ACAGCTGCTGCTTCTCGGCCAAGGCGCTGTGTGTGT...AGGGCGCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR TCA 90 bp TCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGCCCGGTCCGGGACCAGACTaGAGAGTTCTGCTAGCTTGT +
Preference number: 4 (lower is better)
Translates to: SFHLFTARGRPPCPDGAPGPGPD*RVLLAC
Trigger: ACAAGCTAGCAGAACTCTTCAGTCTGGTCCCGGACC...GGGCGCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR TCA 90 bp CCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGCCCTTCACACTCATGGCAGTaGGGAAGAACACGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: PFTSLPPGEGHLAPTARPSHSWQ*GRTRWR
Trigger: ACGCCAGCGTGTTCTTCCTCACTGCCATGAGTGTGA...AGGGCGCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR TCA 90 bp GCGCTGCTGCAGTCTCGTTTGCCAAGACGCAAAGGAGTGTTTGTGCCGACGGCTCGCGGCGGTCGGCGATaGAGCGCACCAGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: ALLQSRLPRRKGVFVPTARGGRR*SAPAAG
Trigger: ACCTGCTGCTGGTGCGCTTCATCGCCGACCGCCGCG...AGCCGTCGGCACAAACACTCCTTTGCGTCTTGGCAAACGAGACTGCAGCAGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR GCA 90 bp TTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGCCCTGGCATCGGCCATCTGCATaGGCAGGTACCTCTAGGTCA +
Preference number: 4 (lower is better)
Translates to: FHLFTARGRPPCPDGAPWHRPSA*AGTSRS
Trigger: TGACCTAGAGGTACCTGCGCATGCAGATGGCCGATG...CCAGGGCGCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR GCA 90 bp CCTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACAGGCCCAGCCAGAACTaGCTGTCGCGGCCCAGCAAC +
Preference number: 4 (lower is better)
Translates to: PPSSFHLFTARGRPPCPDRPSQN*LSRPSN
Trigger: GTTGCTGGGCCGCGACAGGCAGTTCTGGCTGGGCCT...GTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR GCA 90 bp CATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGCAGGCAGCTGTTGGAGTaGGCTAGGCACACGCTCACA +
Preference number: 4 (lower is better)
Translates to: HPFTSLPPGEGHLAPTARRQLLE*ARHTLT
Trigger: TGTGAGCGTGTGCCTAGCGCACTCCAACAGCTGCCT...GCGCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR GCA 90 bp TCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGGTCAGTAGGCAGAGCTaGTGGGCAGCAGGTCGTAGC +
Preference number: 4 (lower is better)
Translates to: SSFHLFTARGRPPCPDGAVSRQS*WAAGRS
Trigger: GCTACGACCTGCTGCCCAGCAGCTCTGCCTACTGAC...CGCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR GCA 90 bp TGGGGTGCGGAGCGGAGGTTGGCTGTCTGGCCCGTGGGGCTCGTCTCTATCCCTGAGGTGGCTTTCCTTTaGCGTTTCTCCTGTGGGCGG +
Preference number: 4 (lower is better)
Translates to: WGAERRLAVWPVGLVSIPEVAFL*RFSCGR
Trigger: CCGCCCACAGGAGAAACGGCAAAGGAAAGCCACCTC...AGGGATAGAGACGAGCCCCACGGGCCAGACAGCCAACCTCCGCTCCGCACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR CCA 90 bp CTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGGCGCAGCGAACGCCCTaGACGCAGGAGTTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: LHPFTSLPPGEGHLAPTAAQRTP*TQELSS
Trigger: TGAGCTCAACTCCTGCGTCCAGGGCGTTCGCTGCGC...CGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CCA 90 bp CCCCAGCCCTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGGTACTAAGCGCGTCCTaGCGCGCAGCGAACGCCCTG +
Preference number: 4 (lower is better)
Translates to: PQPSFILSPLYRPGKATLVLSAS*RAANAL
Trigger: CAGGGCGTTCGCTGCGCGCCAGGACGCGCTTAGTAC...CAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAGGGCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CCA 90 bp TCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGCCCTGGGCTGGCGTACATGTTCATaGACGTCACCATGGACACGA +
Preference number: 4 (lower is better)
Translates to: SPLYRPGKATLPRRRALGWRTCS*TSPWTR
Trigger: TCGTGTCCATGGTGACGTCCATGAACATGTACGCCA...GCCCAGGGCGCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CCA 90 bp CTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGTGTCCTCGGGTCCGGTaGCTCTTCAGAGCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: LLHPFTSLPPGEGHLAPTCPRVR*LFRAEA
Trigger: GGCCTCGGCTCTGAAGAGCCACCGGACCCGAGGACA...CGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CCA 90 bp AGCCCTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCCGGAGGTTGGCTGTCTaGCCCGTGGGGCTCGTCTCT +
Preference number: 4 (lower is better)
Translates to: SPPSSFHLFTARGRPPCPRRLAV*PVGLVS
Trigger: AGAGACGAGCCCCACGGGCCAGACAGCCAACCTCCG...GGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR TCA 90 bp TCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCCTGGACGCAGGAGTTaGGCTCAGCGGCTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: SFILSPLYRPGKATLPRRPGRRS*AQRLLW
Trigger: CCAAAGCAGCCGCTGAGCTCAACTCCTGCGTCCAGG...CCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR TCA 90 bp TCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGCCCTGCCGAAGGGCCATTTaGAGTCAAGAGCGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: SFHLFTARGRPPCPDGAPCRRAI*SQERSP
Trigger: TGGAGAACGCTCTTGACTTCAAATGGCCCTTCGGCA...GGGCGCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR TCA 90 bp ACGCAAAGGAGTGTTTGTGCCGACGGCTGCCCTCTCCGCAGAAGTCGCTGGAATCCCCCTGCTAACGTCTaGGCTCCGGGGCTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: TQRSVCADGCPLRRSRWNPPANV*APGLCS
Trigger: GCTGCACAGCCCCGGAGCTCAGACGTTAGCAGGGGG...ATTCCAGCGACTTCTGCGGAGAGGGCAGCCGTCGGCACAAACACTCCTTTGCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR GCA 90 bp CCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGCCCTTGCGCCAGCCCTGCATaGTCTTCATCAGGTAGAGAA +
Preference number: 4 (lower is better)
Translates to: PFTSLPPGEGHLAPTARPCASPA*SSSGRE
Trigger: TTCTCTACCTGATGAAGAGCATGCAGGGCTGGCGCA...AGGGCGCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CCA 90 bp TCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGAGAGAGCCCAGGAACTaGGTACTAAGCGCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SSFHLFTARGRPPCPDGAREPRN*VLSASW
Trigger: CCAGGACGCGCTTAGTACCCAGTTCCTGGGCTCTCT...CGCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CCA 90 bp ATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGCCTCATGGTGGCTATCGTaGCTGCATCGGCCATCTGCA +
Preference number: 4 (lower is better)
Translates to: ILSPLYRPGKATLPRRRASWWLS*LHRPSA
Trigger: TGCAGATGGCCGATGCAGCCACGATAGCCACCATGA...GGCGCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CCA 90 bp TTGGAGGTGGCTTTCCTTTGCCGTTTCTCCTGTGGGCGGACCAGGATGGTCAGTACAGTCTCCGGGCGCTaGCTCCGGTCGGGCGTCCTC +
Preference number: 4 (lower is better)
Translates to: LEVAFLCRFSCGRTRMVSTVSGR*LRSGVL
Trigger: GAGGACGCCCGACCGGAGCCAGCGCCCGGAGACTGT...ACTGACCATCCTGGTCCGCCCACAGGAGAAACGGCAAAGGAAAGCCACCTCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR CCA 90 bp CTACCAGCTCTAGATTCCTGGGGCAGCCCCGCAGCAAGTAGGACCTTGGCGCTGGACCACGACGCCAGGTaGGTAGTAGAGCAGGTCCGG +
Preference number: 4 (lower is better)
Translates to: LPALDSWGSPAASRTLALDHDAR*VVEQVR
Trigger: CCGGACCTGCTCTACTACCCACCTGGCGTCGTGGTC...CAGCGCCAAGGTCCTACTTGCTGCGGGGCTGCCCCAGGAATCTAGAGCTGGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR CCA 90 bp CCCTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGAGACCACGACGCCAGGTaGGTAGTAGAGCAGGTCCGG +
Preference number: 4 (lower is better)
Translates to: PSFILSPLYRPGKATLPRDHDAR*VVEQVR
Trigger: CCGGACCTGCTCTACTACCCACCTGGCGTCGTGGTC...TCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR TCA 90 bp CCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCCCTCGCCCATCACCTTaGCCGTGGTGGAGAAAATGG +
Preference number: 4 (lower is better)
Translates to: PSSFHLFTARGRPPCPDGPRPSP*PWWRKW
Trigger: CCATTTTCTCCACCACGGTCAAGGTGATGGGCGAGG...GCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR TCA 90 bp GTTTGTGCCGACGGCTGCCCTCTCCGCAGAAGTCGCTGGAATAAACGGGCACAAGCCACAGCAGGCTCTTaGGCGCCTTGCGGAACTCGC +
Preference number: 4 (lower is better)
Translates to: VCADGCPLRRSRWNKRAQATAGS*APCGTR
Trigger: GCGAGTTCCGCAAGGCGCTCAAGAGCCTGCTGTGGC...TTGTGCCCGTTTATTCCAGCGACTTCTGCGGAGAGGGCAGCCGTCGGCACAAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR GCA 90 bp GGAGGTTGGCTGTCTGGCCCGTGGGGCTCGTCTCTATCCCTTTGCCAATTTCCTGTTGCCAGGCTAGCCTaGGGGACGTGCGTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: GGWLSGPWGSSLSLCQFPVARLA*GTCVGA
Trigger: AGCTCCCACGCACGTCCCGCAGGCTAGCCTGGCAAC...AGGAAATTGGCAAAGGGATAGAGACGAGCCCCACGGGCCAGACAGCCAACCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR GCA 90 bp CCCCCAGCCCTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCAAAGGAGTGTTTGTaGCGACGGCTGCCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: PPALLHPFTSLPPGEGHLAKECL*RRLPSP
Trigger: CGGAGAGGGCAGCCGTCGGCACAAACACTCCTTTGC...AAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAGGGCTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR CCA 90 bp TTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGCTCAGCGGCTGCTTTaGAGCAGAGTTGAGGAGTGC +
Preference number: 4 (lower is better)
Translates to: FILSPLYRPGKATLPRRRAQRLL*SRVEEC
Trigger: GCACTCCTCAACTCTGCTCCAAAGCAGCCGCTGAGC...GCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CCA 90 bp CCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGCCCTCTGCTGCCTTATTCATaGTGGCTATCGTGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: PFTSLPPGEGHLAPTARPLLPYS*WLSWLH
Trigger: ATGCAGCCACGATAGCCACCATGAATAAGGCAGCAG...AGGGCGCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CCA 90 bp CTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGCGTTACCACTCGTGTTaGCCGCCTCCAGAAGGTCCG +
Preference number: 4 (lower is better)
Translates to: LLHPFTSLPPGEGHLAPTRYHSC*PPPEGP
Trigger: CGGACCTTCTGGAGGCGGCCAACACGAGTGGTAACG...CGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CCA 90 bp CCCCAGCCCTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCGTTACCACTCGTGTTaGCCGCCTCCAGAAGGTCCG +
Preference number: 4 (lower is better)
Translates to: PQPSFILSPLYRPGKATLRYHSC*PPPEGP
Trigger: CGGACCTTCTGGAGGCGGCCAACACGAGTGGTAACG...CAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAGGGCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CCA 90 bp CTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGACACACACAGCGCCTTaGCCGAGAAGCAGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: LHPFTSLPPGEGHLAPTATHTAP*PRSSSC
Trigger: ACAGCTGCTGCTTCTCGGCCAAGGCGCTGTGTGTGT...CGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CCA 90 bp CCCTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACCGTGGTGGAGAAAATaGCACTGGGCAGCGAGGCCA +
Preference number: 4 (lower is better)
Translates to: PSFILSPLYRPGKATLPRPWWRK*HWAARP
Trigger: TGGCCTCGCTGCCCAGTGCCATTTTCTCCACCACGG...TCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CCA 90 bp CCTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACAGTAAGGAGAGGCTGTaGGGTGCGGAGCGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: PPSSFHLFTARGRPPCPDSKERL*GAERRL
Trigger: CAACCTCCGCTCCGCACCCCACAGCCTCTCCTTACT...GTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR TCA 90 bp CTAGATTCCTGGGGCAGCCCCGCAGCAAGTAGGACCTTGGCGCTGCTGCAGTCTGCTTTGGAGCAGAGTTaGGGAGTGCAGCCCGTAAGG +
Preference number: 4 (lower is better)
Translates to: LDSWGSPAASRTLALLQSALEQS*GVQPVR
Trigger: CCTTACGGGCTGCACTCCTCAACTCTGCTCCAAAGC...AGACTGCAGCAGCGCCAAGGTCCTACTTGCTGCGGGGCTGCCCCAGGAATCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR TCA 90 bp AGCCCTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGCTTTGGAGCAGAGTTaGGGAGTGCAGCCCGTAAGG +
Preference number: 4 (lower is better)
Translates to: SPPSSFHLFTARGRPPCPALEQS*GVQPVR
Trigger: CCTTACGGGCTGCACTCCTCAACTCTGCTCCAAAGC...GGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR TCA 90 bp CCTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACAGGGTGAGCACAAACTaGAAGTCCGTCAGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: PPSSFHLFTARGRPPCPDRVSTN*KSVSAR
Trigger: CCTGGCGCTGACGGACTTTCAGTTTGTGCTCACCCT...GTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR TCA 90 bp CCCCAGCCCTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGAGGGTGAGCACAAACTaGAAGTCCGTCAGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: PQPSFILSPLYRPGKATLRVSTN*KSVSAR
Trigger: CCTGGCGCTGACGGACTTTCAGTTTGTGCTCACCCT...CAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAGGGCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR TCA 90 bp CCTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACCCCAGAAGGGCAGGGTaGGCACAAACTGAAAGTCCG +
Preference number: 4 (lower is better)
Translates to: PPSSFHLFTARGRPPCPDPRRAG*AQTESP
Trigger: CGGACTTTCAGTTTGTGCTCACCCTGCCCTTCTGGG...GTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR TCA 90 bp TCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCCCAGAAGGGCAGGGTaGGCACAAACTGAAAGTCCG +
Preference number: 4 (lower is better)
Translates to: SFILSPLYRPGKATLPRRPRRAG*AQTESP
Trigger: CGGACTTTCAGTTTGTGCTCACCCTGCCCTTCTGGG...CCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR TCA 90 bp CCTGGGGCAGCCCCGCAGCAAGTAGGACCTTGGCGCTGCTGCAGTCTCGTTTGCTGCCGAAGGGCCATTTaGAGTCAAGAGCGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: PGAAPQQVGPWRCCSLVCCRRAI*SQERSP
Trigger: TGGAGAACGCTCTTGACTTCAAATGGCCCTTCGGCA...GCAAACGAGACTGCAGCAGCGCCAAGGTCCTACTTGCTGCGGGGCTGCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR TCA 90 bp GCCCTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGTCACACTCATGGCAGTaGGGAAGAACACGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: ALLHPFTSLPPGEGHLAPSHSWQ*GRTRWR
Trigger: ACGCCAGCGTGTTCTTCCTCACTGCCATGAGTGTGA...CGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR TCA 90 bp AGCCCTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCCCTCGCCCATCACCTTaGCCGTGGTGGAGAAAATGG +
Preference number: 4 (lower is better)
Translates to: SPPSSFHLFTARGRPPCPPRPSP*PWWRKW
Trigger: CCATTTTCTCCACCACGGTCAAGGTGATGGGCGAGG...GGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAGGGCT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR GCA 90 bp CCCTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACACAAGTCCGGAAGCTaGAGCGACGCGTTACCACTC +
Preference number: 4 (lower is better)
Translates to: PSFILSPLYRPGKATLPRHKSGS*SDALPL
Trigger: GAGTGGTAACGCGTCGCTGCAGCTTCCGGACTTGTG...TCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR GCA 90 bp AGCCCTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCCACAAGTCCGGAAGCTaGAGCGACGCGTTACCACTC +
Preference number: 4 (lower is better)
Translates to: SPPSSFHLFTARGRPPCPHKSGS*SDALPL
Trigger: GAGTGGTAACGCGTCGCTGCAGCTTCCGGACTTGTG...GGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR GCA 90 bp ATTGGAGGTGGCTTTCCTTTGCCGTTTCTCCTGTGGGCGGACCAGGATGGTCAGAGGCCCAGCCAGAACTaGCTGTCGCGGCCCAGCAAC +
Preference number: 4 (lower is better)
Translates to: IGGGFPLPFLLWADQDGQRPSQN*LSRPSN
Trigger: GTTGCTGGGCCGCGACAGGCAGTTCTGGCTGGGCCT...CTGACCATCCTGGTCCGCCCACAGGAGAAACGGCAAAGGAAAGCCACCTCCAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR GCA 90 bp CAGCCCTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCAGGCAGCTGTTGGAGTaGGCTAGGCACACGCTCACA +
Preference number: 4 (lower is better)
Translates to: QPSFILSPLYRPGKATLPRQLLE*ARHTLT
Trigger: TGTGAGCGTGTGCCTAGCGCACTCCAACAGCTGCCT...GGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR GCA 90 bp TGTGGGGTGCGGAGCGGAGGTTGGCTGTCTGGCCCGTGGGGCTCGTCTCTATCCGGGCACAATTGTCTGTaGATCATTTGGCTAAGCCCC +
Preference number: 4 (lower is better)
Translates to: CGVRSGGWLSGPWGSSLSGHNCL*IIWLSP
Trigger: GGGGCTTAGCCAAATGATGCACAGACAATTGTGCCC...GGATAGAGACGAGCCCCACGGGCCAGACAGCCAACCTCCGCTCCGCACCCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR GCA 90 bp TCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGGGACCTTGGCGCTGCTaGAGTCTCGTTTGCCAAGAC +
Preference number: 4 (lower is better)
Translates to: SFILSPLYRPGKATLPRRGPWRC*SLVCQD
Trigger: GTCTTGGCAAACGAGACTGCAGCAGCGCCAAGGTCC...CCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR CCA 90 bp CCAGCCCTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCAGAGAGCCCAGGAACTaGGTACTAAGCGCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PALLHPFTSLPPGEGHLAREPRN*VLSASW
Trigger: CCAGGACGCGCTTAGTACCCAGTTCCTGGGCTCTCT...GGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAGGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CCA 90 bp CTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGCCTGCGGGACGTGCGTaGGAGCTTTCAAAGCAGCTA +
Preference number: 4 (lower is better)
Translates to: LLHPFTSLPPGEGHLAPTPAGRA*ELSKQL
Trigger: TAGCTGCTTTGAAAGCTCCCACGCACGTCCCGCAGG...CGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CCA 90 bp ACGGCTGCCCTCTCCGCAGAAGTCGCTGGAATAAACGGGCACAATTGTCTGTGCTGTCCTCGGGTCCGGTaGCTCTTCAGAGCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: TAALSAEVAGINGHNCLCCPRVR*LFRAEA
Trigger: GGCCTCGGCTCTGAAGAGCCACCGGACCCGAGGACA...GCACAGACAATTGTGCCCGTTTATTCCAGCGACTTCTGCGGAGAGGGCAGCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR CCA 90 bp TTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCCACAGGAAATACTCCTaGCTGAAGGGCACCGCGTTG +
Preference number: 4 (lower is better)
Translates to: FILSPLYRPGKATLPRRRHRKYS*LKGTAL
Trigger: CAACGCGGTGCCCTTCAGCCAGGAGTATTTCCTGTG...GCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CCA 90 bp GCCCTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGCACAGGAAATACTCCTaGCTGAAGGGCACCGCGTTG +
Preference number: 4 (lower is better)
Translates to: ALLHPFTSLPPGEGHLAPHRKYS*LKGTAL
Trigger: CAACGCGGTGCCCTTCAGCCAGGAGTATTTCCTGTG...CGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR TCA 90 bp CTACCAGCTCTAGATTCCTGGGGCAGCCCCGCAGCAAGTAGGACCTTGGCGCTGTGGTCACTGATTTGGTaGCCTTCGACAGTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: LPALDSWGSPAASRTLALWSLIW*PSTVSG
Trigger: CCCGGAGACTGTCGAAGGTCACCAAATCAGTGACCA...CAGCGCCAAGGTCCTACTTGCTGCGGGGCTGCCCCAGGAATCTAGAGCTGGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR TCA 90 bp CCCCAGCCCTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGTGGTCACTGATTTGGTaGCCTTCGACAGTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: PQPSFILSPLYRPGKATLWSLIW*PSTVSG
Trigger: CCCGGAGACTGTCGAAGGTCACCAAATCAGTGACCA...CAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAGGGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR GCA 90 bp TCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGGTTGAGCTCAGCGGCTaGTTTGGAGCAGAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: SFILSPLYRPGKATLPRRVELSG*FGAELR
Trigger: CCTCAACTCTGCTCCAAAGCAGCCGCTGAGCTCAAC...CCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR GCA 90 bp CCCCAGCCCTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGGTTGAGCTCAGCGGCTaGTTTGGAGCAGAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: PQPSFILSPLYRPGKATLVELSG*FGAELR
Trigger: CCTCAACTCTGCTCCAAAGCAGCCGCTGAGCTCAAC...CAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAGGGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR GCA 90 bp GCGCTGCTGCAGTCTCGTTTGCCAAGACGCAAAGGAGTGTTTGTGCCGACGGCTGGTGGCTATCGTGGCTaGATCGGCCATCTGCATGCG +
Preference number: 4 (lower is better)
Translates to: ALLQSRLPRRKGVFVPTAGGYRG*IGHLHA
Trigger: CGCATGCAGATGGCCGATGCAGCCACGATAGCCACC...AGCCGTCGGCACAAACACTCCTTTGCGTCTTGGCAAACGAGACTGCAGCAGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR GCA 90 bp GCGCTGCTGCAGTCTCGTTTGCCAAGACGCAAAGGAGTGTTTGTGCCGACGGCTGTCAGTAGGCAGAGCTaGTGGGCAGCAGGTCGTAGC +
Preference number: 4 (lower is better)
Translates to: ALLQSRLPRRKGVFVPTAVSRQS*WAAGRS
Trigger: GCTACGACCTGCTGCCCAGCAGCTCTGCCTACTGAC...AGCCGTCGGCACAAACACTCCTTTGCGTCTTGGCAAACGAGACTGCAGCAGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR GCA 90 bp CTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGTAGGACCTTGGCGCTaGTGCAGTCTCGTTTGCCAA +
Preference number: 4 (lower is better)
Translates to: LLHPFTSLPPGEGHLAPTVGPWR*CSLVCQ
Trigger: TTGGCAAACGAGACTGCAGCAGCGCCAAGGTCCTAC...CGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR GCA 90 bp CCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGCCCTTCCAAAAGCGTTTCTTaGCTACCAGCTCTAGATTCC +
Preference number: 4 (lower is better)
Translates to: PFTSLPPGEGHLAPTARPSKSVS*LPALDS
Trigger: GGAATCTAGAGCTGGTAGGCAAGAAACGCTTTTGGA...AGGGCGCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR CCA 90 bp ACTCCATTGGAGGTGGCTTTCCTTTGCCGTTTCTCCTGTGGGCGGACCAGGATGGCGCAGCGAACGCCCTaGACGCAGGAGTTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: TPLEVAFLCRFSCGRTRMAQRTP*TQELSS
Trigger: TGAGCTCAACTCCTGCGTCCAGGGCGTTCGCTGCGC...CATCCTGGTCCGCCCACAGGAGAAACGGCAAAGGAAAGCCACCTCCAATGGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR CCA 90 bp GGACCTTGGCGCTGCTGCAGTCTCGTTTGCCAAGACGCAAAGGAGTGTTTGTGCCAGGTGGTGAGCGCCTaGTTGGGCAGCCAACACAGG +
Preference number: 4 (lower is better)
Translates to: GPWRCCSLVCQDAKECLCQVVSA*LGSQHR
Trigger: CCTGTGTTGGCTGCCCAACCAGGCGCTCACCACCTG...GCACAAACACTCCTTTGCGTCTTGGCAAACGAGACTGCAGCAGCGCCAAGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR CCA 90 bp TTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGGGAACGCGTATACCTaGCACAGGAAATACTCCTGG +
Preference number: 4 (lower is better)
Translates to: FILSPLYRPGKATLPRRRGNAYT*HRKYSW
Trigger: CCAGGAGTATTTCCTGTGCCAGGTATACGCGTTCCC...GCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CCA 90 bp CCCCAGCCCTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCAGCAAGTAGGACCTTaGCGCTGCTGCAGTCTCGTT +
Preference number: 4 (lower is better)
Translates to: PQPSFILSPLYRPGKATLQQVGP*RCCSLV
Trigger: AACGAGACTGCAGCAGCGCCAAGGTCCTACTTGCTG...CAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAGGGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR CCA 90 bp ACGCAAAGGAGTGTTTGTGCCGACGGCTGCCCTCTCCGCAGAAGTCGCTGGAATCCAGCTCTAGATTCCTaGGGCAGCCCCGCAGCAAGT +
Preference number: 4 (lower is better)
Translates to: TQRSVCADGCPLRRSRWNPALDS*GSPAAS
Trigger: ACTTGCTGCGGGGCTGCCCCAGGAATCTAGAGCTGG...ATTCCAGCGACTTCTGCGGAGAGGGCAGCCGTCGGCACAAACACTCCTTTGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR CCA 90 bp GAGCGGAGGTTGGCTGTCTGGCCCGTGGGGCTCGTCTCTATCCCTTTGCCAATTTTGCCGTTTCTCCTGTaGGCGGACCAGGATGGTCAG +
Preference number: 4 (lower is better)
Translates to: ERRLAVWPVGLVSIPLPILPFLL*ADQDGQ
Trigger: CTGACCATCCTGGTCCGCCCACAGGAGAAACGGCAA...AATTGGCAAAGGGATAGAGACGAGCCCCACGGGCCAGACAGCCAACCTCCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR CAA 72 bp TGCTGCAGTCTCGTTTGCCAAGACGCAAAGGAGTGTTaGTGCCGACGGCTGCCCTCTCCGCAGAAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: CCSLVCQDAKEC*CRRLPSPQKSL
Trigger: CAGCGACTTCTGCGGAGAGGGCAGCCGTCGGCACAAACACTCCTTTGCGTCTTGGCAAACGAGACTGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR CAA 72 bp CTAGATTCCTGGGGCAGCCCCGCAGCAAGTAGGACCTaGGCGCTGCTGCAGTCTCGTTTGCCAAGACGCAAA +
Preference number: 4 (lower is better)
Translates to: LDSWGSPAASRT*ALLQSRLPRRK
Trigger: TTTGCGTCTTGGCAAACGAGACTGCAGCAGCGCCAAGGTCCTACTTGCTGCGGGGCTGCCCCAGGAATCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR TCA 90 bp TTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGACAACGATGGTCACTaGTTTGGTGACCTTCGACAG +
Preference number: 4 (lower is better)
Translates to: FILSPLYRPGKATLPRRRDNDGH*FGDLRQ
Trigger: CTGTCGAAGGTCACCAAATCAGTGACCATCGTTGTC...GCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR TCA 90 bp ATCCCTTTGCCAATTTCCTCTCTCCACCCGATTTCGAAGCATCTCCTCTCCAGAGGGGCCTGCAGCCCCTaGTCCTCGTGCTCCGGCTTG +
Preference number: 4 (lower is better)
Translates to: IPLPISSLHPISKHLLSRGACSP*SSCSGL
Trigger: CAAGCCGGAGCACGAGGATCAGGGGCTGCAGGCCCC...TCTGGAGAGGAGATGCTTCGAAATCGGGTGGAGAGAGGAAATTGGCAAAGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR GCA 90 bp CCTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACTGCGCCAGCCCTGCATaGTCTTCATCAGGTAGAGAA +
Preference number: 4 (lower is better)
Translates to: PPSSFHLFTARGRPPCPDCASPA*SSSGRE
Trigger: TTCTCTACCTGATGAAGAGCATGCAGGGCTGGCGCA...GTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CCA 90 bp TCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCTGCCTTATTCATGGTaGCTATCGTGGCTGCATCGG +
Preference number: 4 (lower is better)
Translates to: SFILSPLYRPGKATLPRRLPYSW*LSWLHR
Trigger: CCGATGCAGCCACGATAGCCACCATGAATAAGGCAG...CCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CCA 90 bp CCCCCAGCCCTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGGGAACGCGTATACCTaGCACAGGAAATACTCCTGG +
Preference number: 4 (lower is better)
Translates to: PPALLHPFTSLPPGEGHLGNAYT*HRKYSW
Trigger: CCAGGAGTATTTCCTGTGCCAGGTATACGCGTTCCC...AAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAGGGCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR CCA 90 bp TTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCCTCCGCAGAAGTCGCTaGAATAAACGGGCACAATTG +
Preference number: 4 (lower is better)
Translates to: FILSPLYRPGKATLPRRRLRRSR*NKRAQL
Trigger: CAATTGTGCCCGTTTATTCCAGCGACTTCTGCGGAG...GCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR TCA 90 bp ACGCAAAGGAGTGTTTGTGCCGACGGCTGCCCTCTCCGCAGAAGTCGCTGGAATGGTCCGGGACCAGACTaGAGAGTTCTGCTAGCTTGT +
Preference number: 4 (lower is better)
Translates to: TQRSVCADGCPLRRSRWNGPGPD*RVLLAC
Trigger: ACAAGCTAGCAGAACTCTTCAGTCTGGTCCCGGACC...ATTCCAGCGACTTCTGCGGAGAGGGCAGCCGTCGGCACAAACACTCCTTTGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR TCA 90 bp CCAGCCCTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCGACAACGATGGTCACTaGTTTGGTGACCTTCGACAG +
Preference number: 4 (lower is better)
Translates to: PALLHPFTSLPPGEGHLADNDGH*FGDLRQ
Trigger: CTGTCGAAGGTCACCAAATCAGTGACCATCGTTGTC...GGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAGGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR TCA 90 bp TTGCCAATTTCCTCTCTCCACCCGATTTCGAAGCATCTCCTCTCCAGAGAAGGTGGATGCTCCAGGTGGTaGGCGCCTGGTTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: LPISSLHPISKHLLSREGGCSRW*APGWAA
Trigger: GGCTGCCCAACCAGGCGCTCACCACCTGGAGCATCC...ACCTTCTCTGGAGAGGAGATGCTTCGAAATCGGGTGGAGAGAGGAAATTGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR GCA 90 bp GCCCTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGTCGTCTCTATCCCTTTaGCAATTTCCTCTCTCCACC +
Preference number: 4 (lower is better)
Translates to: ALLHPFTSLPPGEGHLAPSSLSL*QFPLST
Trigger: GGTGGAGAGAGGAAATTGGCAAAGGGATAGAGACGA...CGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR GCA 90 bp CTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGAAGCCCCGCTCCCCGTaGCAATTTCTCTACATTTTT +
Preference number: 4 (lower is better)
Translates to: LHPFTSLPPGEGHLAPTAKPRSP*QFLYIF
Trigger: AAAAATGTAGAGAAATTGGCACGGGGAGCGGGGCTT...CGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR CCA 90 bp ATTGGAGGTGGCTTTCCTTTGCCGTTTCTCCTGTGGGCGGACCAGGATGGTCAGGCTCAGCGGCTGCTTTaGAGCAGAGTTGAGGAGTGC +
Preference number: 4 (lower is better)
Translates to: IGGGFPLPFLLWADQDGQAQRLL*SRVEEC
Trigger: GCACTCCTCAACTCTGCTCCAAAGCAGCCGCTGAGC...CTGACCATCCTGGTCCGCCCACAGGAGAAACGGCAAAGGAAAGCCACCTCCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR CCA 90 bp CCCAGCCCTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCACACGATCTTACACATaGCCTTGCCGAAGGGCCATT +
Preference number: 4 (lower is better)
Translates to: PSPPSSFHLFTARGRPPCTRSYT*PCRRAI
Trigger: AATGGCCCTTCGGCAAGGCCATGTGTAAGATCGTGT...GCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAGGGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CCA 90 bp CATTGGAGGTGGCTTTCCTTTGCCGTTTCTCCTGTGGGCGGACCAGGATGGTCAGCTTGTCTTCGCTTCTaGGCGCCCCCACACTACTCA +
Preference number: 4 (lower is better)
Translates to: HWRWLSFAVSPVGGPGWSACLRF*APPHYS
Trigger: TGAGTAGTGTGGGGGCGCCCAGAAGCGAAGACAAGC...TGACCATCCTGGTCCGCCCACAGGAGAAACGGCAAAGGAAAGCCACCTCCAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR CAA 72 bp GCAGCAAGTAGGACCTTGGCGCTGCTGCAGTCTCGTTaGCCAAGACGCAAAGGAGTGTTTGTGCCGACGGCT +
Preference number: 4 (lower is better)
Translates to: AASRTLALLQSR*PRRKGVFVPTA
Trigger: AGCCGTCGGCACAAACACTCCTTTGCGTCTTGGCAAACGAGACTGCAGCAGCGCCAAGGTCCTACTTGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR TCA 90 bp TCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGTTTCAAAGCAGCTACTaGAGAGAGAGCCCAGGAACT +
Preference number: 4 (lower is better)
Translates to: SFILSPLYRPGKATLPRRFQSSY*RESPGT
Trigger: AGTTCCTGGGCTCTCTCTTCAGTAGCTGCTTTGAAA...CCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR GCA 90 bp ACTCCATTGGAGGTGGCTTTCCTTTGCCGTTTCTCCTGTGGGCGGACCAGGATGCATCGGCCATCTGCATaGGCAGGTACCTCTAGGTCA +
Preference number: 4 (lower is better)
Translates to: TPLEVAFLCRFSCGRTRMHRPSA*AGTSRS
Trigger: TGACCTAGAGGTACCTGCGCATGCAGATGGCCGATG...CATCCTGGTCCGCCCACAGGAGAAACGGCAAAGGAAAGCCACCTCCAATGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR CCA 90 bp TCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGTCATGGACGTCACCATaGACACGATCTTACACATGG +
Preference number: 4 (lower is better)
Translates to: SFILSPLYRPGKATLPRRSWTSP*TRSYTW
Trigger: CCATGTGTAAGATCGTGTCCATGGTGACGTCCATGA...CCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CCA 90 bp ACTCCATTGGAGGTGGCTTTCCTTTGCCGTTTCTCCTGTGGGCGGACCAGGATGTGTCTGTGCATCATTTaGCTAAGCCCCGCTCCCCGT +
Preference number: 4 (lower is better)
Translates to: TPLEVAFLCRFSCGRTRMCLCII*LSPAPR
Trigger: ACGGGGAGCGGGGCTTAGCCAAATGATGCACAGACA...CATCCTGGTCCGCCCACAGGAGAAACGGCAAAGGAAAGCCACCTCCAATGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR CCA 90 bp ATTGGAGGTGGCTTTCCTTTGCCGTTTCTCCTGTGGGCGGACCAGGATGGTCAGACACTCCCCAGAGAATaGCTCTCCCAAGCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: IGGGFPLPFLLWADQDGQTLPRE*LSQAGD
Trigger: GTCACCAGCTTGGGAGAGCCATTCTCTGGGGAGTGT...CTGACCATCCTGGTCCGCCCACAGGAGAAACGGCAAAGGAAAGCCACCTCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR CAA 72 bp CCTCTCCGCAGAAGTCGCTGGAATAAACGGGCACAATaGTCTGTGCATCATTTGGCTAAGCCCCGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: PLRRSRWNKRAQ*SVHHLAKPRSP
Trigger: CGGGGAGCGGGGCTTAGCCAAATGATGCACAGACAATTGTGCCCGTTTATTCCAGCGACTTCTGCGGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR TCA 90 bp TTGCCAATTTCCTCTCTCCACCCGATTTCGAAGCATCTCCTCTCCAGAGAAGGTAGGGGCGCATGCTGGTaGTCGAAGGAGACGCGATGC +
Preference number: 4 (lower is better)
Translates to: LPISSLHPISKHLLSREGRGACW*SKETRC
Trigger: GCATCGCGTCTCCTTCGATCACCAGCATGCGCCCCT...ACCTTCTCTGGAGAGGAGATGCTTCGAAATCGGGTGGAGAGAGGAAATTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR CCA 90 bp TTTGCCAATTTCCTCTCTCCACCCGATTTCGAAGCATCTCCTCTCCAGAGAAGGTGGAGAAAATGGCACTaGGCAGCGAGGCCAGCGCGG +
Preference number: 4 (lower is better)
Translates to: FANFLSPPDFEASPLQRRWRKWH*AARPAR
Trigger: CCGCGCTGGCCTCGCTGCCCAGTGCCATTTTCTCCA...CCTTCTCTGGAGAGGAGATGCTTCGAAATCGGGTGGAGAGAGGAAATTGGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR CAA 72 bp TTGGCTGTCTGGCCCGTGGGGCTCGTCTCTATCCCTTaGCCAATTTCCTCTCTCCACCCGATTTCGAAGCAT +
Preference number: 4 (lower is better)
Translates to: LAVWPVGLVSIP*PISSLHPISKH
Trigger: ATGCTTCGAAATCGGGTGGAGAGAGGAAATTGGCAAAGGGATAGAGACGAGCCCCACGGGCCAGACAGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR TCA 90 bp TTGCCAATTTCCTCTCTCCACCCGATTTCGAAGCATCTCCTCTCCAGAGAAGGTGCTCTCCCAAGCTGGTaGCAGGTGTTATCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: LPISSLHPISKHLLSREGALPSW*QVLSPC
Trigger: GCAGGGGGATAACACCTGTCACCAGCTTGGGAGAGC...ACCTTCTCTGGAGAGGAGATGCTTCGAAATCGGGTGGAGAGAGGAAATTGGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR CCA 90 bp ATTGGAGGTGGCTTTCCTTTGCCGTTTCTCCTGTGGGCGGACCAGGATGGTCAGCTGCTGCCTTATTCATaGTGGCTATCGTGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: IGGGFPLPFLLWADQDGQLLPYS*WLSWLH
Trigger: ATGCAGCCACGATAGCCACCATGAATAAGGCAGCAG...CTGACCATCCTGGTCCGCCCACAGGAGAAACGGCAAAGGAAAGCCACCTCCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR CCA 90 bp ATTGGAGGTGGCTTTCCTTTGCCGTTTCTCCTGTGGGCGGACCAGGATGGTCAGACACGATCTTACACATaGCCTTGCCGAAGGGCCATT +
Preference number: 4 (lower is better)
Translates to: IGGGFPLPFLLWADQDGQTRSYT*PCRRAI
Trigger: AATGGCCCTTCGGCAAGGCCATGTGTAAGATCGTGT...CTGACCATCCTGGTCCGCCCACAGGAGAAACGGCAAAGGAAAGCCACCTCCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR CCA 90 bp GGAGGTTGGCTGTCTGGCCCGTGGGGCTCGTCTCTATCCCTTTGCCAATTTCCTTCATGGACGTCACCATaGACACGATCTTACACATGG +
Preference number: 4 (lower is better)
Translates to: GGWLSGPWGSSLSLCQFPSWTSP*TRSYTW
Trigger: CCATGTGTAAGATCGTGTCCATGGTGACGTCCATGA...AGGAAATTGGCAAAGGGATAGAGACGAGCCCCACGGGCCAGACAGCCAACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR CCA 90 bp TCCATTGGAGGTGGCTTTCCTTTGCCGTTTCTCCTGTGGGCGGACCAGGATGGTTGGCGTACATGTTCATaGACGTCACCATGGACACGA +
Preference number: 4 (lower is better)
Translates to: SIGGGFPLPFLLWADQDGWRTCS*TSPWTR
Trigger: TCGTGTCCATGGTGACGTCCATGAACATGTACGCCA...ACCATCCTGGTCCGCCCACAGGAGAAACGGCAAAGGAAAGCCACCTCCAATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR CCA 90 bp TTTGCCAATTTCCTCTCTCCACCCGATTTCGAAGCATCTCCTCTCCAGAGAAGGCCGTGGTGGAGAAAATaGCACTGGGCAGCGAGGCCA +
Preference number: 4 (lower is better)
Translates to: FANFLSPPDFEASPLQRRPWWRK*HWAARP
Trigger: TGGCCTCGCTGCCCAGTGCCATTTTCTCCACCACGG...CCTTCTCTGGAGAGGAGATGCTTCGAAATCGGGTGGAGAGAGGAAATTGGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR GCA 90 bp GGTGGCTTTCCTTTGCCGTTTCTCCTGTGGGCGGACCAGGATGGTCAGTTCTTTTGCTGCAGTCTCGTTTaGCAAGACGCAAAGGAGTGT +
Preference number: 4 (lower is better)
Translates to: GGFPLPFLLWADQDGQFFCCSLV*QDAKEC
Trigger: ACACTCCTTTGCGTCTTGGCAAACGAGACTGCAGCA...AAAGAACTGACCATCCTGGTCCGCCCACAGGAGAAACGGCAAAGGAAAGCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR GCA 90 bp TTTGCCAATTTCCTCTCTCCACCCGATTTCGAAGCATCTCCTCTCCAGAGAAGGTTACCCCAGTTTTGTTaGCAGGCTAGCCTGCGGGAC +
Preference number: 4 (lower is better)
Translates to: FANFLSPPDFEASPLQRRLPQFC*QASLRD
Trigger: GTCCCGCAGGCTAGCCTGGCAACAAAACTGGGGTAA...CCTTCTCTGGAGAGGAGATGCTTCGAAATCGGGTGGAGAGAGGAAATTGGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR CAA 72 bp AATTGTCATAATGACTCCATTGGAGGTGGCTTTCCTTaGCCGTTTCTCCTGTGGGCGGACCAGGATGGTCAG +
Preference number: 4 (lower is better)
Translates to: NCHNDSIGGGFP*PFLLWADQDGQ
Trigger: CTGACCATCCTGGTCCGCCCACAGGAGAAACGGCAAAGGAAAGCCACCTCCAATGGAGTCATTATGACAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR GCA 90 bp GTGCCGACGGCTGCCCTCTCCGCAGAAGTCGCTGGAATAAACGGGCACAATTGTATTTCTCTACATTTTTaGTGCTTGTCTTCGCTTCTG +
Preference number: 4 (lower is better)
Translates to: VPTAALSAEVAGINGHNCISLHF*CLSSLL
Trigger: CAGAAGCGAAGACAAGCAGCAAAAATGTAGAGAAAT...ACAATTGTGCCCGTTTATTCCAGCGACTTCTGCGGAGAGGGCAGCCGTCGGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330120.5
3UTR CAA 72 bp GCCCAGTCCGGAATGATAATTGTCATAATGACTCCATaGGAGGTGGCTTTCCTTTGCCGTTTCTCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: AQSGMIIVIMTP*EVAFLCRFSCG
Trigger: CCCACAGGAGAAACGGCAAAGGAAAGCCACCTCCAATGGAGTCATTATGACAATTATCATTCCGGACTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR GCA 90 bp TTTGCCAATTTCCTCTCTCCACCCGATTTCGAAGCATCTCCTCTCCAGAGAAGGTCTCTACATTTTTGCTaGTTGTCTTCGCTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: FANFLSPPDFEASPLQRRSLHFC*LSSLLG
Trigger: GCCCAGAAGCGAAGACAAGCAGCAAAAATGTAGAGA...CCTTCTCTGGAGAGGAGATGCTTCGAAATCGGGTGGAGAGAGGAAATTGGCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS GCA 90 bp GAATCCGCACCCGGGCCTCTGTGTCCGCGCTCTCTGCCCCGCCGCTaGCCGGGGGATGTCCTGGCGGCGCGCCGTCCGGCAACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: ESAPGPLCPRSLPRR*PGDVLAARRPATPA
Trigger: GGCTGGAGTTGCCGGACGGCGCGCCGCCAGGACATCCCCCGGGCAGCGGCGGGGCAGAGAGCGCGGACACAGAGGCCCGGGTGCGGATTC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS GCA 90 bp CACGCTGATGAGAATCCGCACCCGGGCCTCTGTGTCCGCGCTCTCTaGCCCGCCGCTGCCCGGGGGATGTCCTGGCGGCGCGCCGTCCGG +
Preference number: 5 (lower is better)
Translates to: HADENPHPGLCVRAL*PAAARGMSWRRAVR
Trigger: CCGGACGGCGCGCCGCCAGGACATCCCCCGGGCAGCGGCGGGGCAGAGAGCGCGGACACAGAGGCCCGGGTGCGGATTCTCATCAGCGTG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CAA 90 bp TCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGCCCTGGGCTCGCGGCCCAGCAACTaGTCCGGGAAACGCACCAGG +
Preference number: 5 (lower is better)
Translates to: SPLYRPGKATLPRRRALGSRPSN*SGKRTR
Trigger: CCTGGTGCGTTTCCCGGACAAGTTGCTGGGCCGCGA...GCCCAGGGCGCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CAA 90 bp CTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGCCCTGAGGCTCTTGAGCGCCTaGCGGAACTCGCGGCGCACG +
Preference number: 5 (lower is better)
Translates to: LSPLYRPGKATLPRRRALRLLSA*RNSRRT
Trigger: CGTGCGCCGCGAGTTCCGCAAGGCGCTCAAGAGCCT...CAGGGCGCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CAA 90 bp TCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGCCCGGGTTGAGGCAGCTGTaGGAGTGCGCTAGGCACACG +
Preference number: 5 (lower is better)
Translates to: SFHLFTARGRPPCPDGAPGLRQL*ECARHT
Trigger: CGTGTGCCTAGCGCACTCCAACAGCTGCCTCAACCC...GGGCGCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CAA 90 bp CATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGCCGCCACAGCAGGCTCTaGAGCGCCTTGCGGAACTCG +
Preference number: 5 (lower is better)
Translates to: HPFTSLPPGEGHLAPTARRHSRL*SALRNS
Trigger: CGAGTTCCGCAAGGCGCTCAAGAGCCTGCTGTGGCG...GCGCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS GCA 90 bp CCGTCCGGCAACTCCAGCCCCAGCTCCCACCACAAGTCCGGAAGCTaGAGCGACGCGTTACCACTCGTGTTGGCCGCCTCCAGAAGGTCC +
Preference number: 5 (lower is better)
Translates to: PSGNSSPSSHHKSGS*SDALPLVLAASRRS
Trigger: GGACCTTCTGGAGGCGGCCAACACGAGTGGTAACGCGTCGCTGCAGCTTCCGGACTTGTGGTGGGAGCTGGGGCTGGAGTTGCCGGACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CAA 90 bp TCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGCCCTGGGCTCCTCGCCCATCACCTaGACCGTGGTGGAGAAAATG +
Preference number: 5 (lower is better)
Translates to: SPLYRPGKATLPRRRALGSSPIT*TVVEKM
Trigger: CATTTTCTCCACCACGGTCAAGGTGATGGGCGAGGA...GCCCAGGGCGCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CAA 90 bp TTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCAGGCTCTTGAGCGCCTaGCGGAACTCGCGGCGCACG +
Preference number: 5 (lower is better)
Translates to: FILSPLYRPGKATLPRRRRLLSA*RNSRRT
Trigger: CGTGCGCCGCGAGTTCCGCAAGGCGCTCAAGAGCCT...GCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CAA 90 bp TTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGCCCTGGGACGCAAAGGAGTGTTaGTGCCGACGGCTGCCCTCT +
Preference number: 5 (lower is better)
Translates to: FHLFTARGRPPCPDGAPWDAKEC*CRRLPS
Trigger: AGAGGGCAGCCGTCGGCACAAACACTCCTTTGCGTC...CCAGGGCGCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS TCA 90 bp ACTAAGCGCGTCCTGGCGCGCAGCGAACGCCCTGGACGCAGGAGTTaGGCTCAGCGGCTGCTTTGGAGCAGAGTTGAGGAGTGCAGCCCG +
Preference number: 5 (lower is better)
Translates to: TKRVLARSERPGRRS*AQRLLWSRVEECSP
Trigger: CGGGCTGCACTCCTCAACTCTGCTCCAAAGCAGCCGCTGAGCTCAACTCCTGCGTCCAGGGCGTTCGCTGCGCGCCAGGACGCGCTTAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CAA 90 bp GCGCTGCTGCAGTCTCGTTTGCCAAGACGCAAAGGAGTGTTTGTGCCGACGGCTGGTGCGGAGCGGAGGTaGGCTGTCTGGCCCGTGGGG +
Preference number: 5 (lower is better)
Translates to: ALLQSRLPRRKGVFVPTAGAERR*AVWPVG
Trigger: CCCCACGGGCCAGACAGCCAACCTCCGCTCCGCACC...AGCCGTCGGCACAAACACTCCTTTGCGTCTTGGCAAACGAGACTGCAGCAGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR CAA 90 bp TGGGGTGCGGAGCGGAGGTTGGCTGTCTGGCCCGTGGGGCTCGTCTCTATCCCTGGAGGTGGCTTTCCTTaGCCGTTTCTCCTGTGGGCG +
Preference number: 5 (lower is better)
Translates to: WGAERRLAVWPVGLVSIPGGGFP*PFLLWA
Trigger: CGCCCACAGGAGAAACGGCAAAGGAAAGCCACCTCC...AGGGATAGAGACGAGCCCCACGGGCCAGACAGCCAACCTCCGCTCCGCACCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS TCA 90 bp ACTTGTCCGGGAAACGCACCAGGCACAGCTCCTCGCCCATCACCTTaGCCGTGGTGGAGAAAATGGCACTGGGCAGCGAGGCCAGCGCGG +
Preference number: 5 (lower is better)
Translates to: TCPGNAPGTAPRPSP*PWWRKWHWAARPAR
Trigger: CCGCGCTGGCCTCGCTGCCCAGTGCCATTTTCTCCACCACGGTCAAGGTGATGGGCGAGGAGCTGTGCCTGGTGCGTTTCCCGGACAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS CCA 90 bp CAGCTACTGAAGAGAGAGCCCAGGAACTGGGTACTAAGCGCGTCCTaGCGCGCAGCGAACGCCCTGGACGCAGGAGTTGAGCTCAGCGGC +
Preference number: 5 (lower is better)
Translates to: QLLKREPRNWVLSAS*RAANALDAGVELSG
Trigger: GCCGCTGAGCTCAACTCCTGCGTCCAGGGCGTTCGCTGCGCGCCAGGACGCGCTTAGTACCCAGTTCCTGGGCTCTCTCTTCAGTAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CAA 90 bp TTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGCCCTGGGTTGCCGAAGGGCCATTaGAAGTCAAGAGCGTTCTCC +
Preference number: 5 (lower is better)
Translates to: FTSLPPGEGHLAPTARPGLPKGH*KSRAFS
Trigger: GGAGAACGCTCTTGACTTCAAATGGCCCTTCGGCAA...CCCAGGGCGCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CAA 90 bp CCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGGGTTGAGGCAGCTGTaGGAGTGCGCTAGGCACACG +
Preference number: 5 (lower is better)
Translates to: PSSFHLFTARGRPPCPDGGLRQL*ECARHT
Trigger: CGTGTGCCTAGCGCACTCCAACAGCTGCCTCAACCC...GCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CAA 90 bp AGCCCTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCCGCCACAGCAGGCTCTaGAGCGCCTTGCGGAACTCG +
Preference number: 5 (lower is better)
Translates to: SPPSSFHLFTARGRPPCPRHSRL*SALRNS
Trigger: CGAGTTCCGCAAGGCGCTCAAGAGCCTGCTGTGGCG...GGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CAA 90 bp AGCCCTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCTCCTCGTGCTCCGGCTaGGTAGTGGCGGTGAAGGGG +
Preference number: 5 (lower is better)
Translates to: SPPSSFHLFTARGRPPCPSSCSG*VVAVKG
Trigger: CCCCTTCACCGCCACTACCAAGCCGGAGCACGAGGA...GGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS GCA 90 bp TGGCGCGCAGCGAACGCCCTGGACGCAGGAGTTGAGCTCAGCGGCTaGTTTGGAGCAGAGTTGAGGAGTGCAGCCCGTAAGGCAAGCACT +
Preference number: 5 (lower is better)
Translates to: WRAANALDAGVELSG*FGAELRSAARKAST
Trigger: AGTGCTTGCCTTACGGGCTGCACTCCTCAACTCTGCTCCAAAGCAGCCGCTGAGCTCAACTCCTGCGTCCAGGGCGTTCGCTGCGCGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CAA 90 bp CATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGCAAGAGTTCTGCTAGCTaGTCCCCGCCTGCTGCCTTA +
Preference number: 5 (lower is better)
Translates to: HPFTSLPPGEGHLAPTARKSSAS*SPPAAL
Trigger: TAAGGCAGCAGGCGGGGACAAGCTAGCAGAACTCTT...GCGCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CAA 90 bp TCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGCCCTTGCCGAAGGGCCATTaGAAGTCAAGAGCGTTCTCC +
Preference number: 5 (lower is better)
Translates to: SFHLFTARGRPPCPDGAPLPKGH*KSRAFS
Trigger: GGAGAACGCTCTTGACTTCAAATGGCCCTTCGGCAA...GGGCGCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CAA 90 bp GAGCGGAGGTTGGCTGTCTGGCCCGTGGGGCTCGTCTCTATCCCTTTGCCAATTTCGCGGCCCAGCAACTaGTCCGGGAAACGCACCAGG +
Preference number: 5 (lower is better)
Translates to: ERRLAVWPVGLVSIPLPISRPSN*SGKRTR
Trigger: CCTGGTGCGTTTCCCGGACAAGTTGCTGGGCCGCGA...AATTGGCAAAGGGATAGAGACGAGCCCCACGGGCCAGACAGCCAACCTCCGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR CAA 90 bp CTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGTGGTGAGCGCCTGGTaGGGCAGCCAACACAGGAAG +
Preference number: 5 (lower is better)
Translates to: LLHPFTSLPPGEGHLAPTVVSAW*GSQHRK
Trigger: CTTCCTGTGTTGGCTGCCCAACCAGGCGCTCACCAC...CGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CAA 90 bp CCTGGGGCAGCCCCGCAGCAAGTAGGACCTTGGCGCTGCTGCAGTCTCGTTTGCGGCACCGCGTTGAACTaGATGAGGATGCTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: PGAAPQQVGPWRCCSLVCGTALN*MRMLQV
Trigger: CACCTGGAGCATCCTCATCAAGTTCAACGCGGTGCC...GCAAACGAGACTGCAGCAGCGCCAAGGTCCTACTTGCTGCGGGGCTGCCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR CAA 90 bp ATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGCCCTGAAGGGCACCGCGTaGAACTTGATGAGGATGCTC +
Preference number: 5 (lower is better)
Translates to: ILSPLYRPGKATLPRRRALKGTA*NLMRML
Trigger: GAGCATCCTCATCAAGTTCAACGCGGTGCCCTTCAG...GGCGCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS TCA 90 bp CCCTGGACGCAGGAGTTGAGCTCAGCGGCTGCTTTGGAGCAGAGTTaGGGAGTGCAGCCCGTAAGGCAAGCACTCGGCGTCCAAGGGTTC +
Preference number: 5 (lower is better)
Translates to: PWTQELSSAAALEQS*GVQPVRQALGVQGF
Trigger: GAACCCTTGGACGCCGAGTGCTTGCCTTACGGGCTGCACTCCTCAACTCTGCTCCAAAGCAGCCGCTGAGCTCAACTCCTGCGTCCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS CCA 90 bp GCGTGGGAGCTTTCAAAGCAGCTACTGAAGAGAGAGCCCAGGAACTaGGTACTAAGCGCGTCCTGGCGCGCAGCGAACGCCCTGGACGCA +
Preference number: 5 (lower is better)
Translates to: AWELSKQLLKREPRN*VLSASWRAANALDA
Trigger: TGCGTCCAGGGCGTTCGCTGCGCGCCAGGACGCGCTTAGTACCCAGTTCCTGGGCTCTCTCTTCAGTAGCTGCTTTGAAAGCTCCCACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CAA 90 bp CATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGCTTGGTGACGAAGAGGTaGATAGAGGACTTGCGCCAG +
Preference number: 5 (lower is better)
Translates to: HPFTSLPPGEGHLAPTARLVTKR*IEDLRQ
Trigger: CTGGCGCAAGTCCTCTATCAACCTCTTCGTCACCAA...GCGCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CAA 90 bp CCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGGCACCGCGTTGAACTaGATGAGGATGCTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: PSSFHLFTARGRPPCPDGGTALN*MRMLQV
Trigger: CACCTGGAGCATCCTCATCAAGTTCAACGCGGTGCC...GCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CAA 90 bp GTTTGTGCCGACGGCTGCCCTCTCCGCAGAAGTCGCTGGAATAAACGGGCACAATCCTCGTGCTCCGGCTaGGTAGTGGCGGTGAAGGGG +
Preference number: 5 (lower is better)
Translates to: VCADGCPLRRSRWNKRAQSSCSG*VVAVKG
Trigger: CCCCTTCACCGCCACTACCAAGCCGGAGCACGAGGA...TTGTGCCCGTTTATTCCAGCGACTTCTGCGGAGAGGGCAGCCGTCGGCACAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS TCA 90 bp GCCAACACAGGAAGAAGGACAGGACAACGATGGTCACTGATTTGGTaGCCTTCGACAGTCTCCGGGCGCTGGCTCCGGTCGGGCGTCCTC +
Preference number: 5 (lower is better)
Translates to: ANTGRRTGQRWSLIW*PSTVSGRWLRSGVL
Trigger: GAGGACGCCCGACCGGAGCCAGCGCCCGGAGACTGTCGAAGGTCACCAAATCAGTGACCATCGTTGTCCTGTCCTTCTTCCTGTGTTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CAA 90 bp TTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCTGCTTTGGAGCAGAGTaGAGGAGTGCAGCCCGTAAG +
Preference number: 5 (lower is better)
Translates to: FILSPLYRPGKATLPRRRCFGAE*RSAARK
Trigger: CTTACGGGCTGCACTCCTCAACTCTGCTCCAAAGCA...GCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CAA 90 bp GCCCTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGAAGAGTTCTGCTAGCTaGTCCCCGCCTGCTGCCTTA +
Preference number: 5 (lower is better)
Translates to: ALLHPFTSLPPGEGHLAPKSSAS*SPPAAL
Trigger: TAAGGCAGCAGGCGGGGACAAGCTAGCAGAACTCTT...CGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CAA 90 bp AGCCCTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCAGGTTGATAGAGGACTaGCGCCAGCCCTGCATGCTC +
Preference number: 5 (lower is better)
Translates to: SPPSSFHLFTARGRPPCPRLIED*RQPCML
Trigger: GAGCATGCAGGGCTGGCGCAAGTCCTCTATCAACCT...GGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CAA 90 bp TCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGTTGGTGACGAAGAGGTaGATAGAGGACTTGCGCCAG +
Preference number: 5 (lower is better)
Translates to: SSFHLFTARGRPPCPDGALVTKR*IEDLRQ
Trigger: CTGGCGCAAGTCCTCTATCAACCTCTTCGTCACCAA...CGCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CAA 90 bp ACGCAAAGGAGTGTTTGTGCCGACGGCTGCCCTCTCCGCAGAAGTCGCTGGAATGTGGTGAGCGCCTGGTaGGGCAGCCAACACAGGAAG +
Preference number: 5 (lower is better)
Translates to: TQRSVCADGCPLRRSRWNVVSAW*GSQHRK
Trigger: CTTCCTGTGTTGGCTGCCCAACCAGGCGCTCACCAC...ATTCCAGCGACTTCTGCGGAGAGGGCAGCCGTCGGCACAAACACTCCTTTGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR CAA 90 bp GGACCTTGGCGCTGCTGCAGTCTCGTTTGCCAAGACGCAAAGGAGTGTTTGTGCGCGTTACCACTCGTGTaGGCCGCCTCCAGAAGGTCC +
Preference number: 5 (lower is better)
Translates to: GPWRCCSLVCQDAKECLCALPLV*AASRRS
Trigger: GGACCTTCTGGAGGCGGCCAACACGAGTGGTAACGC...GCACAAACACTCCTTTGCGTCTTGGCAAACGAGACTGCAGCAGCGCCAAGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR CAA 90 bp AGCCCTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCTCCGTCAGCGCCAGGTaGGTGACGAAGAGGTTGATA +
Preference number: 5 (lower is better)
Translates to: SPPSSFHLFTARGRPPCPSVSAR*VTKRLI
Trigger: TATCAACCTCTTCGTCACCAACCTGGCGCTGACGGA...GGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CAA 90 bp CAGCCCTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCTCCGTCAGCGCCAGGTaGGTGACGAAGAGGTTGATA +
Preference number: 5 (lower is better)
Translates to: QPSFILSPLYRPGKATLPSVSAR*VTKRLI
Trigger: TATCAACCTCTTCGTCACCAACCTGGCGCTGACGGA...GGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CAA 90 bp CCCTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACTGAAGGGCACCGCGTaGAACTTGATGAGGATGCTC +
Preference number: 5 (lower is better)
Translates to: PSFILSPLYRPGKATLPRLKGTA*NLMRML
Trigger: GAGCATCCTCATCAAGTTCAACGCGGTGCCCTTCAG...TCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CAA 90 bp ATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGCCCTCCAAAAGCGTTTCTaGCCTACCAGCTCTAGATTC +
Preference number: 5 (lower is better)
Translates to: ILSPLYRPGKATLPRRRALQKRF*PTSSRF
Trigger: GAATCTAGAGCTGGTAGGCAAGAAACGCTTTTGGAG...GGCGCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR CAA 90 bp CCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCATCTTACACATGGCCTaGCCGAAGGGCCATTTGAAG +
Preference number: 5 (lower is better)
Translates to: PSSFHLFTARGRPPCPDGILHMA*PKGHLK
Trigger: CTTCAAATGGCCCTTCGGCAAGGCCATGTGTAAGAT...GCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CAA 90 bp CCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCACGATGGTCACTGATTaGGTGACCTTCGACAGTCTC +
Preference number: 5 (lower is better)
Translates to: PSSFHLFTARGRPPCPDGTMVTD*VTFDSL
Trigger: GAGACTGTCGAAGGTCACCAAATCAGTGACCATCGT...GCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CAA 90 bp TTGTCTTCGCTTCTGGGCGCCCCCACACTACTCAGCGTGGGAAGAGTAAGGAGAGCAGCAAGTAGGACCTaGGCGCTGCTGCAGTCTCGT +
Preference number: 5 (lower is better)
Translates to: LSSLLGAPTLLSVGRVRRAASRT*ALLQSR
Trigger: ACGAGACTGCAGCAGCGCCAAGGTCCTACTTGCTGC...TCTCCTTACTCTTCCCACGCTGAGTAGTGTGGGGGCGCCCAGAAGCGAAGACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS TCA 90 bp TCAGAGCCGAGGCCACCGAATGGTAGCGCGTCACACTCATGGCAGTaGGGAAGAACACGCTGGCGTACATGTTCATGGACGTCACCATGG +
Preference number: 5 (lower is better)
Translates to: SEPRPPNGSASHSWQ*GRTRWRTCSWTSPW
Trigger: CCATGGTGACGTCCATGAACATGTACGCCAGCGTGTTCTTCCTCACTGCCATGAGTGTGACGCGCTACCATTCGGTGGCCTCGGCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS CCA 90 bp CTGCTAGCTTGTCCCCGCCTGCTGCCTTATTCATGGTGGCTATCGTaGCTGCATCGGCCATCTGCATGCGCAGGTACCTCTAGGTCATGT +
Preference number: 5 (lower is better)
Translates to: LLACPRLLPYSWWLS*LHRPSACAGTSRSC
Trigger: ACATGACCTAGAGGTACCTGCGCATGCAGATGGCCGATGCAGCCACGATAGCCACCATGAATAAGGCAGCAGGCGGGGACAAGCTAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS CCA 90 bp CTGTTGGAGTGCGCTAGGCACACGCTCACAGGGAACGCGTATACCTaGCACAGGAAATACTCCTGGCTGAAGGGCACCGCGTTGAACTTG +
Preference number: 5 (lower is better)
Translates to: LLECARHTLTGNAYT*HRKYSWLKGTALNL
Trigger: CAAGTTCAACGCGGTGCCCTTCAGCCAGGAGTATTTCCTGTGCCAGGTATACGCGTTCCCTGTGAGCGTGTGCCTAGCGCACTCCAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CAA 90 bp TCGTTTGCCAAGACGCAAAGGAGTGTTTGTGCCGACGGCTGCCCTCTCCGCAGATGCTTTGGAGCAGAGTaGAGGAGTGCAGCCCGTAAG +
Preference number: 5 (lower is better)
Translates to: SFAKTQRSVCADGCPLRRCFGAE*RSAARK
Trigger: CTTACGGGCTGCACTCCTCAACTCTGCTCCAAAGCA...TCTGCGGAGAGGGCAGCCGTCGGCACAAACACTCCTTTGCGTCTTGGCAAACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR CAA 90 bp TTGTCTTCGCTTCTGGGCGCCCCCACACTACTCAGCGTGGGAAGAGTAAGGAGAAGGTTGATAGAGGACTaGCGCCAGCCCTGCATGCTC +
Preference number: 5 (lower is better)
Translates to: LSSLLGAPTLLSVGRVRRRLIED*RQPCML
Trigger: GAGCATGCAGGGCTGGCGCAAGTCCTCTATCAACCT...TCTCCTTACTCTTCCCACGCTGAGTAGTGTGGGGGCGCCCAGAAGCGAAGACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR CAA 90 bp CCCCAGCCCTCCTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGACGATGGTCACTGATTaGGTGACCTTCGACAGTCTC +
Preference number: 5 (lower is better)
Translates to: PQPSFILSPLYRPGKATLTMVTD*VTFDSL
Trigger: GAGACTGTCGAAGGTCACCAAATCAGTGACCATCGT...CAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAGGAGGGCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CAA 90 bp CTTCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGGTCATAATGACTCCATaGGAGGTGGCTTTCCTTTGC +
Preference number: 5 (lower is better)
Translates to: LHPFTSLPPGEGHLAPTAVIMTP*EVAFLC
Trigger: GCAAAGGAAAGCCACCTCCAATGGAGTCATTATGAC...CGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS CCA 90 bp CACACGCTCACAGGGAACGCGTATACCTGGCACAGGAAATACTCCTaGCTGAAGGGCACCGCGTTGAACTTGATGAGGATGCTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: HTLTGNAYTWHRKYS*LKGTALNLMRMLQV
Trigger: CACCTGGAGCATCCTCATCAAGTTCAACGCGGTGCCCTTCAGCCAGGAGTATTTCCTGTGCCAGGTATACGCGTTCCCTGTGAGCGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CAA 90 bp GAGCGGAGGTTGGCTGTCTGGCCCGTGGGGCTCGTCTCTATCCCTTTGCCAATTATCTTACACATGGCCTaGCCGAAGGGCCATTTGAAG +
Preference number: 5 (lower is better)
Translates to: ERRLAVWPVGLVSIPLPIILHMA*PKGHLK
Trigger: CTTCAAATGGCCCTTCGGCAAGGCCATGTGTAAGAT...AATTGGCAAAGGGATAGAGACGAGCCCCACGGGCCAGACAGCCAACCTCCGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR CAA 90 bp TCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGCCCAATTTCTCTACATTTTaGCTGCTTGTCTTCGCTTCT +
Preference number: 5 (lower is better)
Translates to: SFHLFTARGRPPCPDGAPNFSTF*LLVFAS
Trigger: AGAAGCGAAGACAAGCAGCAAAAATGTAGAGAAATT...GGGCGCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR CAA 90 bp TCATCCTTTCACCTCTTTACCGCCCGGGGAAGGCCACCTTGCCCCGACGGCGCGAATAAACGGGCACAATaGTCTGTGCATCATTTGGCT +
Preference number: 5 (lower is better)
Translates to: SSFHLFTARGRPPCPDGANKRAQ*SVHHLA
Trigger: AGCCAAATGATGCACAGACAATTGTGCCCGTTTATT...CGCGCCGTCGGGGCAAGGTGGCCTTCCCCGGGCGGTAAAGAGGTGAAAGGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS GCA 90 bp CTGCCTTATTCATGGTGGCTATCGTGGCTGCATCGGCCATCTGCATaGGCAGGTACCTCTAGGTCATGTTCTGGGGGACAAGACCTAAGA +
Preference number: 5 (lower is better)
Translates to: LPYSWWLSWLHRPSA*AGTSRSCSGGQDLR
Trigger: TCTTAGGTCTTGTCCCCCAGAACATGACCTAGAGGTACCTGCGCATGCAGATGGCCGATGCAGCCACGATAGCCACCATGAATAAGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS-3UTR CAA 90 bp CATTGGAGGTGGCTTTCCTTTGCCGTTTCTCCTGTGGGCGGACCAGGATGGTCACTCGTCTCTATCCCTTaGCCAATTTCCTCTCTCCAC +
Preference number: 5 (lower is better)
Translates to: HWRWLSFAVSPVGGPGWSLVSIP*PISSLH
Trigger: GTGGAGAGAGGAAATTGGCAAAGGGATAGAGACGAG...TGACCATCCTGGTCCGCCCACAGGAGAAACGGCAAAGGAAAGCCACCTCCAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR CAA 90 bp CAATTTCCTCTCTCCACCCGATTTCGAAGCATCTCCTCTCCAGAGAAGGTCCTCTTGTCTGTGCATCATTaGGCTAAGCCCCGCTCCCCG +
Preference number: 5 (lower is better)
Translates to: QFPLSTRFRSISSPEKVLLSVHH*AKPRSP
Trigger: CGGGGAGCGGGGCTTAGCCAAATGATGCACAGACAA...GAGGACCTTCTCTGGAGAGGAGATGCTTCGAAATCGGGTGGAGAGAGGAAATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS-3UTR CAA 90 bp CTCAGGGTGTTCCCGCTGGCCCAGTCCGGAATGATAATTGTCATAATGACTCCATCCTCGCCCATCACCTaGACCGTGGTGGAGAAAATG +
Preference number: 5 (lower is better)
Translates to: LRVFPLAQSGMIIVIMTPSSPIT*TVVEKM
Trigger: CATTTTCTCCACCACGGTCAAGGTGATGGGCGAGGA...TGGAGTCATTATGACAATTATCATTCCGGACTGGGCCAGCGGGAACACCCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330120.5
CDS CAA 72 bp CCGGTCGGGCGTCCTCCGGCTACCGCGGCCCCTCCTTaGGTCCCCGCCGCGCGGCGGTCGGCGATGAAGCGC +
Preference number: 6 (lower is better)
Translates to: PVGRPPATAAPP*VPAARRSAMKR
Trigger: GCGCTTCATCGCCGACCGCCGCGCGGCGGGGACCAAAGGAGGGGCCGCGGTAGCCGGAGGACGCCCGACCGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS CAA 90 bp GCGCTGGCTCCGGTCGGGCGTCCTCCGGCTACCGCGGCCCCTCCTTaGGTCCCCGCCGCGCGGCGGTCGGCGATGAAGCGCACCAGCAGC +
Preference number: 6 (lower is better)
Translates to: ALAPVGRPPATAAPP*VPAARRSAMKRTSS
Trigger: GCTGCTGGTGCGCTTCATCGCCGACCGCCGCGCGGCGGGGACCAAAGGAGGGGCCGCGGTAGCCGGAGGACGCCCGACCGGAGCCAGCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS GCA 72 bp GAGAATCCGCACCCGGGCCTCTGTGTCCGCGCTCTCTaGCCCGCCGCTGCCCGGGGGATGTCCTGGCGGCGC +
Preference number: 6 (lower is better)
Translates to: ENPHPGLCVRAL*PAAARGMSWRR
Trigger: GCGCCGCCAGGACATCCCCCGGGCAGCGGCGGGGCAGAGAGCGCGGACACAGAGGCCCGGGTGCGGATTCTC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS CAA 72 bp AGGCCCAGCCAGAACTGCCTGTCGCGGCCCAGCAACTaGTCCGGGAAACGCACCAGGCACAGCTCCTCGCCC +
Preference number: 6 (lower is better)
Translates to: RPSQNCLSRPSN*SGKRTRHSSSP
Trigger: GGGCGAGGAGCTGTGCCTGGTGCGTTTCCCGGACAAGTTGCTGGGCCGCGACAGGCAGTTCTGGCTGGGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS TCA 72 bp GTCCTGGCGCGCAGCGAACGCCCTGGACGCAGGAGTTaGGCTCAGCGGCTGCTTTGGAGCAGAGTTGAGGAG +
Preference number: 6 (lower is better)
Translates to: VLARSERPGRRS*AQRLLWSRVEE
Trigger: CTCCTCAACTCTGCTCCAAAGCAGCCGCTGAGCTCAACTCCTGCGTCCAGGGCGTTCGCTGCGCGCCAGGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS GCA 72 bp AACTCCAGCCCCAGCTCCCACCACAAGTCCGGAAGCTaGAGCGACGCGTTACCACTCGTGTTGGCCGCCTCC +
Preference number: 6 (lower is better)
Translates to: NSSPSSHHKSGS*SDALPLVLAAS
Trigger: GGAGGCGGCCAACACGAGTGGTAACGCGTCGCTGCAGCTTCCGGACTTGTGGTGGGAGCTGGGGCTGGAGTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS CCA 72 bp AAGAGAGAGCCCAGGAACTGGGTACTAAGCGCGTCCTaGCGCGCAGCGAACGCCCTGGACGCAGGAGTTGAG +
Preference number: 6 (lower is better)
Translates to: KREPRNWVLSAS*RAANALDAGVE
Trigger: CTCAACTCCTGCGTCCAGGGCGTTCGCTGCGCGCCAGGACGCGCTTAGTACCCAGTTCCTGGGCTCTCTCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS CAA 90 bp GCCCTGGACGCAGGAGTTGAGCTCAGCGGCTGCTTTGGAGCAGAGTaGAGGAGTGCAGCCCGTAAGGCAAGCACTCGGCGTCCAAGGGTT +
Preference number: 6 (lower is better)
Translates to: ALDAGVELSGCFGAE*RSAARKASTRRPRV
Trigger: AACCCTTGGACGCCGAGTGCTTGCCTTACGGGCTGCACTCCTCAACTCTGCTCCAAAGCAGCCGCTGAGCTCAACTCCTGCGTCCAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS TCA 72 bp TCGTGTTGGCCGCCTCCAGAAGGTCCGGGACCAGACTaGAGAGTTCTGCTAGCTTGTCCCCGCCTGCTGCCT +
Preference number: 6 (lower is better)
Translates to: SCWPPPEGPGPD*RVLLACPRLLP
Trigger: AGGCAGCAGGCGGGGACAAGCTAGCAGAACTCTTCAGTCTGGTCCCGGACCTTCTGGAGGCGGCCAACACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS TCA 72 bp GGAAACGCACCAGGCACAGCTCCTCGCCCATCACCTTaGCCGTGGTGGAGAAAATGGCACTGGGCAGCGAGG +
Preference number: 6 (lower is better)
Translates to: GNAPGTAPRPSP*PWWRKWHWAAR
Trigger: CCTCGCTGCCCAGTGCCATTTTCTCCACCACGGTCAAGGTGATGGGCGAGGAGCTGTGCCTGGTGCGTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS GCA 72 bp GCGAACGCCCTGGACGCAGGAGTTGAGCTCAGCGGCTaGTTTGGAGCAGAGTTGAGGAGTGCAGCCCGTAAG +
Preference number: 6 (lower is better)
Translates to: ANALDAGVELSG*FGAELRSAARK
Trigger: CTTACGGGCTGCACTCCTCAACTCTGCTCCAAAGCAGCCGCTGAGCTCAACTCCTGCGTCCAGGGCGTTCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS CAA 72 bp AAGTCCGGAAGCTGCAGCGACGCGTTACCACTCGTGTaGGCCGCCTCCAGAAGGTCCGGGACCAGACTGAAG +
Preference number: 6 (lower is better)
Translates to: KSGSCSDALPLV*AASRRSGTRLK
Trigger: CTTCAGTCTGGTCCCGGACCTTCTGGAGGCGGCCAACACGAGTGGTAACGCGTCGCTGCAGCTTCCGGACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS CAA 90 bp TCCCACCACAAGTCCGGAAGCTGCAGCGACGCGTTACCACTCGTGTaGGCCGCCTCCAGAAGGTCCGGGACCAGACTGAAGAGTTCTGCT +
Preference number: 6 (lower is better)
Translates to: SHHKSGSCSDALPLV*AASRRSGTRLKSSA
Trigger: AGCAGAACTCTTCAGTCTGGTCCCGGACCTTCTGGAGGCGGCCAACACGAGTGGTAACGCGTCGCTGCAGCTTCCGGACTTGTGGTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS CAA 90 bp GGCAGCCAACACAGGAAGAAGGACAGGACAACGATGGTCACTGATTaGGTGACCTTCGACAGTCTCCGGGCGCTGGCTCCGGTCGGGCGT +
Preference number: 6 (lower is better)
Translates to: GSQHRKKDRTTMVTD*VTFDSLRALAPVGR
Trigger: ACGCCCGACCGGAGCCAGCGCCCGGAGACTGTCGAAGGTCACCAAATCAGTGACCATCGTTGTCCTGTCCTTCTTCCTGTGTTGGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS TCA 72 bp CAGGAGTTGAGCTCAGCGGCTGCTTTGGAGCAGAGTTaGGGAGTGCAGCCCGTAAGGCAAGCACTCGGCGTC +
Preference number: 6 (lower is better)
Translates to: QELSSAAALEQS*GVQPVRQALGV
Trigger: GACGCCGAGTGCTTGCCTTACGGGCTGCACTCCTCAACTCTGCTCCAAAGCAGCCGCTGAGCTCAACTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS CCA 72 bp TGCGCTAGGCACACGCTCACAGGGAACGCGTATACCTaGCACAGGAAATACTCCTGGCTGAAGGGCACCGCG +
Preference number: 6 (lower is better)
Translates to: CARHTLTGNAYT*HRKYSWLKGTA
Trigger: CGCGGTGCCCTTCAGCCAGGAGTATTTCCTGTGCCAGGTATACGCGTTCCCTGTGAGCGTGTGCCTAGCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS CAA 90 bp GCCGCCTCCAGAAGGTCCGGGACCAGACTGAAGAGTTCTGCTAGCTaGTCCCCGCCTGCTGCCTTATTCATGGTGGCTATCGTGGCTGCA +
Preference number: 6 (lower is better)
Translates to: AASRRSGTRLKSSAS*SPPAALFMVAIVAA
Trigger: TGCAGCCACGATAGCCACCATGAATAAGGCAGCAGGCGGGGACAAGCTAGCAGAACTCTTCAGTCTGGTCCCGGACCTTCTGGAGGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS TCA 72 bp AGTCAAGAGCGTTCTCCACCGCCCAGAAGGGCAGGGTaGGCACAAACTGAAAGTCCGTCAGCGCCAGGTTGG +
Preference number: 6 (lower is better)
Translates to: SQERSPPPRRAG*AQTESPSAPGW
Trigger: CCAACCTGGCGCTGACGGACTTTCAGTTTGTGCTCACCCTGCCCTTCTGGGCGGTGGAGAACGCTCTTGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS TCA 72 bp GGAAGAAGGACAGGACAACGATGGTCACTGATTTGGTaGCCTTCGACAGTCTCCGGGCGCTGGCTCCGGTCG +
Preference number: 6 (lower is better)
Translates to: GRRTGQRWSLIW*PSTVSGRWLRS
Trigger: CGACCGGAGCCAGCGCCCGGAGACTGTCGAAGGTCACCAAATCAGTGACCATCGTTGTCCTGTCCTTCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS GCA 72 bp CCCGCCTGCTGCCTTATTCATGGTGGCTATCGTGGCTaGATCGGCCATCTGCATGCGCAGGTACCTCTAGGT +
Preference number: 6 (lower is better)
Translates to: PACCLIHGGYRG*IGHLHAQVPLG
Trigger: ACCTAGAGGTACCTGCGCATGCAGATGGCCGATGCAGCCACGATAGCCACCATGAATAAGGCAGCAGGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS CCA 72 bp CTTTCAAAGCAGCTACTGAAGAGAGAGCCCAGGAACTaGGTACTAAGCGCGTCCTGGCGCGCAGCGAACGCC +
Preference number: 6 (lower is better)
Translates to: LSKQLLKREPRN*VLSASWRAANA
Trigger: GGCGTTCGCTGCGCGCCAGGACGCGCTTAGTACCCAGTTCCTGGGCTCTCTCTTCAGTAGCTGCTTTGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS CCA 72 bp TGTCCCCGCCTGCTGCCTTATTCATGGTGGCTATCGTaGCTGCATCGGCCATCTGCATGCGCAGGTACCTCT +
Preference number: 6 (lower is better)
Translates to: CPRLLPYSWWLS*LHRPSACAGTS
Trigger: AGAGGTACCTGCGCATGCAGATGGCCGATGCAGCCACGATAGCCACCATGAATAAGGCAGCAGGCGGGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS CCA 72 bp CTGCTAGCTTGTCCCCGCCTGCTGCCTTATTCATGGTaGCTATCGTGGCTGCATCGGCCATCTGCATGCGCA +
Preference number: 6 (lower is better)
Translates to: LLACPRLLPYSW*LSWLHRPSACA
Trigger: TGCGCATGCAGATGGCCGATGCAGCCACGATAGCCACCATGAATAAGGCAGCAGGCGGGGACAAGCTAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS CAA 90 bp ACCTGGCACAGGAAATACTCCTGGCTGAAGGGCACCGCGTTGAACTaGATGAGGATGCTCCAGGTGGTGAGCGCCTGGTTGGGCAGCCAA +
Preference number: 6 (lower is better)
Translates to: TWHRKYSWLKGTALN*MRMLQVVSAWLGSQ
Trigger: TTGGCTGCCCAACCAGGCGCTCACCACCTGGAGCATCCTCATCAAGTTCAACGCGGTGCCCTTCAGCCAGGAGTATTTCCTGTGCCAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS CAA 90 bp GCGTATACCTGGCACAGGAAATACTCCTGGCTGAAGGGCACCGCGTaGAACTTGATGAGGATGCTCCAGGTGGTGAGCGCCTGGTTGGGC +
Preference number: 6 (lower is better)
Translates to: AYTWHRKYSWLKGTA*NLMRMLQVVSAWLG
Trigger: GCCCAACCAGGCGCTCACCACCTGGAGCATCCTCATCAAGTTCAACGCGGTGCCCTTCAGCCAGGAGTATTTCCTGTGCCAGGTATACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS CCA 72 bp GTTCTGCTAGCTTGTCCCCGCCTGCTGCCTTATTCATaGTGGCTATCGTGGCTGCATCGGCCATCTGCATGC +
Preference number: 6 (lower is better)
Translates to: VLLACPRLLPYS*WLSWLHRPSAC
Trigger: GCATGCAGATGGCCGATGCAGCCACGATAGCCACCATGAATAAGGCAGCAGGCGGGGACAAGCTAGCAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS CAA 72 bp CACAGGAAGAAGGACAGGACAACGATGGTCACTGATTaGGTGACCTTCGACAGTCTCCGGGCGCTGGCTCCG +
Preference number: 6 (lower is better)
Translates to: HRKKDRTTMVTD*VTFDSLRALAP
Trigger: CGGAGCCAGCGCCCGGAGACTGTCGAAGGTCACCAAATCAGTGACCATCGTTGTCCTGTCCTTCTTCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS CAA 72 bp TGGCACAGGAAATACTCCTGGCTGAAGGGCACCGCGTaGAACTTGATGAGGATGCTCCAGGTGGTGAGCGCC +
Preference number: 6 (lower is better)
Translates to: WHRKYSWLKGTA*NLMRMLQVVSA
Trigger: GGCGCTCACCACCTGGAGCATCCTCATCAAGTTCAACGCGGTGCCCTTCAGCCAGGAGTATTTCCTGTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS TCA 72 bp CCAACACAGGAAGAAGGACAGGACAACGATGGTCACTaGTTTGGTGACCTTCGACAGTCTCCGGGCGCTGGC +
Preference number: 6 (lower is better)
Translates to: PTQEEGQDNDGH*FGDLRQSPGAG
Trigger: GCCAGCGCCCGGAGACTGTCGAAGGTCACCAAATCAGTGACCATCGTTGTCCTGTCCTTCTTCCTGTGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS GCA 72 bp TCATGGTGGCTATCGTGGCTGCATCGGCCATCTGCATaGGCAGGTACCTCTAGGTCATGTTCTGGGGGACAA +
Preference number: 6 (lower is better)
Translates to: SWWLSWLHRPSA*AGTSRSCSGGQ
Trigger: TTGTCCCCCAGAACATGACCTAGAGGTACCTGCGCATGCAGATGGCCGATGCAGCCACGATAGCCACCATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS CAA 72 bp AGGAAATACTCCTGGCTGAAGGGCACCGCGTTGAACTaGATGAGGATGCTCCAGGTGGTGAGCGCCTGGTTG +
Preference number: 6 (lower is better)
Translates to: RKYSWLKGTALN*MRMLQVVSAWL
Trigger: CAACCAGGCGCTCACCACCTGGAGCATCCTCATCAAGTTCAACGCGGTGCCCTTCAGCCAGGAGTATTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS CCA 72 bp AGAACACGCTGGCGTACATGTTCATGGACGTCACCATaGACACGATCTTACACATGGCCTTGCCGAAGGGCC +
Preference number: 6 (lower is better)
Translates to: RTRWRTCSWTSP*TRSYTWPCRRA
Trigger: GGCCCTTCGGCAAGGCCATGTGTAAGATCGTGTCCATGGTGACGTCCATGAACATGTACGCCAGCGTGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS CAA 72 bp AGAAGGTCCGGGACCAGACTGAAGAGTTCTGCTAGCTaGTCCCCGCCTGCTGCCTTATTCATGGTGGCTATC +
Preference number: 6 (lower is better)
Translates to: RRSGTRLKSSAS*SPPAALFMVAI
Trigger: GATAGCCACCATGAATAAGGCAGCAGGCGGGGACAAGCTAGCAGAACTCTTCAGTCTGGTCCCGGACCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS CAA 90 bp TACATGTTCATGGACGTCACCATGGACACGATCTTACACATGGCCTaGCCGAAGGGCCATTTGAAGTCAAGAGCGTTCTCCACCGCCCAG +
Preference number: 6 (lower is better)
Translates to: YMFMDVTMDTILHMA*PKGHLKSRAFSTAQ
Trigger: CTGGGCGGTGGAGAACGCTCTTGACTTCAAATGGCCCTTCGGCAAGGCCATGTGTAAGATCGTGTCCATGGTGACGTCCATGAACATGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2
CDS CAA 72 bp ATGGACGTCACCATGGACACGATCTTACACATGGCCTaGCCGAAGGGCCATTTGAAGTCAAGAGCGTTCTCC +
Preference number: 6 (lower is better)
Translates to: MDVTMDTILHMA*PKGHLKSRAFS
Trigger: GGAGAACGCTCTTGACTTCAAATGGCCCTTCGGCAAGGCCATGTGTAAGATCGTGTCCATGGTGACGTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330120.5
ENST00000616205.2