Pregenerated sensors for RWDD3 (Homo sapiens)
Ensembl gene IDs: ENSG00000122481Ensembl transcript IDs: ENST00000263893.10, ENST00000370202.5, ENST00000460571.1, ENST00000473397.1, ENST00000492639.5, ENST00000495272.5, ENST00000497058.5
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ACTGAACCTAGCCTTTCCTGGCAAACATTAGAATATACAAGTTTTCTTCATGTTACGCTGAATACTCTTTaGCTTCAAATGCCAGAAACA | + |
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Preference number: 2 (lower is better) Translates to: TEPSLSWQTLEYTSFLHVTLNTL*LQMPET Trigger: TGTTTCTGGCATTTGAAGTCAAAGAGTATTCAGCGT...AACATGAAGAAAACTTGTATATTCTAATGTTTGCCAGGAAAGGCTAGGTTCAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263893.10 |
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| 3UTR-3UTR CAA 90 bp | ACTGAACCTAGCCTTTCCTGGCAAACATTAGAATATACAAGTTTTCTTCATGTTAACGCTGAATACTCTTaGACTTCAAATGCCAGAAAC | + |
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Preference number: 3 (lower is better) Translates to: TEPSLSWQTLEYTSFLHVNAEYS*TSNARN Trigger: GTTTCTGGCATTTGAAGTCAAAGAGTATTCAGCGTT...AACATGAAGAAAACTTGTATATTCTAATGTTTGCCAGGAAAGGCTAGGTTCAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263893.10 |
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| CDS-3UTR CCA 90 bp | ACTGAACCTAGCCTTTCCTGGCAAACATTAGAATATACAAGTTTTCTTCATGTTGCACAGGCTCCGCCATaGCTGTGGGCCCCACCGCCT | + |
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Preference number: 4 (lower is better) Translates to: TEPSLSWQTLEYTSFLHVAQAPP*LWAPPP Trigger: AGGCGGTGGGGCCCACAGCCATGGCGGAGCCTGTGC...AACATGAAGAAAACTTGTATATTCTAATGTTTGCCAGGAAAGGCTAGGTTCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000263893.10 ENST00000370202.5 |
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| CDS-3UTR TCA 90 bp | AGTCCTGCAGTTTCAAATTCCTTTTGTAATTCATCCAACGCTGAATACTCTTTGGGTCCCATCTGTCTCTaGGCGGCTCAGCACCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: SPAVSNSFCNSSNAEYSLGPICL*AAQHLP Trigger: TGGGAGGTGCTGAGCCGCTCAGAGACAGATGGGACC...CAAAGAGTATTCAGCGTTGGATGAATTACAAAAGGAATTTGAAACTGCAGGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263893.10 |
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| CDS-3UTR TCA 90 bp | ACTGAACCTAGCCTTTCCTGGCAAACATTAGAATATACAAGTTTTCTTCATGTTGGTCCCATCTGTCTCTaGGCGGCTCAGCACCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: TEPSLSWQTLEYTSFLHVGPICL*AAQHLP Trigger: TGGGAGGTGCTGAGCCGCTCAGAGACAGATGGGACC...AACATGAAGAAAACTTGTATATTCTAATGTTTGCCAGGAAAGGCTAGGTTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263893.10 ENST00000370202.5 |
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| CDS-3UTR GCA 90 bp | ACTGAACCTAGCCTTTCCTGGCAAACATTAGAATATACAAGTTTTCTTCATGTTACCGAGAGCTCCTCCTaGACAGGCTCCGCCATGGCT | + |
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Preference number: 4 (lower is better) Translates to: TEPSLSWQTLEYTSFLHVTESSS*TGSAMA Trigger: AGCCATGGCGGAGCCTGTGCAGGAGGAGCTCTCGGT...AACATGAAGAAAACTTGTATATTCTAATGTTTGCCAGGAAAGGCTAGGTTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263893.10 ENST00000370202.5 |
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| CDS-3UTR GCA 90 bp | ACTGAACCTAGCCTTTCCTGGCAAACATTAGAATATACAAGTTTTCTTCATGTTCCCACTCGTGGGGCCTaGAGAAAATCGCGGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TEPSLSWQTLEYTSFLHVPTRGA*RKSRPG Trigger: TCCTGGCCGCGATTTTCTGCAGGCCCCACGAGTGGG...AACATGAAGAAAACTTGTATATTCTAATGTTTGCCAGGAAAGGCTAGGTTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000263893.10 ENST00000370202.5 |
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| CDS-3UTR CCA 90 bp | AGTCCTGCAGTTTCAAATTCCTTTTGTAATTCATCCAACGCTGAATACTCTTTGAGCACCTCCCACTCGTaGGGCCTGCAGAAAATCGCG | + |
|
Preference number: 4 (lower is better) Translates to: SPAVSNSFCNSSNAEYSLSTSHS*GLQKIA Trigger: CGCGATTTTCTGCAGGCCCCACGAGTGGGAGGTGCT...CAAAGAGTATTCAGCGTTGGATGAATTACAAAAGGAATTTGAAACTGCAGGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000263893.10 |
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| CDS-3UTR CCA 90 bp | ACTGAACCTAGCCTTTCCTGGCAAACATTAGAATATACAAGTTTTCTTCATGTTAGCACCTCCCACTCGTaGGGCCTGCAGAAAATCGCG | + |
|
Preference number: 4 (lower is better) Translates to: TEPSLSWQTLEYTSFLHVSTSHS*GLQKIA Trigger: CGCGATTTTCTGCAGGCCCCACGAGTGGGAGGTGCT...AACATGAAGAAAACTTGTATATTCTAATGTTTGCCAGGAAAGGCTAGGTTCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000263893.10 ENST00000370202.5 |
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| CDS-3UTR TCA 90 bp | AGTCCTGCAGTTTCAAATTCCTTTTGTAATTCATCCAACGCTGAATACTCTTTGTGCCTGAGATTCTGCTaGATCCAGAGAACCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SPAVSNSFCNSSNAEYSLCLRFC*IQRTSS Trigger: TGAGCTGGTTCTCTGGATTCAGCAGAATCTCAGGCA...CAAAGAGTATTCAGCGTTGGATGAATTACAAAAGGAATTTGAAACTGCAGGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263893.10 |
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| CDS-3UTR CCA 90 bp | AGTCCTGCAGTTTCAAATTCCTTTTGTAATTCATCCAACGCTGAATACTCTTTGTTCACAGTCACACACTaGGCCCTGGTCAACTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SPAVSNSFCNSSNAEYSLFTVTH*ALVNCS Trigger: TGAACAGTTGACCAGGGCCCAGTGTGTGACTGTGAA...CAAAGAGTATTCAGCGTTGGATGAATTACAAAAGGAATTTGAAACTGCAGGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263893.10 |
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| CDS-3UTR CCA 90 bp | ACTGAACCTAGCCTTTCCTGGCAAACATTAGAATATACAAGTTTTCTTCATGTTGCCACTGCCAGTTTCTaGTTGGCTGAGGATATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TEPSLSWQTLEYTSFLHVATASF*LAEDMP Trigger: AGGCATATCCTCAGCCAACCAGAAACTGGCAGTGGC...AACATGAAGAAAACTTGTATATTCTAATGTTTGCCAGGAAAGGCTAGGTTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263893.10 ENST00000370202.5 |
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| CDS-3UTR TCA 90 bp | ACTGAACCTAGCCTTTCCTGGCAAACATTAGAATATACAAGTTTTCTTCATGTTCAGAGAACCAGCTCATaGACCATAGGCTCCGACAAA | + |
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Preference number: 4 (lower is better) Translates to: TEPSLSWQTLEYTSFLHVQRTSS*TIGSDK Trigger: TTTGTCGGAGCCTATGGTTCATGAGCTGGTTCTCTG...AACATGAAGAAAACTTGTATATTCTAATGTTTGCCAGGAAAGGCTAGGTTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263893.10 ENST00000370202.5 |
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| CDS-3UTR TCA 90 bp | ACTGAACCTAGCCTTTCCTGGCAAACATTAGAATATACAAGTTTTCTTCATGTTTGCCTGAGATTCTGCTaGATCCAGAGAACCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TEPSLSWQTLEYTSFLHVCLRFC*IQRTSS Trigger: TGAGCTGGTTCTCTGGATTCAGCAGAATCTCAGGCA...AACATGAAGAAAACTTGTATATTCTAATGTTTGCCAGGAAAGGCTAGGTTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263893.10 ENST00000370202.5 |
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| CDS-3UTR CCA 90 bp | ACTGAACCTAGCCTTTCCTGGCAAACATTAGAATATACAAGTTTTCTTCATGTTTTCACAGTCACACACTaGGCCCTGGTCAACTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TEPSLSWQTLEYTSFLHVFTVTH*ALVNCS Trigger: TGAACAGTTGACCAGGGCCCAGTGTGTGACTGTGAA...AACATGAAGAAAACTTGTATATTCTAATGTTTGCCAGGAAAGGCTAGGTTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000263893.10 ENST00000370202.5 |
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| CDS-3UTR CCA 90 bp | ACTGAACCTAGCCTTTCCTGGCAAACATTAGAATATACAAGTTTTCTTCATGTTCTGCCAGTTTCTGGTTaGCTGAGGATATGCCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TEPSLSWQTLEYTSFLHVLPVSG*LRICLR Trigger: TCTCAGGCATATCCTCAGCCAACCAGAAACTGGCAG...AACATGAAGAAAACTTGTATATTCTAATGTTTGCCAGGAAAGGCTAGGTTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263893.10 ENST00000370202.5 |
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| CDS-3UTR TCA 90 bp | AGTCCTGCAGTTTCAAATTCCTTTTGTAATTCATCCAACGCTGAATACTCTTTGCTTTTGTGTGAATTCTaGACACGGTCCCATCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPAVSNSFCNSSNAEYSLLLCEF*TRSHLS Trigger: AGACAGATGGGACCGTGTTCAGAATTCACACAAAAG...CAAAGAGTATTCAGCGTTGGATGAATTACAAAAGGAATTTGAAACTGCAGGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000263893.10 |
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| CDS-3UTR TCA 90 bp | ACTGAACCTAGCCTTTCCTGGCAAACATTAGAATATACAAGTTTTCTTCATGTTCCTTCAGCTTTTGTGTaGATTCTGAACACGGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TEPSLSWQTLEYTSFLHVPSAFV*ILNTVP Trigger: TGGGACCGTGTTCAGAATTCACACAAAAGCTGAAGG...AACATGAAGAAAACTTGTATATTCTAATGTTTGCCAGGAAAGGCTAGGTTCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000263893.10 ENST00000370202.5 |
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| CDS-3UTR TCA 90 bp | AGTCCTGCAGTTTCAAATTCCTTTTGTAATTCATCCAACGCTGAATACTCTTTGAACTTTTTGGCACCTTaGGGTTGTTTCTGTCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SPAVSNSFCNSSNAEYSLNFLAP*GCFCLP Trigger: AGGGAGACAGAAACAACCTCAAGGTGCCAAAAAGTT...CAAAGAGTATTCAGCGTTGGATGAATTACAAAAGGAATTTGAAACTGCAGGACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000263893.10 |
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| CDS-3UTR TCA 90 bp | ACTGAACCTAGCCTTTCCTGGCAAACATTAGAATATACAAGTTTTCTTCATGTTCTTTTGTGTGAATTCTaGACACGGTCCCATCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TEPSLSWQTLEYTSFLHVLLCEF*TRSHLS Trigger: AGACAGATGGGACCGTGTTCAGAATTCACACAAAAG...AACATGAAGAAAACTTGTATATTCTAATGTTTGCCAGGAAAGGCTAGGTTCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000263893.10 ENST00000370202.5 |
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| CDS-3UTR TCA 90 bp | ACTGAACCTAGCCTTTCCTGGCAAACATTAGAATATACAAGTTTTCTTCATGTTGAATCAAGTACTCCTTaGGGTTGTTTCTGTCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TEPSLSWQTLEYTSFLHVESSTP*GCFCLP Trigger: AGGGAGACAGAAACAACCTCAAGGAGTACTTGATTC...AACATGAAGAAAACTTGTATATTCTAATGTTTGCCAGGAAAGGCTAGGTTCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370202.5 |
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| CDS-3UTR TCA 90 bp | AGTCCTGCAGTTTCAAATTCCTTTTGTAATTCATCCAACGCTGAATACTCTTTGCATGGTCGTGCTTGTTaGAAAAGTACACTTTTCACT | + |
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Preference number: 4 (lower is better) Translates to: SPAVSNSFCNSSNAEYSLHGRAC*KSTLFT Trigger: AGTGAAAAGTGTACTTTTTCAACAAGCACGACCATG...CAAAGAGTATTCAGCGTTGGATGAATTACAAAAGGAATTTGAAACTGCAGGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000263893.10 |
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| CDS-3UTR TCA 90 bp | ACTGAACCTAGCCTTTCCTGGCAAACATTAGAATATACAAGTTTTCTTCATGTTGCATTTCTTTCCACTTaGGTCCACATCTACTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TEPSLSWQTLEYTSFLHVAFLST*VHIYFG Trigger: TCCAAAGTAGATGTGGACTCAAGTGGAAAGAAATGC...AACATGAAGAAAACTTGTATATTCTAATGTTTGCCAGGAAAGGCTAGGTTCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370202.5 |
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| CDS-3UTR TCA 90 bp | ACTGAACCTAGCCTTTCCTGGCAAACATTAGAATATACAAGTTTTCTTCATGTTACGCTGAATACTCTTTaGCTTCAAATGCCAGAAACC | + |
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Preference number: 4 (lower is better) Translates to: TEPSLSWQTLEYTSFLHVTLNTL*LQMPET Trigger: GGTTTCTGGCATTTGAAGTCAAAGAGTATTCAGCGT...AACATGAAGAAAACTTGTATATTCTAATGTTTGCCAGGAAAGGCTAGGTTCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370202.5 |
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| CDS-3UTR GCA 90 bp | ACTGAACCTAGCCTTTCCTGGCAAACATTAGAATATACAAGTTTTCTTCATGTTAAGTACACTTTTCACTaGCACTGCCAGTTTCTGGTT | + |
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Preference number: 4 (lower is better) Translates to: TEPSLSWQTLEYTSFLHVKYTFH*HCQFLV Trigger: AACCAGAAACTGGCAGTGGCAGTGAAAAGTGTACTT...AACATGAAGAAAACTTGTATATTCTAATGTTTGCCAGGAAAGGCTAGGTTCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000263893.10 ENST00000370202.5 |
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| CDS-3UTR GCA 90 bp | AGTCCTGCAGTTTCAAATTCCTTTTGTAATTCATCCAACGCTGAATACTCTTTGCATCATCCATGGTCGTaGTTGTTGAAAAAGTACACT | + |
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Preference number: 4 (lower is better) Translates to: SPAVSNSFCNSSNAEYSLHHPWS*LLKKYT Trigger: AGTGTACTTTTTCAACAAGCACGACCATGGATGATG...CAAAGAGTATTCAGCGTTGGATGAATTACAAAAGGAATTTGAAACTGCAGGACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000263893.10 |
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| CDS-3UTR CCA 90 bp | AGTCCTGCAGTTTCAAATTCCTTTTGTAATTCATCCAACGCTGAATACTCTTTGACAATCCATCATCCATaGTCGTGCTTGTTGAAAAAG | + |
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Preference number: 4 (lower is better) Translates to: SPAVSNSFCNSSNAEYSLTIHHP*SCLLKK Trigger: CTTTTTCAACAAGCACGACCATGGATGATGGATTGT...CAAAGAGTATTCAGCGTTGGATGAATTACAAAAGGAATTTGAAACTGCAGGACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000263893.10 |
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| CDS-3UTR TCA 90 bp | ACTGAACCTAGCCTTTCCTGGCAAACATTAGAATATACAAGTTTTCTTCATGTTCATGGTCGTGCTTGTTaGAAAAGTACACTTTTCACT | + |
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Preference number: 4 (lower is better) Translates to: TEPSLSWQTLEYTSFLHVHGRAC*KSTLFT Trigger: AGTGAAAAGTGTACTTTTTCAACAAGCACGACCATG...AACATGAAGAAAACTTGTATATTCTAATGTTTGCCAGGAAAGGCTAGGTTCAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000263893.10 ENST00000370202.5 |
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| CDS-3UTR TCA 90 bp | AGTCCTGCAGTTTCAAATTCCTTTTGTAATTCATCCAACGCTGAATACTCTTTGGTCTTTGCTCTCATGTaGTCTAAATGCAAAAGAGTT | + |
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Preference number: 4 (lower is better) Translates to: SPAVSNSFCNSSNAEYSLVFALM*SKCKRV Trigger: AACTCTTTTGCATTTAGATCACATGAGAGCAAAGAC...CAAAGAGTATTCAGCGTTGGATGAATTACAAAAGGAATTTGAAACTGCAGGACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000263893.10 |
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| CDS-3UTR CCA 90 bp | ACTGAACCTAGCCTTTCCTGGCAAACATTAGAATATACAAGTTTTCTTCATGTTACAATCCATCATCCATaGTCGTGCTTGTTGAAAAAG | + |
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Preference number: 4 (lower is better) Translates to: TEPSLSWQTLEYTSFLHVTIHHP*SCLLKK Trigger: CTTTTTCAACAAGCACGACCATGGATGATGGATTGT...AACATGAAGAAAACTTGTATATTCTAATGTTTGCCAGGAAAGGCTAGGTTCAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000263893.10 ENST00000370202.5 |
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| CDS-3UTR TCA 90 bp | ACTGAACCTAGCCTTTCCTGGCAAACATTAGAATATACAAGTTTTCTTCATGTTGTCTTTGCTCTCATGTaGTCTAAATGCAAAAGAGTT | + |
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Preference number: 4 (lower is better) Translates to: TEPSLSWQTLEYTSFLHVVFALM*SKCKRV Trigger: AACTCTTTTGCATTTAGATCACATGAGAGCAAAGAC...AACATGAAGAAAACTTGTATATTCTAATGTTTGCCAGGAAAGGCTAGGTTCAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000263893.10 ENST00000370202.5 |
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| CDS-3UTR TCA 90 bp | ACTGAACCTAGCCTTTCCTGGCAAACATTAGAATATACAAGTTTTCTTCATGTTTTCCTGAAGTTAGAATaGTGCCTATCATTTTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: TEPSLSWQTLEYTSFLHVFLKLE*CLSFCF Trigger: GAAGCAAAATGATAGGCATCATTCTAACTTCAGGAA...AACATGAAGAAAACTTGTATATTCTAATGTTTGCCAGGAAAGGCTAGGTTCAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000263893.10 ENST00000370202.5 |
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| CDS-3UTR GCA 90 bp | ACTGAACCTAGCCTTTCCTGGCAAACATTAGAATATACAAGTTTTCTTCATGTTAAAAGGCTCTCTGCTTaGTCAAGTAAATTCTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: TEPSLSWQTLEYTSFLHVKRLSA*SSKFSF Trigger: GAAAGAGAATTTACTTGAGCAAGCAGAGAGCCTTTT...AACATGAAGAAAACTTGTATATTCTAATGTTTGCCAGGAAAGGCTAGGTTCAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000263893.10 ENST00000370202.5 |
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| CDS-3UTR GCA 90 bp | AGTCCTGCAGTTTCAAATTCCTTTTGTAATTCATCCAACGCTGAATACTCTTTGAAGCTTCTTAAGTCCTaGAGTTTCAAATTCCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: SPAVSNSFCNSSNAEYSLKLLKS*SFKFLL Trigger: CAAAAGGAATTTGAAACTGCAGGACTTAAGAAGCTT...CAAAGAGTATTCAGCGTTGGATGAATTACAAAAGGAATTTGAAACTGCAGGACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000263893.10 |
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| CDS-3UTR GCA 90 bp | ACTGAACCTAGCCTTTCCTGGCAAACATTAGAATATACAAGTTTTCTTCATGTTCTCTTTGACTTCAAATaGCAGAAACCTTTTGTGTTC | + |
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Preference number: 4 (lower is better) Translates to: TEPSLSWQTLEYTSFLHVLFDFK*QKPFVF Trigger: GAACACAAAAGGTTTCTGGCATTTGAAGTCAAAGAG...AACATGAAGAAAACTTGTATATTCTAATGTTTGCCAGGAAAGGCTAGGTTCAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370202.5 |
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| CDS-3UTR CCA 90 bp | ACTGAACCTAGCCTTTCCTGGCAAACATTAGAATATACAAGTTTTCTTCATGTTGAACCTAGCCTTTCCTaGCAAACATTAGAATATACA | + |
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Preference number: 4 (lower is better) Translates to: TEPSLSWQTLEYTSFLHVEPSLS*QTLEYT Trigger: TGTATATTCTAATGTTTGCCAGGAAAGGCTAGGTTC...AACATGAAGAAAACTTGTATATTCTAATGTTTGCCAGGAAAGGCTAGGTTCAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263893.10 ENST00000370202.5 |
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| CDS-3UTR CCA 90 bp | ACTGAACCTAGCCTTTCCTGGCAAACATTAGAATATACAAGTTTTCTTCATGTTAGTCCACATCTACTTTaGAGGTTTTCTGAAGAATCA | + |
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Preference number: 4 (lower is better) Translates to: TEPSLSWQTLEYTSFLHVSPHLL*RFSEES Trigger: TGATTCTTCAGAAAACCTCCAAAGTAGATGTGGACT...AACATGAAGAAAACTTGTATATTCTAATGTTTGCCAGGAAAGGCTAGGTTCAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370202.5 |
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| CDS-3UTR GCA 90 bp | ACTGAACCTAGCCTTTCCTGGCAAACATTAGAATATACAAGTTTTCTTCATGTTAAGCTTCTTAAGTCCTaGAGTTTCAAATTCCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: TEPSLSWQTLEYTSFLHVKLLKS*SFKFLL Trigger: CAAAAGGAATTTGAAACTGCAGGACTTAAGAAGCTT...AACATGAAGAAAACTTGTATATTCTAATGTTTGCCAGGAAAGGCTAGGTTCAGT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000263893.10 ENST00000370202.5 |
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| CDS GCA 90 bp | TCCCATCTGTCTCTGAGCGGCTCAGCACCTCCCACTCGTGGGGCCTaGAGAAAATCGCGGCCAGGACCGAGAGCTCCTCCTGCACAGGCT | + |
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Preference number: 5 (lower is better) Translates to: SHLSLSGSAPPTRGA*RKSRPGPRAPPAQA Trigger: AGCCTGTGCAGGAGGAGCTCTCGGTCCTGGCCGCGATTTTCTGCAGGCCCCACGAGTGGGAGGTGCTGAGCCGCTCAGAGACAGATGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000263893.10 ENST00000370202.5 |
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| CDS CCA 90 bp | AACACGGTCCCATCTGTCTCTGAGCGGCTCAGCACCTCCCACTCGTaGGGCCTGCAGAAAATCGCGGCCAGGACCGAGAGCTCCTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: NTVPSVSERLSTSHS*GLQKIAARTESSSC Trigger: GCAGGAGGAGCTCTCGGTCCTGGCCGCGATTTTCTGCAGGCCCCACGAGTGGGAGGTGCTGAGCCGCTCAGAGACAGATGGGACCGTGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263893.10 ENST00000370202.5 |
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| CDS CCA 90 bp | CAGTGGCAAAAGGGAGAACCTGAGCGGCTCAGCACCTCCCACTCGTaGGGCCTGCAGAAAATCGCGGCCAGGACCGAGAGCTCCTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: QWQKGEPERLSTSHS*GLQKIAARTESSSC Trigger: GCAGGAGGAGCTCTCGGTCCTGGCCGCGATTTTCTGCAGGCCCCACGAGTGGGAGGTGCTGAGCCGCTCAGGTTCTCCCTTTTGCCACTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492639.5 |
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| CDS CCA 90 bp | TCTGTGTTATTTTCTGGTCCTGAGCGGCTCAGCACCTCCCACTCGTaGGGCCTGCAGAAAATCGCGGCCAGGACCGAGAGCTCCTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: SVLFSGPERLSTSHS*GLQKIAARTESSSC Trigger: GCAGGAGGAGCTCTCGGTCCTGGCCGCGATTTTCTGCAGGCCCCACGAGTGGGAGGTGCTGAGCCGCTCAGGACCAGAAAATAACACAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000495272.5 ENST00000497058.5 |
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| CDS TCA 90 bp | GGGTTATCTTGTTACCAGGAATGCAATTCCTCTGCAACATTCTCCTaGTTCCAGTGGCAAAAGGGAGAACCTGAGCGGCTCAGCACCTCC | + |
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Preference number: 5 (lower is better) Translates to: GLSCYQECNSSATFS*FQWQKGEPERLSTS Trigger: GGAGGTGCTGAGCCGCTCAGGTTCTCCCTTTTGCCACTGGAATCAGGAGAATGTTGCAGAGGAATTGCATTCCTGGTAACAAGATAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492639.5 |
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| CDS TCA 90 bp | TGCAAAGCACTAGAGGAGTATCTAGATATAGCGCCATGGCACACTTaGGAGCACAAGCCACTGTTCTTACTATTACAAGTTCAGCAGCTA | + |
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Preference number: 5 (lower is better) Translates to: CKALEEYLDIAPWHT*EHKPLFLLLQVQQL Trigger: TAGCTGCTGAACTTGTAATAGTAAGAACAGTGGCTTGTGCTCTCAAGTGTGCCATGGCGCTATATCTAGATACTCCTCTAGTGCTTTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460571.1 |
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| CDS-3UTR CAA 90 bp | AGTCCTGCAGTTTCAAATTCCTTTTGTAATTCATCCAACGCTGAATACTCTTTGACTGCCAGTTTCTGGTaGGCTGAGGATATGCCTGAG | + |
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Preference number: 5 (lower is better) Translates to: SPAVSNSFCNSSNAEYSLTASFW*AEDMPE Trigger: CTCAGGCATATCCTCAGCCAACCAGAAACTGGCAGT...CAAAGAGTATTCAGCGTTGGATGAATTACAAAAGGAATTTGAAACTGCAGGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263893.10 |
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| CDS-3UTR CAA 90 bp | ACTGAACCTAGCCTTTCCTGGCAAACATTAGAATATACAAGTTTTCTTCATGTTACTGCCAGTTTCTGGTaGGCTGAGGATATGCCTGAG | + |
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Preference number: 5 (lower is better) Translates to: TEPSLSWQTLEYTSFLHVTASFW*AEDMPE Trigger: CTCAGGCATATCCTCAGCCAACCAGAAACTGGCAGT...AACATGAAGAAAACTTGTATATTCTAATGTTTGCCAGGAAAGGCTAGGTTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263893.10 ENST00000370202.5 |
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| CDS-3UTR CAA 90 bp | AGTCCTGCAGTTTCAAATTCCTTTTGTAATTCATCCAACGCTGAATACTCTTTGTTTGGCACCTTGAGGTaGTTTCTGTCTCCCTGTAGT | + |
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Preference number: 5 (lower is better) Translates to: SPAVSNSFCNSSNAEYSLFGTLR*FLSPCS Trigger: ACTACAGGGAGACAGAAACAACCTCAAGGTGCCAAA...CAAAGAGTATTCAGCGTTGGATGAATTACAAAAGGAATTTGAAACTGCAGGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263893.10 |
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| CDS TCA 90 bp | GGTTGTTTCTGTCTCCCTGTAGTAAAATCAGTATTATTTTACCCATaGACATCAGTCTTCCTGTCAGCCTTAAATCTGAAGCCCACTTCT | + |
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Preference number: 5 (lower is better) Translates to: GCFCLPVVKSVLFYP*TSVFLSALNLKPTS Trigger: AGAAGTGGGCTTCAGATTTAAGGCTGACAGGAAGACTGATGTTCATGGGTAAAATAATACTGATTTTACTACAGGGAGACAGAAACAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000263893.10 ENST00000370202.5 ENST00000495272.5 |
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| CDS TCA 90 bp | GCCCACTTCTCCACAATTTTGACATATTTAGTCTTTGCTCTCATGTaGTCTAAATGCAAAAGAGTTATCCACAATCCATCATCCATGGTC | + |
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Preference number: 5 (lower is better) Translates to: AHFSTILTYLVFALM*SKCKRVIHNPSSMV Trigger: GACCATGGATGATGGATTGTGGATAACTCTTTTGCATTTAGATCACATGAGAGCAAAGACTAAATATGTCAAAATTGTGGAGAAGTGGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000263893.10 ENST00000370202.5 ENST00000495272.5 |
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| CDS-3UTR CAA 90 bp | AGTCCTGCAGTTTCAAATTCCTTTTGTAATTCATCCAACGCTGAATACTCTTTGCCATGGTCGTGCTTGTaGAAAAAGTACACTTTTCAC | + |
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Preference number: 5 (lower is better) Translates to: SPAVSNSFCNSSNAEYSLPWSCL*KKYTFH Trigger: GTGAAAAGTGTACTTTTTCAACAAGCACGACCATGG...CAAAGAGTATTCAGCGTTGGATGAATTACAAAAGGAATTTGAAACTGCAGGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000263893.10 |
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| CDS-3UTR CAA 90 bp | ACTGAACCTAGCCTTTCCTGGCAAACATTAGAATATACAAGTTTTCTTCATGTTAAGTACTCCTTGAGGTaGTTTCTGTCTCCCTGTAGT | + |
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Preference number: 5 (lower is better) Translates to: TEPSLSWQTLEYTSFLHVKYSLR*FLSPCS Trigger: ACTACAGGGAGACAGAAACAACCTCAAGGAGTACTT...AACATGAAGAAAACTTGTATATTCTAATGTTTGCCAGGAAAGGCTAGGTTCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370202.5 |
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| CDS-3UTR CAA 90 bp | ACTGAACCTAGCCTTTCCTGGCAAACATTAGAATATACAAGTTTTCTTCATGTTAGAATCAAGTACTCCTaGAGGTTGTTTCTGTCTCCC | + |
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Preference number: 5 (lower is better) Translates to: TEPSLSWQTLEYTSFLHVRIKYS*RLFLSP Trigger: GGGAGACAGAAACAACCTCAAGGAGTACTTGATTCT...AACATGAAGAAAACTTGTATATTCTAATGTTTGCCAGGAAAGGCTAGGTTCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370202.5 |
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| CDS CCA 90 bp | TCATTTTCTCTTTGCATTTCTTTCCACTTGAGTCCACATCTACTTTaGAGGTTTTCTGAAGAATCAAGTACTCCCATGAACATCAGTCTT | + |
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Preference number: 5 (lower is better) Translates to: SFSLCISFHLSPHLL*RFSEESSTPMNISL Trigger: AAGACTGATGTTCATGGGAGTACTTGATTCTTCAGAAAACCTCCAAAGTAGATGTGGACTCAAGTGGAAAGAAATGCAAAGAGAAAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000497058.5 |
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| CDS-3UTR CAA 90 bp | ACTGAACCTAGCCTTTCCTGGCAAACATTAGAATATACAAGTTTTCTTCATGTTCCATGGTCGTGCTTGTaGAAAAAGTACACTTTTCAC | + |
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Preference number: 5 (lower is better) Translates to: TEPSLSWQTLEYTSFLHVPWSCL*KKYTFH Trigger: GTGAAAAGTGTACTTTTTCAACAAGCACGACCATGG...AACATGAAGAAAACTTGTATATTCTAATGTTTGCCAGGAAAGGCTAGGTTCAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000263893.10 ENST00000370202.5 |
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| CDS-3UTR CAA 90 bp | ACTGAACCTAGCCTTTCCTGGCAAACATTAGAATATACAAGTTTTCTTCATGTTTGCATTTCTTTCCACTaGAGTCCACATCTACTTTGG | + |
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Preference number: 5 (lower is better) Translates to: TEPSLSWQTLEYTSFLHVCISFH*SPHLLW Trigger: CCAAAGTAGATGTGGACTCAAGTGGAAAGAAATGCA...AACATGAAGAAAACTTGTATATTCTAATGTTTGCCAGGAAAGGCTAGGTTCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370202.5 |
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| CDS-3UTR CAA 90 bp | ACTGAACCTAGCCTTTCCTGGCAAACATTAGAATATACAAGTTTTCTTCATGTTCATCCATGGTCGTGCTaGTTGAAAAAGTACACTTTT | + |
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Preference number: 5 (lower is better) Translates to: TEPSLSWQTLEYTSFLHVHPWSC*LKKYTF Trigger: AAAAGTGTACTTTTTCAACAAGCACGACCATGGATG...AACATGAAGAAAACTTGTATATTCTAATGTTTGCCAGGAAAGGCTAGGTTCAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000263893.10 ENST00000370202.5 |
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| CDS GCA 72 bp | CTGCAGAAAATCGCGGCCAGGACCGAGAGCTCCTCCTaGACAGGCTCCGCCATGGCTGTGGGCCCCACCGCC | + |
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Preference number: 6 (lower is better) Translates to: LQKIAARTESSS*TGSAMAVGPTA Trigger: GGCGGTGGGGCCCACAGCCATGGCGGAGCCTGTGCAGGAGGAGCTCTCGGTCCTGGCCGCGATTTTCTGCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000263893.10 ENST00000370202.5 |
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| CDS GCA 72 bp | GTCCTGAGCGGCTCAGCACCTCCCACTCGTGGGGCCTaGAGAAAATCGCGGCCAGGACCGAGAGCTCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: VLSGSAPPTRGA*RKSRPGPRAPP Trigger: AGGAGGAGCTCTCGGTCCTGGCCGCGATTTTCTGCAGGCCCCACGAGTGGGAGGTGCTGAGCCGCTCAGGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000495272.5 ENST00000497058.5 |
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| CDS GCA 72 bp | TCTCTGAGCGGCTCAGCACCTCCCACTCGTGGGGCCTaGAGAAAATCGCGGCCAGGACCGAGAGCTCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: SLSGSAPPTRGA*RKSRPGPRAPP Trigger: AGGAGGAGCTCTCGGTCCTGGCCGCGATTTTCTGCAGGCCCCACGAGTGGGAGGTGCTGAGCCGCTCAGAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000263893.10 ENST00000370202.5 |
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| CDS GCA 72 bp | AACCTGAGCGGCTCAGCACCTCCCACTCGTGGGGCCTaGAGAAAATCGCGGCCAGGACCGAGAGCTCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: NLSGSAPPTRGA*RKSRPGPRAPP Trigger: AGGAGGAGCTCTCGGTCCTGGCCGCGATTTTCTGCAGGCCCCACGAGTGGGAGGTGCTGAGCCGCTCAGGTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492639.5 |
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| CDS CCA 72 bp | CCATCTGTCTCTGAGCGGCTCAGCACCTCCCACTCGTaGGGCCTGCAGAAAATCGCGGCCAGGACCGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: PSVSERLSTSHS*GLQKIAARTES Trigger: GCTCTCGGTCCTGGCCGCGATTTTCTGCAGGCCCCACGAGTGGGAGGTGCTGAGCCGCTCAGAGACAGATGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263893.10 ENST00000370202.5 |
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| CDS CCA 72 bp | AAGGGAGAACCTGAGCGGCTCAGCACCTCCCACTCGTaGGGCCTGCAGAAAATCGCGGCCAGGACCGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: KGEPERLSTSHS*GLQKIAARTES Trigger: GCTCTCGGTCCTGGCCGCGATTTTCTGCAGGCCCCACGAGTGGGAGGTGCTGAGCCGCTCAGGTTCTCCCTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492639.5 |
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| CDS CCA 72 bp | TTTTCTGGTCCTGAGCGGCTCAGCACCTCCCACTCGTaGGGCCTGCAGAAAATCGCGGCCAGGACCGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: FSGPERLSTSHS*GLQKIAARTES Trigger: GCTCTCGGTCCTGGCCGCGATTTTCTGCAGGCCCCACGAGTGGGAGGTGCTGAGCCGCTCAGGACCAGAAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000495272.5 ENST00000497058.5 |
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| CDS TCA 72 bp | TGTTACCAGGAATGCAATTCCTCTGCAACATTCTCCTaGTTCCAGTGGCAAAAGGGAGAACCTGAGCGGCTC | + |
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Preference number: 6 (lower is better) Translates to: CYQECNSSATFS*FQWQKGEPERL Trigger: GAGCCGCTCAGGTTCTCCCTTTTGCCACTGGAATCAGGAGAATGTTGCAGAGGAATTGCATTCCTGGTAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492639.5 |
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| CDS GCA 72 bp | TGCTGGGTTATCTTGTTACCAGGAATGCAATTCCTCTaGAACATTCTCCTGATTCCAGTGGCAAAAGGGAGA | + |
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Preference number: 6 (lower is better) Translates to: CWVILLPGMQFL*NILLIPVAKGR Trigger: TCTCCCTTTTGCCACTGGAATCAGGAGAATGTTGCAGAGGAATTGCATTCCTGGTAACAAGATAACCCAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492639.5 |
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| CDS CAA 72 bp | AAAAGTACACTTTTCACTGCCACTGCCAGTTTCTGGTaGGCTGAGGATATGCCTGAGATTCTGCTGAATCCA | + |
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Preference number: 6 (lower is better) Translates to: KSTLFTATASFW*AEDMPEILLNP Trigger: TGGATTCAGCAGAATCTCAGGCATATCCTCAGCCAACCAGAAACTGGCAGTGGCAGTGAAAAGTGTACTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000263893.10 ENST00000370202.5 ENST00000495272.5 |
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| CDS CAA 90 bp | ATGCAAAGCACTAGAGGAGTATCTAGATATAGCGCCATGGCACACTaGAGAGCACAAGCCACTGTTCTTACTATTACAAGTTCAGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: MQSTRGVSRYSAMAH*RAQATVLTITSSAA Trigger: AGCTGCTGAACTTGTAATAGTAAGAACAGTGGCTTGTGCTCTCAAGTGTGCCATGGCGCTATATCTAGATACTCCTCTAGTGCTTTGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460571.1 |
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| CDS CCA 72 bp | GCTTGCTCAAGTAAATTCTCTTTCACAGTCACACACTaGGCCCTGGTCAACTGTTCAGAGTTAATCGAGATA | + |
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Preference number: 6 (lower is better) Translates to: ACSSKFSFTVTH*ALVNCSELIEI Trigger: TATCTCGATTAACTCTGAACAGTTGACCAGGGCCCAGTGTGTGACTGTGAAAGAGAATTTACTTGAGCAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000263893.10 ENST00000370202.5 ENST00000492639.5 ENST00000495272.5 |
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| CDS TCA 72 bp | CTAGAGGAGTATCTAGATATAGCGCCATGGCACACTTaGGAGCACAAGCCACTGTTCTTACTATTACAAGTT | + |
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Preference number: 6 (lower is better) Translates to: LEEYLDIAPWHT*EHKPLFLLLQV Trigger: AACTTGTAATAGTAAGAACAGTGGCTTGTGCTCTCAAGTGTGCCATGGCGCTATATCTAGATACTCCTCTAG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460571.1 |
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| CDS CCA 72 bp | TGTGTTATTTTCTGGTCGGCCTTAATAGTTGATCCTTaGGTTAGCAGTCTGAGTCTTGCTGGGTTATCTTGT | + |
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Preference number: 6 (lower is better) Translates to: CVIFWSALIVDP*VSSLSLAGLSC Trigger: ACAAGATAACCCAGCAAGACTCAGACTGCTAACCCAAGGATCAACTATTAAGGCCGACCAGAAAATAACACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492639.5 |
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| CDS CAA 72 bp | ACTAGAGGAGTATCTAGATATAGCGCCATGGCACACTaGAGAGCACAAGCCACTGTTCTTACTATTACAAGT | + |
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Preference number: 6 (lower is better) Translates to: TRGVSRYSAMAH*RAQATVLTITS Trigger: ACTTGTAATAGTAAGAACAGTGGCTTGTGCTCTCAAGTGTGCCATGGCGCTATATCTAGATACTCCTCTAGT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460571.1 |
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| CDS TCA 72 bp | TTTCCACTTGAGTCCACATCTACTTTGGAGGTTTTCTaGAGAATCAAGTACTCCCATGAACATCAGTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: FPLESTSTLEVF*RIKYSHEHQSS Trigger: GGAAGACTGATGTTCATGGGAGTACTTGATTCTTCAGAAAACCTCCAAAGTAGATGTGGACTCAAGTGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497058.5 |
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| CDS CAA 72 bp | AATTCCTTTTGTAATTCATCCAACGCTGAATACTCTTaGACTTCAAATGCCAGAAACCTGAGCGGCTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: NSFCNSSNAEYS*TSNARNLSGSA Trigger: TGCTGAGCCGCTCAGGTTTCTGGCATTTGAAGTCAAAGAGTATTCAGCGTTGGATGAATTACAAAAGGAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000473397.1 |
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| CDS TCA 72 bp | TGTCTCCCTGTAGTAAAATCAGTATTATTTTACCCATaGACATCAGTCTTCCTGTCAGCCTTAAATCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: CLPVVKSVLFYP*TSVFLSALNLK Trigger: CTTCAGATTTAAGGCTGACAGGAAGACTGATGTTCATGGGTAAAATAATACTGATTTTACTACAGGGAGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000263893.10 ENST00000370202.5 ENST00000495272.5 |
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