RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RUVBL2 (Homo sapiens)

Ensembl gene IDs: ENSG00000183207

Ensembl transcript IDs: ENST00000221413.10, ENST00000593570.5, ENST00000594017.5, ENST00000594338.1, ENST00000595002.1, ENST00000595090.6, ENST00000595811.5, ENST00000596247.5, ENST00000596837.5, ENST00000598768.1, ENST00000601968.5

Found 346 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCACACCAAGCTGGCAGCTGTGATGAGCTGGATGGCGTAGCGCAGTaGCGTCTCCAGCCCGATGCGGGTCAGCACCGTGTAGGCGTCCTC +
Preference number: 1 (lower is better)
Translates to: AHQAGSCDELDGVAQ*RLQPDAGQHRVGVL
Trigger: GAGGACGCCTACACGGTGCTGACCCGCATCGGGCTGGAGACGTCACTGCGCTACGCCATCCAGCTCATCACAGCTGCCAGCTTGGTGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
3UTR CCA 90 bp GTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTaGTACTCCTTCATGTACTGCGTGGAGCGGGACTCGTCCAGGAAG +
Preference number: 1 (lower is better)
Translates to: VSMVSPLSSLKRKAS*YSFMYCVERDSSRK
Trigger: CTTCCTGGACGAGTCCCGCTCCACGCAGTACATGAAGGAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
3UTR TCA 90 bp GTACTCCTTCATGTACTGCGTGGAGCGGGACTCGTCCAGGAAGAGTaGGTAGACCCGCTTGATGTCATCCACCTGCACTTCTGTACCCTT +
Preference number: 1 (lower is better)
Translates to: VLLHVLRGAGLVQEE*VDPLDVIHLHFCTL
Trigger: AAGGGTACAGAAGTGCAGGTGGATGACATCAAGCGGGTCTACTCACTCTTCCTGGACGAGTCCCGCTCCACGCAGTACATGAAGGAGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
3UTR-3UTR GCA 90 bp CCTGCGCCATGCCCATGGCGATGGCCGTCTTCCCCGTGCCCGGCTGGCCAGCAAGACCGCCGGAAGGCCTaGGTCAGCGCCTCGGTCTTG +
Preference number: 2 (lower is better)
Translates to: PAPCPWRWPSSPCPAGQQDRRKA*VSASVL
Trigger: CAAGACCGAGGCGCTGACGCAGGCCTTCCGGCGGTC...TTGCTGGCCAGCCGGGCACGGGGAAGACGGCCATCGCCATGGGCATGGCGCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593570.5
ENST00000596247.5
3UTR-3UTR TCA 90 bp TCCTTGATGCGAACGCCGATGGACCGCCGGAAGGCCTGCGTCAGCGCCTCGGTCCGCCGTGCCGCCAGCTaGCCCACCATGCCTTGCGAA +
Preference number: 2 (lower is better)
Translates to: SLMRTPMDRRKACVSASVRRAAS*PTMPCE
Trigger: TTCGCAAGGCATGGTGGGTCAGCTGGCGGCACGGCG...GACCGAGGCGCTGACGCAGGCCTTCCGGCGGTCCATCGGCGTTCGCATCAAGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593570.5
ENST00000596247.5
3UTR-3UTR CCA 90 bp TCCTTGATGCGAACGCCGATGGACCGCCGGAAGGCCTGCGTCAGCGCCTCGGTCCCTGCGCCATGCCCATaGCGATGGCCGTCTTCCCCG +
Preference number: 2 (lower is better)
Translates to: SLMRTPMDRRKACVSASVPAPCP*RWPSSP
Trigger: CGGGGAAGACGGCCATCGCCATGGGCATGGCGCAGG...GACCGAGGCGCTGACGCAGGCCTTCCGGCGGTCCATCGGCGTTCGCATCAAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593570.5
ENST00000596247.5
3UTR-3UTR GCA 90 bp AAGATTTCACTGCCGGCGATGGCTGTGAATGGCGTGTCAGGGCCCAGGGCCTGCGCCAGCCGCCCGCCGTaGCGCCAGCTGACCCACCAT +
Preference number: 2 (lower is better)
Translates to: KISLPAMAVNGVSGPRACASRPP*RQLTHH
Trigger: ATGGTGGGTCAGCTGGCGGCACGGCGGGCGGCTGGC...GCAGGCCCTGGGCCCTGACACGCCATTCACAGCCATCGCCGGCAGTGAAATCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593570.5
ENST00000596247.5
3UTR-3UTR TCA 90 bp GCCCATAGCGTCGTAGTCGCGGGCGCGTGTGAAGGAGCGGCCCAGCTTGGAGATGATGGCGTAGCGCAGTaGCGTCTCCAGCCCGATGCG +
Preference number: 2 (lower is better)
Translates to: AHSVVVAGACEGAAQLGDDGVAQ*RLQPDA
Trigger: CGCATCGGGCTGGAGACGTCACTGCGCTACGCCATC...ATCTCCAAGCTGGGCCGCTCCTTCACACGCGCCCGCGACTACGACGCTATGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596247.5
3UTR-3UTR TCA 90 bp ATGCCCATGGCGATGGCCGTCTTCCCCGTGCCCGGCTGGCCAGCAATAAGGACTCGCCGTGCCGCCAGCTaGCCCACCATGCCTTGCGAA +
Preference number: 2 (lower is better)
Translates to: MPMAMAVFPVPGWPAIRTRRAAS*PTMPCE
Trigger: TTCGCAAGGCATGGTGGGTCAGCTGGCGGCACGGCG...AGTCCTTATTGCTGGCCAGCCGGGCACGGGGAAGACGGCCATCGCCATGGGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593570.5
ENST00000596247.5
3UTR-3UTR GCA 90 bp ATGCCCATGGCGATGGCCGTCTTCCCCGTGCCCGGCTGGCCAGCAATAAGGACTTCAGGGCCCAGGGCCTaGGCCATGCCCATGGCGATG +
Preference number: 2 (lower is better)
Translates to: MPMAMAVFPVPGWPAIRTSGPRA*AMPMAM
Trigger: CATCGCCATGGGCATGGCGCAGGCCCTGGGCCCTGA...AGTCCTTATTGCTGGCCAGCCGGGCACGGGGAAGACGGCCATCGCCATGGGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593570.5
ENST00000596247.5
3UTR-3UTR TCA 90 bp CCTGCGCCATGCCCATGGCGATGGCCGTCTTCCCCGTGCCCGGCTGGCCAGCAACAGCCACCTTGGCATTaGTCTGCTCACGGACTTCTG +
Preference number: 2 (lower is better)
Translates to: PAPCPWRWPSSPCPAGQQQPPWH*SAHGLL
Trigger: CAGAAGTCCGTGAGCAGATCAATGCCAAGGTGGCTG...TTGCTGGCCAGCCGGGCACGGGGAAGACGGCCATCGCCATGGGCATGGCGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596247.5
3UTR-3UTR GCA 90 bp TCCTTGATGCGAACGCCGATGGACCGCCGGAAGGCCTGCGTCAGCGCCTCGGTCGCCAGCAATAAGGACTaGCCGACCGGCAATCTTCCC +
Preference number: 2 (lower is better)
Translates to: SLMRTPMDRRKACVSASVASNKD*PTGNLP
Trigger: GGGAAGATTGCCGGTCGGGCAGTCCTTATTGCTGGC...GACCGAGGCGCTGACGCAGGCCTTCCGGCGGTCCATCGGCGTTCGCATCAAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593570.5
ENST00000596247.5
3UTR-3UTR GCA 90 bp AGGAAGGCGTCCTGGTACTCCTTCATGTACTGCGTGGAGCGGGACTCGTCCAGGGACCGCCGGAAGGCCTaGGTCAGCGCCTCGGTCTTG +
Preference number: 2 (lower is better)
Translates to: RKASWYSFMYCVERDSSRDRRKA*VSASVL
Trigger: CAAGACCGAGGCGCTGACGCAGGCCTTCCGGCGGTC...CCTGGACGAGTCCCGCTCCACGCAGTACATGAAGGAGTACCAGGACGCCTTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596247.5
3UTR-3UTR GCA 90 bp TCCTTGATGCGAACGCCGATGGACCGCCGGAAGGCCTGCGTCAGCGCCTCGGTCGGAGCCCGTCCCTGTTaGTGGTCGATCAATCTGGAT +
Preference number: 2 (lower is better)
Translates to: SLMRTPMDRRKACVSASVGARPC*WSINLD
Trigger: ATCCAGATTGATCGACCAGCAACAGGGACGGGCTCC...GACCGAGGCGCTGACGCAGGCCTTCCGGCGGTCCATCGGCGTTCGCATCAAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593570.5
ENST00000596247.5
3UTR-3UTR GCA 90 bp GCTGGATGGCGTAGCGCAGTGACGTCTCCAGCCCGATGCGGGTCAGCACCGTGTCCAGCTTGGAGATCTTaGCCGTCGCCTTGTCGATGG +
Preference number: 2 (lower is better)
Translates to: AGWRSAVTSPARCGSAPCPAWRS*PSPCRW
Trigger: CCATCGACAAGGCGACGGGCAAGATCTCCAAGCTGG...ACACGGTGCTGACCCGCATCGGGCTGGAGACGTCACTGCGCTACGCCATCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596247.5
3UTR-3UTR GCA 90 bp ATGCCCATGGCGATGGCCGTCTTCCCCGTGCCCGGCTGGCCAGCAATAAGGACTGAGTGGGCACCCCAGTaGTTGACTGTGAGCACCCCA +
Preference number: 2 (lower is better)
Translates to: MPMAMAVFPVPGWPAIRTEWAPQ*LTVSTP
Trigger: TGGGGTGCTCACAGTCAAGCACTGGGGTGCCCACTC...AGTCCTTATTGCTGGCCAGCCGGGCACGGGGAAGACGGCCATCGCCATGGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000593570.5
3UTR-3UTR CCA 90 bp CCCGATGCGGGTCAGCACCGTGTAGGCGTCCTCACTCATCTCCACATCTTCTTCCCTGCGCCATGCCCATaGCGATGGCCGTCTTCCCCG +
Preference number: 2 (lower is better)
Translates to: PDAGQHRVGVLTHLHIFFPAPCP*RWPSSP
Trigger: CGGGGAAGACGGCCATCGCCATGGGCATGGCGCAGG...GAAGAAGATGTGGAGATGAGTGAGGACGCCTACACGGTGCTGACCCGCATCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596247.5
3UTR-3UTR CCA 90 bp GATGCGAACGCCGATGGACCGCCGGAAGGCCTGCGTCAGCGCCTCGGTCTTGCTGCAGCTAGTCTCTACTaGGTCCTCAGCTCACAAGCG +
Preference number: 2 (lower is better)
Translates to: DANADGPPEGLRQRLGLAAASLY*VLSSQA
Trigger: CGCTTGTGAGCTGAGGACCCAGTAGAGACTAGCTGC...AGCAAGACCGAGGCGCTGACGCAGGCCTTCCGGCGGTCCATCGGCGTTCGCATC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593570.5
3UTR-3UTR TCA 90 bp CCGGATTCGCGTGATGCCACGGTTGGTGGCCATGATCAGGACAGGCGCCATGTCTCTCCAGGGCCCGGTTaGGGAAGGAGAAGCTCTCGA +
Preference number: 2 (lower is better)
Translates to: PDSRDATVGGHDQDRRHVSPGPG*GRRSSR
Trigger: TCGAGAGCTTCTCCTTCCTCAACCGGGCCCTGGAGA...GACATGGCGCCTGTCCTGATCATGGCCACCAACCGTGGCATCACGCGAATCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
3UTR-3UTR TCA 90 bp ACAGGCGCCATGTCACTCTCCAGGGCCCGGTTGAGGAAGGAGAAGCTCTCGATGTCGCCTTGTCGATGGTaGTCACGTCCCCGGCCTGGA +
Preference number: 2 (lower is better)
Translates to: TGAMSLSRARLRKEKLSMSPCRW*SRPRPG
Trigger: TCCAGGCCGGGGACGTGATCACCATCGACAAGGCGA...CATCGAGAGCTTCTCCTTCCTCAACCGGGCCCTGGAGAGTGACATGGCGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596247.5
3UTR-3UTR TCA 90 bp ACAGGCGCCATGTCACTCTCCAGGGCCCGGTTGAGGAAGGAGAAGCTCTCGATGCTCCCCTGTGTCACCTaGGAAGAGCGCCAGGAAGCC +
Preference number: 2 (lower is better)
Translates to: TGAMSLSRARLRKEKLSMLPCVT*EERQEA
Trigger: GGCTTCCTGGCGCTCTTCTCAGGTGACACAGGGGAG...CATCGAGAGCTTCTCCTTCCTCAACCGGGCCCTGGAGAGTGACATGGCGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596247.5
3UTR-3UTR GCA 90 bp GTGGACCTCGTCGATGAACAGCACTCCAGGGATGATCTCCGCCTTGCCCTCCTCACGTCTCCAGCCCGATaGGGGTCAGCACCGTGTAGG +
Preference number: 2 (lower is better)
Translates to: VDLVDEQHSRDDLRLALLTSPAR*GSAPCR
Trigger: CCTACACGGTGCTGACCCGCATCGGGCTGGAGACGT...GAGGAGGGCAAGGCGGAGATCATCCCTGGAGTGCTGTTCATCGACGAGGTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
3UTR-3UTR GCA 90 bp CCTGCGCCATGCCCATGGCGATGGCCGTCTTCCCCGTGCCCGGCTGGCCAGCAATCAGCTCACAAGCGGTaGTTGGCTCTTCATCCTTTT +
Preference number: 2 (lower is better)
Translates to: PAPCPWRWPSSPCPAGQQSAHKR*LALHPF
Trigger: AAAAGGATGAAGAGCCAAGCACCGCTTGTGAGCTGA...TTGCTGGCCAGCCGGGCACGGGGAAGACGGCCATCGCCATGGGCATGGCGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593570.5
3UTR-3UTR CCA 90 bp ACAGGCGCCATGTCACTCTCCAGGGCCCGGTTGAGGAAGGAGAAGCTCTCGATGTTCCCCGTGCCCGGCTaGCCAGCAATAAGGACTGCC +
Preference number: 2 (lower is better)
Translates to: TGAMSLSRARLRKEKLSMFPVPG*PAIRTA
Trigger: GGCAGTCCTTATTGCTGGCCAGCCGGGCACGGGGAA...CATCGAGAGCTTCTCCTTCCTCAACCGGGCCCTGGAGAGTGACATGGCGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596247.5
3UTR-3UTR CCA 90 bp TGTAGGCGTCCTCACTCATCTCCACATCTTCTTCCTCGCACCGGATGCGGAGGACCATGCCCATGGCGATaGCCGTCTTCCCCGTGCCCG +
Preference number: 2 (lower is better)
Translates to: CRRPHSSPHLLPRTGCGGPCPWR*PSSPCP
Trigger: CGGGCACGGGGAAGACGGCCATCGCCATGGGCATGG...TCCTCCGCATCCGGTGCGAGGAAGAAGATGTGGAGATGAGTGAGGACGCCTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596247.5
3UTR-3UTR TCA 90 bp AGGAAGGCGTCCTGGTACTCCTTCATGTACTGCGTGGAGCGGGACTCGTCCAGGACAGCACTCCAGGGATaGTCTCCGCCTTGCCCTCCT +
Preference number: 2 (lower is better)
Translates to: RKASWYSFMYCVERDSSRTALQG*SPPCPP
Trigger: AGGAGGGCAAGGCGGAGATCATCCCTGGAGTGCTGT...CCTGGACGAGTCCCGCTCCACGCAGTACATGAAGGAGTACCAGGACGCCTTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
3UTR-3UTR TCA 90 bp GTGGACCTCGTCGATGAACAGCACTCCAGGGATGATCTCCGCCTTGCCCTCCTCTCTCCAGGGCCCGGTTaGGGAAGGAGAAGCTCTCGA +
Preference number: 2 (lower is better)
Translates to: VDLVDEQHSRDDLRLALLSPGPG*GRRSSR
Trigger: TCGAGAGCTTCTCCTTCCTCAACCGGGCCCTGGAGA...GAGGAGGGCAAGGCGGAGATCATCCCTGGAGTGCTGTTCATCGACGAGGTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
3UTR-3UTR TCA 90 bp GCCCATAGCGTCGTAGTCGCGGGCGCGTGTGAAGGAGCGGCCCAGCTTGGAGATGTGAGTAGACCCGCTTaGTGTCATCCACCTGCACTT +
Preference number: 2 (lower is better)
Translates to: AHSVVVAGACEGAAQLGDVSRPA*CHPPAL
Trigger: AAGTGCAGGTGGATGACATCAAGCGGGTCTACTCAC...ATCTCCAAGCTGGGCCGCTCCTTCACACGCGCCCGCGACTACGACGCTATGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596247.5
3UTR-3UTR TCA 90 bp CGGATGTGGGAGTGGGCACCGATTCGCTCAATCCTTGTTACATCACGGATCTCCCGCCGTGCCGCCAGCTaGCCCACCATGCCTTGCGAA +
Preference number: 2 (lower is better)
Translates to: RMWEWAPIRSILVTSRISRRAAS*PTMPCE
Trigger: TTCGCAAGGCATGGTGGGTCAGCTGGCGGCACGGCG...GGAGATCCGTGATGTAACAAGGATTGAGCGAATCGGTGCCCACTCCCACATCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595811.5
3UTR-3UTR TCA 90 bp ACTCCAGGGATGATCTCCGCCTTGCCCTCCTCGCGCCACTCAGCCACCTTGGCACCATCTCTGTGGTCTTaGGGGTCAGTTTGCCCACCT +
Preference number: 2 (lower is better)
Translates to: TPGMISALPSSRHSATLAPSLWS*GSVCPP
Trigger: AGGTGGGCAAACTGACCCTCAAGACCACAGAGATGG...TGCCAAGGTGGCTGAGTGGCGCGAGGAGGGCAAGGCGGAGATCATCCCTGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596247.5
3UTR-3UTR TCA 90 bp ACTCCAGGGATGATCTCCGCCTTGCCCTCCTCGCGCCACTCAGCCACCTTGGCACACGGACTTCTGACTTaGTCTCCCCTGTGTCACCTG +
Preference number: 2 (lower is better)
Translates to: TPGMISALPSSRHSATLAHGLLT*SPLCHL
Trigger: CAGGTGACACAGGGGAGATCAAGTCAGAAGTCCGTG...TGCCAAGGTGGCTGAGTGGCGCGAGGAGGGCAAGGCGGAGATCATCCCTGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596247.5
3UTR-3UTR GCA 90 bp CACATCTTCTTCCTCGCACCGGATGCGGAGGATCTGCTTCGTGTCTTTCTCGCTCCAGGGCCTGCGCCATaGCCATGGCGATGGCCGTCT +
Preference number: 2 (lower is better)
Translates to: HIFFLAPDAEDLLRVFLAPGPAP*PWRWPS
Trigger: AGACGGCCATCGCCATGGGCATGGCGCAGGCCCTGG...AGCGAGAAAGACACGAAGCAGATCCTCCGCATCCGGTGCGAGGAAGAAGATGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596247.5
3UTR-3UTR GCA 90 bp CACATCTTCTTCCTCGCACCGGATGCGGAGGATCTGCTTCGTGTCTTTCTCGCTTCAGGGCCCAGGGCCTaGGCCATGCCCATGGCGATG +
Preference number: 2 (lower is better)
Translates to: HIFFLAPDAEDLLRVFLASGPRA*AMPMAM
Trigger: CATCGCCATGGGCATGGCGCAGGCCCTGGGCCCTGA...AGCGAGAAAGACACGAAGCAGATCCTCCGCATCCGGTGCGAGGAAGAAGATGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596247.5
3UTR-3UTR TCA 90 bp CCGGATTCGCGTGATGCCACGGTTGGTGGCCATGATCAGGACAGGCGCCATGTCCTGCTCACGGACTTCTaGCTTGATCTCCCCTGTGTC +
Preference number: 2 (lower is better)
Translates to: PDSRDATVGGHDQDRRHVLLTDF*LDLPCV
Trigger: GACACAGGGGAGATCAAGTCAGAAGTCCGTGAGCAG...GACATGGCGCCTGTCCTGATCATGGCCACCAACCGTGGCATCACGCGAATCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596247.5
3UTR-3UTR TCA 90 bp AGGAAGGCGTCCTGGTACTCCTTCATGTACTGCGTGGAGCGGGACTCGTCCAGGCAGCCACCTTGGCATTaGTCTGCTCACGGACTTCTG +
Preference number: 2 (lower is better)
Translates to: RKASWYSFMYCVERDSSRQPPWH*SAHGLL
Trigger: CAGAAGTCCGTGAGCAGATCAATGCCAAGGTGGCTG...CCTGGACGAGTCCCGCTCCACGCAGTACATGAAGGAGTACCAGGACGCCTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
3UTR-3UTR TCA 90 bp ATCCACCTGCACTTCTGTACCCTTGCGTTTCCGGCACACCAAGCTGGCAGCTGTCACGGTTGGTGGCCATaGTCAGGACAGGCGCCATGT +
Preference number: 2 (lower is better)
Translates to: IHLHFCTLAFPAHQAGSCHGWWP*SGQAPC
Trigger: ACATGGCGCCTGTCCTGATCATGGCCACCAACCGTG...ACAGCTGCCAGCTTGGTGTGCCGGAAACGCAAGGGTACAGAAGTGCAGGTGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
3UTR-3UTR GCA 90 bp ACTCCTTCATGTACTGCGTGGAGCGGGACTCGTCCAGGAAGAGTGAGTAGACCCGCAGGTCTATGGGGATaGCGTGAGGGCTCTGGTAGC +
Preference number: 2 (lower is better)
Translates to: TPSCTAWSGTRPGRVSRPAGLWG*REGSGS
Trigger: GCTACCAGAGCCCTCACGGCATCCCCATAGACCTGC...GGGTCTACTCACTCTTCCTGGACGAGTCCCGCTCCACGCAGTACATGAAGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
3UTR-3UTR GCA 90 bp GAGGAAGGCGTCCTGGTACTCCTTCATGTACTGCGTGGAGCGGGACTCGTCCAGCGGATGCGGAGGATCTaGTTCGTGTCTTTCTCGCTG +
Preference number: 2 (lower is better)
Translates to: EEGVLVLLHVLRGAGLVQRMRRI*FVSFSL
Trigger: CAGCGAGAAAGACACGAAGCAGATCCTCCGCATCCG...CTGGACGAGTCCCGCTCCACGCAGTACATGAAGGAGTACCAGGACGCCTTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
3UTR-3UTR CCA 90 bp AGGAAGGCGTCCTGGTACTCCTTCATGTACTGCGTGGAGCGGGACTCGTCCAGGGCTGGTCGATCAATCTaGATCTCCACCACCTCCCCT +
Preference number: 2 (lower is better)
Translates to: RKASWYSFMYCVERDSSRAGRSI*ISTTSP
Trigger: AGGGGAGGTGGTGGAGATCCAGATTGATCGACCAGC...CCTGGACGAGTCCCGCTCCACGCAGTACATGAAGGAGTACCAGGACGCCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596247.5
3UTR-3UTR GCA 90 bp ATCTCCAGGGAGAAGATTTCACTGCCGGCGATGGCTGTGAATGGCGTGTCAGGGGCCAGCAATAAGGACTaGCCGACCGGCAATCTTCCC +
Preference number: 2 (lower is better)
Translates to: ISREKISLPAMAVNGVSGASNKD*PTGNLP
Trigger: GGGAAGATTGCCGGTCGGGCAGTCCTTATTGCTGGC...CCCTGACACGCCATTCACAGCCATCGCCGGCAGTGAAATCTTCTCCCTGGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593570.5
ENST00000596247.5
3UTR-3UTR GCA 90 bp TGTAGGCGTCCTCACTCATCTCCACATCTTCTTCCTCGCACCGGATGCGGAGGATGCAGGGACACGGTGTaGACCACCTCCTTGCGTTTC +
Preference number: 2 (lower is better)
Translates to: CRRPHSSPHLLPRTGCGGCRDTV*TTSLRF
Trigger: GAAACGCAAGGAGGTGGTGCACACCGTGTCCCTGCA...TCCTCCGCATCCGGTGCGAGGAAGAAGATGTGGAGATGAGTGAGGACGCCTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596247.5
3UTR-3UTR CCA 90 bp ATGTGGGAGTGGGCACCGATTCGCTCAATCCTTGTTACATCACGGATCTCCGGGCTTTGTCGCCCAGGCTaGAATGCAGTGGCGCGATCT +
Preference number: 2 (lower is better)
Translates to: MWEWAPIRSILVTSRISGLCRPG*NAVARS
Trigger: AGATCGCGCCACTGCATTCCAGCCTGGGCGACAAAG...CCCGGAGATCCGTGATGTAACAAGGATTGAGCGAATCGGTGCCCACTCCCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595811.5
3UTR-3UTR CCA 90 bp GTGGGAGTGGGCACCGATTCGCTCAATCCTTGTTACATCACGGATCTCCGGGACAGCCTTCTGAGTAGCTaGGATTACAGGCCTGCACCA +
Preference number: 2 (lower is better)
Translates to: VGVGTDSLNPCYITDLRDSLLSS*DYRPAP
Trigger: TGGTGCAGGCCTGTAATCCCAGCTACTCAGAAGGCT...GTCCCGGAGATCCGTGATGTAACAAGGATTGAGCGAATCGGTGCCCACTCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595811.5
3UTR-3UTR GCA 90 bp AAGAGGAAGGCGTCCTGGTACTCCTTCATGTACTGCGTGGAGCGGGACTCGTCCACCTTGGCATTGATCTaGTCACGGACTTCTGACTTG +
Preference number: 2 (lower is better)
Translates to: KRKASWYSFMYCVERDSSTLALI*SRTSDL
Trigger: CAAGTCAGAAGTCCGTGAGCAGATCAATGCCAAGGT...GGACGAGTCCCGCTCCACGCAGTACATGAAGGAGTACCAGGACGCCTTCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
3UTR-3UTR GCA 90 bp ATGTGGGAGTGGGCACCGATTCGCTCAATCCTTGTTACATCACGGATCTCCGGGCACCACACCTGCCTGTaGTTCCAGCTTGGAACTCAA +
Preference number: 2 (lower is better)
Translates to: MWEWAPIRSILVTSRISGHHTCL*FQLGTQ
Trigger: TTGAGTTCCAAGCTGGAAGCACAGGCAGGTGTGGTG...CCCGGAGATCCGTGATGTAACAAGGATTGAGCGAATCGGTGCCCACTCCCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595811.5
3UTR-3UTR CCA 90 bp TGTAGGCGTCCTCACTCATCTCCACATCTTCTTCCTCGCACCGGATGCGGAGGAAAGAGGAAGGCGTCCTaGTACTCCTTCATGTACTGC +
Preference number: 2 (lower is better)
Translates to: CRRPHSSPHLLPRTGCGGKRKAS*YSFMYC
Trigger: GCAGTACATGAAGGAGTACCAGGACGCCTTCCTCTT...TCCTCCGCATCCGGTGCGAGGAAGAAGATGTGGAGATGAGTGAGGACGCCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
3UTR-3UTR CCA 90 bp CGGATGTGGGAGTGGGCACCGATTCGCTCAATCCTTGTTACATCACGGATCTCCCCTGTGCTTCCAGCTTaGAACTCAAGTGCCATTGGC +
Preference number: 2 (lower is better)
Translates to: RMWEWAPIRSILVTSRISPVLPA*NSSAIG
Trigger: GCCAATGGCACTTGAGTTCCAAGCTGGAAGCACAGG...GGAGATCCGTGATGTAACAAGGATTGAGCGAATCGGTGCCCACTCCCACATCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595811.5
3UTR-3UTR GCA 90 bp ATGTGGGAGTGGGCACCGATTCGCTCAATCCTTGTTACATCACGGATCTCCGGGTTCAAGCGATTCTCCTaGCTCAGCCTTCTGAGTAGC +
Preference number: 2 (lower is better)
Translates to: MWEWAPIRSILVTSRISGFKRFS*LSLLSS
Trigger: GCTACTCAGAAGGCTGAGGCAGGAGAATCGCTTGAA...CCCGGAGATCCGTGATGTAACAAGGATTGAGCGAATCGGTGCCCACTCCCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595811.5
3UTR-3UTR GCA 90 bp CTCAATCCTTGTTACATCACGGATCTCCGGGACTTTGGTTGTGGCTGTCTTTTTCTGCACCACCACACCTaGCTGTGCTTCCAGCTTGGA +
Preference number: 2 (lower is better)
Translates to: LNPCYITDLRDFGCGCLFLHHHT*LCFQLG
Trigger: TCCAAGCTGGAAGCACAGGCAGGTGTGGTGGTGCAG...AAAAAGACAGCCACAACCAAAGTCCCGGAGATCCGTGATGTAACAAGGATTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595811.5
3UTR-3UTR CAA 90 bp TTCACTGCCGGCGATGGCTGTGAATGGCGTGTCAGGGCCCAGGGCCTGCGCCATGGGATGATCTCCGCCTaGCCCTCCTCGCGCCACTCA +
Preference number: 3 (lower is better)
Translates to: FTAGDGCEWRVRAQGLRHGMISA*PSSRHS
Trigger: TGAGTGGCGCGAGGAGGGCAAGGCGGAGATCATCCC...ATGGCGCAGGCCCTGGGCCCTGACACGCCATTCACAGCCATCGCCGGCAGTGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596247.5
3UTR CCA 72 bp ATGCCCATGGCGATGGCCGTCTTCCCCGTGCCCGGCTaGCCAGCAATAAGGACTGCCCGACCGGCAATCTTC +
Preference number: 3 (lower is better)
Translates to: MPMAMAVFPVPG*PAIRTARPAIF
Trigger: GAAGATTGCCGGTCGGGCAGTCCTTATTGCTGGCCAGCCGGGCACGGGGAAGACGGCCATCGCCATGGGCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593570.5
ENST00000596247.5
3UTR TCA 72 bp GCTGGCAGCTGTGATGAGCTGGATGGCGTAGCGCAGTaGCGTCTCCAGCCCGATGCGGGTCAGCACCGTGTA +
Preference number: 3 (lower is better)
Translates to: AGSCDELDGVAQ*RLQPDAGQHRV
Trigger: TACACGGTGCTGACCCGCATCGGGCTGGAGACGTCACTGCGCTACGCCATCCAGCTCATCACAGCTGCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
3UTR GCA 72 bp GCTGGATGGCGTAGCGCAGTGACGTCTCCAGCCCGATaGGGGTCAGCACCGTGTAGGCGTCCTCACTCATCT +
Preference number: 3 (lower is better)
Translates to: AGWRSAVTSPAR*GSAPCRRPHSS
Trigger: AGATGAGTGAGGACGCCTACACGGTGCTGACCCGCATCGGGCTGGAGACGTCACTGCGCTACGCCATCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
3UTR CCA 72 bp CAGGGAGAAGATTTCACTGCCGGCGATGGCTGTGAATaGCGTGTCAGGGCCCAGGGCCTGCGCCATGCCCAT +
Preference number: 3 (lower is better)
Translates to: QGEDFTAGDGCE*RVRAQGLRHAH
Trigger: ATGGGCATGGCGCAGGCCCTGGGCCCTGACACGCCATTCACAGCCATCGCCGGCAGTGAAATCTTCTCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593570.5
ENST00000596247.5
3UTR-3UTR CAA 90 bp ATGCCCATGGCGATGGCCGTCTTCCCCGTGCCCGGCTGGCCAGCAATAAGGACTATCTCCGTCTCCTCCTaGATGCGAACGCCGATGGAC +
Preference number: 3 (lower is better)
Translates to: MPMAMAVFPVPGWPAIRTISVSS*MRTPMD
Trigger: GTCCATCGGCGTTCGCATCAAGGAGGAGACGGAGAT...AGTCCTTATTGCTGGCCAGCCGGGCACGGGGAAGACGGCCATCGCCATGGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593570.5
ENST00000596247.5
3UTR-3UTR CAA 90 bp GATTTCACTGCCGGCGATGGCTGTGAATGGCGTGTCAGGGCCCAGGGCCTGCGCTCAGCCACCTTGGCATaGATCTGCTCACGGACTTCT +
Preference number: 3 (lower is better)
Translates to: DFTAGDGCEWRVRAQGLRSATLA*ICSRTS
Trigger: AGAAGTCCGTGAGCAGATCAATGCCAAGGTGGCTGA...GCGCAGGCCCTGGGCCCTGACACGCCATTCACAGCCATCGCCGGCAGTGAAATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596247.5
3UTR-3UTR CAA 90 bp TCCTGGTACTCCTTCATGTACTGCGTGGAGCGGGACTCGTCCAGGAAGAGTGAGCTCTCCAGGGCCCGGTaGAGGAAGGAGAAGCTCTCG +
Preference number: 3 (lower is better)
Translates to: SWYSFMYCVERDSSRKSELSRAR*RKEKLS
Trigger: CGAGAGCTTCTCCTTCCTCAACCGGGCCCTGGAGAG...CTCACTCTTCCTGGACGAGTCCCGCTCCACGCAGTACATGAAGGAGTACCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
3UTR GCA 72 bp AAGCCCTGGGTGCGAGAGTTGATGACGTCGATCTCGTaGAGGGACACGGTGTGCACCACCTCCTTGCGTTTC +
Preference number: 3 (lower is better)
Translates to: KPWVRELMTSIS*RDTVCTTSLRF
Trigger: GAAACGCAAGGAGGTGGTGCACACCGTGTCCCTGCACGAGATCGACGTCATCAACTCTCGCACCCAGGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596247.5
3UTR-3UTR CAA 90 bp AAGAGGAAGGCGTCCTGGTACTCCTTCATGTACTGCGTGGAGCGGGACTCGTCCTCCATCTCTGTGGTCTaGAGGGTCAGTTTGCCCACC +
Preference number: 3 (lower is better)
Translates to: KRKASWYSFMYCVERDSSSISVV*RVSLPT
Trigger: GGTGGGCAAACTGACCCTCAAGACCACAGAGATGGA...GGACGAGTCCCGCTCCACGCAGTACATGAAGGAGTACCAGGACGCCTTCCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596247.5
3UTR CCA 72 bp AGAGGAAGGCGTCCTGGTACTCCTTCATGTACTGCGTaGAGCGGGACTCGTCCAGGAAGAGTGAGTAGACCC +
Preference number: 3 (lower is better)
Translates to: RGRRPGTPSCTA*SGTRPGRVSRP
Trigger: GGGTCTACTCACTCTTCCTGGACGAGTCCCGCTCCACGCAGTACATGAAGGAGTACCAGGACGCCTTCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
3UTR-3UTR CAA 90 bp AAGGCGTCCTGGTACTCCTTCATGTACTGCGTGGAGCGGGACTCGTCCAGGAAGTCAGCCACCTTGGCATaGATCTGCTCACGGACTTCT +
Preference number: 3 (lower is better)
Translates to: KASWYSFMYCVERDSSRKSATLA*ICSRTS
Trigger: AGAAGTCCGTGAGCAGATCAATGCCAAGGTGGCTGA...CTTCCTGGACGAGTCCCGCTCCACGCAGTACATGAAGGAGTACCAGGACGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
3UTR TCA 72 bp CATGTACTGCGTGGAGCGGGACTCGTCCAGGAAGAGTaGGTAGACCCGCTTGATGTCATCCACCTGCACTTC +
Preference number: 3 (lower is better)
Translates to: HVLRGAGLVQEE*VDPLDVIHLHF
Trigger: GAAGTGCAGGTGGATGACATCAAGCGGGTCTACTCACTCTTCCTGGACGAGTCCCGCTCCACGCAGTACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
3UTR CCA 72 bp GTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTaGTACTCCTTCATGTACTGCGTGGAGCGGGACTCG +
Preference number: 3 (lower is better)
Translates to: VSPLSSLKRKAS*YSFMYCVERDS
Trigger: CGAGTCCCGCTCCACGCAGTACATGAAGGAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
3UTR-3UTR CAA 90 bp ATGTGGGAGTGGGCACCGATTCGCTCAATCCTTGTTACATCACGGATCTCCGGGGCCTGTGCTTCCAGCTaGGAACTCAAGTGCCATTGG +
Preference number: 3 (lower is better)
Translates to: MWEWAPIRSILVTSRISGACASS*ELKCHW
Trigger: CCAATGGCACTTGAGTTCCAAGCTGGAAGCACAGGC...CCCGGAGATCCGTGATGTAACAAGGATTGAGCGAATCGGTGCCCACTCCCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595811.5
CDS-3UTR GCA 90 bp CTGCCGGCGATGGCTGTGAATGGCGTGTCAGGGCCCAGGGCCTGCGCCATGCCCGCCAGCCGCCCGCCGTaGCGCCAGCTGACCCACCAT +
Preference number: 4 (lower is better)
Translates to: LPAMAVNGVSGPRACAMPASRPP*RQLTHH
Trigger: ATGGTGGGTCAGCTGGCGGCACGGCGGGCGGCTGGC...GGGCATGGCGCAGGCCCTGGGCCCTGACACGCCATTCACAGCCATCGCCGGCAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593570.5
ENST00000596247.5
CDS-3UTR TCA 90 bp GATGGCCGTCTTCCCCGTGCCCGGCTGGCCAGCAATAAGGACTGCCCGACCGGCCGCCGTGCCGCCAGCTaGCCCACCATGCCTTGCGAA +
Preference number: 4 (lower is better)
Translates to: DGRLPRARLASNKDCPTGRRAAS*PTMPCE
Trigger: TTCGCAAGGCATGGTGGGTCAGCTGGCGGCACGGCG...GCCGGTCGGGCAGTCCTTATTGCTGGCCAGCCGGGCACGGGGAAGACGGCCATC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593570.5
ENST00000596247.5
CDS-3UTR GCA 90 bp GATGGCCGTCTTCCCCGTGCCCGGCTGGCCAGCAATAAGGACTGCCCGACCGGCGACCGCCGGAAGGCCTaGGTCAGCGCCTCGGTCTTG +
Preference number: 4 (lower is better)
Translates to: DGRLPRARLASNKDCPTGDRRKA*VSASVL
Trigger: CAAGACCGAGGCGCTGACGCAGGCCTTCCGGCGGTC...GCCGGTCGGGCAGTCCTTATTGCTGGCCAGCCGGGCACGGGGAAGACGGCCATC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593570.5
ENST00000596247.5
CDS-3UTR GCA 90 bp TGTGAATGGCGTGTCAGGGCCCAGGGCCTGCGCCATGCCCATGGCGATGGCCGTTCAGGGCCCAGGGCCTaGGCCATGCCCATGGCGATG +
Preference number: 4 (lower is better)
Translates to: CEWRVRAQGLRHAHGDGRSGPRA*AMPMAM
Trigger: CATCGCCATGGGCATGGCGCAGGCCCTGGGCCCTGA...ACGGCCATCGCCATGGGCATGGCGCAGGCCCTGGGCCCTGACACGCCATTCACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593570.5
ENST00000596247.5
CDS-3UTR CCA 90 bp GATGCGAACGCCGATGGACCGCCGGAAGGCCTGCGTCAGCGCCTCGGTCTTGCTCCTGCGCCATGCCCATaGCGATGGCCGTCTTCCCCG +
Preference number: 4 (lower is better)
Translates to: DANADGPPEGLRQRLGLAPAPCP*RWPSSP
Trigger: CGGGGAAGACGGCCATCGCCATGGGCATGGCGCAGG...AGCAAGACCGAGGCGCTGACGCAGGCCTTCCGGCGGTCCATCGGCGTTCGCATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593570.5
ENST00000596247.5
CDS-3UTR TCA 90 bp GATGCGAACGCCGATGGACCGCCGGAAGGCCTGCGTCAGCGCCTCGGTCTTGCTTGCCGGCGATGGCTGTaGATGGCGTGTCAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: DANADGPPEGLRQRLGLACRRWL*MACQGP
Trigger: TGGGCCCTGACACGCCATTCACAGCCATCGCCGGCA...AGCAAGACCGAGGCGCTGACGCAGGCCTTCCGGCGGTCCATCGGCGTTCGCATC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593570.5
ENST00000596247.5
CDS-3UTR GCA 90 bp GTGAGGGCTCTGGTAGCTGGTGCCCCGGATTCGCGTGATGCCACGGTTGGTGGCCCAGGGCCTGCGCCATaGCCATGGCGATGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: VRALVAGAPDSRDATVGGPGPAP*PWRWPS
Trigger: AGACGGCCATCGCCATGGGCATGGCGCAGGCCCTGG...GCCACCAACCGTGGCATCACGCGAATCCGGGGCACCAGCTACCAGAGCCCTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR TCA 90 bp GTCGATGAACAGCACTCCAGGGATGATCTCCGCCTTGCCCTCCTCGCGCCACTCAGTCGCGGGCGCGTGTaGAGGAGCGGCCCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: VDEQHSRDDLRLALLAPLSRGRV*RSGPAW
Trigger: CCAAGCTGGGCCGCTCCTTCACACGCGCCCGCGACT...GAGTGGCGCGAGGAGGGCAAGGCGGAGATCATCCCTGGAGTGCTGTTCATCGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR TCA 90 bp CTCGTCGATGAACAGCACTCCAGGGATGATCTCCGCCTTGCCCTCCTCGCGCCAAGTCGCGGGCGCGTGTaGAGGAGCGGCCCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: LVDEQHSRDDLRLALLAPSRGRV*RSGPAW
Trigger: CCAAGCTGGGCCGCTCCTTCACACGCGCCCGCGACT...TGGCGCGAGGAGGGCAAGGCGGAGATCATCCCTGGAGTGCTGTTCATCGACGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR GCA 90 bp GATGGCCGTCTTCCCCGTGCCCGGCTGGCCAGCAATAAGGACTGCCCGACCGGCGAGTGGGCACCCCAGTaGTTGACTGTGAGCACCCCA +
Preference number: 4 (lower is better)
Translates to: DGRLPRARLASNKDCPTGEWAPQ*LTVSTP
Trigger: TGGGGTGCTCACAGTCAAGCACTGGGGTGCCCACTC...GCCGGTCGGGCAGTCCTTATTGCTGGCCAGCCGGGCACGGGGAAGACGGCCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000593570.5
CDS-3UTR CCA 90 bp GCCCATGGCGATGGCCGTCTTCCCCGTGCCCGGCTGGCCAGCAATAAGGACTGCTTCCCCGTGCCCGGCTaGCCAGCAATAAGGACTGCC +
Preference number: 4 (lower is better)
Translates to: AHGDGRLPRARLASNKDCFPVPG*PAIRTA
Trigger: GGCAGTCCTTATTGCTGGCCAGCCGGGCACGGGGAA...GCAGTCCTTATTGCTGGCCAGCCGGGCACGGGGAAGACGGCCATCGCCATGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593570.5
ENST00000596247.5
CDS-3UTR CCA 90 bp TGTGAATGGCGTGTCAGGGCCCAGGGCCTGCGCCATGCCCATGGCGATGGCCGTAGGAGCGGCCCAGCTTaGAGATCTTGCCCGTCGCCT +
Preference number: 4 (lower is better)
Translates to: CEWRVRAQGLRHAHGDGRRSGPA*RSCPSP
Trigger: AGGCGACGGGCAAGATCTCCAAGCTGGGCCGCTCCT...ACGGCCATCGCCATGGGCATGGCGCAGGCCCTGGGCCCTGACACGCCATTCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596247.5
CDS-3UTR CCA 90 bp GATGCGAACGCCGATGGACCGCCGGAAGGCCTGCGTCAGCGCCTCGGTCTTGCTCCCCGGATGTGGGAGTaGGCACCCCAGTGCTTGACT +
Preference number: 4 (lower is better)
Translates to: DANADGPPEGLRQRLGLAPRMWE*APQCLT
Trigger: AGTCAAGCACTGGGGTGCCCACTCCCACATCCGGGG...AGCAAGACCGAGGCGCTGACGCAGGCCTTCCGGCGGTCCATCGGCGTTCGCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593570.5
CDS-3UTR TCA 90 bp GACCTCGTCGATGAACAGCACTCCAGGGATGATCTCCGCCTTGCCCTCCTCGCGCGCCGTGCCGCCAGCTaGCCCACCATGCCTTGCGAA +
Preference number: 4 (lower is better)
Translates to: DLVDEQHSRDDLRLALLARRAAS*PTMPCE
Trigger: TTCGCAAGGCATGGTGGGTCAGCTGGCGGCACGGCG...CGCGAGGAGGGCAAGGCGGAGATCATCCCTGGAGTGCTGTTCATCGACGAGGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR TCA 90 bp AGCGCAGTGACGTCTCCAGCCCGATGCGGGTCAGCACCGTGTAGGCGTCCTCACCTCCCCTGTGTCACCTaGGAAGAGCGCCAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: SAVTSPARCGSAPCRRPHLPCVT*EERQEA
Trigger: GGCTTCCTGGCGCTCTTCTCAGGTGACACAGGGGAG...GTGAGGACGCCTACACGGTGCTGACCCGCATCGGGCTGGAGACGTCACTGCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR TCA 90 bp CTGCCGGCGATGGCTGTGAATGGCGTGTCAGGGCCCAGGGCCTGCGCCATGCCCCAGCCACCTTGGCATTaGTCTGCTCACGGACTTCTG +
Preference number: 4 (lower is better)
Translates to: LPAMAVNGVSGPRACAMPQPPWH*SAHGLL
Trigger: CAGAAGTCCGTGAGCAGATCAATGCCAAGGTGGCTG...GGGCATGGCGCAGGCCCTGGGCCCTGACACGCCATTCACAGCCATCGCCGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596247.5
CDS-3UTR GCA 90 bp ATGGCGTGTCAGGGCCCAGGGCCTGCGCCATGCCCATGGCGATGGCCGTCTTCCGCCAGCAATAAGGACTaGCCGACCGGCAATCTTCCC +
Preference number: 4 (lower is better)
Translates to: MACQGPGPAPCPWRWPSSASNKD*PTGNLP
Trigger: GGGAAGATTGCCGGTCGGGCAGTCCTTATTGCTGGC...GGAAGACGGCCATCGCCATGGGCATGGCGCAGGCCCTGGGCCCTGACACGCCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593570.5
ENST00000596247.5
CDS-3UTR GCA 90 bp AAGATTTCACTGCCGGCGATGGCTGTGAATGGCGTGTCAGGGCCCAGGGCCTGCCCAGGGCCTGCGCCATaGCCATGGCGATGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: KISLPAMAVNGVSGPRACPGPAP*PWRWPS
Trigger: AGACGGCCATCGCCATGGGCATGGCGCAGGCCCTGG...GCAGGCCCTGGGCCCTGACACGCCATTCACAGCCATCGCCGGCAGTGAAATCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593570.5
ENST00000596247.5
CDS-3UTR GCA 90 bp CTCCAGCCCGATGCGGGTCAGCACCGTGTAGGCGTCCTCACTCATCTCCACATCTCAGGGCCCAGGGCCTaGGCCATGCCCATGGCGATG +
Preference number: 4 (lower is better)
Translates to: LQPDAGQHRVGVLTHLHISGPRA*AMPMAM
Trigger: CATCGCCATGGGCATGGCGCAGGCCCTGGGCCCTGA...GATGTGGAGATGAGTGAGGACGCCTACACGGTGCTGACCCGCATCGGGCTGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR GCA 90 bp CTTGCCCGTCGCCTTGTCGATGGTGATCACGTCCCCGGCCTGGACCTTGTCCTTTCAGGGCCCAGGGCCTaGGCCATGCCCATGGCGATG +
Preference number: 4 (lower is better)
Translates to: LARRLVDGDHVPGLDLVLSGPRA*AMPMAM
Trigger: CATCGCCATGGGCATGGCGCAGGCCCTGGGCCCTGA...AAGGACAAGGTCCAGGCCGGGGACGTGATCACCATCGACAAGGCGACGGGCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596247.5
CDS-3UTR CCA 90 bp GATTTCACTGCCGGCGATGGCTGTGAATGGCGTGTCAGGGCCCAGGGCCTGCGCTTCCCCGTGCCCGGCTaGCCAGCAATAAGGACTGCC +
Preference number: 4 (lower is better)
Translates to: DFTAGDGCEWRVRAQGLRFPVPG*PAIRTA
Trigger: GGCAGTCCTTATTGCTGGCCAGCCGGGCACGGGGAA...GCGCAGGCCCTGGGCCCTGACACGCCATTCACAGCCATCGCCGGCAGTGAAATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593570.5
ENST00000596247.5
CDS-3UTR CCA 90 bp CCGGATTCGCGTGATGCCACGGTTGGTGGCCATGATCAGGACAGGCGCCATGTCCCTGCGCCATGCCCATaGCGATGGCCGTCTTCCCCG +
Preference number: 4 (lower is better)
Translates to: PDSRDATVGGHDQDRRHVPAPCP*RWPSSP
Trigger: CGGGGAAGACGGCCATCGCCATGGGCATGGCGCAGG...GACATGGCGCCTGTCCTGATCATGGCCACCAACCGTGGCATCACGCGAATCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CCA 90 bp GATGGCCGTCTTCCCCGTGCCCGGCTGGCCAGCAATAAGGACTGCCCGACCGGCTCAGTTTGCCCACCTTaGAGCCCGTCCCTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: DGRLPRARLASNKDCPTGSVCPP*SPSLLL
Trigger: CAGCAACAGGGACGGGCTCCAAGGTGGGCAAACTGA...GCCGGTCGGGCAGTCCTTATTGCTGGCCAGCCGGGCACGGGGAAGACGGCCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593570.5
ENST00000596247.5
CDS-3UTR TCA 90 bp AGCGCAGTGACGTCTCCAGCCCGATGCGGGTCAGCACCGTGTAGGCGTCCTCACCACGGTTGGTGGCCATaGTCAGGACAGGCGCCATGT +
Preference number: 4 (lower is better)
Translates to: SAVTSPARCGSAPCRRPHHGWWP*SGQAPC
Trigger: ACATGGCGCCTGTCCTGATCATGGCCACCAACCGTG...GTGAGGACGCCTACACGGTGCTGACCCGCATCGGGCTGGAGACGTCACTGCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR TCA 90 bp CCGGATTCGCGTGATGCCACGGTTGGTGGCCATGATCAGGACAGGCGCCATGTCGATGGCGTAGCGCAGTaGCGTCTCCAGCCCGATGCG +
Preference number: 4 (lower is better)
Translates to: PDSRDATVGGHDQDRRHVDGVAQ*RLQPDA
Trigger: CGCATCGGGCTGGAGACGTCACTGCGCTACGCCATC...GACATGGCGCCTGTCCTGATCATGGCCACCAACCGTGGCATCACGCGAATCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR GCA 90 bp ATCCACCTGCACTTCTGTACCCTTGCGTTTCCGGCACACCAAGCTGGCAGCTGTGCCAGCCGCCCGCCGTaGCGCCAGCTGACCCACCAT +
Preference number: 4 (lower is better)
Translates to: IHLHFCTLAFPAHQAGSCASRPP*RQLTHH
Trigger: ATGGTGGGTCAGCTGGCGGCACGGCGGGCGGCTGGC...ACAGCTGCCAGCTTGGTGTGCCGGAAACGCAAGGGTACAGAAGTGCAGGTGGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR GCA 90 bp GTGGGAGTGGGCACCGATTCGCTCAATCCTTGTTACATCACGGATCTCCGGGACGCCAGCCGCCCGCCGTaGCGCCAGCTGACCCACCAT +
Preference number: 4 (lower is better)
Translates to: VGVGTDSLNPCYITDLRDASRPP*RQLTHH
Trigger: ATGGTGGGTCAGCTGGCGGCACGGCGGGCGGCTGGC...GTCCCGGAGATCCGTGATGTAACAAGGATTGAGCGAATCGGTGCCCACTCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595811.5
CDS-3UTR GCA 90 bp ACTCCTTCATGTACTGCGTGGAGCGGGACTCGTCCAGGAAGAGTGAGTAGACCCGCCAGCCGCCCGCCGTaGCGCCAGCTGACCCACCAT +
Preference number: 4 (lower is better)
Translates to: TPSCTAWSGTRPGRVSRPASRPP*RQLTHH
Trigger: ATGGTGGGTCAGCTGGCGGCACGGCGGGCGGCTGGC...GGGTCTACTCACTCTTCCTGGACGAGTCCCGCTCCACGCAGTACATGAAGGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR GCA 90 bp CAGGGAGAAGATTTCACTGCCGGCGATGGCTGTGAATGGCGTGTCAGGGCCCAGCCAGGGCCTGCGCCATaGCCATGGCGATGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: QGEDFTAGDGCEWRVRAQPGPAP*PWRWPS
Trigger: AGACGGCCATCGCCATGGGCATGGCGCAGGCCCTGG...CTGGGCCCTGACACGCCATTCACAGCCATCGCCGGCAGTGAAATCTTCTCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593570.5
ENST00000596247.5
CDS-3UTR CCA 90 bp GCCCCGGATTCGCGTGATGCCACGGTTGGTGGCCATGATCAGGACAGGCGCCATTTCCCCGTGCCCGGCTaGCCAGCAATAAGGACTGCC +
Preference number: 4 (lower is better)
Translates to: APDSRDATVGGHDQDRRHFPVPG*PAIRTA
Trigger: GGCAGTCCTTATTGCTGGCCAGCCGGGCACGGGGAA...ATGGCGCCTGTCCTGATCATGGCCACCAACCGTGGCATCACGCGAATCCGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CCA 90 bp CTCCTGGGTGCAGCTAGTCTCTACTGGGTCCTCAGCTCACAAGCGGTGCTTGGCCCATGCCCATGGCGATaGCCGTCTTCCCCGTGCCCG +
Preference number: 4 (lower is better)
Translates to: LLGAASLYWVLSSQAVLGPCPWR*PSSPCP
Trigger: CGGGCACGGGGAAGACGGCCATCGCCATGGGCATGG...GCCAAGCACCGCTTGTGAGCTGAGGACCCAGTAGAGACTAGCTGCACCCAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593570.5
CDS-3UTR CCA 90 bp GATGGCCGTCTTCCCCGTGCCCGGCTGGCCAGCAATAAGGACTGCCCGACCGGCGCCCGTCCCTGTTGCTaGTCGATCAATCTGGATCTC +
Preference number: 4 (lower is better)
Translates to: DGRLPRARLASNKDCPTGARPCC*SINLDL
Trigger: GAGATCCAGATTGATCGACCAGCAACAGGGACGGGC...GCCGGTCGGGCAGTCCTTATTGCTGGCCAGCCGGGCACGGGGAAGACGGCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593570.5
ENST00000596247.5
CDS-3UTR TCA 90 bp AAGGCGTCCTGGTACTCCTTCATGTACTGCGTGGAGCGGGACTCGTCCAGGAAGCGCCGTGCCGCCAGCTaGCCCACCATGCCTTGCGAA +
Preference number: 4 (lower is better)
Translates to: KASWYSFMYCVERDSSRKRRAAS*PTMPCE
Trigger: TTCGCAAGGCATGGTGGGTCAGCTGGCGGCACGGCG...CTTCCTGGACGAGTCCCGCTCCACGCAGTACATGAAGGAGTACCAGGACGCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR TCA 90 bp GTGGACCTCGTCGATGAACAGCACTCCAGGGATGATCTCCGCCTTGCCCTCCTCTGCCGGCGATGGCTGTaGATGGCGTGTCAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: VDLVDEQHSRDDLRLALLCRRWL*MACQGP
Trigger: TGGGCCCTGACACGCCATTCACAGCCATCGCCGGCA...GAGGAGGGCAAGGCGGAGATCATCCCTGGAGTGCTGTTCATCGACGAGGTCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR TCA 90 bp CAGGGAGAAGATTTCACTGCCGGCGATGGCTGTGAATGGCGTGTCAGGGCCCAGTGCCGGCGATGGCTGTaGATGGCGTGTCAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: QGEDFTAGDGCEWRVRAQCRRWL*MACQGP
Trigger: TGGGCCCTGACACGCCATTCACAGCCATCGCCGGCA...CTGGGCCCTGACACGCCATTCACAGCCATCGCCGGCAGTGAAATCTTCTCCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593570.5
ENST00000596247.5
CDS-3UTR TCA 90 bp GCCCCGGATTCGCGTGATGCCACGGTTGGTGGCCATGATCAGGACAGGCGCCATTCTCCAGGGCCCGGTTaGGGAAGGAGAAGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: APDSRDATVGGHDQDRRHSPGPG*GRRSSR
Trigger: TCGAGAGCTTCTCCTTCCTCAACCGGGCCCTGGAGA...ATGGCGCCTGTCCTGATCATGGCCACCAACCGTGGCATCACGCGAATCCGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR TCA 90 bp CAGGTCTATGGGGATGCCGTGAGGGCTCTGGTAGCTGGTGCCCCGGATTCGCGTCACGGTTGGTGGCCATaGTCAGGACAGGCGCCATGT +
Preference number: 4 (lower is better)
Translates to: QVYGDAVRALVAGAPDSRHGWWP*SGQAPC
Trigger: ACATGGCGCCTGTCCTGATCATGGCCACCAACCGTG...ACGCGAATCCGGGGCACCAGCTACCAGAGCCCTCACGGCATCCCCATAGACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR TCA 90 bp AGGGATGATCTCCGCCTTGCCCTCCTCGCGCCACTCAGCCACCTTGGCATTGATGATGGCGTAGCGCAGTaGCGTCTCCAGCCCGATGCG +
Preference number: 4 (lower is better)
Translates to: RDDLRLALLAPLSHLGIDDGVAQ*RLQPDA
Trigger: CGCATCGGGCTGGAGACGTCACTGCGCTACGCCATC...ATCAATGCCAAGGTGGCTGAGTGGCGCGAGGAGGGCAAGGCGGAGATCATCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR GCA 90 bp GGAGGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTAGCCAGCCGCCCGCCGTaGCGCCAGCTGACCCACCAT +
Preference number: 4 (lower is better)
Translates to: GGVHGLAFEFVEEEGVLVASRPP*RQLTHH
Trigger: ATGGTGGGTCAGCTGGCGGCACGGCGGGCGGCTGGC...TACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR GCA 90 bp CCCGATGCGGGTCAGCACCGTGTAGGCGTCCTCACTCATCTCCACATCTTCTTCGACCGCCGGAAGGCCTaGGTCAGCGCCTCGGTCTTG +
Preference number: 4 (lower is better)
Translates to: PDAGQHRVGVLTHLHIFFDRRKA*VSASVL
Trigger: CAAGACCGAGGCGCTGACGCAGGCCTTCCGGCGGTC...GAAGAAGATGTGGAGATGAGTGAGGACGCCTACACGGTGCTGACCCGCATCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR GCA 90 bp GATGCGAACGCCGATGGACCGCCGGAAGGCCTGCGTCAGCGCCTCGGTCTTGCTGGAGCCCGTCCCTGTTaGTGGTCGATCAATCTGGAT +
Preference number: 4 (lower is better)
Translates to: DANADGPPEGLRQRLGLAGARPC*WSINLD
Trigger: ATCCAGATTGATCGACCAGCAACAGGGACGGGCTCC...AGCAAGACCGAGGCGCTGACGCAGGCCTTCCGGCGGTCCATCGGCGTTCGCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593570.5
ENST00000596247.5
CDS-3UTR GCA 90 bp AGCGCAGTGACGTCTCCAGCCCGATGCGGGTCAGCACCGTGTAGGCGTCCTCACTGCAGGGACACGGTGTaGACCACCTCCTTGCGTTTC +
Preference number: 4 (lower is better)
Translates to: SAVTSPARCGSAPCRRPHCRDTV*TTSLRF
Trigger: GAAACGCAAGGAGGTGGTGCACACCGTGTCCCTGCA...GTGAGGACGCCTACACGGTGCTGACCCGCATCGGGCTGGAGACGTCACTGCGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR GCA 90 bp GCCCATAGCGTCGTAGTCGCGGGCGCGTGTGAAGGAGCGGCCCAGCTTGGAGATATGACGTCGATCTCGTaGAGGGACACGGTGTGCACC +
Preference number: 4 (lower is better)
Translates to: AHSVVVAGACEGAAQLGDMTSIS*RDTVCT
Trigger: GGTGCACACCGTGTCCCTGCACGAGATCGACGTCAT...ATCTCCAAGCTGGGCCGCTCCTTCACACGCGCCCGCGACTACGACGCTATGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596247.5
CDS-3UTR GCA 90 bp GTAGGGGGTGGTGGAGACGATAAGCAGCCGGTCCAGCAGGTCTATGGGGATGCCACGTCTCCAGCCCGATaGGGGTCAGCACCGTGTAGG +
Preference number: 4 (lower is better)
Translates to: VGGGGDDKQPVQQVYGDATSPAR*GSAPCR
Trigger: CCTACACGGTGCTGACCCGCATCGGGCTGGAGACGT...GGCATCCCCATAGACCTGCTGGACCGGCTGCTTATCGTCTCCACCACCCCCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CCA 90 bp GATCAGGACAGGCGCCATGTCACTCTCCAGGGCCCGGTTGAGGAAGGAGAAGCTCCCAGTCCCCGGATGTaGGAGTGGGCACCGATTCGC +
Preference number: 4 (lower is better)
Translates to: DQDRRHVTLQGPVEEGEAPSPRM*EWAPIR
Trigger: GCGAATCGGTGCCCACTCCCACATCCGGGGACTGGG...AGCTTCTCCTTCCTCAACCGGGCCCTGGAGAGTGACATGGCGCCTGTCCTGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CCA 90 bp TGCGCCATGCCCATGGCGATGGCCGTCTTCCCCGTGCCCGGCTGGCCAGCAATAGCTGGTCGATCAATCTaGATCTCCACCACCTCCCCT +
Preference number: 4 (lower is better)
Translates to: CAMPMAMAVFPVPGWPAIAGRSI*ISTTSP
Trigger: AGGGGAGGTGGTGGAGATCCAGATTGATCGACCAGC...TATTGCTGGCCAGCCGGGCACGGGGAAGACGGCCATCGCCATGGGCATGGCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593570.5
ENST00000596247.5
CDS-3UTR CCA 90 bp GTGAGGGCTCTGGTAGCTGGTGCCCCGGATTCGCGTGATGCCACGGTTGGTGGCCTGGAGCTCCCCATCTaGGCACTGCACGAACTTGGT +
Preference number: 4 (lower is better)
Translates to: VRALVAGAPDSRDATVGGLELPI*ALHELG
Trigger: ACCAAGTTCGTGCAGTGCCCAGATGGGGAGCTCCAG...GCCACCAACCGTGGCATCACGCGAATCCGGGGCACCAGCTACCAGAGCCCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CCA 90 bp GCCCATGGCGATGGCCGTCTTCCCCGTGCCCGGCTGGCCAGCAATAAGGACTGCGCAGCTAGTCTCTACTaGGTCCTCAGCTCACAAGCG +
Preference number: 4 (lower is better)
Translates to: AHGDGRLPRARLASNKDCAASLY*VLSSQA
Trigger: CGCTTGTGAGCTGAGGACCCAGTAGAGACTAGCTGC...GCAGTCCTTATTGCTGGCCAGCCGGGCACGGGGAAGACGGCCATCGCCATGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593570.5
CDS-3UTR TCA 90 bp GTGGGAGTGGGCACCGATTCGCTCAATCCTTGTTACATCACGGATCTCCGGGACCGCCGTGCCGCCAGCTaGCCCACCATGCCTTGCGAA +
Preference number: 4 (lower is better)
Translates to: VGVGTDSLNPCYITDLRDRRAAS*PTMPCE
Trigger: TTCGCAAGGCATGGTGGGTCAGCTGGCGGCACGGCG...GTCCCGGAGATCCGTGATGTAACAAGGATTGAGCGAATCGGTGCCCACTCCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595811.5
CDS-3UTR TCA 90 bp GGAGGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTAAGTCGCGGGCGCGTGTaGAGGAGCGGCCCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: GGVHGLAFEFVEEEGVLVSRGRV*RSGPAW
Trigger: CCAAGCTGGGCCGCTCCTTCACACGCGCCCGCGACT...TACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR TCA 90 bp AGGAAGGCGTCCTGGTACTCCTTCATGTACTGCGTGGAGCGGGACTCGTCCAGGCTCCCCTGTGTCACCTaGGAAGAGCGCCAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: RKASWYSFMYCVERDSSRLPCVT*EERQEA
Trigger: GGCTTCCTGGCGCTCTTCTCAGGTGACACAGGGGAG...CCTGGACGAGTCCCGCTCCACGCAGTACATGAAGGAGTACCAGGACGCCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR TCA 90 bp GATTCGCGTGATGCCACGGTTGGTGGCCATGATCAGGACAGGCGCCATGTCACTTGCCCCGGATTCGCGTaGTGCCACGGTTGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: DSRDATVGGHDQDRRHVTCPGFA*CHGWWP
Trigger: TGGCCACCAACCGTGGCATCACGCGAATCCGGGGCA...AGTGACATGGCGCCTGTCCTGATCATGGCCACCAACCGTGGCATCACGCGAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR TCA 90 bp CAGGGAGAAGATTTCACTGCCGGCGATGGCTGTGAATGGCGTGTCAGGGCCCAGGGTGGGAGGCGCACATaGGGTGATTTCCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: QGEDFTAGDGCEWRVRAQGGRRT*GDFLWG
Trigger: GCCCCACAGGAAATCACCTCATGTGCGCCTCCCACC...CTGGGCCCTGACACGCCATTCACAGCCATCGCCGGCAGTGAAATCTTCTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596247.5
CDS-3UTR GCA 90 bp TTCACTGCCGGCGATGGCTGTGAATGGCGTGTCAGGGCCCAGGGCCTGCGCCATGGAGCCCGTCCCTGTTaGTGGTCGATCAATCTGGAT +
Preference number: 4 (lower is better)
Translates to: FTAGDGCEWRVRAQGLRHGARPC*WSINLD
Trigger: ATCCAGATTGATCGACCAGCAACAGGGACGGGCTCC...ATGGCGCAGGCCCTGGGCCCTGACACGCCATTCACAGCCATCGCCGGCAGTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593570.5
ENST00000596247.5
CDS-3UTR GCA 90 bp ATGCCCATGGCGATGGCCGTCTTCCCCGTGCCCGGCTGGCCAGCAATAAGGACTCCAGCTTGGAGATCTTaGCCGTCGCCTTGTCGATGG +
Preference number: 4 (lower is better)
Translates to: MPMAMAVFPVPGWPAIRTPAWRS*PSPCRW
Trigger: CCATCGACAAGGCGACGGGCAAGATCTCCAAGCTGG...AGTCCTTATTGCTGGCCAGCCGGGCACGGGGAAGACGGCCATCGCCATGGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596247.5
CDS-3UTR GCA 90 bp GTGAGGGCTCTGGTAGCTGGTGCCCCGGATTCGCGTGATGCCACGGTTGGTGGCTGTGCACCACCTCCTTaGGTTTCTGGAGCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: VRALVAGAPDSRDATVGGCAPPP*VSGAPH
Trigger: ATGGGGAGCTCCAGAAACGCAAGGAGGTGGTGCACA...GCCACCAACCGTGGCATCACGCGAATCCGGGGCACCAGCTACCAGAGCCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR GCA 90 bp CCGGATTCGCGTGATGCCACGGTTGGTGGCCATGATCAGGACAGGCGCCATGTCGCAGGTCTATGGGGATaGCGTGAGGGCTCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: PDSRDATVGGHDQDRRHVAGLWG*REGSGS
Trigger: GCTACCAGAGCCCTCACGGCATCCCCATAGACCTGC...GACATGGCGCCTGTCCTGATCATGGCCACCAACCGTGGCATCACGCGAATCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR GCA 90 bp GGAGGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACCCTCCCACCGAGGCTaGGCTGGAAGACGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: GGVHGLAFEFVEEEGVLVPSHRG*AGRRAS
Trigger: GGACGCCCGTCTTCCAGCGCAGCCTCGGTGGGAGGG...TACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601968.5
CDS-3UTR CCA 90 bp ACTCCTTCATGTACTGCGTGGAGCGGGACTCGTCCAGGAAGAGTGAGTAGACCCCCATGCCCATGGCGATaGCCGTCTTCCCCGTGCCCG +
Preference number: 4 (lower is better)
Translates to: TPSCTAWSGTRPGRVSRPPCPWR*PSSPCP
Trigger: CGGGCACGGGGAAGACGGCCATCGCCATGGGCATGG...GGGTCTACTCACTCTTCCTGGACGAGTCCCGCTCCACGCAGTACATGAAGGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CCA 90 bp CAGGTCTATGGGGATGCCGTGAGGGCTCTGGTAGCTGGTGCCCCGGATTCGCGTTCAGTTTGCCCACCTTaGAGCCCGTCCCTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: QVYGDAVRALVAGAPDSRSVCPP*SPSLLL
Trigger: CAGCAACAGGGACGGGCTCCAAGGTGGGCAAACTGA...ACGCGAATCCGGGGCACCAGCTACCAGAGCCCTCACGGCATCCCCATAGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CCA 90 bp AGGCGCCATGTCACTCTCCAGGGCCCGGTTGAGGAAGGAGAAGCTCTCGATGTCAGGAGCGGCCCAGCTTaGAGATCTTGCCCGTCGCCT +
Preference number: 4 (lower is better)
Translates to: RRHVTLQGPVEEGEALDVRSGPA*RSCPSP
Trigger: AGGCGACGGGCAAGATCTCCAAGCTGGGCCGCTCCT...GACATCGAGAGCTTCTCCTTCCTCAACCGGGCCCTGGAGAGTGACATGGCGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CCA 90 bp ATGCCCATGGCGATGGCCGTCTTCCCCGTGCCCGGCTGGCCAGCAATAAGGACTCTGGAGCTCCCCATCTaGGCACTGCACGAACTTGGT +
Preference number: 4 (lower is better)
Translates to: MPMAMAVFPVPGWPAIRTLELPI*ALHELG
Trigger: ACCAAGTTCGTGCAGTGCCCAGATGGGGAGCTCCAG...AGTCCTTATTGCTGGCCAGCCGGGCACGGGGAAGACGGCCATCGCCATGGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596247.5
CDS-3UTR CCA 90 bp GATCAGGACAGGCGCCATGTCACTCTCCAGGGCCCGGTTGAGGAAGGAGAAGCTGCCTTGCGAAGCCTGTaGGTGGGAGGCGCACATGAG +
Preference number: 4 (lower is better)
Translates to: DQDRRHVTLQGPVEEGEAALRSL*VGGAHE
Trigger: CTCATGTGCGCCTCCCACCCACAGGCTTCGCAAGGC...AGCTTCTCCTTCCTCAACCGGGCCCTGGAGAGTGACATGGCGCCTGTCCTGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596247.5
CDS-3UTR TCA 90 bp GGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCGCCGTGCCGCCAGCTaGCCCACCATGCCTTGCGAA +
Preference number: 4 (lower is better)
Translates to: GVHGLAFEFVEEEGVLVLRRAAS*PTMPCE
Trigger: TTCGCAAGGCATGGTGGGTCAGCTGGCGGCACGGCG...GAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR TCA 90 bp CAGGGAGAAGATTTCACTGCCGGCGATGGCTGTGAATGGCGTGTCAGGGCCCAGACAGCACTCCAGGGATaGTCTCCGCCTTGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: QGEDFTAGDGCEWRVRAQTALQG*SPPCPP
Trigger: AGGAGGGCAAGGCGGAGATCATCCCTGGAGTGCTGT...CTGGGCCCTGACACGCCATTCACAGCCATCGCCGGCAGTGAAATCTTCTCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596247.5
CDS-3UTR TCA 90 bp ATCTCCAGGGAGAAGATTTCACTGCCGGCGATGGCTGTGAATGGCGTGTCAGGGTGCCCCGGATTCGCGTaGTGCCACGGTTGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: ISREKISLPAMAVNGVSGCPGFA*CHGWWP
Trigger: TGGCCACCAACCGTGGCATCACGCGAATCCGGGGCA...CCCTGACACGCCATTCACAGCCATCGCCGGCAGTGAAATCTTCTCCCTGGAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596247.5
CDS-3UTR TCA 90 bp AGCGCAGTGACGTCTCCAGCCCGATGCGGGTCAGCACCGTGTAGGCGTCCTCACGTGAGTAGACCCGCTTaGTGTCATCCACCTGCACTT +
Preference number: 4 (lower is better)
Translates to: SAVTSPARCGSAPCRRPHVSRPA*CHPPAL
Trigger: AAGTGCAGGTGGATGACATCAAGCGGGTCTACTCAC...GTGAGGACGCCTACACGGTGCTGACCCGCATCGGGCTGGAGACGTCACTGCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR TCA 90 bp GGCGTCCTCACTCATCTCCACATCTTCTTCCTCGCACCGGATGCGGAGGATCTGTCGCCTTGTCGATGGTaGTCACGTCCCCGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: GVLTHLHIFFLAPDAEDLSPCRW*SRPRPG
Trigger: TCCAGGCCGGGGACGTGATCACCATCGACAAGGCGA...CAGATCCTCCGCATCCGGTGCGAGGAAGAAGATGTGGAGATGAGTGAGGACGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596247.5
CDS-3UTR GCA 90 bp GGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCCAGGGCCTGCGCCATaGCCATGGCGATGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: GVHGLAFEFVEEEGVLVLPGPAP*PWRWPS
Trigger: AGACGGCCATCGCCATGGGCATGGCGCAGGCCCTGG...GAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR GCA 90 bp GGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCTCAGGGCCCAGGGCCTaGGCCATGCCCATGGCGATG +
Preference number: 4 (lower is better)
Translates to: GVHGLAFEFVEEEGVLVLSGPRA*AMPMAM
Trigger: CATCGCCATGGGCATGGCGCAGGCCCTGGGCCCTGA...GAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR GCA 90 bp GGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCGACCGCCGGAAGGCCTaGGTCAGCGCCTCGGTCTTG +
Preference number: 4 (lower is better)
Translates to: GVHGLAFEFVEEEGVLVLDRRKA*VSASVL
Trigger: CAAGACCGAGGCGCTGACGCAGGCCTTCCGGCGGTC...GAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR GCA 90 bp GTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCGACCGCCGGAAGGCCTaGGTCAGCGCCTCGGTCTTG +
Preference number: 4 (lower is better)
Translates to: VSMVSPLSSLKRKASWYSDRRKA*VSASVL
Trigger: CAAGACCGAGGCGCTGACGCAGGCCTTCCGGCGGTC...GGAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR GCA 90 bp CTCCAGCCCGATGCGGGTCAGCACCGTGTAGGCGTCCTCACTCATCTCCACATCCCAGCTTGGAGATCTTaGCCGTCGCCTTGTCGATGG +
Preference number: 4 (lower is better)
Translates to: LQPDAGQHRVGVLTHLHIPAWRS*PSPCRW
Trigger: CCATCGACAAGGCGACGGGCAAGATCTCCAAGCTGG...GATGTGGAGATGAGTGAGGACGCCTACACGGTGCTGACCCGCATCGGGCTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR GCA 90 bp CTCGTCGATGAACAGCACTCCAGGGATGATCTCCGCCTTGCCCTCCTCGCGCCAATGACGTCGATCTCGTaGAGGGACACGGTGTGCACC +
Preference number: 4 (lower is better)
Translates to: LVDEQHSRDDLRLALLAPMTSIS*RDTVCT
Trigger: GGTGCACACCGTGTCCCTGCACGAGATCGACGTCAT...TGGCGCGAGGAGGGCAAGGCGGAGATCATCCCTGGAGTGCTGTTCATCGACGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR GCA 90 bp GATCAGGACAGGCGCCATGTCACTCTCCAGGGCCCGGTTGAGGAAGGAGAAGCTGCAGGTCTATGGGGATaGCGTGAGGGCTCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: DQDRRHVTLQGPVEEGEAAGLWG*REGSGS
Trigger: GCTACCAGAGCCCTCACGGCATCCCCATAGACCTGC...AGCTTCTCCTTCCTCAACCGGGCCCTGGAGAGTGACATGGCGCCTGTCCTGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR GCA 90 bp CCGGATTCGCGTGATGCCACGGTTGGTGGCCATGATCAGGACAGGCGCCATGTCCTTCCTCGCACCGGATaGGGAGGATCTGCTTCGTGT +
Preference number: 4 (lower is better)
Translates to: PDSRDATVGGHDQDRRHVLPRTG*GGSASC
Trigger: ACACGAAGCAGATCCTCCGCATCCGGTGCGAGGAAG...GACATGGCGCCTGTCCTGATCATGGCCACCAACCGTGGCATCACGCGAATCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR GCA 90 bp ATGGCGTGTCAGGGCCCAGGGCCTGCGCCATGCCCATGGCGATGGCCGTCTTCCTCAGCTCACAAGCGGTaGTTGGCTCTTCATCCTTTT +
Preference number: 4 (lower is better)
Translates to: MACQGPGPAPCPWRWPSSSAHKR*LALHPF
Trigger: AAAAGGATGAAGAGCCAAGCACCGCTTGTGAGCTGA...GGAAGACGGCCATCGCCATGGGCATGGCGCAGGCCCTGGGCCCTGACACGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593570.5
CDS-3UTR GCA 90 bp GTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCCGTGGCGGGACTTTATaGCCCGCCCTCCCACCGAGG +
Preference number: 4 (lower is better)
Translates to: VSMVSPLSSLKRKASWYSRGGTL*PALPPR
Trigger: CCTCGGTGGGAGGGCGGGGCATAAAGTCCCGCCACG...GGAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601968.5
CDS-3UTR CCA 90 bp ACAGGCGCCATGTCACTCTCCAGGGCCCGGTTGAGGAAGGAGAAGCTCTCGATGCCCCGGATGTGGGAGTaGGCACCGATTCGCTCAATC +
Preference number: 4 (lower is better)
Translates to: TGAMSLSRARLRKEKLSMPRMWE*APIRSI
Trigger: GATTGAGCGAATCGGTGCCCACTCCCACATCCGGGG...CATCGAGAGCTTCTCCTTCCTCAACCGGGCCCTGGAGAGTGACATGGCGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CCA 90 bp GGAGGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACCATGCCCATGGCGATaGCCGTCTTCCCCGTGCCCG +
Preference number: 4 (lower is better)
Translates to: GGVHGLAFEFVEEEGVLVPCPWR*PSSPCP
Trigger: CGGGCACGGGGAAGACGGCCATCGCCATGGGCATGG...TACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR CCA 90 bp GTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCCCATGCCCATGGCGATaGCCGTCTTCCCCGTGCCCG +
Preference number: 4 (lower is better)
Translates to: VSMVSPLSSLKRKASWYSPCPWR*PSSPCP
Trigger: CGGGCACGGGGAAGACGGCCATCGCCATGGGCATGG...GGAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR CCA 90 bp GGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCCTGCGCCATGCCCATaGCGATGGCCGTCTTCCCCG +
Preference number: 4 (lower is better)
Translates to: GVHGLAFEFVEEEGVLVLPAPCP*RWPSSP
Trigger: CGGGGAAGACGGCCATCGCCATGGGCATGGCGCAGG...GAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR CCA 90 bp GGAGGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACCTGCGCCATGCCCATaGCGATGGCCGTCTTCCCCG +
Preference number: 4 (lower is better)
Translates to: GGVHGLAFEFVEEEGVLVPAPCP*RWPSSP
Trigger: CGGGGAAGACGGCCATCGCCATGGGCATGGCGCAGG...TACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR CCA 90 bp CTCCAGCCCGATGCGGGTCAGCACCGTGTAGGCGTCCTCACTCATCTCCACATCTCAGTTTGCCCACCTTaGAGCCCGTCCCTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: LQPDAGQHRVGVLTHLHISVCPP*SPSLLL
Trigger: CAGCAACAGGGACGGGCTCCAAGGTGGGCAAACTGA...GATGTGGAGATGAGTGAGGACGCCTACACGGTGCTGACCCGCATCGGGCTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CCA 90 bp TTCACTGCCGGCGATGGCTGTGAATGGCGTGTCAGGGCCCAGGGCCTGCGCCATTGCCCAGGTCGTAGATaGTCTCCATCTCTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: FTAGDGCEWRVRAQGLRHCPGRR*SPSLWS
Trigger: AGACCACAGAGATGGAGACCATCTACGACCTGGGCA...ATGGCGCAGGCCCTGGGCCCTGACACGCCATTCACAGCCATCGCCGGCAGTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593570.5
ENST00000596247.5
CDS-3UTR CCA 90 bp GGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCCACCGAGGCTGCGCTaGAAGACGGGCGTCCGGAAC +
Preference number: 4 (lower is better)
Translates to: GVHGLAFEFVEEEGVLVLPPRLR*KTGVRN
Trigger: GTTCCGGACGCCCGTCTTCCAGCGCAGCCTCGGTGG...GAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601968.5
3UTR CAA 72 bp TCGTCGATGAACAGCACTCCAGGGATGATCTCCGCCTaGCCCTCCTCGCGCCACTCAGCCACCTTGGCATTG +
Preference number: 4 (lower is better)
Translates to: SSMNSTPGMISA*PSSRHSATLAL
Trigger: CAATGCCAAGGTGGCTGAGTGGCGCGAGGAGGGCAAGGCGGAGATCATCCCTGGAGTGCTGTTCATCGACGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR TCA 90 bp GTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCTGCCGGCGATGGCTGTaGATGGCGTGTCAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: VSMVSPLSSLKRKASWYSCRRWL*MACQGP
Trigger: TGGGCCCTGACACGCCATTCACAGCCATCGCCGGCA...GGAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR TCA 90 bp GTCGATGAACAGCACTCCAGGGATGATCTCCGCCTTGCCCTCCTCGCGCCACTCTCGCCTTGTCGATGGTaGTCACGTCCCTTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: VDEQHSRDDLRLALLAPLSPCRW*SRPLSL
Trigger: CAAGGACAAGGGACGTGATCACCATCGACAAGGCGA...GAGTGGCGCGAGGAGGGCAAGGCGGAGATCATCCCTGGAGTGCTGTTCATCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000221413.10
CDS-3UTR TCA 90 bp GACCTCGTCGATGAACAGCACTCCAGGGATGATCTCCGCCTTGCCCTCCTCGCGCACGGACTTCTGACTTaGTCTCCCCTGTGTCACCTG +
Preference number: 4 (lower is better)
Translates to: DLVDEQHSRDDLRLALLAHGLLT*SPLCHL
Trigger: CAGGTGACACAGGGGAGATCAAGTCAGAAGTCCGTG...CGCGAGGAGGGCAAGGCGGAGATCATCCCTGGAGTGCTGTTCATCGACGAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR TCA 90 bp GTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCTGCCCCGGATTCGCGTaGTGCCACGGTTGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: VSMVSPLSSLKRKASWYSCPGFA*CHGWWP
Trigger: TGGCCACCAACCGTGGCATCACGCGAATCCGGGGCA...GGAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR TCA 90 bp GTAGGGGGTGGTGGAGACGATAAGCAGCCGGTCCAGCAGGTCTATGGGGATGCCCTCGTCCAGGAAGAGTaGGTAGACCCGCTTGATGTC +
Preference number: 4 (lower is better)
Translates to: VGGGGDDKQPVQQVYGDALVQEE*VDPLDV
Trigger: GACATCAAGCGGGTCTACTCACTCTTCCTGGACGAG...GGCATCCCCATAGACCTGCTGGACCGGCTGCTTATCGTCTCCACCACCCCCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR GCA 90 bp GTGGACCTCGTCGATGAACAGCACTCCAGGGATGATCTCCGCCTTGCCCTCCTCGCCAGCAATAAGGACTaGCCGACCGGCAATCTTCCC +
Preference number: 4 (lower is better)
Translates to: VDLVDEQHSRDDLRLALLASNKD*PTGNLP
Trigger: GGGAAGATTGCCGGTCGGGCAGTCCTTATTGCTGGC...GAGGAGGGCAAGGCGGAGATCATCCCTGGAGTGCTGTTCATCGACGAGGTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR GCA 90 bp CAGGGAGAAGATTTCACTGCCGGCGATGGCTGTGAATGGCGTGTCAGGGCCCAGGCCAGCAATAAGGACTaGCCGACCGGCAATCTTCCC +
Preference number: 4 (lower is better)
Translates to: QGEDFTAGDGCEWRVRAQASNKD*PTGNLP
Trigger: GGGAAGATTGCCGGTCGGGCAGTCCTTATTGCTGGC...CTGGGCCCTGACACGCCATTCACAGCCATCGCCGGCAGTGAAATCTTCTCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593570.5
ENST00000596247.5
CDS-3UTR GCA 90 bp GTCGATGAACAGCACTCCAGGGATGATCTCCGCCTTGCCCTCCTCGCGCCACTCCGGATGCGGAGGATCTaGTTCGTGTCTTTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: VDEQHSRDDLRLALLAPLRMRRI*FVSFSL
Trigger: CAGCGAGAAAGACACGAAGCAGATCCTCCGCATCCG...GAGTGGCGCGAGGAGGGCAAGGCGGAGATCATCCCTGGAGTGCTGTTCATCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR GCA 90 bp GTCGATGAACAGCACTCCAGGGATGATCTCCGCCTTGCCCTCCTCGCGCCACTCGCACTTCTGTACCCTTaGGTTTCCGGCACACCAAGC +
Preference number: 4 (lower is better)
Translates to: VDEQHSRDDLRLALLAPLALLYP*VSGTPS
Trigger: GCTTGGTGTGCCGGAAACGCAAGGGTACAGAAGTGC...GAGTGGCGCGAGGAGGGCAAGGCGGAGATCATCCCTGGAGTGCTGTTCATCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CCA 90 bp AAGGCGTCCTGGTACTCCTTCATGTACTGCGTGGAGCGGGACTCGTCCAGGAAGCCCCGGATGTGGGAGTaGGCACCGATTCGCTCAATC +
Preference number: 4 (lower is better)
Translates to: KASWYSFMYCVERDSSRKPRMWE*APIRSI
Trigger: GATTGAGCGAATCGGTGCCCACTCCCACATCCGGGG...CTTCCTGGACGAGTCCCGCTCCACGCAGTACATGAAGGAGTACCAGGACGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CCA 90 bp CTCGTCGATGAACAGCACTCCAGGGATGATCTCCGCCTTGCCCTCCTCGCGCCAGCCCGTCCCTGTTGCTaGTCGATCAATCTGGATCTC +
Preference number: 4 (lower is better)
Translates to: LVDEQHSRDDLRLALLAPARPCC*SINLDL
Trigger: GAGATCCAGATTGATCGACCAGCAACAGGGACGGGC...TGGCGCGAGGAGGGCAAGGCGGAGATCATCCCTGGAGTGCTGTTCATCGACGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CCA 90 bp AGGAAGGCGTCCTGGTACTCCTTCATGTACTGCGTGGAGCGGGACTCGTCCAGGACCTCCTTGCGTTTCTaGAGCTCCCCATCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: RKASWYSFMYCVERDSSRTSLRF*SSPSGH
Trigger: GTGCCCAGATGGGGAGCTCCAGAAACGCAAGGAGGT...CCTGGACGAGTCCCGCTCCACGCAGTACATGAAGGAGTACCAGGACGCCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CCA 90 bp GCTGGATGGCGTAGCGCAGTGACGTCTCCAGCCCGATGCGGGTCAGCACCGTGTAAGAGGAAGGCGTCCTaGTACTCCTTCATGTACTGC +
Preference number: 4 (lower is better)
Translates to: AGWRSAVTSPARCGSAPCKRKAS*YSFMYC
Trigger: GCAGTACATGAAGGAGTACCAGGACGCCTTCCTCTT...ACACGGTGCTGACCCGCATCGGGCTGGAGACGTCACTGCGCTACGCCATCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR TCA 90 bp AGGCGCCATGTCACTCTCCAGGGCCCGGTTGAGGAAGGAGAAGCTCTCGATGTCCCATCTCTGTGGTCTTaGGGGTCAGTTTGCCCACCT +
Preference number: 4 (lower is better)
Translates to: RRHVTLQGPVEEGEALDVPSLWS*GSVCPP
Trigger: AGGTGGGCAAACTGACCCTCAAGACCACAGAGATGG...GACATCGAGAGCTTCTCCTTCCTCAACCGGGCCCTGGAGAGTGACATGGCGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR TCA 90 bp GTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCCTCCCCTGTGTCACCTaGGAAGAGCGCCAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: VSMVSPLSSLKRKASWYSLPCVT*EERQEA
Trigger: GGCTTCCTGGCGCTCTTCTCAGGTGACACAGGGGAG...GGAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR TCA 90 bp CCGGATTCGCGTGATGCCACGGTTGGTGGCCATGATCAGGACAGGCGCCATGTCGTGAGTAGACCCGCTTaGTGTCATCCACCTGCACTT +
Preference number: 4 (lower is better)
Translates to: PDSRDATVGGHDQDRRHVVSRPA*CHPPAL
Trigger: AAGTGCAGGTGGATGACATCAAGCGGGTCTACTCAC...GACATGGCGCCTGTCCTGATCATGGCCACCAACCGTGGCATCACGCGAATCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR TCA 90 bp GGAGGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTATCGCCTTGTCGATGGTaGTCACGTCCCCGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: GGVHGLAFEFVEEEGVLVSPCRW*SRPRPG
Trigger: TCCAGGCCGGGGACGTGATCACCATCGACAAGGCGA...TACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596247.5
ENST00000601968.5
CDS-3UTR GCA 90 bp GTGAGGGCTCTGGTAGCTGGTGCCCCGGATTCGCGTGATGCCACGGTTGGTGGCACCTTGGCATTGATCTaGTCACGGACTTCTGACTTG +
Preference number: 4 (lower is better)
Translates to: VRALVAGAPDSRDATVGGTLALI*SRTSDL
Trigger: CAAGTCAGAAGTCCGTGAGCAGATCAATGCCAAGGT...GCCACCAACCGTGGCATCACGCGAATCCGGGGCACCAGCTACCAGAGCCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR GCA 90 bp ATGATCAGGACAGGCGCCATGTCACTCTCCAGGGCCCGGTTGAGGAAGGAGAAGCTTCCTCGCACCGGATaGGGAGGATCTGCTTCGTGT +
Preference number: 4 (lower is better)
Translates to: MIRTGAMSLSRARLRKEKLPRTG*GGSASC
Trigger: ACACGAAGCAGATCCTCCGCATCCGGTGCGAGGAAG...CTTCTCCTTCCTCAACCGGGCCCTGGAGAGTGACATGGCGCCTGTCCTGATCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR GCA 90 bp GTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCACGTCTCCAGCCCGATaGGGGTCAGCACCGTGTAGG +
Preference number: 4 (lower is better)
Translates to: VSMVSPLSSLKRKASWYSTSPAR*GSAPCR
Trigger: CCTACACGGTGCTGACCCGCATCGGGCTGGAGACGT...GGAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR GCA 90 bp CACCGATTCGCTCAATCCTTGTTACATCACGGATCTCCGGGACTTTGGTTGTGGACTGGCGCCAAGGACTaGGGAACCGGCCGTTGCGCC +
Preference number: 4 (lower is better)
Translates to: HRFAQSLLHHGSPGLWLWTGAKD*GTGRCA
Trigger: GGCGCAACGGCCGGTTCCGCAGTCCTTGGCGCCAGT...CCACAACCAAAGTCCCGGAGATCCGTGATGTAACAAGGATTGAGCGAATCGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595811.5
CDS-3UTR GCA 90 bp AAGAGGAAGGCGTCCTGGTACTCCTTCATGTACTGCGTGGAGCGGGACTCGTCCACCACATCAGGAAGCTaGCGAGGCTCCAAGGCATCG +
Preference number: 4 (lower is better)
Translates to: KRKASWYSFMYCVERDSSTTSGS*RGSKAS
Trigger: CGATGCCTTGGAGCCTCGGCAGCTTCCTGATGTGGT...GGACGAGTCCCGCTCCACGCAGTACATGAAGGAGTACCAGGACGCCTTCCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596247.5
CDS-3UTR CCA 90 bp GTGGGAGTGGGCACCGATTCGCTCAATCCTTGTTACATCACGGATCTCCGGGACCCCCGGATGTGGGAGTaGGCACCGATTCGCTCAATC +
Preference number: 4 (lower is better)
Translates to: VGVGTDSLNPCYITDLRDPRMWE*APIRSI
Trigger: GATTGAGCGAATCGGTGCCCACTCCCACATCCGGGG...GTCCCGGAGATCCGTGATGTAACAAGGATTGAGCGAATCGGTGCCCACTCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595811.5
CDS-3UTR CCA 90 bp GTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCTTCCCCGTGCCCGGCTaGCCAGCAATAAGGACTGCC +
Preference number: 4 (lower is better)
Translates to: VSMVSPLSSLKRKASWYSFPVPG*PAIRTA
Trigger: GGCAGTCCTTATTGCTGGCCAGCCGGGCACGGGGAA...GGAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR CCA 90 bp GACCTCGTCGATGAACAGCACTCCAGGGATGATCTCCGCCTTGCCCTCCTCGCGTGCCCAGGTCGTAGATaGTCTCCATCTCTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: DLVDEQHSRDDLRLALLACPGRR*SPSLWS
Trigger: AGACCACAGAGATGGAGACCATCTACGACCTGGGCA...CGCGAGGAGGGCAAGGCGGAGATCATCCCTGGAGTGCTGTTCATCGACGAGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CCA 90 bp CTCGTCGATGAACAGCACTCCAGGGATGATCTCCGCCTTGCCCTCCTCGCGCCATGCCCAGGTCGTAGATaGTCTCCATCTCTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: LVDEQHSRDDLRLALLAPCPGRR*SPSLWS
Trigger: AGACCACAGAGATGGAGACCATCTACGACCTGGGCA...TGGCGCGAGGAGGGCAAGGCGGAGATCATCCCTGGAGTGCTGTTCATCGACGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CCA 90 bp GGAGGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTAAGGAGCGGCCCAGCTTaGAGATCTTGCCCGTCGCCT +
Preference number: 4 (lower is better)
Translates to: GGVHGLAFEFVEEEGVLVRSGPA*RSCPSP
Trigger: AGGCGACGGGCAAGATCTCCAAGCTGGGCCGCTCCT...TACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR CCA 90 bp AAGGCGTCCTGGTACTCCTTCATGTACTGCGTGGAGCGGGACTCGTCCAGGAAGCCTTCATGTACTGCGTaGAGCGGGACTCGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: KASWYSFMYCVERDSSRKPSCTA*SGTRPG
Trigger: TCCTGGACGAGTCCCGCTCCACGCAGTACATGAAGG...CTTCCTGGACGAGTCCCGCTCCACGCAGTACATGAAGGAGTACCAGGACGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CCA 90 bp GCACCACCACACCTGCCTGTGCTTCCAGCTTGGAACTCAAGTGCCATTGGCACCCTCCTCATCACACACTaGCGCCAAGGACTGCGGAAC +
Preference number: 4 (lower is better)
Translates to: APPHLPVLPAWNSSAIGTLLITH*RQGLRN
Trigger: GTTCCGCAGTCCTTGGCGCCAGTGTGTGATGAGGAG...GGTGCCAATGGCACTTGAGTTCCAAGCTGGAAGCACAGGCAGGTGTGGTGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595811.5
CDS-3UTR TCA 90 bp AGGCTCCTGGGTGCAGCTAGTCTCTACTGGGTCCTCAGCTCACAAGCGGTGCTTCCATCTCTGTGGTCTTaGGGGTCAGTTTGCCCACCT +
Preference number: 4 (lower is better)
Translates to: RLLGAASLYWVLSSQAVLPSLWS*GSVCPP
Trigger: AGGTGGGCAAACTGACCCTCAAGACCACAGAGATGG...AAGCACCGCTTGTGAGCTGAGGACCCAGTAGAGACTAGCTGCACCCAGGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593570.5
CDS-3UTR TCA 90 bp ATGATCAGGACAGGCGCCATGTCACTCTCCAGGGCCCGGTTGAGGAAGGAGAAGCTGCTCACGGACTTCTaGCTTGATCTCCCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: MIRTGAMSLSRARLRKEKLLTDF*LDLPCV
Trigger: GACACAGGGGAGATCAAGTCAGAAGTCCGTGAGCAG...CTTCTCCTTCCTCAACCGGGCCCTGGAGAGTGACATGGCGCCTGTCCTGATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR TCA 90 bp AAGGCGTCCTGGTACTCCTTCATGTACTGCGTGGAGCGGGACTCGTCCAGGAAGCAGCCACCTTGGCATTaGTCTGCTCACGGACTTCTG +
Preference number: 4 (lower is better)
Translates to: KASWYSFMYCVERDSSRKQPPWH*SAHGLL
Trigger: CAGAAGTCCGTGAGCAGATCAATGCCAAGGTGGCTG...CTTCCTGGACGAGTCCCGCTCCACGCAGTACATGAAGGAGTACCAGGACGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR TCA 90 bp GGAGGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTAACAGCACTCCAGGGATaGTCTCCGCCTTGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: GGVHGLAFEFVEEEGVLVTALQG*SPPCPP
Trigger: AGGAGGGCAAGGCGGAGATCATCCCTGGAGTGCTGT...TACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR TCA 90 bp GGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCACAGCACTCCAGGGATaGTCTCCGCCTTGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: GVHGLAFEFVEEEGVLVLTALQG*SPPCPP
Trigger: AGGAGGGCAAGGCGGAGATCATCCCTGGAGTGCTGT...GAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR TCA 90 bp GGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCTCTCCAGGGCCCGGTTaGGGAAGGAGAAGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: GVHGLAFEFVEEEGVLVLSPGPG*GRRSSR
Trigger: TCGAGAGCTTCTCCTTCCTCAACCGGGCCCTGGAGA...GAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR TCA 90 bp GTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCTCTCCAGGGCCCGGTTaGGGAAGGAGAAGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: VSMVSPLSSLKRKASWYSSPGPG*GRRSSR
Trigger: TCGAGAGCTTCTCCTTCCTCAACCGGGCCCTGGAGA...GGAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR TCA 90 bp GGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCACGGTTGGTGGCCATaGTCAGGACAGGCGCCATGT +
Preference number: 4 (lower is better)
Translates to: GVHGLAFEFVEEEGVLVLHGWWP*SGQAPC
Trigger: ACATGGCGCCTGTCCTGATCATGGCCACCAACCGTG...GAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR TCA 90 bp AAGAGGAAGGCGTCCTGGTACTCCTTCATGTACTGCGTGGAGCGGGACTCGTCCCTCGTCCAGGAAGAGTaGGTAGACCCGCTTGATGTC +
Preference number: 4 (lower is better)
Translates to: KRKASWYSFMYCVERDSSLVQEE*VDPLDV
Trigger: GACATCAAGCGGGTCTACTCACTCTTCCTGGACGAG...GGACGAGTCCCGCTCCACGCAGTACATGAAGGAGTACCAGGACGCCTTCCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR GCA 90 bp GGAGGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTAGCAGGTCTATGGGGATaGCGTGAGGGCTCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: GGVHGLAFEFVEEEGVLVAGLWG*REGSGS
Trigger: GCTACCAGAGCCCTCACGGCATCCCCATAGACCTGC...TACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR GCA 90 bp GATTCGCGTGATGCCACGGTTGGTGGCCATGATCAGGACAGGCGCCATGTCACTCGGATGCGGAGGATCTaGTTCGTGTCTTTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: DSRDATVGGHDQDRRHVTRMRRI*FVSFSL
Trigger: CAGCGAGAAAGACACGAAGCAGATCCTCCGCATCCG...AGTGACATGGCGCCTGTCCTGATCATGGCCACCAACCGTGGCATCACGCGAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR GCA 90 bp CCCGATGCGGGTCAGCACCGTGTAGGCGTCCTCACTCATCTCCACATCTTCTTCGCACTTCTGTACCCTTaGGTTTCCGGCACACCAAGC +
Preference number: 4 (lower is better)
Translates to: PDAGQHRVGVLTHLHIFFALLYP*VSGTPS
Trigger: GCTTGGTGTGCCGGAAACGCAAGGGTACAGAAGTGC...GAAGAAGATGTGGAGATGAGTGAGGACGCCTACACGGTGCTGACCCGCATCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CCA 90 bp GGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCCCCGGATGTGGGAGTaGGCACCGATTCGCTCAATC +
Preference number: 4 (lower is better)
Translates to: GVHGLAFEFVEEEGVLVLPRMWE*APIRSI
Trigger: GATTGAGCGAATCGGTGCCCACTCCCACATCCGGGG...GAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR CCA 90 bp ATGATCAGGACAGGCGCCATGTCACTCTCCAGGGCCCGGTTGAGGAAGGAGAAGGCTGGTCGATCAATCTaGATCTCCACCACCTCCCCT +
Preference number: 4 (lower is better)
Translates to: MIRTGAMSLSRARLRKEKAGRSI*ISTTSP
Trigger: AGGGGAGGTGGTGGAGATCCAGATTGATCGACCAGC...CTTCTCCTTCCTCAACCGGGCCCTGGAGAGTGACATGGCGCCTGTCCTGATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CCA 90 bp GGCGTCCTCACTCATCTCCACATCTTCTTCCTCGCACCGGATGCGGAGGATCTGGCCCGTCCCTGTTGCTaGTCGATCAATCTGGATCTC +
Preference number: 4 (lower is better)
Translates to: GVLTHLHIFFLAPDAEDLARPCC*SINLDL
Trigger: GAGATCCAGATTGATCGACCAGCAACAGGGACGGGC...CAGATCCTCCGCATCCGGTGCGAGGAAGAAGATGTGGAGATGAGTGAGGACGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CCA 90 bp TCCTGGTACTCCTTCATGTACTGCGTGGAGCGGGACTCGTCCAGGAAGAGTGAGCCTTCATGTACTGCGTaGAGCGGGACTCGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SWYSFMYCVERDSSRKSEPSCTA*SGTRPG
Trigger: TCCTGGACGAGTCCCGCTCCACGCAGTACATGAAGG...CTCACTCTTCCTGGACGAGTCCCGCTCCACGCAGTACATGAAGGAGTACCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR TCA 90 bp GGAGGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTAGAGGCGCACATGAGGTaGTTTCCTGTGGGGCTACCA +
Preference number: 4 (lower is better)
Translates to: GGVHGLAFEFVEEEGVLVEAHMR*FPVGLP
Trigger: TGGTAGCCCCACAGGAAATCACCTCATGTGCGCCTC...TACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596247.5
CDS-3UTR GCA 90 bp GTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCGCCAGCAATAAGGACTaGCCGACCGGCAATCTTCCC +
Preference number: 4 (lower is better)
Translates to: VSMVSPLSSLKRKASWYSASNKD*PTGNLP
Trigger: GGGAAGATTGCCGGTCGGGCAGTCCTTATTGCTGGC...GGAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR GCA 90 bp GGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCCAGCTTGGAGATCTTaGCCGTCGCCTTGTCGATGG +
Preference number: 4 (lower is better)
Translates to: GVHGLAFEFVEEEGVLVLPAWRS*PSPCRW
Trigger: CCATCGACAAGGCGACGGGCAAGATCTCCAAGCTGG...GAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR GCA 90 bp GGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCTGCAGGGACACGGTGTaGACCACCTCCTTGCGTTTC +
Preference number: 4 (lower is better)
Translates to: GVHGLAFEFVEEEGVLVLCRDTV*TTSLRF
Trigger: GAAACGCAAGGAGGTGGTGCACACCGTGTCCCTGCA...GAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR GCA 90 bp GTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCTGCAGGGACACGGTGTaGACCACCTCCTTGCGTTTC +
Preference number: 4 (lower is better)
Translates to: VSMVSPLSSLKRKASWYSCRDTV*TTSLRF
Trigger: GAAACGCAAGGAGGTGGTGCACACCGTGTCCCTGCA...GGAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR GCA 90 bp GGAGGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTAATGACGTCGATCTCGTaGAGGGACACGGTGTGCACC +
Preference number: 4 (lower is better)
Translates to: GGVHGLAFEFVEEEGVLVMTSIS*RDTVCT
Trigger: GGTGCACACCGTGTCCCTGCACGAGATCGACGTCAT...TACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR CCA 90 bp TGTAGGCGTCCTCACTCATCTCCACATCTTCTTCCTCGCACCGGATGCGGAGGAGCTGGTCGATCAATCTaGATCTCCACCACCTCCCCT +
Preference number: 4 (lower is better)
Translates to: CRRPHSSPHLLPRTGCGGAGRSI*ISTTSP
Trigger: AGGGGAGGTGGTGGAGATCCAGATTGATCGACCAGC...TCCTCCGCATCCGGTGCGAGGAAGAAGATGTGGAGATGAGTGAGGACGCCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CCA 90 bp GTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCTCAGTTTGCCCACCTTaGAGCCCGTCCCTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: VSMVSPLSSLKRKASWYSSVCPP*SPSLLL
Trigger: CAGCAACAGGGACGGGCTCCAAGGTGGGCAAACTGA...GGAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR CCA 90 bp GTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCCTGGAGCTCCCCATCTaGGCACTGCACGAACTTGGT +
Preference number: 4 (lower is better)
Translates to: VSMVSPLSSLKRKASWYSLELPI*ALHELG
Trigger: ACCAAGTTCGTGCAGTGCCCAGATGGGGAGCTCCAG...GGAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR CCA 90 bp GGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCACCTCCTTGCGTTTCTaGAGCTCCCCATCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: GVHGLAFEFVEEEGVLVLTSLRF*SSPSGH
Trigger: GTGCCCAGATGGGGAGCTCCAGAAACGCAAGGAGGT...GAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR CCA 90 bp GGAGGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACCTTCATGTACTGCGTaGAGCGGGACTCGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: GGVHGLAFEFVEEEGVLVPSCTA*SGTRPG
Trigger: TCCTGGACGAGTCCCGCTCCACGCAGTACATGAAGG...TACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR CCA 90 bp GGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCGGCGTCCGGAACTCCTaGGTCCATTCCCAATGTCTC +
Preference number: 4 (lower is better)
Translates to: GVHGLAFEFVEEEGVLVLGVRNS*VHSQCL
Trigger: GAGACATTGGGAATGGACCCAGGAGTTCCGGACGCC...GAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601968.5
CDS-3UTR CCA 90 bp GGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCAATATTGTGGGGGCGTaGCGGGACTTTATGCCCCGC +
Preference number: 4 (lower is better)
Translates to: GVHGLAFEFVEEEGVLVLNIVGA*RDFMPR
Trigger: GCGGGGCATAAAGTCCCGCCACGCCCCCACAATATT...GAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601968.5
CDS-3UTR TCA 90 bp CACATCTTCTTCCTCGCACCGGATGCGGAGGATCTGCTTCGTGTCTTTCTCGCTCCATCTCTGTGGTCTTaGGGGTCAGTTTGCCCACCT +
Preference number: 4 (lower is better)
Translates to: HIFFLAPDAEDLLRVFLAPSLWS*GSVCPP
Trigger: AGGTGGGCAAACTGACCCTCAAGACCACAGAGATGG...AGCGAGAAAGACACGAAGCAGATCCTCCGCATCCGGTGCGAGGAAGAAGATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR TCA 90 bp GGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCCATCTCTGTGGTCTTaGGGGTCAGTTTGCCCACCT +
Preference number: 4 (lower is better)
Translates to: GVHGLAFEFVEEEGVLVLPSLWS*GSVCPP
Trigger: AGGTGGGCAAACTGACCCTCAAGACCACAGAGATGG...GAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR TCA 90 bp GTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCCACGGACTTCTGACTTaGTCTCCCCTGTGTCACCTG +
Preference number: 4 (lower is better)
Translates to: VSMVSPLSSLKRKASWYSHGLLT*SPLCHL
Trigger: CAGGTGACACAGGGGAGATCAAGTCAGAAGTCCGTG...GGAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR TCA 90 bp GGAGGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACACGGACTTCTGACTTaGTCTCCCCTGTGTCACCTG +
Preference number: 4 (lower is better)
Translates to: GGVHGLAFEFVEEEGVLVHGLLT*SPLCHL
Trigger: CAGGTGACACAGGGGAGATCAAGTCAGAAGTCCGTG...TACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR TCA 90 bp GGAGGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTGCTCACGGACTTCTaGCTTGATCTCCCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: GGVHGLAFEFVEEEGVLVLLTDF*LDLPCV
Trigger: GACACAGGGGAGATCAAGTCAGAAGTCCGTGAGCAG...TACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR TCA 90 bp GTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCCAGCCACCTTGGCATTaGTCTGCTCACGGACTTCTG +
Preference number: 4 (lower is better)
Translates to: VSMVSPLSSLKRKASWYSQPPWH*SAHGLL
Trigger: CAGAAGTCCGTGAGCAGATCAATGCCAAGGTGGCTG...GGAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR TCA 90 bp GTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCCTCGTCCAGGAAGAGTaGGTAGACCCGCTTGATGTC +
Preference number: 4 (lower is better)
Translates to: VSMVSPLSSLKRKASWYSLVQEE*VDPLDV
Trigger: GACATCAAGCGGGTCTACTCACTCTTCCTGGACGAG...GGAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR GCA 90 bp CACATCTTCTTCCTCGCACCGGATGCGGAGGATCTGCTTCGTGTCTTTCTCGCTGGAGCCCGTCCCTGTTaGTGGTCGATCAATCTGGAT +
Preference number: 4 (lower is better)
Translates to: HIFFLAPDAEDLLRVFLAGARPC*WSINLD
Trigger: ATCCAGATTGATCGACCAGCAACAGGGACGGGCTCC...AGCGAGAAAGACACGAAGCAGATCCTCCGCATCCGGTGCGAGGAAGAAGATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR GCA 90 bp GGAGGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTAGGAGCCCGTCCCTGTTaGTGGTCGATCAATCTGGAT +
Preference number: 4 (lower is better)
Translates to: GGVHGLAFEFVEEEGVLVGARPC*WSINLD
Trigger: ATCCAGATTGATCGACCAGCAACAGGGACGGGCTCC...TACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR GCA 90 bp GAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCTTCATGTACTGCGTGGAGCGTGTGCACCACCTCCTTaGGTTTCTGGAGCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: EFVEEEGVLVLLHVLRGACAPPP*VSGAPH
Trigger: ATGGGGAGCTCCAGAAACGCAAGGAGGTGGTGCACA...CGCTCCACGCAGTACATGAAGGAGTACCAGGACGCCTTCCTCTTCAACGAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR GCA 90 bp GGAGGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTATGTGCACCACCTCCTTaGGTTTCTGGAGCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: GGVHGLAFEFVEEEGVLVCAPPP*VSGAPH
Trigger: ATGGGGAGCTCCAGAAACGCAAGGAGGTGGTGCACA...TACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR GCA 90 bp GTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCCGGATGCGGAGGATCTaGTTCGTGTCTTTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: VSMVSPLSSLKRKASWYSRMRRI*FVSFSL
Trigger: CAGCGAGAAAGACACGAAGCAGATCCTCCGCATCCG...GGAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR GCA 90 bp GTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCTACTCCTTCATGTACTaGGTGGAGCGGGACTCGTCC +
Preference number: 4 (lower is better)
Translates to: VSMVSPLSSLKRKASWYSYSFMY*VERDSS
Trigger: GGACGAGTCCCGCTCCACGCAGTACATGAAGGAGTA...GGAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR GCA 90 bp GAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCTTCATGTACTGCGTGGAGCGTACTCCTTCATGTACTaGGTGGAGCGGGACTCGTCC +
Preference number: 4 (lower is better)
Translates to: EFVEEEGVLVLLHVLRGAYSFMY*VERDSS
Trigger: GGACGAGTCCCGCTCCACGCAGTACATGAAGGAGTA...CGCTCCACGCAGTACATGAAGGAGTACCAGGACGCCTTCCTCTTCAACGAACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR GCA 90 bp GGAGGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTATACTCCTTCATGTACTaGGTGGAGCGGGACTCGTCC +
Preference number: 4 (lower is better)
Translates to: GGVHGLAFEFVEEEGVLVYSFMY*VERDSS
Trigger: GGACGAGTCCCGCTCCACGCAGTACATGAAGGAGTA...TACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR CCA 90 bp GGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCGCTGGTCGATCAATCTaGATCTCCACCACCTCCCCT +
Preference number: 4 (lower is better)
Translates to: GVHGLAFEFVEEEGVLVLAGRSI*ISTTSP
Trigger: AGGGGAGGTGGTGGAGATCCAGATTGATCGACCAGC...GAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR CCA 90 bp GGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCGCCCGTCCCTGTTGCTaGTCGATCAATCTGGATCTC +
Preference number: 4 (lower is better)
Translates to: GVHGLAFEFVEEEGVLVLARPCC*SINLDL
Trigger: GAGATCCAGATTGATCGACCAGCAACAGGGACGGGC...GAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR CCA 90 bp AAGAGGAAGGCGTCCTGGTACTCCTTCATGTACTGCGTGGAGCGGGACTCGTCCAAGAGGAAGGCGTCCTaGTACTCCTTCATGTACTGC +
Preference number: 4 (lower is better)
Translates to: KRKASWYSFMYCVERDSSKRKAS*YSFMYC
Trigger: GCAGTACATGAAGGAGTACCAGGACGCCTTCCTCTT...GGACGAGTCCCGCTCCACGCAGTACATGAAGGAGTACCAGGACGCCTTCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CCA 90 bp GTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCCCGGGACTTTGGTTGTaGCTGTCAACTGCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: VSMVSPLSSLKRKASWYSPGLWL*LSTARV
Trigger: GACTCTGGCAGTTGACAGCCACAACCAAAGTCCCGG...GGAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601968.5
CDS-3UTR CCA 90 bp GTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCGGATCTCCGGGACTTTaGTTGTGGCTGTCAACTGCC +
Preference number: 4 (lower is better)
Translates to: VSMVSPLSSLKRKASWYSGSPGL*LWLSTA
Trigger: GGCAGTTGACAGCCACAACCAAAGTCCCGGAGATCC...GGAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601968.5
CDS-3UTR CCA 90 bp TCCTGGTACTCCTTCATGTACTGCGTGGAGCGGGACTCGTCCAGGAAGAGTGAGCCTGTGGGGCTACCATaGCATTTCTACCACATCAGG +
Preference number: 4 (lower is better)
Translates to: SWYSFMYCVERDSSRKSEPVGLP*HFYHIR
Trigger: CCTGATGTGGTAGAAATGCCATGGTAGCCCCACAGG...CTCACTCTTCCTGGACGAGTCCCGCTCCACGCAGTACATGAAGGAGTACCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596247.5
CDS-3UTR TCA 90 bp GTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCGTGAGTAGACCCGCTTaGTGTCATCCACCTGCACTT +
Preference number: 4 (lower is better)
Translates to: VSMVSPLSSLKRKASWYSVSRPA*CHPPAL
Trigger: AAGTGCAGGTGGATGACATCAAGCGGGTCTACTCAC...GGAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR GCA 90 bp GATTCGCGTGATGCCACGGTTGGTGGCCATGATCAGGACAGGCGCCATGTCACTACCTTGGCATTGATCTaGTCACGGACTTCTGACTTG +
Preference number: 4 (lower is better)
Translates to: DSRDATVGGHDQDRRHVTTLALI*SRTSDL
Trigger: CAAGTCAGAAGTCCGTGAGCAGATCAATGCCAAGGT...AGTGACATGGCGCCTGTCCTGATCATGGCCACCAACCGTGGCATCACGCGAATC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR GCA 90 bp GGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCGTTGTGGCTGTCAACTaGCAGAGTCCTAGCGGAAAC +
Preference number: 4 (lower is better)
Translates to: GVHGLAFEFVEEEGVLVLVVAVN*QSPSGN
Trigger: GTTTCCGCTAGGACTCTGGCAGTTGACAGCCACAAC...GAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601968.5
CDS-3UTR GCA 90 bp GGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCACTTCTGTACCCGGATaGGGAGGATCTGCTTCGTGT +
Preference number: 4 (lower is better)
Translates to: GVHGLAFEFVEEEGVLVLTSVPG*GGSASC
Trigger: ACACGAAGCAGATCCTCCGCATCCGGGTACAGAAGT...GAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601968.5
CDS-3UTR GCA 90 bp CGGATGTGGGAGTGGGCACCGATTCGCTCAATCCTTGTTACATCACGGATCTCCCACCACACCTGCCTGTaGTTCCAGCTTGGAACTCAA +
Preference number: 4 (lower is better)
Translates to: RMWEWAPIRSILVTSRISHHTCL*FQLGTQ
Trigger: TTGAGTTCCAAGCTGGAAGCACAGGCAGGTGTGGTG...GGAGATCCGTGATGTAACAAGGATTGAGCGAATCGGTGCCCACTCCCACATCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595811.5
CDS-3UTR GCA 90 bp TGGGCACCGATTCGCTCAATCCTTGTTACATCACGGATCTCCGGGACTTTGGTTCTGCACCACCACACCTaGCTGTGCTTCCAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: WAPIRSILVTSRISGTLVLHHHT*LCFQLG
Trigger: TCCAAGCTGGAAGCACAGGCAGGTGTGGTGGTGCAG...AACCAAAGTCCCGGAGATCCGTGATGTAACAAGGATTGAGCGAATCGGTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595811.5
CDS-3UTR CCA 90 bp GGAGGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTATGCCCAGGTCGTAGATaGTCTCCATCTCTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: GGVHGLAFEFVEEEGVLVCPGRR*SPSLWS
Trigger: AGACCACAGAGATGGAGACCATCTACGACCTGGGCA...TACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR CCA 90 bp GTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCAAGAGGAAGGCGTCCTaGTACTCCTTCATGTACTGC +
Preference number: 4 (lower is better)
Translates to: VSMVSPLSSLKRKASWYSKRKAS*YSFMYC
Trigger: GCAGTACATGAAGGAGTACCAGGACGCCTTCCTCTT...GGAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR CCA 90 bp GGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCATTCCCAATGTCTCCTaGCTCCTCCTCCTTTTGCTC +
Preference number: 4 (lower is better)
Translates to: GVHGLAFEFVEEEGVLVLIPNVS*LLLLLL
Trigger: GAGCAAAAGGAGGAGGAGCCAGGAGACATTGGGAAT...GAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601968.5
CDS-3UTR TCA 90 bp TGGGCACCGATTCGCTCAATCCTTGTTACATCACGGATCTCCGGGACTTTGGTTGTTCAACGGTTGCCATaGTGCTCACCAACTGCCAGA +
Preference number: 4 (lower is better)
Translates to: WAPIRSILVTSRISGTLVVQRLP*CSPTAR
Trigger: TCTGGCAGTTGGTGAGCATCATGGCAACCGTTGAAC...AACCAAAGTCCCGGAGATCCGTGATGTAACAAGGATTGAGCGAATCGGTGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595811.5
CDS-3UTR GCA 90 bp GGAGGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTAACCTTGGCATTGATCTaGTCACGGACTTCTGACTTG +
Preference number: 4 (lower is better)
Translates to: GGVHGLAFEFVEEEGVLVTLALI*SRTSDL
Trigger: CAAGTCAGAAGTCCGTGAGCAGATCAATGCCAAGGT...TACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR GCA 90 bp GTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCCCCGCTCAGGCCGATTaGAAAATTCTTAGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: VSMVSPLSSLKRKASWYSPAQAD*KILSCS
Trigger: AGAACAGCTAAGAATTTTGCAATCGGCCTGAGCGGG...GGAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601968.5
CDS-3UTR CCA 90 bp TGGGCACCGATTCGCTCAATCCTTGTTACATCACGGATCTCCGGGACTTTGGTTAGCCTTCTGAGTAGCTaGGATTACAGGCCTGCACCA +
Preference number: 4 (lower is better)
Translates to: WAPIRSILVTSRISGTLVSLLSS*DYRPAP
Trigger: TGGTGCAGGCCTGTAATCCCAGCTACTCAGAAGGCT...AACCAAAGTCCCGGAGATCCGTGATGTAACAAGGATTGAGCGAATCGGTGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595811.5
CDS-3UTR TCA 90 bp GGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCTTCTTAGCTGTTCTTTaGGTAACCACACGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GVHGLAFEFVEEEGVLVLFLAVL*VTTRPP
Trigger: TGGAGGACGTGTGGTTACTCAAAGAACAGCTAAGAA...GAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601968.5
CDS-3UTR GCA 90 bp CACCGATTCGCTCAATCCTTGTTACATCACGGATCTCCGGGACTTTGGTTGTGGTTGGAGTTCAACGGTTaGCATGATGCTCACCAACTG +
Preference number: 4 (lower is better)
Translates to: HRFAQSLLHHGSPGLWLWLEFNG*HDAHQL
Trigger: CAGTTGGTGAGCATCATGGCAACCGTTGAACTCCAA...CCACAACCAAAGTCCCGGAGATCCGTGATGTAACAAGGATTGAGCGAATCGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595811.5
CDS-3UTR CCA 90 bp CTCAATCCTTGTTACATCACGGATCTCCGGGACTTTGGTTGTGGCTGTCTTTTTTCCAAGGCTCCCAAATaGCTCGAAGCGCAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: LNPCYITDLRDFGCGCLFSKAPK*LEAQGP
Trigger: AGGACCTTGCGCTTCGAGCCATTTGGGAGCCTTGGA...AAAAAGACAGCCACAACCAAAGTCCCGGAGATCCGTGATGTAACAAGGATTGAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000595811.5
CDS-3UTR GCA 90 bp CTCAATCCTTGTTACATCACGGATCTCCGGGACTTTGGTTGTGGCTGTCTTTTTTGCGGAACCGGCCGTTaGGCCAAGATGATTTTGAAA +
Preference number: 4 (lower is better)
Translates to: LNPCYITDLRDFGCGCLFCGTGR*AKMILK
Trigger: TTTCAAAATCATCTTGGCGCAACGGCCGGTTCCGCA...AAAAAGACAGCCACAACCAAAGTCCCGGAGATCCGTGATGTAACAAGGATTGAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000595811.5
CDS-3UTR CCA 90 bp AGTGGGCACCGATTCGCTCAATCCTTGTTACATCACGGATCTCCGGGACTTTGGGATGATTTTGAAAGTTaGAGTTCAACGGTTGCCATG +
Preference number: 4 (lower is better)
Translates to: SGHRFAQSLLHHGSPGLWDDFES*SSTVAM
Trigger: CATGGCAACCGTTGAACTCCAACTTTCAAAATCATC...CCAAAGTCCCGGAGATCCGTGATGTAACAAGGATTGAGCGAATCGGTGCCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595811.5
CDS-3UTR CAA 90 bp CCTGCGCCATGCCCATGGCGATGGCCGTCTTCCCCGTGCCCGGCTGGCCAGCAAGGGATGATCTCCGCCTaGCCCTCCTCGCGCCACTCA +
Preference number: 5 (lower is better)
Translates to: PAPCPWRWPSSPCPAGQQGMISA*PSSRHS
Trigger: TGAGTGGCGCGAGGAGGGCAAGGCGGAGATCATCCC...TTGCTGGCCAGCCGGGCACGGGGAAGACGGCCATCGCCATGGGCATGGCGCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596247.5
CDS CCA 90 bp GGGCGTGGCGGGACTTTATGCCCCGCCCTCCCACCGAGGCTGCGCTaGAAGACGGGCGTCCGGAACTCCTGGGTCCATTCCCAATGTCTC +
Preference number: 5 (lower is better)
Translates to: GRGGTLCPALPPRLR*KTGVRNSWVHSQCL
Trigger: GAGACATTGGGAATGGACCCAGGAGTTCCGGACGCCCGTCTTCCAGCGCAGCCTCGGTGGGAGGGCGGGGCATAAAGTCCCGCCACGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596837.5
ENST00000601968.5
CDS-3UTR CAA 90 bp TCCTTGATGCGAACGCCGATGGACCGCCGGAAGGCCTGCGTCAGCGCCTCGGTCGGGCACTGCACGAACTaGGTCTGGGAGCCCATAGCG +
Preference number: 5 (lower is better)
Translates to: SLMRTPMDRRKACVSASVGHCTN*VWEPIA
Trigger: CGCTATGGGCTCCCAGACCAAGTTCGTGCAGTGCCC...GACCGAGGCGCTGACGCAGGCCTTCCGGCGGTCCATCGGCGTTCGCATCAAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596247.5
CDS-3UTR CAA 90 bp GATGGCCGTCTTCCCCGTGCCCGGCTGGCCAGCAATAAGGACTGCCCGACCGGCATCTCCGTCTCCTCCTaGATGCGAACGCCGATGGAC +
Preference number: 5 (lower is better)
Translates to: DGRLPRARLASNKDCPTGISVSS*MRTPMD
Trigger: GTCCATCGGCGTTCGCATCAAGGAGGAGACGGAGAT...GCCGGTCGGGCAGTCCTTATTGCTGGCCAGCCGGGCACGGGGAAGACGGCCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593570.5
ENST00000596247.5
CDS-3UTR CAA 90 bp CAGGTCTATGGGGATGCCGTGAGGGCTCTGGTAGCTGGTGCCCCGGATTCGCGTAAGGAGCGGCCCAGCTaGGAGATCTTGCCCGTCGCC +
Preference number: 5 (lower is better)
Translates to: QVYGDAVRALVAGAPDSRKERPS*EILPVA
Trigger: GGCGACGGGCAAGATCTCCAAGCTGGGCCGCTCCTT...ACGCGAATCCGGGGCACCAGCTACCAGAGCCCTCACGGCATCCCCATAGACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CAA 90 bp GCCCCGGATTCGCGTGATGCCACGGTTGGTGGCCATGATCAGGACAGGCGCCATAAGGAGCGGCCCAGCTaGGAGATCTTGCCCGTCGCC +
Preference number: 5 (lower is better)
Translates to: APDSRDATVGGHDQDRRHKERPS*EILPVA
Trigger: GGCGACGGGCAAGATCTCCAAGCTGGGCCGCTCCTT...ATGGCGCCTGTCCTGATCATGGCCACCAACCGTGGCATCACGCGAATCCGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CAA 90 bp CACTCCAGGGATGATCTCCGCCTTGCCCTCCTCGCGCCACTCAGCCACCTTGGCCTCTCCAGGGCCCGGTaGAGGAAGGAGAAGCTCTCG +
Preference number: 5 (lower is better)
Translates to: HSRDDLRLALLAPLSHLGLSRAR*RKEKLS
Trigger: CGAGAGCTTCTCCTTCCTCAACCGGGCCCTGGAGAG...GCCAAGGTGGCTGAGTGGCGCGAGGAGGGCAAGGCGGAGATCATCCCTGGAGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS CCA 90 bp GCCCTCCCACCGAGGCTGCGCTGGAAGACGGGCGTCCGGAACTCCTaGGTCCATTCCCAATGTCTCCTGGCTCCTCCTCCTTTTGCTCAG +
Preference number: 5 (lower is better)
Translates to: ALPPRLRWKTGVRNS*VHSQCLLAPPPFAQ
Trigger: CTGAGCAAAAGGAGGAGGAGCCAGGAGACATTGGGAATGGACCCAGGAGTTCCGGACGCCCGTCTTCCAGCGCAGCCTCGGTGGGAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596837.5
ENST00000601968.5
CDS-3UTR CAA 90 bp GCCCATGGCGATGGCCGTCTTCCCCGTGCCCGGCTGGCCAGCAATAAGGACTGCCGGATCTCCGGGACTTaGGTTGTGGCTGTAACGGTT +
Preference number: 5 (lower is better)
Translates to: AHGDGRLPRARLASNKDCRISGT*VVAVTV
Trigger: AACCGTTACAGCCACAACCAAAGTCCCGGAGATCCG...GCAGTCCTTATTGCTGGCCAGCCGGGCACGGGGAAGACGGCCATCGCCATGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593570.5
ENST00000596247.5
CDS-3UTR CAA 90 bp GCTGGATGGCGTAGCGCAGTGACGTCTCCAGCCCGATGCGGGTCAGCACCGTGTATCTTGCCCGTCGCCTaGTCGATGGTGATCACGTCC +
Preference number: 5 (lower is better)
Translates to: AGWRSAVTSPARCGSAPCILPVA*SMVITS
Trigger: GGACGTGATCACCATCGACAAGGCGACGGGCAAGAT...ACACGGTGCTGACCCGCATCGGGCTGGAGACGTCACTGCGCTACGCCATCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CAA 90 bp ACTCCAGGGATGATCTCCGCCTTGCCCTCCTCGCGCCACTCAGCCACCTTGGCACCCAGCTTGGAGATCTaGCCCGTCGCCTTGTCGATG +
Preference number: 5 (lower is better)
Translates to: TPGMISALPSSRHSATLAPSLEI*PVALSM
Trigger: CATCGACAAGGCGACGGGCAAGATCTCCAAGCTGGG...TGCCAAGGTGGCTGAGTGGCGCGAGGAGGGCAAGGCGGAGATCATCCCTGGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CAA 90 bp CCGGATTCGCGTGATGCCACGGTTGGTGGCCATGATCAGGACAGGCGCCATGTCGGGCACTGCACGAACTaGGTCTGGGAGCCCATAGCG +
Preference number: 5 (lower is better)
Translates to: PDSRDATVGGHDQDRRHVGHCTN*VWEPIA
Trigger: CGCTATGGGCTCCCAGACCAAGTTCGTGCAGTGCCC...GACATGGCGCCTGTCCTGATCATGGCCACCAACCGTGGCATCACGCGAATCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CAA 90 bp CTTGCCCGTCGCCTTGTCGATGGTGATCACGTCCCCGGCCTGGACCTTGTCCTTCTCTCCAGGGCCCGGTaGAGGAAGGAGAAGCTCTCG +
Preference number: 5 (lower is better)
Translates to: LARRLVDGDHVPGLDLVLLSRAR*RKEKLS
Trigger: CGAGAGCTTCTCCTTCCTCAACCGGGCCCTGGAGAG...AAGGACAAGGTCCAGGCCGGGGACGTGATCACCATCGACAAGGCGACGGGCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596247.5
CDS-3UTR CAA 90 bp GCTGGATGGCGTAGCGCAGTGACGTCTCCAGCCCGATGCGGGTCAGCACCGTGTCGGATCTCCGGGACTTaGGTTGTGGCTGTAACGGTT +
Preference number: 5 (lower is better)
Translates to: AGWRSAVTSPARCGSAPCRISGT*VVAVTV
Trigger: AACCGTTACAGCCACAACCAAAGTCCCGGAGATCCG...ACACGGTGCTGACCCGCATCGGGCTGGAGACGTCACTGCGCTACGCCATCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CAA 90 bp GTCGATGAACAGCACTCCAGGGATGATCTCCGCCTTGCCCTCCTCGCGCCACTCCCCAGCTTGGAGATCTaGCCCGTCGCCTTGTCGATG +
Preference number: 5 (lower is better)
Translates to: VDEQHSRDDLRLALLAPLPSLEI*PVALSM
Trigger: CATCGACAAGGCGACGGGCAAGATCTCCAAGCTGGG...GAGTGGCGCGAGGAGGGCAAGGCGGAGATCATCCCTGGAGTGCTGTTCATCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CAA 90 bp CGCGTGATGCCACGGTTGGTGGCCATGATCAGGACAGGCGCCATGTCACTCTCCGTGTGCACCACCTCCTaGCGTTTCTGGAGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: RVMPRLVAMIRTGAMSLSVCTTS*RFWSSP
Trigger: TGGGGAGCTCCAGAAACGCAAGGAGGTGGTGCACAC...GGAGAGTGACATGGCGCCTGTCCTGATCATGGCCACCAACCGTGGCATCACGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CAA 90 bp CGCGTGATGCCACGGTTGGTGGCCATGATCAGGACAGGCGCCATGTCACTCTCCCGCGTGATGCCACGGTaGGTGGCCATGATCAGGACA +
Preference number: 5 (lower is better)
Translates to: RVMPRLVAMIRTGAMSLSRVMPR*VAMIRT
Trigger: TGTCCTGATCATGGCCACCAACCGTGGCATCACGCG...GGAGAGTGACATGGCGCCTGTCCTGATCATGGCCACCAACCGTGGCATCACGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CAA 90 bp AGCGCAGTGACGTCTCCAGCCCGATGCGGGTCAGCACCGTGTAGGCGTCCTCACTGCACTTCTGTACCCTaGCGTTTCCGGCACACCAAG +
Preference number: 5 (lower is better)
Translates to: SAVTSPARCGSAPCRRPHCTSVP*RFRHTK
Trigger: CTTGGTGTGCCGGAAACGCAAGGGTACAGAAGTGCA...GTGAGGACGCCTACACGGTGCTGACCCGCATCGGGCTGGAGACGTCACTGCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CAA 90 bp GCTGGATGGCGTAGCGCAGTGACGTCTCCAGCCCGATGCGGGTCAGCACCGTGTTCGCCTTTGAGTTCGTaGAAGAGGAAGGCGTCCTGG +
Preference number: 5 (lower is better)
Translates to: AGWRSAVTSPARCGSAPCSPLSS*KRKASW
Trigger: CCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGA...ACACGGTGCTGACCCGCATCGGGCTGGAGACGTCACTGCGCTACGCCATCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS CCA 90 bp TCGATCTCGTGCAGGGACACGGTGTGCACCACCTCCTTGCGTTTCTaGAGCTCCCCATCTGGGCACTGCACGAACTTGGTCTATGGGGCG +
Preference number: 5 (lower is better)
Translates to: SISCRDTVCTTSLRF*SSPSGHCTNLVYGA
Trigger: CGCCCCATAGACCAAGTTCGTGCAGTGCCCAGATGGGGAGCTCCAGAAACGCAAGGAGGTGGTGCACACCGTGTCCCTGCACGAGATCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594338.1
CDS-3UTR CAA 90 bp AAGATTTCACTGCCGGCGATGGCTGTGAATGGCGTGTCAGGGCCCAGGGCCTGCTGGAGCCCGTCCCTGTaGCTGGTCGATCAATCTGGA +
Preference number: 5 (lower is better)
Translates to: KISLPAMAVNGVSGPRACWSPSL*LVDQSG
Trigger: TCCAGATTGATCGACCAGCAACAGGGACGGGCTCCA...GCAGGCCCTGGGCCCTGACACGCCATTCACAGCCATCGCCGGCAGTGAAATCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593570.5
ENST00000596247.5
CDS-3UTR CAA 90 bp ACAGGCGCCATGTCACTCTCCAGGGCCCGGTTGAGGAAGGAGAAGCTCTCGATGGTGTGCACCACCTCCTaGCGTTTCTGGAGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: TGAMSLSRARLRKEKLSMVCTTS*RFWSSP
Trigger: TGGGGAGCTCCAGAAACGCAAGGAGGTGGTGCACAC...CATCGAGAGCTTCTCCTTCCTCAACCGGGCCCTGGAGAGTGACATGGCGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CAA 90 bp AGGCGCCATGTCACTCTCCAGGGCCCGGTTGAGGAAGGAGAAGCTCTCGATGTCCCCTGGGTGCGAGAGTaGATGACGTCGATCTCGTGC +
Preference number: 5 (lower is better)
Translates to: RRHVTLQGPVEEGEALDVPWVRE*MTSISC
Trigger: GCACGAGATCGACGTCATCAACTCTCGCACCCAGGG...GACATCGAGAGCTTCTCCTTCCTCAACCGGGCCCTGGAGAGTGACATGGCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CAA 90 bp TTCACTGCCGGCGATGGCTGTGAATGGCGTGTCAGGGCCCAGGGCCTGCGCCATCGATTCGCTCAATCCTaGTTACATCACGGATCTCCG +
Preference number: 5 (lower is better)
Translates to: FTAGDGCEWRVRAQGLRHRFAQS*LHHGSP
Trigger: CGGAGATCCGTGATGTAACAAGGATTGAGCGAATCG...ATGGCGCAGGCCCTGGGCCCTGACACGCCATTCACAGCCATCGCCGGCAGTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593570.5
ENST00000596247.5
CDS-3UTR CAA 90 bp GTGGACCTCGTCGATGAACAGCACTCCAGGGATGATCTCCGCCTTGCCCTCCTCATCTCCGTCTCCTCCTaGATGCGAACGCCGATGGAC +
Preference number: 5 (lower is better)
Translates to: VDLVDEQHSRDDLRLALLISVSS*MRTPMD
Trigger: GTCCATCGGCGTTCGCATCAAGGAGGAGACGGAGAT...GAGGAGGGCAAGGCGGAGATCATCCCTGGAGTGCTGTTCATCGACGAGGTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CAA 90 bp GATCAGGACAGGCGCCATGTCACTCTCCAGGGCCCGGTTGAGGAAGGAGAAGCTATCTCCGTCTCCTCCTaGATGCGAACGCCGATGGAC +
Preference number: 5 (lower is better)
Translates to: DQDRRHVTLQGPVEEGEAISVSS*MRTPMD
Trigger: GTCCATCGGCGTTCGCATCAAGGAGGAGACGGAGAT...AGCTTCTCCTTCCTCAACCGGGCCCTGGAGAGTGACATGGCGCCTGTCCTGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CAA 90 bp CTCCTGGGTGCAGCTAGTCTCTACTGGGTCCTCAGCTCACAAGCGGTGCTTGGCTGGAGCCCGTCCCTGTaGCTGGTCGATCAATCTGGA +
Preference number: 5 (lower is better)
Translates to: LLGAASLYWVLSSQAVLGWSPSL*LVDQSG
Trigger: TCCAGATTGATCGACCAGCAACAGGGACGGGCTCCA...GCCAAGCACCGCTTGTGAGCTGAGGACCCAGTAGAGACTAGCTGCACCCAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593570.5
CDS-3UTR CAA 90 bp CTCGTCGATGAACAGCACTCCAGGGATGATCTCCGCCTTGCCCTCCTCGCGCCATCCATCTCTGTGGTCTaGAGGGTCAGTTTGCCCACC +
Preference number: 5 (lower is better)
Translates to: LVDEQHSRDDLRLALLAPSISVV*RVSLPT
Trigger: GGTGGGCAAACTGACCCTCAAGACCACAGAGATGGA...TGGCGCGAGGAGGGCAAGGCGGAGATCATCCCTGGAGTGCTGTTCATCGACGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CAA 90 bp AGGCGCCATGTCACTCTCCAGGGCCCGGTTGAGGAAGGAGAAGCTCTCGATGTCATCTTGCCCGTCGCCTaGTCGATGGTGATCACGTCC +
Preference number: 5 (lower is better)
Translates to: RRHVTLQGPVEEGEALDVILPVA*SMVITS
Trigger: GGACGTGATCACCATCGACAAGGCGACGGGCAAGAT...GACATCGAGAGCTTCTCCTTCCTCAACCGGGCCCTGGAGAGTGACATGGCGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CAA 90 bp GTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCAAGGAGCGGCCCAGCTaGGAGATCTTGCCCGTCGCC +
Preference number: 5 (lower is better)
Translates to: VSMVSPLSSLKRKASWYSKERPS*EILPVA
Trigger: GGCGACGGGCAAGATCTCCAAGCTGGGCCGCTCCTT...GGAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR CAA 90 bp AAGAGGAAGGCGTCCTGGTACTCCTTCATGTACTGCGTGGAGCGGGACTCGTCCCCCTGGGTGCGAGAGTaGATGACGTCGATCTCGTGC +
Preference number: 5 (lower is better)
Translates to: KRKASWYSFMYCVERDSSPWVRE*MTSISC
Trigger: GCACGAGATCGACGTCATCAACTCTCGCACCCAGGG...GGACGAGTCCCGCTCCACGCAGTACATGAAGGAGTACCAGGACGCCTTCCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CAA 90 bp GTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCGGGATGATCTCCGCCTaGCCCTCCTCGCGCCACTCA +
Preference number: 5 (lower is better)
Translates to: VSMVSPLSSLKRKASWYSGMISA*PSSRHS
Trigger: TGAGTGGCGCGAGGAGGGCAAGGCGGAGATCATCCC...GGAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR CAA 90 bp GGAGGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTAGGGATGATCTCCGCCTaGCCCTCCTCGCGCCACTCA +
Preference number: 5 (lower is better)
Translates to: GGVHGLAFEFVEEEGVLVGMISA*PSSRHS
Trigger: TGAGTGGCGCGAGGAGGGCAAGGCGGAGATCATCCC...TACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR CAA 90 bp GTCGATGAACAGCACTCCAGGGATGATCTCCGCCTTGCCCTCCTCGCGCCACTCTGCACTTCTGTACCCTaGCGTTTCCGGCACACCAAG +
Preference number: 5 (lower is better)
Translates to: VDEQHSRDDLRLALLAPLCTSVP*RFRHTK
Trigger: CTTGGTGTGCCGGAAACGCAAGGGTACAGAAGTGCA...GAGTGGCGCGAGGAGGGCAAGGCGGAGATCATCCCTGGAGTGCTGTTCATCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CAA 90 bp CTCGTCGATGAACAGCACTCCAGGGATGATCTCCGCCTTGCCCTCCTCGCGCCATCGCCTTTGAGTTCGTaGAAGAGGAAGGCGTCCTGG +
Preference number: 5 (lower is better)
Translates to: LVDEQHSRDDLRLALLAPSPLSS*KRKASW
Trigger: CCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGA...TGGCGCGAGGAGGGCAAGGCGGAGATCATCCCTGGAGTGCTGTTCATCGACGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS CCA 90 bp CCATGCTCTAGGCAGCAGAGTGTGGCATGTGAGGGGAGGGCATTCTaGGCCAGATTGCCTGGGTTCAAATCCTGCCTGGCCATCTCCTTG +
Preference number: 5 (lower is better)
Translates to: PCSRQQSVACEGRAF*ARLPGFKSCLAISL
Trigger: CAAGGAGATGGCCAGGCAGGATTTGAACCCAGGCAATCTGGCCCAGAATGCCCTCCCCTCACATGCCACACTCTGCTGCCTAGAGCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595002.1
CDS-3UTR CAA 90 bp CAGGGAGAAGATTTCACTGCCGGCGATGGCTGTGAATGGCGTGTCAGGGCCCAGTCCATCTCTGTGGTCTaGAGGGTCAGTTTGCCCACC +
Preference number: 5 (lower is better)
Translates to: QGEDFTAGDGCEWRVRAQSISVV*RVSLPT
Trigger: GGTGGGCAAACTGACCCTCAAGACCACAGAGATGGA...CTGGGCCCTGACACGCCATTCACAGCCATCGCCGGCAGTGAAATCTTCTCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593570.5
ENST00000596247.5
CDS-3UTR CAA 90 bp GTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCGGGCACTGCACGAACTaGGTCTGGGAGCCCATAGCG +
Preference number: 5 (lower is better)
Translates to: VSMVSPLSSLKRKASWYSGHCTN*VWEPIA
Trigger: CGCTATGGGCTCCCAGACCAAGTTCGTGCAGTGCCC...GGAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR CAA 90 bp GGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCTCTCCAGGGCCCGGTaGAGGAAGGAGAAGCTCTCG +
Preference number: 5 (lower is better)
Translates to: GVHGLAFEFVEEEGVLVLLSRAR*RKEKLS
Trigger: CGAGAGCTTCTCCTTCCTCAACCGGGCCCTGGAGAG...GAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR CAA 90 bp GCCCCGGATTCGCGTGATGCCACGGTTGGTGGCCATGATCAGGACAGGCGCCATTCCATGGTCTCGCCTTaGAGTTCGTTGAAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: APDSRDATVGGHDQDRRHSMVSP*SSLKRK
Trigger: CTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGA...ATGGCGCCTGTCCTGATCATGGCCACCAACCGTGGCATCACGCGAATCCGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS GCA 90 bp TGTGAGGGGAGGGCATTCTGGGCCAGATTGCCTGGGTTCAAATCCTaGCTGGCCATCTCCTTGTTGTGGGCCCAGCCTCTTCATTCCTCA +
Preference number: 5 (lower is better)
Translates to: CEGRAFWARLPGFKS*LAISLLWAQPLHSS
Trigger: TGAGGAATGAAGAGGCTGGGCCCACAACAAGGAGATGGCCAGGCAGGATTTGAACCCAGGCAATCTGGCCCAGAATGCCCTCCCCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595002.1
CDS-3UTR CAA 90 bp GATTCGCGTGATGCCACGGTTGGTGGCCATGATCAGGACAGGCGCCATGTCACTCGGATCTCCGGGACTTaGGTTGTGGCTGTAACGGTT +
Preference number: 5 (lower is better)
Translates to: DSRDATVGGHDQDRRHVTRISGT*VVAVTV
Trigger: AACCGTTACAGCCACAACCAAAGTCCCGGAGATCCG...AGTGACATGGCGCCTGTCCTGATCATGGCCACCAACCGTGGCATCACGCGAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CAA 90 bp ATCCACCTGCACTTCTGTACCCTTGCGTTTCCGGCACACCAAGCTGGCAGCTGTTGGAGCCCGTCCCTGTaGCTGGTCGATCAATCTGGA +
Preference number: 5 (lower is better)
Translates to: IHLHFCTLAFPAHQAGSCWSPSL*LVDQSG
Trigger: TCCAGATTGATCGACCAGCAACAGGGACGGGCTCCA...ACAGCTGCCAGCTTGGTGTGCCGGAAACGCAAGGGTACAGAAGTGCAGGTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CAA 90 bp GTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCCCCAGCTTGGAGATCTaGCCCGTCGCCTTGTCGATG +
Preference number: 5 (lower is better)
Translates to: VSMVSPLSSLKRKASWYSPSLEI*PVALSM
Trigger: CATCGACAAGGCGACGGGCAAGATCTCCAAGCTGGG...GGAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR CAA 90 bp GGAGGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTAGTGTGCACCACCTCCTaGCGTTTCTGGAGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: GGVHGLAFEFVEEEGVLVVCTTS*RFWSSP
Trigger: TGGGGAGCTCCAGAAACGCAAGGAGGTGGTGCACAC...TACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR CAA 90 bp GGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCCCTGGGTGCGAGAGTaGATGACGTCGATCTCGTGC +
Preference number: 5 (lower is better)
Translates to: GVHGLAFEFVEEEGVLVLPWVRE*MTSISC
Trigger: GCACGAGATCGACGTCATCAACTCTCGCACCCAGGG...GAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR CAA 90 bp GAGGAAGGCGTCCTGGTACTCCTTCATGTACTGCGTGGAGCGGGACTCGTCCAGTCAGCCACCTTGGCATaGATCTGCTCACGGACTTCT +
Preference number: 5 (lower is better)
Translates to: EEGVLVLLHVLRGAGLVQSATLA*ICSRTS
Trigger: AGAAGTCCGTGAGCAGATCAATGCCAAGGTGGCTGA...CTGGACGAGTCCCGCTCCACGCAGTACATGAAGGAGTACCAGGACGCCTTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CAA 90 bp GGAGGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACGCGTGATGCCACGGTaGGTGGCCATGATCAGGACA +
Preference number: 5 (lower is better)
Translates to: GGVHGLAFEFVEEEGVLVRVMPR*VAMIRT
Trigger: TGTCCTGATCATGGCCACCAACCGTGGCATCACGCG...TACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR CAA 90 bp GGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCGCGTGATGCCACGGTaGGTGGCCATGATCAGGACA +
Preference number: 5 (lower is better)
Translates to: GVHGLAFEFVEEEGVLVLRVMPR*VAMIRT
Trigger: TGTCCTGATCATGGCCACCAACCGTGGCATCACGCG...GAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS TCA 90 bp GTACTCCTTCATGTACTGCGTGGAGCGGGACTCGTCCAGGAAGAGTaGGTAGACCCGCTTGATGTCATCCACCTGCACTTCTGTACCCGG +
Preference number: 5 (lower is better)
Translates to: VLLHVLRGAGLVQEE*VDPLDVIHLHFCTR
Trigger: CCGGGTACAGAAGTGCAGGTGGATGACATCAAGCGGGTCTACTCACTCTTCCTGGACGAGTCCCGCTCCACGCAGTACATGAAGGAGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601968.5
CDS CCA 90 bp AGGGGAGGGCATTCTGGGCCAGATTGCCTGGGTTCAAATCCTGCCTaGCCATCTCCTTGTTGTGGGCCCAGCCTCTTCATTCCTCAGTTT +
Preference number: 5 (lower is better)
Translates to: RGGHSGPDCLGSNPA*PSPCCGPSLFIPQF
Trigger: AAACTGAGGAATGAAGAGGCTGGGCCCACAACAAGGAGATGGCCAGGCAGGATTTGAACCCAGGCAATCTGGCCCAGAATGCCCTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595002.1
CDS CCA 90 bp AAATGGCTCGAAGCGCAAGGTCCTACAACCCTCCTCATCACACACTaGCGCCAAGGACTGCGGAACCGGCCGTTGCGCCAAGATGATTTT +
Preference number: 5 (lower is better)
Translates to: KWLEAQGPTTLLITH*RQGLRNRPLRQDDF
Trigger: AAAATCATCTTGGCGCAACGGCCGGTTCCGCAGTCCTTGGCGCCAGTGTGTGATGAGGAGGGTTGTAGGACCTTGCGCTTCGAGCCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595811.5
CDS-3UTR CAA 90 bp AGGCGCCATGTCACTCTCCAGGGCCCGGTTGAGGAAGGAGAAGCTCTCGATGTCCGATTCGCTCAATCCTaGTTACATCACGGATCTCCG +
Preference number: 5 (lower is better)
Translates to: RRHVTLQGPVEEGEALDVRFAQS*LHHGSP
Trigger: CGGAGATCCGTGATGTAACAAGGATTGAGCGAATCG...GACATCGAGAGCTTCTCCTTCCTCAACCGGGCCCTGGAGAGTGACATGGCGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CAA 90 bp GGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCATCTCCGTCTCCTCCTaGATGCGAACGCCGATGGAC +
Preference number: 5 (lower is better)
Translates to: GVHGLAFEFVEEEGVLVLISVSS*MRTPMD
Trigger: GTCCATCGGCGTTCGCATCAAGGAGGAGACGGAGAT...GAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR CAA 90 bp GTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCTGGAGCCCGTCCCTGTaGCTGGTCGATCAATCTGGA +
Preference number: 5 (lower is better)
Translates to: VSMVSPLSSLKRKASWYSWSPSL*LVDQSG
Trigger: TCCAGATTGATCGACCAGCAACAGGGACGGGCTCCA...GGAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR CAA 90 bp GTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCATCTTGCCCGTCGCCTaGTCGATGGTGATCACGTCC +
Preference number: 5 (lower is better)
Translates to: VSMVSPLSSLKRKASWYSILPVA*SMVITS
Trigger: GGACGTGATCACCATCGACAAGGCGACGGGCAAGAT...GGAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR CAA 90 bp ATGATCAGGACAGGCGCCATGTCACTCTCCAGGGCCCGGTTGAGGAAGGAGAAGTCACGGACTTCTGACTaGATCTCCCCTGTGTCACCT +
Preference number: 5 (lower is better)
Translates to: MIRTGAMSLSRARLRKEKSRTSD*ISPVSP
Trigger: AGGTGACACAGGGGAGATCAAGTCAGAAGTCCGTGA...CTTCTCCTTCCTCAACCGGGCCCTGGAGAGTGACATGGCGCCTGTCCTGATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CAA 90 bp GTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCCGGATCTCCGGGACTTaGGTTGTGGCTGTCAACTGC +
Preference number: 5 (lower is better)
Translates to: VSMVSPLSSLKRKASWYSRISGT*VVAVNC
Trigger: GCAGTTGACAGCCACAACCAAAGTCCCGGAGATCCG...GGAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601968.5
CDS TCA 90 bp GTACTCCTTCATGTACTGCGTGGAGCGGGACTCGTCCAGGAAGAGTaGGTAGACCCGCTTGATGTCATCCACCTGCACTTCTGTACCCTG +
Preference number: 5 (lower is better)
Translates to: VLLHVLRGAGLVQEE*VDPLDVIHLHFCTL
Trigger: CAGGGTACAGAAGTGCAGGTGGATGACATCAAGCGGGTCTACTCACTCTTCCTGGACGAGTCCCGCTCCACGCAGTACATGAAGGAGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595002.1
CDS GCA 90 bp CGCAAGGTCCTACAACCCTCCTCATCACACACTGGCGCCAAGGACTaGGGAACCGGCCGTTGCGCCAAGATGATTTTGAAAGTTGGAGTT +
Preference number: 5 (lower is better)
Translates to: RKVLQPSSSHTGAKD*GTGRCAKMILKVGV
Trigger: AACTCCAACTTTCAAAATCATCTTGGCGCAACGGCCGGTTCCGCAGTCCTTGGCGCCAGTGTGTGATGAGGAGGGTTGTAGGACCTTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595811.5
CDS-3UTR CAA 90 bp GGAGGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTATCCATCTCTGTGGTCTaGAGGGTCAGTTTGCCCACC +
Preference number: 5 (lower is better)
Translates to: GGVHGLAFEFVEEEGVLVSISVV*RVSLPT
Trigger: GGTGGGCAAACTGACCCTCAAGACCACAGAGATGGA...TACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR CAA 90 bp ATCTCCAGGGAGAAGATTTCACTGCCGGCGATGGCTGTGAATGGCGTGTCAGGGTCACGGACTTCTGACTaGATCTCCCCTGTGTCACCT +
Preference number: 5 (lower is better)
Translates to: ISREKISLPAMAVNGVSGSRTSD*ISPVSP
Trigger: AGGTGACACAGGGGAGATCAAGTCAGAAGTCCGTGA...CCCTGACACGCCATTCACAGCCATCGCCGGCAGTGAAATCTTCTCCCTGGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596247.5
CDS-3UTR CAA 90 bp GTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCTCGCCTTTGAGTTCGTaGAAGAGGAAGGCGTCCTGG +
Preference number: 5 (lower is better)
Translates to: VSMVSPLSSLKRKASWYSSPLSS*KRKASW
Trigger: CCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGA...GGAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR CAA 90 bp GGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCTCTCCGGGACTTTGGTaGTGGCTGTCAACTGCCAGA +
Preference number: 5 (lower is better)
Translates to: GVHGLAFEFVEEEGVLVLSPGLW*WLSTAR
Trigger: TCTGGCAGTTGACAGCCACAACCAAAGTCCCGGAGA...GAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601968.5
CDS-3UTR CAA 90 bp GGATGTGGGAGTGGGCACCGATTCGCTCAATCCTTGTTACATCACGGATCTCCGGCCTGTGCTTCCAGCTaGGAACTCAAGTGCCATTGG +
Preference number: 5 (lower is better)
Translates to: GCGSGHRFAQSLLHHGSPACASS*ELKCHW
Trigger: CCAATGGCACTTGAGTTCCAAGCTGGAAGCACAGGC...CGGAGATCCGTGATGTAACAAGGATTGAGCGAATCGGTGCCCACTCCCACATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595811.5
CDS-3UTR CAA 90 bp GGTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCTCACGGACTTCTGACTaGATCTCCCCTGTGTCACCT +
Preference number: 5 (lower is better)
Translates to: GVHGLAFEFVEEEGVLVLSRTSD*ISPVSP
Trigger: AGGTGACACAGGGGAGATCAAGTCAGAAGTCCGTGA...GAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR CAA 90 bp GTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCTCAGCCACCTTGGCATaGATCTGCTCACGGACTTCT +
Preference number: 5 (lower is better)
Translates to: VSMVSPLSSLKRKASWYSSATLA*ICSRTS
Trigger: AGAAGTCCGTGAGCAGATCAATGCCAAGGTGGCTGA...GGAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS TCA 90 bp ACCACCGCCCCGCTCAGGCCGATTGCAAAATTCTTAGCTGTTCTTTaGGTAACCACACGTCCTCCACGCTCCTTTCCTCTTTATCCCACC +
Preference number: 5 (lower is better)
Translates to: TTAPLRPIAKFLAVL*VTTRPPRSFPLYPT
Trigger: GGTGGGATAAAGAGGAAAGGAGCGTGGAGGACGTGTGGTTACTCAAAGAACAGCTAAGAATTTTGCAATCGGCCTGAGCGGGGCGGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601968.5
CDS-3UTR CAA 90 bp CACATCTTCTTCCTCGCACCGGATGCGGAGGATCTGCTTCGTGTCTTTCTCGCTTCCATGGTCTCGCCTTaGAGTTCGTTGAAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: HIFFLAPDAEDLLRVFLASMVSP*SSLKRK
Trigger: CTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGA...AGCGAGAAAGACACGAAGCAGATCCTCCGCATCCGGTGCGAGGAAGAAGATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221413.10
ENST00000596247.5
CDS-3UTR CAA 90 bp GTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCTCCATGGTCTCGCCTTaGAGTTCGTTGAAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: VSMVSPLSSLKRKASWYSSMVSP*SSLKRK
Trigger: CTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGA...GGAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221413.10
ENST00000596247.5
ENST00000601968.5
CDS-3UTR CAA 90 bp TGGGCACCGATTCGCTCAATCCTTGTTACATCACGGATCTCCGGGACTTTGGTTCTGCGGAACCGGCCGTaGCGCCAAGATGATTTTGAA +
Preference number: 5 (lower is better)
Translates to: WAPIRSILVTSRISGTLVLRNRP*RQDDFE
Trigger: TTCAAAATCATCTTGGCGCAACGGCCGGTTCCGCAG...AACCAAAGTCCCGGAGATCCGTGATGTAACAAGGATTGAGCGAATCGGTGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595811.5
CDS TCA 90 bp ATGAGCCACCACGCCAGGCCAAAATCGCTTCTTTATTCAGGTAATTaGGCAGGTGCCAGGCCAAGTTTCCTGGCCTCTCCTTCATTCACA +
Preference number: 5 (lower is better)
Translates to: MSHHARPKSLLYSGN*AGARPSFLASPSFT
Trigger: TGTGAATGAAGGAGAGGCCAGGAAACTTGGCCTGGCACCTGCTCAATTACCTGAATAAAGAAGCGATTTTGGCCTGGCGTGGTGGCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598768.1
CDS-3UTR CAA 90 bp GTGTCCATGGTCTCGCCTTTGAGTTCGTTGAAGAGGAAGGCGTCCTGGTACTCCATTCTTAGCTGTTCTTaGAGTAACCACACGTCCTCC +
Preference number: 5 (lower is better)
Translates to: VSMVSPLSSLKRKASWYSILSCS*SNHTSS
Trigger: GGAGGACGTGTGGTTACTCAAAGAACAGCTAAGAAT...GGAGTACCAGGACGCCTTCCTCTTCAACGAACTCAAAGGCGAGACCATGGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601968.5
CDS-3UTR CAA 90 bp AGTGGGCACCGATTCGCTCAATCCTTGTTACATCACGGATCTCCGGGACTTTGGGGAACTCAAGTGCCATaGGCACCACTAACAATCCAA +
Preference number: 5 (lower is better)
Translates to: SGHRFAQSLLHHGSPGLWGTQVP*APLTIQ
Trigger: TTGGATTGTTAGTGGTGCCAATGGCACTTGAGTTCC...CCAAAGTCCCGGAGATCCGTGATGTAACAAGGATTGAGCGAATCGGTGCCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595811.5
CDS-3UTR CAA 90 bp TGGGCACCGATTCGCTCAATCCTTGTTACATCACGGATCTCCGGGACTTTGGTTTGCGCCAAGATGATTTaGAAAGTTGGAGTTCAACGG +
Preference number: 5 (lower is better)
Translates to: WAPIRSILVTSRISGTLVCAKMI*KVGVQR
Trigger: CCGTTGAACTCCAACTTTCAAAATCATCTTGGCGCA...AACCAAAGTCCCGGAGATCCGTGATGTAACAAGGATTGAGCGAATCGGTGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595811.5
CDS CCA 72 bp GGGACTTTATGCCCCGCCCTCCCACCGAGGCTGCGCTaGAAGACGGGCGTCCGGAACTCCTGGGTCCATTCC +
Preference number: 6 (lower is better)
Translates to: GTLCPALPPRLR*KTGVRNSWVHS
Trigger: GGAATGGACCCAGGAGTTCCGGACGCCCGTCTTCCAGCGCAGCCTCGGTGGGAGGGCGGGGCATAAAGTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596837.5
ENST00000601968.5
CDS CCA 72 bp CTTCTGTACCCTGGAGGGGGAGGGCGAGTCCTCAGTTaGGCCCCTCTCCGTGAGGCTCAAGGCACAGACCCC +
Preference number: 6 (lower is better)
Translates to: LLYPGGGGRVLS*APLREAQGTDP
Trigger: GGGGTCTGTGCCTTGAGCCTCACGGAGAGGGGCCCAACTGAGGACTCGCCCTCCCCCTCCAGGGTACAGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595002.1
CDS CCA 72 bp CCGAGGCTGCGCTGGAAGACGGGCGTCCGGAACTCCTaGGTCCATTCCCAATGTCTCCTGGCTCCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: PRLRWKTGVRNS*VHSQCLLAPPP
Trigger: AGGAGGAGGAGCCAGGAGACATTGGGAATGGACCCAGGAGTTCCGGACGCCCGTCTTCCAGCGCAGCCTCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596837.5
ENST00000601968.5
CDS TCA 72 bp CAGGAGGTAGTCAGGACTAGGGACATTCCAGAGCGCTaGGGGTCACGGGGGCTCCCGGAGGACCTTAGAAGC +
Preference number: 6 (lower is better)
Translates to: QEVVRTRDIPER*GSRGLPEDLRS
Trigger: GCTTCTAAGGTCCTCCGGGAGCCCCCGTGACCCTCAGCGCTCTGGAATGTCCCTAGTCCTGACTACCTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594338.1
CDS CCA 72 bp ACCCGCTTGATGTCATCCACCTGCACTTCTGTACCCTaGAGGGGGAGGGCGAGTCCTCAGTTGGGCCCCTCT +
Preference number: 6 (lower is better)
Translates to: TRLMSSTCTSVP*RGRASPQLGPS
Trigger: AGAGGGGCCCAACTGAGGACTCGCCCTCCCCCTCCAGGGTACAGAAGTGCAGGTGGATGACATCAAGCGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595002.1
CDS CCA 72 bp GAAGCGCAAGGTCCTACAACCCTCCTCATCACACACTaGCGCCAAGGACTGCGGAACCGGCCGTTGCGCCAA +
Preference number: 6 (lower is better)
Translates to: EAQGPTTLLITH*RQGLRNRPLRQ
Trigger: TTGGCGCAACGGCCGGTTCCGCAGTCCTTGGCGCCAGTGTGTGATGAGGAGGGTTGTAGGACCTTGCGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595811.5
CDS GCA 72 bp CCTCTCCGTGAGGCTCAAGGCACAGACCCCAGCGTATaGCACCTCCATGCTCTAGGCAGCAGAGTGTGGCAT +
Preference number: 6 (lower is better)
Translates to: PLREAQGTDPSV*HLHALGSRVWH
Trigger: ATGCCACACTCTGCTGCCTAGAGCATGGAGGTGGCATACGCTGGGGTCTGTGCCTTGAGCCTCACGGAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595002.1
CDS CCA 72 bp AGGCAGCAGAGTGTGGCATGTGAGGGGAGGGCATTCTaGGCCAGATTGCCTGGGTTCAAATCCTGCCTGGCC +
Preference number: 6 (lower is better)
Translates to: RQQSVACEGRAF*ARLPGFKSCLA
Trigger: GGCCAGGCAGGATTTGAACCCAGGCAATCTGGCCCAGAATGCCCTCCCCTCACATGCCACACTCTGCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595002.1
CDS TCA 72 bp CCATGCCTTGCGAAGCCTGTGGGTGGGAGGCGCACATaGGGTGATTTCCTGTGGGGCTACCATGGCATTTCT +
Preference number: 6 (lower is better)
Translates to: PCLAKPVGGRRT*GDFLWGYHGIS
Trigger: AGAAATGCCATGGTAGCCCCACAGGAAATCACCTCATGTGCGCCTCCCACCCACAGGCTTCGCAAGGCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596247.5
CDS GCA 72 bp AGGGCATTCTGGGCCAGATTGCCTGGGTTCAAATCCTaGCTGGCCATCTCCTTGTTGTGGGCCCAGCCTCTT +
Preference number: 6 (lower is better)
Translates to: RAFWARLPGFKS*LAISLLWAQPL
Trigger: AAGAGGCTGGGCCCACAACAAGGAGATGGCCAGGCAGGATTTGAACCCAGGCAATCTGGCCCAGAATGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595002.1
CDS CCA 72 bp GACTGGAGCTCCAGGAAATGGAGCTGGGAGGCTAAATaGGGTCATCTGGAAACCCCAGGCCCAGGAGGTAGT +
Preference number: 6 (lower is better)
Translates to: DWSSRKWSWEAK*GHLETPGPGGS
Trigger: ACTACCTCCTGGGCCTGGGGTTTCCAGATGACCCCATTTAGCCTCCCAGCTCCATTTCCTGGAGCTCCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594338.1
CDS CAA 90 bp ACCCTCCTCATCACACACTGGCGCCAAGGACTGCGGAACCGGCCGTaGCGCCAAGATGATTTTGAAAGTTGGAGTTCAACGGTTGCCATG +
Preference number: 6 (lower is better)
Translates to: TLLITHWRQGLRNRP*RQDDFESWSSTVAM
Trigger: CATGGCAACCGTTGAACTCCAACTTTCAAAATCATCTTGGCGCAACGGCCGGTTCCGCAGTCCTTGGCGCCAGTGTGTGATGAGGAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595811.5
CDS CAA 90 bp CACCACCACACCTGCCTGTGCTTCCAGCTTGGAACTCAAGTGCCATaGGCACCACTAACAATCCAAGGCTCCCAAATGGCTCGAAGCGCA +
Preference number: 6 (lower is better)
Translates to: HHHTCLCFQLGTQVP*APLTIQGSQMARSA
Trigger: TGCGCTTCGAGCCATTTGGGAGCCTTGGATTGTTAGTGGTGCCAATGGCACTTGAGTTCCAAGCTGGAAGCACAGGCAGGTGTGGTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595811.5
CDS GCA 72 bp TCACACACTGGCGCCAAGGACTGCGGAACCGGCCGTTaGGCCAAGATGATTTTGAAAGTTGGAGTTCAACGG +
Preference number: 6 (lower is better)
Translates to: SHTGAKDCGTGR*AKMILKVGVQR
Trigger: CCGTTGAACTCCAACTTTCAAAATCATCTTGGCGCAACGGCCGGTTCCGCAGTCCTTGGCGCCAGTGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595811.5
CDS GCA 72 bp CTACAACCCTCCTCATCACACACTGGCGCCAAGGACTaGGGAACCGGCCGTTGCGCCAAGATGATTTTGAAA +
Preference number: 6 (lower is better)
Translates to: LQPSSSHTGAKD*GTGRCAKMILK
Trigger: TTTCAAAATCATCTTGGCGCAACGGCCGGTTCCGCAGTCCTTGGCGCCAGTGTGTGATGAGGAGGGTTGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595811.5
CDS CCA 72 bp CATTCTGGGCCAGATTGCCTGGGTTCAAATCCTGCCTaGCCATCTCCTTGTTGTGGGCCCAGCCTCTTCATT +
Preference number: 6 (lower is better)
Translates to: HSGPDCLGSNPA*PSPCCGPSLFI
Trigger: AATGAAGAGGCTGGGCCCACAACAAGGAGATGGCCAGGCAGGATTTGAACCCAGGCAATCTGGCCCAGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595002.1
CDS CCA 72 bp AGGCCTGCACCACCACACCTGCCTGTGCTTCCAGCTTaGAACTCAAGTGCCATTGGCACCACTAACAATCCA +
Preference number: 6 (lower is better)
Translates to: RPAPPHLPVLPA*NSSAIGTTNNP
Trigger: TGGATTGTTAGTGGTGCCAATGGCACTTGAGTTCCAAGCTGGAAGCACAGGCAGGTGTGGTGGTGCAGGCCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595811.5
CDS CAA 72 bp CGCTCAATCCTTGTTACATCACGGATCTCCGGGACTTaGGTTGTGGCTGTCAACTGCCAGAGTCCTAGCGGA +
Preference number: 6 (lower is better)
Translates to: RSILVTSRISGT*VVAVNCQSPSG
Trigger: TCCGCTAGGACTCTGGCAGTTGACAGCCACAACCAAAGTCCCGGAGATCCGTGATGTAACAAGGATTGAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601968.5
CDS CAA 72 bp ATCACACACTGGCGCCAAGGACTGCGGAACCGGCCGTaGCGCCAAGATGATTTTGAAAGTTGGAGTTCAACG +
Preference number: 6 (lower is better)
Translates to: ITHWRQGLRNRP*RQDDFESWSST
Trigger: CGTTGAACTCCAACTTTCAAAATCATCTTGGCGCAACGGCCGGTTCCGCAGTCCTTGGCGCCAGTGTGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595811.5
CDS CAA 90 bp CACCACCGCCCCGCTCAGGCCGATTGCAAAATTCTTAGCTGTTCTTaGAGTAACCACACGTCCTCCACGCTCCTTTCCTCTTTATCCCAC +
Preference number: 6 (lower is better)
Translates to: HHRPAQADCKILSCS*SNHTSSTLLSSLSH
Trigger: GTGGGATAAAGAGGAAAGGAGCGTGGAGGACGTGTGGTTACTCAAAGAACAGCTAAGAATTTTGCAATCGGCCTGAGCGGGGCGGTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601968.5
CDS TCA 72 bp CACGCCAGGCCAAAATCGCTTCTTTATTCAGGTAATTaGGCAGGTGCCAGGCCAAGTTTCCTGGCCTCTCCT +
Preference number: 6 (lower is better)
Translates to: HARPKSLLYSGN*AGARPSFLASP
Trigger: AGGAGAGGCCAGGAAACTTGGCCTGGCACCTGCTCAATTACCTGAATAAAGAAGCGATTTTGGCCTGGCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598768.1
CDS CAA 72 bp CGCTCAATCCTTGTTACATCACGGATCTCCGGGACTTaGGTTGTGGCTGTAACGGTTGCCATGATGCTCACC +
Preference number: 6 (lower is better)
Translates to: RSILVTSRISGT*VVAVTVAMMLT
Trigger: GGTGAGCATCATGGCAACCGTTACAGCCACAACCAAAGTCCCGGAGATCCGTGATGTAACAAGGATTGAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000221413.10
ENST00000594017.5
ENST00000595090.6
ENST00000596247.5
CDS TCA 72 bp CCGCTCAGGCCGATTGCAAAATTCTTAGCTGTTCTTTaGGTAACCACACGTCCTCCACGCTCCTTTCCTCTT +
Preference number: 6 (lower is better)
Translates to: PLRPIAKFLAVL*VTTRPPRSFPL
Trigger: AAGAGGAAAGGAGCGTGGAGGACGTGTGGTTACTCAAAGAACAGCTAAGAATTTTGCAATCGGCCTGAGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601968.5