RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RUVBL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000175792, ENSG00000284901

Ensembl transcript IDs: ENST00000322623.10, ENST00000464873.5, ENST00000472125.5, ENST00000478243.1, ENST00000478892.1, ENST00000480616.1, ENST00000582176.1, ENST00000585057.5, ENST00000643444.2, ENST00000643535.1, ENST00000643698.1, ENST00000643930.1, ENST00000645975.1, ENST00000646055.1, ENST00000646091.1, ENST00000646581.1

Found 685 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAACAGGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTaGTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGT +
Preference number: 1 (lower is better)
Translates to: QQEWNLKVLSSHFSI*WPHAQTRSEPFGRR
Trigger: ACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCATTCCTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
3UTR CCA 90 bp CAGGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTaGCCACACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCT +
Preference number: 1 (lower is better)
Translates to: QEWNLKVLSSHFSIC*PHAQTRSEPFGRRS
Trigger: AGAACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCATTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
3UTR TCA 90 bp GAGCCCTTCGGGAGGCGTTCTACCGCCAGAATCTTCCCAACCTCATaGATCTCATCGCCACCATCTTTGTCTTTGCAGTGGTCATCTATT +
Preference number: 1 (lower is better)
Translates to: EPFGRRSTARIFPTS*ISSPPSLSLQWSSI
Trigger: AATAGATGACCACTGCAAAGACAAAGATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAACGCCTCCCGAAGGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
3UTR GCA 90 bp ATGGAGCAGTTAGGTAAGGAAGGGCAAAGTCCAGGTGACCTTAGATaGTGCCACAGCACTCTTCAGTCTGCACAGTCCTCAGTACAACTA +
Preference number: 1 (lower is better)
Translates to: MEQLGKEGQSPGDLR*CHSTLQSAQSSVQL
Trigger: TAGTTGTACTGAGGACTGTGCAGACTGAAGAGTGCTGTGGCAGCATCTAAGGTCACCTGGACTTTGCCCTTCCTTACCTAACTGCTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
3UTR CCA 90 bp CATCTATTTCCAGGTGTGTCCAGATCCAACCCCAGGGAGTTTCCATaGTCTGGATTTAAGTTTCAGAATGCCTTGTGTGCAGTCCCCCAC +
Preference number: 1 (lower is better)
Translates to: HLFPGVSRSNPREFP*SGFKFQNALCAVPH
Trigger: GTGGGGGACTGCACACAAGGCATTCTGAAACTTAAATCCAGACCATGGAAACTCCCTGGGGTTGGATCTGGACACACCTGGAAATAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
3UTR CCA 90 bp GAAACGATGAGATGGTATTTGAAGGCAGCAGGTTTCCAGATGAGCTaGACAAGCATGTTCATTGAGTCATGGGACCTGCCAGGCTGTGGT +
Preference number: 1 (lower is better)
Translates to: ETMRWYLKAAGFQMS*TSMFIESWDLPGCG
Trigger: ACCACAGCCTGGCAGGTCCCATGACTCAATGAACATGCTTGTCCAGCTCATCTGGAAACCTGCTGCCTTCAAATACCATCTCATCGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
3UTR TCA 90 bp TGTGCAGTCCCCCACTCTGTGGGGTGCACTGTCATCATATTGTGTTaGAACGATGAGATGGTATTTGAAGGCAGCAGGTTTCCAGATGAG +
Preference number: 1 (lower is better)
Translates to: CAVPHSVGCTVIILC*NDEMVFEGSRFPDE
Trigger: CTCATCTGGAAACCTGCTGCCTTCAAATACCATCTCATCGTTTCAACACAATATGATGACAGTGCACCCCACAGAGTGGGGGACTGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
3UTR TCA 90 bp CGTTCCTTCATATATGTCTCCTCCTCTGCCAACAGGAATGGAATTTaGAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCAC +
Preference number: 1 (lower is better)
Translates to: RSFIYVSSSANRNGI*RCYHRTFPSAGHTH
Trigger: GTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCATTCCTGTTGGCAGAGGAGGAGACATATATGAAGGAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
3UTR GCA 90 bp GAATCTTCCCAACCTCATGAATCTCATCGCCACCATCTTTGTCTTTaGAGTGGTCATCTATTTCCAGGTGTGTCCAGATCCAACCCCAGG +
Preference number: 1 (lower is better)
Translates to: ESSQPHESHRHHLCL*SGHLFPGVSRSNPR
Trigger: CCTGGGGTTGGATCTGGACACACCTGGAAATAGATGACCACTGCAAAGACAAAGATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
3UTR CCA 90 bp GCCTGTTCGTTCCTTCATATATGTCTCCTCCTCTGCCAACAGGAATaGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCA +
Preference number: 1 (lower is better)
Translates to: ACSFLHICLLLCQQE*NLKVLSSHFSICWP
Trigger: TGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCATTCCTGTTGGCAGAGGAGGAGACATATATGAAGGAACGAACAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
3UTR CCA 90 bp ACTCTGTGGGGTGCACTGTCATCATATTGTGTTGAAACGATGAGATaGTATTTGAAGGCAGCAGGTTTCCAGATGAGCTGGACAAGCATG +
Preference number: 1 (lower is better)
Translates to: TLWGALSSYCVETMR*YLKAAGFQMSWTSM
Trigger: CATGCTTGTCCAGCTCATCTGGAAACCTGCTGCCTTCAAATACCATCTCATCGTTTCAACACAATATGATGACAGTGCACCCCACAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
3UTR CCA 90 bp CTGGATTTAAGTTTCAGAATGCCTTGTGTGCAGTCCCCCACTCTGTaGGGTGCACTGTCATCATATTGTGTTGAAACGATGAGATGGTAT +
Preference number: 1 (lower is better)
Translates to: LDLSFRMPCVQSPTL*GALSSYCVETMRWY
Trigger: ATACCATCTCATCGTTTCAACACAATATGATGACAGTGCACCCCACAGAGTGGGGGACTGCACACAAGGCATTCTGAAACTTAAATCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
3UTR GCA 90 bp TCCTCTTTTTATTTGTCTGCTAAGAAGGCTAGAAGCAAATTGAGTTaGCTGTTCGTTCCTTCATATATGTCTCCTCCTCTGCCAACAGGA +
Preference number: 1 (lower is better)
Translates to: SSFYLSAKKARSKLS*LFVPSYMSPPLPTG
Trigger: TCCTGTTGGCAGAGGAGGAGACATATATGAAGGAACGAACAGGCAACTCAATTTGCTTCTAGCCTTCTTAGCAGACAAATAAAAAGAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
3UTR-3UTR TCA 90 bp GGCCACACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCCAGAACAGCAGGTTTCCAGATaGGCTGGACAAGCATGTTCA +
Preference number: 2 (lower is better)
Translates to: GHTHRQGPSPSGGVLPPEQQVSR*AGQACS
Trigger: TGAACATGCTTGTCCAGCTCATCTGGAAACCTGCTG...TTCTGGCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
3UTR-3UTR GCA 90 bp CTGCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCCACCATCTTTGTCTTTaGAGTGGTCATCTATTTCCA +
Preference number: 2 (lower is better)
Translates to: LLATRTDKVRALREAFYRHHLCL*SGHLFP
Trigger: TGGAAATAGATGACCACTGCAAAGACAAAGATGGTG...GCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
3UTR-3UTR GCA 90 bp CATCGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGGGTGACCTTAGATGCTaGCACAGCACTCTTCAGTCT +
Preference number: 2 (lower is better)
Translates to: HRTFPSAGHTHRQGPSPSGDLRC*HSTLQS
Trigger: AGACTGAAGAGTGCTGTGGCAGCATCTAAGGTCACC...CGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
3UTR-3UTR CCA 90 bp CTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGCCCAGGGAGTTTCCATaGTCTGGATTTAAGTTTCAG +
Preference number: 2 (lower is better)
Translates to: LFHLLATRTDKVRALREAPREFP*SGFKFQ
Trigger: CTGAAACTTAAATCCAGACCATGGAAACTCCCTGGG...CGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
3UTR-3UTR GCA 90 bp CGGGAGGCGTTCTACCGCCAGAATCTTCCCAACCTCATGAATCTCATCGCCACCCCCCACTCTGTGGGGTaGACTGTCATCATATTGTGT +
Preference number: 2 (lower is better)
Translates to: REAFYRQNLPNLMNLIATPHSVG*TVIILC
Trigger: ACACAATATGATGACAGTGCACCCCACAGAGTGGGG...GGTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAACGCCTCCCG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
3UTR-3UTR CCA 90 bp GACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCCAGAATCTTCCCAACCTCGGTTTCCAGATGAGCTaGACAAGCATGTTCATTGAG +
Preference number: 2 (lower is better)
Translates to: DKVRALREAFYRQNLPNLGFQMS*TSMFIE
Trigger: CTCAATGAACATGCTTGTCCAGCTCATCTGGAAACC...GAGGTTGGGAAGATTCTGGCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
3UTR-3UTR GCA 90 bp TCATCTATTTCCAGGTGTGTCCAGATCCAACCCCAGGGAGTTTCCATGGTCTGGTCAGAATGCCTTGTGTaGAGTCCCCCACTCTGTGGG +
Preference number: 2 (lower is better)
Translates to: SSISRCVQIQPQGVSMVWSECLV*SPPLCG
Trigger: CCCACAGAGTGGGGGACTGCACACAAGGCATTCTGA...CCAGACCATGGAAACTCCCTGGGGTTGGATCTGGACACACCTGGAAATAGATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
3UTR-3UTR CCA 90 bp GCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCGAGCCCCCAGGGAGTTTCCATaGTCTGGATTTAAGTTTCAG +
Preference number: 2 (lower is better)
Translates to: AIIALFHLLATRTDKVRAPREFP*SGFKFQ
Trigger: CTGAAACTTAAATCCAGACCATGGAAACTCCCTGGG...GGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
3UTR-3UTR TCA 90 bp AAAGTCCAGGTGACCTTAGATGCTGCCACAGCACTCTTCAGTCTGCACAGTCCTCAGCAGGTTTCCAGATaGGCTGGACAAGCATGTTCA +
Preference number: 2 (lower is better)
Translates to: KVQVTLDAATALFSLHSPQQVSR*AGQACS
Trigger: TGAACATGCTTGTCCAGCTCATCTGGAAACCTGCTG...AGGACTGTGCAGACTGAAGAGTGCTGTGGCAGCATCTAAGGTCACCTGGACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
3UTR-3UTR GCA 90 bp ATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACATCAGAATGCCTTGTGTaGAGTCCCCCACTCTGTGGG +
Preference number: 2 (lower is better)
Translates to: MEFEGAIIALFHLLATRTSECLV*SPPLCG
Trigger: CCCACAGAGTGGGGGACTGCACACAAGGCATTCTGA...TGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
3UTR-3UTR GCA 90 bp GGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCCCAGGTGACCTTAGATaGTGCCACAGCACTCTTCAG +
Preference number: 2 (lower is better)
Translates to: GMEFEGAIIALFHLLATRPGDLR*CHSTLQ
Trigger: CTGAAGAGTGCTGTGGCAGCATCTAAGGTCACCTGG...GCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
3UTR-3UTR GCA 90 bp TTGTCTTTGCAGTGGTCATCTATTTCCAGGTGTGTCCAGATCCAACCCCAGGGACCCCACTCTGTGGGGTaGACTGTCATCATATTGTGT +
Preference number: 2 (lower is better)
Translates to: LSLQWSSISRCVQIQPQGPHSVG*TVIILC
Trigger: ACACAATATGATGACAGTGCACCCCACAGAGTGGGG...TCCCTGGGGTTGGATCTGGACACACCTGGAAATAGATGACCACTGCAAAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
3UTR-3UTR GCA 90 bp GAAACGATGAGATGGTATTTGAAGGCAGCAGGTTTCCAGATGAGCTGGACAAGCCCAGGTGACCTTAGATaGTGCCACAGCACTCTTCAG +
Preference number: 2 (lower is better)
Translates to: ETMRWYLKAAGFQMSWTSPGDLR*CHSTLQ
Trigger: CTGAAGAGTGCTGTGGCAGCATCTAAGGTCACCTGG...GCTTGTCCAGCTCATCTGGAAACCTGCTGCCTTCAAATACCATCTCATCGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
3UTR-3UTR CCA 90 bp CTTCCCAACCTCATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTGGTCATCCACTTTTCCATCTGCTaGCCACACGCACAGACAAGG +
Preference number: 2 (lower is better)
Translates to: LPNLMNLIATIFVFAVVIHFSIC*PHAQTR
Trigger: CCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTG...GATGACCACTGCAAAGACAAAGATGGTGGCGATGAGATTCATGAGGTTGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
3UTR-3UTR TCA 90 bp TCTCATCGCCACCATCTTTGTCTTTGCAGTGGTCATCTATTTCCAGGTGTGTCCCAGACAACAGACAAATaGGCATGGCCGTGTTCCTAC +
Preference number: 2 (lower is better)
Translates to: SHRHHLCLCSGHLFPGVSQTTDK*AWPCSY
Trigger: GTAGGAACACGGCCATGCTCATTTGTCTGTTGTCTG...GGACACACCTGGAAATAGATGACCACTGCAAAGACAAAGATGGTGGCGATGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
3UTR-3UTR GCA 90 bp CGCCACCATCTTTGTCTTTGCAGTGGTCATCTATTTCCAGGTGTGTCCAGATCCCAGCACTCTTCAGTCTaGACAGTCCTCAGTACAACT +
Preference number: 2 (lower is better)
Translates to: RHHLCLCSGHLFPGVSRSQHSSV*TVLSTT
Trigger: AGTTGTACTGAGGACTGTGCAGACTGAAGAGTGCTG...GGATCTGGACACACCTGGAAATAGATGACCACTGCAAAGACAAAGATGGTGGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
3UTR-3UTR TCA 90 bp CCAGAATCTTCCCAACCTCATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTCAGCAGGTTTCCAGATaGGCTGGACAAGCATGTTCA +
Preference number: 2 (lower is better)
Translates to: PESSQPHESHRHHLCLCSQQVSR*AGQACS
Trigger: TGAACATGCTTGTCCAGCTCATCTGGAAACCTGCTG...ACTGCAAAGACAAAGATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
3UTR-3UTR TCA 90 bp AGAAGCAAATTGAGTTGCCTGTTCGTTCCTTCATATATGTCTCCTCCTCTGCCAGACAAGCATGTTCATTaGGTCATGGGACCTGCCAGG +
Preference number: 2 (lower is better)
Translates to: RSKLSCLFVPSYMSPPLPDKHVH*VMGPAR
Trigger: CCTGGCAGGTCCCATGACTCAATGAACATGCTTGTC...TGGCAGAGGAGGAGACATATATGAAGGAACGAACAGGCAACTCAATTTGCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
3UTR-3UTR GCA 90 bp GAATCTCATCGCCACCATCTTTGTCTTTGCAGTGGTCATCTATTTCCAGGTGTGCCCCACTCTGTGGGGTaGACTGTCATCATATTGTGT +
Preference number: 2 (lower is better)
Translates to: ESHRHHLCLCSGHLFPGVPHSVG*TVIILC
Trigger: ACACAATATGATGACAGTGCACCCCACAGAGTGGGG...CACACCTGGAAATAGATGACCACTGCAAAGACAAAGATGGTGGCGATGAGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
3UTR-3UTR GCA 90 bp TTGAGTTGCCTGTTCGTTCCTTCATATATGTCTCCTCCTCTGCCAACAGGAATGGGTGACCTTAGATGCTaGCACAGCACTCTTCAGTCT +
Preference number: 2 (lower is better)
Translates to: LSCLFVPSYMSPPLPTGMGDLRC*HSTLQS
Trigger: AGACTGAAGAGTGCTGTGGCAGCATCTAAGGTCACC...CATTCCTGTTGGCAGAGGAGGAGACATATATGAAGGAACGAACAGGCAACTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
3UTR-3UTR TCA 90 bp CTTGTGTGCAGTCCCCCACTCTGTGGGGTGCACTGTCATCATATTGTGTTGAAAAACAGGAATGGAATTTaGAGGTGCTATCATCGCACT +
Preference number: 2 (lower is better)
Translates to: LVCSPPLCGVHCHHIVLKNRNGI*RCYHRT
Trigger: AGTGCGATGATAGCACCTTCAAATTCCATTCCTGTT...TTTCAACACAATATGATGACAGTGCACCCCACAGAGTGGGGGACTGCACACAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
3UTR-3UTR GCA 90 bp CAACCTCATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTGGTCATCTATTTTCGCACTTTTCCATCTaGTGGCCACACGCACAGACA +
Preference number: 2 (lower is better)
Translates to: QPHESHRHHLCLCSGHLFSHFSI*WPHAQT
Trigger: TGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGA...AAATAGATGACCACTGCAAAGACAAAGATGGTGGCGATGAGATTCATGAGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
3UTR-3UTR CCA 90 bp AGTCTGCACAGTCCTCAGTACAACTACTCATCTCTTCCATCGTCACTCAGAAGCGGTTTCCAGATGAGCTaGACAAGCATGTTCATTGAG +
Preference number: 2 (lower is better)
Translates to: SLHSPQYNYSSLPSSLRSGFQMS*TSMFIE
Trigger: CTCAATGAACATGCTTGTCCAGCTCATCTGGAAACC...GCTTCTGAGTGACGATGGAAGAGATGAGTAGTTGTACTGAGGACTGTGCAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
3UTR-3UTR CCA 90 bp GAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACAGACGTTGAAACGATGAGATaGTATTTGAAGGCAGCAGGT +
Preference number: 2 (lower is better)
Translates to: EFEGAIIALFHLLATRTDVETMR*YLKAAG
Trigger: ACCTGCTGCCTTCAAATACCATCTCATCGTTTCAAC...GTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
3UTR-3UTR CCA 90 bp GAAACGATGAGATGGTATTTGAAGGCAGCAGGTTTCCAGATGAGCTGGACAAGCCCCAGGGAGTTTCCATaGTCTGGATTTAAGTTTCAG +
Preference number: 2 (lower is better)
Translates to: ETMRWYLKAAGFQMSWTSPREFP*SGFKFQ
Trigger: CTGAAACTTAAATCCAGACCATGGAAACTCCCTGGG...GCTTGTCCAGCTCATCTGGAAACCTGCTGCCTTCAAATACCATCTCATCGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
3UTR-3UTR CCA 90 bp CCTCTGCCAACAGGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGGGTTTCCAGATGAGCTaGACAAGCATGTTCATTGAG +
Preference number: 2 (lower is better)
Translates to: PLPTGMEFEGAIIALFHLGFQMS*TSMFIE
Trigger: CTCAATGAACATGCTTGTCCAGCTCATCTGGAAACC...CAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCATTCCTGTTGGCAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
3UTR-3UTR CCA 90 bp TCTCCTCCTCTGCCAACAGGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCGGTTTCCAGATGAGCTaGACAAGCATGTTCATTGAG +
Preference number: 2 (lower is better)
Translates to: SPPLPTGMEFEGAIIALFGFQMS*TSMFIE
Trigger: CTCAATGAACATGCTTGTCCAGCTCATCTGGAAACC...GAAAAGTGCGATGATAGCACCTTCAAATTCCATTCCTGTTGGCAGAGGAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
3UTR-3UTR CCA 90 bp TCTTTGTCTTTGCAGTGGTCATCTATTTCCAGGTGTGTCCAGATCCAACCCCAGCTCTGCCAACAGGAATaGAATTTGAAGGTGCTATCA +
Preference number: 2 (lower is better)
Translates to: SLSLQWSSISRCVQIQPQLCQQE*NLKVLS
Trigger: TGATAGCACCTTCAAATTCCATTCCTGTTGGCAGAG...CTGGGGTTGGATCTGGACACACCTGGAAATAGATGACCACTGCAAAGACAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
3UTR-3UTR TCA 90 bp AAGAAGGCTAGAAGCAAATTGAGTTGCCTGTTCGTTCCTTCATATATGTCTCCTCAGCAGGTTTCCAGATaGGCTGGACAAGCATGTTCA +
Preference number: 2 (lower is better)
Translates to: KKARSKLSCLFVPSYMSPQQVSR*AGQACS
Trigger: TGAACATGCTTGTCCAGCTCATCTGGAAACCTGCTG...AGGAGACATATATGAAGGAACGAACAGGCAACTCAATTTGCTTCTAGCCTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
3UTR-3UTR GCA 90 bp ATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACACACCATCTTTGTCTTTaGAGTGGTCATCTATTTCCA +
Preference number: 2 (lower is better)
Translates to: MEFEGAIIALFHLLATRTHHLCL*SGHLFP
Trigger: TGGAAATAGATGACCACTGCAAAGACAAAGATGGTG...TGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
3UTR-3UTR GCA 90 bp GGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCAGAAGCAAATTGAGTTaGCTGTTCGTTCCTTCATAT +
Preference number: 2 (lower is better)
Translates to: GMEFEGAIIALFHLLATRRSKLS*LFVPSY
Trigger: ATATGAAGGAACGAACAGGCAACTCAATTTGCTTCT...GCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
3UTR CCA 72 bp TTGAGTCATGGGACCTGCCAGGCTGTGGTGAGAGTTTaGGCCAGAGGTGATGGTGCCAGATACAGCTGTACC +
Preference number: 3 (lower is better)
Translates to: LSHGTCQAVVRV*ARGDGARYSCT
Trigger: GGTACAGCTGTATCTGGCACCATCACCTCTGGCCCAAACTCTCACCACAGCCTGGCAGGTCCCATGACTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
3UTR CCA 72 bp AATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTaGCCACACGCACAGACAAGGTCCGAGCCCTTCGGG +
Preference number: 3 (lower is better)
Translates to: NLKVLSSHFSIC*PHAQTRSEPFG
Trigger: CCCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
3UTR TCA 72 bp GGGAGGCGTTCTACCGCCAGAATCTTCCCAACCTCATaGATCTCATCGCCACCATCTTTGTCTTTGCAGTGG +
Preference number: 3 (lower is better)
Translates to: GRRSTARIFPTS*ISSPPSLSLQW
Trigger: CCACTGCAAAGACAAAGATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAACGCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
3UTR GCA 72 bp TGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTaGTGGCCACACGCACAGACAAGGTCCGAGCCCTTC +
Preference number: 3 (lower is better)
Translates to: WNLKVLSSHFSI*WPHAQTRSEPF
Trigger: GAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
3UTR-3UTR CAA 90 bp TCGGGAGGCGTTCTACCGCCAGAATCTTCCCAACCTCATGAATCTCATCGCCACAAGGCTAGAAGCAAATaGAGTTGCCTGTTCGTTCCT +
Preference number: 3 (lower is better)
Translates to: SGGVLPPESSQPHESHRHKARSK*SCLFVP
Trigger: AGGAACGAACAGGCAACTCAATTTGCTTCTAGCCTT...GTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAACGCCTCCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
3UTR-3UTR CAA 90 bp TTTGCAGTGGTCATCTATTTCCAGGTGTGTCCAGATCCAACCCCAGGGAGTTTCAAGTTTCAGAATGCCTaGTGTGCAGTCCCCCACTCT +
Preference number: 3 (lower is better)
Translates to: FAVVIYFQVCPDPTPGSFKFQNA*CAVPHS
Trigger: AGAGTGGGGGACTGCACACAAGGCATTCTGAAACTT...GAAACTCCCTGGGGTTGGATCTGGACACACCTGGAAATAGATGACCACTGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
3UTR-3UTR CAA 90 bp CCGCCAGAATCTTCCCAACCTCATGAATCTCATCGCCACCATCTTTGTCTTTGCAAGTTTCAGAATGCCTaGTGTGCAGTCCCCCACTCT +
Preference number: 3 (lower is better)
Translates to: PPESSQPHESHRHHLCLCKFQNA*CAVPHS
Trigger: AGAGTGGGGGACTGCACACAAGGCATTCTGAAACTT...GCAAAGACAAAGATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGGCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
3UTR CCA 72 bp CCAGGTGTGTCCAGATCCAACCCCAGGGAGTTTCCATaGTCTGGATTTAAGTTTCAGAATGCCTTGTGTGCA +
Preference number: 3 (lower is better)
Translates to: PGVSRSNPREFP*SGFKFQNALCA
Trigger: TGCACACAAGGCATTCTGAAACTTAAATCCAGACCATGGAAACTCCCTGGGGTTGGATCTGGACACACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
3UTR TCA 72 bp TCACTCAGAAGCAGCCACAGACAGACAACAGACAAATaGGCATGGCCGTGTTCCTACAAAGCTGGCTACAAA +
Preference number: 3 (lower is better)
Translates to: SLRSSHRQTTDK*AWPCSYKAGYK
Trigger: TTTGTAGCCAGCTTTGTAGGAACACGGCCATGCTCATTTGTCTGTTGTCTGTCTGTGGCTGCTTCTGAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
3UTR CCA 72 bp AGATGGTATTTGAAGGCAGCAGGTTTCCAGATGAGCTaGACAAGCATGTTCATTGAGTCATGGGACCTGCCA +
Preference number: 3 (lower is better)
Translates to: RWYLKAAGFQMS*TSMFIESWDLP
Trigger: TGGCAGGTCCCATGACTCAATGAACATGCTTGTCCAGCTCATCTGGAAACCTGCTGCCTTCAAATACCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
3UTR-3UTR CAA 90 bp CCAGAATCTTCCCAACCTCATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTAAGTTTCAGAATGCCTaGTGTGCAGTCCCCCACTCT +
Preference number: 3 (lower is better)
Translates to: PESSQPHESHRHHLCLCSKFQNA*CAVPHS
Trigger: AGAGTGGGGGACTGCACACAAGGCATTCTGAAACTT...ACTGCAAAGACAAAGATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
3UTR TCA 72 bp CCCCACTCTGTGGGGTGCACTGTCATCATATTGTGTTaGAACGATGAGATGGTATTTGAAGGCAGCAGGTTT +
Preference number: 3 (lower is better)
Translates to: PHSVGCTVIILC*NDEMVFEGSRF
Trigger: AAACCTGCTGCCTTCAAATACCATCTCATCGTTTCAACACAATATGATGACAGTGCACCCCACAGAGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
3UTR GCA 72 bp CAACCTCATGAATCTCATCGCCACCATCTTTGTCTTTaGAGTGGTCATCTATTTCCAGGTGTGTCCAGATCC +
Preference number: 3 (lower is better)
Translates to: QPHESHRHHLCL*SGHLFPGVSRS
Trigger: GGATCTGGACACACCTGGAAATAGATGACCACTGCAAAGACAAAGATGGTGGCGATGAGATTCATGAGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
3UTR-3UTR CAA 90 bp AGAAGCAAATTGAGTTGCCTGTTCGTTCCTTCATATATGTCTCCTCCTCTGCCATCATCGCCACCATCTTaGTCTTTGCAGTGGTCATCT +
Preference number: 3 (lower is better)
Translates to: RSKLSCLFVPSYMSPPLPSSPPS*SLQWSS
Trigger: AGATGACCACTGCAAAGACAAAGATGGTGGCGATGA...TGGCAGAGGAGGAGACATATATGAAGGAACGAACAGGCAACTCAATTTGCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
3UTR CCA 72 bp GGTGCACTGTCATCATATTGTGTTGAAACGATGAGATaGTATTTGAAGGCAGCAGGTTTCCAGATGAGCTGG +
Preference number: 3 (lower is better)
Translates to: GALSSYCVETMR*YLKAAGFQMSW
Trigger: CCAGCTCATCTGGAAACCTGCTGCCTTCAAATACCATCTCATCGTTTCAACACAATATGATGACAGTGCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
3UTR CCA 72 bp TTCCTTCATATATGTCTCCTCCTCTGCCAACAGGAATaGAATTTGAAGGTGCTATCATCGCACTTTTCCATC +
Preference number: 3 (lower is better)
Translates to: FLHICLLLCQQE*NLKVLSSHFSI
Trigger: GATGGAAAAGTGCGATGATAGCACCTTCAAATTCCATTCCTGTTGGCAGAGGAGGAGACATATATGAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
3UTR GCA 72 bp TATTTGTCTGCTAAGAAGGCTAGAAGCAAATTGAGTTaGCTGTTCGTTCCTTCATATATGTCTCCTCCTCTG +
Preference number: 3 (lower is better)
Translates to: YLSAKKARSKLS*LFVPSYMSPPL
Trigger: CAGAGGAGGAGACATATATGAAGGAACGAACAGGCAACTCAATTTGCTTCTAGCCTTCTTAGCAGACAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
3UTR TCA 72 bp CAAGATACATGGGAACTCCCTATTGTATGTTCACAATaGCTCTGTACATCTAAAACTGTTCTGAAAAGTTTA +
Preference number: 3 (lower is better)
Translates to: QDTWELPIVCSQ*LCTSKTVLKSL
Trigger: TAAACTTTTCAGAACAGTTTTAGATGTACAGAGTCATTGTGAACATACAATAGGGAGTTCCCATGTATCTTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR TCA 90 bp AGCCCCAAGCCCAGGGGCAAGCGCCCACAGGCTGGACCCAGGCCAGGCACACCTGCTGCAGACCACGCCTaGGTGGGGACGGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: SPKPRGKRPQAGPRPGTPAADHA*VGTAAP
Trigger: TGGGGCTGCCGTCCCCACTCAGGCGTGGTCTGCAGC...AGGTGTGCCTGGCCTGGGTCCAGCCTGTGGGCGCTTGCCCCTGGGCTTGGGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR GCA 90 bp AGCCCCAAGCCCAGGGGCAAGCGCCCACAGGCTGGACCCAGGCCAGGCACACCTAGCCCTGAGGCCGCCTaGTTGGCCAAGCCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: SPKPRGKRPQAGPRPGTPSPEAA*LAKPLS
Trigger: CGAGAGCGGCTTGGCCAAGCAGGCGGCCTCAGGGCT...AGGTGTGCCTGGCCTGGGTCCAGCCTGTGGGCGCTTGCCCCTGGGCTTGGGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR CCA 90 bp AGCCCCAAGCCCAGGGGCAAGCGCCCACAGGCTGGACCCAGGCCAGGCACACCTCAAGCGCCCACAGGCTaGACCCAGGCCAGGCACACC +
Preference number: 4 (lower is better)
Translates to: SPKPRGKRPQAGPRPGTPQAPTG*TQARHT
Trigger: GGTGTGCCTGGCCTGGGTCCAGCCTGTGGGCGCTTG...AGGTGTGCCTGGCCTGGGTCCAGCCTGTGGGCGCTTGCCCCTGGGCTTGGGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR GCA 90 bp AGCCCCAAGCCCAGGGGCAAGCGCCCACAGGCTGGACCCAGGCCAGGCACACCTCAGCAGCTAGGACAGTaGGCCCGGCGCCTGAGTTAC +
Preference number: 4 (lower is better)
Translates to: SPKPRGKRPQAGPRPGTPQQLGQ*ARRLSY
Trigger: GTAACTCAGGCGCCGGGCGCACTGTCCTAGCTGCTG...AGGTGTGCCTGGCCTGGGTCCAGCCTGTGGGCGCTTGCCCCTGGGCTTGGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR CCA 90 bp AGCCCCAAGCCCAGGGGCAAGCGCCCACAGGCTGGACCCAGGCCAGGCACACCTCCTTTCACGTGGCTGTaGGAGGCGATGCGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: SPKPRGKRPQAGPRPGTPPFTWL*EAMRCV
Trigger: GACGCAGCGCATCGCCTCCCACAGCCACGTGAAAGG...AGGTGTGCCTGGCCTGGGTCCAGCCTGTGGGCGCTTGCCCCTGGGCTTGGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR GCA 90 bp AGCCCCAAGCCCAGGGGCAAGCGCCCACAGGCTGGACCCAGGCCAGGCACACCTGCCGGGGTCAGCAGCTaGACTGAGTACCTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: SPKPRGKRPQAGPRPGTPAGVSS*TEYLSV
Trigger: CACACTGAGGTACTCAGTGCAGCTGCTGACCCCGGC...AGGTGTGCCTGGCCTGGGTCCAGCCTGTGGGCGCTTGCCCCTGGGCTTGGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR TCA 90 bp AGCCCCAAGCCCAGGGGCAAGCGCCCACAGGCTGGACCCAGGCCAGGCACACCTCTTTCCACACTGAACTaGCAGCGCTGCAGACCACGC +
Preference number: 4 (lower is better)
Translates to: SPKPRGKRPQAGPRPGTPLSTLN*QRCRPR
Trigger: GCGTGGTCTGCAGCGCTGTCAGTTCAGTGTGGAAAG...AGGTGTGCCTGGCCTGGGTCCAGCCTGTGGGCGCTTGCCCCTGGGCTTGGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR GCA 90 bp AGCCCCAAGCCCAGGGGCAAGCGCCCACAGGCTGGACCCAGGCCAGGCACACCTTGGGAGGCGATGCGCTaGGTCTTCGTAGTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SPKPRGKRPQAGPRPGTPWEAMR*VFVVLF
Trigger: GAAGAGCACTACGAAGACGCAGCGCATCGCCTCCCA...AGGTGTGCCTGGCCTGGGTCCAGCCTGTGGGCGCTTGCCCCTGGGCTTGGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR GCA 90 bp GCACTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCTTCTCGGTGCCGCTaGCCGCGCGCCTGCGGTCGT +
Preference number: 4 (lower is better)
Translates to: ALFHLLATRTDKVRALREASRCR*PRACGR
Trigger: ACGACCGCAGGCGCGCGGGCAGCGGCACCGAGAAGC...CTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR TCA 90 bp AGCCCCAAGCCCAGGGGCAAGCGCCCACAGGCTGGACCCAGGCCAGGCACACCTGGTCAGCAGCTGCACTaGGTACCTCAGTGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: SPKPRGKRPQAGPRPGTPGQQLH*VPQCGL
Trigger: AAGACCACACTGAGGTACTCAGTGCAGCTGCTGACC...AGGTGTGCCTGGCCTGGGTCCAGCCTGTGGGCGCTTGCCCCTGGGCTTGGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR TCA 90 bp GCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCGAGCCGACCATCATCGGCGGTaGGCGCGGGCCGGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: AIIALFHLLATRTDKVRADHHRR*ARAGAG
Trigger: TCCCGCCCCGGCCCGCGCTCACCGCCGATGATGGTC...GGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR GCA 90 bp GGCCACACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCCAGAAAGCCCGGCGAGCCACTaGTTCAGGTCACGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: GHTHRQGPSPSGGVLPPESPASH*FRSRWS
Trigger: CGACCAGCGTGACCTGAAGCAGTGGCTCGCCGGGCT...TTCTGGCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR TCA 90 bp GGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATGCTGCAGACCACGCCTaGGTGGGGACGGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: GPRPGTPGESLTAENLSHAADHA*VGTAAP
Trigger: TGGGGCTGCCGTCCCCACTCAGGCGTGGTCTGCAGC...ATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR TCA 90 bp GCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCAGTGCGCCCGGCGCCTaGGTTACCATGCGGCCGTTA +
Preference number: 4 (lower is better)
Translates to: AGPRPGTPGESLTAENLSSAPGA*VTMRPL
Trigger: TAACGGCCGCATGGTAACTCAGGCGCCGGGCGCACT...GCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR TCA 90 bp GACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATCCTGGCCCACAAGCCCTaGGGCCGCCTGCTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: DPGQAHLGSLLLLKTSAILAHKP*GRLLGQ
Trigger: TTGGCCAAGCAGGCGGCCTCAGGGCTTGTGGGCCAG...GATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR TCA 90 bp GGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATCTGGCCCACAAGCCCTaGGGCCGCCTGCTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: GPRPGTPGESLTAENLSHLAHKP*GRLLGQ
Trigger: TTGGCCAAGCAGGCGGCCTCAGGGCTTGTGGGCCAG...ATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR TCA 90 bp AGCCCCAAGCCCAGGGGCAAGCGCCCACAGGCTGGACCCAGGCCAGGCACACCTAAATGCTTTCCACACTaGACTGACAGCGCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: SPKPRGKRPQAGPRPGTPKCFPH*TDSAAD
Trigger: GTCTGCAGCGCTGTCAGTTCAGTGTGGAAAGCATTT...AGGTGTGCCTGGCCTGGGTCCAGCCTGTGGGCGCTTGCCCCTGGGCTTGGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR GCA 90 bp GGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATAGCCCTGAGGCCGCCTaGTTGGCCAAGCCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: GPRPGTPGESLTAENLSHSPEAA*LAKPLS
Trigger: CGAGAGCGGCTTGGCCAAGCAGGCGGCCTCAGGGCT...ATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR CCA 90 bp GCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCCCAGCCCTTTCACGTaGCTGTGGGAGGCGATGCGC +
Preference number: 4 (lower is better)
Translates to: AGPRPGTPGESLTAENLSPSPFT*LWEAMR
Trigger: GCGCATCGCCTCCCACAGCCACGTGAAAGGGCTGGG...GCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR CCA 90 bp CTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCTCTCGCGCGTTCTCCTaGCCCACAAGCCCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: LDPGQAHLGSLLLLKTSASRAFS*PTSPEA
Trigger: GGCCTCAGGGCTTGTGGGCCAGGAGAACGCGCGAGA...GGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR CCA 90 bp GGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATCAAGCGCCCACAGGCTaGACCCAGGCCAGGCACACC +
Preference number: 4 (lower is better)
Translates to: GPRPGTPGESLTAENLSHQAPTG*TQARHT
Trigger: GGTGTGCCTGGCCTGGGTCCAGCCTGTGGGCGCTTG...ATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR CCA 90 bp AGGCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCACAGACCACGCCTGAGTaGGGACGGCAGCCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: RLDPGQAHLGSLLLLKTSQTTPE*GRQPQA
Trigger: GGCTTGGGGCTGCCGTCCCCACTCAGGCGTGGTCTG...TGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR CCA 90 bp GACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATCCAGACCACGCCTGAGTaGGGACGGCAGCCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: DPGQAHLGSLLLLKTSAIQTTPE*GRQPQA
Trigger: GGCTTGGGGCTGCCGTCCCCACTCAGGCGTGGTCTG...GATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR TCA 90 bp GGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATAGTGCGCCCGGCGCCTaGGTTACCATGCGGCCGTTA +
Preference number: 4 (lower is better)
Translates to: GPRPGTPGESLTAENLSHSAPGA*VTMRPL
Trigger: TAACGGCCGCATGGTAACTCAGGCGCCGGGCGCACT...ATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR TCA 90 bp TCATCTATTTCCAGGTGTGTCCAGATCCAACCCCAGGGAGTTTCCATGGTCTGGGACTACCGAGGGAGGTaGGGGGCGGGCCGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: SSISRCVQIQPQGVSMVWDYRGR*GAGRAG
Trigger: ACCCGCCCGGCCCGCCCCTCACCTCCCTCGGTAGTC...CCAGACCATGGAAACTCCCTGGGGTTGGATCTGGACACACCTGGAAATAGATGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR GCA 90 bp GCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCCATCAGAATGCCTTGTGTaGAGTCCCCCACTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: AGHTHRQGPSPSGGVLPPSECLV*SPPLCG
Trigger: CCCACAGAGTGGGGGACTGCACACAAGGCATTCTGA...TGGCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CCA 90 bp GCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCCTTTCACGTGGCTGTaGGAGGCGATGCGCTGCGTC +
Preference number: 4 (lower is better)
Translates to: AGPRPGTPGESLTAENLSPFTWL*EAMRCV
Trigger: GACGCAGCGCATCGCCTCCCACAGCCACGTGAAAGG...GCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR CCA 90 bp GGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATCCCAGCCCTTTCACGTaGCTGTGGGAGGCGATGCGC +
Preference number: 4 (lower is better)
Translates to: GPRPGTPGESLTAENLSHPSPFT*LWEAMR
Trigger: GCGCATCGCCTCCCACAGCCACGTGAAAGGGCTGGG...ATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR CCA 90 bp GACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATCCTGAGGCCGCCTGCTTaGCCAAGCCGCTCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: DPGQAHLGSLLLLKTSAILRPPA*PSRSRP
Trigger: TGGACGAGAGCGGCTTGGCCAAGCAGGCGGCCTCAG...GATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR CCA 90 bp GGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATTCTCGCGCGTTCTCCTaGCCCACAAGCCCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: GPRPGTPGESLTAENLSHSRAFS*PTSPEA
Trigger: GGCCTCAGGGCTTGTGGGCCAGGAGAACGCGCGAGA...ATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR TCA 90 bp GCCACACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCCAGAATCGCGGTGCAGGTAGGTaGAGCACTCAATGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: ATRTDKVRALREAFYRQNRGAGR*STQCPA
Trigger: TGCTGGACATTGAGTGCTTCACCTACCTGCACCGCG...ATTCTGGCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR GCA 90 bp AGCCCCAAGCCCAGGGGCAAGCGCCCACAGGCTGGACCCAGGCCAGGCACACCTCCTCAATCTTCATTTTaGAGACGCCGGGAGCTAAAA +
Preference number: 4 (lower is better)
Translates to: SPKPRGKRPQAGPRPGTPPQSSF*RRRELK
Trigger: TTTTAGCTCCCGGCGTCTGCAAAATGAAGATTGAGG...AGGTGTGCCTGGCCTGGGTCCAGCCTGTGGGCGCTTGCCCCTGGGCTTGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR GCA 90 bp GCCACACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCCAGAATGCAGCCCAATGGCCCTaGGGAAGTTCTCCATCAGCA +
Preference number: 4 (lower is better)
Translates to: ATRTDKVRALREAFYRQNAAQWP*GSSPSA
Trigger: TGCTGATGGAGAACTTCCGCAGGGCCATTGGGCTGC...ATTCTGGCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR GCA 90 bp CTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCGTATCACACCTGCCCTaGCTCTTCACGGCCCCACTG +
Preference number: 4 (lower is better)
Translates to: LDPGQAHLGSLLLLKTSAVSHLP*LFTAPL
Trigger: CAGTGGGGCCGTGAAGAGGCAGGGCAGGTGTGATAC...GGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR GCA 90 bp CAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCCAGAATCTTCCCAACCGTATCACACCTGCCCTaGCTCTTCACGGCCCCACTG +
Preference number: 4 (lower is better)
Translates to: QTRSEPFGRRSTARIFPTVSHLP*LFTAPL
Trigger: CAGTGGGGCCGTGAAGAGGCAGGGCAGGTGTGATAC...GGTTGGGAAGATTCTGGCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000643535.1
ENST00000646581.1
CDS-3UTR GCA 90 bp CTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCGCCGGGGTCAGCAGCTaGACTGAGTACCTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: LDPGQAHLGSLLLLKTSAAGVSS*TEYLSV
Trigger: CACACTGAGGTACTCAGTGCAGCTGCTGACCCCGGC...GGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR GCA 90 bp GCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCCATTGAGTCATGGGACCTaGCAGGCTGTGGTGAGAGTT +
Preference number: 4 (lower is better)
Translates to: AGHTHRQGPSPSGGVLPPLSHGT*QAVVRV
Trigger: AACTCTCACCACAGCCTGGCAGGTCCCATGACTCAA...TGGCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR CCA 90 bp AGCCCCAAGCCCAGGGGCAAGCGCCCACAGGCTGGACCCAGGCCAGGCACACCTGTGGAGTATACAGCATaGTCCGGATTATCATCACTC +
Preference number: 4 (lower is better)
Translates to: SPKPRGKRPQAGPRPGTPVEYTA*SGLSSL
Trigger: GAGTGATGATAATCCGGACCATGCTGTATACTCCAC...AGGTGTGCCTGGCCTGGGTCCAGCCTGTGGGCGCTTGCCCCTGGGCTTGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR TCA 90 bp GCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCGCGGTGCAGGTAGGTaGAGCACTCAATGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: AGPRPGTPGESLTAENLSRGAGR*STQCPA
Trigger: TGCTGGACATTGAGTGCTTCACCTACCTGCACCGCG...GCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR TCA 90 bp TCTCATCGCCACCATCTTTGTCTTTGCAGTGGTCATCTATTTCCAGGTGTGTCCGACCATCATCGGCGGTaGGCGCGGGCCGGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: SHRHHLCLCSGHLFPGVSDHHRR*ARAGAG
Trigger: TCCCGCCCCGGCCCGCGCTCACCGCCGATGATGGTC...GGACACACCTGGAAATAGATGACCACTGCAAAGACAAAGATGGTGGCGATGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR TCA 90 bp GAGGCGTTCTACCGCCAGAATCTTCCCAACCTCATGAATCTCATCGCCACCATCCTCCACCGCCGCCTTTaGCAAGCAGCCGCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: EAFYRQNLPNLMNLIATILHRRL*QAAAEP
Trigger: CGGCTCTGCGGCTGCTTGTCAAAGGCGGCGGTGGAG...GATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAACGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR TCA 90 bp GCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCTGCCGTGAGGGGATGTaGTGTCCTCAGTGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: AGPRPGTPGESLTAENLSCREGM*CPQCLC
Trigger: ACAGAGGCACTGAGGACATCACATCCCCTCACGGCA...GCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000478892.1
ENST00000646091.1
CDS-3UTR TCA 90 bp CCGAGCCCTTCGGGAGGCGTTCTACCGCCAGAATCTTCCCAACCTCATGAATCTCCTGCCAGGCTGTGGTaGGAGTTTGGGCCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: PSPSGGVLPPESSQPHESPARLW*EFGPEV
Trigger: CACCTCTGGCCCAAACTCTCACCACAGCCTGGCAGG...AGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAACGCCTCCCGAAGGGCTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR GCA 90 bp CTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCTGGGAGGCGATGCGCTaGGTCTTCGTAGTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LDPGQAHLGSLLLLKTSAWEAMR*VFVVLF
Trigger: GAAGAGCACTACGAAGACGCAGCGCATCGCCTCCCA...GGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR GCA 90 bp CTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCGAGCCAGAGCTGTCTTaGCAGTTCCAGGAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LDPGQAHLGSLLLLKTSAEPELS*QFQEVL
Trigger: CAGGACCTCCTGGAACTGGCAAGACAGCTCTGGCTC...GGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR GCA 90 bp CTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCGCAGCCCAATGGCCCTaGGGAAGTTCTCCATCAGCA +
Preference number: 4 (lower is better)
Translates to: LDPGQAHLGSLLLLKTSAAAQWP*GSSPSA
Trigger: TGCTGATGGAGAACTTCCGCAGGGCCATTGGGCTGC...GGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR GCA 90 bp ATCGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGGGTATCACACCTGCCCTaGCTCTTCACGGCCCCACTG +
Preference number: 4 (lower is better)
Translates to: IALFHLLATRTDKVRALRVSHLP*LFTAPL
Trigger: CAGTGGGGCCGTGAAGAGGCAGGGCAGGTGTGATAC...CCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000643535.1
ENST00000646581.1
CDS-3UTR GCA 90 bp GGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATGTATCACACCTGCCCTaGCTCTTCACGGCCCCACTG +
Preference number: 4 (lower is better)
Translates to: GPRPGTPGESLTAENLSHVSHLP*LFTAPL
Trigger: CAGTGGGGCCGTGAAGAGGCAGGGCAGGTGTGATAC...ATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR GCA 90 bp GCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATAGGTATCACACCTaGCCTGCCTCTTCACGGCCC +
Preference number: 4 (lower is better)
Translates to: AGPRPGTPGESLTAENLSHRYHT*PASSRP
Trigger: GGGCCGTGAAGAGGCAGGGCAGGTGTGATACCTATG...GCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR GCA 90 bp GACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATCGCCGGGGTCAGCAGCTaGACTGAGTACCTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: DPGQAHLGSLLLLKTSAIAGVSS*TEYLSV
Trigger: CACACTGAGGTACTCAGTGCAGCTGCTGACCCCGGC...GATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR GCA 90 bp TGCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCCGGTGACCTTAGATGCTaGCACAGCACTCTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: CWPHAQTRSEPFGRRSTAGDLRC*HSTLQS
Trigger: AGACTGAAGAGTGCTGTGGCAGCATCTAAGGTCACC...GGCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR CCA 90 bp AGCCCCAAGCCCAGGGGCAAGCGCCCACAGGCTGGACCCAGGCCAGGCACACCTCTTCATAAACTTCCTTaGTCTCCTTTATTCGCAGCC +
Preference number: 4 (lower is better)
Translates to: SPKPRGKRPQAGPRPGTPLHKLP*SPLFAA
Trigger: GGCTGCGAATAAAGGAGACCAAGGAAGTTTATGAAG...AGGTGTGCCTGGCCTGGGTCCAGCCTGTGGGCGCTTGCCCCTGGGCTTGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR CCA 90 bp CCATCTGCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCTAACCTCAGTGTGGTCTTaGTGCCAATCTCCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: PSAGHTHRQGPSPSGGVLTSVWS*CQSPPG
Trigger: ACCTGGGGGAGATTGGCACCAAGACCACACTGAGGT...TAGAACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR CCA 90 bp ACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCCAGAATCTTCCGCATCACGCTCGATCTaGGCTTCTCGTGCTTCTCGG +
Preference number: 4 (lower is better)
Translates to: THRQGPSPSGGVLPPESSASRSI*ASRASR
Trigger: CCGAGAAGCACGAGAAGCCCAGATCGAGCGTGATGC...GGAAGATTCTGGCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR TCA 90 bp GACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATCCGCGGTGCAGGTAGGTaGAGCACTCAATGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: DPGQAHLGSLLLLKTSAIRGAGR*STQCPA
Trigger: TGCTGGACATTGAGTGCTTCACCTACCTGCACCGCG...GATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR TCA 90 bp AGGCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCACGCGGTGCAGGTAGGTaGAGCACTCAATGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: RLDPGQAHLGSLLLLKTSRGAGR*STQCPA
Trigger: TGCTGGACATTGAGTGCTTCACCTACCTGCACCGCG...TGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR TCA 90 bp CATCGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGCGCGGTGCAGGTAGGTaGAGCACTCAATGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: HRTFPSAGHTHRQGPSPSRGAGR*STQCPA
Trigger: TGCTGGACATTGAGTGCTTCACCTACCTGCACCGCG...CGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR TCA 90 bp GGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATCGCGGTGCAGGTAGGTaGAGCACTCAATGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GPRPGTPGESLTAENLSHRGAGR*STQCPA
Trigger: TGCTGGACATTGAGTGCTTCACCTACCTGCACCGCG...ATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR TCA 90 bp CTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCTCAAGAGGGATGCCGTaGGGGGATGTGATGTCCTCA +
Preference number: 4 (lower is better)
Translates to: LDPGQAHLGSLLLLKTSASRGMP*GDVMSS
Trigger: TGAGGACATCACATCCCCTCACGGCATCCCTCTTGA...GGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR TCA 90 bp GCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCGGTCAGCAGCTGCACTaGGTACCTCAGTGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: AGPRPGTPGESLTAENLSGQQLH*VPQCGL
Trigger: AAGACCACACTGAGGTACTCAGTGCAGCTGCTGACC...GCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR TCA 90 bp AGCCCCAAGCCCAGGGGCAAGCGCCCACAGGCTGGACCCAGGCCAGGCACACCTCATAGAAAAGTTCACTaGTCTCTTCGACATGCTCTT +
Preference number: 4 (lower is better)
Translates to: SPKPRGKRPQAGPRPGTPHRKVH*SLRHAL
Trigger: AAGAGCATGTCGAAGAGATCAGTGAACTTTTCTATG...AGGTGTGCCTGGCCTGGGTCCAGCCTGTGGGCGCTTGCCCCTGGGCTTGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR TCA 90 bp GGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATCTTTCCACACTGAACTaGCAGCGCTGCAGACCACGC +
Preference number: 4 (lower is better)
Translates to: GPRPGTPGESLTAENLSHLSTLN*QRCRPR
Trigger: GCGTGGTCTGCAGCGCTGTCAGTTCAGTGTGGAAAG...ATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR TCA 90 bp GACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATCTGCCGTGAGGGGATGTaGTGTCCTCAGTGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: DPGQAHLGSLLLLKTSAICREGM*CPQCLC
Trigger: ACAGAGGCACTGAGGACATCACATCCCCTCACGGCA...GATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000478892.1
ENST00000646091.1
CDS-3UTR GCA 90 bp GACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATCGAGCCAGAGCTGTCTTaGCAGTTCCAGGAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: DPGQAHLGSLLLLKTSAIEPELS*QFQEVL
Trigger: CAGGACCTCCTGGAACTGGCAAGACAGCTCTGGCTC...GATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR GCA 90 bp AGGCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCAGCCCAATGGCCCTaGGGAAGTTCTCCATCAGCA +
Preference number: 4 (lower is better)
Translates to: RLDPGQAHLGSLLLLKTSAAQWP*GSSPSA
Trigger: TGCTGATGGAGAACTTCCGCAGGGCCATTGGGCTGC...TGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR GCA 90 bp GACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATCCATAGGTATCACACCTaGCCTGCCTCTTCACGGCCC +
Preference number: 4 (lower is better)
Translates to: DPGQAHLGSLLLLKTSAIHRYHT*PASSRP
Trigger: GGGCCGTGAAGAGGCAGGGCAGGTGTGATACCTATG...GATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR GCA 90 bp CTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCTCAGTGTGGTCTTGGTaGCAATCTCCCCCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: LDPGQAHLGSLLLLKTSASVWSW*QSPPGG
Trigger: ACCACCTGGGGGAGATTGGCACCAAGACCACACTGA...GGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR GCA 90 bp TGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACAGGTCACGCTGGTCGACTaGCCCGGGCACGCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: WNLKVLSSHFSICWPHAQVTLVD*PGHASL
Trigger: GAGGGAGGCGTGCCCGGGGCAGTCGACCAGCGTGAC...CTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR GCA 90 bp TCTCATCGCCACCATCTTTGTCTTTGCAGTGGTCATCTATTTCCAGGTGTGTCCGCTTCTCGGTGCCGCTaGCCGCGCGCCTGCGGTCGT +
Preference number: 4 (lower is better)
Translates to: SHRHHLCLCSGHLFPGVSASRCR*PRACGR
Trigger: ACGACCGCAGGCGCGCGGGCAGCGGCACCGAGAAGC...GGACACACCTGGAAATAGATGACCACTGCAAAGACAAAGATGGTGGCGATGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR GCA 90 bp GGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCGAGATCTGGGCTTCTCGTaGTTCTCGGTGCCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GAIIALFHLLATRTDKVRDLGFS*FSVPLP
Trigger: GGGCAGCGGCACCGAGAAGCACGAGAAGCCCAGATC...TCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR CCA 90 bp CTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCACTCCCCACCATTaGGCAGAAGGGGACCTTACT +
Preference number: 4 (lower is better)
Translates to: LFHLLATRTDKVRALREAFTPHH*AEGDLT
Trigger: AGTAAGGTCCCCTTCTGCCCAATGGTGGGGAGTGAA...CGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR CCA 90 bp GGCCACACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCCAGAAAGCTCAGCAATGCCCTaGTCGATGTACTTGTTCACC +
Preference number: 4 (lower is better)
Translates to: GHTHRQGPSPSGGVLPPESSAMP*SMYLFT
Trigger: GGTGAACAAGTACATCGACCAGGGCATTGCTGAGCT...TTCTGGCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CCA 90 bp CTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCACCTCAGTGTGGTCTTaGTGCCAATCTCCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LDPGQAHLGSLLLLKTSATSVWS*CQSPPG
Trigger: ACCTGGGGGAGATTGGCACCAAGACCACACTGAGGT...GGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CCA 90 bp AGCCCCAAGCCCAGGGGCAAGCGCCCACAGGCTGGACCCAGGCCAGGCACACCTTGGGTACAAGATACATaGGAACTCCCTATTGTATGT +
Preference number: 4 (lower is better)
Translates to: SPKPRGKRPQAGPRPGTPWVQDT*ELPIVC
Trigger: ACATACAATAGGGAGTTCCCATGTATCTTGTACCCA...AGGTGTGCCTGGCCTGGGTCCAGCCTGTGGGCGCTTGCCCCTGGGCTTGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR TCA 90 bp GACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATCTCAAGAGGGATGCCGTaGGGGGATGTGATGTCCTCA +
Preference number: 4 (lower is better)
Translates to: DPGQAHLGSLLLLKTSAISRGMP*GDVMSS
Trigger: TGAGGACATCACATCCCCTCACGGCATCCCTCTTGA...GATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR TCA 90 bp AGGCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCATCAAGAGGGATGCCGTaGGGGGATGTGATGTCCTCA +
Preference number: 4 (lower is better)
Translates to: RLDPGQAHLGSLLLLKTSSRGMP*GDVMSS
Trigger: TGAGGACATCACATCCCCTCACGGCATCCCTCTTGA...TGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR TCA 90 bp AGGCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGGTCAGCAGCTGCACTaGGTACCTCAGTGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: RLDPGQAHLGSLLLLKTSGQQLH*VPQCGL
Trigger: AAGACCACACTGAGGTACTCAGTGCAGCTGCTGACC...TGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR TCA 90 bp CATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTGGTCATCTATTTCCAGGTGACTACCGAGGGAGGTaGGGGGCGGGCCGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: HESHRHHLCLCSGHLFPGDYRGR*GAGRAG
Trigger: ACCCGCCCGGCCCGCCCCTCACCTCCCTCGGTAGTC...ACCTGGAAATAGATGACCACTGCAAAGACAAAGATGGTGGCGATGAGATTCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR TCA 90 bp CATCGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGAGTTTGGGCCAGAGGTaGTGGTGCCAGATACAGCTG +
Preference number: 4 (lower is better)
Translates to: HRTFPSAGHTHRQGPSPSSLGQR*WCQIQL
Trigger: CAGCTGTATCTGGCACCATCACCTCTGGCCCAAACT...CGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR GCA 90 bp CAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCCAGAATCTTCCCAACCAGTTCCAGGAGGTCCTaGCAACAAGACAGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: QTRSEPFGRRSTARIFPTSSRRS*QQDSSS
Trigger: GGAAGAGCTGTCTTGTTGGCAGGACCTCCTGGAACT...GGTTGGGAAGATTCTGGCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR GCA 90 bp GCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCGAGCCGCAGCCCAATGGCCCTaGGGAAGTTCTCCATCAGCA +
Preference number: 4 (lower is better)
Translates to: AIIALFHLLATRTDKVRAAAQWP*GSSPSA
Trigger: TGCTGATGGAGAACTTCCGCAGGGCCATTGGGCTGC...GGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR GCA 90 bp CCGAGCCCTTCGGGAGGCGTTCTACCGCCAGAATCTTCCCAACCTCATGAATCTCATAGGTATCACACCTaGCCTGCCTCTTCACGGCCC +
Preference number: 4 (lower is better)
Translates to: PSPSGGVLPPESSQPHESHRYHT*PASSRP
Trigger: GGGCCGTGAAGAGGCAGGGCAGGTGTGATACCTATG...AGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAACGCCTCCCGAAGGGCTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000643535.1
ENST00000646581.1
CDS-3UTR GCA 90 bp GCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCGGACCAGCTCAGCAATaGCCTGGTCGATGTACTTGT +
Preference number: 4 (lower is better)
Translates to: AGPRPGTPGESLTAENLSGPAQQ*PGRCTC
Trigger: ACAAGTACATCGACCAGGGCATTGCTGAGCTGGTCC...GCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR GCA 90 bp GCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCGTTGCCTCGGTTGGATaGAAAGATGACGATGGGAGC +
Preference number: 4 (lower is better)
Translates to: AGPRPGTPGESLTAENLSVASVG*KDDDGS
Trigger: GCTCCCATCGTCATCTTTGCATCCAACCGAGGCAAC...GCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR GCA 90 bp CTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCGTTGCCTCGGTTGGATaGAAAGATGACGATGGGAGC +
Preference number: 4 (lower is better)
Translates to: LDPGQAHLGSLLLLKTSAVASVG*KDDDGS
Trigger: GCTCCCATCGTCATCTTTGCATCCAACCGAGGCAAC...GGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR GCA 90 bp GACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATCTCAGTGTGGTCTTGGTaGCAATCTCCCCCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: DPGQAHLGSLLLLKTSAISVWSW*QSPPGG
Trigger: ACCACCTGGGGGAGATTGGCACCAAGACCACACTGA...GATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR GCA 90 bp GGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATTCAGTGTGGTCTTGGTaGCAATCTCCCCCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: GPRPGTPGESLTAENLSHSVWSW*QSPPGG
Trigger: ACCACCTGGGGGAGATTGGCACCAAGACCACACTGA...ATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR GCA 90 bp GAAACGATGAGATGGTATTTGAAGGCAGCAGGTTTCCAGATGAGCTGGACAAGCGGGCCGGAACGGGTGTaGACAGCGCGCCGGTTACGG +
Preference number: 4 (lower is better)
Translates to: ETMRWYLKAAGFQMSWTSGPERV*TARRLR
Trigger: CCGTAACCGGCGCGCTGTGCACACCCGTTCCGGCCC...GCTTGTCCAGCTCATCTGGAAACCTGCTGCCTTCAAATACCATCTCATCGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR CCA 90 bp GCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCTTATTCGCAGCCCAATaGCCCTGCGGAAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: AGPRPGTPGESLTAENLSLFAAQ*PCGSSP
Trigger: TGGAGAACTTCCGCAGGGCCATTGGGCTGCGAATAA...GCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR CCA 90 bp AGCCCCAAGCCCAGGGGCAAGCGCCCACAGGCTGGACCCAGGCCAGGCACACCTAACTTTCAAAAATGCTaGGGTCCAGTTTCAACTGTT +
Preference number: 4 (lower is better)
Translates to: SPKPRGKRPQAGPRPGTPNFQKC*GPVSTV
Trigger: AACAGTTGAAACTGGACCCCAGCATTTTTGAAAGTT...AGGTGTGCCTGGCCTGGGTCCAGCCTGTGGGCGCTTGCCCCTGGGCTTGGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR CCA 90 bp GACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATCACCTCAGTGTGGTCTTaGTGCCAATCTCCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: DPGQAHLGSLLLLKTSAITSVWS*CQSPPG
Trigger: ACCTGGGGGAGATTGGCACCAAGACCACACTGAGGT...GATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CCA 90 bp AGGCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAACCTCAGTGTGGTCTTaGTGCCAATCTCCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: RLDPGQAHLGSLLLLKTSTSVWS*CQSPPG
Trigger: ACCTGGGGGAGATTGGCACCAAGACCACACTGAGGT...TGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CCA 90 bp CTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCCTGAGTACCTCAGTGTaGTCTTGGTGCCAATCTCCC +
Preference number: 4 (lower is better)
Translates to: LDPGQAHLGSLLLLKTSALSTSV*SWCQSP
Trigger: GGGAGATTGGCACCAAGACCACACTGAGGTACTCAG...GGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CCA 90 bp CGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGGGACACTTTTCCATCTGCTaGCCACACGCACAGACAAGG +
Preference number: 4 (lower is better)
Translates to: RTFPSAGHTHRQGPSPSGHFSIC*PHAQTR
Trigger: CCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTG...TCCCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR TCA 90 bp TGCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCCCTCGAAGTTTGTCTGTaGTTTCTGTCTTCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: CWPHAQTRSEPFGRRSTALEVCL*FLSSLA
Trigger: AGCCAAAGAAGACAGAAATCACAGACAAACTTCGAG...GGCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000643535.1
ENST00000646581.1
CDS-3UTR TCA 90 bp CCGAGCCCTTCGGGAGGCGTTCTACCGCCAGAATCTTCCCAACCTCATGAATCTAAACCCTGCCTACGGTaGCCTCCAGTTCCTAGACCA +
Preference number: 4 (lower is better)
Translates to: PSPSGGVLPPESSQPHESKPCLR*PPVPRP
Trigger: TGGTCTAGGAACTGGAGGTCACCGTAGGCAGGGTTT...AGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAACGCCTCCCGAAGGGCTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR TCA 90 bp AGCCCTTCGGGAGGCGTTCTACCGCCAGAATCTTCCCAACCTCATGAATCTCATGCAGGAGGAGCCACGTaGGAGAGAAACCCTGCCTAC +
Preference number: 4 (lower is better)
Translates to: SPSGGVLPPESSQPHESHAGGAT*ERNPAY
Trigger: GTAGGCAGGGTTTCTCTCTCACGTGGCTCCTCCTGC...ATGAGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAACGCCTCCCGAAGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR TCA 90 bp ACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCCAGAATCTTCCCAGCAGGTTTCCAGATaGGCTGGACAAGCATGTTCA +
Preference number: 4 (lower is better)
Translates to: THRQGPSPSGGVLPPESSQQVSR*AGQACS
Trigger: TGAACATGCTTGTCCAGCTCATCTGGAAACCTGCTG...GGAAGATTCTGGCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR TCA 90 bp CACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCCAGAATCTTCCAGCAGGTTTCCAGATaGGCTGGACAAGCATGTTCA +
Preference number: 4 (lower is better)
Translates to: HAQTRSEPFGRRSTARIFQQVSR*AGQACS
Trigger: TGAACATGCTTGTCCAGCTCATCTGGAAACCTGCTG...GAAGATTCTGGCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR TCA 90 bp CTGCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCAACAGGAATGGAATTTaGAGGTGCTATCATCGCACT +
Preference number: 4 (lower is better)
Translates to: LLATRTDKVRALREAFYRNRNGI*RCYHRT
Trigger: AGTGCGATGATAGCACCTTCAAATTCCATTCCTGTT...GCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR GCA 90 bp AGGCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAAGTTCCAGGAGGTCCTaGCAACAAGACAGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RLDPGQAHLGSLLLLKTSSSRRS*QQDSSS
Trigger: GGAAGAGCTGTCTTGTTGGCAGGACCTCCTGGAACT...TGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR GCA 90 bp GGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATAGTTCCAGGAGGTCCTaGCAACAAGACAGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: GPRPGTPGESLTAENLSHSSRRS*QQDSSS
Trigger: GGAAGAGCTGTCTTGTTGGCAGGACCTCCTGGAACT...ATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR GCA 90 bp GACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATCGGACCAGCTCAGCAATaGCCTGGTCGATGTACTTGT +
Preference number: 4 (lower is better)
Translates to: DPGQAHLGSLLLLKTSAIGPAQQ*PGRCTC
Trigger: ACAAGTACATCGACCAGGGCATTGCTGAGCTGGTCC...GATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR GCA 90 bp GGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATGGACCAGCTCAGCAATaGCCTGGTCGATGTACTTGT +
Preference number: 4 (lower is better)
Translates to: GPRPGTPGESLTAENLSHGPAQQ*PGRCTC
Trigger: ACAAGTACATCGACCAGGGCATTGCTGAGCTGGTCC...ATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR GCA 90 bp AGGCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGTTGCCTCGGTTGGATaGAAAGATGACGATGGGAGC +
Preference number: 4 (lower is better)
Translates to: RLDPGQAHLGSLLLLKTSVASVG*KDDDGS
Trigger: GCTCCCATCGTCATCTTTGCATCCAACCGAGGCAAC...TGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR GCA 90 bp GGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATGTTGCCTCGGTTGGATaGAAAGATGACGATGGGAGC +
Preference number: 4 (lower is better)
Translates to: GPRPGTPGESLTAENLSHVASVG*KDDDGS
Trigger: GCTCCCATCGTCATCTTTGCATCCAACCGAGGCAAC...ATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR GCA 90 bp CCTCTGCCAACAGGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGGTCACGCTGGTCGACTaGCCCGGGCACGCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: PLPTGMEFEGAIIALFHLVTLVD*PGHASL
Trigger: GAGGGAGGCGTGCCCGGGGCAGTCGACCAGCGTGAC...CAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCATTCCTGTTGGCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR GCA 90 bp TCTCCTCCTCTGCCAACAGGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCGCTGCCCGCGCGCCTaGGGTCGTCTTTGCCCGAGT +
Preference number: 4 (lower is better)
Translates to: SPPLPTGMEFEGAIIALFRCPRA*GRLCPS
Trigger: ACTCGGGCAAAGACGACCGCAGGCGCGCGGGCAGCG...GAAAAGTGCGATGATAGCACCTTCAAATTCCATTCCTGTTGGCAGAGGAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR GCA 90 bp GAATCTCATCGCCACCATCTTTGTCTTTGCAGTGGTCATCTATTTCCAGGTGTGTCTCGTGCTTCTCGGTaGCGCTGCCCGCGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: ESHRHHLCLCSGHLFPGVSRASR*RCPRAC
Trigger: GCAGGCGCGCGGGCAGCGGCACCGAGAAGCACGAGA...CACACCTGGAAATAGATGACCACTGCAAAGACAAAGATGGTGGCGATGAGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR GCA 90 bp GAATCTTCCCAACCTCATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTGGTTCTCGTGCTTCTCGGTaGCGCTGCCCGCGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: ESSQPHESHRHHLCLCSGSRASR*RCPRAC
Trigger: GCAGGCGCGCGGGCAGCGGCACCGAGAAGCACGAGA...ACCACTGCAAAGACAAAGATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR GCA 90 bp GAATCTTCCCAACCTCATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTGGTGGGCCGGAACGGGTGTaGACAGCGCGCCGGTTACGG +
Preference number: 4 (lower is better)
Translates to: ESSQPHESHRHHLCLCSGGPERV*TARRLR
Trigger: CCGTAACCGGCGCGCTGTGCACACCCGTTCCGGCCC...ACCACTGCAAAGACAAAGATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR GCA 90 bp GCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCCAATATGTCTCCTCCTCTaGCAACAGGAATGGAATTTG +
Preference number: 4 (lower is better)
Translates to: AGHTHRQGPSPSGGVLPPICLLL*QQEWNL
Trigger: CAAATTCCATTCCTGTTGGCAGAGGAGGAGACATAT...TGGCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CCA 90 bp GACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATCTTCACTCCCCACCATTaGGCAGAAGGGGACCTTACT +
Preference number: 4 (lower is better)
Translates to: DPGQAHLGSLLLLKTSAIFTPHH*AEGDLT
Trigger: AGTAAGGTCCCCTTCTGCCCAATGGTGGGGAGTGAA...GATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR CCA 90 bp AGGCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCATTATTCGCAGCCCAATaGCCCTGCGGAAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: RLDPGQAHLGSLLLLKTSLFAAQ*PCGSSP
Trigger: TGGAGAACTTCCGCAGGGCCATTGGGCTGCGAATAA...TGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR CCA 90 bp CTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCTGCCATATCCTCCCATaGGATTCTCTGTCTCACACG +
Preference number: 4 (lower is better)
Translates to: LDPGQAHLGSLLLLKTSACHILP*DSLSHT
Trigger: CGTGTGAGACAGAGAATCCCATGGGAGGATATGGCA...GGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR CCA 90 bp GCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCTGCCATATCCTCCCATaGGATTCTCTGTCTCACACG +
Preference number: 4 (lower is better)
Translates to: AGPRPGTPGESLTAENLSCHILP*DSLSHT
Trigger: CGTGTGAGACAGAGAATCCCATGGGAGGATATGGCA...GCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR CCA 90 bp CTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCAGCTCAGCAATGCCCTaGTCGATGTACTTGTTCACC +
Preference number: 4 (lower is better)
Translates to: LDPGQAHLGSLLLLKTSASSAMP*SMYLFT
Trigger: GGTGAACAAGTACATCGACCAGGGCATTGCTGAGCT...GGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CCA 90 bp GCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCAGCTCAGCAATGCCCTaGTCGATGTACTTGTTCACC +
Preference number: 4 (lower is better)
Translates to: AGPRPGTPGESLTAENLSSSAMP*SMYLFT
Trigger: GGTGAACAAGTACATCGACCAGGGCATTGCTGAGCT...GCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CCA 90 bp TGCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCCTTGATTCCTTCCGTCTaGGCACGGATTTTAATGATC +
Preference number: 4 (lower is better)
Translates to: CWPHAQTRSEPFGRRSTALIPSV*ARILMI
Trigger: GATCATTAAAATCCGTGCCCAGACGGAAGGAATCAA...GGCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR CCA 90 bp GACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATCCTGAGTACCTCAGTGTaGTCTTGGTGCCAATCTCCC +
Preference number: 4 (lower is better)
Translates to: DPGQAHLGSLLLLKTSAILSTSV*SWCQSP
Trigger: GGGAGATTGGCACCAAGACCACACTGAGGTACTCAG...GATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CCA 90 bp GGCCACACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCCAGAAGGTTTCCAGATGAGCTaGACAAGCATGTTCATTGAG +
Preference number: 4 (lower is better)
Translates to: GHTHRQGPSPSGGVLPPEGFQMS*TSMFIE
Trigger: CTCAATGAACATGCTTGTCCAGCTCATCTGGAAACC...TTCTGGCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CCA 90 bp GCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCCACTCTGCCAACAGGAATaGAATTTGAAGGTGCTATCA +
Preference number: 4 (lower is better)
Translates to: AGHTHRQGPSPSGGVLPPLCQQE*NLKVLS
Trigger: TGATAGCACCTTCAAATTCCATTCCTGTTGGCAGAG...TGGCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR TCA 90 bp AAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCCGCGGTGCAGGTAGGTaGAGCACTCAATGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: KVLSSHFSICWPHAQTRSRGAGR*STQCPA
Trigger: TGCTGGACATTGAGTGCTTCACCTACCTGCACCGCG...GGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR TCA 90 bp AGGCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAAAATGCTTTCCACACTaGACTGACAGCGCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: RLDPGQAHLGSLLLLKTSKCFPH*TDSAAD
Trigger: GTCTGCAGCGCTGTCAGTTCAGTGTGGAAAGCATTT...TGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR TCA 90 bp TTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTATCTTCCCAACCTCATaGATCTCATCGCCACCATCT +
Preference number: 4 (lower is better)
Translates to: FSICWPHAQTRSEPFGRRIFPTS*ISSPPS
Trigger: AGATGGTGGCGATGAGATTCATGAGGTTGGGAAGAT...ACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR TCA 90 bp CACACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCCAGAATCTGACAAGCATGTTCATTaGGTCATGGGACCTGATGAC +
Preference number: 4 (lower is better)
Translates to: HTHRQGPSPSGGVLPPESDKHVH*VMGPDD
Trigger: GTCATCAGGTCCCATGACTCAATGAACATGCTTGTC...AGATTCTGGCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472125.5
ENST00000643535.1
CDS-3UTR GCA 90 bp CTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCGCCACATCCAAGTCATaGAAGGTCACATCTTGGATG +
Preference number: 4 (lower is better)
Translates to: LDPGQAHLGSLLLLKTSAATSKS*KVTSWM
Trigger: CATCCAAGATGTGACCTTGCATGACTTGGATGTGGC...GGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR GCA 90 bp TTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTGCCACATCCAAGTCATaGAAGGTCACATCTTGGATG +
Preference number: 4 (lower is better)
Translates to: FSICWPHAQTRSEPFGRRATSKS*KVTSWM
Trigger: CATCCAAGATGTGACCTTGCATGACTTGGATGTGGC...ACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000643535.1
ENST00000646581.1
CDS-3UTR GCA 90 bp GCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCGCCACATCCAAGTCATaGAAGGTCACATCTTGGATG +
Preference number: 4 (lower is better)
Translates to: AGPRPGTPGESLTAENLSATSKS*KVTSWM
Trigger: CATCCAAGATGTGACCTTGCATGACTTGGATGTGGC...GCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR GCA 90 bp CGAGCCCTTCGGGAGGCGTTCTACCGCCAGAATCTTCCCAACCTCATGAATCTCGTTGCCTCGGTTGGATaGAAAGATGACGATGGGAGC +
Preference number: 4 (lower is better)
Translates to: RALREAFYRQNLPNLMNLVASVG*KDDDGS
Trigger: GCTCCCATCGTCATCTTTGCATCCAACCGAGGCAAC...GAGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAACGCCTCCCGAAGGGCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR GCA 90 bp ACACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCCAGAATCTTCCCCACTCTGTGGGGTaGACTGTCATCATATTGTGT +
Preference number: 4 (lower is better)
Translates to: TRTDKVRALREAFYRQNLPHSVG*TVIILC
Trigger: ACACAATATGATGACAGTGCACCCCACAGAGTGGGG...AAGATTCTGGCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR GCA 90 bp ACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCCAGAATCTTCCCAGCACTCTTCAGTCTaGACAGTCCTCAGTACAACT +
Preference number: 4 (lower is better)
Translates to: THRQGPSPSGGVLPPESSQHSSV*TVLSTT
Trigger: AGTTGTACTGAGGACTGTGCAGACTGAAGAGTGCTG...GGAAGATTCTGGCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR CCA 90 bp CCATCTGCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCTATCACGGCCCCACTGTTaGCTTCAATGTAAATCACAT +
Preference number: 4 (lower is better)
Translates to: PSAGHTHRQGPSPSGGVLSRPHC*LQCKSH
Trigger: ATGTGATTTACATTGAAGCCAACAGTGGGGCCGTGA...TAGAACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000643535.1
ENST00000646581.1
CDS-3UTR CCA 90 bp CACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCCAGAATCTTCCAAGGTCGAATTCTGTaGCATAGGTATCACACCTGC +
Preference number: 4 (lower is better)
Translates to: HAQTRSEPFGRRSTARIFQGRIL*HRYHTC
Trigger: GCAGGTGTGATACCTATGCCACAGAATTCGACCTTG...GAAGATTCTGGCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000643535.1
ENST00000646581.1
CDS-3UTR CCA 90 bp GCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCAAGGTCGAATTCTGTaGCATAGGTATCACACCTGC +
Preference number: 4 (lower is better)
Translates to: AGPRPGTPGESLTAENLSQGRIL*HRYHTC
Trigger: GCAGGTGTGATACCTATGCCACAGAATTCGACCTTG...GCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CCA 90 bp CTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCCAAGGTCGAATTCTGTaGCATAGGTATCACACCTGC +
Preference number: 4 (lower is better)
Translates to: LDPGQAHLGSLLLLKTSAQGRIL*HRYHTC
Trigger: GCAGGTGTGATACCTATGCCACAGAATTCGACCTTG...GGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CCA 90 bp GACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATCAGCTCAGCAATGCCCTaGTCGATGTACTTGTTCACC +
Preference number: 4 (lower is better)
Translates to: DPGQAHLGSLLLLKTSAISSAMP*SMYLFT
Trigger: GGTGAACAAGTACATCGACCAGGGCATTGCTGAGCT...GATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CCA 90 bp ACACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCCAGAATCTTAGCTCAGCAATGCCCTaGTCGATGTACTTGTTCACC +
Preference number: 4 (lower is better)
Translates to: TRTDKVRALREAFYRQNLSSAMP*SMYLFT
Trigger: GGTGAACAAGTACATCGACCAGGGCATTGCTGAGCT...AAGATTCTGGCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CCA 90 bp CTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATGTACTTATCCTGCTaGTCAGCCAGGATTTTGGCG +
Preference number: 4 (lower is better)
Translates to: LDPGQAHLGSLLLLKTSAMYLSC*SARILA
Trigger: CGCCAAAATCCTGGCTGACCAGCAGGATAAGTACAT...GGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CCA 90 bp GAAACGATGAGATGGTATTTGAAGGCAGCAGGTTTCCAGATGAGCTGGACAAGCTGCTTCAGGTCACGCTaGTCGACTGCCCCGGGCACG +
Preference number: 4 (lower is better)
Translates to: ETMRWYLKAAGFQMSWTSCFRSR*STAPGT
Trigger: CGTGCCCGGGGCAGTCGACCAGCGTGACCTGAAGCA...GCTTGTCCAGCTCATCTGGAAACCTGCTGCCTTCAAATACCATCTCATCGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR CCA 90 bp CGGGAGGCGTTCTACCGCCAGAATCTTCCCAACCTCATGAATCTCATCGCCACCCACTTTTCCATCTGCTaGCCACACGCACAGACAAGG +
Preference number: 4 (lower is better)
Translates to: REAFYRQNLPNLMNLIATHFSIC*PHAQTR
Trigger: CCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTG...GGTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAACGCCTCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR TCA 90 bp GCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCTTCTTGATCTCAGTTaGGTAAACTTCACTCCCCAC +
Preference number: 4 (lower is better)
Translates to: AGPRPGTPGESLTAENLSLLDLS*VNFTPH
Trigger: GTGGGGAGTGAAGTTTACTCAACTGAGATCAAGAAG...GCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR TCA 90 bp AAAGTCCAGGTGACCTTAGATGCTGCCACAGCACTCTTCAGTCTGCACAGTCCTCGCGGTGCAGGTAGGTaGAGCACTCAATGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: KVQVTLDAATALFSLHSPRGAGR*STQCPA
Trigger: TGCTGGACATTGAGTGCTTCACCTACCTGCACCGCG...AGGACTGTGCAGACTGAAGAGTGCTGTGGCAGCATCTAAGGTCACCTGGACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR TCA 90 bp GACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCCAGAATCTTCCCAACCTCAGGCTAGAAGCAAATTaGGTTGCCTGTTCGTTCCTT +
Preference number: 4 (lower is better)
Translates to: DKVRALREAFYRQNLPNLRLEAN*VACSFL
Trigger: AAGGAACGAACAGGCAACTCAATTTGCTTCTAGCCT...GAGGTTGGGAAGATTCTGGCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR TCA 90 bp CGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGGGAAGGCTAGAAGCAAATTaGGTTGCCTGTTCGTTCCTT +
Preference number: 4 (lower is better)
Translates to: RTFPSAGHTHRQGPSPSGRLEAN*VACSFL
Trigger: AAGGAACGAACAGGCAACTCAATTTGCTTCTAGCCT...TCCCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR GCA 90 bp TGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACAGGTATCACACCTGCCCTaGCTCTTCACGGCCCCACTG +
Preference number: 4 (lower is better)
Translates to: WNLKVLSSHFSICWPHAQVSHLP*LFTAPL
Trigger: CAGTGGGGCCGTGAAGAGGCAGGGCAGGTGTGATAC...CTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000643535.1
ENST00000646581.1
CDS-3UTR GCA 90 bp GACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATCGCCACATCCAAGTCATaGAAGGTCACATCTTGGATG +
Preference number: 4 (lower is better)
Translates to: DPGQAHLGSLLLLKTSAIATSKS*KVTSWM
Trigger: CATCCAAGATGTGACCTTGCATGACTTGGATGTGGC...GATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR GCA 90 bp GGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATGCCACATCCAAGTCATaGAAGGTCACATCTTGGATG +
Preference number: 4 (lower is better)
Translates to: GPRPGTPGESLTAENLSHATSKS*KVTSWM
Trigger: CATCCAAGATGTGACCTTGCATGACTTGGATGTGGC...ATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR GCA 90 bp TCGGGAGGCGTTCTACCGCCAGAATCTTCCCAACCTCATGAATCTCATCGCCACGGACCAGCTCAGCAATaGCCTGGTCGATGTACTTGT +
Preference number: 4 (lower is better)
Translates to: SGGVLPPESSQPHESHRHGPAQQ*PGRCTC
Trigger: ACAAGTACATCGACCAGGGCATTGCTGAGCTGGTCC...GTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAACGCCTCCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR GCA 90 bp GGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCGAGTTGCCTCGGTTGGATaGAAAGATGACGATGGGAGC +
Preference number: 4 (lower is better)
Translates to: GAIIALFHLLATRTDKVRVASVG*KDDDGS
Trigger: GCTCCCATCGTCATCTTTGCATCCAACCGAGGCAAC...TCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR GCA 90 bp CTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCCTGATCTCTTCGACATaGTCTTTCTCAATGCTGTCC +
Preference number: 4 (lower is better)
Translates to: LDPGQAHLGSLLLLKTSALISST*SFSMLS
Trigger: GGACAGCATTGAGAAAGAGCATGTCGAAGAGATCAG...GGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR GCA 90 bp CCAGAATCTTCCCAACCTCATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTAGCCCGGCGAGCCACTaGTTCAGGTCACGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: PESSQPHESHRHHLCLCSSPASH*FRSRWS
Trigger: CGACCAGCGTGACCTGAAGCAGTGGCTCGCCGGGCT...ACTGCAAAGACAAAGATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR GCA 90 bp AATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACAGACAGATCTGGGCTTCTCGTaGTTCTCGGTGCCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: NLKVLSSHFSICWPHAQTDLGFS*FSVPLP
Trigger: GGGCAGCGGCACCGAGAAGCACGAGAAGCCCAGATC...TGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR GCA 90 bp GGAGGCGTTCTACCGCCAGAATCTTCCCAACCTCATGAATCTCATCGCCACCATTCAGAATGCCTTGTGTaGAGTCCCCCACTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: GGVLPPESSQPHESHRHHSECLV*SPPLCG
Trigger: CCCACAGAGTGGGGGACTGCACACAAGGCATTCTGA...ATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAACGCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR GCA 90 bp TCGGGAGGCGTTCTACCGCCAGAATCTTCCCAACCTCATGAATCTCATCGCCACTTGAGTCATGGGACCTaGCAGGCTGTGGTGAGAGTT +
Preference number: 4 (lower is better)
Translates to: SGGVLPPESSQPHESHRHLSHGT*QAVVRV
Trigger: AACTCTCACCACAGCCTGGCAGGTCCCATGACTCAA...GTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAACGCCTCCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR CCA 90 bp AGGCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCACAAGGTCGAATTCTGTaGCATAGGTATCACACCTGC +
Preference number: 4 (lower is better)
Translates to: RLDPGQAHLGSLLLLKTSQGRIL*HRYHTC
Trigger: GCAGGTGTGATACCTATGCCACAGAATTCGACCTTG...TGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CCA 90 bp CACACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCCAGAATCTGTGGAGTATACAGCATaGTCCGGATTATCATCACTC +
Preference number: 4 (lower is better)
Translates to: HTHRQGPSPSGGVLPPESVEYTA*SGLSSL
Trigger: GAGTGATGATAATCCGGACCATGCTGTATACTCCAC...AGATTCTGGCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CCA 90 bp CTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCGTGGAGTATACAGCATaGTCCGGATTATCATCACTC +
Preference number: 4 (lower is better)
Translates to: LDPGQAHLGSLLLLKTSAVEYTA*SGLSSL
Trigger: GAGTGATGATAATCCGGACCATGCTGTATACTCCAC...GGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CCA 90 bp CTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCCTGTTTCATTTCCTGTaGAGTATACAGCATGGTCCG +
Preference number: 4 (lower is better)
Translates to: LDPGQAHLGSLLLLKTSALFHFL*SIQHGP
Trigger: CGGACCATGCTGTATACTCCACAGGAAATGAAACAG...GGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CCA 90 bp CTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTGATTCCTTCCGTCTaGGCACGGATTTTAATGATC +
Preference number: 4 (lower is better)
Translates to: LFHLLATRTDKVRALREALIPSV*ARILMI
Trigger: GATCATTAAAATCCGTGCCCAGACGGAAGGAATCAA...CGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR CCA 90 bp GGAGGCGTTCTACCGCCAGAATCTTCCCAACCTCATGAATCTCATCGCCACCATACCTCAGTGTGGTCTTaGTGCCAATCTCCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: GGVLPPESSQPHESHRHHTSVWS*CQSPPG
Trigger: ACCTGGGGGAGATTGGCACCAAGACCACACTGAGGT...ATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAACGCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR CCA 90 bp GGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATATGTACTTATCCTGCTaGTCAGCCAGGATTTTGGCG +
Preference number: 4 (lower is better)
Translates to: GPRPGTPGESLTAENLSHMYLSC*SARILA
Trigger: CGCCAAAATCCTGGCTGACCAGCAGGATAAGTACAT...ATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CCA 90 bp GACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATCATGTACTTATCCTGCTaGTCAGCCAGGATTTTGGCG +
Preference number: 4 (lower is better)
Translates to: DPGQAHLGSLLLLKTSAIMYLSC*SARILA
Trigger: CGCCAAAATCCTGGCTGACCAGCAGGATAAGTACAT...GATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CCA 90 bp CGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGGGACCCAGGGAGTTTCCATaGTCTGGATTTAAGTTTCAG +
Preference number: 4 (lower is better)
Translates to: RTFPSAGHTHRQGPSPSGPREFP*SGFKFQ
Trigger: CTGAAACTTAAATCCAGACCATGGAAACTCCCTGGG...TCCCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CCA 90 bp GACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCCAGAATCTTCCCAACCTCCCCAGGGAGTTTCCATaGTCTGGATTTAAGTTTCAG +
Preference number: 4 (lower is better)
Translates to: DKVRALREAFYRQNLPNLPREFP*SGFKFQ
Trigger: CTGAAACTTAAATCCAGACCATGGAAACTCCCTGGG...GAGGTTGGGAAGATTCTGGCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CCA 90 bp TCGGGAGGCGTTCTACCGCCAGAATCTTCCCAACCTCATGAATCTCATCGCCACCACTTTTCCATCTGCTaGCCACACGCACAGACAAGG +
Preference number: 4 (lower is better)
Translates to: SGGVLPPESSQPHESHRHHFSIC*PHAQTR
Trigger: CCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTG...GTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAACGCCTCCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
3UTR CAA 72 bp GGGCCAGAGGTGATGGTGCCAGATACAGCTGTACCCTaGGAGATGGAGCAGTTAGGTAAGGAAGGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: GPEVMVPDTAVP*EMEQLGKEGQS
Trigger: ACTTTGCCCTTCCTTACCTAACTGCTCCATCTCCAAGGGTACAGCTGTATCTGGCACCATCACCTCTGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR TCA 90 bp GCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCGCACCTCTGTCTTCTTaGTCTCAGTTGAGTAAACTT +
Preference number: 4 (lower is better)
Translates to: AGPRPGTPGESLTAENLSAPLSS*SQLSKL
Trigger: AAGTTTACTCAACTGAGATCAAGAAGACAGAGGTGC...GCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR TCA 90 bp CTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCACGGAGTTAGCTCTGTaGCTTCACCTTCATAAACTT +
Preference number: 4 (lower is better)
Translates to: LDPGQAHLGSLLLLKTSATELAL*LHLHKL
Trigger: AAGTTTATGAAGGTGAAGTCACAGAGCTAACTCCGT...GGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR TCA 90 bp GCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCTCGAAGTTTGTCTGTaGTTTCTGTCTTCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: AGPRPGTPGESLTAENLSLEVCL*FLSSLA
Trigger: AGCCAAAGAAGACAGAAATCACAGACAAACTTCGAG...GCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR TCA 90 bp GGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCCGCGGTGCAGGTAGGTaGAGCACTCAATGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GMEFEGAIIALFHLLATRRGAGR*STQCPA
Trigger: TGCTGGACATTGAGTGCTTCACCTACCTGCACCGCG...GCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR TCA 90 bp CTATTTCCAGGTGTGTCCAGATCCAACCCCAGGGAGTTTCCATGGTCTGGATTTCGCGGTGCAGGTAGGTaGAGCACTCAATGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LFPGVSRSNPREFPWSGFRGAGR*STQCPA
Trigger: TGCTGGACATTGAGTGCTTCACCTACCTGCACCGCG...AAATCCAGACCATGGAAACTCCCTGGGGTTGGATCTGGACACACCTGGAAATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
CDS-3UTR TCA 90 bp TATTGTGTTGAAACGATGAGATGGTATTTGAAGGCAGCAGGTTTCCAGATGAGCCTCCACCGCCGCCTTTaGCAAGCAGCCGCAGAGCCG +
Preference number: 4 (lower is better)
Translates to: YCVETMRWYLKAAGFQMSLHRRL*QAAAEP
Trigger: CGGCTCTGCGGCTGCTTGTCAAAGGCGGCGGTGGAG...GCTCATCTGGAAACCTGCTGCCTTCAAATACCATCTCATCGTTTCAACACAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR TCA 90 bp CCGAGCCCTTCGGGAGGCGTTCTACCGCCAGAATCTTCCCAACCTCATGAATCTATCTTCCCAACCTCATaGATCTCATCGCCACCATCT +
Preference number: 4 (lower is better)
Translates to: PSPSGGVLPPESSQPHESIFPTS*ISSPPS
Trigger: AGATGGTGGCGATGAGATTCATGAGGTTGGGAAGAT...AGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAACGCCTCCCGAAGGGCTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR TCA 90 bp GACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCCAGAATCTTCCCAACCTCAACAGGAATGGAATTTaGAGGTGCTATCATCGCACT +
Preference number: 4 (lower is better)
Translates to: DKVRALREAFYRQNLPNLNRNGI*RCYHRT
Trigger: AGTGCGATGATAGCACCTTCAAATTCCATTCCTGTT...GAGGTTGGGAAGATTCTGGCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR TCA 90 bp CTGCCAACAGGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGCCTGCCAGGCTGTGGTaGGAGTTTGGGCCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: LPTGMEFEGAIIALFHLLPARLW*EFGPEV
Trigger: CACCTCTGGCCCAAACTCTCACCACAGCCTGGCAGG...CAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCATTCCTGTTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR GCA 90 bp AGGCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCACCTCAATCTTCATTTTaGAGACGCCGGGAGCTAAAA +
Preference number: 4 (lower is better)
Translates to: RLDPGQAHLGSLLLLKTSPQSSF*RRRELK
Trigger: TTTTAGCTCCCGGCGTCTGCAAAATGAAGATTGAGG...TGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR GCA 90 bp GACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATCCTGATCTCTTCGACATaGTCTTTCTCAATGCTGTCC +
Preference number: 4 (lower is better)
Translates to: DPGQAHLGSLLLLKTSAILISST*SFSMLS
Trigger: GGACAGCATTGAGAAAGAGCATGTCGAAGAGATCAG...GATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR GCA 90 bp AAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCTCGCACTTTTCCATCTaGTGGCCACACGCACAGACA +
Preference number: 4 (lower is better)
Translates to: KVLSSHFSICWPHAQTRSSHFSI*WPHAQT
Trigger: TGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGA...GGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CCA 90 bp ACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCCAGAATCTTCCCTTCATAAACTTCCTTaGTCTCCTTTATTCGCAGCC +
Preference number: 4 (lower is better)
Translates to: THRQGPSPSGGVLPPESSLHKLP*SPLFAA
Trigger: GGCTGCGAATAAAGGAGACCAAGGAAGTTTATGAAG...GGAAGATTCTGGCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR CCA 90 bp CTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCCTTCATAAACTTCCTTaGTCTCCTTTATTCGCAGCC +
Preference number: 4 (lower is better)
Translates to: LDPGQAHLGSLLLLKTSALHKLP*SPLFAA
Trigger: GGCTGCGAATAAAGGAGACCAAGGAAGTTTATGAAG...GGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR CCA 90 bp AGGCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCATCACGGCCCCACTGTTaGCTTCAATGTAAATCACAT +
Preference number: 4 (lower is better)
Translates to: RLDPGQAHLGSLLLLKTSSRPHC*LQCKSH
Trigger: ATGTGATTTACATTGAAGCCAACAGTGGGGCCGTGA...TGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR CCA 90 bp GGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATTCACGGCCCCACTGTTaGCTTCAATGTAAATCACAT +
Preference number: 4 (lower is better)
Translates to: GPRPGTPGESLTAENLSHSRPHC*LQCKSH
Trigger: ATGTGATTTACATTGAAGCCAACAGTGGGGCCGTGA...ATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR CCA 90 bp GGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATGTGGAGTATACAGCATaGTCCGGATTATCATCACTC +
Preference number: 4 (lower is better)
Translates to: GPRPGTPGESLTAENLSHVEYTA*SGLSSL
Trigger: GAGTGATGATAATCCGGACCATGCTGTATACTCCAC...ATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CCA 90 bp GACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATCCTGTTTCATTTCCTGTaGAGTATACAGCATGGTCCG +
Preference number: 4 (lower is better)
Translates to: DPGQAHLGSLLLLKTSAILFHFL*SIQHGP
Trigger: CGGACCATGCTGTATACTCCACAGGAAATGAAACAG...GATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CCA 90 bp CATCGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGCTGTTTCATTTCCTGTaGAGTATACAGCATGGTCCG +
Preference number: 4 (lower is better)
Translates to: HRTFPSAGHTHRQGPSPSLFHFL*SIQHGP
Trigger: CGGACCATGCTGTATACTCCACAGGAAATGAAACAG...CGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CCA 90 bp AGGCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCACTGTTTCATTTCCTGTaGAGTATACAGCATGGTCCG +
Preference number: 4 (lower is better)
Translates to: RLDPGQAHLGSLLLLKTSLFHFL*SIQHGP
Trigger: CGGACCATGCTGTATACTCCACAGGAAATGAAACAG...TGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CCA 90 bp GCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCTTGATTCCTTCCGTCTaGGCACGGATTTTAATGATC +
Preference number: 4 (lower is better)
Translates to: AGPRPGTPGESLTAENLSLIPSV*ARILMI
Trigger: GATCATTAAAATCCGTGCCCAGACGGAAGGAATCAA...GCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CCA 90 bp CTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCTTGATTCCTTCCGTCTaGGCACGGATTTTAATGATC +
Preference number: 4 (lower is better)
Translates to: LDPGQAHLGSLLLLKTSALIPSV*ARILMI
Trigger: GATCATTAAAATCCGTGCCCAGACGGAAGGAATCAA...GGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CCA 90 bp GCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCTTTTGGCGGAGGACTTaGCATCATAGAAAAGTTCAC +
Preference number: 4 (lower is better)
Translates to: AGPRPGTPGESLTAENLSFWRRT*HHRKVH
Trigger: GTGAACTTTTCTATGATGCCAAGTCCTCCGCCAAAA...GCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CCA 90 bp CTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCTTTTGGCGGAGGACTTaGCATCATAGAAAAGTTCAC +
Preference number: 4 (lower is better)
Translates to: LDPGQAHLGSLLLLKTSAFWRRT*HHRKVH
Trigger: GTGAACTTTTCTATGATGCCAAGTCCTCCGCCAAAA...GGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CCA 90 bp CTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGATGTTCATTGAGTCATaGGACCTGTTTCATTTCCTG +
Preference number: 4 (lower is better)
Translates to: LFHLLATRTDKVRALREAMFIES*DLFHFL
Trigger: CAGGAAATGAAACAGGTCCCATGACTCAATGAACAT...CGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR CCA 90 bp AGTCCAGGTGACCTTAGATGCTGCCACAGCACTCTTCAGTCTGCACAGTCCTCACACTTTTCCATCTGCTaGCCACACGCACAGACAAGG +
Preference number: 4 (lower is better)
Translates to: SPGDLRCCHSTLQSAQSSHFSIC*PHAQTR
Trigger: CCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTG...TGAGGACTGTGCAGACTGAAGAGTGCTGTGGCAGCATCTAAGGTCACCTGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR CCA 90 bp GAGGCGTTCTACCGCCAGAATCTTCCCAACCTCATGAATCTCATCGCCACCATCCACTTTTCCATCTGCTaGCCACACGCACAGACAAGG +
Preference number: 4 (lower is better)
Translates to: EAFYRQNLPNLMNLIATIHFSIC*PHAQTR
Trigger: CCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTG...GATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAACGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CCA 90 bp GCACTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGGGAGATGTTCATTGAGTCATaGGACCTGATGACACAGTTG +
Preference number: 4 (lower is better)
Translates to: ALFHLLATRTDKVRALREMFIES*DLMTQL
Trigger: CAACTGTGTCATCAGGTCCCATGACTCAATGAACAT...CTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472125.5
ENST00000643535.1
CDS-3UTR CCA 90 bp TGTGTGCAGTCCCCCACTCTGTGGGGTGCACTGTCATCATATTGTGTTGAAACGGGCCTTACCTCAGTGTaGTCTTGGTGCCAATCTCCC +
Preference number: 4 (lower is better)
Translates to: CVQSPTLWGALSSYCVETGLTSV*SWCQSP
Trigger: GGGAGATTGGCACCAAGACCACACTGAGGTAAGGCC...CGTTTCAACACAATATGATGACAGTGCACCCCACAGAGTGGGGGACTGCACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR TCA 90 bp AGGCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCACCTCTGTCTTCTTaGTCTCAGTTGAGTAAACTT +
Preference number: 4 (lower is better)
Translates to: RLDPGQAHLGSLLLLKTSAPLSS*SQLSKL
Trigger: AAGTTTACTCAACTGAGATCAAGAAGACAGAGGTGC...TGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR TCA 90 bp AGGCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAACGGAGTTAGCTCTGTaGCTTCACCTTCATAAACTT +
Preference number: 4 (lower is better)
Translates to: RLDPGQAHLGSLLLLKTSTELAL*LHLHKL
Trigger: AAGTTTATGAAGGTGAAGTCACAGAGCTAACTCCGT...TGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR TCA 90 bp ACACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCCAGAATCTTCTCGAAGTTTGTCTGTaGTTTCTGTCTTCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: TRTDKVRALREAFYRQNLLEVCL*FLSSLA
Trigger: AGCCAAAGAAGACAGAAATCACAGACAAACTTCGAG...AAGATTCTGGCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000643535.1
ENST00000646581.1
CDS-3UTR TCA 90 bp GGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATCTCGAAGTTTGTCTGTaGTTTCTGTCTTCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: GPRPGTPGESLTAENLSHLEVCL*FLSSLA
Trigger: AGCCAAAGAAGACAGAAATCACAGACAAACTTCGAG...ATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR TCA 90 bp GACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATCCTCGAAGTTTGTCTGTaGTTTCTGTCTTCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: DPGQAHLGSLLLLKTSAILEVCL*FLSSLA
Trigger: AGCCAAAGAAGACAGAAATCACAGACAAACTTCGAG...GATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR TCA 90 bp AGGCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCACTCGAAGTTTGTCTGTaGTTTCTGTCTTCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: RLDPGQAHLGSLLLLKTSLEVCL*FLSSLA
Trigger: AGCCAAAGAAGACAGAAATCACAGACAAACTTCGAG...TGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR TCA 90 bp GCGTTCTACCGCCAGAATCTTCCCAACCTCATGAATCTCATCGCCACCATCTTTTCAAGAGGGATGCCGTaGGGGGATGTGATGTCCTCA +
Preference number: 4 (lower is better)
Translates to: AFYRQNLPNLMNLIATIFSRGMP*GDVMSS
Trigger: TGAGGACATCACATCCCCTCACGGCATCCCTCTTGA...AAAGATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAACGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
CDS-3UTR TCA 90 bp TTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGTCAAGAGGGATGCCGTaGGGGGATGTGATGTCCTCA +
Preference number: 4 (lower is better)
Translates to: FEGAIIALFHLLATRTDKSRGMP*GDVMSS
Trigger: TGAGGACATCACATCCCCTCACGGCATCCCTCTTGA...CTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
CDS-3UTR TCA 90 bp CAGACAAATGAGCATGGCCGTGTTCCTACAAAGCTGGCTACAAAGTCAGCTGCATCAAGAGGGATGCCGTaGGGGGATGTGATGTCCTCA +
Preference number: 4 (lower is better)
Translates to: QTNEHGRVPTKLATKSAASRGMP*GDVMSS
Trigger: TGAGGACATCACATCCCCTCACGGCATCCCTCTTGA...TGCAGCTGACTTTGTAGCCAGCTTTGTAGGAACACGGCCATGCTCATTTGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR TCA 90 bp TTTGCAGTGGTCATCTATTTCCAGGTGTGTCCAGATCCAACCCCAGGGAGTTTCTCAAGAGGGATGCCGTaGGGGGATGTGATGTCCTCA +
Preference number: 4 (lower is better)
Translates to: FAVVIYFQVCPDPTPGSFSRGMP*GDVMSS
Trigger: TGAGGACATCACATCCCCTCACGGCATCCCTCTTGA...GAAACTCCCTGGGGTTGGATCTGGACACACCTGGAAATAGATGACCACTGCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
CDS-3UTR TCA 90 bp CTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCCATAGAAAAGTTCACTaGTCTCTTCGACATGCTCTT +
Preference number: 4 (lower is better)
Translates to: LDPGQAHLGSLLLLKTSAHRKVH*SLRHAL
Trigger: AAGAGCATGTCGAAGAGATCAGTGAACTTTTCTATG...GGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR TCA 90 bp CGGGAGGCGTTCTACCGCCAGAATCTTCCCAACCTCATGAATCTCATCGCCACCAGGCTAGAAGCAAATTaGGTTGCCTGTTCGTTCCTT +
Preference number: 4 (lower is better)
Translates to: REAFYRQNLPNLMNLIATRLEAN*VACSFL
Trigger: AAGGAACGAACAGGCAACTCAATTTGCTTCTAGCCT...GGTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAACGCCTCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR TCA 90 bp TGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACAGAGTTTGGGCCAGAGGTaGTGGTGCCAGATACAGCTG +
Preference number: 4 (lower is better)
Translates to: WNLKVLSSHFSICWPHAQSLGQR*WCQIQL
Trigger: CAGCTGTATCTGGCACCATCACCTCTGGCCCAAACT...CTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR TCA 90 bp GAGGTGATGGTGCCAGATACAGCTGTACCCTTGGAGATGGAGCAGTTAGGTAAGGACAAGCATGTTCATTaGGTCATGGGACCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: EVMVPDTAVPLEMEQLGKDKHVH*VMGPAR
Trigger: CCTGGCAGGTCCCATGACTCAATGAACATGCTTGTC...CTTACCTAACTGCTCCATCTCCAAGGGTACAGCTGTATCTGGCACCATCACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR TCA 90 bp TGTGTGCAGTCCCCCACTCTGTGGGGTGCACTGTCATCATATTGTGTTGAAACGGACAAGCATGTTCATTaGGTCATGGGACCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: CVQSPTLWGALSSYCVETDKHVH*VMGPAR
Trigger: CCTGGCAGGTCCCATGACTCAATGAACATGCTTGTC...CGTTTCAACACAATATGATGACAGTGCACCCCACAGAGTGGGGGACTGCACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR GCA 90 bp GAGTTGCCTGTTCGTTCCTTCATATATGTCTCCTCCTCTGCCAACAGGAATGGAGAGCCAGAGCTGTCTTaGCAGTTCCAGGAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: ELPVRSFIYVSSSANRNGEPELS*QFQEVL
Trigger: CAGGACCTCCTGGAACTGGCAAGACAGCTCTGGCTC...TCCATTCCTGTTGGCAGAGGAGGAGACATATATGAAGGAACGAACAGGCAACTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR GCA 90 bp CTCTGCCAACAGGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCGTATCACACCTGCCCTaGCTCTTCACGGCCCCACTG +
Preference number: 4 (lower is better)
Translates to: LCQQEWNLKVLSSHFSICVSHLP*LFTAPL
Trigger: CAGTGGGGCCGTGAAGAGGCAGGGCAGGTGTGATAC...GCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCATTCCTGTTGGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000643535.1
ENST00000646581.1
CDS-3UTR GCA 90 bp AATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACAGACACATAGGTATCACACCTaGCCTGCCTCTTCACGGCCC +
Preference number: 4 (lower is better)
Translates to: NLKVLSSHFSICWPHAQTHRYHT*PASSRP
Trigger: GGGCCGTGAAGAGGCAGGGCAGGTGTGATACCTATG...TGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000643535.1
ENST00000646581.1
CDS-3UTR GCA 90 bp GGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCGAGCCACATCCAAGTCATaGAAGGTCACATCTTGGATG +
Preference number: 4 (lower is better)
Translates to: GAIIALFHLLATRTDKVRATSKS*KVTSWM
Trigger: CATCCAAGATGTGACCTTGCATGACTTGGATGTGGC...TCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000643535.1
ENST00000646581.1
CDS-3UTR GCA 90 bp TTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGTCAGTGTGGTCTTGGTaGCAATCTCCCCCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: FEGAIIALFHLLATRTDKSVWSW*QSPPGG
Trigger: ACCACCTGGGGGAGATTGGCACCAAGACCACACTGA...CTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR GCA 90 bp TTTTATTTGTCTGCTAAGAAGGCTAGAAGCAAATTGAGTTGCCTGTTCGTTCCTCGCTGCCCGCGCGCCTaGGGTCGTCTTTGCCCGAGT +
Preference number: 4 (lower is better)
Translates to: FYLSAKKARSKLSCLFVPRCPRA*GRLCPS
Trigger: ACTCGGGCAAAGACGACCGCAGGCGCGCGGGCAGCG...AGGAACGAACAGGCAACTCAATTTGCTTCTAGCCTTCTTAGCAGACAAATAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR GCA 90 bp CAGACAAATGAGCATGGCCGTGTTCCTACAAAGCTGGCTACAAAGTCAGCTGCATCAGAATGCCTTGTGTaGAGTCCCCCACTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: QTNEHGRVPTKLATKSAASECLV*SPPLCG
Trigger: CCCACAGAGTGGGGGACTGCACACAAGGCATTCTGA...TGCAGCTGACTTTGTAGCCAGCTTTGTAGGAACACGGCCATGCTCATTTGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR GCA 90 bp ACACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCCAGAATCTTATATGTCTCCTCCTCTaGCAACAGGAATGGAATTTG +
Preference number: 4 (lower is better)
Translates to: TRTDKVRALREAFYRQNLICLLL*QQEWNL
Trigger: CAAATTCCATTCCTGTTGGCAGAGGAGGAGACATAT...AAGATTCTGGCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CCA 90 bp AGCCCTTCGGGAGGCGTTCTACCGCCAGAATCTTCCCAACCTCATGAATCTCATAGCTCAGCAATGCCCTaGTCGATGTACTTGTTCACC +
Preference number: 4 (lower is better)
Translates to: SPSGGVLPPESSQPHESHSSAMP*SMYLFT
Trigger: GGTGAACAAGTACATCGACCAGGGCATTGCTGAGCT...ATGAGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAACGCCTCCCGAAGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CCA 90 bp GACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATCTTGATTCCTTCCGTCTaGGCACGGATTTTAATGATC +
Preference number: 4 (lower is better)
Translates to: DPGQAHLGSLLLLKTSAILIPSV*ARILMI
Trigger: GATCATTAAAATCCGTGCCCAGACGGAAGGAATCAA...GATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CCA 90 bp AGGCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCATTTTGGCGGAGGACTTaGCATCATAGAAAAGTTCAC +
Preference number: 4 (lower is better)
Translates to: RLDPGQAHLGSLLLLKTSFWRRT*HHRKVH
Trigger: GTGAACTTTTCTATGATGCCAAGTCCTCCGCCAAAA...TGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CCA 90 bp GCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCTGGGTACAAGATACATaGGAACTCCCTATTGTATGT +
Preference number: 4 (lower is better)
Translates to: AGPRPGTPGESLTAENLSWVQDT*ELPIVC
Trigger: ACATACAATAGGGAGTTCCCATGTATCTTGTACCCA...GCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR CCA 90 bp ATCGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGGGTTGAAACGATGAGATaGTATTTGAAGGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: IALFHLLATRTDKVRALRVETMR*YLKAAG
Trigger: ACCTGCTGCCTTCAAATACCATCTCATCGTTTCAAC...CCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CCA 90 bp ACACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCCAGAATCTTGTTGAAACGATGAGATaGTATTTGAAGGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: TRTDKVRALREAFYRQNLVETMR*YLKAAG
Trigger: ACCTGCTGCCTTCAAATACCATCTCATCGTTTCAAC...AAGATTCTGGCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CCA 90 bp ATCGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGGCTCTGCCAACAGGAATaGAATTTGAAGGTGCTATCA +
Preference number: 4 (lower is better)
Translates to: IALFHLLATRTDKVRALRLCQQE*NLKVLS
Trigger: TGATAGCACCTTCAAATTCCATTCCTGTTGGCAGAG...CCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR TCA 90 bp GCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCAGGTCACATCTTGGATaGTTTCTTTCTTTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: AGPRPGTPGESLTAENLSRSHLG*FLSFCA
Trigger: TGCACAAAAAGAAAGAAATCATCCAAGATGTGACCT...GCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR TCA 90 bp GGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATCATAGAAAAGTTCACTaGTCTCTTCGACATGCTCTT +
Preference number: 4 (lower is better)
Translates to: GPRPGTPGESLTAENLSHHRKVH*SLRHAL
Trigger: AAGAGCATGTCGAAGAGATCAGTGAACTTTTCTATG...ATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR TCA 90 bp CGCCAGAATCTTCCCAACCTCATGAATCTCATCGCCACCATCTTTGTCTTTGCAAAACCCTGCCTACGGTaGCCTCCAGTTCCTAGACCA +
Preference number: 4 (lower is better)
Translates to: RQNLPNLMNLIATIFVFAKPCLR*PPVPRP
Trigger: TGGTCTAGGAACTGGAGGTCACCGTAGGCAGGGTTT...TGCAAAGACAAAGATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR TCA 90 bp AAATTGAGTTGCCTGTTCGTTCCTTCATATATGTCTCCTCCTCTGCCAACAGGAGCAGGAGGAGCCACGTaGGAGAGAAACCCTGCCTAC +
Preference number: 4 (lower is better)
Translates to: KLSCLFVPSYMSPPLPTGAGGAT*ERNPAY
Trigger: GTAGGCAGGGTTTCTCTCTCACGTGGCTCCTCCTGC...TCCTGTTGGCAGAGGAGGAGACATATATGAAGGAACGAACAGGCAACTCAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR TCA 90 bp TCGGGAGGCGTTCTACCGCCAGAATCTTCCCAACCTCATGAATCTCATCGCCACGACAAGCATGTTCATTaGGTCATGGGACCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: SGGVLPPESSQPHESHRHDKHVH*VMGPVS
Trigger: TGAAACAGGTCCCATGACTCAATGAACATGCTTGTC...GTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAACGCCTCCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR TCA 90 bp GAGGCGTTCTACCGCCAGAATCTTCCCAACCTCATGAATCTCATCGCCACCATCATCTTCCCAACCTCATaGATCTCATCGCCACCATCT +
Preference number: 4 (lower is better)
Translates to: EAFYRQNLPNLMNLIATIIFPTS*ISSPPS
Trigger: AGATGGTGGCGATGAGATTCATGAGGTTGGGAAGAT...GATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAACGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR TCA 90 bp TCGGGAGGCGTTCTACCGCCAGAATCTTCCCAACCTCATGAATCTCATCGCCACAGGCTAGAAGCAAATTaGGTTGCCTGTTCGTTCCTT +
Preference number: 4 (lower is better)
Translates to: SGGVLPPESSQPHESHRHRLEAN*VACSFL
Trigger: AAGGAACGAACAGGCAACTCAATTTGCTTCTAGCCT...GTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAACGCCTCCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR TCA 90 bp GAGGCGTTCTACCGCCAGAATCTTCCCAACCTCATGAATCTCATCGCCACCATCGACAAGCATGTTCATTaGGTCATGGGACCTGATGAC +
Preference number: 4 (lower is better)
Translates to: EAFYRQNLPNLMNLIATIDKHVH*VMGPDD
Trigger: GTCATCAGGTCCCATGACTCAATGAACATGCTTGTC...GATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAACGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472125.5
ENST00000643535.1
CDS-3UTR GCA 90 bp CCTCTGCCAACAGGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGGAGCCAGAGCTGTCTTaGCAGTTCCAGGAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: PLPTGMEFEGAIIALFHLEPELS*QFQEVL
Trigger: CAGGACCTCCTGGAACTGGCAAGACAGCTCTGGCTC...CAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCATTCCTGTTGGCAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR GCA 90 bp CCTCTGCCAACAGGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCATAGGTATCACACCTaGCCTGCCTCTTCACGGCCC +
Preference number: 4 (lower is better)
Translates to: PLPTGMEFEGAIIALFHLHRYHT*PASSRP
Trigger: GGGCCGTGAAGAGGCAGGGCAGGTGTGATACCTATG...CAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCATTCCTGTTGGCAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000643535.1
ENST00000646581.1
CDS-3UTR GCA 90 bp TTGAGTTGCCTGTTCGTTCCTTCATATATGTCTCCTCCTCTGCCAACAGGAATGCATAGGTATCACACCTaGCCTGCCTCTTCACGGCCC +
Preference number: 4 (lower is better)
Translates to: LSCLFVPSYMSPPLPTGMHRYHT*PASSRP
Trigger: GGGCCGTGAAGAGGCAGGGCAGGTGTGATACCTATG...CATTCCTGTTGGCAGAGGAGGAGACATATATGAAGGAACGAACAGGCAACTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000643535.1
ENST00000646581.1
CDS-3UTR GCA 90 bp CAGACAAATGAGCATGGCCGTGTTCCTACAAAGCTGGCTACAAAGTCAGCTGCAGGACCAGCTCAGCAATaGCCTGGTCGATGTACTTGT +
Preference number: 4 (lower is better)
Translates to: QTNEHGRVPTKLATKSAAGPAQQ*PGRCTC
Trigger: ACAAGTACATCGACCAGGGCATTGCTGAGCTGGTCC...TGCAGCTGACTTTGTAGCCAGCTTTGTAGGAACACGGCCATGCTCATTTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR GCA 90 bp CCGCCAGAATCTTCCCAACCTCATGAATCTCATCGCCACCATCTTTGTCTTTGCGGACCAGCTCAGCAATaGCCTGGTCGATGTACTTGT +
Preference number: 4 (lower is better)
Translates to: PPESSQPHESHRHHLCLCGPAQQ*PGRCTC
Trigger: ACAAGTACATCGACCAGGGCATTGCTGAGCTGGTCC...GCAAAGACAAAGATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR GCA 90 bp GAGGTGATGGTGCCAGATACAGCTGTACCCTTGGAGATGGAGCAGTTAGGTAAGCCCCACTCTGTGGGGTaGACTGTCATCATATTGTGT +
Preference number: 4 (lower is better)
Translates to: EVMVPDTAVPLEMEQLGKPHSVG*TVIILC
Trigger: ACACAATATGATGACAGTGCACCCCACAGAGTGGGG...CTTACCTAACTGCTCCATCTCCAAGGGTACAGCTGTATCTGGCACCATCACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR GCA 90 bp TTCTACCGCCAGAATCTTCCCAACCTCATGAATCTCATCGCCACCATCTTTGTCTCAGAATGCCTTGTGTaGAGTCCCCCACTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: FYRQNLPNLMNLIATIFVSECLV*SPPLCG
Trigger: CCCACAGAGTGGGGGACTGCACACAAGGCATTCTGA...GACAAAGATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR GCA 90 bp ATCGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGGCACCATCTTTGTCTTTaGAGTGGTCATCTATTTCCA +
Preference number: 4 (lower is better)
Translates to: IALFHLLATRTDKVRALRHHLCL*SGHLFP
Trigger: TGGAAATAGATGACCACTGCAAAGACAAAGATGGTG...CCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR GCA 90 bp CCGCCAGAATCTTCCCAACCTCATGAATCTCATCGCCACCATCTTTGTCTTTGCTCGCACTTTTCCATCTaGTGGCCACACGCACAGACA +
Preference number: 4 (lower is better)
Translates to: PPESSQPHESHRHHLCLCSHFSI*WPHAQT
Trigger: TGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGA...GCAAAGACAAAGATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR GCA 90 bp CCGAGCCCTTCGGGAGGCGTTCTACCGCCAGAATCTTCCCAACCTCATGAATCTATATGTCTCCTCCTCTaGCAACAGGAATGGAATTTG +
Preference number: 4 (lower is better)
Translates to: PSPSGGVLPPESSQPHESICLLL*QQEWNL
Trigger: CAAATTCCATTCCTGTTGGCAGAGGAGGAGACATAT...AGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAACGCCTCCCGAAGGGCTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CCA 90 bp GGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCTTATTCGCAGCCCAATaGCCCTGCGGAAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GMEFEGAIIALFHLLATRLFAAQ*PCGSSP
Trigger: TGGAGAACTTCCGCAGGGCCATTGGGCTGCGAATAA...GCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR CCA 90 bp CTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCAGTCCTATGATCACATaGCTAATGGTTTTGCCATAT +
Preference number: 4 (lower is better)
Translates to: LDPGQAHLGSLLLLKTSASPMIT*LMVLPY
Trigger: ATATGGCAAAACCATTAGCCATGTGATCATAGGACT...GGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR CCA 90 bp ACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCCAGAATCTTCCAGTCCTATGATCACATaGCTAATGGTTTTGCCATAT +
Preference number: 4 (lower is better)
Translates to: THRQGPSPSGGVLPPESSSPMIT*LMVLPY
Trigger: ATATGGCAAAACCATTAGCCATGTGATCATAGGACT...GGAAGATTCTGGCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR CCA 90 bp AGCCCTTCGGGAGGCGTTCTACCGCCAGAATCTTCCCAACCTCATGAATCTCATCAAGGTCGAATTCTGTaGCATAGGTATCACACCTGC +
Preference number: 4 (lower is better)
Translates to: SPSGGVLPPESSQPHESHQGRIL*HRYHTC
Trigger: GCAGGTGTGATACCTATGCCACAGAATTCGACCTTG...ATGAGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAACGCCTCCCGAAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000643535.1
ENST00000646581.1
CDS-3UTR CCA 90 bp GACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATCAACAAGAAGGGAAACTaGGTACAAGATACATGGGAA +
Preference number: 4 (lower is better)
Translates to: DPGQAHLGSLLLLKTSAINKKGN*VQDTWE
Trigger: TTCCCATGTATCTTGTACCCAGTTTCCCTTCTTGTT...GATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR CCA 90 bp GGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATAACAAGAAGGGAAACTaGGTACAAGATACATGGGAA +
Preference number: 4 (lower is better)
Translates to: GPRPGTPGESLTAENLSHNKKGN*VQDTWE
Trigger: TTCCCATGTATCTTGTACCCAGTTTCCCTTCTTGTT...ATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR CCA 90 bp AAGAAGGCTAGAAGCAAATTGAGTTGCCTGTTCGTTCCTTCATATATGTCTCCTTGCTTCAGGTCACGCTaGTCGACTGCCCCGGGCACG +
Preference number: 4 (lower is better)
Translates to: KKARSKLSCLFVPSYMSPCFRSR*STAPGT
Trigger: CGTGCCCGGGGCAGTCGACCAGCGTGACCTGAAGCA...AGGAGACATATATGAAGGAACGAACAGGCAACTCAATTTGCTTCTAGCCTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR CCA 90 bp CAGAATCTTCCCAACCTCATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTGGCATCACGCTCGATCTaGGCTTCTCGTGCTTCTCGG +
Preference number: 4 (lower is better)
Translates to: QNLPNLMNLIATIFVFAVASRSI*ASRASR
Trigger: CCGAGAAGCACGAGAAGCCCAGATCGAGCGTGATGC...CACTGCAAAGACAAAGATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR CCA 90 bp GGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCGAGGTTTCCAGATGAGCTaGACAAGCATGTTCATTGAG +
Preference number: 4 (lower is better)
Translates to: GAIIALFHLLATRTDKVRGFQMS*TSMFIE
Trigger: CTCAATGAACATGCTTGTCCAGCTCATCTGGAAACC...TCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
3UTR CAA 72 bp GAGTTTCCATGGTCTGGATTTAAGTTTCAGAATGCCTaGTGTGCAGTCCCCCACTCTGTGGGGTGCACTGTC +
Preference number: 4 (lower is better)
Translates to: EFPWSGFKFQNA*CAVPHSVGCTV
Trigger: GACAGTGCACCCCACAGAGTGGGGGACTGCACACAAGGCATTCTGAAACTTAAATCCAGACCATGGAAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
CDS-3UTR TCA 90 bp GACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATCAGGTCACATCTTGGATaGTTTCTTTCTTTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: DPGQAHLGSLLLLKTSAIRSHLG*FLSFCA
Trigger: TGCACAAAAAGAAAGAAATCATCCAAGATGTGACCT...GATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR TCA 90 bp AGGCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAAGGTCACATCTTGGATaGTTTCTTTCTTTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: RLDPGQAHLGSLLLLKTSRSHLG*FLSFCA
Trigger: TGCACAAAAAGAAAGAAATCATCCAAGATGTGACCT...TGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR TCA 90 bp GGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATAGGTCACATCTTGGATaGTTTCTTTCTTTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: GPRPGTPGESLTAENLSHRSHLG*FLSFCA
Trigger: TGCACAAAAAGAAAGAAATCATCCAAGATGTGACCT...ATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR TCA 90 bp GCCACAGCACTCTTCAGTCTGCACAGTCCTCAGTACAACTACTCATCTCTTCCACAGACAACAGACAAATaGGCATGGCCGTGTTCCTAC +
Preference number: 4 (lower is better)
Translates to: ATALFSLHSPQYNYSSLPQTTDK*AWPCSY
Trigger: GTAGGAACACGGCCATGCTCATTTGTCTGTTGTCTG...TGGAAGAGATGAGTAGTTGTACTGAGGACTGTGCAGACTGAAGAGTGCTGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR GCA 90 bp GAGTTGCCTGTTCGTTCCTTCATATATGTCTCCTCCTCTGCCAACAGGAATGGAAGTTCCAGGAGGTCCTaGCAACAAGACAGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: ELPVRSFIYVSSSANRNGSSRRS*QQDSSS
Trigger: GGAAGAGCTGTCTTGTTGGCAGGACCTCCTGGAACT...TCCATTCCTGTTGGCAGAGGAGGAGACATATATGAAGGAACGAACAGGCAACTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR GCA 90 bp ATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACAGGACCAGCTCAGCAATaGCCTGGTCGATGTACTTGT +
Preference number: 4 (lower is better)
Translates to: MEFEGAIIALFHLLATRTGPAQQ*PGRCTC
Trigger: ACAAGTACATCGACCAGGGCATTGCTGAGCTGGTCC...TGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR GCA 90 bp AGTCTGCACAGTCCTCAGTACAACTACTCATCTCTTCCATCGTCACTCAGAAGCGGACCAGCTCAGCAATaGCCTGGTCGATGTACTTGT +
Preference number: 4 (lower is better)
Translates to: SLHSPQYNYSSLPSSLRSGPAQQ*PGRCTC
Trigger: ACAAGTACATCGACCAGGGCATTGCTGAGCTGGTCC...GCTTCTGAGTGACGATGGAAGAGATGAGTAGTTGTACTGAGGACTGTGCAGACT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR GCA 90 bp GAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCAGTTGCCTCGGTTGGATaGAAAGATGACGATGGGAGC +
Preference number: 4 (lower is better)
Translates to: EWNLKVLSSHFSICWPHAVASVG*KDDDGS
Trigger: GCTCCCATCGTCATCTTTGCATCCAACCGAGGCAAC...TGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR GCA 90 bp GAATCTTCCCAACCTCATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTGGTTCAGTGTGGTCTTGGTaGCAATCTCCCCCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: ESSQPHESHRHHLCLCSGSVWSW*QSPPGG
Trigger: ACCACCTGGGGGAGATTGGCACCAAGACCACACTGA...ACCACTGCAAAGACAAAGATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR GCA 90 bp GCGTTCTACCGCCAGAATCTTCCCAACCTCATGAATCTCATCGCCACCATCTTTCCCCACTCTGTGGGGTaGACTGTCATCATATTGTGT +
Preference number: 4 (lower is better)
Translates to: AFYRQNLPNLMNLIATIFPHSVG*TVIILC
Trigger: ACACAATATGATGACAGTGCACCCCACAGAGTGGGG...AAAGATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAACGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR GCA 90 bp CTGCCAACAGGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGTCAGAATGCCTTGTGTaGAGTCCCCCACTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: LPTGMEFEGAIIALFHLLSECLV*SPPLCG
Trigger: CCCACAGAGTGGGGGACTGCACACAAGGCATTCTGA...CAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCATTCCTGTTGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR GCA 90 bp CAACAGGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCATCAGAATGCCTTGTGTaGAGTCCCCCACTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: QQEWNLKVLSSHFSICWPSECLV*SPPLCG
Trigger: CCCACAGAGTGGGGGACTGCACACAAGGCATTCTGA...TGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCATTCCTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR GCA 90 bp CTTCCCAACCTCATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTGGTCATCTCGCACTTTTCCATCTaGTGGCCACACGCACAGACA +
Preference number: 4 (lower is better)
Translates to: LPNLMNLIATIFVFAVVISHFSI*WPHAQT
Trigger: TGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGA...GATGACCACTGCAAAGACAAAGATGGTGGCGATGAGATTCATGAGGTTGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
CDS-3UTR GCA 90 bp AATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACAGACATCGCACTTTTCCATCTaGTGGCCACACGCACAGACA +
Preference number: 4 (lower is better)
Translates to: NLKVLSSHFSICWPHAQTSHFSI*WPHAQT
Trigger: TGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGA...TGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR GCA 90 bp CAGCACTCTTCAGTCTGCACAGTCCTCAGTACAACTACTCATCTCTTCCATCGTCCAGGTGACCTTAGATaGTGCCACAGCACTCTTCAG +
Preference number: 4 (lower is better)
Translates to: QHSSVCTVLSTTTHLFHRPGDLR*CHSTLQ
Trigger: CTGAAGAGTGCTGTGGCAGCATCTAAGGTCACCTGG...ACGATGGAAGAGATGAGTAGTTGTACTGAGGACTGTGCAGACTGAAGAGTGCTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR CCA 90 bp CTTCCCAACCTCATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTGGTCATCTTCACTCCCCACCATTaGGCAGAAGGGGACCTTACT +
Preference number: 4 (lower is better)
Translates to: LPNLMNLIATIFVFAVVIFTPHH*AEGDLT
Trigger: AGTAAGGTCCCCTTCTGCCCAATGGTGGGGAGTGAA...GATGACCACTGCAAAGACAAAGATGGTGGCGATGAGATTCATGAGGTTGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR CCA 90 bp GAGTTGCCTGTTCGTTCCTTCATATATGTCTCCTCCTCTGCCAACAGGAATGGATTATTCGCAGCCCAATaGCCCTGCGGAAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: ELPVRSFIYVSSSANRNGLFAAQ*PCGSSP
Trigger: TGGAGAACTTCCGCAGGGCCATTGGGCTGCGAATAA...TCCATTCCTGTTGGCAGAGGAGGAGACATATATGAAGGAACGAACAGGCAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR CCA 90 bp GACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATCAGTCCTATGATCACATaGCTAATGGTTTTGCCATAT +
Preference number: 4 (lower is better)
Translates to: DPGQAHLGSLLLLKTSAISPMIT*LMVLPY
Trigger: ATATGGCAAAACCATTAGCCATGTGATCATAGGACT...GATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR CCA 90 bp AGGCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAAACTTTCAAAAATGCTaGGGTCCAGTTTCAACTGTT +
Preference number: 4 (lower is better)
Translates to: RLDPGQAHLGSLLLLKTSNFQKC*GPVSTV
Trigger: AACAGTTGAAACTGGACCCCAGCATTTTTGAAAGTT...TGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR CCA 90 bp CCGCCAGAATCTTCCCAACCTCATGAATCTCATCGCCACCATCTTTGTCTTTGCAGCTCAGCAATGCCCTaGTCGATGTACTTGTTCACC +
Preference number: 4 (lower is better)
Translates to: PPESSQPHESHRHHLCLCSSAMP*SMYLFT
Trigger: GGTGAACAAGTACATCGACCAGGGCATTGCTGAGCT...GCAAAGACAAAGATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CCA 90 bp CGCCACCATCTTTGTCTTTGCAGTGGTCATCTATTTCCAGGTGTGTCCAGATCCAGCTCAGCAATGCCCTaGTCGATGTACTTGTTCACC +
Preference number: 4 (lower is better)
Translates to: RHHLCLCSGHLFPGVSRSSSAMP*SMYLFT
Trigger: GGTGAACAAGTACATCGACCAGGGCATTGCTGAGCT...GGATCTGGACACACCTGGAAATAGATGACCACTGCAAAGACAAAGATGGTGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CCA 90 bp GAGGCGTTCTACCGCCAGAATCTTCCCAACCTCATGAATCTCATCGCCACCATCCCCAGGGAGTTTCCATaGTCTGGATTTAAGTTTCAG +
Preference number: 4 (lower is better)
Translates to: EAFYRQNLPNLMNLIATIPREFP*SGFKFQ
Trigger: CTGAAACTTAAATCCAGACCATGGAAACTCCCTGGG...GATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAACGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CCA 90 bp GGAGGCGTTCTACCGCCAGAATCTTCCCAACCTCATGAATCTCATCGCCACCATCCCAGGGAGTTTCCATaGTCTGGATTTAAGTTTCAG +
Preference number: 4 (lower is better)
Translates to: GGVLPPESSQPHESHRHHPREFP*SGFKFQ
Trigger: CTGAAACTTAAATCCAGACCATGGAAACTCCCTGGG...ATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAACGCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CCA 90 bp CAGTCCCCCACTCTGTGGGGTGCACTGTCATCATATTGTGTTGAAACGATGAGAATGTTCATTGAGTCATaGGACCTGCCAGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: QSPTLWGALSSYCVETMRMFIES*DLPGCG
Trigger: ACCACAGCCTGGCAGGTCCCATGACTCAATGAACAT...TCTCATCGTTTCAACACAATATGATGACAGTGCACCCCACAGAGTGGGGGACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR TCA 90 bp AAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCGCACCTCTGTCTTCTTaGTCTCAGTTGAGTAAACTT +
Preference number: 4 (lower is better)
Translates to: KVLSSHFSICWPHAQTRSAPLSS*SQLSKL
Trigger: AAGTTTACTCAACTGAGATCAAGAAGACAGAGGTGC...GGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR TCA 90 bp TCTCATCGCCACCATCTTTGTCTTTGCAGTGGTCATCTATTTCCAGGTGTGTCCCAGCAGGTTTCCAGATaGGCTGGACAAGCATGTTCA +
Preference number: 4 (lower is better)
Translates to: SHRHHLCLCSGHLFPGVSQQVSR*AGQACS
Trigger: TGAACATGCTTGTCCAGCTCATCTGGAAACCTGCTG...GGACACACCTGGAAATAGATGACCACTGCAAAGACAAAGATGGTGGCGATGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
CDS-3UTR TCA 90 bp GAGGCGTTCTACCGCCAGAATCTTCCCAACCTCATGAATCTCATCGCCACCATCAACAGGAATGGAATTTaGAGGTGCTATCATCGCACT +
Preference number: 4 (lower is better)
Translates to: EAFYRQNLPNLMNLIATINRNGI*RCYHRT
Trigger: AGTGCGATGATAGCACCTTCAAATTCCATTCCTGTT...GATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAACGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR GCA 90 bp CTGCCAACAGGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGCCAGGTGACCTTAGATaGTGCCACAGCACTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LPTGMEFEGAIIALFHLLPGDLR*CHSTLQ
Trigger: CTGAAGAGTGCTGTGGCAGCATCTAAGGTCACCTGG...CAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCATTCCTGTTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR CCA 90 bp CGAGCCCTTCGGGAGGCGTTCTACCGCCAGAATCTTCCCAACCTCATGAATCTCAACTTTCAAAAATGCTaGGGTCCAGTTTCAACTGTT +
Preference number: 4 (lower is better)
Translates to: RALREAFYRQNLPNLMNLNFQKC*GPVSTV
Trigger: AACAGTTGAAACTGGACCCCAGCATTTTTGAAAGTT...GAGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAACGCCTCCCGAAGGGCTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR CCA 90 bp TGTGTGCAGTCCCCCACTCTGTGGGGTGCACTGTCATCATATTGTGTTGAAACGTCACGGCCCCACTGTTaGCTTCAATGTAAATCACAT +
Preference number: 4 (lower is better)
Translates to: CVQSPTLWGALSSYCVETSRPHC*LQCKSH
Trigger: ATGTGATTTACATTGAAGCCAACAGTGGGGCCGTGA...CGTTTCAACACAATATGATGACAGTGCACCCCACAGAGTGGGGGACTGCACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR CCA 90 bp TCAGAATGCCTTGTGTGCAGTCCCCCACTCTGTGGGGTGCACTGTCATCATATTCTGTTTCATTTCCTGTaGAGTATACAGCATGGTCCG +
Preference number: 4 (lower is better)
Translates to: SECLVCSPPLCGVHCHHILFHFL*SIQHGP
Trigger: CGGACCATGCTGTATACTCCACAGGAAATGAAACAG...AATATGATGACAGTGCACCCCACAGAGTGGGGGACTGCACACAAGGCATTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CCA 90 bp AAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCGTTGAAACGATGAGATaGTATTTGAAGGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: KVLSSHFSICWPHAQTRSVETMR*YLKAAG
Trigger: ACCTGCTGCCTTCAAATACCATCTCATCGTTTCAAC...GGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CCA 90 bp CAGAATCTTCCCAACCTCATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTGCACTTTTCCATCTGCTaGCCACACGCACAGACAAGG +
Preference number: 4 (lower is better)
Translates to: QNLPNLMNLIATIFVFAVHFSIC*PHAQTR
Trigger: CCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTG...CACTGCAAAGACAAAGATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CCA 90 bp GAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCTCTGCCAACAGGAATaGAATTTGAAGGTGCTATCA +
Preference number: 4 (lower is better)
Translates to: EGAIIALFHLLATRTDKVLCQQE*NLKVLS
Trigger: TGATAGCACCTTCAAATTCCATTCCTGTTGGCAGAG...GACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CCA 90 bp GAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCATGTTCATTGAGTCATaGGACCTGATGACACAGTTG +
Preference number: 4 (lower is better)
Translates to: EGAIIALFHLLATRTDKVMFIES*DLMTQL
Trigger: CAACTGTGTCATCAGGTCCCATGACTCAATGAACAT...GACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472125.5
ENST00000643535.1
CDS-3UTR TCA 90 bp GGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCGAAGGTCACATCTTGGATaGTTTCTTTCTTTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: GAIIALFHLLATRTDKVRRSHLG*FLSFCA
Trigger: TGCACAAAAAGAAAGAAATCATCCAAGATGTGACCT...TCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000643535.1
ENST00000646581.1
CDS-3UTR TCA 90 bp CTATTTCCAGGTGTGTCCAGATCCAACCCCAGGGAGTTTCCATGGTCTGGATTTGACAAGCATGTTCATTaGGTCATGGGACCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: LFPGVSRSNPREFPWSGFDKHVH*VMGPVS
Trigger: TGAAACAGGTCCCATGACTCAATGAACATGCTTGTC...AAATCCAGACCATGGAAACTCCCTGGGGTTGGATCTGGACACACCTGGAAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR TCA 90 bp CTGCCAACAGGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGCAGCAGGTTTCCAGATaGGCTGGACAAGCATGTTCA +
Preference number: 4 (lower is better)
Translates to: LPTGMEFEGAIIALFHLLQQVSR*AGQACS
Trigger: TGAACATGCTTGTCCAGCTCATCTGGAAACCTGCTG...CAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCATTCCTGTTGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR TCA 90 bp CAGAATCTTCCCAACCTCATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTGCAGCAGGTTTCCAGATaGGCTGGACAAGCATGTTCA +
Preference number: 4 (lower is better)
Translates to: QNLPNLMNLIATIFVFAVQQVSR*AGQACS
Trigger: TGAACATGCTTGTCCAGCTCATCTGGAAACCTGCTG...CACTGCAAAGACAAAGATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR TCA 90 bp GAAACGATGAGATGGTATTTGAAGGCAGCAGGTTTCCAGATGAGCTGGACAAGCATCTTCCCAACCTCATaGATCTCATCGCCACCATCT +
Preference number: 4 (lower is better)
Translates to: ETMRWYLKAAGFQMSWTSIFPTS*ISSPPS
Trigger: AGATGGTGGCGATGAGATTCATGAGGTTGGGAAGAT...GCTTGTCCAGCTCATCTGGAAACCTGCTGCCTTCAAATACCATCTCATCGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
CDS-3UTR TCA 90 bp GCGTTCTACCGCCAGAATCTTCCCAACCTCATGAATCTCATCGCCACCATCTTTAGGCTAGAAGCAAATTaGGTTGCCTGTTCGTTCCTT +
Preference number: 4 (lower is better)
Translates to: AFYRQNLPNLMNLIATIFRLEAN*VACSFL
Trigger: AAGGAACGAACAGGCAACTCAATTTGCTTCTAGCCT...AAAGATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAACGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR GCA 90 bp AAGCAAATTGAGTTGCCTGTTCGTTCCTTCATATATGTCTCCTCCTCTGCCAACGGACCAGCTCAGCAATaGCCTGGTCGATGTACTTGT +
Preference number: 4 (lower is better)
Translates to: KQIELPVRSFIYVSSSANGPAQQ*PGRCTC
Trigger: ACAAGTACATCGACCAGGGCATTGCTGAGCTGGTCC...GTTGGCAGAGGAGGAGACATATATGAAGGAACGAACAGGCAACTCAATTTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR GCA 90 bp AGAAGCAAATTGAGTTGCCTGTTCGTTCCTTCATATATGTCTCCTCCTCTGCCAGTTGCCTCGGTTGGATaGAAAGATGACGATGGGAGC +
Preference number: 4 (lower is better)
Translates to: RSKLSCLFVPSYMSPPLPVASVG*KDDDGS
Trigger: GCTCCCATCGTCATCTTTGCATCCAACCGAGGCAAC...TGGCAGAGGAGGAGACATATATGAAGGAACGAACAGGCAACTCAATTTGCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR GCA 90 bp TTGAGTTGCCTGTTCGTTCCTTCATATATGTCTCCTCCTCTGCCAACAGGAATGCCCCACTCTGTGGGGTaGACTGTCATCATATTGTGT +
Preference number: 4 (lower is better)
Translates to: LSCLFVPSYMSPPLPTGMPHSVG*TVIILC
Trigger: ACACAATATGATGACAGTGCACCCCACAGAGTGGGG...CATTCCTGTTGGCAGAGGAGGAGACATATATGAAGGAACGAACAGGCAACTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR GCA 90 bp AAGCAAATTGAGTTGCCTGTTCGTTCCTTCATATATGTCTCCTCCTCTGCCAACTCGCACTTTTCCATCTaGTGGCCACACGCACAGACA +
Preference number: 4 (lower is better)
Translates to: KQIELPVRSFIYVSSSANSHFSI*WPHAQT
Trigger: TGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGA...GTTGGCAGAGGAGGAGACATATATGAAGGAACGAACAGGCAACTCAATTTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CCA 90 bp ACCCCAGGGAGTTTCCATGGTCTGGATTTAAGTTTCAGAATGCCTTGTGTGCAGCAAGGTCGAATTCTGTaGCATAGGTATCACACCTGC +
Preference number: 4 (lower is better)
Translates to: TPGSFHGLDLSFRMPCVQQGRIL*HRYHTC
Trigger: GCAGGTGTGATACCTATGCCACAGAATTCGACCTTG...CTGCACACAAGGCATTCTGAAACTTAAATCCAGACCATGGAAACTCCCTGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR CCA 90 bp TTTGCAGTGGTCATCTATTTCCAGGTGTGTCCAGATCCAACCCCAGGGAGTTTCGGTTTCCAGATGAGCTaGACAAGCATGTTCATTGAG +
Preference number: 4 (lower is better)
Translates to: FAVVIYFQVCPDPTPGSFGFQMS*TSMFIE
Trigger: CTCAATGAACATGCTTGTCCAGCTCATCTGGAAACC...GAAACTCCCTGGGGTTGGATCTGGACACACCTGGAAATAGATGACCACTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CCA 90 bp AGACAAATGAGCATGGCCGTGTTCCTACAAAGCTGGCTACAAAGTCAGCTGCAGCCCAGGGAGTTTCCATaGTCTGGATTTAAGTTTCAG +
Preference number: 4 (lower is better)
Translates to: RQMSMAVFLQSWLQSQLQPREFP*SGFKFQ
Trigger: CTGAAACTTAAATCCAGACCATGGAAACTCCCTGGG...CTGCAGCTGACTTTGTAGCCAGCTTTGTAGGAACACGGCCATGCTCATTTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR CCA 90 bp CAACCTCATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTGGTCATCTATTTGGCCTTACCTCAGTGTaGTCTTGGTGCCAATCTCCC +
Preference number: 4 (lower is better)
Translates to: QPHESHRHHLCLCSGHLFGLTSV*SWCQSP
Trigger: GGGAGATTGGCACCAAGACCACACTGAGGTAAGGCC...AAATAGATGACCACTGCAAAGACAAAGATGGTGGCGATGAGATTCATGAGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR TCA 90 bp CTCATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTGGTCATCTATTTCCAGCAGCAGGTTTCCAGATaGGCTGGACAAGCATGTTCA +
Preference number: 4 (lower is better)
Translates to: LMNLIATIFVFAVVIYFQQQVSR*AGQACS
Trigger: TGAACATGCTTGTCCAGCTCATCTGGAAACCTGCTG...CTGGAAATAGATGACCACTGCAAAGACAAAGATGGTGGCGATGAGATTCATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
CDS-3UTR TCA 90 bp GAATCTCATCGCCACCATCTTTGTCTTTGCAGTGGTCATCTATTTCCAGGTGTGATCTTCCCAACCTCATaGATCTCATCGCCACCATCT +
Preference number: 4 (lower is better)
Translates to: ESHRHHLCLCSGHLFPGVIFPTS*ISSPPS
Trigger: AGATGGTGGCGATGAGATTCATGAGGTTGGGAAGAT...CACACCTGGAAATAGATGACCACTGCAAAGACAAAGATGGTGGCGATGAGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
CDS-3UTR TCA 90 bp GGGAGTTTCCATGGTCTGGATTTAAGTTTCAGAATGCCTTGTGTGCAGTCCCCCAACAGGAATGGAATTTaGAGGTGCTATCATCGCACT +
Preference number: 4 (lower is better)
Translates to: GSFHGLDLSFRMPCVQSPNRNGI*RCYHRT
Trigger: AGTGCGATGATAGCACCTTCAAATTCCATTCCTGTT...GGGGGACTGCACACAAGGCATTCTGAAACTTAAATCCAGACCATGGAAACTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
CDS-3UTR TCA 90 bp TTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGAACAGGAATGGAATTTaGAGGTGCTATCATCGCACT +
Preference number: 4 (lower is better)
Translates to: FEGAIIALFHLLATRTDKNRNGI*RCYHRT
Trigger: AGTGCGATGATAGCACCTTCAAATTCCATTCCTGTT...CTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR TCA 90 bp CTCATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTGGTCATCTATTTCCAGCAGACAACAGACAAATaGGCATGGCCGTGTTCCTAC +
Preference number: 4 (lower is better)
Translates to: LMNLIATIFVFAVVIYFQQTTDK*AWPCSY
Trigger: GTAGGAACACGGCCATGCTCATTTGTCTGTTGTCTG...CTGGAAATAGATGACCACTGCAAAGACAAAGATGGTGGCGATGAGATTCATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR GCA 90 bp TGCCAACAGGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGGCCACATCCAAGTCATaGAAGGTCACATCTTGGATG +
Preference number: 4 (lower is better)
Translates to: CQQEWNLKVLSSHFSICWATSKS*KVTSWM
Trigger: CATCCAAGATGTGACCTTGCATGACTTGGATGTGGC...CCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCATTCCTGTTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000643535.1
ENST00000646581.1
CDS-3UTR GCA 90 bp TATTGTGTTGAAACGATGAGATGGTATTTGAAGGCAGCAGGTTTCCAGATGAGCGTTGCCTCGGTTGGATaGAAAGATGACGATGGGAGC +
Preference number: 4 (lower is better)
Translates to: YCVETMRWYLKAAGFQMSVASVG*KDDDGS
Trigger: GCTCCCATCGTCATCTTTGCATCCAACCGAGGCAAC...GCTCATCTGGAAACCTGCTGCCTTCAAATACCATCTCATCGTTTCAACACAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
CDS-3UTR GCA 90 bp ATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTGGTCATCTATTTCCAGGTGCCCCACTCTGTGGGGTaGACTGTCATCATATTGTGT +
Preference number: 4 (lower is better)
Translates to: MNLIATIFVFAVVIYFQVPHSVG*TVIILC
Trigger: ACACAATATGATGACAGTGCACCCCACAGAGTGGGG...CACCTGGAAATAGATGACCACTGCAAAGACAAAGATGGTGGCGATGAGATTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
CDS-3UTR GCA 90 bp AAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCAGAAGCAAATTGAGTTaGCTGTTCGTTCCTTCATAT +
Preference number: 4 (lower is better)
Translates to: KVLSSHFSICWPHAQTRSRSKLS*LFVPSY
Trigger: ATATGAAGGAACGAACAGGCAACTCAATTTGCTTCT...GGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR GCA 90 bp GGAGGCGTTCTACCGCCAGAATCTTCCCAACCTCATGAATCTCATCGCCACCATAGAAGCAAATTGAGTTaGCTGTTCGTTCCTTCATAT +
Preference number: 4 (lower is better)
Translates to: GGVLPPESSQPHESHRHHRSKLS*LFVPSY
Trigger: ATATGAAGGAACGAACAGGCAACTCAATTTGCTTCT...ATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAACGCCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR GCA 90 bp TGCCAACAGGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCAGCACTCTTCAGTCTaGACAGTCCTCAGTACAACT +
Preference number: 4 (lower is better)
Translates to: CQQEWNLKVLSSHFSICWQHSSV*TVLSTT
Trigger: AGTTGTACTGAGGACTGTGCAGACTGAAGAGTGCTG...CCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCATTCCTGTTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR CCA 90 bp AAGCAAATTGAGTTGCCTGTTCGTTCCTTCATATATGTCTCCTCCTCTGCCAACTGCCATATCCTCCCATaGGATTCTCTGTCTCACACG +
Preference number: 4 (lower is better)
Translates to: KQIELPVRSFIYVSSSANCHILP*DSLSHT
Trigger: CGTGTGAGACAGAGAATCCCATGGGAGGATATGGCA...GTTGGCAGAGGAGGAGACATATATGAAGGAACGAACAGGCAACTCAATTTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR CCA 90 bp AATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACAGACATCACGGCCCCACTGTTaGCTTCAATGTAAATCACAT +
Preference number: 4 (lower is better)
Translates to: NLKVLSSHFSICWPHAQTSRPHC*LQCKSH
Trigger: ATGTGATTTACATTGAAGCCAACAGTGGGGCCGTGA...TGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000643535.1
ENST00000646581.1
CDS-3UTR CCA 90 bp AAGCAAATTGAGTTGCCTGTTCGTTCCTTCATATATGTCTCCTCCTCTGCCAACAGCTCAGCAATGCCCTaGTCGATGTACTTGTTCACC +
Preference number: 4 (lower is better)
Translates to: KQIELPVRSFIYVSSSANSSAMP*SMYLFT
Trigger: GGTGAACAAGTACATCGACCAGGGCATTGCTGAGCT...GTTGGCAGAGGAGGAGACATATATGAAGGAACGAACAGGCAACTCAATTTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CCA 90 bp CCACAGCACTCTTCAGTCTGCACAGTCCTCAGTACAACTACTCATCTCTTCCATGTGGAGTATACAGCATaGTCCGGATTATCATCACTC +
Preference number: 4 (lower is better)
Translates to: PQHSSVCTVLSTTTHLFHVEYTA*SGLSSL
Trigger: GAGTGATGATAATCCGGACCATGCTGTATACTCCAC...ATGGAAGAGATGAGTAGTTGTACTGAGGACTGTGCAGACTGAAGAGTGCTGTGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR CCA 90 bp ATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACAGTGGAGTATACAGCATaGTCCGGATTATCATCACTC +
Preference number: 4 (lower is better)
Translates to: MEFEGAIIALFHLLATRTVEYTA*SGLSSL
Trigger: GAGTGATGATAATCCGGACCATGCTGTATACTCCAC...TGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CCA 90 bp CACTCTTCAGTCTGCACAGTCCTCAGTACAACTACTCATCTCTTCCATCGTCACCTGTTTCATTTCCTGTaGAGTATACAGCATGGTCCG +
Preference number: 4 (lower is better)
Translates to: HSSVCTVLSTTTHLFHRHLFHFL*SIQHGP
Trigger: CGGACCATGCTGTATACTCCACAGGAAATGAAACAG...GTGACGATGGAAGAGATGAGTAGTTGTACTGAGGACTGTGCAGACTGAAGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR CCA 90 bp TGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACAGCTCTGCCAACAGGAATaGAATTTGAAGGTGCTATCA +
Preference number: 4 (lower is better)
Translates to: WNLKVLSSHFSICWPHAQLCQQE*NLKVLS
Trigger: TGATAGCACCTTCAAATTCCATTCCTGTTGGCAGAG...CTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CCA 90 bp CATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTGGTCATCTATTTCCAGGTATGTTCATTGAGTCATaGGACCTGCCAGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: HESHRHHLCLCSGHLFPGMFIES*DLPGCG
Trigger: ACCACAGCCTGGCAGGTCCCATGACTCAATGAACAT...ACCTGGAAATAGATGACCACTGCAAAGACAAAGATGGTGGCGATGAGATTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR TCA 90 bp TTCTACCGCCAGAATCTTCCCAACCTCATGAATCTCATCGCCACCATCTTTGTCGCACCTCTGTCTTCTTaGTCTCAGTTGAGTAAACTT +
Preference number: 4 (lower is better)
Translates to: FYRQNLPNLMNLIATIFVAPLSS*SQLSKL
Trigger: AAGTTTACTCAACTGAGATCAAGAAGACAGAGGTGC...GACAAAGATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR TCA 90 bp ATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACAACGGAGTTAGCTCTGTaGCTTCACCTTCATAAACTT +
Preference number: 4 (lower is better)
Translates to: MEFEGAIIALFHLLATRTTELAL*LHLHKL
Trigger: AAGTTTATGAAGGTGAAGTCACAGAGCTAACTCCGT...TGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR GCA 90 bp ATTGAGTTGCCTGTTCGTTCCTTCATATATGTCTCCTCCTCTGCCAACAGGAATGCCACATCCAAGTCATaGAAGGTCACATCTTGGATG +
Preference number: 4 (lower is better)
Translates to: IELPVRSFIYVSSSANRNATSKS*KVTSWM
Trigger: CATCCAAGATGTGACCTTGCATGACTTGGATGTGGC...ATTCCTGTTGGCAGAGGAGGAGACATATATGAAGGAACGAACAGGCAACTCAAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000643535.1
ENST00000646581.1
CDS-3UTR GCA 90 bp AAGAAGGCTAGAAGCAAATTGAGTTGCCTGTTCGTTCCTTCATATATGTCTCCTGTTGCCTCGGTTGGATaGAAAGATGACGATGGGAGC +
Preference number: 4 (lower is better)
Translates to: KKARSKLSCLFVPSYMSPVASVG*KDDDGS
Trigger: GCTCCCATCGTCATCTTTGCATCCAACCGAGGCAAC...AGGAGACATATATGAAGGAACGAACAGGCAACTCAATTTGCTTCTAGCCTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR GCA 90 bp TATTGTGTTGAAACGATGAGATGGTATTTGAAGGCAGCAGGTTTCCAGATGAGCCCCCACTCTGTGGGGTaGACTGTCATCATATTGTGT +
Preference number: 4 (lower is better)
Translates to: YCVETMRWYLKAAGFQMSPHSVG*TVIILC
Trigger: ACACAATATGATGACAGTGCACCCCACAGAGTGGGG...GCTCATCTGGAAACCTGCTGCCTTCAAATACCATCTCATCGTTTCAACACAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
CDS-3UTR GCA 90 bp GGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCCACCATCTTTGTCTTTaGAGTGGTCATCTATTTCCA +
Preference number: 4 (lower is better)
Translates to: GMEFEGAIIALFHLLATRHHLCL*SGHLFP
Trigger: TGGAAATAGATGACCACTGCAAAGACAAAGATGGTG...GCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR GCA 90 bp AATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACAGACAATATGTCTCCTCCTCTaGCAACAGGAATGGAATTTG +
Preference number: 4 (lower is better)
Translates to: NLKVLSSHFSICWPHAQTICLLL*QQEWNL
Trigger: CAAATTCCATTCCTGTTGGCAGAGGAGGAGACATAT...TGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR GCA 90 bp CAACCTCATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTGGTCATCTATTTGGTGACCTTAGATGCTaGCACAGCACTCTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: QPHESHRHHLCLCSGHLFGDLRC*HSTLQS
Trigger: AGACTGAAGAGTGCTGTGGCAGCATCTAAGGTCACC...AAATAGATGACCACTGCAAAGACAAAGATGGTGGCGATGAGATTCATGAGGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR CCA 90 bp CATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTGGTCATCTATTTCCAGGTCAAGGTCGAATTCTGTaGCATAGGTATCACACCTGC +
Preference number: 4 (lower is better)
Translates to: HESHRHHLCLCSGHLFPGQGRIL*HRYHTC
Trigger: GCAGGTGTGATACCTATGCCACAGAATTCGACCTTG...ACCTGGAAATAGATGACCACTGCAAAGACAAAGATGGTGGCGATGAGATTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR CCA 90 bp CTGCCAACAGGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGCCCAGAAAGTCCAAATaGCTTCACTTCTCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: LPTGMEFEGAIIALFHLLPRKSK*LHFSEG
Trigger: TCCTTCTGAGAAGTGAAGCCATTTGGACTTTCTGGG...CAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCATTCCTGTTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR CCA 90 bp GAATCTCATCGCCACCATCTTTGTCTTTGCAGTGGTCATCTATTTCCAGGTGTGGGTTTCCAGATGAGCTaGACAAGCATGTTCATTGAG +
Preference number: 4 (lower is better)
Translates to: ESHRHHLCLCSGHLFPGVGFQMS*TSMFIE
Trigger: CTCAATGAACATGCTTGTCCAGCTCATCTGGAAACC...CACACCTGGAAATAGATGACCACTGCAAAGACAAAGATGGTGGCGATGAGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CCA 90 bp CTGCCAACAGGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGGTTTCCAGATGAGCTaGACAAGCATGTTCATTGAG +
Preference number: 4 (lower is better)
Translates to: LPTGMEFEGAIIALFHLLGFQMS*TSMFIE
Trigger: CTCAATGAACATGCTTGTCCAGCTCATCTGGAAACC...CAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCATTCCTGTTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CCA 90 bp CGCCAGAATCTTCCCAACCTCATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTTGAAACGATGAGATaGTATTTGAAGGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: RQNLPNLMNLIATIFVFAVETMR*YLKAAG
Trigger: ACCTGCTGCCTTCAAATACCATCTCATCGTTTCAAC...TGCAAAGACAAAGATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CCA 90 bp TCTTTGTCTTTGCAGTGGTCATCTATTTCCAGGTGTGTCCAGATCCAACCCCAGGTTGAAACGATGAGATaGTATTTGAAGGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: SLSLQWSSISRCVQIQPQVETMR*YLKAAG
Trigger: ACCTGCTGCCTTCAAATACCATCTCATCGTTTCAAC...CTGGGGTTGGATCTGGACACACCTGGAAATAGATGACCACTGCAAAGACAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CCA 90 bp TTGAGTTGCCTGTTCGTTCCTTCATATATGTCTCCTCCTCTGCCAACAGGAATGCCCAGGGAGTTTCCATaGTCTGGATTTAAGTTTCAG +
Preference number: 4 (lower is better)
Translates to: LSCLFVPSYMSPPLPTGMPREFP*SGFKFQ
Trigger: CTGAAACTTAAATCCAGACCATGGAAACTCCCTGGG...CATTCCTGTTGGCAGAGGAGGAGACATATATGAAGGAACGAACAGGCAACTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CCA 90 bp GAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACTCTGCCAACAGGAATaGAATTTGAAGGTGCTATCA +
Preference number: 4 (lower is better)
Translates to: EWNLKVLSSHFSICWPHALCQQE*NLKVLS
Trigger: TGATAGCACCTTCAAATTCCATTCCTGTTGGCAGAG...TGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR TCA 90 bp GAATCTTCCCAACCTCATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTGGTCTCGAAGTTTGTCTGTaGTTTCTGTCTTCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: ESSQPHESHRHHLCLCSGLEVCL*FLSSLA
Trigger: AGCCAAAGAAGACAGAAATCACAGACAAACTTCGAG...ACCACTGCAAAGACAAAGATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000643535.1
ENST00000646581.1
CDS-3UTR TCA 90 bp TATTGTGTTGAAACGATGAGATGGTATTTGAAGGCAGCAGGTTTCCAGATGAGCATCTTCCCAACCTCATaGATCTCATCGCCACCATCT +
Preference number: 4 (lower is better)
Translates to: YCVETMRWYLKAAGFQMSIFPTS*ISSPPS
Trigger: AGATGGTGGCGATGAGATTCATGAGGTTGGGAAGAT...GCTCATCTGGAAACCTGCTGCCTTCAAATACCATCTCATCGTTTCAACACAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
CDS-3UTR TCA 90 bp CAACAGGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCAAACAGGAATGGAATTTaGAGGTGCTATCATCGCACT +
Preference number: 4 (lower is better)
Translates to: QQEWNLKVLSSHFSICWPNRNGI*RCYHRT
Trigger: AGTGCGATGATAGCACCTTCAAATTCCATTCCTGTT...TGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCATTCCTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR GCA 90 bp CTCTGCCAACAGGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCATATGTCTCCTCCTCTaGCAACAGGAATGGAATTTG +
Preference number: 4 (lower is better)
Translates to: LCQQEWNLKVLSSHFSICICLLL*QQEWNL
Trigger: CAAATTCCATTCCTGTTGGCAGAGGAGGAGACATAT...GCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCATTCCTGTTGGCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR GCA 90 bp TCTCCTCCTCTGCCAACAGGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCATATGTCTCCTCCTCTaGCAACAGGAATGGAATTTG +
Preference number: 4 (lower is better)
Translates to: SPPLPTGMEFEGAIIALFICLLL*QQEWNL
Trigger: CAAATTCCATTCCTGTTGGCAGAGGAGGAGACATAT...GAAAAGTGCGATGATAGCACCTTCAAATTCCATTCCTGTTGGCAGAGGAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR GCA 90 bp TTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGAGAAGCAAATTGAGTTaGCTGTTCGTTCCTTCATAT +
Preference number: 4 (lower is better)
Translates to: FEGAIIALFHLLATRTDKRSKLS*LFVPSY
Trigger: ATATGAAGGAACGAACAGGCAACTCAATTTGCTTCT...CTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CCA 90 bp AAGAAGGCTAGAAGCAAATTGAGTTGCCTGTTCGTTCCTTCATATATGTCTCCTTGCCATATCCTCCCATaGGATTCTCTGTCTCACACG +
Preference number: 4 (lower is better)
Translates to: KKARSKLSCLFVPSYMSPCHILP*DSLSHT
Trigger: CGTGTGAGACAGAGAATCCCATGGGAGGATATGGCA...AGGAGACATATATGAAGGAACGAACAGGCAACTCAATTTGCTTCTAGCCTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR CCA 90 bp AAATTGAGTTGCCTGTTCGTTCCTTCATATATGTCTCCTCCTCTGCCAACAGGATCACGGCCCCACTGTTaGCTTCAATGTAAATCACAT +
Preference number: 4 (lower is better)
Translates to: KLSCLFVPSYMSPPLPTGSRPHC*LQCKSH
Trigger: ATGTGATTTACATTGAAGCCAACAGTGGGGCCGTGA...TCCTGTTGGCAGAGGAGGAGACATATATGAAGGAACGAACAGGCAACTCAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000643535.1
ENST00000646581.1
CDS-3UTR CCA 90 bp ATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTGGTCATCTATTTCCAGGTGGTGGAGTATACAGCATaGTCCGGATTATCATCACTC +
Preference number: 4 (lower is better)
Translates to: MNLIATIFVFAVVIYFQVVEYTA*SGLSSL
Trigger: GAGTGATGATAATCCGGACCATGCTGTATACTCCAC...CACCTGGAAATAGATGACCACTGCAAAGACAAAGATGGTGGCGATGAGATTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CCA 90 bp ATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTGGTCATCTATTTCCAGGTGCTGTTTCATTTCCTGTaGAGTATACAGCATGGTCCG +
Preference number: 4 (lower is better)
Translates to: MNLIATIFVFAVVIYFQVLFHFL*SIQHGP
Trigger: CGGACCATGCTGTATACTCCACAGGAAATGAAACAG...CACCTGGAAATAGATGACCACTGCAAAGACAAAGATGGTGGCGATGAGATTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CCA 90 bp ATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTGGTCATCTATTTCCAGGTGGGTTTCCAGATGAGCTaGACAAGCATGTTCATTGAG +
Preference number: 4 (lower is better)
Translates to: MNLIATIFVFAVVIYFQVGFQMS*TSMFIE
Trigger: CTCAATGAACATGCTTGTCCAGCTCATCTGGAAACC...CACCTGGAAATAGATGACCACTGCAAAGACAAAGATGGTGGCGATGAGATTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CCA 90 bp TGCCAACAGGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGGTTGAAACGATGAGATaGTATTTGAAGGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: CQQEWNLKVLSSHFSICWVETMR*YLKAAG
Trigger: ACCTGCTGCCTTCAAATACCATCTCATCGTTTCAAC...CCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCATTCCTGTTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CCA 90 bp CAACAGGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACTCTGCCAACAGGAATaGAATTTGAAGGTGCTATCA +
Preference number: 4 (lower is better)
Translates to: QQEWNLKVLSSHFSICWPLCQQE*NLKVLS
Trigger: TGATAGCACCTTCAAATTCCATTCCTGTTGGCAGAG...TGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCATTCCTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR TCA 90 bp CAACCTCATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTGGTCATCTATTTAGGCTAGAAGCAAATTaGGTTGCCTGTTCGTTCCTT +
Preference number: 4 (lower is better)
Translates to: QPHESHRHHLCLCSGHLFRLEAN*VACSFL
Trigger: AAGGAACGAACAGGCAACTCAATTTGCTTCTAGCCT...AAATAGATGACCACTGCAAAGACAAAGATGGTGGCGATGAGATTCATGAGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
CDS-3UTR GCA 90 bp CAACAGGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACCATCTTTGTCTTTaGAGTGGTCATCTATTTCCA +
Preference number: 4 (lower is better)
Translates to: QQEWNLKVLSSHFSICWPHHLCL*SGHLFP
Trigger: TGGAAATAGATGACCACTGCAAAGACAAAGATGGTG...TGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCATTCCTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR GCA 90 bp CCAGAATCTTCCCAACCTCATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTCACCATCTTTGTCTTTaGAGTGGTCATCTATTTCCA +
Preference number: 4 (lower is better)
Translates to: PESSQPHESHRHHLCLCSHHLCL*SGHLFP
Trigger: TGGAAATAGATGACCACTGCAAAGACAAAGATGGTG...ACTGCAAAGACAAAGATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR GCA 90 bp TCGCCACCATCTTTGTCTTTGCAGTGGTCATCTATTTCCAGGTGTGTCCAGATCAGAAGCAAATTGAGTTaGCTGTTCGTTCCTTCATAT +
Preference number: 4 (lower is better)
Translates to: SPPSLSLQWSSISRCVQIRSKLS*LFVPSY
Trigger: ATATGAAGGAACGAACAGGCAACTCAATTTGCTTCT...GATCTGGACACACCTGGAAATAGATGACCACTGCAAAGACAAAGATGGTGGCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
CDS-3UTR GCA 90 bp GAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCAAGAAGCAAATTGAGTTaGCTGTTCGTTCCTTCATAT +
Preference number: 4 (lower is better)
Translates to: EWNLKVLSSHFSICWPHARSKLS*LFVPSY
Trigger: ATATGAAGGAACGAACAGGCAACTCAATTTGCTTCT...TGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CCA 90 bp CCTCATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTGGTCATCTATTTCCACTTCATAAACTTCCTTaGTCTCCTTTATTCGCAGCC +
Preference number: 4 (lower is better)
Translates to: PHESHRHHLCLCSGHLFPLHKLP*SPLFAA
Trigger: GGCTGCGAATAAAGGAGACCAAGGAAGTTTATGAAG...TGGAAATAGATGACCACTGCAAAGACAAAGATGGTGGCGATGAGATTCATGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR CCA 90 bp CTTCCCAACCTCATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTGGTCATCAGTCCTATGATCACATaGCTAATGGTTTTGCCATAT +
Preference number: 4 (lower is better)
Translates to: LPNLMNLIATIFVFAVVISPMIT*LMVLPY
Trigger: ATATGGCAAAACCATTAGCCATGTGATCATAGGACT...GATGACCACTGCAAAGACAAAGATGGTGGCGATGAGATTCATGAGGTTGGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR CCA 90 bp CCTCTGCCAACAGGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGATGTTCATTGAGTCATaGGACCTGTTTCATTTCCTG +
Preference number: 4 (lower is better)
Translates to: PLPTGMEFEGAIIALFHLMFIES*DLFHFL
Trigger: CAGGAAATGAAACAGGTCCCATGACTCAATGAACAT...CAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCATTCCTGTTGGCAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR TCA 90 bp CAACCTCATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTGGTCATCTATTTACGGAGTTAGCTCTGTaGCTTCACCTTCATAAACTT +
Preference number: 4 (lower is better)
Translates to: QPHESHRHHLCLCSGHLFTELAL*LHLHKL
Trigger: AAGTTTATGAAGGTGAAGTCACAGAGCTAACTCCGT...AAATAGATGACCACTGCAAAGACAAAGATGGTGGCGATGAGATTCATGAGGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR TCA 90 bp CCAGAATCTTCCCAACCTCATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTAGGTCACATCTTGGATaGTTTCTTTCTTTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: PESSQPHESHRHHLCLCSRSHLG*FLSFCA
Trigger: TGCACAAAAAGAAAGAAATCATCCAAGATGTGACCT...ACTGCAAAGACAAAGATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000643535.1
ENST00000646581.1
CDS-3UTR TCA 90 bp TCTCCTCCTCTGCCAACAGGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCAGGTCACATCTTGGATaGTTTCTTTCTTTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: SPPLPTGMEFEGAIIALFRSHLG*FLSFCA
Trigger: TGCACAAAAAGAAAGAAATCATCCAAGATGTGACCT...GAAAAGTGCGATGATAGCACCTTCAAATTCCATTCCTGTTGGCAGAGGAGGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000643535.1
ENST00000646581.1
CDS-3UTR TCA 90 bp GAATCTTCCCAACCTCATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTGGTAGGTCACATCTTGGATaGTTTCTTTCTTTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: ESSQPHESHRHHLCLCSGRSHLG*FLSFCA
Trigger: TGCACAAAAAGAAAGAAATCATCCAAGATGTGACCT...ACCACTGCAAAGACAAAGATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000643535.1
ENST00000646581.1
CDS-3UTR GCA 90 bp AAATTGAGTTGCCTGTTCGTTCCTTCATATATGTCTCCTCCTCTGCCAACAGGACACCATCTTTGTCTTTaGAGTGGTCATCTATTTCCA +
Preference number: 4 (lower is better)
Translates to: KLSCLFVPSYMSPPLPTGHHLCL*SGHLFP
Trigger: TGGAAATAGATGACCACTGCAAAGACAAAGATGGTG...TCCTGTTGGCAGAGGAGGAGACATATATGAAGGAACGAACAGGCAACTCAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR GCA 90 bp CAACAGGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCAAGAAGCAAATTGAGTTaGCTGTTCGTTCCTTCATAT +
Preference number: 4 (lower is better)
Translates to: QQEWNLKVLSSHFSICWPRSKLS*LFVPSY
Trigger: ATATGAAGGAACGAACAGGCAACTCAATTTGCTTCT...TGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCATTCCTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CCA 90 bp AACCCCAGGGAGTTTCCATGGTCTGGATTTAAGTTTCAGAATGCCTTGTGTGCAAACTTTCAAAAATGCTaGGGTCCAGTTTCAACTGTT +
Preference number: 4 (lower is better)
Translates to: NPREFPWSGFKFQNALCANFQKC*GPVSTV
Trigger: AACAGTTGAAACTGGACCCCAGCATTTTTGAAAGTT...TGCACACAAGGCATTCTGAAACTTAAATCCAGACCATGGAAACTCCCTGGGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR TCA 90 bp AAGAAGGCTAGAAGCAAATTGAGTTGCCTGTTCGTTCCTTCATATATGTCTCCTCTCGAAGTTTGTCTGTaGTTTCTGTCTTCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: KKARSKLSCLFVPSYMSPLEVCL*FLSSLA
Trigger: AGCCAAAGAAGACAGAAATCACAGACAAACTTCGAG...AGGAGACATATATGAAGGAACGAACAGGCAACTCAATTTGCTTCTAGCCTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000643535.1
ENST00000646581.1
CDS-3UTR GCA 90 bp AAGGCTAGAAGCAAATTGAGTTGCCTGTTCGTTCCTTCATATATGTCTCCTCCTCACCATCTTTGTCTTTaGAGTGGTCATCTATTTCCA +
Preference number: 4 (lower is better)
Translates to: KARSKLSCLFVPSYMSPPHHLCL*SGHLFP
Trigger: TGGAAATAGATGACCACTGCAAAGACAAAGATGGTG...AGGAGGAGACATATATGAAGGAACGAACAGGCAACTCAATTTGCTTCTAGCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS GCA 90 bp TCTCGTGCTTCTCGGTGCCGCTGCCCGCGCGCCTGCGGTCGTCTTTaGCCGAGTTCCAGGCAGCGCCCGAGGCCGAGCCCGAGCCCGGCG +
Preference number: 5 (lower is better)
Translates to: SRASRCRCPRACGRL*PSSRQRPRPSPSPA
Trigger: CGCCGGGCTCGGGCTCGGCCTCGGGCGCTGCCTGGAACTCGGGCAAAGACGACCGCAGGCGCGCGGGCAGCGGCACCGAGAAGCACGAGA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS GCA 90 bp AGTTCCAGGCAGCGCCCGAGGCCGAGCCCGAGCCCGGCGAGCCACTaGTTCAGGTCACGCTGGTCGACTGCCCCGGGCACGCCTCCCTCA +
Preference number: 5 (lower is better)
Translates to: SSRQRPRPSPSPASH*FRSRWSTAPGTPPS
Trigger: TGAGGGAGGCGTGCCCGGGGCAGTCGACCAGCGTGACCTGAAGCAGTGGCTCGCCGGGCTCGGGCTCGGCCTCGGGCGCTGCCTGGAACT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS GCA 90 bp CCGCAGAGCCGCGAGCGCGGCATCACGCTCGATCTGGGCTTCTCGTaGTTCTCGGTGCCGCTGCCCGCGCGCCTGCGGTCGTCTTTGCCC +
Preference number: 5 (lower is better)
Translates to: PQSRERGITLDLGFS*FSVPLPARLRSSLP
Trigger: GGGCAAAGACGACCGCAGGCGCGCGGGCAGCGGCACCGAGAAGCACGAGAAGCCCAGATCGAGCGTGATGCCGCGCTCGCGGCTCTGCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS CCA 90 bp CCGAGGCCGAGCCCGAGCCCGGCGAGCCACTGCTTCAGGTCACGCTaGTCGACTGCCCCGGGCACGCCTCCCTCATCCGGACCATCATCG +
Preference number: 5 (lower is better)
Translates to: PRPSPSPASHCFRSR*STAPGTPPSSGPSS
Trigger: CGATGATGGTCCGGATGAGGGAGGCGTGCCCGGGGCAGTCGACCAGCGTGACCTGAAGCAGTGGCTCGCCGGGCTCGGGCTCGGCCTCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS GCA 90 bp GAGCCCGAGCCCGGCGAGCCACTGCTTCAGGTCACGCTGGTCGACTaGCCCGGGCACGCCTCCCTCATCCGGACCATCATCGGCGGTGAG +
Preference number: 5 (lower is better)
Translates to: EPEPGEPLLQVTLVD*PGHASLIRTIIGGE
Trigger: CTCACCGCCGATGATGGTCCGGATGAGGGAGGCGTGCCCGGGGCAGTCGACCAGCGTGACCTGAAGCAGTGGCTCGCCGGGCTCGGGCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS GCA 90 bp TCGATCTGGGCTTCTCGTGCTTCTCGGTGCCGCTGCCCGCGCGCCTaGGGTCGTCTTTGCCCGAGTTCCAGGCAGCGCCCGAGGCCGAGC +
Preference number: 5 (lower is better)
Translates to: SIWASRASRCRCPRA*GRLCPSSRQRPRPS
Trigger: GCTCGGCCTCGGGCGCTGCCTGGAACTCGGGCAAAGACGACCGCAGGCGCGCGGGCAGCGGCACCGAGAAGCACGAGAAGCCCAGATCGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS GCA 90 bp GCGGCATCACGCTCGATCTGGGCTTCTCGTGCTTCTCGGTGCCGCTaGCCGCGCGCCTGCGGTCGTCTTTGCCCGAGTTCCAGGCAGCGC +
Preference number: 5 (lower is better)
Translates to: AASRSIWASRASRCR*PRACGRLCPSSRQR
Trigger: GCGCTGCCTGGAACTCGGGCAAAGACGACCGCAGGCGCGCGGGCAGCGGCACCGAGAAGCACGAGAAGCCCAGATCGAGCGTGATGCCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS GCA 90 bp GCGAGCGCGGCATCACGCTCGATCTGGGCTTCTCGTGCTTCTCGGTaGCGCTGCCCGCGCGCCTGCGGTCGTCTTTGCCCGAGTTCCAGG +
Preference number: 5 (lower is better)
Translates to: ASAASRSIWASRASR*RCPRACGRLCPSSR
Trigger: CCTGGAACTCGGGCAAAGACGACCGCAGGCGCGCGGGCAGCGGCACCGAGAAGCACGAGAAGCCCAGATCGAGCGTGATGCCGCGCTCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS GCA 90 bp GCCTCGCCTGTCAGCTCTCCAGGCTGGGACCCTGCGGGCAGGAGCTaGAGGGGGAGCCCAGTCTCTGATGATCGCGGTTGGGCTTGGGGG +
Preference number: 5 (lower is better)
Translates to: ASPVSSPGWDPAGRS*RGSPVSDDRGWAWG
Trigger: CCCCCAAGCCCAACCGCGATCATCAGAGACTGGGCTCCCCCTGCAGCTCCTGCCCGCAGGGTCCCAGCCTGGAGAGCTGACAGGCGAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS CCA 90 bp TTGACAAGCAGCCGCAGAGCCGCGAGCGCGGCATCACGCTCGATCTaGGCTTCTCGTGCTTCTCGGTGCCGCTGCCCGCGCGCCTGCGGT +
Preference number: 5 (lower is better)
Translates to: LTSSRRAASAASRSI*ASRASRCRCPRACG
Trigger: ACCGCAGGCGCGCGGGCAGCGGCACCGAGAAGCACGAGAAGCCCAGATCGAGCGTGATGCCGCGCTCGCGGCTCTGCGGCTGCTTGTCAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS TCA 90 bp TATGACGCCACATGCCTCTCGCGCGTTCTCCTGGCCCACAAGCCCTaGGGCCGCCTGCTTGGCCAAGCCGCTCTCGTCCAGCCCCAGCCC +
Preference number: 5 (lower is better)
Translates to: YDATCLSRVLLAHKP*GRLLGQAALVQPQP
Trigger: GGGCTGGGGCTGGACGAGAGCGGCTTGGCCAAGCAGGCGGCCTCAGGGCTTGTGGGCCAGGAGAACGCGCGAGAGGCATGTGGCGTCATA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS GCA 90 bp CATGCCTCTCGCGCGTTCTCCTGGCCCACAAGCCCTGAGGCCGCCTaGTTGGCCAAGCCGCTCTCGTCCAGCCCCAGCCCTTTCACGTGG +
Preference number: 5 (lower is better)
Translates to: HASRAFSWPTSPEAA*LAKPLSSSPSPFTW
Trigger: CCACGTGAAAGGGCTGGGGCTGGACGAGAGCGGCTTGGCCAAGCAGGCGGCCTCAGGGCTTGTGGGCCAGGAGAACGCGCGAGAGGCATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS CCA 90 bp CCTCTCGCGCGTTCTCCTGGCCCACAAGCCCTGAGGCCGCCTGCTTaGCCAAGCCGCTCTCGTCCAGCCCCAGCCCTTTCACGTGGCTGT +
Preference number: 5 (lower is better)
Translates to: PLARSPGPQALRPPA*PSRSRPAPALSRGC
Trigger: ACAGCCACGTGAAAGGGCTGGGGCTGGACGAGAGCGGCTTGGCCAAGCAGGCGGCCTCAGGGCTTGTGGGCCAGGAGAACGCGCGAGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS GCA 90 bp ATAAGAGAAACTGAGACCTGGGTTGGTGGGCAGGGAGCCAACGCCTaGCCAGCACTGCCGGCCCGGCACCCTCCAGGAGGCATGTGCGGC +
Preference number: 5 (lower is better)
Translates to: IRETETWVGGQGANA*PALPARHPPGGMCG
Trigger: GCCGCACATGCCTCCTGGAGGGTGCCGGGCCGGCAGTGCTGGGCAGGCGTTGGCTCCCTGCCCACCAACCCAGGTCTCAGTTTCTCTTAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS GCA 90 bp AACGCCTGCCCAGCACTGCCGGCCCGGCACCCTCCAGGAGGCATGTaGGGCCCTGCAGTATGCATGAATAGCATCACGGCCAGTGTGCTG +
Preference number: 5 (lower is better)
Translates to: NACPALPARHPPGGM*GPAVCMNSITASVL
Trigger: CAGCACACTGGCCGTGATGCTATTCATGCATACTGCAGGGCCGCACATGCCTCCTGGAGGGTGCCGGGCCGGCAGTGCTGGGCAGGCGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS CCA 90 bp GCCTGCTTGGCCAAGCCGCTCTCGTCCAGCCCCAGCCCTTTCACGTaGCTGTGGGAGGCGATGCGCTGCGTCTTCGTAGTGCTCTTCACC +
Preference number: 5 (lower is better)
Translates to: ACLAKPLSSSPSPFT*LWEAMRCVFVVLFT
Trigger: GGTGAAGAGCACTACGAAGACGCAGCGCATCGCCTCCCACAGCCACGTGAAAGGGCTGGGGCTGGACGAGAGCGGCTTGGCCAAGCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS CCA 90 bp TGCGATGAGCCAGGTGAGGGTGAAATGCTTGGCCAGCAAACACCCTaGGGAGGCAGCCCCTCCACCCGCGGCCACCACTGCTGCAAGGTG +
Preference number: 5 (lower is better)
Translates to: CDEPGEGEMLGQQTP*GGSPSTRGHHCCKV
Trigger: CACCTTGCAGCAGTGGTGGCCGCGGGTGGAGGGGCTGCCTCCCCAGGGTGTTTGCTGGCCAAGCATTTCACCCTCACCTGGCTCATCGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000480616.1
ENST00000582176.1
ENST00000643698.1
ENST00000646055.1
CDS CCA 90 bp GCGGGCAGGAGCTGCAGGGGGAGCCCAGTCTCTGATGATCGCGGTTaGGCTTGGGGGACAGCACATTGGCTGCCCACAGATGGGAAAGGC +
Preference number: 5 (lower is better)
Translates to: AGRSCRGSPVSDDRG*AWGTAHWLPTDGKG
Trigger: GCCTTTCCCATCTGTGGGCAGCCAATGTGCTGTCCCCCAAGCCCAACCGCGATCATCAGAGACTGGGCTCCCCCTGCAGCTCCTGCCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS-3UTR CAA 90 bp AGCCCCAAGCCCAGGGGCAAGCGCCCACAGGCTGGACCCAGGCCAGGCACACCTGCCTCCTCACTGATGTaGATTCCTTCCGTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: SPKPRGKRPQAGPRPGTPASSLM*IPSVWA
Trigger: TGCCCAGACGGAAGGAATCAACATCAGTGAGGAGGC...AGGTGTGCCTGGCCTGGGTCCAGCCTGTGGGCGCTTGCCCCTGGGCTTGGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR CAA 90 bp AGCCCCAAGCCCAGGGGCAAGCGCCCACAGGCTGGACCCAGGCCAGGCACACCTATTTTAGCAAGCAAGTaGGCCGGGGTCAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: SPKPRGKRPQAGPRPGTPILASK*AGVSSC
Trigger: GCAGCTGCTGACCCCGGCCAACTTGCTTGCTAAAAT...AGGTGTGCCTGGCCTGGGTCCAGCCTGTGGGCGCTTGCCCCTGGGCTTGGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS TCA 90 bp GCTTCAGGCAGGAGGAGCCACGTGAGAGAGAAACCCTGCCTACGGTaGCCTCCAGTTCCTAGACCACCCACTCGGAGCACGGCGCTCGGC +
Preference number: 5 (lower is better)
Translates to: ASGRRSHVREKPCLR*PPVPRPPTRSTALG
Trigger: GCCGAGCGCCGTGCTCCGAGTGGGTGGTCTAGGAACTGGAGGTCACCGTAGGCAGGGTTTCTCTCTCACGTGGCTCCTCCTGCCTGAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464873.5
CDS TCA 90 bp GCTTCAGGCAGGAGGAGCCACGTGAGAGAGAAACCCTGCCTACGGTaGCCTCCAGTTCCTAGACCACCCAGTCGGAGCACGGCGCTCGGC +
Preference number: 5 (lower is better)
Translates to: ASGRRSHVREKPCLR*PPVPRPPSRSTALG
Trigger: GCCGAGCGCCGTGCTCCGACTGGGTGGTCTAGGAACTGGAGGTCACCGTAGGCAGGGTTTCTCTCTCACGTGGCTCCTCCTGCCTGAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646581.1
CDS-3UTR CAA 90 bp GACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATCCCTGAGGCCGCCTGCTaGGCCAAGCCGCTCTCGTCC +
Preference number: 5 (lower is better)
Translates to: DPGQAHLGSLLLLKTSAIPEAAC*AKPLSS
Trigger: GGACGAGAGCGGCTTGGCCAAGCAGGCGGCCTCAGG...GATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS CCA 90 bp TTGGCCAAGCCGCTCTCGTCCAGCCCCAGCCCTTTCACGTGGCTGTaGGAGGCGATGCGCTGCGTCTTCGTAGTGCTCTTCACCTCCTCA +
Preference number: 5 (lower is better)
Translates to: LAKPLSSSPSPFTWL*EAMRCVFVVLFTSS
Trigger: TGAGGAGGTGAAGAGCACTACGAAGACGCAGCGCATCGCCTCCCACAGCCACGTGAAAGGGCTGGGGCTGGACGAGAGCGGCTTGGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR CAA 90 bp ATCGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGGCCTCCACCGCCGCCTTaGACAAGCAGCCGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: IALFHLLATRTDKVRALRPPPPP*TSSRRA
Trigger: GGCTCTGCGGCTGCTTGTCAAAGGCGGCGGTGGAGG...CCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS GCA 90 bp GAAGATCTTGGTAGAGTTGGAGGGGAGGCAGGCTGGCGGCGGGGATaGTGTAACACGGTGGACCAGGATCCTGCAGGCGTACCAGCACTG +
Preference number: 5 (lower is better)
Translates to: EDLGRVGGEAGWRRG*CNTVDQDPAGVPAL
Trigger: CAGTGCTGGTACGCCTGCAGGATCCTGGTCCACCGTGTTACAGCATCCCCGCCGCCAGCCTGCCTCCCCTCCAACTCTACCAAGATCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS-3UTR CAA 90 bp AGCCCCAAGCCCAGGGGCAAGCGCCCACAGGCTGGACCCAGGCCAGGCACACCTACATGGCTAATGGTTTaGCCATATCCTCCCATGGGA +
Preference number: 5 (lower is better)
Translates to: SPKPRGKRPQAGPRPGTPTWLMV*PYPPMG
Trigger: TCCCATGGGAGGATATGGCAAAACCATTAGCCATGT...AGGTGTGCCTGGCCTGGGTCCAGCCTGTGGGCGCTTGCCCCTGGGCTTGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR CAA 90 bp GGCCACACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCCAGAATACCTCAGTGTGGTCTaGGTGCCAATCTCCCCCAGG +
Preference number: 5 (lower is better)
Translates to: GHTHRQGPSPSGGVLPPEYLSVV*VPISPR
Trigger: CCTGGGGGAGATTGGCACCAAGACCACACTGAGGTA...TTCTGGCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR CAA 90 bp AGCCCCAAGCCCAGGGGCAAGCGCCCACAGGCTGGACCCAGGCCAGGCACACCTGTTCCTTTGGCTGTTTaGAGTCCTATGATCACATGG +
Preference number: 5 (lower is better)
Translates to: SPKPRGKRPQAGPRPGTPVPLAV*SPMITW
Trigger: CCATGTGATCATAGGACTCAAAACAGCCAAAGGAAC...AGGTGTGCCTGGCCTGGGTCCAGCCTGTGGGCGCTTGCCCCTGGGCTTGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR CAA 90 bp GCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCCAGGACAAGCATGTTCATaGAGTCATGGGACCTGCCAG +
Preference number: 5 (lower is better)
Translates to: AGHTHRQGPSPSGGVLPPGQACS*SHGTCQ
Trigger: CTGGCAGGTCCCATGACTCAATGAACATGCTTGTCC...TGGCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS GCA 90 bp CTGCCGGCCCGGCACCCTCCAGGAGGCATGTGCGGCCCTGCAGTATaGATGAATAGCATCACGGCCAGTGTGCTGTATTCAACTGACTCA +
Preference number: 5 (lower is better)
Translates to: LPARHPPGGMCGPAV*MNSITASVLYSTDS
Trigger: TGAGTCAGTTGAATACAGCACACTGGCCGTGATGCTATTCATGCATACTGCAGGGCCGCACATGCCTCCTGGAGGGTGCCGGGCCGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS-3UTR CAA 90 bp CTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCTACCTCAGTGTGGTCTaGGTGCCAATCTCCCCCAGG +
Preference number: 5 (lower is better)
Translates to: LDPGQAHLGSLLLLKTSAYLSVV*VPISPR
Trigger: CCTGGGGGAGATTGGCACCAAGACCACACTGAGGTA...GGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CAA 90 bp GCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCTACCTCAGTGTGGTCTaGGTGCCAATCTCCCCCAGG +
Preference number: 5 (lower is better)
Translates to: AGPRPGTPGESLTAENLSYLSVV*VPISPR
Trigger: CCTGGGGGAGATTGGCACCAAGACCACACTGAGGTA...GCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CAA 90 bp TTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTACCTCAGTGTGGTCTaGGTGCCAATCTCCCCCAGG +
Preference number: 5 (lower is better)
Translates to: FSICWPHAQTRSEPFGRRYLSVV*VPISPR
Trigger: CCTGGGGGAGATTGGCACCAAGACCACACTGAGGTA...ACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR CAA 90 bp CTGCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCAAGTTTCAGAATGCCTaGTGTGCAGTCCCCCACTCT +
Preference number: 5 (lower is better)
Translates to: LLATRTDKVRALREAFYRKFQNA*CAVPHS
Trigger: AGAGTGGGGGACTGCACACAAGGCATTCTGAAACTT...GCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS TCA 90 bp ACTGTTTGGGCCAGGAGCTCTGGGTTCGAATGGCGGCAGCAAGGGTaGACTAGCTCTGAGTGGCAGTCCTGGCTCTGCTGCTTACTCTCC +
Preference number: 5 (lower is better)
Translates to: TVWARSSGFEWRQQG*TSSEWQSWLCCLLS
Trigger: GGAGAGTAAGCAGCAGAGCCAGGACTGCCACTCAGAGCTAGTTCACCCTTGCTGCCGCCATTCGAACCCAGAGCTCCTGGCCCAAACAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478243.1
ENST00000643930.1
CDS TCA 90 bp CGGCCCGGCACCCTCCAGGAGGCATGTGCGGCCCTGCAGTATGCATaGATAGCATCACGGCCAGTGTGCTGTATTCAACTGACTCAAGTG +
Preference number: 5 (lower is better)
Translates to: RPGTLQEACAALQYA*IASRPVCCIQLTQV
Trigger: CACTTGAGTCAGTTGAATACAGCACACTGGCCGTGATGCTATTCATGCATACTGCAGGGCCGCACATGCCTCCTGGAGGGTGCCGGGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS CCA 90 bp TGTTGCTCAGATTTCTCACTGTGCAGCATAAGAGAAACTGAGACCTaGGTTGGTGGGCAGGGAGCCAACGCCTGCCCAGCACTGCCGGCC +
Preference number: 5 (lower is better)
Translates to: CCSDFSLCSIRETET*VGGQGANACPALPA
Trigger: GGCCGGCAGTGCTGGGCAGGCGTTGGCTCCCTGCCCACCAACCCAGGTCTCAGTTTCTCTTATGCTGCACAGTGAGAAATCTGAGCAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS-3UTR CAA 90 bp GGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATAGAGCCAGAGCTGTCTaGCCAGTTCCAGGAGGTCCT +
Preference number: 5 (lower is better)
Translates to: GPRPGTPGESLTAENLSHRARAV*PVPGGP
Trigger: AGGACCTCCTGGAACTGGCAAGACAGCTCTGGCTCT...ATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR CAA 90 bp ACACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCCAGAATCTTAGAGCCAGAGCTGTCTaGCCAGTTCCAGGAGGTCCT +
Preference number: 5 (lower is better)
Translates to: TRTDKVRALREAFYRQNLRARAV*PVPGGP
Trigger: AGGACCTCCTGGAACTGGCAAGACAGCTCTGGCTCT...AAGATTCTGGCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR CAA 90 bp AGGCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCACTTCACTCCCCACCATaGGGCAGAAGGGGACCTTAC +
Preference number: 5 (lower is better)
Translates to: RLDPGQAHLGSLLLLKTSLHSPP*GRRGPY
Trigger: GTAAGGTCCCCTTCTGCCCAATGGTGGGGAGTGAAG...TGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR CAA 90 bp GACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATCCTTCACTCCCCACCATaGGGCAGAAGGGGACCTTAC +
Preference number: 5 (lower is better)
Translates to: DPGQAHLGSLLLLKTSAILHSPP*GRRGPY
Trigger: GTAAGGTCCCCTTCTGCCCAATGGTGGGGAGTGAAG...GATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR CAA 90 bp TCGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGGGGCCTCCTCACTGATGTaGATTCCTTCCGTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: SHFSICWPHAQTRSEPFGASSLM*IPSVWA
Trigger: TGCCCAGACGGAAGGAATCAACATCAGTGAGGAGGC...CCCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR CAA 90 bp GGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATTACCTCAGTGTGGTCTaGGTGCCAATCTCCCCCAGG +
Preference number: 5 (lower is better)
Translates to: GPRPGTPGESLTAENLSHYLSVV*VPISPR
Trigger: CCTGGGGGAGATTGGCACCAAGACCACACTGAGGTA...ATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CAA 90 bp CTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATTTTAGCAAGCAAGTaGGCCGGGGTCAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: LDPGQAHLGSLLLLKTSAILASK*AGVSSC
Trigger: GCAGCTGCTGACCCCGGCCAACTTGCTTGCTAAAAT...GGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS GCA 90 bp TCGTCCAGCCCCAGCCCTTTCACGTGGCTGTGGGAGGCGATGCGCTaGGTCTTCGTAGTGCTCTTCACCTCCTCAATCTTCATTTTGCAG +
Preference number: 5 (lower is better)
Translates to: SSSPSPFTWLWEAMR*VFVVLFTSSIFILQ
Trigger: CTGCAAAATGAAGATTGAGGAGGTGAAGAGCACTACGAAGACGCAGCGCATCGCCTCCCACAGCCACGTGAAAGGGCTGGGGCTGGACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR CAA 90 bp GACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATCGCCTCCTCACTGATGTaGATTCCTTCCGTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: DPGQAHLGSLLLLKTSAIASSLM*IPSVWA
Trigger: TGCCCAGACGGAAGGAATCAACATCAGTGAGGAGGC...GATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CAA 90 bp AGGCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCTCCTCACTGATGTaGATTCCTTCCGTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: RLDPGQAHLGSLLLLKTSASSLM*IPSVWA
Trigger: TGCCCAGACGGAAGGAATCAACATCAGTGAGGAGGC...TGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CAA 90 bp GGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATGCCTCCTCACTGATGTaGATTCCTTCCGTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: GPRPGTPGESLTAENLSHASSLM*IPSVWA
Trigger: TGCCCAGACGGAAGGAATCAACATCAGTGAGGAGGC...ATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CAA 90 bp AGGCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAATTTTAGCAAGCAAGTaGGCCGGGGTCAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: RLDPGQAHLGSLLLLKTSILASK*AGVSSC
Trigger: GCAGCTGCTGACCCCGGCCAACTTGCTTGCTAAAAT...TGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CAA 90 bp CGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGGGAGACCTGATGACACAGTaGCCTCGGTTGGATGCAAAG +
Preference number: 5 (lower is better)
Translates to: RTFPSAGHTHRQGPSPSGDLMTQ*PRLDAK
Trigger: CTTTGCATCCAACCGAGGCAACTGTGTCATCAGGTC...TCCCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472125.5
ENST00000643535.1
CDS GCA 90 bp AGAACAGGAGCCAGGGCCCTGGCTAATGAGCTACCACATGGTCCCTaGTCTCTAGTTCTGTGCATCTTCTCTGCCACAAGAAGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: RTGARALANELPHGP*SLVLCIFSATRRPR
Trigger: CCTGGGCCTTCTTGTGGCAGAGAAGATGCACAGAACTAGAGAGCAGGGACCATGTGGTAGCTCATTAGCCAGGGCCCTGGCTCCTGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS GCA 90 bp AGTAGGCAGCACTGGCACCAGGAGCAGAGCCCAGTGCTGGGCTTGTaGCAGCTGCTACGAACACAGAAAAGGGGAGACAAAGTTGTCACT +
Preference number: 5 (lower is better)
Translates to: SRQHWHQEQSPVLGL*QLLRTQKRGDKVVT
Trigger: AGTGACAACTTTGTCTCCCCTTTTCTGTGTTCGTAGCAGCTGGCACAAGCCCAGCACTGGGCTCTGCTCCTGGTGCCAGTGCTGCCTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS CCA 90 bp AAAGTCAGCTGCAGACCAGGTTGTCCTATGGGCCTTACCTCAGTGTaGTCTTGGTGCCAATCTCCCCCAGGTGGTTCAGTGCCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: KVSCRPGCPMGLTSV*SWCQSPPGGSVPPH
Trigger: GTGAGGAGGCACTGAACCACCTGGGGGAGATTGGCACCAAGACCACACTGAGGTAAGGCCCATAGGACAACCTGGTCTGCAGCTGACTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS CCA 90 bp GTACCAGCTCACCTCAGTGTGGTCTTGGTGCCAATCTCCCCCAGGTaGTTCAGTGCCTCCTCACTGATGTTGATTCCTTCCGTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: VPAHLSVVLVPISPR*FSASSLMLIPSVWA
Trigger: TGCCCAGACGGAAGGAATCAACATCAGTGAGGAGGCACTGAACCACCTGGGGGAGATTGGCACCAAGACCACACTGAGGTGAGCTGGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS CCA 90 bp TTGAAACTCAAGTGCCCTGGCACCCATCGCGCCAGGAAGAGCGGATaGATAGAGTCCCATGCCCTAGGAAGGGACCTGCCTTTATTGTCC +
Preference number: 5 (lower is better)
Translates to: LKLKCPGTHRARKSG*IESHALGRDLPLLS
Trigger: GGACAATAAAGGCAGGTCCCTTCCTAGGGCATGGGACTCTATCCATCCGCTCTTCCTGGCGCGATGGGTGCCAGGGCACTTGAGTTTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS CCA 90 bp GCCACTGTGAAGGGACATGCTCTGCCGGTCCTGTGTTTGAGCCGCTaGAGAACAATTAGGAGAACTGTCTATGTCTGCGCTCCTCCCTGG +
Preference number: 5 (lower is better)
Translates to: ATVKGHALPVLCLSR*RTIRRTVYVCAPPW
Trigger: CCAGGGAGGAGCGCAGACATAGACAGTTCTCCTAATTGTTCTCCAGCGGCTCAAACACAGGACCGGCAGAGCATGTCCCTTCACAGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS-3UTR CAA 90 bp GCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCTGTGCACATCCCCTTTaGGCAAGGGGACATACTCTT +
Preference number: 5 (lower is better)
Translates to: AGPRPGTPGESLTAENLSCAHPL*ARGHTL
Trigger: AAGAGTATGTCCCCTTGCCAAAAGGGGATGTGCACA...GCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CAA 90 bp CACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCCAGAATCTTCACACAGTTGCCTCGGTaGGATGCAAAGATGACGATG +
Preference number: 5 (lower is better)
Translates to: HAQTRSEPFGRRSTARIFTQLPR*DAKMTM
Trigger: CATCGTCATCTTTGCATCCAACCGAGGCAACTGTGT...GAAGATTCTGGCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CAA 90 bp GACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATCCCTCTGATGACACAGTaGCCTCGGTTGGATGCAAAG +
Preference number: 5 (lower is better)
Translates to: DPGQAHLGSLLLLKTSAIPLMTQ*PRLDAK
Trigger: CTTTGCATCCAACCGAGGCAACTGTGTCATCAGAGG...GATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CAA 90 bp AGGCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCACCTCTGATGACACAGTaGCCTCGGTTGGATGCAAAG +
Preference number: 5 (lower is better)
Translates to: RLDPGQAHLGSLLLLKTSPLMTQ*PRLDAK
Trigger: CTTTGCATCCAACCGAGGCAACTGTGTCATCAGAGG...TGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CAA 90 bp TCGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGGGAAGTTTCAGAATGCCTaGTGTGCAGTCCCCCACTCT +
Preference number: 5 (lower is better)
Translates to: SHFSICWPHAQTRSEPFGKFQNA*CAVPHS
Trigger: AGAGTGGGGGACTGCACACAAGGCATTCTGAAACTT...CCCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CAA 90 bp GGCCACACGCACAGACAAGGTCCGAGCCCTTCGGGAGGCGTTCTACCGCCAGAAAAGGCTAGAAGCAAATaGAGTTGCCTGTTCGTTCCT +
Preference number: 5 (lower is better)
Translates to: GHTHRQGPSPSGGVLPPEKARSK*SCLFVP
Trigger: AGGAACGAACAGGCAACTCAATTTGCTTCTAGCCTT...TTCTGGCGGTAGAACGCCTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS GCA 90 bp TGTGATGTCCTCAGTGCCTCTGATGACACAGTTGCCTCGGTTGGATaGAAAGATGACGATGGGAGCGATAGAAGACTCCAGGGCGCGGTG +
Preference number: 5 (lower is better)
Translates to: CDVLSASDDTVASVG*KDDDGSDRRLQGAV
Trigger: CACCGCGCCCTGGAGTCTTCTATCGCTCCCATCGTCATCTTTGCATCCAACCGAGGCAACTGTGTCATCAGAGGCACTGAGGACATCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322623.10
ENST00000464873.5
ENST00000585057.5
ENST00000643444.2
ENST00000645975.1
ENST00000646581.1
CDS GCA 90 bp TGCTGTATTCAACTGACTCAAGTGTGGCTGGTGCCCAAGGAGGTATaGAGCTTCCCAAGTGGCTCACTCTTGCCTCCATGTCCTCCCGTC +
Preference number: 5 (lower is better)
Translates to: CCIQLTQVWLVPKEV*SFPSGSLLPPCPPV
Trigger: GACGGGAGGACATGGAGGCAAGAGTGAGCCACTTGGGAAGCTGCATACCTCCTTGGGCACCAGCCACACTTGAGTCAGTTGAATACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS GCA 90 bp GCCCTGGCTAATGAGCTACCACATGGTCCCTGCTCTCTAGTTCTGTaGATCTTCTCTGCCACAAGAAGGCCCAGGGTCAAAGCACTCTCC +
Preference number: 5 (lower is better)
Translates to: ALANELPHGPCSLVL*IFSATRRPRVKALS
Trigger: GGAGAGTGCTTTGACCCTGGGCCTTCTTGTGGCAGAGAAGATGCACAGAACTAGAGAGCAGGGACCATGTGGTAGCTCATTAGCCAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS CCA 90 bp TGCACTGAGTACCTCAGTGTGGTCTTGGTGCCAATCTCCCCCAGGTaGTTCAGTGCCTCCTCACTGATGTTGATTCCTTCCGTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: CTEYLSVVLVPISPR*FSASSLMLIPSVWA
Trigger: TGCCCAGACGGAAGGAATCAACATCAGTGAGGAGGCACTGAACCACCTGGGGGAGATTGGCACCAAGACCACACTGAGGTACTCAGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS CCA 90 bp TATGGGCCTTACCTCAGTGTGGTCTTGGTGCCAATCTCCCCCAGGTaGTTCAGTGCCTCCTCACTGATGTTGATTCCTTCCGTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: YGPYLSVVLVPISPR*FSASSLMLIPSVWA
Trigger: TGCCCAGACGGAAGGAATCAACATCAGTGAGGAGGCACTGAACCACCTGGGGGAGATTGGCACCAAGACCACACTGAGGTAAGGCCCATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS CCA 90 bp CCTACAAAGCTGGCTACAAAGTCAGCTGCAGACCAGGTTGTCCTATaGGCCTTACCTCAGTGTGGTCTTGGTGCCAATCTCCCCCAGGTG +
Preference number: 5 (lower is better)
Translates to: PTKLATKSAADQVVL*ALPQCGLGANLPQV
Trigger: CACCTGGGGGAGATTGGCACCAAGACCACACTGAGGTAAGGCCCATAGGACAACCTGGTCTGCAGCTGACTTTGTAGCCAGCTTTGTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR CAA 90 bp CTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCTCCTCAATCTTCATTTaGCAGACGCCGGGAGCTAAA +
Preference number: 5 (lower is better)
Translates to: LDPGQAHLGSLLLLKTSASSIFI*QTPGAK
Trigger: TTTAGCTCCCGGCGTCTGCAAAATGAAGATTGAGGA...GGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR CAA 90 bp AGGCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCATGTGCACATCCCCTTTaGGCAAGGGGACATACTCTT +
Preference number: 5 (lower is better)
Translates to: RLDPGQAHLGSLLLLKTSCAHPL*ARGHTL
Trigger: AAGAGTATGTCCCCTTGCCAAAAGGGGATGTGCACA...TGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CAA 90 bp GACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATCACACAGTTGCCTCGGTaGGATGCAAAGATGACGATG +
Preference number: 5 (lower is better)
Translates to: DPGQAHLGSLLLLKTSAITQLPR*DAKMTM
Trigger: CATCGTCATCTTTGCATCCAACCGAGGCAACTGTGT...GATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CAA 90 bp AGGCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAACACAGTTGCCTCGGTaGGATGCAAAGATGACGATG +
Preference number: 5 (lower is better)
Translates to: RLDPGQAHLGSLLLLKTSTQLPR*DAKMTM
Trigger: CATCGTCATCTTTGCATCCAACCGAGGCAACTGTGT...TGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CAA 90 bp CCAGAATCTTCCCAACCTCATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTCCTCCACCGCCGCCTTaGACAAGCAGCCGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: PESSQPHESHRHHLCLCSPPPPP*TSSRRA
Trigger: GGCTCTGCGGCTGCTTGTCAAAGGCGGCGGTGGAGG...ACTGCAAAGACAAAGATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR CAA 90 bp CCGAGCCCTTCGGGAGGCGTTCTACCGCCAGAATCTTCCCAACCTCATGAATCTGACCTGATGACACAGTaGCCTCGGTTGGATGCAAAG +
Preference number: 5 (lower is better)
Translates to: PSPSGGVLPPESSQPHESDLMTQ*PRLDAK
Trigger: CTTTGCATCCAACCGAGGCAACTGTGTCATCAGGTC...AGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAACGCCTCCCGAAGGGCTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472125.5
ENST00000643535.1
CDS-3UTR CAA 90 bp AGGCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCATCCTCAATCTTCATTTaGCAGACGCCGGGAGCTAAA +
Preference number: 5 (lower is better)
Translates to: RLDPGQAHLGSLLLLKTSSSIFI*QTPGAK
Trigger: TTTAGCTCCCGGCGTCTGCAAAATGAAGATTGAGGA...TGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR CAA 90 bp GGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATACATGGCTAATGGTTTaGCCATATCCTCCCATGGGA +
Preference number: 5 (lower is better)
Translates to: GPRPGTPGESLTAENLSHTWLMV*PYPPMG
Trigger: TCCCATGGGAGGATATGGCAAAACCATTAGCCATGT...ATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR CAA 90 bp GCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCATCTCCCCTCGAAGTTaGTCTGTGATTTCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: AGPRPGTPGESLTAENLSISPRS*SVISVF
Trigger: GAAGACAGAAATCACAGACAAACTTCGAGGGGAGAT...GCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CAA 90 bp CTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATCTCCCCTCGAAGTTaGTCTGTGATTTCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: LDPGQAHLGSLLLLKTSAISPRS*SVISVF
Trigger: GAAGACAGAAATCACAGACAAACTTCGAGGGGAGAT...GGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CAA 90 bp GCACTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGGGAGCCCTGGTCGATGTACTaGTTCACCACCTTATTAATC +
Preference number: 5 (lower is better)
Translates to: ALFHLLATRTDKVRALREPWSMY*FTTLLI
Trigger: GATTAATAAGGTGGTGAACAAGTACATCGACCAGGG...CTCCCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CAA 90 bp GCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCATGCTGTCCTTCCCGTaGATTTTAGCAAGCAAGTTG +
Preference number: 5 (lower is better)
Translates to: AGPRPGTPGESLTAENLSMLSFP*ILASKL
Trigger: CAACTTGCTTGCTAAAATCAACGGGAAGGACAGCAT...GCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CAA 90 bp CATCGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGTCATCGCCACCATCTTaGTCTTTGCAGTGGTCATCT +
Preference number: 5 (lower is better)
Translates to: HRTFPSAGHTHRQGPSPSSSPPS*SLQWSS
Trigger: AGATGACCACTGCAAAGACAAAGATGGTGGCGATGA...CGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS TCA 90 bp GCCCAATGGCCCTGCGGAAGTTCTCCATCAGCACCTCTGTCTTCTTaGTCTCAGTTGAGTAAACTTCACTCCCCACCATTGGGCAGAAGG +
Preference number: 5 (lower is better)
Translates to: AQWPCGSSPSAPLSS*SQLSKLHSPPLGRR
Trigger: CCTTCTGCCCAATGGTGGGGAGTGAAGTTTACTCAACTGAGATCAAGAAGACAGAGGTGCTGATGGAGAACTTCCGCAGGGCCATTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000464873.5
ENST00000643444.2
ENST00000646581.1
CDS TCA 90 bp AAGACAATGTTGCTCAGATTTCTCACTGTGCAGCATAAGAGAAACTaGGACCTGGGTTGGTGGGCAGGGAGCCAACGCCTGCCCAGCACT +
Preference number: 5 (lower is better)
Translates to: KTMLLRFLTVQHKRN*DLGWWAGSQRLPST
Trigger: AGTGCTGGGCAGGCGTTGGCTCCCTGCCCACCAACCCAGGTCTCAGTTTCTCTTATGCTGCACAGTGAGAAATCTGAGCAACATTGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS GCA 90 bp CAAGAAGGCCCAGGGTCAAAGCACTCTCCACCAGAGGGGAGCATCTaGTGCAGGACATGGGGACTTCACCCTTACTCTAGCTTGTTAAAA +
Preference number: 5 (lower is better)
Translates to: QEGPGSKHSPPEGSI*CRTWGLHPYSSLLK
Trigger: TTTTAACAAGCTAGAGTAAGGGTGAAGTCCCCATGTCCTGCAGCAGATGCTCCCCTCTGGTGGAGAGTGCTTTGACCCTGGGCCTTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS-3UTR CAA 90 bp GGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATGTTCCTTTGGCTGTTTaGAGTCCTATGATCACATGG +
Preference number: 5 (lower is better)
Translates to: GPRPGTPGESLTAENLSHVPLAV*SPMITW
Trigger: CCATGTGATCATAGGACTCAAAACAGCCAAAGGAAC...ATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR CAA 90 bp GCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCTCCAGTTTCAACTGTTaGGTTCCTTTGGCTGTTTTG +
Preference number: 5 (lower is better)
Translates to: AGPRPGTPGESLTAENLSSSFNC*VPLAVL
Trigger: CAAAACAGCCAAAGGAACCAAACAGTTGAAACTGGA...GCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR CAA 90 bp GGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATATCTCCCCTCGAAGTTaGTCTGTGATTTCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: GPRPGTPGESLTAENLSHISPRS*SVISVF
Trigger: GAAGACAGAAATCACAGACAAACTTCGAGGGGAGAT...ATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CAA 90 bp AGGCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAATCTCCCCTCGAAGTTaGTCTGTGATTTCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: RLDPGQAHLGSLLLLKTSISPRS*SVISVF
Trigger: GAAGACAGAAATCACAGACAAACTTCGAGGGGAGAT...TGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CAA 90 bp GGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATCCCTGGTCGATGTACTaGTTCACCACCTTATTAATC +
Preference number: 5 (lower is better)
Translates to: GPRPGTPGESLTAENLSHPWSMY*FTTLLI
Trigger: GATTAATAAGGTGGTGAACAAGTACATCGACCAGGG...ATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CAA 90 bp GACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATCCCCTGGTCGATGTACTaGTTCACCACCTTATTAATC +
Preference number: 5 (lower is better)
Translates to: DPGQAHLGSLLLLKTSAIPWSMY*FTTLLI
Trigger: GATTAATAAGGTGGTGAACAAGTACATCGACCAGGG...GATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CAA 90 bp AGGCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCACCCTGGTCGATGTACTaGTTCACCACCTTATTAATC +
Preference number: 5 (lower is better)
Translates to: RLDPGQAHLGSLLLLKTSPWSMY*FTTLLI
Trigger: GATTAATAAGGTGGTGAACAAGTACATCGACCAGGG...TGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CAA 90 bp AGCCCTTCGGGAGGCGTTCTACCGCCAGAATCTTCCCAACCTCATGAATCTCATCCTCTGATGACACAGTaGCCTCGGTTGGATGCAAAG +
Preference number: 5 (lower is better)
Translates to: SPSGGVLPPESSQPHESHPLMTQ*PRLDAK
Trigger: CTTTGCATCCAACCGAGGCAACTGTGTCATCAGAGG...ATGAGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAACGCCTCCCGAAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CAA 90 bp AGGCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAATGCTGTCCTTCCCGTaGATTTTAGCAAGCAAGTTG +
Preference number: 5 (lower is better)
Translates to: RLDPGQAHLGSLLLLKTSMLSFP*ILASKL
Trigger: CAACTTGCTTGCTAAAATCAACGGGAAGGACAGCAT...TGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CAA 90 bp GGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATATGCTGTCCTTCCCGTaGATTTTAGCAAGCAAGTTG +
Preference number: 5 (lower is better)
Translates to: GPRPGTPGESLTAENLSHMLSFP*ILASKL
Trigger: CAACTTGCTTGCTAAAATCAACGGGAAGGACAGCAT...ATGGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS-3UTR CAA 90 bp CTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCCATGGGAACTCCCTATaGTATGTTCACAATGACTCT +
Preference number: 5 (lower is better)
Translates to: LDPGQAHLGSLLLLKTSAHGNSL*YVHNDS
Trigger: AGAGTCATTGTGAACATACAATAGGGAGTTCCCATG...GGCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR CAA 90 bp GCTGGACCCAGGCCAGGCACACCTGGGGAGTCTCTTACTGCTGAAAACCTCAGCCATGGGAACTCCCTATaGTATGTTCACAATGACTCT +
Preference number: 5 (lower is better)
Translates to: AGPRPGTPGESLTAENLSHGNSL*YVHNDS
Trigger: AGAGTCATTGTGAACATACAATAGGGAGTTCCCATG...GCTGAGGTTTTCAGCAGTAAGAGACTCCCCAGGTGTGCCTGGCCTGGGTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS-3UTR CAA 90 bp TCGGGAGGCGTTCTACCGCCAGAATCTTCCCAACCTCATGAATCTCATCGCCACAAGTTTCAGAATGCCTaGTGTGCAGTCCCCCACTCT +
Preference number: 5 (lower is better)
Translates to: SGGVLPPESSQPHESHRHKFQNA*CAVPHS
Trigger: AGAGTGGGGGACTGCACACAAGGCATTCTGAAACTT...GTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAACGCCTCCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CAA 90 bp ATCGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCGAGCCCTTCGGTCCAGTTTCAACTGTTaGGTTCCTTTGGCTGTTTTG +
Preference number: 5 (lower is better)
Translates to: IALFHLLATRTDKVRALRSSFNC*VPLAVL
Trigger: CAAAACAGCCAAAGGAACCAAACAGTTGAAACTGGA...CCGAAGGGCTCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR CAA 90 bp GAGGCGTTCTACCGCCAGAATCTTCCCAACCTCATGAATCTCATCGCCACCATCACACAGTTGCCTCGGTaGGATGCAAAGATGACGATG +
Preference number: 5 (lower is better)
Translates to: EAFYRQNLPNLMNLIATITQLPR*DAKMTM
Trigger: CATCGTCATCTTTGCATCCAACCGAGGCAACTGTGT...GATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAACGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS TCA 90 bp CCTGCGGAAGTTCTCCATCAGCACCTCTGTCTTCTTGATCTCAGTTaGGTAAACTTCACTCCCCACCATTGGGCAGAAGGGGACCTTACT +
Preference number: 5 (lower is better)
Translates to: PAEVLHQHLCLLDLS*VNFTPHHWAEGDLT
Trigger: AGTAAGGTCCCCTTCTGCCCAATGGTGGGGAGTGAAGTTTACTCAACTGAGATCAAGAAGACAGAGGTGCTGATGGAGAACTTCCGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000464873.5
ENST00000643444.2
ENST00000646581.1
CDS GCA 90 bp GGTCATAGGAGACAGCTTAAGCTAAGTGCCTCGCCTTCAGTGAGATaGACTGAATCTGTGGCTCAGCTTCCAGAATGTCAGGGACACTCT +
Preference number: 5 (lower is better)
Translates to: GHRRQLKLSASPSVR*TESVAQLPECQGHS
Trigger: AGAGTGTCCCTGACATTCTGGAAGCTGAGCCACAGATTCAGTGCATCTCACTGAAGGCGAGGCACTTAGCTTAAGCTGTCTCCTATGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS CCA 90 bp ACCTCATCAACAAACAGCACACCCGGGACCAGCTCAGCAATGCCCTaGTCGATGTACTTGTTCACCACCTTATTAATCTCCCCTCGAAGT +
Preference number: 5 (lower is better)
Translates to: TSSTNSTPGTSSAMP*SMYLFTTLLISPRS
Trigger: ACTTCGAGGGGAGATTAATAAGGTGGTGAACAAGTACATCGACCAGGGCATTGCTGAGCTGGTCCCGGGTGTGCTGTTTGTTGATGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000322623.10
ENST00000464873.5
ENST00000472125.5
ENST00000478892.1
ENST00000585057.5
ENST00000643444.2
ENST00000643535.1
ENST00000645975.1
ENST00000646091.1
ENST00000646581.1
CDS-3UTR CAA 90 bp CCTCTGCCAACAGGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTTCACTCCCCACCATaGGGCAGAAGGGGACCTTAC +
Preference number: 5 (lower is better)
Translates to: PLPTGMEFEGAIIALFHLLHSPP*GRRGPY
Trigger: GTAAGGTCCCCTTCTGCCCAATGGTGGGGAGTGAAG...CAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCATTCCTGTTGGCAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR CAA 90 bp GGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGGTCCGACCCTGGTCGATGTACTaGTTCACCACCTTATTAATC +
Preference number: 5 (lower is better)
Translates to: GAIIALFHLLATRTDKVRPWSMY*FTTLLI
Trigger: GATTAATAAGGTGGTGAACAAGTACATCGACCAGGG...TCGGACCTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CAA 90 bp GGGAGTTTCCATGGTCTGGATTTAAGTTTCAGAATGCCTTGTGTGCAGTCCCCCCCTCTGATGACACAGTaGCCTCGGTTGGATGCAAAG +
Preference number: 5 (lower is better)
Translates to: GSFHGLDLSFRMPCVQSPPLMTQ*PRLDAK
Trigger: CTTTGCATCCAACCGAGGCAACTGTGTCATCAGAGG...GGGGGACTGCACACAAGGCATTCTGAAACTTAAATCCAGACCATGGAAACTCCC
51% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
CDS GCA 90 bp CTTGTTAAAAACCATCAGATAGATCCTCTGCATTTGAAACTCAAGTaGCCTGGCACCCATCGCGCCAGGAAGAGCGGATGGATAGAGTCC +
Preference number: 5 (lower is better)
Translates to: LVKNHQIDPLHLKLK*PGTHRARKSGWIES
Trigger: GGACTCTATCCATCCGCTCTTCCTGGCGCGATGGGTGCCAGGGCACTTGAGTTTCAAATGCAGAGGATCTATCTGATGGTTTTTAACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS-3UTR CAA 90 bp ATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTGGTCATCTATTTCCAGGTGCTTCACTCCCCACCATaGGGCAGAAGGGGACCTTAC +
Preference number: 5 (lower is better)
Translates to: MNLIATIFVFAVVIYFQVLHSPP*GRRGPY
Trigger: GTAAGGTCCCCTTCTGCCCAATGGTGGGGAGTGAAG...CACCTGGAAATAGATGACCACTGCAAAGACAAAGATGGTGGCGATGAGATTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR CAA 90 bp GAGGCGTTCTACCGCCAGAATCTTCCCAACCTCATGAATCTCATCGCCACCATCGTTCCTTTGGCTGTTTaGAGTCCTATGATCACATGG +
Preference number: 5 (lower is better)
Translates to: EAFYRQNLPNLMNLIATIVPLAV*SPMITW
Trigger: CCATGTGATCATAGGACTCAAAACAGCCAAAGGAAC...GATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAACGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR CAA 90 bp TTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGTGTGCACATCCCCTTTaGGCAAGGGGACATACTCTT +
Preference number: 5 (lower is better)
Translates to: FEGAIIALFHLLATRTDKCAHPL*ARGHTL
Trigger: AAGAGTATGTCCCCTTGCCAAAAGGGGATGTGCACA...CTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000643535.1
ENST00000646581.1
CDS-3UTR CAA 90 bp AGCCCTTCGGGAGGCGTTCTACCGCCAGAATCTTCCCAACCTCATGAATCTCATCCCTGGTCGATGTACTaGTTCACCACCTTATTAATC +
Preference number: 5 (lower is better)
Translates to: SPSGGVLPPESSQPHESHPWSMY*FTTLLI
Trigger: GATTAATAAGGTGGTGAACAAGTACATCGACCAGGG...ATGAGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAACGCCTCCCGAAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CAA 90 bp TTGTCTTTGCAGTGGTCATCTATTTCCAGGTGTGTCCAGATCCAACCCCAGGGAACACAGTTGCCTCGGTaGGATGCAAAGATGACGATG +
Preference number: 5 (lower is better)
Translates to: LSLQWSSISRCVQIQPQGTQLPR*DAKMTM
Trigger: CATCGTCATCTTTGCATCCAACCGAGGCAACTGTGT...TCCCTGGGGTTGGATCTGGACACACCTGGAAATAGATGACCACTGCAAAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CAA 90 bp CGCCACCATCTTTGTCTTTGCAGTGGTCATCTATTTCCAGGTGTGTCCAGATCCACACAGTTGCCTCGGTaGGATGCAAAGATGACGATG +
Preference number: 5 (lower is better)
Translates to: RHHLCLCSGHLFPGVSRSTQLPR*DAKMTM
Trigger: CATCGTCATCTTTGCATCCAACCGAGGCAACTGTGT...GGATCTGGACACACCTGGAAATAGATGACCACTGCAAAGACAAAGATGGTGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CAA 90 bp CAGACAAATGAGCATGGCCGTGTTCCTACAAAGCTGGCTACAAAGTCAGCTGCAACACAGTTGCCTCGGTaGGATGCAAAGATGACGATG +
Preference number: 5 (lower is better)
Translates to: QTNEHGRVPTKLATKSAATQLPR*DAKMTM
Trigger: CATCGTCATCTTTGCATCCAACCGAGGCAACTGTGT...TGCAGCTGACTTTGTAGCCAGCTTTGTAGGAACACGGCCATGCTCATTTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR CAA 90 bp TTCTACCGCCAGAATCTTCCCAACCTCATGAATCTCATCGCCACCATCTTTGTCCCTCTGATGACACAGTaGCCTCGGTTGGATGCAAAG +
Preference number: 5 (lower is better)
Translates to: FYRQNLPNLMNLIATIFVPLMTQ*PRLDAK
Trigger: CTTTGCATCCAACCGAGGCAACTGTGTCATCAGAGG...GACAAAGATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGGCGGTAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CAA 90 bp CTATTTCCAGGTGTGTCCAGATCCAACCCCAGGGAGTTTCCATGGTCTGGATTTAAGTTTCAGAATGCCTaGTGTGCAGTCCCCCACTCT +
Preference number: 5 (lower is better)
Translates to: LFPGVSRSNPREFPWSGFKFQNA*CAVPHS
Trigger: AGAGTGGGGGACTGCACACAAGGCATTCTGAAACTT...AAATCCAGACCATGGAAACTCCCTGGGGTTGGATCTGGACACACCTGGAAATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CAA 90 bp CAGTCCCCCACTCTGTGGGGTGCACTGTCATCATATTGTGTTGAAACGATGAGAGATACAGCTGTACCCTaGGAGATGGAGCAGTTAGGT +
Preference number: 5 (lower is better)
Translates to: QSPTLWGALSSYCVETMRDTAVP*EMEQLG
Trigger: ACCTAACTGCTCCATCTCCAAGGGTACAGCTGTATC...TCTCATCGTTTCAACACAATATGATGACAGTGCACCCCACAGAGTGGGGGACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR CAA 90 bp CAGCACTCTTCAGTCTGCACAGTCCTCAGTACAACTACTCATCTCTTCCATCGTGGACAAGCATGTTCATaGAGTCATGGGACCTGCCAG +
Preference number: 5 (lower is better)
Translates to: QHSSVCTVLSTTTHLFHRGQACS*SHGTCQ
Trigger: CTGGCAGGTCCCATGACTCAATGAACATGCTTGTCC...ACGATGGAAGAGATGAGTAGTTGTACTGAGGACTGTGCAGACTGAAGAGTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS TCA 90 bp TGCTCTCTCTCTCTCACTAGAGAGAGCAGCAGGTCAGAGCAATCGTaGAAGCGTCTGTCTCAGGCTGCTCGAAAATGGACAGTTCATAAA +
Preference number: 5 (lower is better)
Translates to: CSLSLTRESSRSEQS*KRLSQAARKWTVHK
Trigger: TTTATGAACTGTCCATTTTCGAGCAGCCTGAGACAGACGCTTTCACGATTGCTCTGACCTGCTGCTCTCTCTAGTGAGAGAGAGAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS-3UTR CAA 90 bp GGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACATGGCTAATGGTTTaGCCATATCCTCCCATGGGA +
Preference number: 5 (lower is better)
Translates to: GMEFEGAIIALFHLLATRTWLMV*PYPPMG
Trigger: TCCCATGGGAGGATATGGCAAAACCATTAGCCATGT...GCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR CAA 90 bp GAAACGATGAGATGGTATTTGAAGGCAGCAGGTTTCCAGATGAGCTGGACAAGCTGTGCACATCCCCTTTaGGCAAGGGGACATACTCTT +
Preference number: 5 (lower is better)
Translates to: ETMRWYLKAAGFQMSWTSCAHPL*ARGHTL
Trigger: AAGAGTATGTCCCCTTGCCAAAAGGGGATGTGCACA...GCTTGTCCAGCTCATCTGGAAACCTGCTGCCTTCAAATACCATCTCATCGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR CAA 90 bp GAGGTGATGGTGCCAGATACAGCTGTACCCTTGGAGATGGAGCAGTTAGGTAAGCCCTGGTCGATGTACTaGTTCACCACCTTATTAATC +
Preference number: 5 (lower is better)
Translates to: EVMVPDTAVPLEMEQLGKPWSMY*FTTLLI
Trigger: GATTAATAAGGTGGTGAACAAGTACATCGACCAGGG...CTTACCTAACTGCTCCATCTCCAAGGGTACAGCTGTATCTGGCACCATCACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR CAA 90 bp TTTGCAGTGGTCATCTATTTCCAGGTGTGTCCAGATCCAACCCCAGGGAGTTTCGGACAAGCATGTTCATaGAGTCATGGGACCTGTTTC +
Preference number: 5 (lower is better)
Translates to: FAVVIYFQVCPDPTPGSFGQACS*SHGTCF
Trigger: GAAACAGGTCCCATGACTCAATGAACATGCTTGTCC...GAAACTCCCTGGGGTTGGATCTGGACACACCTGGAAATAGATGACCACTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR CAA 90 bp GAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCAAAGTTTCAGAATGCCTaGTGTGCAGTCCCCCACTCT +
Preference number: 5 (lower is better)
Translates to: EWNLKVLSSHFSICWPHAKFQNA*CAVPHS
Trigger: AGAGTGGGGGACTGCACACAAGGCATTCTGAAACTT...TGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CAA 90 bp CTATTTCCAGGTGTGTCCAGATCCAACCCCAGGGAGTTTCCATGGTCTGGATTTTCATCGCCACCATCTTaGTCTTTGCAGTGGTCATCT +
Preference number: 5 (lower is better)
Translates to: LFPGVSRSNPREFPWSGFSSPPS*SLQWSS
Trigger: AGATGACCACTGCAAAGACAAAGATGGTGGCGATGA...AAATCCAGACCATGGAAACTCCCTGGGGTTGGATCTGGACACACCTGGAAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
CDS TCA 90 bp CATATCCTCCCATGGGATTCTCTGTCTCACACGGAGTTAGCTCTGTaGCTTCACCTTCATAAACTTCCTTGGTCTCCTTTATTCGCAGCC +
Preference number: 5 (lower is better)
Translates to: HILPWDSLSHTELAL*LHLHKLPWSPLFAA
Trigger: GGCTGCGAATAAAGGAGACCAAGGAAGTTTATGAAGGTGAAGTCACAGAGCTAACTCCGTGTGAGACAGAGAATCCCATGGGAGGATATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000464873.5
ENST00000643444.2
ENST00000646581.1
CDS-3UTR CAA 90 bp GGGAGTTTCCATGGTCTGGATTTAAGTTTCAGAATGCCTTGTGTGCAGTCCCCCGTTCCTTTGGCTGTTTaGAGTCCTATGATCACATGG +
Preference number: 5 (lower is better)
Translates to: GSFHGLDLSFRMPCVQSPVPLAV*SPMITW
Trigger: CCATGTGATCATAGGACTCAAAACAGCCAAAGGAAC...GGGGGACTGCACACAAGGCATTCTGAAACTTAAATCCAGACCATGGAAACTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR CAA 90 bp GAATCTTCCCAACCTCATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTGGTTGTGCACATCCCCTTTaGGCAAGGGGACATACTCTT +
Preference number: 5 (lower is better)
Translates to: ESSQPHESHRHHLCLCSGCAHPL*ARGHTL
Trigger: AAGAGTATGTCCCCTTGCCAAAAGGGGATGTGCACA...ACCACTGCAAAGACAAAGATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000643535.1
ENST00000646581.1
CDS-3UTR CAA 90 bp CTTTGTCTTTGCAGTGGTCATCTATTTCCAGGTGTGTCCAGATCCAACCCCAGGATCTCCCCTCGAAGTTaGTCTGTGATTTCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: LCLCSGHLFPGVSRSNPRISPRS*SVISVF
Trigger: GAAGACAGAAATCACAGACAAACTTCGAGGGGAGAT...CCTGGGGTTGGATCTGGACACACCTGGAAATAGATGACCACTGCAAAGACAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR CAA 90 bp TTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACAGACAAGATCTCCCCTCGAAGTTaGTCTGTGATTTCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: FEGAIIALFHLLATRTDKISPRS*SVISVF
Trigger: GAAGACAGAAATCACAGACAAACTTCGAGGGGAGAT...CTTGTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000643535.1
ENST00000646581.1
CDS-3UTR CAA 90 bp CGCCAGAATCTTCCCAACCTCATGAATCTCATCGCCACCATCTTTGTCTTTGCAGGACAAGCATGTTCATaGAGTCATGGGACCTGTTTC +
Preference number: 5 (lower is better)
Translates to: RQNLPNLMNLIATIFVFAGQACS*SHGTCF
Trigger: GAAACAGGTCCCATGACTCAATGAACATGCTTGTCC...TGCAAAGACAAAGATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR CAA 90 bp GAATCTCATCGCCACCATCTTTGTCTTTGCAGTGGTCATCTATTTCCAGGTGTGAAGTTTCAGAATGCCTaGTGTGCAGTCCCCCACTCT +
Preference number: 5 (lower is better)
Translates to: ESHRHHLCLCSGHLFPGVKFQNA*CAVPHS
Trigger: AGAGTGGGGGACTGCACACAAGGCATTCTGAAACTT...CACACCTGGAAATAGATGACCACTGCAAAGACAAAGATGGTGGCGATGAGATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CAA 90 bp AGACAAATGAGCATGGCCGTGTTCCTACAAAGCTGGCTACAAAGTCAGCTGCAGAAGGCTAGAAGCAAATaGAGTTGCCTGTTCGTTCCT +
Preference number: 5 (lower is better)
Translates to: RQMSMAVFLQSWLQSQLQKARSK*SCLFVP
Trigger: AGGAACGAACAGGCAACTCAATTTGCTTCTAGCCTT...CTGCAGCTGACTTTGTAGCCAGCTTTGTAGGAACACGGCCATGCTCATTTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS CCA 90 bp GAAACGATGAGATGGTATTTGAAGGCAGCAGGTTTCCAGATGAGCTaGACAAGCATGTTCATTGAGTCATGGGACCTGATGACACAGTTG +
Preference number: 5 (lower is better)
Translates to: ETMRWYLKAAGFQMS*TSMFIESWDLMTQL
Trigger: CAACTGTGTCATCAGGTCCCATGACTCAATGAACATGCTTGTCCAGCTCATCTGGAAACCTGCTGCCTTCAAATACCATCTCATCGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472125.5
ENST00000643535.1
CDS-3UTR CAA 90 bp CTCTGCCAACAGGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCACATGGCTAATGGTTTaGCCATATCCTCCCATGGGA +
Preference number: 5 (lower is better)
Translates to: LCQQEWNLKVLSSHFSICTWLMV*PYPPMG
Trigger: TCCCATGGGAGGATATGGCAAAACCATTAGCCATGT...GCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCATTCCTGTTGGCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR CAA 90 bp GAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACAGACTCCAGTTTCAACTGTTaGGTTCCTTTGGCTGTTTTG +
Preference number: 5 (lower is better)
Translates to: EFEGAIIALFHLLATRTDSSFNC*VPLAVL
Trigger: CAAAACAGCCAAAGGAACCAAACAGTTGAAACTGGA...GTCTGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR CAA 90 bp ATTGAGTTGCCTGTTCGTTCCTTCATATATGTCTCCTCCTCTGCCAACAGGAATTGTGCACATCCCCTTTaGGCAAGGGGACATACTCTT +
Preference number: 5 (lower is better)
Translates to: IELPVRSFIYVSSSANRNCAHPL*ARGHTL
Trigger: AAGAGTATGTCCCCTTGCCAAAAGGGGATGTGCACA...ATTCCTGTTGGCAGAGGAGGAGACATATATGAAGGAACGAACAGGCAACTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000643535.1
ENST00000646581.1
CDS-3UTR CAA 90 bp CGCCAGAATCTTCCCAACCTCATGAATCTCATCGCCACCATCTTTGTCTTTGCAATCTCCCCTCGAAGTTaGTCTGTGATTTCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: RQNLPNLMNLIATIFVFAISPRS*SVISVF
Trigger: GAAGACAGAAATCACAGACAAACTTCGAGGGGAGAT...TGCAAAGACAAAGATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000643535.1
ENST00000646581.1
CDS-3UTR CAA 90 bp CTTCCCAACCTCATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTGGTCATCATCTCCCCTCGAAGTTaGTCTGTGATTTCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: LPNLMNLIATIFVFAVVIISPRS*SVISVF
Trigger: GAAGACAGAAATCACAGACAAACTTCGAGGGGAGAT...GATGACCACTGCAAAGACAAAGATGGTGGCGATGAGATTCATGAGGTTGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR CAA 90 bp ATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGCCACACGCACACCCTGGTCGATGTACTaGTTCACCACCTTATTAATC +
Preference number: 5 (lower is better)
Translates to: MEFEGAIIALFHLLATRTPWSMY*FTTLLI
Trigger: GATTAATAAGGTGGTGAACAAGTACATCGACCAGGG...TGTGCGTGTGGCCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CAA 90 bp TGCCAACAGGAATGGAATTTGAAGGTGCTATCATCGCACTTTTCCATCTGCTGGTCATCGCCACCATCTTaGTCTTTGCAGTGGTCATCT +
Preference number: 5 (lower is better)
Translates to: CQQEWNLKVLSSHFSICWSSPPS*SLQWSS
Trigger: AGATGACCACTGCAAAGACAAAGATGGTGGCGATGA...CCAGCAGATGGAAAAGTGCGATGATAGCACCTTCAAATTCCATTCCTGTTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CAA 90 bp CCAGAATCTTCCCAACCTCATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTTCATCGCCACCATCTTaGTCTTTGCAGTGGTCATCT +
Preference number: 5 (lower is better)
Translates to: PESSQPHESHRHHLCLCSSSPPS*SLQWSS
Trigger: AGATGACCACTGCAAAGACAAAGATGGTGGCGATGA...ACTGCAAAGACAAAGATGGTGGCGATGAGATTCATGAGGTTGGGAAGATTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CAA 90 bp GAATCTCATCGCCACCATCTTTGTCTTTGCAGTGGTCATCTATTTCCAGGTGTGTCATCGCCACCATCTTaGTCTTTGCAGTGGTCATCT +
Preference number: 5 (lower is better)
Translates to: ESHRHHLCLCSGHLFPGVSSPPS*SLQWSS
Trigger: AGATGACCACTGCAAAGACAAAGATGGTGGCGATGA...CACACCTGGAAATAGATGACCACTGCAAAGACAAAGATGGTGGCGATGAGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CAA 90 bp ACCCCAGGGAGTTTCCATGGTCTGGATTTAAGTTTCAGAATGCCTTGTGTGCAGAAGGCTAGAAGCAAATaGAGTTGCCTGTTCGTTCCT +
Preference number: 5 (lower is better)
Translates to: TPGSFHGLDLSFRMPCVQKARSK*SCLFVP
Trigger: AGGAACGAACAGGCAACTCAATTTGCTTCTAGCCTT...CTGCACACAAGGCATTCTGAAACTTAAATCCAGACCATGGAAACTCCCTGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CAA 90 bp CTCATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTGGTCATCTATTTCCAGGATACAGCTGTACCCTaGGAGATGGAGCAGTTAGGT +
Preference number: 5 (lower is better)
Translates to: LMNLIATIFVFAVVIYFQDTAVP*EMEQLG
Trigger: ACCTAACTGCTCCATCTCCAAGGGTACAGCTGTATC...CTGGAAATAGATGACCACTGCAAAGACAAAGATGGTGGCGATGAGATTCATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS CCA 90 bp GAAACGATGAGATGGTATTTGAAGGCAGCAGGTTTCCAGATGAGCTaGACAAGCATGTTCATTGAGTCATGGGACCTGTTTCATTTCCTG +
Preference number: 5 (lower is better)
Translates to: ETMRWYLKAAGFQMS*TSMFIESWDLFHFL
Trigger: CAGGAAATGAAACAGGTCCCATGACTCAATGAACATGCTTGTCCAGCTCATCTGGAAACCTGCTGCCTTCAAATACCATCTCATCGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS-3UTR CAA 90 bp TTTTATTTGTCTGCTAAGAAGGCTAGAAGCAAATTGAGTTGCCTGTTCGTTCCTGCCTCCTCACTGATGTaGATTCCTTCCGTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: FYLSAKKARSKLSCLFVPASSLM*IPSVWA
Trigger: TGCCCAGACGGAAGGAATCAACATCAGTGAGGAGGC...AGGAACGAACAGGCAACTCAATTTGCTTCTAGCCTTCTTAGCAGACAAATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS-3UTR CAA 90 bp ATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTGGTCATCTATTTCCAGGTGTCATCGCCACCATCTTaGTCTTTGCAGTGGTCATCT +
Preference number: 5 (lower is better)
Translates to: MNLIATIFVFAVVIYFQVSSPPS*SLQWSS
Trigger: AGATGACCACTGCAAAGACAAAGATGGTGGCGATGA...CACCTGGAAATAGATGACCACTGCAAAGACAAAGATGGTGGCGATGAGATTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CAA 90 bp TTTTATTTGTCTGCTAAGAAGGCTAGAAGCAAATTGAGTTGCCTGTTCGTTCCTCCTCTGATGACACAGTaGCCTCGGTTGGATGCAAAG +
Preference number: 5 (lower is better)
Translates to: FYLSAKKARSKLSCLFVPPLMTQ*PRLDAK
Trigger: CTTTGCATCCAACCGAGGCAACTGTGTCATCAGAGG...AGGAACGAACAGGCAACTCAATTTGCTTCTAGCCTTCTTAGCAGACAAATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CAA 90 bp AAGCAAATTGAGTTGCCTGTTCGTTCCTTCATATATGTCTCCTCCTCTGCCAACAAGGCTAGAAGCAAATaGAGTTGCCTGTTCGTTCCT +
Preference number: 5 (lower is better)
Translates to: KQIELPVRSFIYVSSSANKARSK*SCLFVP
Trigger: AGGAACGAACAGGCAACTCAATTTGCTTCTAGCCTT...GTTGGCAGAGGAGGAGACATATATGAAGGAACGAACAGGCAACTCAATTTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS-3UTR CAA 90 bp CATGAATCTCATCGCCACCATCTTTGTCTTTGCAGTGGTCATCTATTTCCAGGTAAGGCTAGAAGCAAATaGAGTTGCCTGTTCGTTCCT +
Preference number: 5 (lower is better)
Translates to: HESHRHHLCLCSGHLFPGKARSK*SCLFVP
Trigger: AGGAACGAACAGGCAACTCAATTTGCTTCTAGCCTT...ACCTGGAAATAGATGACCACTGCAAAGACAAAGATGGTGGCGATGAGATTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000464873.5
ENST00000585057.5
ENST00000645975.1
ENST00000646581.1
CDS CCA 90 bp TTCAACTGTTTGGTTCCTTTGGCTGTTTTGAGTCCTATGATCACATaGCTAATGGTTTTGCCATATCCTCCCATGGGATTCTCTGTCTCA +
Preference number: 5 (lower is better)
Translates to: FNCLVPLAVLSPMIT*LMVLPYPPMGFSVS
Trigger: TGAGACAGAGAATCCCATGGGAGGATATGGCAAAACCATTAGCCATGTGATCATAGGACTCAAAACAGCCAAAGGAACCAAACAGTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000464873.5
ENST00000643444.2
ENST00000646581.1
CDS-3UTR CAA 90 bp AAGAAGGCTAGAAGCAAATTGAGTTGCCTGTTCGTTCCTTCATATATGTCTCCTCCCTGGTCGATGTACTaGTTCACCACCTTATTAATC +
Preference number: 5 (lower is better)
Translates to: KKARSKLSCLFVPSYMSPPWSMY*FTTLLI
Trigger: GATTAATAAGGTGGTGAACAAGTACATCGACCAGGG...AGGAGACATATATGAAGGAACGAACAGGCAACTCAATTTGCTTCTAGCCTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000464873.5
ENST00000472125.5
ENST00000585057.5
ENST00000643535.1
ENST00000645975.1
ENST00000646581.1
CDS TCA 90 bp ATAAATGAGATCTTTAATCATTTAATAACCTGCAGGGATAGTTTATaGGGGTGTCGGCTTGGATTGCAGAGTACACAAGTTACATTGAGT +
Preference number: 5 (lower is better)
Translates to: INEIFNHLITCRDSL*GCRLGLQSTQVTLS
Trigger: ACTCAATGTAACTTGTGTACTCTGCAATCCAAGCCGACACCCTCATAAACTATCCCTGCAGGTTATTAAATGATTAAAGATCTCATTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS GCA 72 bp CAGCGCCCGAGGCCGAGCCCGAGCCCGGCGAGCCACTaGTTCAGGTCACGCTGGTCGACTGCCCCGGGCACG +
Preference number: 6 (lower is better)
Translates to: QRPRPSPSPASH*FRSRWSTAPGT
Trigger: CGTGCCCGGGGCAGTCGACCAGCGTGACCTGAAGCAGTGGCTCGCCGGGCTCGGGCTCGGCCTCGGGCGCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS GCA 72 bp TCTCGGTGCCGCTGCCCGCGCGCCTGCGGTCGTCTTTaGCCGAGTTCCAGGCAGCGCCCGAGGCCGAGCCCG +
Preference number: 6 (lower is better)
Translates to: SRCRCPRACGRL*PSSRQRPRPSP
Trigger: CGGGCTCGGCCTCGGGCGCTGCCTGGAACTCGGGCAAAGACGACCGCAGGCGCGCGGGCAGCGGCACCGAGA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS CAA 72 bp TTCTCGGTGCCGCTGCCCGCGCGCCTGCGGTCGTCTTaGCCCGAGTTCCAGGCAGCGCCCGAGGCCGAGCCC +
Preference number: 6 (lower is better)
Translates to: FSVPLPARLRSS*PEFQAAPEAEP
Trigger: GGGCTCGGCCTCGGGCGCTGCCTGGAACTCGGGCAAAGACGACCGCAGGCGCGCGGGCAGCGGCACCGAGAA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS CAA 90 bp TTCTCGTGCTTCTCGGTGCCGCTGCCCGCGCGCCTGCGGTCGTCTTaGCCCGAGTTCCAGGCAGCGCCCGAGGCCGAGCCCGAGCCCGGC +
Preference number: 6 (lower is better)
Translates to: FSCFSVPLPARLRSS*PEFQAAPEAEPEPG
Trigger: GCCGGGCTCGGGCTCGGCCTCGGGCGCTGCCTGGAACTCGGGCAAAGACGACCGCAGGCGCGCGGGCAGCGGCACCGAGAAGCACGAGAA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS GCA 72 bp CGCGAGCGCGGCATCACGCTCGATCTGGGCTTCTCGTaGTTCTCGGTGCCGCTGCCCGCGCGCCTGCGGTCG +
Preference number: 6 (lower is better)
Translates to: RERGITLDLGFS*FSVPLPARLRS
Trigger: CGACCGCAGGCGCGCGGGCAGCGGCACCGAGAAGCACGAGAAGCCCAGATCGAGCGTGATGCCGCGCTCGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS TCA 72 bp ACCACCCACTCGGAGCACGGCGCTCGGCTGTGCCCGTaGGCCTCAGGAGGGCGGAAGCTTCCGGGCCGGAAC +
Preference number: 6 (lower is better)
Translates to: TTHSEHGARLCP*ASGGRKLPGRN
Trigger: GTTCCGGCCCGGAAGCTTCCGCCCTCCTGAGGCTCACGGGCACAGCCGAGCGCCGTGCTCCGAGTGGGTGGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464873.5
CDS TCA 72 bp ACCACCCAGTCGGAGCACGGCGCTCGGCTGTGCCCGTaGGCCTCAGGAGGGCGGAAGCTTCCGGGCCGGAAC +
Preference number: 6 (lower is better)
Translates to: TTQSEHGARLCP*ASGGRKLPGRN
Trigger: GTTCCGGCCCGGAAGCTTCCGCCCTCCTGAGGCTCACGGGCACAGCCGAGCGCCGTGCTCCGACTGGGTGGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646581.1
CDS GCA 72 bp CGCGCGTTCTCCTGGCCCACAAGCCCTGAGGCCGCCTaGTTGGCCAAGCCGCTCTCGTCCAGCCCCAGCCCT +
Preference number: 6 (lower is better)
Translates to: RAFSWPTSPEAA*LAKPLSSSPSP
Trigger: AGGGCTGGGGCTGGACGAGAGCGGCTTGGCCAAGCAGGCGGCCTCAGGGCTTGTGGGCCAGGAGAACGCGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS GCA 72 bp GCTTCTCGTGCTTCTCGGTGCCGCTGCCCGCGCGCCTaGGGTCGTCTTTGCCCGAGTTCCAGGCAGCGCCCG +
Preference number: 6 (lower is better)
Translates to: ASRASRCRCPRA*GRLCPSSRQRP
Trigger: CGGGCGCTGCCTGGAACTCGGGCAAAGACGACCGCAGGCGCGCGGGCAGCGGCACCGAGAAGCACGAGAAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS GCA 72 bp ACTGAGACCTGGGTTGGTGGGCAGGGAGCCAACGCCTaGCCAGCACTGCCGGCCCGGCACCCTCCAGGAGGC +
Preference number: 6 (lower is better)
Translates to: TETWVGGQGANA*PALPARHPPGG
Trigger: GCCTCCTGGAGGGTGCCGGGCCGGCAGTGCTGGGCAGGCGTTGGCTCCCTGCCCACCAACCCAGGTCTCAGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS CCA 72 bp AGCCCGAGCCCGGCGAGCCACTGCTTCAGGTCACGCTaGTCGACTGCCCCGGGCACGCCTCCCTCATCCGGA +
Preference number: 6 (lower is better)
Translates to: SPSPASHCFRSR*STAPGTPPSSG
Trigger: TCCGGATGAGGGAGGCGTGCCCGGGGCAGTCGACCAGCGTGACCTGAAGCAGTGGCTCGCCGGGCTCGGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS CCA 72 bp AGCCGCAGAGCCGCGAGCGCGGCATCACGCTCGATCTaGGCTTCTCGTGCTTCTCGGTGCCGCTGCCCGCGC +
Preference number: 6 (lower is better)
Translates to: SRRAASAASRSI*ASRASRCRCPR
Trigger: GCGCGGGCAGCGGCACCGAGAAGCACGAGAAGCCCAGATCGAGCGTGATGCCGCGCTCGCGGCTCTGCGGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS CAA 90 bp GCCTCTCGCGCGTTCTCCTGGCCCACAAGCCCTGAGGCCGCCTGCTaGGCCAAGCCGCTCTCGTCCAGCCCCAGCCCTTTCACGTGGCTG +
Preference number: 6 (lower is better)
Translates to: ASRAFSWPTSPEAAC*AKPLSSSPSPFTWL
Trigger: CAGCCACGTGAAAGGGCTGGGGCTGGACGAGAGCGGCTTGGCCAAGCAGGCGGCCTCAGGGCTTGTGGGCCAGGAGAACGCGCGAGAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS GCA 72 bp CCCGGCGAGCCACTGCTTCAGGTCACGCTGGTCGACTaGCCCGGGCACGCCTCCCTCATCCGGACCATCATC +
Preference number: 6 (lower is better)
Translates to: PGEPLLQVTLVD*PGHASLIRTII
Trigger: GATGATGGTCCGGATGAGGGAGGCGTGCCCGGGGCAGTCGACCAGCGTGACCTGAAGCAGTGGCTCGCCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS GCA 72 bp CGCTCGATCTGGGCTTCTCGTGCTTCTCGGTGCCGCTaGCCGCGCGCCTGCGGTCGTCTTTGCCCGAGTTCC +
Preference number: 6 (lower is better)
Translates to: RSIWASRASRCR*PRACGRLCPSS
Trigger: GGAACTCGGGCAAAGACGACCGCAGGCGCGCGGGCAGCGGCACCGAGAAGCACGAGAAGCCCAGATCGAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS GCA 72 bp GCATCACGCTCGATCTGGGCTTCTCGTGCTTCTCGGTaGCGCTGCCCGCGCGCCTGCGGTCGTCTTTGCCCG +
Preference number: 6 (lower is better)
Translates to: ASRSIWASRASR*RCPRACGRLCP
Trigger: CGGGCAAAGACGACCGCAGGCGCGCGGGCAGCGGCACCGAGAAGCACGAGAAGCCCAGATCGAGCGTGATGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS TCA 72 bp ACATGCCTCTCGCGCGTTCTCCTGGCCCACAAGCCCTaGGGCCGCCTGCTTGGCCAAGCCGCTCTCGTCCAG +
Preference number: 6 (lower is better)
Translates to: TCLSRVLLAHKP*GRLLGQAALVQ
Trigger: CTGGACGAGAGCGGCTTGGCCAAGCAGGCGGCCTCAGGGCTTGTGGGCCAGGAGAACGCGCGAGAGGCATGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS GCA 72 bp GTCAGCTCTCCAGGCTGGGACCCTGCGGGCAGGAGCTaGAGGGGGAGCCCAGTCTCTGATGATCGCGGTTGG +
Preference number: 6 (lower is better)
Translates to: VSSPGWDPAGRS*RGSPVSDDRGW
Trigger: CCAACCGCGATCATCAGAGACTGGGCTCCCCCTGCAGCTCCTGCCCGCAGGGTCCCAGCCTGGAGAGCTGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS CCA 72 bp GCCCCGGCGGGCCCAGGGTACCAGCTCACCTCAGTGTaGTCTTGGTGCCAATCTCCCCCAGGTGGTTCAGTG +
Preference number: 6 (lower is better)
Translates to: APAGPGYQLTSV*SWCQSPPGGSV
Trigger: CACTGAACCACCTGGGGGAGATTGGCACCAAGACCACACTGAGGTGAGCTGGTACCCTGGGCCCGCCGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS CAA 90 bp GGAGGCCCCGGCGGGCCCAGGGTACCAGCTCACCTCAGTGTGGTCTaGGTGCCAATCTCCCCCAGGTGGTTCAGTGCCTCCTCACTGATG +
Preference number: 6 (lower is better)
Translates to: GGPGGPRVPAHLSVV*VPISPRWFSASSLM
Trigger: CATCAGTGAGGAGGCACTGAACCACCTGGGGGAGATTGGCACCAAGACCACACTGAGGTGAGCTGGTACCCTGGGCCCGCCGGGGCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS GCA 72 bp CCAAGGAGGTATGCAGCTTCCCAAGTGGCTCACTCTTaGCTCCATGTCCTCCCGTCCCCTGTCCCCAGGCAG +
Preference number: 6 (lower is better)
Translates to: PRRYAASQVAHS*LHVLPSPVPRQ
Trigger: CTGCCTGGGGACAGGGGACGGGAGGACATGGAGGCAAGAGTGAGCCACTTGGGAAGCTGCATACCTCCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS GCA 72 bp GGCCCAGGGTACCAGCTCACCTCAGTGTGGTCTTGGTaGCAATCTCCCCCAGGTGGTTCAGTGCCTCCTCAC +
Preference number: 6 (lower is better)
Translates to: GPGYQLTSVWSW*QSPPGGSVPPH
Trigger: GTGAGGAGGCACTGAACCACCTGGGGGAGATTGGCACCAAGACCACACTGAGGTGAGCTGGTACCCTGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS CCA 72 bp AGCTGCAGGGGGAGCCCAGTCTCTGATGATCGCGGTTaGGCTTGGGGGACAGCACATTGGCTGCCCACAGAT +
Preference number: 6 (lower is better)
Translates to: SCRGSPVSDDRG*AWGTAHWLPTD
Trigger: ATCTGTGGGCAGCCAATGTGCTGTCCCCCAAGCCCAACCGCGATCATCAGAGACTGGGCTCCCCCTGCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS CCA 72 bp GTGGCTGGTGCCCAAGGAGGTATGCAGCTTCCCAAGTaGCTCACTCTTGCCTCCATGTCCTCCCGTCCCCTG +
Preference number: 6 (lower is better)
Translates to: VAGAQGGMQLPK*LTLASMSSRPL
Trigger: CAGGGGACGGGAGGACATGGAGGCAAGAGTGAGCCACTTGGGAAGCTGCATACCTCCTTGGGCACCAGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS CCA 72 bp AAGTGCCCTGGCACCCATCGCGCCAGGAAGAGCGGATaGATAGAGTCCCATGCCCTAGGAAGGGACCTGCCT +
Preference number: 6 (lower is better)
Translates to: KCPGTHRARKSG*IESHALGRDLP
Trigger: AGGCAGGTCCCTTCCTAGGGCATGGGACTCTATCCATCCGCTCTTCCTGGCGCGATGGGTGCCAGGGCACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS TCA 72 bp AGGAGGAGCCACGTGAGAGAGAAACCCTGCCTACGGTaGCCTCCAGTTCCTAGACCACCCACTCGGAGCACG +
Preference number: 6 (lower is better)
Translates to: RRSHVREKPCLR*PPVPRPPTRST
Trigger: CGTGCTCCGAGTGGGTGGTCTAGGAACTGGAGGTCACCGTAGGCAGGGTTTCTCTCTCACGTGGCTCCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464873.5
CDS CCA 72 bp AGGGGGAGCCCAGTCTCTGATGATCGCGGTTGGGCTTaGGGGACAGCACATTGGCTGCCCACAGATGGGAAA +
Preference number: 6 (lower is better)
Translates to: RGSPVSDDRGWA*GTAHWLPTDGK
Trigger: TTTCCCATCTGTGGGCAGCCAATGTGCTGTCCCCCAAGCCCAACCGCGATCATCAGAGACTGGGCTCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS GCA 72 bp CCCAGCCCTTTCACGTGGCTGTGGGAGGCGATGCGCTaGGTCTTCGTAGTGCTCTTCACCTCCTCAATCTTC +
Preference number: 6 (lower is better)
Translates to: PSPFTWLWEAMR*VFVVLFTSSIF
Trigger: GAAGATTGAGGAGGTGAAGAGCACTACGAAGACGCAGCGCATCGCCTCCCACAGCCACGTGAAAGGGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS CAA 90 bp CAGCTGCAGACCAGGTTGTCCTATGGGCCTTACCTCAGTGTGGTCTaGGTGCCAATCTCCCCCAGGTGGTTCAGTGCCTCCTCACTGATG +
Preference number: 6 (lower is better)
Translates to: QLQTRLSYGPYLSVV*VPISPRWFSASSLM
Trigger: CATCAGTGAGGAGGCACTGAACCACCTGGGGGAGATTGGCACCAAGACCACACTGAGGTAAGGCCCATAGGACAACCTGGTCTGCAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS CAA 90 bp CAAGAAGAGGCTGACGCTTGTTGCAGTTTGAAGATCTTGGTAGAGTaGGAGGGGAGGCAGGCTGGCGGCGGGGATGCTGTAACACGGTGG +
Preference number: 6 (lower is better)
Translates to: QEEADACCSLKILVE*EGRQAGGGDAVTRW
Trigger: CCACCGTGTTACAGCATCCCCGCCGCCAGCCTGCCTCCCCTCCAACTCTACCAAGATCTTCAAACTGCAACAAGCGTCAGCCTCTTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS GCA 72 bp GGTTGTCCTATGGGCCTTACCTCAGTGTGGTCTTGGTaGCAATCTCCCCCAGGTGGTTCAGTGCCTCCTCAC +
Preference number: 6 (lower is better)
Translates to: GCPMGLTSVWSW*QSPPGGSVPPH
Trigger: GTGAGGAGGCACTGAACCACCTGGGGGAGATTGGCACCAAGACCACACTGAGGTAAGGCCCATAGGACAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS GCA 72 bp CGGCACCCTCCAGGAGGCATGTGCGGCCCTGCAGTATaGATGAATAGCATCACGGCCAGTGTGCTGTATTCA +
Preference number: 6 (lower is better)
Translates to: RHPPGGMCGPAV*MNSITASVLYS
Trigger: TGAATACAGCACACTGGCCGTGATGCTATTCATGCATACTGCAGGGCCGCACATGCCTCCTGGAGGGTGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS GCA 72 bp CCAGGGTCAAAGCACTCTCCACCAGAGGGGAGCATCTaGTGCAGGACATGGGGACTTCACCCTTACTCTAGC +
Preference number: 6 (lower is better)
Translates to: PGSKHSPPEGSI*CRTWGLHPYSS
Trigger: GCTAGAGTAAGGGTGAAGTCCCCATGTCCTGCAGCAGATGCTCCCCTCTGGTGGAGAGTGCTTTGACCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS GCA 72 bp CACTGGCACCAGGAGCAGAGCCCAGTGCTGGGCTTGTaGCAGCTGCTACGAACACAGAAAAGGGGAGACAAA +
Preference number: 6 (lower is better)
Translates to: HWHQEQSPVLGL*QLLRTQKRGDK
Trigger: TTTGTCTCCCCTTTTCTGTGTTCGTAGCAGCTGGCACAAGCCCAGCACTGGGCTCTGCTCCTGGTGCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS CCA 72 bp GCCCCAGGCTCCAGTAAAAATGCTGAGGTTATCGCCTaGGCCAGCGGGAACAAAGCCACGAGTCCTGAGAGA +
Preference number: 6 (lower is better)
Translates to: APGSSKNAEVIA*ASGNKATSPER
Trigger: TCTCTCAGGACTCGTGGCTTTGTTCCCGCTGGCCCAGGCGATAACCTCAGCATTTTTACTGGAGCCTGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS CCA 72 bp TGCAGACCAGGTTGTCCTATGGGCCTTACCTCAGTGTaGTCTTGGTGCCAATCTCCCCCAGGTGGTTCAGTG +
Preference number: 6 (lower is better)
Translates to: CRPGCPMGLTSV*SWCQSPPGGSV
Trigger: CACTGAACCACCTGGGGGAGATTGGCACCAAGACCACACTGAGGTAAGGCCCATAGGACAACCTGGTCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS CCA 72 bp GATTTCTCACTGTGCAGCATAAGAGAAACTGAGACCTaGGTTGGTGGGCAGGGAGCCAACGCCTGCCCAGCA +
Preference number: 6 (lower is better)
Translates to: DFSLCSIRETET*VGGQGANACPA
Trigger: TGCTGGGCAGGCGTTGGCTCCCTGCCCACCAACCCAGGTCTCAGTTTCTCTTATGCTGCACAGTGAGAAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS TCA 72 bp ACCCTCCAGGAGGCATGTGCGGCCCTGCAGTATGCATaGATAGCATCACGGCCAGTGTGCTGTATTCAACTG +
Preference number: 6 (lower is better)
Translates to: TLQEACAALQYA*IASRPVCCIQL
Trigger: CAGTTGAATACAGCACACTGGCCGTGATGCTATTCATGCATACTGCAGGGCCGCACATGCCTCCTGGAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS CAA 90 bp GCAAGTCACTGTCCTAGAAGCACAGTACAGAACATTCCAGACTGTTaGGGCCAGGAGCTCTGGGTTCGAATGGCGGCAGCAAGGGTGAAC +
Preference number: 6 (lower is better)
Translates to: ASHCPRSTVQNIPDC*GQELWVRMAAARVN
Trigger: GTTCACCCTTGCTGCCGCCATTCGAACCCAGAGCTCCTGGCCCAAACAGTCTGGAATGTTCTGTACTGTGCTTCTAGGACAGTGACTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000478243.1
ENST00000582176.1
ENST00000643698.1
ENST00000643930.1
CDS CAA 90 bp GCCGTGTTCCTACAAAGCTGGCTACAAAGTCAGCTGCAGACCAGGTaGTCCTATGGGCCTTACCTCAGTGTGGTCTTGGTGCCAATCTCC +
Preference number: 6 (lower is better)
Translates to: AVFLQSWLQSQLQTR*SYGPYLSVVLVPIS
Trigger: GGAGATTGGCACCAAGACCACACTGAGGTAAGGCCCATAGGACAACCTGGTCTGCAGCTGACTTTGTAGCCAGCTTTGTAGGAACACGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS GCA 72 bp CAGAGCCAGAGCTGTCTTGCCAGTTCCAGGAGGTCCTaGCAACAAGACAGCTCTTCCAGCCATTTTCTTGCT +
Preference number: 6 (lower is better)
Translates to: QSQSCLASSRRS*QQDSSSSHFLA
Trigger: AGCAAGAAAATGGCTGGAAGAGCTGTCTTGTTGGCAGGACCTCCTGGAACTGGCAAGACAGCTCTGGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000464873.5
ENST00000643444.2
ENST00000646581.1
CDS GCA 72 bp TGGCCGTGTTCCTACAAAGCTGGCTACAAAGTCAGCTaGAGACCAGGTTGTCCTATGGGCCTTACCTCAGTG +
Preference number: 6 (lower is better)
Translates to: WPCSYKAGYKVS*RPGCPMGLTSV
Trigger: CACTGAGGTAAGGCCCATAGGACAACCTGGTCTGCAGCTGACTTTGTAGCCAGCTTTGTAGGAACACGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS GCA 72 bp AACCATCAGATAGATCCTCTGCATTTGAAACTCAAGTaGCCTGGCACCCATCGCGCCAGGAAGAGCGGATGG +
Preference number: 6 (lower is better)
Translates to: NHQIDPLHLKLK*PGTHRARKSGW
Trigger: CCATCCGCTCTTCCTGGCGCGATGGGTGCCAGGGCACTTGAGTTTCAAATGCAGAGGATCTATCTGATGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS CCA 72 bp GTCCTAGAAGCACAGTACAGAACATTCCAGACTGTTTaGGCCAGGAGCTCTGGGTTCGAATGGCGGCAGCAA +
Preference number: 6 (lower is better)
Translates to: VLEAQYRTFQTV*ARSSGFEWRQQ
Trigger: TTGCTGCCGCCATTCGAACCCAGAGCTCCTGGCCCAAACAGTCTGGAATGTTCTGTACTGTGCTTCTAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000478243.1
ENST00000582176.1
ENST00000643698.1
ENST00000643930.1
CDS CCA 72 bp CTGGCTACAAAGTCAGCTGCAGACCAGGTTGTCCTATaGGCCTTACCTCAGTGTGGTCTTGGTGCCAATCTC +
Preference number: 6 (lower is better)
Translates to: LATKSAADQVVL*ALPQCGLGANL
Trigger: GAGATTGGCACCAAGACCACACTGAGGTAAGGCCCATAGGACAACCTGGTCTGCAGCTGACTTTGTAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS CCA 72 bp TCACGGCCAGTGTGCTGTATTCAACTGACTCAAGTGTaGCTGGTGCCCAAGGAGGTATGCAGCTTCCCAAGT +
Preference number: 6 (lower is better)
Translates to: SRPVCCIQLTQV*LVPKEVCSFPS
Trigger: ACTTGGGAAGCTGCATACCTCCTTGGGCACCAGCCACACTTGAGTCAGTTGAATACAGCACACTGGCCGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS CAA 72 bp CTGCTTACTCTCCACATAGCCACAGGACCCTCGTTCTaGGAGCCTCCAACACTGGCTATTGCGAAGCTGTTG +
Preference number: 6 (lower is better)
Translates to: LLTLHIATGPSF*EPPTLAIAKLL
Trigger: CAACAGCTTCGCAATAGCCAGTGTTGGAGGCTCCAAGAACGAGGGTCCTGTGGCTATGTGGAGAGTAAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478243.1
ENST00000643930.1
CDS CAA 72 bp TGTCCTAGAAGCACAGTACAGAACATTCCAGACTGTTaGGGCCAGGAGCTCTGGGTTCGAATGGCGGCAGCA +
Preference number: 6 (lower is better)
Translates to: CPRSTVQNIPDC*GQELWVRMAAA
Trigger: TGCTGCCGCCATTCGAACCCAGAGCTCCTGGCCCAAACAGTCTGGAATGTTCTGTACTGTGCTTCTAGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000478243.1
ENST00000582176.1
ENST00000643698.1
ENST00000643930.1
CDS CAA 90 bp CTAATCTATCAAGAAGAGGCTGACGCTTGTTGCAGTTTGAAGATCTaGGTAGAGTTGGAGGGGAGGCAGGCTGGCGGCGGGGATGCTGTA +
Preference number: 6 (lower is better)
Translates to: LIYQEEADACCSLKI*VELEGRQAGGGDAV
Trigger: TACAGCATCCCCGCCGCCAGCCTGCCTCCCCTCCAACTCTACCAAGATCTTCAAACTGCAACAAGCGTCAGCCTCTTCTTGATAGATTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS CAA 90 bp GGGAGATATCTAATCTATCAAGAAGAGGCTGACGCTTGTTGCAGTTaGAAGATCTTGGTAGAGTTGGAGGGGAGGCAGGCTGGCGGCGGG +
Preference number: 6 (lower is better)
Translates to: GRYLIYQEEADACCS*KILVELEGRQAGGG
Trigger: CCCGCCGCCAGCCTGCCTCCCCTCCAACTCTACCAAGATCTTCAAACTGCAACAAGCGTCAGCCTCTTCTTGATAGATTAGATATCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS CAA 90 bp ATGAGTCAGGCCACTGTGAAGGGACATGCTCTGCCGGTCCTGTGTTaGAGCCGCTGGAGAACAATTAGGAGAACTGTCTATGTCTGCGCT +
Preference number: 6 (lower is better)
Translates to: MSQATVKGHALPVLC*SRWRTIRRTVYVCA
Trigger: AGCGCAGACATAGACAGTTCTCCTAATTGTTCTCCAGCGGCTCAAACACAGGACCGGCAGAGCATGTCCCTTCACAGTGGCCTGACTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS CAA 90 bp TGCTCTTTCTCAATGCTGTCCTTCCCGTTGATTTTAGCAAGCAAGTaGGCCGGGGTCAGCAGCTGCACTGAGTACCTAGAGTGGACAGGG +
Preference number: 6 (lower is better)
Translates to: CSFSMLSFPLILASK*AGVSSCTEYLEWTG
Trigger: CCCTGTCCACTCTAGGTACTCAGTGCAGCTGCTGACCCCGGCCAACTTGCTTGCTAAAATCAACGGGAAGGACAGCATTGAGAAAGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS TCA 72 bp GCTTGCATTTCTGCCTTCAACCTCAGGAGCAAGAACTaGCTCAAGGGATGTAGGGAAGGGCTGAGGACTGTG +
Preference number: 6 (lower is better)
Translates to: ACISAFNLRSKN*LKGCREGLRTV
Trigger: CACAGTCCTCAGCCCTTCCCTACATCCCTTGAGTCAGTTCTTGCTCCTGAGGTTGAAGGCAGAAATGCAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS GCA 72 bp CTCAGTGCCTCTGATGACACAGTTGCCTCGGTTGGATaGAAAGATGACGATGGGAGCGATAGAAGACTCCAG +
Preference number: 6 (lower is better)
Translates to: LSASDDTVASVG*KDDDGSDRRLQ
Trigger: CTGGAGTCTTCTATCGCTCCCATCGTCATCTTTGCATCCAACCGAGGCAACTGTGTCATCAGAGGCACTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322623.10
ENST00000464873.5
ENST00000585057.5
ENST00000643444.2
ENST00000645975.1
ENST00000646581.1
CDS GCA 72 bp GTCATGGGACCTGATGACACAGTTGCCTCGGTTGGATaGAAAGATGACGATGGGAGCGATAGAAGACTCCAG +
Preference number: 6 (lower is better)
Translates to: VMGPDDTVASVG*KDDDGSDRRLQ
Trigger: CTGGAGTCTTCTATCGCTCCCATCGTCATCTTTGCATCCAACCGAGGCAACTGTGTCATCAGGTCCCATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472125.5
ENST00000643535.1
CDS CCA 72 bp AGGGGACATACTCTTCAGCTTCAAGGTCGAATTCTGTaGCATAGGTATCACACCTGCCCTGCCTCTTCACGG +
Preference number: 6 (lower is better)
Translates to: RGHTLQLQGRIL*HRYHTCPASSR
Trigger: CCGTGAAGAGGCAGGGCAGGTGTGATACCTATGCCACAGAATTCGACCTTGAAGCTGAAGAGTATGTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322623.10
ENST00000464873.5
ENST00000472125.5
ENST00000643444.2
ENST00000643535.1
ENST00000646581.1
CDS CCA 72 bp AAGGGACATGCTCTGCCGGTCCTGTGTTTGAGCCGCTaGAGAACAATTAGGAGAACTGTCTATGTCTGCGCT +
Preference number: 6 (lower is better)
Translates to: KGHALPVLCLSR*RTIRRTVYVCA
Trigger: AGCGCAGACATAGACAGTTCTCCTAATTGTTCTCCAGCGGCTCAAACACAGGACCGGCAGAGCATGTCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS CAA 72 bp CCCGGGACCAGCTCAGCAATGCCCTGGTCGATGTACTaGTTCACCACCTTATTAATCTCCCCTCGAAGTTTG +
Preference number: 6 (lower is better)
Translates to: PGTSSAMPWSMY*FTTLLISPRSL
Trigger: CAAACTTCGAGGGGAGATTAATAAGGTGGTGAACAAGTACATCGACCAGGGCATTGCTGAGCTGGTCCCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000322623.10
ENST00000464873.5
ENST00000472125.5
ENST00000478892.1
ENST00000643444.2
ENST00000643535.1
ENST00000646091.1
ENST00000646581.1
CDS CAA 72 bp TCAATGCTGTCCTTCCCGTTGATTTTAGCAAGCAAGTaGGCCGGGGTCAGCAGCTGCACTGAGTACCTCAGT +
Preference number: 6 (lower is better)
Translates to: SMLSFPLILASK*AGVSSCTEYLS
Trigger: ACTGAGGTACTCAGTGCAGCTGCTGACCCCGGCCAACTTGCTTGCTAAAATCAACGGGAAGGACAGCATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS CAA 72 bp CAGGACCCTCGTTCTTGGAGCCTCCAACACTGGCTATaGCGAAGCTGTTGTATGTTGTACGTAGAGGACCCT +
Preference number: 6 (lower is better)
Translates to: QDPRSWSLQHWL*RSCCMLYVEDP
Trigger: AGGGTCCTCTACGTACAACATACAACAGCTTCGCAATAGCCAGTGTTGGAGGCTCCAAGAACGAGGGTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478243.1
ENST00000643930.1
CDS CAA 72 bp CTACAAAGCTGGCTACAAAGTCAGCTGCAGACCAGGTaGTCCTATGGGCCTTACCTCAGTGTGGTCTTGGTG +
Preference number: 6 (lower is better)
Translates to: LQSWLQSQLQTR*SYGPYLSVVLV
Trigger: CACCAAGACCACACTGAGGTAAGGCCCATAGGACAACCTGGTCTGCAGCTGACTTTGTAGCCAGCTTTGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585057.5
ENST00000645975.1
CDS CAA 72 bp GCCACTGTGAAGGGACATGCTCTGCCGGTCCTGTGTTaGAGCCGCTGGAGAACAATTAGGAGAACTGTCTAT +
Preference number: 6 (lower is better)
Translates to: ATVKGHALPVLC*SRWRTIRRTVY
Trigger: ATAGACAGTTCTCCTAATTGTTCTCCAGCGGCTCAAACACAGGACCGGCAGAGCATGTCCCTTCACAGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS CAA 72 bp TCAATGCTGTCCTTCCCGTTGATTTTAGCAAGCAAGTaGGCCGGGGTCAGCAGCTGCACTGAGTACCTAGAG +
Preference number: 6 (lower is better)
Translates to: SMLSFPLILASK*AGVSSCTEYLE
Trigger: CTCTAGGTACTCAGTGCAGCTGCTGACCCCGGCCAACTTGCTTGCTAAAATCAACGGGAAGGACAGCATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS CAA 90 bp ATGCGCTGCGTCTTCGTAGTGCTCTTCACCTCCTCAATCTTCATTTaGCAGACGCCGGGAGCTAAAACCAGCGTGGAAAACCAGCAGCTA +
Preference number: 6 (lower is better)
Translates to: MRCVFVVLFTSSIFI*QTPGAKTSVENQQL
Trigger: TAGCTGCTGGTTTTCCACGCTGGTTTTAGCTCCCGGCGTCTGCAAAATGAAGATTGAGGAGGTGAAGAGCACTACGAAGACGCAGCGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS CAA 90 bp TGCTCTTTCTCAATGCTGTCCTTCCCGTTGATTTTAGCAAGCAAGTaGGCCGGGGTCAGCAGCTGCACTGAGTACCTCAGTGTGGTCTTG +
Preference number: 6 (lower is better)
Translates to: CSFSMLSFPLILASK*AGVSSCTEYLSVVL
Trigger: CAAGACCACACTGAGGTACTCAGTGCAGCTGCTGACCCCGGCCAACTTGCTTGCTAAAATCAACGGGAAGGACAGCATTGAGAAAGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000643444.2
ENST00000646091.1
CDS CAA 90 bp CTGGCTCTGCTGCTTACTCTCCACATAGCCACAGGACCCTCGTTCTaGGAGCCTCCAACACTGGCTATTGCGAAGCTGTTGTATGTTGTA +
Preference number: 6 (lower is better)
Translates to: LALLLTLHIATGPSF*EPPTLAIAKLLYVV
Trigger: TACAACATACAACAGCTTCGCAATAGCCAGTGTTGGAGGCTCCAAGAACGAGGGTCCTGTGGCTATGTGGAGAGTAAGCAGCAGAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478243.1
ENST00000643930.1
CDS CAA 90 bp TCACTGATCTCTTCGACATGCTCTTTCTCAATGCTGTCCTTCCCGTaGATTTTAGCAAGCAAGTTGGCCGGGGTCAGCAGCTGCACTGAG +
Preference number: 6 (lower is better)
Translates to: SLISSTCSFSMLSFP*ILASKLAGVSSCTE
Trigger: CTCAGTGCAGCTGCTGACCCCGGCCAACTTGCTTGCTAAAATCAACGGGAAGGACAGCATTGAGAAAGAGCATGTCGAAGAGATCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000582176.1
ENST00000643444.2
ENST00000643698.1
ENST00000646091.1
CDS TCA 72 bp TCTCTCACTAGAGAGAGCAGCAGGTCAGAGCAATCGTaGAAGCGTCTGTCTCAGGCTGCTCGAAAATGGACA +
Preference number: 6 (lower is better)
Translates to: SLTRESSRSEQS*KRLSQAARKWT
Trigger: TGTCCATTTTCGAGCAGCCTGAGACAGACGCTTTCACGATTGCTCTGACCTGCTGCTCTCTCTAGTGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS CCA 72 bp ACAAACAGCACACCCGGGACCAGCTCAGCAATGCCCTaGTCGATGTACTTGTTCACCACCTTATTAATCTCC +
Preference number: 6 (lower is better)
Translates to: TNSTPGTSSAMP*SMYLFTTLLIS
Trigger: GGAGATTAATAAGGTGGTGAACAAGTACATCGACCAGGGCATTGCTGAGCTGGTCCCGGGTGTGCTGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000322623.10
ENST00000464873.5
ENST00000472125.5
ENST00000478892.1
ENST00000585057.5
ENST00000643444.2
ENST00000643535.1
ENST00000645975.1
ENST00000646091.1
ENST00000646581.1
CDS CAA 72 bp ATGTCCTCAGTGCCTCTGATGACACAGTTGCCTCGGTaGGATGCAAAGATGACGATGGGAGCGATAGAAGAC +
Preference number: 6 (lower is better)
Translates to: MSSVPLMTQLPR*DAKMTMGAIED
Trigger: GTCTTCTATCGCTCCCATCGTCATCTTTGCATCCAACCGAGGCAACTGTGTCATCAGAGGCACTGAGGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322623.10
ENST00000464873.5
ENST00000585057.5
ENST00000643444.2
ENST00000645975.1
ENST00000646581.1
CDS CAA 72 bp ATCTCCCCCAGGTGGTTCAGTGCCTCCTCACTGATGTaGATTCCTTCCGTCTGGGCACGGATTTTAATGATC +
Preference number: 6 (lower is better)
Translates to: ISPRWFSASSLM*IPSVWARILMI
Trigger: GATCATTAAAATCCGTGCCCAGACGGAAGGAATCAACATCAGTGAGGAGGCACTGAACCACCTGGGGGAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000582176.1
ENST00000585057.5
ENST00000643444.2
ENST00000643698.1
ENST00000645975.1
ENST00000646091.1
CDS CAA 72 bp TCTTCGACATGCTCTTTCTCAATGCTGTCCTTCCCGTaGATTTTAGCAAGCAAGTTGGCCGGGGTCAGCAGC +
Preference number: 6 (lower is better)
Translates to: SSTCSFSMLSFP*ILASKLAGVSS
Trigger: GCTGCTGACCCCGGCCAACTTGCTTGCTAAAATCAACGGGAAGGACAGCATTGAGAAAGAGCATGTCGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000582176.1
ENST00000643444.2
ENST00000643698.1
ENST00000646091.1
CDS CAA 72 bp CCATCACCTAAGCCTCTGATGACACAGTTGCCTCGGTaGGATGCAAAGATGACGATGGGAGCGATAGAAGAC +
Preference number: 6 (lower is better)
Translates to: PSPKPLMTQLPR*DAKMTMGAIED
Trigger: GTCTTCTATCGCTCCCATCGTCATCTTTGCATCCAACCGAGGCAACTGTGTCATCAGAGGCTTAGGTGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478892.1
ENST00000646091.1
CDS CAA 90 bp GTTCCAGGAGGTCCTGCCAACAAGACAGCTCTTCCAGCCATTTTCTaGCTTTTGATTAATTCTACTATGACGCCACATGCCTCTCGCGCG +
Preference number: 6 (lower is better)
Translates to: VPGGPANKTALPAIF*LLINSTMTPHASRA
Trigger: CGCGCGAGAGGCATGTGGCGTCATAGTAGAATTAATCAAAAGCAAGAAAATGGCTGGAAGAGCTGTCTTGTTGGCAGGACCTCCTGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS CAA 90 bp AACAGCACACCCGGGACCAGCTCAGCAATGCCCTGGTCGATGTACTaGTTCACCACCTTATTAATCTCCCCTCGAAGTTTGTCTGTGATT +
Preference number: 6 (lower is better)
Translates to: NSTPGTSSAMPWSMY*FTTLLISPRSLSVI
Trigger: AATCACAGACAAACTTCGAGGGGAGATTAATAAGGTGGTGAACAAGTACATCGACCAGGGCATTGCTGAGCTGGTCCCGGGTGTGCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000322623.10
ENST00000464873.5
ENST00000472125.5
ENST00000478892.1
ENST00000643444.2
ENST00000643535.1
ENST00000646091.1
ENST00000646581.1
CDS TCA 72 bp GTTCTCCATCAGCACCTCTGTCTTCTTGATCTCAGTTaGGTAAACTTCACTCCCCACCATTGGGCAGAAGGG +
Preference number: 6 (lower is better)
Translates to: VLHQHLCLLDLS*VNFTPHHWAEG
Trigger: CCCTTCTGCCCAATGGTGGGGAGTGAAGTTTACTCAACTGAGATCAAGAAGACAGAGGTGCTGATGGAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000464873.5
ENST00000643444.2
ENST00000646581.1
CDS TCA 72 bp CCCTGCGGAAGTTCTCCATCAGCACCTCTGTCTTCTTaGTCTCAGTTGAGTAAACTTCACTCCCCACCATTG +
Preference number: 6 (lower is better)
Translates to: PCGSSPSAPLSS*SQLSKLHSPPL
Trigger: CAATGGTGGGGAGTGAAGTTTACTCAACTGAGATCAAGAAGACAGAGGTGCTGATGGAGAACTTCCGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000464873.5
ENST00000643444.2
ENST00000646581.1
CDS CCA 72 bp AAACCTCAGCCATCTCACTTCATGTACTTATCCTGCTaGTCAGCCAGGATTTTGGCGGAGGACTTGGCATCA +
Preference number: 6 (lower is better)
Translates to: KPQPSHFMYLSC*SARILAEDLAS
Trigger: TGATGCCAAGTCCTCCGCCAAAATCCTGGCTGACCAGCAGGATAAGTACATGAAGTGAGATGGCTGAGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000582176.1
ENST00000643444.2
ENST00000643698.1
ENST00000646091.1
CDS CCA 72 bp GGGCTTCACTGTCTGAAATCCAAAGCTAAATGCAGCTaGGCAAAAAGGGGCCCTCTGAAGTTACTGGATGGT +
Preference number: 6 (lower is better)
Translates to: GLHCLKSKAKCS*AKRGPLKLLDG
Trigger: ACCATCCAGTAACTTCAGAGGGCCCCTTTTTGCCCAGCTGCATTTAGCTTTGGATTTCAGACAGTGAAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS CAA 72 bp GTCTTCGTAGTGCTCTTCACCTCCTCAATCTTCATTTaGCAGACGCCGGGAGCTAAAACCAGCGTGGAAAAC +
Preference number: 6 (lower is better)
Translates to: VFVVLFTSSIFI*QTPGAKTSVEN
Trigger: GTTTTCCACGCTGGTTTTAGCTCCCGGCGTCTGCAAAATGAAGATTGAGGAGGTGAAGAGCACTACGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322623.10
ENST00000643444.2
CDS CAA 72 bp ATTGAGTCATGGGACCTGATGACACAGTTGCCTCGGTaGGATGCAAAGATGACGATGGGAGCGATAGAAGAC +
Preference number: 6 (lower is better)
Translates to: IESWDLMTQLPR*DAKMTMGAIED
Trigger: GTCTTCTATCGCTCCCATCGTCATCTTTGCATCCAACCGAGGCAACTGTGTCATCAGGTCCCATGACTCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472125.5
ENST00000643535.1
CDS CAA 90 bp TTGGTGCCAATCTCCCCCAGGTGGTTCAGTGCCTCCTCACTGATGTaGATTCCTTCCGTCTGGGCACGGATTTTAATGATCTGTTTCATT +
Preference number: 6 (lower is better)
Translates to: LVPISPRWFSASSLM*IPSVWARILMICFI
Trigger: AATGAAACAGATCATTAAAATCCGTGCCCAGACGGAAGGAATCAACATCAGTGAGGAGGCACTGAACCACCTGGGGGAGATTGGCACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000585057.5
ENST00000643444.2
ENST00000645975.1
ENST00000646091.1
CDS TCA 72 bp AAGGGATGTAGGGAAGGGCTGAGGACTGTGAAGCAATaGTTTTACAATGAGTCAGGCCACTGTGAAGGGACA +
Preference number: 6 (lower is better)
Translates to: KGCREGLRTVKQ*FYNESGHCEGT
Trigger: TGTCCCTTCACAGTGGCCTGACTCATTGTAAAATCATTGCTTCACAGTCCTCAGCCCTTCCCTACATCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS CAA 72 bp AGCCTCCAACACTGGCTATTGCGAAGCTGTTGTATGTaGTACGTAGAGGACCCTAGAGGGTACCTGTTTCAT +
Preference number: 6 (lower is better)
Translates to: SLQHWLLRSCCM*YVEDPRGYLFH
Trigger: ATGAAACAGGTACCCTCTAGGGTCCTCTACGTACAACATACAACAGCTTCGCAATAGCCAGTGTTGGAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478243.1
ENST00000643930.1
CDS CAA 72 bp CTAATCTATCAAGAAGAGGCTGACGCTTGTTGCAGTTaGAAGATCTTGGTAGAGTTGGAGGGGAGGCAGGCT +
Preference number: 6 (lower is better)
Translates to: LIYQEEADACCS*KILVELEGRQA
Trigger: AGCCTGCCTCCCCTCCAACTCTACCAAGATCTTCAAACTGCAACAAGCGTCAGCCTCTTCTTGATAGATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS CAA 90 bp GTTCCTTTGGCTGTTTTGAGTCCTATGATCACATGGCTAATGGTTTaGCCATATCCTCCCATGGGATTCTCTGTCTCACACGGAGTTAGC +
Preference number: 6 (lower is better)
Translates to: VPLAVLSPMITWLMV*PYPPMGFSVSHGVS
Trigger: GCTAACTCCGTGTGAGACAGAGAATCCCATGGGAGGATATGGCAAAACCATTAGCCATGTGATCATAGGACTCAAAACAGCCAAAGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000464873.5
ENST00000643444.2
ENST00000646581.1
CDS CAA 90 bp GTTCCAGGAGGTCCTGCCAACAAGACAGCTCTTCCAGCCATTTTCTaGCTTTTGATTAATTCTACTATGACGCCACATGCCCAGAAAGTC +
Preference number: 6 (lower is better)
Translates to: VPGGPANKTALPAIF*LLINSTMTPHAQKV
Trigger: GACTTTCTGGGCATGTGGCGTCATAGTAGAATTAATCAAAAGCAAGAAAATGGCTGGAAGAGCTGTCTTGTTGGCAGGACCTCCTGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS CCA 72 bp ATGGGACCTGTTTCATTTCCTGTGGAGTATACAGCATaGTCCGGATTATCATCACTCGGTCCAGAAGGTCAA +
Preference number: 6 (lower is better)
Translates to: MGPVSFPVEYTA*SGLSSLGPEGQ
Trigger: TTGACCTTCTGGACCGAGTGATGATAATCCGGACCATGCTGTATACTCCACAGGAAATGAAACAGGTCCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS CCA 72 bp AGATGGTATTTGAAGGCAGCAGGTTTCCAGATGAGCTaGACAAGCATGTTCATTGAGTCATGGGACCTGATG +
Preference number: 6 (lower is better)
Translates to: RWYLKAAGFQMS*TSMFIESWDLM
Trigger: CATCAGGTCCCATGACTCAATGAACATGCTTGTCCAGCTCATCTGGAAACCTGCTGCCTTCAAATACCATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472125.5
ENST00000643535.1
CDS CCA 72 bp AGGGTACCTGTTTCATTTCCTGTGGAGTATACAGCATaGTCCGGATTATCATCACTCGGTCCAGAAGGTCAA +
Preference number: 6 (lower is better)
Translates to: RVPVSFPVEYTA*SGLSSLGPEGQ
Trigger: TTGACCTTCTGGACCGAGTGATGATAATCCGGACCATGCTGTATACTCCACAGGAAATGAAACAGGTACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478243.1
ENST00000643930.1
CDS TCA 72 bp GTCCGACAGATAGGGATATTTAACATGGCAGGGAAATaGAAACATAGCCAGCTGGAAGTACATGCCCATCCA +
Preference number: 6 (lower is better)
Translates to: VRQIGIFNMAGK*KHSQLEVHAHP
Trigger: TGGATGGGCATGTACTTCCAGCTGGCTATGTTTTCATTTCCCTGCCATGTTAAATATCCCTATCTGTCGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS CCA 72 bp AGATGGTATTTGAAGGCAGCAGGTTTCCAGATGAGCTaGACAAGCATGTTCATTGAGTCATGGGACCTGTTT +
Preference number: 6 (lower is better)
Translates to: RWYLKAAGFQMS*TSMFIESWDLF
Trigger: AAACAGGTCCCATGACTCAATGAACATGCTTGTCCAGCTCATCTGGAAACCTGCTGCCTTCAAATACCATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS CCA 72 bp ACTCCATCTGTTTCATTTCCTGTGGAGTATACAGCATaGTCCGGATTATCATCACTCGGTCCAGAAGGTCAA +
Preference number: 6 (lower is better)
Translates to: TPSVSFPVEYTA*SGLSSLGPEGQ
Trigger: TTGACCTTCTGGACCGAGTGATGATAATCCGGACCATGCTGTATACTCCACAGGAAATGAAACAGATGGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480616.1
ENST00000646055.1
CDS CAA 72 bp GGTCCTGCCAACAAGACAGCTCTTCCAGCCATTTTCTaGCTTTTGATTAATTCTACTATGACGCCACATGCC +
Preference number: 6 (lower is better)
Translates to: GPANKTALPAIF*LLINSTMTPHA
Trigger: GGCATGTGGCGTCATAGTAGAATTAATCAAAAGCAAGAAAATGGCTGGAAGAGCTGTCTTGTTGGCAGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000464873.5
ENST00000643444.2
ENST00000646581.1
CDS CAA 72 bp GCTGTTTTGAGTCCTATGATCACATGGCTAATGGTTTaGCCATATCCTCCCATGGGATTCTCTGTCTCACAC +
Preference number: 6 (lower is better)
Translates to: AVLSPMITWLMV*PYPPMGFSVSH
Trigger: GTGTGAGACAGAGAATCCCATGGGAGGATATGGCAAAACCATTAGCCATGTGATCATAGGACTCAAAACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000464873.5
ENST00000643444.2
ENST00000646581.1
CDS TCA 72 bp TTTTGGCGGAGGACTTGGCATCATAGAAAAGTTCACTaGTCTCTTCGACATGCTCTTTCTCAATGCTGTCCT +
Preference number: 6 (lower is better)
Translates to: FWRRTWHHRKVH*SLRHALSQCCP
Trigger: AGGACAGCATTGAGAAAGAGCATGTCGAAGAGATCAGTGAACTTTTCTATGATGCCAAGTCCTCCGCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000582176.1
ENST00000643444.2
ENST00000643698.1
ENST00000646091.1
CDS CCA 72 bp TTCAGTGCCTCCTCACTGATGTTGATTCCTTCCGTCTaGGCACGGATTTTAATGATCTGTTTCATTTCCTGT +
Preference number: 6 (lower is better)
Translates to: FSASSLMLIPSV*ARILMICFISC
Trigger: ACAGGAAATGAAACAGATCATTAAAATCCGTGCCCAGACGGAAGGAATCAACATCAGTGAGGAGGCACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322623.10
ENST00000478892.1
ENST00000585057.5
ENST00000643444.2
ENST00000645975.1
ENST00000646091.1
CDS CCA 72 bp ATGTTCATTGAGTCATGGGACCTGTTTCATTTCCTGTaGAGTATACAGCATGGTCCGGATTATCATCACTCG +
Preference number: 6 (lower is better)
Translates to: MFIESWDLFHFL*SIQHGPDYHHS
Trigger: CGAGTGATGATAATCCGGACCATGCTGTATACTCCACAGGAAATGAAACAGGTCCCATGACTCAATGAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464873.5
ENST00000646581.1
CDS CAA 72 bp GGGTCCAGTTTCAACTGTTTGGTTCCTTTGGCTGTTTaGAGTCCTATGATCACATGGCTAATGGTTTTGCCA +
Preference number: 6 (lower is better)
Translates to: GSSFNCLVPLAV*SPMITWLMVLP
Trigger: TGGCAAAACCATTAGCCATGTGATCATAGGACTCAAAACAGCCAAAGGAACCAAACAGTTGAAACTGGACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322623.10
ENST00000464873.5
ENST00000643444.2
ENST00000646581.1
CDS TCA 72 bp CATCACCGGGAGATATCTAATCTATCAAGAAGAGGCTaGCGCTTGTTGCAGTTTGAAGATCTTGGTAGAGTT +
Preference number: 6 (lower is better)
Translates to: HHREISNLSRRG*RLLQFEDLGRV
Trigger: AACTCTACCAAGATCTTCAAACTGCAACAAGCGTCAGCCTCTTCTTGATAGATTAGATATCTCCCGGTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1
CDS TCA 72 bp ATCTTTAATCATTTAATAACCTGCAGGGATAGTTTATaGGGGTGTCGGCTTGGATTGCAGAGTACACAAGTT +
Preference number: 6 (lower is better)
Translates to: IFNHLITCRDSL*GCRLGLQSTQV
Trigger: AACTTGTGTACTCTGCAATCCAAGCCGACACCCTCATAAACTATCCCTGCAGGTTATTAAATGATTAAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582176.1
ENST00000643698.1