RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RUSF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000140688

Ensembl transcript IDs: ENST00000327237.7, ENST00000430477.6, ENST00000541442.5, ENST00000564807.5, ENST00000565128.5, ENST00000566148.1, ENST00000567578.1, ENST00000567673.5, ENST00000567994.5, ENST00000568491.1, ENST00000570164.5

Found 601 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCGGCAGCAGCCAGGCGGCTGGAGGACATCAGCGAGGACCCGAGCTaGGCCCGTGTGGTCAACCTCAATGCCCTGCTCATGATGGCAGTG +
Preference number: 1 (lower is better)
Translates to: AAAARRLEDISEDPS*ARVVNLNALLMMAV
Trigger: CACTGCCATCATGAGCAGGGCATTGAGGTTGACCACACGGGCCCAGCTCGGGTCCTCGCTGATGTCCTCCAGCCGCCTGGCTGCTGCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000567994.5
ENST00000570164.5
3UTR CCA 90 bp AACTCCCACCTCGTTCGTGCTCCCACCCTCCCCAGCTCCACCGCCTaGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGAGGACCTGG +
Preference number: 1 (lower is better)
Translates to: NSHLVRAPTLPSSTA*SSVSGIARRNGRTW
Trigger: CCAGGTCCTCCCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTGGGGAGGGTGGGAGCACGAACGAGGTGGGAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR CCA 90 bp CCATGTTGTTCCTCCGAGCCTGGTGCACGGTCAGGGCAGCCCGAGTaGCCCCACCAGCAACACTCACGATGCACTTGGCTAGGTTGCTGG +
Preference number: 1 (lower is better)
Translates to: PCCSSEPGARSGQPE*PHQQHSRCTWLGCW
Trigger: CCAGCAACCTAGCCAAGTGCATCGTGAGTGTTGCTGGTGGGGCCACTCGGGCTGCCCTGACCGTGCACCAGGCTCGGAGGAACAACATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567578.1
3UTR CCA 90 bp AAGGAGGAACGGGAGGACCTGGAGGACATCAGCGAGGACCCGAGCTaGGCCCGTGTGGTCAACCTCAATGCCCTGCTCATGATGGCAGTG +
Preference number: 1 (lower is better)
Translates to: KEEREDLEDISEDPS*ARVVNLNALLMMAV
Trigger: CACTGCCATCATGAGCAGGGCATTGAGGTTGACCACACGGGCCCAGCTCGGGTCCTCGCTGATGTCCTCCAGGTCCTCCCGTTCCTCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430477.6
3UTR CCA 90 bp AGGGGCTTGGGGTTTATCCCGAGGGCACAGGGCAGCCATGTAGGGTaGAGTTGGCATGAGTTAAGCCTGGGCTGGGTGTGTAGACTGGAC +
Preference number: 1 (lower is better)
Translates to: RGLGFIPRAQGSHVG*SWHELSLGWVCRLD
Trigger: GTCCAGTCTACACACCCAGCCCAGGCTTAACTCATGCCAACTCCACCCTACATGGCTGCCCTGTGCCCTCGGGATAAACCCCAAGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR GCA 90 bp AATGGGTGCCCAGAGAGTGCCATGGAGATGAATGGTAGGGCACCATaGTGGGAGGTGGGGCTGGAGGAGCTGAGTTCCCGCAAACTAACT +
Preference number: 1 (lower is better)
Translates to: NGCPESAMEMNGRAP*WEVGLEELSSRKLT
Trigger: AGTTAGTTTGCGGGAACTCAGCTCCTCCAGCCCCACCTCCCAGCATGGTGCCCTACCATTCATCTCCATGGCACTCTCTGGGCACCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
3UTR CCA 90 bp GCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGAGGACCTaGATGCTGATGAGCAGCAAGGCTCCTCACTCCCTGTACAGAATG +
Preference number: 1 (lower is better)
Translates to: AWSSVSGIARRNGRT*MLMSSKAPHSLYRM
Trigger: CATTCTGTACAGGGAGTGAGGAGCCTTGCTGCTCATCAGCATCCAGGTCCTCCCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
3UTR TCA 90 bp GCCAGGCCAGTGTCACAAGCGCTACCATCTGGGTGTAGACAGACCTaGGCTGACAAAGCTGGGGGAGCAAGGCCAACGGCTTTAAACACA +
Preference number: 1 (lower is better)
Translates to: ARPVSQALPSGCRQT*ADKAGGARPTALNT
Trigger: TGTGTTTAAAGCCGTTGGCCTTGCTCCCCCAGCTTTGTCAGCTCAGGTCTGTCTACACCCAGATGGTAGCGCTTGTGACACTGGCCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR TCA 90 bp ATTTATTTGAACCGGCCTGGGGGAGGCTTGATGTTGATGGGTTGGTaGTTAAAGCCTCCCAAAGCCAATCCTTGGCATGGCCTTTGGGAC +
Preference number: 1 (lower is better)
Translates to: IYLNRPGGGLMLMGW*LKPPKANPWHGLWD
Trigger: GTCCCAAAGGCCATGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAACCCATCAACATCAAGCCTCCCCCAGGCCGGTTCAAATAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR CCA 90 bp GTTGATGGGTTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCATaGCCTTTGGGACTCAAAACACAGGATCTGACTGGTGGGCACAAT +
Preference number: 1 (lower is better)
Translates to: VDGLVIKASQSQSLA*PLGLKTQDLTGGHN
Trigger: ATTGTGCCCACCAGTCAGATCCTGTGTTTTGAGTCCCAAAGGCCATGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAACCCATCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR CCA 90 bp CCAATCCTTGGCATGGCCTTTGGGACTCAAAACACAGGATCTGACTaGTGGGCACAATACCATCTTGAACGCCCACAAAAAGGTTTGGTT +
Preference number: 1 (lower is better)
Translates to: PILGMAFGTQNTGSD*WAQYHLERPQKGLV
Trigger: AACCAAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGCCCACCAGTCAGATCCTGTGTTTTGAGTCCCAAAGGCCATGCCAAGGATTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR-3UTR CCA 90 bp AGCAGAGGTGGGGTGGGCAGTCCTCCGCCCCTTACCCAGGAGGAGGCAGCGGCACGAGCTGGGCCCGTGTaGTCAACCTCAATGCCCTGC +
Preference number: 2 (lower is better)
Translates to: SRGGVGSPPPLTQEEAAARAGPV*STSMPC
Trigger: GCAGGGCATTGAGGTTGACCACACGGGCCCAGCTCG...TGCCGCTGCCTCCTCCTGGGTAAGGGGCGGAGGACTGCCCACCCCACCTCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000567994.5
ENST00000570164.5
3UTR CAA 90 bp ACCAGCGTCTCCTGGCTGCTGTCCTTGGCTGACACGTCAGCCATGTaGTTCCTCCGAGCCTGGTGCACGGTCAGGGCAGCCCGAGTGGCC +
Preference number: 2 (lower is better)
Translates to: TSVSWLLSLADTSAM*FLRAWCTVRAARVA
Trigger: GGCCACTCGGGCTGCCCTGACCGTGCACCAGGCTCGGAGGAACAACATGGCTGACGTGTCAGCCAAGGACAGCAGCCAGGAGACGCTGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567578.1
3UTR-3UTR GCA 90 bp AGCAGAGGTGGGGTGGGCAGTCCTCCGCCCCTTACCCAGGAGGAGGCAGCGGCATGGCCAAAGTGTCCTTaGTCCAGGTTCCTGCCCTGG +
Preference number: 2 (lower is better)
Translates to: SRGGVGSPPPLTQEEAAAWPKCP*SRFLPW
Trigger: CCAGGGCAGGAACCTGGAGCAAGGACACTTTGGCCA...TGCCGCTGCCTCCTCCTGGGTAAGGGGCGGAGGACTGCCCACCCCACCTCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000567994.5
ENST00000570164.5
3UTR-3UTR CCA 90 bp CCTCCCCAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGAGCGAGGACCCGAGCTaGGCCCGTGTGGTCAACCTC +
Preference number: 2 (lower is better)
Translates to: PPQLHRLVFSLRHSKEERSEDPS*ARVVNL
Trigger: GAGGTTGACCACACGGGCCCAGCTCGGGTCCTCGCT...CCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTGGGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR-3UTR CCA 90 bp CAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGAGGACGGGGTGAGAAGGTCCTaGCTCCCCTTCTCCCGGCCT +
Preference number: 2 (lower is better)
Translates to: QLHRLVFSLRHSKEEREDGVRRS*LPFSRP
Trigger: AGGCCGGGAGAAGGGGAGCCAGGACCTTCTCACCCC...GTCCTCCCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR-3UTR GCA 90 bp CTCCCCAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGGCCTGGCCCACCCGCTaGAGTTGCCCTAAGGAAAAA +
Preference number: 2 (lower is better)
Translates to: LPSSTAWSSVSGIARRNGAWPTR*SCPKEK
Trigger: TTTTTCCTTAGGGCAACTGCAGCGGGTGGGCCAGGC...CCCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTGGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR-3UTR CCA 90 bp GTGAGCAGGACTGCCAGGCCAGTGTCACAAGCGCTACCATCTGGGTGTAGACAGGGGGTGAGAAGGTCCTaGCTCCCCTTCTCCCGGCCT +
Preference number: 2 (lower is better)
Translates to: VSRTARPVSQALPSGCRQGVRRS*LPFSRP
Trigger: AGGCCGGGAGAAGGGGAGCCAGGACCTTCTCACCCC...CTGTCTACACCCAGATGGTAGCGCTTGTGACACTGGCCTGGCAGTCCTGCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR-3UTR CCA 90 bp CTGACCAAGAGCCCCGCCAGGTTCACCAGCGTCTCCTGGCTGCTGTCCTTGGCTTTCACCAGCGTCTCCTaGCTGCTGTCCTTGGCTGAC +
Preference number: 2 (lower is better)
Translates to: LTKSPARFTSVSWLLSLAFTSVS*LLSLAD
Trigger: GTCAGCCAAGGACAGCAGCCAGGAGACGCTGGTGAA...AGCCAAGGACAGCAGCCAGGAGACGCTGGTGAACCTGGCGGGGCTCTTGGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565128.5
ENST00000567578.1
3UTR-3UTR TCA 90 bp CAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGAGGACTCAATGCCCTGCTCATaGTGGCAGTGGCCGTGTTCC +
Preference number: 2 (lower is better)
Translates to: QLHRLVFSLRHSKEEREDSMPCS*WQWPCS
Trigger: GGAACACGGCCACTGCCATCATGAGCAGGGCATTGA...GTCCTCCCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR-3UTR GCA 90 bp CAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGAGGACTGGCCAAAGTGTCCTTaGTCCAGGTTCCTGCCCTGG +
Preference number: 2 (lower is better)
Translates to: QLHRLVFSLRHSKEEREDWPKCP*SRFLPW
Trigger: CCAGGGCAGGAACCTGGAGCAAGGACACTTTGGCCA...GTCCTCCCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR-3UTR GCA 90 bp GACACGTCAGCCATGTTGTTCCTCCGAGCCTGGTGCACGGTCAGGGCAGCCCGATGCACTTGGCTAGGTTaGTGGTGGAGACGGTCATGG +
Preference number: 2 (lower is better)
Translates to: DTSAMLFLRAWCTVRAARCTWLG*WWRRSW
Trigger: CCATGACCGTCTCCACCAGCAACCTAGCCAAGTGCA...TCGGGCTGCCCTGACCGTGCACCAGGCTCGGAGGAACAACATGGCTGACGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567578.1
3UTR-3UTR CCA 90 bp CAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGAGGACTCCCCTGTCCTGCTGTaGCCAAAGTGTCCTTGCTCC +
Preference number: 2 (lower is better)
Translates to: QLHRLVFSLRHSKEEREDSPVLL*PKCPCS
Trigger: GGAGCAAGGACACTTTGGCCACAGCAGGACAGGGGA...GTCCTCCCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR-3UTR TCA 90 bp GGCGTAGATGTGGAGGGCAGTGAGGAAGAAGAAACATCCAAGGCTGAAGCCAGGGGAGCATCAGGAGGCTaGCCAAGAGCCCCGCCAGGT +
Preference number: 2 (lower is better)
Translates to: GVDVEGSEEEETSKAEARGASGG*PRAPPG
Trigger: ACCTGGCGGGGCTCTTGGTCAGCCTCCTGATGCTCC...CCTGGCTTCAGCCTTGGATGTTTCTTCTTCCTCACTGCCCTCCACATCTACGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565128.5
3UTR-3UTR GCA 90 bp GGTGTGGAAGGATGGCCGGGTTTCTGCAGCAGCAGGAGGAAAGGGTGGGAGCACCCTGTACAGAATGGGTaGCCAGAGAGTGCCATGGAG +
Preference number: 2 (lower is better)
Translates to: GVEGWPGFCSSRRKGWEHPVQNG*PESAME
Trigger: CTCCATGGCACTCTCTGGGCACCCATTCTGTACAGG...GTGCTCCCACCCTTTCCTCCTGCTGCTGCAGAAACCCGGCCATCCTTCCACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
3UTR-3UTR CCA 90 bp CCGTGTGGTCAACCTCAATGCCCTGCTCATGATGGCAGTGGCCGTGTTCCTCTGCGGCCTTCCTCTGCCTaGGGCCCACTGCATCTGATT +
Preference number: 2 (lower is better)
Translates to: PCGQPQCPAHDGSGRVPLRPSSA*GPLHLI
Trigger: AATCAGATGCAGTGGGCCCCAGGCAGAGGAAGGCCG...CAGAGGAACACGGCCACTGCCATCATGAGCAGGGCATTGAGGTTGACCACACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
3UTR-3UTR TCA 90 bp AGCAGGACTGCCAGGCCAGTGTCACAAGCGCTACCATCTGGGTGTAGACAGACCGGGGCCCACTGCATCTaGTTGGCAGTCACTTCCCAT +
Preference number: 2 (lower is better)
Translates to: SRTARPVSQALPSGCRQTGAHCI*LAVTSH
Trigger: ATGGGAAGTGACTGCCAATCAGATGCAGTGGGCCCC...GGTCTGTCTACACCCAGATGGTAGCGCTTGTGACACTGGCCTGGCAGTCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR-3UTR TCA 90 bp AGCAGGACTGCCAGGCCAGTGTCACAAGCGCTACCATCTGGGTGTAGACAGACCAGGGTGGAGTTGGCATaGGTTAAGCCTGGGCTGGGT +
Preference number: 2 (lower is better)
Translates to: SRTARPVSQALPSGCRQTRVELA*VKPGLG
Trigger: ACCCAGCCCAGGCTTAACTCATGCCAACTCCACCCT...GGTCTGTCTACACCCAGATGGTAGCGCTTGTGACACTGGCCTGGCAGTCCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR-3UTR GCA 90 bp GTCAACCTCAATGCCCTGCTCATGATGGCAGTGGCCGTGTTCCTCTGGGGCTTCGCCTGGCCCACCCGCTaGAGTTGCCCTAAGGAAAAA +
Preference number: 2 (lower is better)
Translates to: VNLNALLMMAVAVFLWGFAWPTR*SCPKEK
Trigger: TTTTTCCTTAGGGCAACTGCAGCGGGTGGGCCAGGC...GAAGCCCCAGAGGAACACGGCCACTGCCATCATGAGCAGGGCATTGAGGTTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
3UTR-3UTR GCA 90 bp ACTGTGAGCAGGACTGCCAGGCCAGTGTCACAAGCGCTACCATCTGGGTGTAGAAATGGTAGGGCACCATaGTGGGAGGTGGGGCTGGAG +
Preference number: 2 (lower is better)
Translates to: TVSRTARPVSQALPSGCRNGRAP*WEVGLE
Trigger: CTCCAGCCCCACCTCCCAGCATGGTGCCCTACCATT...TCTACACCCAGATGGTAGCGCTTGTGACACTGGCCTGGCAGTCCTGCTCACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
3UTR-3UTR CCA 90 bp CCGTGTGGTCAACCTCAATGCCCTGCTCATGATGGCAGTGGCCGTGTTCCTCTGTCCCCTGTCCTGCTGTaGCCAAAGTGTCCTTGCTCC +
Preference number: 2 (lower is better)
Translates to: PCGQPQCPAHDGSGRVPLSPVLL*PKCPCS
Trigger: GGAGCAAGGACACTTTGGCCACAGCAGGACAGGGGA...CAGAGGAACACGGCCACTGCCATCATGAGCAGGGCATTGAGGTTGACCACACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
3UTR-3UTR CCA 90 bp CGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCGGGGTGAGAAGGTCCTaGCTCCCCTTCTCCCGGCCT +
Preference number: 2 (lower is better)
Translates to: RVPLGLLCLRPTALDTISGVRRS*LPFSRP
Trigger: AGGCCGGGAGAAGGGGAGCCAGGACCTTCTCACCCC...GCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
3UTR-3UTR CCA 90 bp AGCCAATCCTTGGCATGGCCTTTGGGACTCAAAACACAGGATCTGACTGGTGGGCAGCAGCCAGGCGGCTaGAGGACATCAGCGAGGACC +
Preference number: 2 (lower is better)
Translates to: SQSLAWPLGLKTQDLTGGQQPGG*RTSART
Trigger: GGTCCTCGCTGATGTCCTCCAGCCGCCTGGCTGCTG...CCCACCAGTCAGATCCTGTGTTTTGAGTCCCAAAGGCCATGCCAAGGATTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
3UTR-3UTR TCA 90 bp ACGGCTTTAAACACAAGCTCAGGGGCTTGGGGTTTATCCCGAGGGCACAGGGCATCAATGCCCTGCTCATaGTGGCAGTGGCCGTGTTCC +
Preference number: 2 (lower is better)
Translates to: TALNTSSGAWGLSRGHRASMPCS*WQWPCS
Trigger: GGAACACGGCCACTGCCATCATGAGCAGGGCATTGA...TGCCCTGTGCCCTCGGGATAAACCCCAAGCCCCTGAGCTTGTGTTTAAAGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR-3UTR TCA 90 bp ACACGTCAGCCATGTTGTTCCTCCGAGCCTGGTGCACGGTCAGGGCAGCCCGAGTGGAGACGGTCATGGTaGAACAGATTGGGTATACAG +
Preference number: 2 (lower is better)
Translates to: TRQPCCSSEPGARSGQPEWRRSW*NRLGIQ
Trigger: CTGTATACCCAATCTGTTTCACCATGACCGTCTCCA...CTCGGGCTGCCCTGACCGTGCACCAGGCTCGGAGGAACAACATGGCTGACGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567578.1
3UTR-3UTR CCA 90 bp GGGTTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCATGGCCTTTGGGACTCCGAGCTGGGCCCGTGTaGTCAACCTCAATGCCCTGC +
Preference number: 2 (lower is better)
Translates to: GLVIKASQSQSLAWPLGLRAGPV*STSMPC
Trigger: GCAGGGCATTGAGGTTGACCACACGGGCCCAGCTCG...GAGTCCCAAAGGCCATGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR-3UTR CCA 90 bp GTGAGCAGGACTGCCAGGCCAGTGTCACAAGCGCTACCATCTGGGTGTAGACAGAGGAACGGGAGGACCTaGATGCTGATGAGCAGCAAG +
Preference number: 2 (lower is better)
Translates to: VSRTARPVSQALPSGCRQRNGRT*MLMSSK
Trigger: CTTGCTGCTCATCAGCATCCAGGTCCTCCCGTTCCT...CTGTCTACACCCAGATGGTAGCGCTTGTGACACTGGCCTGGCAGTCCTGCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
3UTR-3UTR CCA 90 bp GTCTCCTGGCTGCTGTCCTTGGCTGACACGTCAGCCATGTTGTTCCTCCGAGCCCACTCACGATGCACTTaGCTAGGTTGCTGGTGGAGA +
Preference number: 2 (lower is better)
Translates to: VSWLLSLADTSAMLFLRAHSRCT*LGCWWR
Trigger: TCTCCACCAGCAACCTAGCCAAGTGCATCGTGAGTG...GGCTCGGAGGAACAACATGGCTGACGTGTCAGCCAAGGACAGCAGCCAGGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567578.1
3UTR-3UTR TCA 90 bp AGGCCAACGGCTTTAAACACAAGCTCAGGGGCTTGGGGTTTATCCCGAGGGCACTCTGGTTTTGTGGAATaGGCAGAGGTGGGGTGGGCA +
Preference number: 2 (lower is better)
Translates to: RPTALNTSSGAWGLSRGHSGFVE*AEVGWA
Trigger: TGCCCACCCCACCTCTGCTCATTCCACAAAACCAGA...GTGCCCTCGGGATAAACCCCAAGCCCCTGAGCTTGTGTTTAAAGCCGTTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
3UTR-3UTR GCA 90 bp GGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATATGGCCAAAGTGTCCTTaGTCCAGGTTCCTGCCCTGG +
Preference number: 2 (lower is better)
Translates to: GRVPLGLLCLRPTALDTIWPKCP*SRFLPW
Trigger: CCAGGGCAGGAACCTGGAGCAAGGACACTTTGGCCA...TATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
3UTR-3UTR CCA 90 bp GGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATATCCCCTGTCCTGCTGTaGCCAAAGTGTCCTTGCTCC +
Preference number: 2 (lower is better)
Translates to: GRVPLGLLCLRPTALDTISPVLL*PKCPCS
Trigger: GGAGCAAGGACACTTTGGCCACAGCAGGACAGGGGA...TATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
3UTR-3UTR CCA 90 bp AGCCAATCCTTGGCATGGCCTTTGGGACTCAAAACACAGGATCTGACTGGTGGGCGGCCTTCCTCTGCCTaGGGCCCACTGCATCTGATT +
Preference number: 2 (lower is better)
Translates to: SQSLAWPLGLKTQDLTGGRPSSA*GPLHLI
Trigger: AATCAGATGCAGTGGGCCCCAGGCAGAGGAAGGCCG...CCCACCAGTCAGATCCTGTGTTTTGAGTCCCAAAGGCCATGCCAAGGATTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR-3UTR CCA 90 bp GGGTTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCATGGCCTTTGGGACTCCGGCCTTCCTCTGCCTaGGGCCCACTGCATCTGATT +
Preference number: 2 (lower is better)
Translates to: GLVIKASQSQSLAWPLGLRPSSA*GPLHLI
Trigger: AATCAGATGCAGTGGGCCCCAGGCAGAGGAAGGCCG...GAGTCCCAAAGGCCATGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR-3UTR CCA 90 bp TGGGTAGGGCAGGCAGTGACGAGCTGGTGTGCAAGAGACTTTAGGGCCAGGCATCGCCAGTGCCTGCTCTaGTTTTGTGGAATGAGCAGA +
Preference number: 2 (lower is better)
Translates to: WVGQAVTSWCARDFRARHRQCLL*FCGMSR
Trigger: TCTGCTCATTCCACAAAACCAGAGCAGGCACTGGCG...ATGCCTGGCCCTAAAGTCTCTTGCACACCAGCTCGTCACTGCCTGCCCTACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
3UTR-3UTR TCA 90 bp CGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCGGGGCCCACTGCATCTaGTTGGCAGTCACTTCCCAT +
Preference number: 2 (lower is better)
Translates to: RVPLGLLCLRPTALDTISGAHCI*LAVTSH
Trigger: ATGGGAAGTGACTGCCAATCAGATGCAGTGGGCCCC...GCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
3UTR-3UTR TCA 90 bp GATCTGACTGGTGGGCACAATACCATCTTGAACGCCCACAAAAAGGTTTGGTTTCACAGGAAGTGGGGGTaGGGAGCCTGCGGTGCTCCC +
Preference number: 2 (lower is better)
Translates to: DLTGGHNTILNAHKKVWFHRKWG*GACGAP
Trigger: GGGAGCACCGCAGGCTCCTCACCCCCACTTCCTGTG...AAACCAAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGCCCACCAGTCAGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR-3UTR GCA 90 bp ACGGCTTTAAACACAAGCTCAGGGGCTTGGGGTTTATCCCGAGGGCACAGGGCACCTCTGGGGCTTCTATaGCTAAGACCAACTGCGTTG +
Preference number: 2 (lower is better)
Translates to: TALNTSSGAWGLSRGHRAPLGLL*LRPTAL
Trigger: CAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGG...TGCCCTGTGCCCTCGGGATAAACCCCAAGCCCCTGAGCTTGTGTTTAAAGCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR-3UTR GCA 90 bp TGGGTAGGGCAGGCAGTGACGAGCTGGTGTGCAAGAGACTTTAGGGCCAGGCATTTCCCGCAAACTAACTaGAGGGCCTCAATTTCCCTC +
Preference number: 2 (lower is better)
Translates to: WVGQAVTSWCARDFRARHFPQTN*RASISL
Trigger: GAGGGAAATTGAGGCCCTGCAGTTAGTTTGCGGGAA...ATGCCTGGCCCTAAAGTCTCTTGCACACCAGCTCGTCACTGCCTGCCCTACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
3UTR-3UTR CCA 90 bp GGGTTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCATGGCCTTTGGGACTCTCCCCTGTCCTGCTGTaGCCAAAGTGTCCTTGCTCC +
Preference number: 2 (lower is better)
Translates to: GLVIKASQSQSLAWPLGLSPVLL*PKCPCS
Trigger: GGAGCAAGGACACTTTGGCCACAGCAGGACAGGGGA...GAGTCCCAAAGGCCATGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR-3UTR CCA 90 bp ACTGTGAGCAGGACTGCCAGGCCAGTGTCACAAGCGCTACCATCTGGGTGTAGACCTGCTCTGGTTTTGTaGAATGAGCAGAGGTGGGGT +
Preference number: 2 (lower is better)
Translates to: TVSRTARPVSQALPSGCRPALVL*NEQRWG
Trigger: ACCCCACCTCTGCTCATTCCACAAAACCAGAGCAGG...TCTACACCCAGATGGTAGCGCTTGTGACACTGGCCTGGCAGTCCTGCTCACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
3UTR-3UTR CCA 90 bp AGCCAATCCTTGGCATGGCCTTTGGGACTCAAAACACAGGATCTGACTGGTGGGCTGATGGTGGCAGGGTaGGGTGAGGACAGGACAAGA +
Preference number: 2 (lower is better)
Translates to: SQSLAWPLGLKTQDLTGGLMVAG*GEDRTR
Trigger: TCTTGTCCTGTCCTCACCCCACCCTGCCACCATCAG...CCCACCAGTCAGATCCTGTGTTTTGAGTCCCAAAGGCCATGCCAAGGATTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR-3UTR CCA 90 bp GTTGGCGTAGATGTGGAGGGCAGTGAGGAAGAAGAAACATCCAAGGCTGAAGCCTTCACCAGCGTCTCCTaGCTGCTGTCCTTGGCTGAC +
Preference number: 2 (lower is better)
Translates to: VGVDVEGSEEEETSKAEAFTSVS*LLSLAD
Trigger: GTCAGCCAAGGACAGCAGCCAGGAGACGCTGGTGAA...GGCTTCAGCCTTGGATGTTTCTTCTTCCTCACTGCCCTCCACATCTACGCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565128.5
3UTR-3UTR GCA 90 bp CCGTGTGGTCAACCTCAATGCCCTGCTCATGATGGCAGTGGCCGTGTTCCTCTGATGCCTAAGACCAACTaGGTTGGACACCATAAGCCA +
Preference number: 2 (lower is better)
Translates to: PCGQPQCPAHDGSGRVPLMPKTN*VGHHKP
Trigger: TGGCTTATGGTGTCCAACGCAGTTGGTCTTAGGCAT...CAGAGGAACACGGCCACTGCCATCATGAGCAGGGCATTGAGGTTGACCACACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
3UTR-3UTR CCA 90 bp GATCTGACTGGTGGGCACAATACCATCTTGAACGCCCACAAAAAGGTTTGGTTTCTTCCCATGAGGGCCTaGCCCACCCGCTGCAGTTGC +
Preference number: 2 (lower is better)
Translates to: DLTGGHNTILNAHKKVWFLPMRA*PTRCSC
Trigger: GCAACTGCAGCGGGTGGGCCAGGCCCTCATGGGAAG...AAACCAAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGCCCACCAGTCAGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR-3UTR CCA 90 bp AGGCTTGATGTTGATGGGTTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCACGAGCTGGGCCCGTGTaGTCAACCTCAATGCCCTGC +
Preference number: 2 (lower is better)
Translates to: RLDVDGLVIKASQSQSLARAGPV*STSMPC
Trigger: GCAGGGCATTGAGGTTGACCACACGGGCCCAGCTCG...TGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAACCCATCAACATCAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR-3UTR CCA 90 bp TTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCATGGCCTTTGGGACTCAAATGGAATGAGCAGAGGTaGGGTGGGCAGTCCTCCGCC +
Preference number: 2 (lower is better)
Translates to: LVIKASQSQSLAWPLGLKWNEQR*GGQSSA
Trigger: GGCGGAGGACTGCCCACCCCACCTCTGCTCATTCCA...TTTGAGTCCCAAAGGCCATGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
3UTR-3UTR CCA 90 bp GACACGTCAGCCATGTTGTTCCTCCGAGCCTGGTGCACGGTCAGGGCAGCCCGACATGGTGAAACAGATTaGGTATACAGGAGCCATAAT +
Preference number: 2 (lower is better)
Translates to: DTSAMLFLRAWCTVRAARHGETD*VYRSHN
Trigger: ATTATGGCTCCTGTATACCCAATCTGTTTCACCATG...TCGGGCTGCCCTGACCGTGCACCAGGCTCGGAGGAACAACATGGCTGACGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567578.1
3UTR-3UTR GCA 90 bp ACGGCTTTAAACACAAGCTCAGGGGCTTGGGGTTTATCCCGAGGGCACAGGGCAATGCCTAAGACCAACTaGGTTGGACACCATAAGCCA +
Preference number: 2 (lower is better)
Translates to: TALNTSSGAWGLSRGHRAMPKTN*VGHHKP
Trigger: TGGCTTATGGTGTCCAACGCAGTTGGTCTTAGGCAT...TGCCCTGTGCCCTCGGGATAAACCCCAAGCCCCTGAGCTTGTGTTTAAAGCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR-3UTR GCA 90 bp AGCCAATCCTTGGCATGGCCTTTGGGACTCAAAACACAGGATCTGACTGGTGGGCCTCTGGGGCTTCTATaGCTAAGACCAACTGCGTTG +
Preference number: 2 (lower is better)
Translates to: SQSLAWPLGLKTQDLTGGPLGLL*LRPTAL
Trigger: CAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGG...CCCACCAGTCAGATCCTGTGTTTTGAGTCCCAAAGGCCATGCCAAGGATTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR-3UTR CCA 90 bp GATCTGACTGGTGGGCACAATACCATCTTGAACGCCCACAAAAAGGTTTGGTTTCGAGCTGGGCCCGTGTaGTCAACCTCAATGCCCTGC +
Preference number: 2 (lower is better)
Translates to: DLTGGHNTILNAHKKVWFRAGPV*STSMPC
Trigger: GCAGGGCATTGAGGTTGACCACACGGGCCCAGCTCG...AAACCAAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGCCCACCAGTCAGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR CAA 90 bp GGGTTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCATGGCCTTaGGGACTCAAAACACAGGATCTGACTGGTGGGCACAATACCATC +
Preference number: 2 (lower is better)
Translates to: GLVIKASQSQSLAWP*GLKTQDLTGGHNTI
Trigger: GATGGTATTGTGCCCACCAGTCAGATCCTGTGTTTTGAGTCCCAAAGGCCATGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR-3UTR TCA 90 bp GCACAATACCATCTTGAACGCCCACAAAAAGGTTTGGTTTTGTTGCCAAAGGGCGGGGCCCACTGCATCTaGTTGGCAGTCACTTCCCAT +
Preference number: 2 (lower is better)
Translates to: AQYHLERPQKGLVLLPKGGAHCI*LAVTSH
Trigger: ATGGGAAGTGACTGCCAATCAGATGCAGTGGGCCCC...GCCCTTTGGCAACAAAACCAAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR-3UTR TCA 90 bp GATCTGACTGGTGGGCACAATACCATCTTGAACGCCCACAAAAAGGTTTGGTTTGGGGCCCACTGCATCTaGTTGGCAGTCACTTCCCAT +
Preference number: 2 (lower is better)
Translates to: DLTGGHNTILNAHKKVWFGAHCI*LAVTSH
Trigger: ATGGGAAGTGACTGCCAATCAGATGCAGTGGGCCCC...AAACCAAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGCCCACCAGTCAGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR-3UTR GCA 90 bp GGGTTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCATGGCCTTTGGGACTCATGCCTAAGACCAACTaGGTTGGACACCATAAGCCA +
Preference number: 2 (lower is better)
Translates to: GLVIKASQSQSLAWPLGLMPKTN*VGHHKP
Trigger: TGGCTTATGGTGTCCAACGCAGTTGGTCTTAGGCAT...GAGTCCCAAAGGCCATGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR CAA 90 bp CTTGATGTTGATGGGTTGGTGATTAAAGCCTCCCAAAGCCAATCCTaGGCATGGCCTTTGGGACTCAAAACACAGGATCTGACTGGTGGG +
Preference number: 2 (lower is better)
Translates to: LDVDGLVIKASQSQS*AWPLGLKTQDLTGG
Trigger: CCCACCAGTCAGATCCTGTGTTTTGAGTCCCAAAGGCCATGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAACCCATCAACATCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR CAA 90 bp ATACATTTATTTGAACCGGCCTGGGGGAGGCTTGATGTTGATGGGTaGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCATGGCCTTTG +
Preference number: 2 (lower is better)
Translates to: IHLFEPAWGRLDVDG*VIKASQSQSLAWPL
Trigger: CAAAGGCCATGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAACCCATCAACATCAAGCCTCCCCCAGGCCGGTTCAAATAAATGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR-3UTR TCA 90 bp TTATTTGAACCGGCCTGGGGGAGGCTTGATGTTGATGGGTTGGTGATTAAAGCCTCAAAACACAGGATCTaGCTGGTGGGCACAATACCA +
Preference number: 2 (lower is better)
Translates to: LFEPAWGRLDVDGLVIKASKHRI*LVGTIP
Trigger: TGGTATTGTGCCCACCAGTCAGATCCTGTGTTTTGA...GGCTTTAATCACCAACCCATCAACATCAAGCCTCCCCCAGGCCGGTTCAAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR-3UTR GCA 90 bp ACAGGATCTGACTGGTGGGCACAATACCATCTTGAACGCCCACAAAAAGGTTTGTGTGGTCAACCTCAATaGCCTGCTCATGATGGCAGT +
Preference number: 2 (lower is better)
Translates to: TGSDWWAQYHLERPQKGLCGQPQ*PAHDGS
Trigger: ACTGCCATCATGAGCAGGGCATTGAGGTTGACCACA...CAAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGCCCACCAGTCAGATCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR-3UTR TCA 90 bp TTATTTGAACCGGCCTGGGGGAGGCTTGATGTTGATGGGTTGGTGATTAAAGCCGGCACAATACCATCTTaGACGCCCACAAAAAGGTTT +
Preference number: 2 (lower is better)
Translates to: LFEPAWGRLDVDGLVIKAGTIPS*TPTKRF
Trigger: AAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGCC...GGCTTTAATCACCAACCCATCAACATCAAGCCTCCCCCAGGCCGGTTCAAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR CCA 72 bp GCCAGGCGGCTGGAGGACATCAGCGAGGACCCGAGCTaGGCCCGTGTGGTCAACCTCAATGCCCTGCTCATG +
Preference number: 3 (lower is better)
Translates to: ARRLEDISEDPS*ARVVNLNALLM
Trigger: CATGAGCAGGGCATTGAGGTTGACCACACGGGCCCAGCTCGGGTCCTCGCTGATGTCCTCCAGCCGCCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000567994.5
ENST00000570164.5
3UTR CCA 72 bp CGGGAGGACCTGGAGGACATCAGCGAGGACCCGAGCTaGGCCCGTGTGGTCAACCTCAATGCCCTGCTCATG +
Preference number: 3 (lower is better)
Translates to: REDLEDISEDPS*ARVVNLNALLM
Trigger: CATGAGCAGGGCATTGAGGTTGACCACACGGGCCCAGCTCGGGTCCTCGCTGATGTCCTCCAGGTCCTCCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430477.6
3UTR CCA 72 bp TTGGCTGACACGTCAGCCATGTTGTTCCTCCGAGCCTaGTGCACGGTCAGGGCAGCCCGAGTGGCCCCACCA +
Preference number: 3 (lower is better)
Translates to: LADTSAMLFLRA*CTVRAARVAPP
Trigger: TGGTGGGGCCACTCGGGCTGCCCTGACCGTGCACCAGGCTCGGAGGAACAACATGGCTGACGTGTCAGCCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567578.1
3UTR GCA 72 bp GGTGGGGCTGGAGGAGCTGAGTTCCCGCAAACTAACTaGAGGGCCTCAATTTCCCTCAGAGCCCCAGGCCCC +
Preference number: 3 (lower is better)
Translates to: GGAGGAEFPQTN*RASISLRAPGP
Trigger: GGGGCCTGGGGCTCTGAGGGAAATTGAGGCCCTGCAGTTAGTTTGCGGGAACTCAGCTCCTCCAGCCCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
3UTR-3UTR CAA 90 bp ATGTTGTTCCTCCGAGCCTGGTGCACGGTCAGGGCAGCCCGAGTGGCCCCACCAACACTCACGATGCACTaGGCTAGGTTGCTGGTGGAG +
Preference number: 3 (lower is better)
Translates to: MLFLRAWCTVRAARVAPPTLTMH*ARLLVE
Trigger: CTCCACCAGCAACCTAGCCAAGTGCATCGTGAGTGT...TGGTGGGGCCACTCGGGCTGCCCTGACCGTGCACCAGGCTCGGAGGAACAACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567578.1
3UTR-3UTR CAA 90 bp CCTCCCCAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGCTAAGACCAACTGCGTaGGACACCATAAGCCACAGC +
Preference number: 3 (lower is better)
Translates to: PPQLHRLVFSLRHSKEERLRPTA*DTISHS
Trigger: GCTGTGGCTTATGGTGTCCAACGCAGTTGGTCTTAG...CCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTGGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR GCA 72 bp TGGGAGCACACAGGCACAGAACACTGTGAGCAGGACTaGCAGGCCAGTGTCACAAGCGCTACCATCTGGGTG +
Preference number: 3 (lower is better)
Translates to: WEHTGTEHCEQD*QASVTSATIWV
Trigger: CACCCAGATGGTAGCGCTTGTGACACTGGCCTGGCAGTCCTGCTCACAGTGTTCTGTGCCTGTGTGCTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR-3UTR CAA 90 bp GTGAGCAGGACTGCCAGGCCAGTGTCACAAGCGCTACCATCTGGGTGTAGACAGCTAAGACCAACTGCGTaGGACACCATAAGCCACAGC +
Preference number: 3 (lower is better)
Translates to: VSRTARPVSQALPSGCRQLRPTA*DTISHS
Trigger: GCTGTGGCTTATGGTGTCCAACGCAGTTGGTCTTAG...CTGTCTACACCCAGATGGTAGCGCTTGTGACACTGGCCTGGCAGTCCTGCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR-3UTR CAA 90 bp GTCAACCTCAATGCCCTGCTCATGATGGCAGTGGCCGTGTTCCTCTGGGGCTTCCTAAGACCAACTGCGTaGGACACCATAAGCCACAGC +
Preference number: 3 (lower is better)
Translates to: VNLNALLMMAVAVFLWGFLRPTA*DTISHS
Trigger: GCTGTGGCTTATGGTGTCCAACGCAGTTGGTCTTAG...GAAGCCCCAGAGGAACACGGCCACTGCCATCATGAGCAGGGCATTGAGGTTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
3UTR-3UTR CAA 90 bp AGGCCAACGGCTTTAAACACAAGCTCAGGGGCTTGGGGTTTATCCCGAGGGCACGTGCCTGCTCTGGTTTaGTGGAATGAGCAGAGGTGG +
Preference number: 3 (lower is better)
Translates to: RPTALNTSSGAWGLSRGHVPALV*WNEQRW
Trigger: CCACCTCTGCTCATTCCACAAAACCAGAGCAGGCAC...GTGCCCTCGGGATAAACCCCAAGCCCCTGAGCTTGTGTTTAAAGCCGTTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
3UTR GCA 72 bp CCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTaGGTTGGACACCATAAGCCACAGCCTCACAGGAAG +
Preference number: 3 (lower is better)
Translates to: PCSSGASMPKTN*VGHHKPQPHRK
Trigger: CTTCCTGTGAGGCTGTGGCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
3UTR CCA 72 bp GGGCACAATACCATCTTGAACGCCCACAAAAAGGTTTaGTTTTGTTGCCAAAGGGCAGGTGGCTCCAGGCAG +
Preference number: 3 (lower is better)
Translates to: GHNTILNAHKKV*FCCQRAGGSRQ
Trigger: CTGCCTGGAGCCACCTGCCCTTTGGCAACAAAACCAAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR CCA 72 bp ATGGCCTTTGGGACTCAAAACACAGGATCTGACTGGTaGGCACAATACCATCTTGAACGCCCACAAAAAGGT +
Preference number: 3 (lower is better)
Translates to: MAFGTQNTGSDW*AQYHLERPQKG
Trigger: ACCTTTTTGTGGGCGTTCAAGATGGTATTGTGCCCACCAGTCAGATCCTGTGTTTTGAGTCCCAAAGGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR CCA 72 bp TTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCATaGCCTTTGGGACTCAAAACACAGGATCTGACTGGT +
Preference number: 3 (lower is better)
Translates to: LVIKASQSQSLA*PLGLKTQDLTG
Trigger: ACCAGTCAGATCCTGTGTTTTGAGTCCCAAAGGCCATGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp AGCAGAGGTGGGGTGGGCAGTCCTCCGCCCCTTACCCAGGAGGAGGCAGCGGCATTCCTCCGAGCCTGGTaGACGGTCAGGGCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: SRGGVGSPPPLTQEEAAAFLRAW*TVRAAR
Trigger: TCGGGCTGCCCTGACCGTGCACCAGGCTCGGAGGAA...TGCCGCTGCCTCCTCCTGGGTAAGGGGCGGAGGACTGCCCACCCCACCTCTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp AGCAGAGGTGGGGTGGGCAGTCCTCCGCCCCTTACCCAGGAGGAGGCAGCGGCATTGTTCCTCCGAGCCTaGTGCACGGTCAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SRGGVGSPPPLTQEEAAALFLRA*CTVRAA
Trigger: GGCTGCCCTGACCGTGCACCAGGCTCGGAGGAACAA...TGCCGCTGCCTCCTCCTGGGTAAGGGGCGGAGGACTGCCCACCCCACCTCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp AGCAGAGGTGGGGTGGGCAGTCCTCCGCCCCTTACCCAGGAGGAGGCAGCGGCAGGACCGCGCGGTAGTTaGCGTAGATGTGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SRGGVGSPPPLTQEEAAAGPRGS*RRCGGQ
Trigger: CTGCCCTCCACATCTACGCCAACTACCGCGCGGTCC...TGCCGCTGCCTCCTCCTGGGTAAGGGGCGGAGGACTGCCCACCCCACCTCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000567994.5
ENST00000570164.5
CDS-3UTR TCA 90 bp CCTCCCCAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGCACAGGAAGTGGGGGTaGGGAGCCTGCGGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: PPQLHRLVFSLRHSKEERHRKWG*GACGAP
Trigger: GGGAGCACCGCAGGCTCCTCACCCCCACTTCCTGTG...CCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTGGGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp CAGGAGGCTGACCAAGAGCCCCGCCAGGTTCACCAGCGTCTCCTGGCTGCTGTCTTCCTCCGAGCCTGGTaGACGGTCAGGGCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: QEADQEPRQVHQRLLAAVFLRAW*TVRAAR
Trigger: TCGGGCTGCCCTGACCGTGCACCAGGCTCGGAGGAA...GACAGCAGCCAGGAGACGCTGGTGAACCTGGCGGGGCTCTTGGTCAGCCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565128.5
CDS-3UTR CCA 90 bp GCCAGGTTCACCAGCGTCTCCTGGCTGCTGTCCTTGGCTGACACGTCAGCCATGGGCAGGAACACGGCCTaGAGCCCGGAGAGGGGCGGT +
Preference number: 4 (lower is better)
Translates to: ARFTSVSWLLSLADTSAMGRNTA*SPERGG
Trigger: ACCGCCCCTCTCCGGGCTCCAGGCCGTGTTCCTGCC...CATGGCTGACGTGTCAGCCAAGGACAGCAGCCAGGAGACGCTGGTGAACCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567578.1
CDS-3UTR TCA 90 bp AGCAGAGGTGGGGTGGGCAGTCCTCCGCCCCTTACCCAGGAGGAGGCAGCGGCAGGTGGCCGTGGCAGCTaGAACAGTGGCTTTTGCGTT +
Preference number: 4 (lower is better)
Translates to: SRGGVGSPPPLTQEEAAAGGRGS*NSGFCV
Trigger: AACGCAAAAGCCACTGTTTCAGCTGCCACGGCCACC...TGCCGCTGCCTCCTCCTGGGTAAGGGGCGGAGGACTGCCCACCCCACCTCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000567994.5
ENST00000570164.5
CDS-3UTR TCA 90 bp AGGCTGACCAAGAGCCCCGCCAGGTTCACCAGCGTCTCCTGGCTGCTGTCCTTGGGAGCATCAGGAGGCTaGCCAAGAGCCCCGCCAGGT +
Preference number: 4 (lower is better)
Translates to: RLTKSPARFTSVSWLLSLGASGG*PRAPPG
Trigger: ACCTGGCGGGGCTCTTGGTCAGCCTCCTGATGCTCC...CAAGGACAGCAGCCAGGAGACGCTGGTGAACCTGGCGGGGCTCTTGGTCAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565128.5
CDS-3UTR TCA 90 bp CCTCCCCAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGGAGCATCAGGAGGCTaGCCAAGAGCCCCGCCAGGT +
Preference number: 4 (lower is better)
Translates to: PPQLHRLVFSLRHSKEERGASGG*PRAPPG
Trigger: ACCTGGCGGGGCTCTTGGTCAGCCTCCTGATGCTCC...CCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTGGGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp AGGCTGACCAAGAGCCCCGCCAGGTTCACCAGCGTCTCCTGGCTGCTGTCCTTGTCCCCGGAGCCGAACTaGTCGGAACACAGCGGGGTC +
Preference number: 4 (lower is better)
Translates to: RLTKSPARFTSVSWLLSLSPEPN*SEHSGV
Trigger: GACCCCGCTGTGTTCCGAGCAGTTCGGCTCCGGGGA...CAAGGACAGCAGCCAGGAGACGCTGGTGAACCTGGCGGGGCTCTTGGTCAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000565128.5
ENST00000567578.1
CDS-3UTR GCA 90 bp CCTCCCCAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGTTCCTCCGAGCCTGGTaGACGGTCAGGGCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: PPQLHRLVFSLRHSKEERFLRAW*TVRAAR
Trigger: TCGGGCTGCCCTGACCGTGCACCAGGCTCGGAGGAA...CCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTGGGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp AGCAGAGGTGGGGTGGGCAGTCCTCCGCCCCTTACCCAGGAGGAGGCAGCGGCATCCACAGCGGCTCCATaGGATTGGCTGCAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: SRGGVGSPPPLTQEEAAASTAAP*DWLQLG
Trigger: ACCCAACTGCAGCCAATCGCATGGAGCCGCTGTGGA...TGCCGCTGCCTCCTCCTGGGTAAGGGGCGGAGGACTGCCCACCCCACCTCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000567994.5
ENST00000570164.5
CDS-3UTR GCA 90 bp AGCAGAGGTGGGGTGGGCAGTCCTCCGCCCCTTACCCAGGAGGAGGCAGCGGCACTCTTTCTTAGGACCTaGCCGCACCCGGTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: SRGGVGSPPPLTQEEAAALFLRT*PHPVPQ
Trigger: CTGAGGAACCGGGTGCGGGCAGGTCCTAAGAAAGAG...TGCCGCTGCCTCCTCCTGGGTAAGGGGCGGAGGACTGCCCACCCCACCTCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000567994.5
ENST00000570164.5
CDS-3UTR GCA 90 bp AGCAGAGGTGGGGTGGGCAGTCCTCCGCCCCTTACCCAGGAGGAGGCAGCGGCACACTGTGAGCAGGACTaGCAGGCCAGTGTCACAAGC +
Preference number: 4 (lower is better)
Translates to: SRGGVGSPPPLTQEEAAAHCEQD*QASVTS
Trigger: GCTTGTGACACTGGCCTGGCAGTCCTGCTCACAGTG...TGCCGCTGCCTCCTCCTGGGTAAGGGGCGGAGGACTGCCCACCCCACCTCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
CDS-3UTR GCA 90 bp GTCAACCTCAATGCCCTGCTCATGATGGCAGTGGCCGTGTTCCTCTGGGGCTTCGGGAAGCCCTCCCACTaGAGGCTCCCGTCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: VNLNALLMMAVAVFLWGFGKPSH*RLPSAA
Trigger: CGCCGCGGACGGGAGCCTGCAGTGGGAGGGCTTCCC...GAAGCCCCAGAGGAACACGGCCACTGCCATCATGAGCAGGGCATTGAGGTTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567994.5
CDS-3UTR CCA 90 bp CCTCCCCAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGCCCAGCAAGACTGCCTaGGTGGCTAGGGAGCCGGAG +
Preference number: 4 (lower is better)
Translates to: PPQLHRLVFSLRHSKEERPSKTA*VAREPE
Trigger: CTCCGGCTCCCTAGCCACCCAGGCAGTCTTGCTGGG...CCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTGGGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp GCTGACCAAGAGCCCCGCCAGGTTCACCAGCGTCTCCTGGCTGCTGTCCTTGGCTTGTTCCTCCGAGCCTaGTGCACGGTCAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: ADQEPRQVHQRLLAAVLGLFLRA*CTVRAA
Trigger: GGCTGCCCTGACCGTGCACCAGGCTCGGAGGAACAA...GCCAAGGACAGCAGCCAGGAGACGCTGGTGAACCTGGCGGGGCTCTTGGTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565128.5
ENST00000567578.1
CDS-3UTR CCA 90 bp AGCAGAGGTGGGGTGGGCAGTCCTCCGCCCCTTACCCAGGAGGAGGCAGCGGCACCTGGCTGCTGTCCTTaGCTGACACGTCAGCCATGT +
Preference number: 4 (lower is better)
Translates to: SRGGVGSPPPLTQEEAAAPGCCP*LTRQPC
Trigger: ACATGGCTGACGTGTCAGCCAAGGACAGCAGCCAGG...TGCCGCTGCCTCCTCCTGGGTAAGGGGCGGAGGACTGCCCACCCCACCTCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp AGCAGAGGTGGGGTGGGCAGTCCTCCGCCCCTTACCCAGGAGGAGGCAGCGGCAGCATCAGCCCATGTGTaGCGGCCCTTAGGATGGTCT +
Preference number: 4 (lower is better)
Translates to: SRGGVGSPPPLTQEEAAAASAHV*RPLGWS
Trigger: AGACCATCCTAAGGGCCGCCACACATGGGCTGATGC...TGCCGCTGCCTCCTCCTGGGTAAGGGGCGGAGGACTGCCCACCCCACCTCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp CTCCCCAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGCAGCAGCCAGGCGGCTaGAGGACATCAGCGAGGACC +
Preference number: 4 (lower is better)
Translates to: LPSSTAWSSVSGIARRNGQQPGG*RTSART
Trigger: GGTCCTCGCTGATGTCCTCCAGCCGCCTGGCTGCTG...CCCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTGGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
CDS-3UTR CCA 90 bp AGCAGAGGTGGGGTGGGCAGTCCTCCGCCCCTTACCCAGGAGGAGGCAGCGGCACTGATGGTGGCAGGGTaGGGTGAGGACAGGACAAGA +
Preference number: 4 (lower is better)
Translates to: SRGGVGSPPPLTQEEAAALMVAG*GEDRTR
Trigger: TCTTGTCCTGTCCTCACCCCACCCTGCCACCATCAG...TGCCGCTGCCTCCTCCTGGGTAAGGGGCGGAGGACTGCCCACCCCACCTCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
CDS-3UTR TCA 90 bp ATGTTGTTCCTCCGAGCCTGGTGCACGGTCAGGGCAGCCCGAGTGGCCCCACCAGCAAGTAGTCCGGGCTaGCGCTATCAGGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: MLFLRAWCTVRAARVAPPASSPG*RYQGSP
Trigger: AGGGCTTCCCTGATAGCGTCAGCCCGGACTACTTGC...TGGTGGGGCCACTCGGGCTGCCCTGACCGTGCACCAGGCTCGGAGGAACAACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567578.1
CDS-3UTR TCA 90 bp GCTGACCAAGAGCCCCGCCAGGTTCACCAGCGTCTCCTGGCTGCTGTCCTTGGCGAAGCCAGGGCAACCTaGCACCAGAGGGAGCATCAG +
Preference number: 4 (lower is better)
Translates to: ADQEPRQVHQRLLAAVLGEARAT*HQREHQ
Trigger: CTGATGCTCCCTCTGGTGTCAGGTTGCCCTGGCTTC...GCCAAGGACAGCAGCCAGGAGACGCTGGTGAACCTGGCGGGGCTCTTGGTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565128.5
CDS-3UTR GCA 90 bp GCCCGAGTGGCCCCACCAGCAACACTCACGATGCACTTGGCTAGGTTGCTGGTGTCCCCGGAGCCGAACTaGTCGGAACACAGCGGGGTC +
Preference number: 4 (lower is better)
Translates to: ARVAPPATLTMHLARLLVSPEPN*SEHSGV
Trigger: GACCCCGCTGTGTTCCGAGCAGTTCGGCTCCGGGGA...CACCAGCAACCTAGCCAAGTGCATCGTGAGTGTTGCTGGTGGGGCCACTCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567578.1
CDS-3UTR GCA 90 bp TTCCCCTGTCCTGCTGTGGCCAAAGTGTCCTTGCTCCAGGTTCCTGCCCTGGGCTCCCCGGAGCCGAACTaGTCGGAACACAGCGGGGTC +
Preference number: 4 (lower is better)
Translates to: FPCPAVAKVSLLQVPALGSPEPN*SEHSGV
Trigger: GACCCCGCTGTGTTCCGAGCAGTTCGGCTCCGGGGA...GCCCAGGGCAGGAACCTGGAGCAAGGACACTTTGGCCACAGCAGGACAGGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR GCA 90 bp CTCCCCAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGCGTTCCCCACCCCTATaGCCAGCAAGACTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: LPSSTAWSSVSGIARRNGRSPPL*PARLPG
Trigger: CCCAGGCAGTCTTGCTGGGCATAGGGGTGGGGAACG...CCCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp AGCAGAGGTGGGGTGGGCAGTCCTCCGCCCCTTACCCAGGAGGAGGCAGCGGCATGCACTTGGCTAGGTTaGTGGTGGAGACGGTCATGG +
Preference number: 4 (lower is better)
Translates to: SRGGVGSPPPLTQEEAAACTWLG*WWRRSW
Trigger: CCATGACCGTCTCCACCAGCAACCTAGCCAAGTGCA...TGCCGCTGCCTCCTCCTGGGTAAGGGGCGGAGGACTGCCCACCCCACCTCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000567994.5
ENST00000570164.5
CDS-3UTR GCA 90 bp AGCAGAGGTGGGGTGGGCAGTCCTCCGCCCCTTACCCAGGAGGAGGCAGCGGCACTCCATGCGATTGGCTaGAGTTGGGTCGAGTACCTC +
Preference number: 4 (lower is better)
Translates to: SRGGVGSPPPLTQEEAAALHAIG*SWVEYL
Trigger: GAGGTACTCGACCCAACTGCAGCCAATCGCATGGAG...TGCCGCTGCCTCCTCCTGGGTAAGGGGCGGAGGACTGCCCACCCCACCTCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp CAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGAGGACGCAAGACTGCCTGGGTaGCTAGGGAGCCGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: QLHRLVFSLRHSKEEREDARLPG*LGSRRG
Trigger: GCCTCTCCGGCTCCCTAGCCACCCAGGCAGTCTTGC...GTCCTCCCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp AGCAGAGGTGGGGTGGGCAGTCCTCCGCCCCTTACCCAGGAGGAGGCAGCGGCATGGCAGCTGAAACAGTaGCTTTTGCGTTCCCCACCC +
Preference number: 4 (lower is better)
Translates to: SRGGVGSPPPLTQEEAAAWQLKQ*LLRSPP
Trigger: GGGTGGGGAACGCAAAAGCCACTGTTTCAGCTGCCA...TGCCGCTGCCTCCTCCTGGGTAAGGGGCGGAGGACTGCCCACCCCACCTCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp CAGCCATGTTGTTCCTCCGAGCCTGGTGCACGGTCAGGGCAGCCCGAGTGGCCCTTCACCAGCGTCTCCTaGCTGCTGTCCTTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: QPCCSSEPGARSGQPEWPFTSVS*LLSLAD
Trigger: GTCAGCCAAGGACAGCAGCCAGGAGACGCTGGTGAA...GGGCCACTCGGGCTGCCCTGACCGTGCACCAGGCTCGGAGGAACAACATGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567578.1
CDS-3UTR CCA 90 bp TTCCCCTGTCCTGCTGTGGCCAAAGTGTCCTTGCTCCAGGTTCCTGCCCTGGGCCTTCCCATGAGGGCCTaGCCCACCCGCTGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: FPCPAVAKVSLLQVPALGLPMRA*PTRCSC
Trigger: GCAACTGCAGCGGGTGGGCCAGGCCCTCATGGGAAG...GCCCAGGGCAGGAACCTGGAGCAAGGACACTTTGGCCACAGCAGGACAGGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp TTCCCCTGTCCTGCTGTGGCCAAAGTGTCCTTGCTCCAGGTTCCTGCCCTGGGCAGCGAGGACCCGAGCTaGGCCCGTGTGGTCAACCTC +
Preference number: 4 (lower is better)
Translates to: FPCPAVAKVSLLQVPALGSEDPS*ARVVNL
Trigger: GAGGTTGACCACACGGGCCCAGCTCGGGTCCTCGCT...GCCCAGGGCAGGAACCTGGAGCAAGGACACTTTGGCCACAGCAGGACAGGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
3UTR CAA 72 bp TCCTGGCTGCTGTCCTTGGCTGACACGTCAGCCATGTaGTTCCTCCGAGCCTGGTGCACGGTCAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SWLLSLADTSAM*FLRAWCTVRAA
Trigger: GGCTGCCCTGACCGTGCACCAGGCTCGGAGGAACAACATGGCTGACGTGTCAGCCAAGGACAGCAGCCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567578.1
CDS-3UTR TCA 90 bp CCTCCCCAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGCAAGTAGTCCGGGCTaGCGCTATCAGGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: PPQLHRLVFSLRHSKEERASSPG*RYQGSP
Trigger: AGGGCTTCCCTGATAGCGTCAGCCCGGACTACTTGC...CCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTGGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR TCA 90 bp CTGACCAAGAGCCCCGCCAGGTTCACCAGCGTCTCCTGGCTGCTGTCCTTGGCTGCAAGTAGTCCGGGCTaGCGCTATCAGGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: LTKSPARFTSVSWLLSLAASSPG*RYQGSP
Trigger: AGGGCTTCCCTGATAGCGTCAGCCCGGACTACTTGC...AGCCAAGGACAGCAGCCAGGAGACGCTGGTGAACCTGGCGGGGCTCTTGGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565128.5
ENST00000567578.1
CDS-3UTR GCA 90 bp AGCAGAGGTGGGGTGGGCAGTCCTCCGCCCCTTACCCAGGAGGAGGCAGCGGCACGATGCGGCCCAGCATaGCAGTTGAATCTTTCACGA +
Preference number: 4 (lower is better)
Translates to: SRGGVGSPPPLTQEEAAARCGPA*QLNLSR
Trigger: TCGTGAAAGATTCAACTGGCATGCTGGGCCGCATCG...TGCCGCTGCCTCCTCCTGGGTAAGGGGCGGAGGACTGCCCACCCCACCTCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000567994.5
ENST00000570164.5
CDS-3UTR GCA 90 bp CCTCCCCAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGCCAGCGTCTCCTGGCTaGTGTCCTTGGCTGACACGT +
Preference number: 4 (lower is better)
Translates to: PPQLHRLVFSLRHSKEERPASPG*CPWLTR
Trigger: ACGTGTCAGCCAAGGACAGCAGCCAGGAGACGCTGG...CCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTGGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp CTCCCCAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGCCAGCGTCTCCTGGCTaGTGTCCTTGGCTGACACGT +
Preference number: 4 (lower is better)
Translates to: LPSSTAWSSVSGIARRNGPASPG*CPWLTR
Trigger: ACGTGTCAGCCAAGGACAGCAGCCAGGAGACGCTGG...CCCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp AGCAGAGGTGGGGTGGGCAGTCCTCCGCCCCTTACCCAGGAGGAGGCAGCGGCAGATGGTCTTGGGGCCTaGCTTCTGGTTCAGAACTAC +
Preference number: 4 (lower is better)
Translates to: SRGGVGSPPPLTQEEAAADGLGA*LLVQNY
Trigger: GTAGTTCTGAACCAGAAGGCAGGCCCCAAGACCATC...TGCCGCTGCCTCCTCCTGGGTAAGGGGCGGAGGACTGCCCACCCCACCTCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000567994.5
ENST00000570164.5
CDS-3UTR GCA 90 bp CAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGAGGACAGGGGTCCATCTCCCTaGAGGGCCCCAAGCATCAGC +
Preference number: 4 (lower is better)
Translates to: QLHRLVFSLRHSKEEREDRGPSP*RAPSIS
Trigger: GCTGATGCTTGGGGCCCTGCAGGGAGATGGACCCCT...GTCCTCCCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp TTCCCCTGTCCTGCTGTGGCCAAAGTGTCCTTGCTCCAGGTTCCTGCCCTGGGCGGACCGCGCGGTAGTTaGCGTAGATGTGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: FPCPAVAKVSLLQVPALGGPRGS*RRCGGQ
Trigger: CTGCCCTCCACATCTACGCCAACTACCGCGCGGTCC...GCCCAGGGCAGGAACCTGGAGCAAGGACACTTTGGCCACAGCAGGACAGGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp CTCCCCAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGGCTTGGGCCTCCGTCTaGGCTGCTCACAAGACCTTC +
Preference number: 4 (lower is better)
Translates to: LPSSTAWSSVSGIARRNGAWASV*AAHKTF
Trigger: GAAGGTCTTGTGAGCAGCCCAGACGGAGGCCCAAGC...CCCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp GCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGAGGACCTGGAGGACAAGCGAGGACCCGAGCTaGGCCCGTGTGGTCAACCTC +
Preference number: 4 (lower is better)
Translates to: AWSSVSGIARRNGRTWRTSEDPS*ARVVNL
Trigger: GAGGTTGACCACACGGGCCCAGCTCGGGTCCTCGCT...TGTCCTCCAGGTCCTCCCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430477.6
CDS-3UTR CCA 90 bp AGCAGAGGTGGGGTGGGCAGTCCTCCGCCCCTTACCCAGGAGGAGGCAGCGGCACCCAAAGCCAATCCTTaGCATGGCCTTTGGGACTCA +
Preference number: 4 (lower is better)
Translates to: SRGGVGSPPPLTQEEAAAPKANP*HGLWDS
Trigger: TGAGTCCCAAAGGCCATGCCAAGGATTGGCTTTGGG...TGCCGCTGCCTCCTCCTGGGTAAGGGGCGGAGGACTGCCCACCCCACCTCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
CDS-3UTR TCA 90 bp GTCAACCTCAATGCCCTGCTCATGATGGCAGTGGCCGTGTTCCTCTGGGGCTTCGGAGCATCAGGAGGCTaGCCAAGAGCCCCGCCAGGT +
Preference number: 4 (lower is better)
Translates to: VNLNALLMMAVAVFLWGFGASGG*PRAPPG
Trigger: ACCTGGCGGGGCTCTTGGTCAGCCTCCTGATGCTCC...GAAGCCCCAGAGGAACACGGCCACTGCCATCATGAGCAGGGCATTGAGGTTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR TCA 90 bp GTCAACCTCAATGCCCTGCTCATGATGGCAGTGGCCGTGTTCCTCTGGGGCTTCCGTTCAAGGTCTCCATaGCCAGGGCTCGGACCGCGC +
Preference number: 4 (lower is better)
Translates to: VNLNALLMMAVAVFLWGFRSRSP*PGLGPR
Trigger: GCGCGGTCCGAGCCCTGGTCATGGAGACCTTGAACG...GAAGCCCCAGAGGAACACGGCCACTGCCATCATGAGCAGGGCATTGAGGTTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR TCA 90 bp CCTCCCCAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGTCAATGCCCTGCTCATaGTGGCAGTGGCCGTGTTCC +
Preference number: 4 (lower is better)
Translates to: PPQLHRLVFSLRHSKEERSMPCS*WQWPCS
Trigger: GGAACACGGCCACTGCCATCATGAGCAGGGCATTGA...CCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTGGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp CCGTGTGGTCAACCTCAATGCCCTGCTCATGATGGCAGTGGCCGTGTTCCTCTGTCCCCGGAGCCGAACTaGTCGGAACACAGCGGGGTC +
Preference number: 4 (lower is better)
Translates to: PCGQPQCPAHDGSGRVPLSPEPN*SEHSGV
Trigger: GACCCCGCTGTGTTCCGAGCAGTTCGGCTCCGGGGA...CAGAGGAACACGGCCACTGCCATCATGAGCAGGGCATTGAGGTTGACCACACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR GCA 90 bp CTCCCCAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGACCAGGCAAAGACGATaGGGCCCAGCATGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: LPSSTAWSSVSGIARRNGTRQRR*GPACQL
Trigger: CAACTGGCATGCTGGGCCGCATCGTCTTTGCCTGGT...CCCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp TTCCCCTGTCCTGCTGTGGCCAAAGTGTCCTTGCTCCAGGTTCCTGCCCTGGGCCAGCTCCTCCAGCTCTaGTGGAAGGGGTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: FPCPAVAKVSLLQVPALGQLLQL*WKGSIS
Trigger: GGAGATGGACCCCTTCCAGCAGAGCTGGAGGAGCTG...GCCCAGGGCAGGAACCTGGAGCAAGGACACTTTGGCCACAGCAGGACAGGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR GCA 90 bp CCTCCCCAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGTCCACCTCTAGCTGGTaGTTCTCGGTCTTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: PPQLHRLVFSLRHSKEERSTSSW*FSVFQP
Trigger: CGGCTGGAAGACCGAGAAGCACCAGCTAGAGGTGGA...CCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTGGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp AGGCTGACCAAGAGCCCCGCCAGGTTCACCAGCGTCTCCTGGCTGCTGTCCTTGCGATGCGGCCCAGCATaGCAGTTGAATCTGCACGGA +
Preference number: 4 (lower is better)
Translates to: RLTKSPARFTSVSWLLSLRCGPA*QLNLHG
Trigger: TCCGTGCAGATTCAACTGGCATGCTGGGCCGCATCG...CAAGGACAGCAGCCAGGAGACGCTGGTGAACCTGGCGGGGCTCTTGGTCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565128.5
ENST00000567578.1
CDS-3UTR CCA 90 bp GGCGTAGATGTGGAGGGCAGTGAGGAAGAAGAAACATCCAAGGCTGAAGCCAGGGGCAGGAACACGGCCTaGAGCCCGGAGAGGGGCGGT +
Preference number: 4 (lower is better)
Translates to: GVDVEGSEEEETSKAEARGRNTA*SPERGG
Trigger: ACCGCCCCTCTCCGGGCTCCAGGCCGTGTTCCTGCC...CCTGGCTTCAGCCTTGGATGTTTCTTCTTCCTCACTGCCCTCCACATCTACGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565128.5
CDS-3UTR CCA 90 bp AGCAGGACTGCCAGGCCAGTGTCACAAGCGCTACCATCTGGGTGTAGACAGACCGGGAGCCGGAGAGGCTaGAAGCAAACGCCTGCACGG +
Preference number: 4 (lower is better)
Translates to: SRTARPVSQALPSGCRQTGSRRG*KQTPAR
Trigger: CCGTGCAGGCGTTTGCTTCCAGCCTCTCCGGCTCCC...GGTCTGTCTACACCCAGATGGTAGCGCTTGTGACACTGGCCTGGCAGTCCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp GTCAACCTCAATGCCCTGCTCATGATGGCAGTGGCCGTGTTCCTCTGGGGCTTCCCCAGCAAGACTGCCTaGGTGGCTAGGGAGCCGGAG +
Preference number: 4 (lower is better)
Translates to: VNLNALLMMAVAVFLWGFPSKTA*VAREPE
Trigger: CTCCGGCTCCCTAGCCACCCAGGCAGTCTTGCTGGG...GAAGCCCCAGAGGAACACGGCCACTGCCATCATGAGCAGGGCATTGAGGTTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp CAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGAGGACCTCCTCCAGCTCTGCTaGAAGGGGTCCATCTCCCTG +
Preference number: 4 (lower is better)
Translates to: QLHRLVFSLRHSKEEREDLLQLC*KGSISL
Trigger: CAGGGAGATGGACCCCTTCCAGCAGAGCTGGAGGAG...GTCCTCCCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp TCCCCTGTCCTGCTGTGGCCAAAGTGTCCTTGCTCCAGGTTCCTGCCCTGGGCTGCTTGGGCCTCCGTCTaGGCTGCTCACAAGACCTTC +
Preference number: 4 (lower is better)
Translates to: SPVLLWPKCPCSRFLPWAAWASV*AAHKTF
Trigger: GAAGGTCTTGTGAGCAGCCCAGACGGAGGCCCAAGC...AGCCCAGGGCAGGAACCTGGAGCAAGGACACTTTGGCCACAGCAGGACAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp TTCCCCTGTCCTGCTGTGGCCAAAGTGTCCTTGCTCCAGGTTCCTGCCCTGGGCCGGCCTTCCTCTGCCTaGGGCCCACTGCATCTGATT +
Preference number: 4 (lower is better)
Translates to: FPCPAVAKVSLLQVPALGRPSSA*GPLHLI
Trigger: AATCAGATGCAGTGGGCCCCAGGCAGAGGAAGGCCG...GCCCAGGGCAGGAACCTGGAGCAAGGACACTTTGGCCACAGCAGGACAGGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp GTCAACCTCAATGCCCTGCTCATGATGGCAGTGGCCGTGTTCCTCTGGGGCTTCAGCGAGGACCCGAGCTaGGCCCGTGTGGTCAACCTC +
Preference number: 4 (lower is better)
Translates to: VNLNALLMMAVAVFLWGFSEDPS*ARVVNL
Trigger: GAGGTTGACCACACGGGCCCAGCTCGGGTCCTCGCT...GAAGCCCCAGAGGAACACGGCCACTGCCATCATGAGCAGGGCATTGAGGTTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp GGTGTGGAAGGATGGCCGGGTTTCTGCAGCAGCAGGAGGAAAGGGTGGGAGCACCTGGGTGTGGAAGGATaGCCGGGTTTCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GVEGWPGFCSSRRKGWEHLGVEG*PGFCSS
Trigger: GCTGCTGCAGAAACCCGGCCATCCTTCCACACCCAG...GTGCTCCCACCCTTTCCTCCTGCTGCTGCAGAAACCCGGCCATCCTTCCACACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR TCA 90 bp CCTCCCCAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGCCCAGCATGCCAGTTaGATCTTTCACGAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: PPQLHRLVFSLRHSKEERAQHAS*IFHEPG
Trigger: ACCTGGCTCGTGAAAGATTCAACTGGCATGCTGGGC...CCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTGGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR TCA 90 bp AGGCTGACCAAGAGCCCCGCCAGGTTCACCAGCGTCTCCTGGCTGCTGTCCTTGGCTGCTGTCCTTGGCTaGCACGTCAGCCATGTTGTT +
Preference number: 4 (lower is better)
Translates to: RLTKSPARFTSVSWLLSLAAVLG*HVSHVV
Trigger: AACAACATGGCTGACGTGTCAGCCAAGGACAGCAGC...CAAGGACAGCAGCCAGGAGACGCTGGTGAACCTGGCGGGGCTCTTGGTCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565128.5
ENST00000567578.1
CDS-3UTR TCA 90 bp CTCCCCAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGGCTGCTGTCCTTGGCTaGCACGTCAGCCATGTTGTT +
Preference number: 4 (lower is better)
Translates to: LPSSTAWSSVSGIARRNGAAVLG*HVSHVV
Trigger: AACAACATGGCTGACGTGTCAGCCAAGGACAGCAGC...CCCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR TCA 90 bp GCTGACCAAGAGCCCCGCCAGGTTCACCAGCGTCTCCTGGCTGCTGTCCTTGGCAGAAACATCCAAGGCTaGAGCCAGGGCAACCTGACA +
Preference number: 4 (lower is better)
Translates to: ADQEPRQVHQRLLAAVLGRNIQG*SQGNLT
Trigger: TGTCAGGTTGCCCTGGCTTCAGCCTTGGATGTTTCT...GCCAAGGACAGCAGCCAGGAGACGCTGGTGAACCTGGCGGGGCTCTTGGTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565128.5
CDS-3UTR TCA 90 bp CTCCCCAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGCTGTACCTGGTTTTGTaGCTGGTCCCAGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: LPSSTAWSSVSGIARRNGLYLVL*LVPAEE
Trigger: CTCCTCTGCTGGGACCAGTCACAAAACCAGGTACAG...CCCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR TCA 90 bp CCTCCCCAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGCTTCGTGTGTCTCCTTaGCGACGACCCAGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: PPQLHRLVFSLRHSKEERLRVSP*RRPSSL
Trigger: AAGAGAGCTGGGTCGTCGTCAAGGAGACACACGAAG...CCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTGGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR TCA 90 bp CTCCCCAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGCTTCGTGTGTCTCCTTaGCGACGACCCAGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: LPSSTAWSSVSGIARRNGLRVSP*RRPSSL
Trigger: AAGAGAGCTGGGTCGTCGTCAAGGAGACACACGAAG...CCCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR TCA 90 bp TTCCCCTGTCCTGCTGTGGCCAAAGTGTCCTTGCTCCAGGTTCCTGCCCTGGGCGGGGCCCACTGCATCTaGTTGGCAGTCACTTCCCAT +
Preference number: 4 (lower is better)
Translates to: FPCPAVAKVSLLQVPALGGAHCI*LAVTSH
Trigger: ATGGGAAGTGACTGCCAATCAGATGCAGTGGGCCCC...GCCCAGGGCAGGAACCTGGAGCAAGGACACTTTGGCCACAGCAGGACAGGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR TCA 90 bp GGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATACACAGGAAGTGGGGGTaGGGAGCCTGCGGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: GRVPLGLLCLRPTALDTIHRKWG*GACGAP
Trigger: GGGAGCACCGCAGGCTCCTCACCCCCACTTCCTGTG...TATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR TCA 90 bp TCCCCTGTCCTGCTGTGGCCAAAGTGTCCTTGCTCCAGGTTCCTGCCCTGGGCTAGGGTGGAGTTGGCATaGGTTAAGCCTGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: SPVLLWPKCPCSRFLPWARVELA*VKPGLG
Trigger: ACCCAGCCCAGGCTTAACTCATGCCAACTCCACCCT...AGCCCAGGGCAGGAACCTGGAGCAAGGACACTTTGGCCACAGCAGGACAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp GTCAACCTCAATGCCCTGCTCATGATGGCAGTGGCCGTGTTCCTCTGGGGCTTCCGTTCCCCACCCCTATaGCCAGCAAGACTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: VNLNALLMMAVAVFLWGFRSPPL*PARLPG
Trigger: CCCAGGCAGTCTTGCTGGGCATAGGGGTGGGGAACG...GAAGCCCCAGAGGAACACGGCCACTGCCATCATGAGCAGGGCATTGAGGTTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR GCA 90 bp GGTGTGGAAGGATGGCCGGGTTTCTGCAGCAGCAGGAGGAAAGGGTGGGAGCACACCAGGCAAAGACGATaGGGCCCAGCATGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: GVEGWPGFCSSRRKGWEHTRQRR*GPACQL
Trigger: CAACTGGCATGCTGGGCCGCATCGTCTTTGCCTGGT...GTGCTCCCACCCTTTCCTCCTGCTGCTGCAGAAACCCGGCCATCCTTCCACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp GCCCGAGTGGCCCCACCAGCAACACTCACGATGCACTTGGCTAGGTTGCTGGTGACCAGGCAAAGACGATaGGGCCCAGCATGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: ARVAPPATLTMHLARLLVTRQRR*GPACQL
Trigger: CAACTGGCATGCTGGGCCGCATCGTCTTTGCCTGGT...CACCAGCAACCTAGCCAAGTGCATCGTGAGTGTTGCTGGTGGGGCCACTCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567578.1
CDS-3UTR GCA 90 bp TTCCCCTGTCCTGCTGTGGCCAAAGTGTCCTTGCTCCAGGTTCCTGCCCTGGGCACCAGGCAAAGACGATaGGGCCCAGCATGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: FPCPAVAKVSLLQVPALGTRQRR*GPACQL
Trigger: CAACTGGCATGCTGGGCCGCATCGTCTTTGCCTGGT...GCCCAGGGCAGGAACCTGGAGCAAGGACACTTTGGCCACAGCAGGACAGGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR GCA 90 bp CAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGAGGACACCAGGCAAAGACGATaGGGCCCAGCATGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: QLHRLVFSLRHSKEEREDTRQRR*GPACQL
Trigger: CAACTGGCATGCTGGGCCGCATCGTCTTTGCCTGGT...GTCCTCCCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp CAGCCATGTTGTTCCTCCGAGCCTGGTGCACGGTCAGGGCAGCCCGAGTGGCCCCATTGCAGTCCAGTTTaGTCCCTTTCCACCAGGCAA +
Preference number: 4 (lower is better)
Translates to: QPCCSSEPGARSGQPEWPHCSPV*SLSTRQ
Trigger: TTGCCTGGTGGAAAGGGAGCAAACTGGACTGCAATG...GGGCCACTCGGGCTGCCCTGACCGTGCACCAGGCTCGGAGGAACAACATGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567578.1
CDS-3UTR GCA 90 bp ACTGTGAGCAGGACTGCCAGGCCAGTGTCACAAGCGCTACCATCTGGGTGTAGATTCCTCCGAGCCTGGTaGACGGTCAGGGCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: TVSRTARPVSQALPSGCRFLRAW*TVRAAR
Trigger: TCGGGCTGCCCTGACCGTGCACCAGGCTCGGAGGAA...TCTACACCCAGATGGTAGCGCTTGTGACACTGGCCTGGCAGTCCTGCTCACAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp GTCAACCTCAATGCCCTGCTCATGATGGCAGTGGCCGTGTTCCTCTGGGGCTTCAGGGGTCCATCTCCCTaGAGGGCCCCAAGCATCAGC +
Preference number: 4 (lower is better)
Translates to: VNLNALLMMAVAVFLWGFRGPSP*RAPSIS
Trigger: GCTGATGCTTGGGGCCCTGCAGGGAGATGGACCCCT...GAAGCCCCAGAGGAACACGGCCACTGCCATCATGAGCAGGGCATTGAGGTTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR GCA 90 bp CAGGGCAGCCATGTAGGGTGGAGTTGGCATGAGTTAAGCCTGGGCTGGGTGTGTAGGGGTCCATCTCCCTaGAGGGCCCCAAGCATCAGC +
Preference number: 4 (lower is better)
Translates to: QGSHVGWSWHELSLGWVCRGPSP*RAPSIS
Trigger: GCTGATGCTTGGGGCCCTGCAGGGAGATGGACCCCT...ACACACCCAGCCCAGGCTTAACTCATGCCAACTCCACCCTACATGGCTGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp CAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGAGGACTCCACCTCTAGCTGGTaGTTCTCGGTCTTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: QLHRLVFSLRHSKEEREDSTSSW*FSVFQP
Trigger: CGGCTGGAAGACCGAGAAGCACCAGCTAGAGGTGGA...GTCCTCCCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp TTCCCCTGTCCTGCTGTGGCCAAAGTGTCCTTGCTCCAGGTTCCTGCCCTGGGCGCCTGGCCCACCCGCTaGAGTTGCCCTAAGGAAAAA +
Preference number: 4 (lower is better)
Translates to: FPCPAVAKVSLLQVPALGAWPTR*SCPKEK
Trigger: TTTTTCCTTAGGGCAACTGCAGCGGGTGGGCCAGGC...GCCCAGGGCAGGAACCTGGAGCAAGGACACTTTGGCCACAGCAGGACAGGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR GCA 90 bp GGTGTGGAAGGATGGCCGGGTTTCTGCAGCAGCAGGAGGAAAGGGTGGGAGCACCACTGTGAGCAGGACTaGCAGGCCAGTGTCACAAGC +
Preference number: 4 (lower is better)
Translates to: GVEGWPGFCSSRRKGWEHHCEQD*QASVTS
Trigger: GCTTGTGACACTGGCCTGGCAGTCCTGCTCACAGTG...GTGCTCCCACCCTTTCCTCCTGCTGCTGCAGAAACCCGGCCATCCTTCCACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp GTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCCACGGCAGGAACACGGCCTaGAGCCCGGAGAGGGGCGGT +
Preference number: 4 (lower is better)
Translates to: VPLGLLCLRPTALDTISHGRNTA*SPERGG
Trigger: ACCGCCCCTCTCCGGGCTCCAGGCCGTGTTCCTGCC...GTGGCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp CGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCGGCAGGAACACGGCCTaGAGCCCGGAGAGGGGCGGT +
Preference number: 4 (lower is better)
Translates to: RVPLGLLCLRPTALDTISGRNTA*SPERGG
Trigger: ACCGCCCCTCTCCGGGCTCCAGGCCGTGTTCCTGCC...GCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp CATGATGGCAGTGGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGGCAAGACTGCCTGGGTaGCTAGGGAGCCGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: HDGSGRVPLGLLCLRPTAARLPG*LGSRRG
Trigger: GCCTCTCCGGCTCCCTAGCCACCCAGGCAGTCTTGC...CGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCCACTGCCATCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp GGTGTGGAAGGATGGCCGGGTTTCTGCAGCAGCAGGAGGAAAGGGTGGGAGCACCTTTCACGAGCCAGGTaGCCGTGGCAGCTGAAACAG +
Preference number: 4 (lower is better)
Translates to: GVEGWPGFCSSRRKGWEHLSRAR*PWQLKQ
Trigger: CTGTTTCAGCTGCCACGGCCACCTGGCTCGTGAAAG...GTGCTCCCACCCTTTCCTCCTGCTGCTGCAGAAACCCGGCCATCCTTCCACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp CCGTGTGGTCAACCTCAATGCCCTGCTCATGATGGCAGTGGCCGTGTTCCTCTGTTGTTCCTCCGAGCCTaGTGCACGGTCAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: PCGQPQCPAHDGSGRVPLLFLRA*CTVRAA
Trigger: GGCTGCCCTGACCGTGCACCAGGCTCGGAGGAACAA...CAGAGGAACACGGCCACTGCCATCATGAGCAGGGCATTGAGGTTGACCACACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp TGGGTAGGGCAGGCAGTGACGAGCTGGTGTGCAAGAGACTTTAGGGCCAGGCATTTGTTCCTCCGAGCCTaGTGCACGGTCAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: WVGQAVTSWCARDFRARHLFLRA*CTVRAA
Trigger: GGCTGCCCTGACCGTGCACCAGGCTCGGAGGAACAA...ATGCCTGGCCCTAAAGTCTCTTGCACACCAGCTCGTCACTGCCTGCCCTACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp TTCCCCTGTCCTGCTGTGGCCAAAGTGTCCTTGCTCCAGGTTCCTGCCCTGGGCTTCACCAGCGTCTCCTaGCTGCTGTCCTTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: FPCPAVAKVSLLQVPALGFTSVS*LLSLAD
Trigger: GTCAGCCAAGGACAGCAGCCAGGAGACGCTGGTGAA...GCCCAGGGCAGGAACCTGGAGCAAGGACACTTTGGCCACAGCAGGACAGGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp TCCCCTGTCCTGCTGTGGCCAAAGTGTCCTTGCTCCAGGTTCCTGCCCTGGGCTGCGGCTCCATGCGATTaGCTGCAGTTGGGTCGAGTA +
Preference number: 4 (lower is better)
Translates to: SPVLLWPKCPCSRFLPWAAAPCD*LQLGRV
Trigger: TACTCGACCCAACTGCAGCCAATCGCATGGAGCCGC...AGCCCAGGGCAGGAACCTGGAGCAAGGACACTTTGGCCACAGCAGGACAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp CCTCCCCAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGCCCTTAGGATGGTCTTaGGGCCTGCCTTCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: PPQLHRLVFSLRHSKEERPLGWS*GLPSGS
Trigger: TGAACCAGAAGGCAGGCCCCAAGACCATCCTAAGGG...CCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTGGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp AGGCCAACGGCTTTAAACACAAGCTCAGGGGCTTGGGGTTTATCCCGAGGGCACCAGCAGCCAGGCGGCTaGAGGACATCAGCGAGGACC +
Preference number: 4 (lower is better)
Translates to: RPTALNTSSGAWGLSRGHQQPGG*RTSART
Trigger: GGTCCTCGCTGATGTCCTCCAGCCGCCTGGCTGCTG...GTGCCCTCGGGATAAACCCCAAGCCCCTGAGCTTGTGTTTAAAGCCGTTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
CDS-3UTR CCA 90 bp GTCAACCTCAATGCCCTGCTCATGATGGCAGTGGCCGTGTTCCTCTGGGGCTTCTGGAATGAGCAGAGGTaGGGTGGGCAGTCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: VNLNALLMMAVAVFLWGFWNEQR*GGQSSA
Trigger: GGCGGAGGACTGCCCACCCCACCTCTGCTCATTCCA...GAAGCCCCAGAGGAACACGGCCACTGCCATCATGAGCAGGGCATTGAGGTTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000567994.5
ENST00000570164.5
CDS-3UTR TCA 90 bp GGTGTGGAAGGATGGCCGGGTTTCTGCAGCAGCAGGAGGAAAGGGTGGGAGCACGCTGCTGTCCTTGGCTaGCACGTCAGCCATGTTGTT +
Preference number: 4 (lower is better)
Translates to: GVEGWPGFCSSRRKGWEHAAVLG*HVSHVV
Trigger: AACAACATGGCTGACGTGTCAGCCAAGGACAGCAGC...GTGCTCCCACCCTTTCCTCCTGCTGCTGCAGAAACCCGGCCATCCTTCCACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR TCA 90 bp GGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAGGAGCATCAGGAGGCTaGCCAAGAGCCCCGCCAGGT +
Preference number: 4 (lower is better)
Translates to: GRVPLGLLCLRPTALDTIGASGG*PRAPPG
Trigger: ACCTGGCGGGGCTCTTGGTCAGCCTCCTGATGCTCC...TATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR TCA 90 bp CCGTGTGGTCAACCTCAATGCCCTGCTCATGATGGCAGTGGCCGTGTTCCTCTGGAAGCCAGGGCAACCTaGCACCAGAGGGAGCATCAG +
Preference number: 4 (lower is better)
Translates to: PCGQPQCPAHDGSGRVPLEARAT*HQREHQ
Trigger: CTGATGCTCCCTCTGGTGTCAGGTTGCCCTGGCTTC...CAGAGGAACACGGCCACTGCCATCATGAGCAGGGCATTGAGGTTGACCACACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
CDS-3UTR TCA 90 bp TTCCCCTGTCCTGCTGTGGCCAAAGTGTCCTTGCTCCAGGTTCCTGCCCTGGGCCTGTACCTGGTTTTGTaGCTGGTCCCAGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: FPCPAVAKVSLLQVPALGLYLVL*LVPAEE
Trigger: CTCCTCTGCTGGGACCAGTCACAAAACCAGGTACAG...GCCCAGGGCAGGAACCTGGAGCAAGGACACTTTGGCCACAGCAGGACAGGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR TCA 90 bp GGTGTGGAAGGATGGCCGGGTTTCTGCAGCAGCAGGAGGAAAGGGTGGGAGCACCTTCGTGTGTCTCCTTaGCGACGACCCAGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: GVEGWPGFCSSRRKGWEHLRVSP*RRPSSL
Trigger: AAGAGAGCTGGGTCGTCGTCAAGGAGACACACGAAG...GTGCTCCCACCCTTTCCTCCTGCTGCTGCAGAAACCCGGCCATCCTTCCACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR TCA 90 bp GGTGTGGAAGGATGGCCGGGTTTCTGCAGCAGCAGGAGGAAAGGGTGGGAGCACTCTGGTTTTGTGGAATaGGCAGAGGTGGGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: GVEGWPGFCSSRRKGWEHSGFVE*AEVGWA
Trigger: TGCCCACCCCACCTCTGCTCATTCCACAAAACCAGA...GTGCTCCCACCCTTTCCTCCTGCTGCTGCAGAAACCCGGCCATCCTTCCACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
CDS-3UTR GCA 90 bp ATGTTGTTCCTCCGAGCCTGGTGCACGGTCAGGGCAGCCCGAGTGGCCCCACCATCCACTGCTTGGCATTaGAGTCCAGTTTGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: MLFLRAWCTVRAARVAPPSTAWH*SPVCSL
Trigger: AAGGGAGCAAACTGGACTGCAATGCCAAGCAGTGGA...TGGTGGGGCCACTCGGGCTGCCCTGACCGTGCACCAGGCTCGGAGGAACAACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567578.1
CDS-3UTR GCA 90 bp GTCTCCGGCATAGCAAGGAGGAACGGGAGGACCTGGAGGACATCAGCGAGGACCTGCACTTGGCTAGGTTaGTGGTGGAGACGGTCATGG +
Preference number: 4 (lower is better)
Translates to: VSGIARRNGRTWRTSARTCTWLG*WWRRSW
Trigger: CCATGACCGTCTCCACCAGCAACCTAGCCAAGTGCA...GGTCCTCGCTGATGTCCTCCAGGTCCTCCCGTTCCTCCTTGCTATGCCGGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430477.6
CDS-3UTR GCA 90 bp GCCCGAGTGGCCCCACCAGCAACACTCACGATGCACTTGGCTAGGTTGCTGGTGTGCACTTGGCTAGGTTaGTGGTGGAGACGGTCATGG +
Preference number: 4 (lower is better)
Translates to: ARVAPPATLTMHLARLLVCTWLG*WWRRSW
Trigger: CCATGACCGTCTCCACCAGCAACCTAGCCAAGTGCA...CACCAGCAACCTAGCCAAGTGCATCGTGAGTGTTGCTGGTGGGGCCACTCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567578.1
CDS-3UTR GCA 90 bp CCGTGTGGTCAACCTCAATGCCCTGCTCATGATGGCAGTGGCCGTGTTCCTCTGCCAGCGTCTCCTGGCTaGTGTCCTTGGCTGACACGT +
Preference number: 4 (lower is better)
Translates to: PCGQPQCPAHDGSGRVPLPASPG*CPWLTR
Trigger: ACGTGTCAGCCAAGGACAGCAGCCAGGAGACGCTGG...CAGAGGAACACGGCCACTGCCATCATGAGCAGGGCATTGAGGTTGACCACACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR GCA 90 bp TCCCCTGTCCTGCTGTGGCCAAAGTGTCCTTGCTCCAGGTTCCTGCCCTGGGCTCTCCATGCGATTGGCTaGAGTTGGGTCGAGTACCTC +
Preference number: 4 (lower is better)
Translates to: SPVLLWPKCPCSRFLPWALHAIG*SWVEYL
Trigger: GAGGTACTCGACCCAACTGCAGCCAATCGCATGGAG...AGCCCAGGGCAGGAACCTGGAGCAAGGACACTTTGGCCACAGCAGGACAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR GCA 90 bp GGTGTGGAAGGATGGCCGGGTTTCTGCAGCAGCAGGAGGAAAGGGTGGGAGCACTGCCCCTCAACCAGCTaGTGCAGCTCAAAGACACTG +
Preference number: 4 (lower is better)
Translates to: GVEGWPGFCSSRRKGWEHCPSTS*CSSKTL
Trigger: CAGTGTCTTTGAGCTGCAGCAGCTGGTTGAGGGGCA...GTGCTCCCACCCTTTCCTCCTGCTGCTGCAGAAACCCGGCCATCCTTCCACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp CATGATGGCAGTGGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGAGGGGTCCATCTCCCTaGAGGGCCCCAAGCATCAGC +
Preference number: 4 (lower is better)
Translates to: HDGSGRVPLGLLCLRPTARGPSP*RAPSIS
Trigger: GCTGATGCTTGGGGCCCTGCAGGGAGATGGACCCCT...CGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCCACTGCCATCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR GCA 90 bp GTGAGCAGGACTGCCAGGCCAGTGTCACAAGCGCTACCATCTGGGTGTAGACAGCAGCTCCTCCAGCTCTaGTGGAAGGGGTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: VSRTARPVSQALPSGCRQQLLQL*WKGSIS
Trigger: GGAGATGGACCCCTTCCAGCAGAGCTGGAGGAGCTG...CTGTCTACACCCAGATGGTAGCGCTTGTGACACTGGCCTGGCAGTCCTGCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp TTCCCCTGTCCTGCTGTGGCCAAAGTGTCCTTGCTCCAGGTTCCTGCCCTGGGCGGCCTCCGTCTGGGCTaGTCACAAGACCTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: FPCPAVAKVSLLQVPALGGLRLG*SQDLLF
Trigger: GAAAAGAAGGTCTTGTGAGCAGCCCAGACGGAGGCC...GCCCAGGGCAGGAACCTGGAGCAAGGACACTTTGGCCACAGCAGGACAGGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR GCA 90 bp CTCCCCAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGCCTCTGGGGCTTCTATaGCTAAGACCAACTGCGTTG +
Preference number: 4 (lower is better)
Translates to: LPSSTAWSSVSGIARRNGPLGLL*LRPTAL
Trigger: CAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGG...CCCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp AGCAGGACTGCCAGGCCAGTGTCACAAGCGCTACCATCTGGGTGTAGACAGACCAATGGTAGGGCACCATaGTGGGAGGTGGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SRTARPVSQALPSGCRQTNGRAP*WEVGLE
Trigger: CTCCAGCCCCACCTCCCAGCATGGTGCCCTACCATT...GGTCTGTCTACACCCAGATGGTAGCGCTTGTGACACTGGCCTGGCAGTCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
CDS-3UTR GCA 90 bp GTGAGCAGGACTGCCAGGCCAGTGTCACAAGCGCTACCATCTGGGTGTAGACAGAATGGTAGGGCACCATaGTGGGAGGTGGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: VSRTARPVSQALPSGCRQNGRAP*WEVGLE
Trigger: CTCCAGCCCCACCTCCCAGCATGGTGCCCTACCATT...CTGTCTACACCCAGATGGTAGCGCTTGTGACACTGGCCTGGCAGTCCTGCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
CDS-3UTR GCA 90 bp CTGCTGTCCTTGGCTGACACGTCAGCCATGTTGTTCCTCCGAGCCTGGTGCACGCGATGCGGCCCAGCATaGCAGTTGAATCTGCACGGA +
Preference number: 4 (lower is better)
Translates to: LLSLADTSAMLFLRAWCTRCGPA*QLNLHG
Trigger: TCCGTGCAGATTCAACTGGCATGCTGGGCCGCATCG...CGTGCACCAGGCTCGGAGGAACAACATGGCTGACGTGTCAGCCAAGGACAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567578.1
CDS-3UTR CCA 90 bp TTCCCCTGTCCTGCTGTGGCCAAAGTGTCCTTGCTCCAGGTTCCTGCCCTGGGCTGGCAGCTGAAACAGTaGCTTTTGCGTTCCCCACCC +
Preference number: 4 (lower is better)
Translates to: FPCPAVAKVSLLQVPALGWQLKQ*LLRSPP
Trigger: GGGTGGGGAACGCAAAAGCCACTGTTTCAGCTGCCA...GCCCAGGGCAGGAACCTGGAGCAAGGACACTTTGGCCACAGCAGGACAGGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp ACTGTGAGCAGGACTGCCAGGCCAGTGTCACAAGCGCTACCATCTGGGTGTAGAGGACCGCGCGGTAGTTaGCGTAGATGTGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: TVSRTARPVSQALPSGCRGPRGS*RRCGGQ
Trigger: CTGCCCTCCACATCTACGCCAACTACCGCGCGGTCC...TCTACACCCAGATGGTAGCGCTTGTGACACTGGCCTGGCAGTCCTGCTCACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp AGCAGGACTGCCAGGCCAGTGTCACAAGCGCTACCATCTGGGTGTAGACAGACCTGGCGGCCCTTAGGATaGTCTTGGGGCCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: SRTARPVSQALPSGCRQTWRPLG*SWGLPS
Trigger: AGAAGGCAGGCCCCAAGACCATCCTAAGGGCCGCCA...GGTCTGTCTACACCCAGATGGTAGCGCTTGTGACACTGGCCTGGCAGTCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp GGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATACTTCCCATGAGGGCCTaGCCCACCCGCTGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: GRVPLGLLCLRPTALDTILPMRA*PTRCSC
Trigger: GCAACTGCAGCGGGTGGGCCAGGCCCTCATGGGAAG...TATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp TCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGAGGACCTGGAGGACATCAGCGCGGCCTTCCTCTGCCTaGGGCCCACTGCATCTGATT +
Preference number: 4 (lower is better)
Translates to: SSVSGIARRNGRTWRTSARPSSA*GPLHLI
Trigger: AATCAGATGCAGTGGGCCCCAGGCAGAGGAAGGCCG...CGCTGATGTCCTCCAGGTCCTCCCGTTCCTCCTTGCTATGCCGGAGACTGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430477.6
CDS-3UTR CCA 90 bp CATGATGGCAGTGGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGCGAGCTGGGCCCGTGTaGTCAACCTCAATGCCCTGC +
Preference number: 4 (lower is better)
Translates to: HDGSGRVPLGLLCLRPTARAGPV*STSMPC
Trigger: GCAGGGCATTGAGGTTGACCACACGGGCCCAGCTCG...CGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCCACTGCCATCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp CTCCCCAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGCCTGCTCTGGTTTTGTaGAATGAGCAGAGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: LPSSTAWSSVSGIARRNGPALVL*NEQRWG
Trigger: ACCCCACCTCTGCTCATTCCACAAAACCAGAGCAGG...CCCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
CDS-3UTR CCA 90 bp CCTCCCCAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGCCTGCTCTGGTTTTGTaGAATGAGCAGAGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: PPQLHRLVFSLRHSKEERPALVL*NEQRWG
Trigger: ACCCCACCTCTGCTCATTCCACAAAACCAGAGCAGG...CCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTGGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
CDS-3UTR CCA 90 bp TTCCCCTGTCCTGCTGTGGCCAAAGTGTCCTTGCTCCAGGTTCCTGCCCTGGGCAGGAACGGGAGGACCTaGATGCTGATGAGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: FPCPAVAKVSLLQVPALGRNGRT*MLMSSK
Trigger: CTTGCTGCTCATCAGCATCCAGGTCCTCCCGTTCCT...GCCCAGGGCAGGAACCTGGAGCAAGGACACTTTGGCCACAGCAGGACAGGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
CDS-3UTR CCA 90 bp CTCCCCAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGCAAGAGATCTGGGTGTaGAAGGATGGCCGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: LPSSTAWSSVSGIARRNGQEIWV*KDGRVS
Trigger: AGAAACCCGGCCATCCTTCCACACCCAGATCTCTTG...CCCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp GTCAACCTCAATGCCCTGCTCATGATGGCAGTGGCCGTGTTCCTCTGGGGCTTCAGGAACGGGAGGACCTaGAGGACATCAGCGAGGACC +
Preference number: 4 (lower is better)
Translates to: VNLNALLMMAVAVFLWGFRNGRT*RTSART
Trigger: GGTCCTCGCTGATGTCCTCCAGGTCCTCCCGTTCCT...GAAGCCCCAGAGGAACACGGCCACTGCCATCATGAGCAGGGCATTGAGGTTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430477.6
CDS-3UTR TCA 90 bp CATGATGGCAGTGGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGGCAAGTAGTCCGGGCTaGCGCTATCAGGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: HDGSGRVPLGLLCLRPTAASSPG*RYQGSP
Trigger: AGGGCTTCCCTGATAGCGTCAGCCCGGACTACTTGC...CGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCCACTGCCATCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR TCA 90 bp GTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCCACCGTTCAAGGTCTCCATaGCCAGGGCTCGGACCGCGC +
Preference number: 4 (lower is better)
Translates to: VPLGLLCLRPTALDTISHRSRSP*PGLGPR
Trigger: GCGCGGTCCGAGCCCTGGTCATGGAGACCTTGAACG...GTGGCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR TCA 90 bp GTCAACCTCAATGCCCTGCTCATGATGGCAGTGGCCGTGTTCCTCTGGGGCTTCTCAATGCCCTGCTCATaGTGGCAGTGGCCGTGTTCC +
Preference number: 4 (lower is better)
Translates to: VNLNALLMMAVAVFLWGFSMPCS*WQWPCS
Trigger: GGAACACGGCCACTGCCATCATGAGCAGGGCATTGA...GAAGCCCCAGAGGAACACGGCCACTGCCATCATGAGCAGGGCATTGAGGTTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR GCA 90 bp CGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCTCCCCGGAGCCGAACTaGTCGGAACACAGCGGGGTC +
Preference number: 4 (lower is better)
Translates to: RVPLGLLCLRPTALDTISSPEPN*SEHSGV
Trigger: GACCCCGCTGTGTTCCGAGCAGTTCGGCTCCGGGGA...GCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR GCA 90 bp CAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGAGGACCGATGCGGCCCAGCATaGCAGTTGAATCTTTCACGA +
Preference number: 4 (lower is better)
Translates to: QLHRLVFSLRHSKEEREDRCGPA*QLNLSR
Trigger: TCGTGAAAGATTCAACTGGCATGCTGGGCCGCATCG...GTCCTCCCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp TCCCCTGTCCTGCTGTGGCCAAAGTGTCCTTGCTCCAGGTTCCTGCCCTGGGCTCGATGCGGCCCAGCATaGCAGTTGAATCTTTCACGA +
Preference number: 4 (lower is better)
Translates to: SPVLLWPKCPCSRFLPWARCGPA*QLNLSR
Trigger: TCGTGAAAGATTCAACTGGCATGCTGGGCCGCATCG...AGCCCAGGGCAGGAACCTGGAGCAAGGACACTTTGGCCACAGCAGGACAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR GCA 90 bp CAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGAGGACGATGGTCTTGGGGCCTaGCTTCTGGTTCAGAACTAC +
Preference number: 4 (lower is better)
Translates to: QLHRLVFSLRHSKEEREDDGLGA*LLVQNY
Trigger: GTAGTTCTGAACCAGAAGGCAGGCCCCAAGACCATC...GTCCTCCCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp ACGGCTTTAAACACAAGCTCAGGGGCTTGGGGTTTATCCCGAGGGCACAGGGCACAGCTCCTCCAGCTCTaGTGGAAGGGGTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: TALNTSSGAWGLSRGHRAQLLQL*WKGSIS
Trigger: GGAGATGGACCCCTTCCAGCAGAGCTGGAGGAGCTG...TGCCCTGTGCCCTCGGGATAAACCCCAAGCCCCTGAGCTTGTGTTTAAAGCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp GTGAGCAGGACTGCCAGGCCAGTGTCACAAGCGCTACCATCTGGGTGTAGACAGCTCTTTCTTAGGACCTaGCCGCACCCGGTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: VSRTARPVSQALPSGCRQLFLRT*PHPVPQ
Trigger: CTGAGGAACCGGGTGCGGGCAGGTCCTAAGAAAGAG...CTGTCTACACCCAGATGGTAGCGCTTGTGACACTGGCCTGGCAGTCCTGCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp CAGGGCAGCCATGTAGGGTGGAGTTGGCATGAGTTAAGCCTGGGCTGGGTGTGTCTCTTTCTTAGGACCTaGCCGCACCCGGTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: QGSHVGWSWHELSLGWVCLFLRT*PHPVPQ
Trigger: CTGAGGAACCGGGTGCGGGCAGGTCCTAAGAAAGAG...ACACACCCAGCCCAGGCTTAACTCATGCCAACTCCACCCTACATGGCTGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp TGGGTAGGGCAGGCAGTGACGAGCTGGTGTGCAAGAGACTTTAGGGCCAGGCATTGGCCAAAGTGTCCTTaGTCCAGGTTCCTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: WVGQAVTSWCARDFRARHWPKCP*SRFLPW
Trigger: CCAGGGCAGGAACCTGGAGCAAGGACACTTTGGCCA...ATGCCTGGCCCTAAAGTCTCTTGCACACCAGCTCGTCACTGCCTGCCCTACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp TCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGAGGACCTGGAGGACATCAGCGGCCTGGCCCACCCGCTaGAGTTGCCCTAAGGAAAAA +
Preference number: 4 (lower is better)
Translates to: SSVSGIARRNGRTWRTSAAWPTR*SCPKEK
Trigger: TTTTTCCTTAGGGCAACTGCAGCGGGTGGGCCAGGC...CGCTGATGTCCTCCAGGTCCTCCCGTTCCTCCTTGCTATGCCGGAGACTGAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430477.6
CDS-3UTR GCA 90 bp CCTCCCCAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGTGTGGTCAACCTCAATaGCCTGCTCATGATGGCAGT +
Preference number: 4 (lower is better)
Translates to: PPQLHRLVFSLRHSKEERCGQPQ*PAHDGS
Trigger: ACTGCCATCATGAGCAGGGCATTGAGGTTGACCACA...CCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTGGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp TGGGTAGGGCAGGCAGTGACGAGCTGGTGTGCAAGAGACTTTAGGGCCAGGCATCACTGTGAGCAGGACTaGCAGGCCAGTGTCACAAGC +
Preference number: 4 (lower is better)
Translates to: WVGQAVTSWCARDFRARHHCEQD*QASVTS
Trigger: GCTTGTGACACTGGCCTGGCAGTCCTGCTCACAGTG...ATGCCTGGCCCTAAAGTCTCTTGCACACCAGCTCGTCACTGCCTGCCCTACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp CGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCGCAAGACTGCCTGGGTaGCTAGGGAGCCGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: RVPLGLLCLRPTALDTISARLPG*LGSRRG
Trigger: GCCTCTCCGGCTCCCTAGCCACCCAGGCAGTCTTGC...GCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp CCGTGTGGTCAACCTCAATGCCCTGCTCATGATGGCAGTGGCCGTGTTCCTCTGCTTTCACGAGCCAGGTaGCCGTGGCAGCTGAAACAG +
Preference number: 4 (lower is better)
Translates to: PCGQPQCPAHDGSGRVPLLSRAR*PWQLKQ
Trigger: CTGTTTCAGCTGCCACGGCCACCTGGCTCGTGAAAG...CAGAGGAACACGGCCACTGCCATCATGAGCAGGGCATTGAGGTTGACCACACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp GTGAGCAGGACTGCCAGGCCAGTGTCACAAGCGCTACCATCTGGGTGTAGACAGCCTGGCTGCTGTCCTTaGCTGACACGTCAGCCATGT +
Preference number: 4 (lower is better)
Translates to: VSRTARPVSQALPSGCRQPGCCP*LTRQPC
Trigger: ACATGGCTGACGTGTCAGCCAAGGACAGCAGCCAGG...CTGTCTACACCCAGATGGTAGCGCTTGTGACACTGGCCTGGCAGTCCTGCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp GTCAACCTCAATGCCCTGCTCATGATGGCAGTGGCCGTGTTCCTCTGGGGCTTCGCGATTGGCTGCAGTTaGGTCGAGTACCTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: VNLNALLMMAVAVFLWGFAIGCS*VEYLSP
Trigger: AGGGGAGAGGTACTCGACCCAACTGCAGCCAATCGC...GAAGCCCCAGAGGAACACGGCCACTGCCATCATGAGCAGGGCATTGAGGTTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp GTGAGCAGGACTGCCAGGCCAGTGTCACAAGCGCTACCATCTGGGTGTAGACAGGCGATTGGCTGCAGTTaGGTCGAGTACCTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: VSRTARPVSQALPSGCRQAIGCS*VEYLSP
Trigger: AGGGGAGAGGTACTCGACCCAACTGCAGCCAATCGC...CTGTCTACACCCAGATGGTAGCGCTTGTGACACTGGCCTGGCAGTCCTGCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp CAGGGCAGCCATGTAGGGTGGAGTTGGCATGAGTTAAGCCTGGGCTGGGTGTGTGCGGCTCCATGCGATTaGCTGCAGTTGGGTCGAGTA +
Preference number: 4 (lower is better)
Translates to: QGSHVGWSWHELSLGWVCAAPCD*LQLGRV
Trigger: TACTCGACCCAACTGCAGCCAATCGCATGGAGCCGC...ACACACCCAGCCCAGGCTTAACTCATGCCAACTCCACCCTACATGGCTGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp TCCCCTGTCCTGCTGTGGCCAAAGTGTCCTTGCTCCAGGTTCCTGCCCTGGGCTTTGGGGCCTGCCTTCTaGTTCAGAACTACCTGTACC +
Preference number: 4 (lower is better)
Translates to: SPVLLWPKCPCSRFLPWALGPAF*FRTTCT
Trigger: GGTACAGGTAGTTCTGAACCAGAAGGCAGGCCCCAA...AGCCCAGGGCAGGAACCTGGAGCAAGGACACTTTGGCCACAGCAGGACAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp GGCAGCCATGTAGGGTGGAGTTGGCATGAGTTAAGCCTGGGCTGGGTGTGTAGAGCTTGGGCCTCCGTCTaGGCTGCTCACAAGACCTTC +
Preference number: 4 (lower is better)
Translates to: GSHVGWSWHELSLGWVCRAWASV*AAHKTF
Trigger: GAAGGTCTTGTGAGCAGCCCAGACGGAGGCCCAAGC...TCTACACACCCAGCCCAGGCTTAACTCATGCCAACTCCACCCTACATGGCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp GTCAACCTCAATGCCCTGCTCATGATGGCAGTGGCCGTGTTCCTCTGGGGCTTCTCCCCTGTCCTGCTGTaGCCAAAGTGTCCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: VNLNALLMMAVAVFLWGFSPVLL*PKCPCS
Trigger: GGAGCAAGGACACTTTGGCCACAGCAGGACAGGGGA...GAAGCCCCAGAGGAACACGGCCACTGCCATCATGAGCAGGGCATTGAGGTTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp TGGGTAGGGCAGGCAGTGACGAGCTGGTGTGCAAGAGACTTTAGGGCCAGGCATTCCCCTGTCCTGCTGTaGCCAAAGTGTCCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: WVGQAVTSWCARDFRARHSPVLL*PKCPCS
Trigger: GGAGCAAGGACACTTTGGCCACAGCAGGACAGGGGA...ATGCCTGGCCCTAAAGTCTCTTGCACACCAGCTCGTCACTGCCTGCCCTACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp CGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCCTTCCCATGAGGGCCTaGCCCACCCGCTGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: RVPLGLLCLRPTALDTISLPMRA*PTRCSC
Trigger: GCAACTGCAGCGGGTGGGCCAGGCCCTCATGGGAAG...GCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp GTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCCACGGGGTGAGAAGGTCCTaGCTCCCCTTCTCCCGGCCT +
Preference number: 4 (lower is better)
Translates to: VPLGLLCLRPTALDTISHGVRRS*LPFSRP
Trigger: AGGCCGGGAGAAGGGGAGCCAGGACCTTCTCACCCC...GTGGCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp GTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCCACAGCGAGGACCCGAGCTaGGCCCGTGTGGTCAACCTC +
Preference number: 4 (lower is better)
Translates to: VPLGLLCLRPTALDTISHSEDPS*ARVVNL
Trigger: GAGGTTGACCACACGGGCCCAGCTCGGGTCCTCGCT...GTGGCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp CGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCCAGCAGCCAGGCGGCTaGAGGACATCAGCGAGGACC +
Preference number: 4 (lower is better)
Translates to: RVPLGLLCLRPTALDTISQQPGG*RTSART
Trigger: GGTCCTCGCTGATGTCCTCCAGCCGCCTGGCTGCTG...GCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp GGTGTGGAAGGATGGCCGGGTTTCTGCAGCAGCAGGAGGAAAGGGTGGGAGCACGGCAGCCATGTAGGGTaGAGTTGGCATGAGTTAAGC +
Preference number: 4 (lower is better)
Translates to: GVEGWPGFCSSRRKGWEHGSHVG*SWHELS
Trigger: GCTTAACTCATGCCAACTCCACCCTACATGGCTGCC...GTGCTCCCACCCTTTCCTCCTGCTGCTGCAGAAACCCGGCCATCCTTCCACACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp GTCAACCTCAATGCCCTGCTCATGATGGCAGTGGCCGTGTTCCTCTGGGGCTTCACAAGCTCAGGGGCTTaGGGTTTATCCCGAGGGCAC +
Preference number: 4 (lower is better)
Translates to: VNLNALLMMAVAVFLWGFTSSGA*GLSRGH
Trigger: GTGCCCTCGGGATAAACCCCAAGCCCCTGAGCTTGT...GAAGCCCCAGAGGAACACGGCCACTGCCATCATGAGCAGGGCATTGAGGTTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp AGCAGGACTGCCAGGCCAGTGTCACAAGCGCTACCATCTGGGTGTAGACAGACCACAAGCTCAGGGGCTTaGGGTTTATCCCGAGGGCAC +
Preference number: 4 (lower is better)
Translates to: SRTARPVSQALPSGCRQTTSSGA*GLSRGH
Trigger: GTGCCCTCGGGATAAACCCCAAGCCCCTGAGCTTGT...GGTCTGTCTACACCCAGATGGTAGCGCTTGTGACACTGGCCTGGCAGTCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp GGCAGCCATGTAGGGTGGAGTTGGCATGAGTTAAGCCTGGGCTGGGTGTGTAGACTGGGTGTGGAAGGATaGCCGGGTTTCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GSHVGWSWHELSLGWVCRLGVEG*PGFCSS
Trigger: GCTGCTGCAGAAACCCGGCCATCCTTCCACACCCAG...TCTACACACCCAGCCCAGGCTTAACTCATGCCAACTCCACCCTACATGGCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp CTCCCCAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGCCTTGGCATGGCCTTTaGGACTCAAAACACAGGATC +
Preference number: 4 (lower is better)
Translates to: LPSSTAWSSVSGIARRNGPWHGL*DSKHRI
Trigger: GATCCTGTGTTTTGAGTCCCAAAGGCCATGCCAAGG...CCCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp GTCTCCGGCATAGCAAGGAGGAACGGGAGGACCTGGAGGACATCAGCGAGGACCCCCAAAGCCAATCCTTaGCATGGCCTTTGGGACTCA +
Preference number: 4 (lower is better)
Translates to: VSGIARRNGRTWRTSARTPKANP*HGLWDS
Trigger: TGAGTCCCAAAGGCCATGCCAAGGATTGGCTTTGGG...GGTCCTCGCTGATGTCCTCCAGGTCCTCCCGTTCCTCCTTGCTATGCCGGAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430477.6
CDS-3UTR TCA 90 bp GGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAGCAAGTAGTCCGGGCTaGCGCTATCAGGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: GRVPLGLLCLRPTALDTIASSPG*RYQGSP
Trigger: AGGGCTTCCCTGATAGCGTCAGCCCGGACTACTTGC...TATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR TCA 90 bp ACGGCTTTAAACACAAGCTCAGGGGCTTGGGGTTTATCCCGAGGGCACAGGGCAGGTGGCCGTGGCAGCTaGAACAGTGGCTTTTGCGTT +
Preference number: 4 (lower is better)
Translates to: TALNTSSGAWGLSRGHRAGGRGS*NSGFCV
Trigger: AACGCAAAAGCCACTGTTTCAGCTGCCACGGCCACC...TGCCCTGTGCCCTCGGGATAAACCCCAAGCCCCTGAGCTTGTGTTTAAAGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR TCA 90 bp TCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGAGGACCTGGAGGACATCAGCGGCCCAGCATGCCAGTTaGATCTTTCACGAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: SSVSGIARRNGRTWRTSAAQHAS*IFHEPG
Trigger: ACCTGGCTCGTGAAAGATTCAACTGGCATGCTGGGC...CGCTGATGTCCTCCAGGTCCTCCCGTTCCTCCTTGCTATGCCGGAGACTGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430477.6
CDS-3UTR TCA 90 bp TTCCCCTGTCCTGCTGTGGCCAAAGTGTCCTTGCTCCAGGTTCCTGCCCTGGGCACATGGCTACGTCATTaGGGATGTCCGCAAAAAGCC +
Preference number: 4 (lower is better)
Translates to: FPCPAVAKVSLLQVPALGTWLRH*GCPQKA
Trigger: GGCTTTTTGCGGACATCCTCAATGACGTAGCCATGT...GCCCAGGGCAGGAACCTGGAGCAAGGACACTTTGGCCACAGCAGGACAGGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR TCA 90 bp CCGTGTGGTCAACCTCAATGCCCTGCTCATGATGGCAGTGGCCGTGTTCCTCTGCTGTACCTGGTTTTGTaGCTGGTCCCAGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: PCGQPQCPAHDGSGRVPLLYLVL*LVPAEE
Trigger: CTCCTCTGCTGGGACCAGTCACAAAACCAGGTACAG...CAGAGGAACACGGCCACTGCCATCATGAGCAGGGCATTGAGGTTGACCACACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR TCA 90 bp CCGTGTGGTCAACCTCAATGCCCTGCTCATGATGGCAGTGGCCGTGTTCCTCTGCTTCGTGTGTCTCCTTaGCGACGACCCAGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: PCGQPQCPAHDGSGRVPLLRVSP*RRPSSL
Trigger: AAGAGAGCTGGGTCGTCGTCAAGGAGACACACGAAG...CAGAGGAACACGGCCACTGCCATCATGAGCAGGGCATTGAGGTTGACCACACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR TCA 90 bp ACTGTGAGCAGGACTGCCAGGCCAGTGTCACAAGCGCTACCATCTGGGTGTAGAGGGGCCCACTGCATCTaGTTGGCAGTCACTTCCCAT +
Preference number: 4 (lower is better)
Translates to: TVSRTARPVSQALPSGCRGAHCI*LAVTSH
Trigger: ATGGGAAGTGACTGCCAATCAGATGCAGTGGGCCCC...TCTACACCCAGATGGTAGCGCTTGTGACACTGGCCTGGCAGTCCTGCTCACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR TCA 90 bp GGCAGCCATGTAGGGTGGAGTTGGCATGAGTTAAGCCTGGGCTGGGTGTGTAGAAGGGTGGAGTTGGCATaGGTTAAGCCTGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: GSHVGWSWHELSLGWVCRRVELA*VKPGLG
Trigger: ACCCAGCCCAGGCTTAACTCATGCCAACTCCACCCT...TCTACACACCCAGCCCAGGCTTAACTCATGCCAACTCCACCCTACATGGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp TCCCCTGTCCTGCTGTGGCCAAAGTGTCCTTGCTCCAGGTTCCTGCCCTGGGCTCATTGCAGTCCAGTTTaGTCCCTTTCCACCAGGCAA +
Preference number: 4 (lower is better)
Translates to: SPVLLWPKCPCSRFLPWAHCSPV*SLSTRQ
Trigger: TTGCCTGGTGGAAAGGGAGCAAACTGGACTGCAATG...AGCCCAGGGCAGGAACCTGGAGCAAGGACACTTTGGCCACAGCAGGACAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR GCA 90 bp TCCCCTGTCCTGCTGTGGCCAAAGTGTCCTTGCTCCAGGTTCCTGCCCTGGGCTTCCACTGCTTGGCATTaGAGTCCAGTTTGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: SPVLLWPKCPCSRFLPWASTAWH*SPVCSL
Trigger: AAGGGAGCAAACTGGACTGCAATGCCAAGCAGTGGA...AGCCCAGGGCAGGAACCTGGAGCAAGGACACTTTGGCCACAGCAGGACAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR GCA 90 bp CAGGGCAGCCATGTAGGGTGGAGTTGGCATGAGTTAAGCCTGGGCTGGGTGTGTTGCACTTGGCTAGGTTaGTGGTGGAGACGGTCATGG +
Preference number: 4 (lower is better)
Translates to: QGSHVGWSWHELSLGWVCCTWLG*WWRRSW
Trigger: CCATGACCGTCTCCACCAGCAACCTAGCCAAGTGCA...ACACACCCAGCCCAGGCTTAACTCATGCCAACTCCACCCTACATGGCTGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp GGCGTAGATGTGGAGGGCAGTGAGGAAGAAGAAACATCCAAGGCTGAAGCCAGGCCAGCGTCTCCTGGCTaGTGTCCTTGGCTGACACGT +
Preference number: 4 (lower is better)
Translates to: GVDVEGSEEEETSKAEARPASPG*CPWLTR
Trigger: ACGTGTCAGCCAAGGACAGCAGCCAGGAGACGCTGG...CCTGGCTTCAGCCTTGGATGTTTCTTCTTCCTCACTGCCCTCCACATCTACGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565128.5
CDS-3UTR GCA 90 bp ACGGCTTTAAACACAAGCTCAGGGGCTTGGGGTTTATCCCGAGGGCACAGGGCATCCACAGCGGCTCCATaGGATTGGCTGCAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: TALNTSSGAWGLSRGHRASTAAP*DWLQLG
Trigger: ACCCAACTGCAGCCAATCGCATGGAGCCGCTGTGGA...TGCCCTGTGCCCTCGGGATAAACCCCAAGCCCCTGAGCTTGTGTTTAAAGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp ACTGTGAGCAGGACTGCCAGGCCAGTGTCACAAGCGCTACCATCTGGGTGTAGATCCACAGCGGCTCCATaGGATTGGCTGCAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: TVSRTARPVSQALPSGCRSTAAP*DWLQLG
Trigger: ACCCAACTGCAGCCAATCGCATGGAGCCGCTGTGGA...TCTACACCCAGATGGTAGCGCTTGTGACACTGGCCTGGCAGTCCTGCTCACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp GTCAACCTCAATGCCCTGCTCATGATGGCAGTGGCCGTGTTCCTCTGGGGCTTCCCCTCAACCAGCTGCTaGAGCTCAAAGACACTGGAG +
Preference number: 4 (lower is better)
Translates to: VNLNALLMMAVAVFLWGFPSTSC*SSKTLE
Trigger: CTCCAGTGTCTTTGAGCTGCAGCAGCTGGTTGAGGG...GAAGCCCCAGAGGAACACGGCCACTGCCATCATGAGCAGGGCATTGAGGTTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR GCA 90 bp GTGAGCAGGACTGCCAGGCCAGTGTCACAAGCGCTACCATCTGGGTGTAGACAGTGCCCCTCAACCAGCTaGTGCAGCTCAAAGACACTG +
Preference number: 4 (lower is better)
Translates to: VSRTARPVSQALPSGCRQCPSTS*CSSKTL
Trigger: CAGTGTCTTTGAGCTGCAGCAGCTGGTTGAGGGGCA...CTGTCTACACCCAGATGGTAGCGCTTGTGACACTGGCCTGGCAGTCCTGCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp AGGCCAACGGCTTTAAACACAAGCTCAGGGGCTTGGGGTTTATCCCGAGGGCACCTCTTTCTTAGGACCTaGCCGCACCCGGTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: RPTALNTSSGAWGLSRGHLFLRT*PHPVPQ
Trigger: CTGAGGAACCGGGTGCGGGCAGGTCCTAAGAAAGAG...GTGCCCTCGGGATAAACCCCAAGCCCCTGAGCTTGTGTTTAAAGCCGTTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp TTCCCCTGTCCTGCTGTGGCCAAAGTGTCCTTGCTCCAGGTTCCTGCCCTGGGCTGTGGTCAACCTCAATaGCCTGCTCATGATGGCAGT +
Preference number: 4 (lower is better)
Translates to: FPCPAVAKVSLLQVPALGCGQPQ*PAHDGS
Trigger: ACTGCCATCATGAGCAGGGCATTGAGGTTGACCACA...GCCCAGGGCAGGAACCTGGAGCAAGGACACTTTGGCCACAGCAGGACAGGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp CCGTGTGGTCAACCTCAATGCCCTGCTCATGATGGCAGTGGCCGTGTTCCTCTGTGGCAGCTGAAACAGTaGCTTTTGCGTTCCCCACCC +
Preference number: 4 (lower is better)
Translates to: PCGQPQCPAHDGSGRVPLWQLKQ*LLRSPP
Trigger: GGGTGGGGAACGCAAAAGCCACTGTTTCAGCTGCCA...CAGAGGAACACGGCCACTGCCATCATGAGCAGGGCATTGAGGTTGACCACACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp GTCAACCTCAATGCCCTGCTCATGATGGCAGTGGCCGTGTTCCTCTGGGGCTTCTGGCAGCTGAAACAGTaGCTTTTGCGTTCCCCACCC +
Preference number: 4 (lower is better)
Translates to: VNLNALLMMAVAVFLWGFWQLKQ*LLRSPP
Trigger: GGGTGGGGAACGCAAAAGCCACTGTTTCAGCTGCCA...GAAGCCCCAGAGGAACACGGCCACTGCCATCATGAGCAGGGCATTGAGGTTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp AGCCAATCCTTGGCATGGCCTTTGGGACTCAAAACACAGGATCTGACTGGTGGGTTGTTCCTCCGAGCCTaGTGCACGGTCAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SQSLAWPLGLKTQDLTGGLFLRA*CTVRAA
Trigger: GGCTGCCCTGACCGTGCACCAGGCTCGGAGGAACAA...CCCACCAGTCAGATCCTGTGTTTTGAGTCCCAAAGGCCATGCCAAGGATTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp CATGATGGCAGTGGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGGCGATTGGCTGCAGTTaGGTCGAGTACCTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: HDGSGRVPLGLLCLRPTAAIGCS*VEYLSP
Trigger: AGGGGAGAGGTACTCGACCCAACTGCAGCCAATCGC...CGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCCACTGCCATCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp ACGGCTTTAAACACAAGCTCAGGGGCTTGGGGTTTATCCCGAGGGCACAGGGCAGCGGCTCCATGCGATTaGCTGCAGTTGGGTCGAGTA +
Preference number: 4 (lower is better)
Translates to: TALNTSSGAWGLSRGHRAAAPCD*LQLGRV
Trigger: TACTCGACCCAACTGCAGCCAATCGCATGGAGCCGC...TGCCCTGTGCCCTCGGGATAAACCCCAAGCCCCTGAGCTTGTGTTTAAAGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp GGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATATGGCGGCCCTTAGGATaGTCTTGGGGCCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: GRVPLGLLCLRPTALDTIWRPLG*SWGLPS
Trigger: AGAAGGCAGGCCCCAAGACCATCCTAAGGGCCGCCA...TATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp GGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATACTCCTCCAGCTCTGCTaGAAGGGGTCCATCTCCCTG +
Preference number: 4 (lower is better)
Translates to: GRVPLGLLCLRPTALDTILLQLC*KGSISL
Trigger: CAGGGAGATGGACCCCTTCCAGCAGAGCTGGAGGAG...TATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp AGGCCAACGGCTTTAAACACAAGCTCAGGGGCTTGGGGTTTATCCCGAGGGCACTCCCCTGTCCTGCTGTaGCCAAAGTGTCCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: RPTALNTSSGAWGLSRGHSPVLL*PKCPCS
Trigger: GGAGCAAGGACACTTTGGCCACAGCAGGACAGGGGA...GTGCCCTCGGGATAAACCCCAAGCCCCTGAGCTTGTGTTTAAAGCCGTTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp GTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCCACCGAGCTGGGCCCGTGTaGTCAACCTCAATGCCCTGC +
Preference number: 4 (lower is better)
Translates to: VPLGLLCLRPTALDTISHRAGPV*STSMPC
Trigger: GCAGGGCATTGAGGTTGACCACACGGGCCCAGCTCG...GTGGCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp GTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCCACTGGAATGAGCAGAGGTaGGGTGGGCAGTCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: VPLGLLCLRPTALDTISHWNEQR*GGQSSA
Trigger: GGCGGAGGACTGCCCACCCCACCTCTGCTCATTCCA...GTGGCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp ACGGCTTTAAACACAAGCTCAGGGGCTTGGGGTTTATCCCGAGGGCACAGGGCACTGATGGTGGCAGGGTaGGGTGAGGACAGGACAAGA +
Preference number: 4 (lower is better)
Translates to: TALNTSSGAWGLSRGHRALMVAG*GEDRTR
Trigger: TCTTGTCCTGTCCTCACCCCACCCTGCCACCATCAG...TGCCCTGTGCCCTCGGGATAAACCCCAAGCCCCTGAGCTTGTGTTTAAAGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR TCA 90 bp GGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAGGTGGCCGTGGCAGCTaGAACAGTGGCTTTTGCGTT +
Preference number: 4 (lower is better)
Translates to: GRVPLGLLCLRPTALDTIGGRGS*NSGFCV
Trigger: AACGCAAAAGCCACTGTTTCAGCTGCCACGGCCACC...TATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR TCA 90 bp GTCTCCTGGCTGCTGTCCTTGGCTGACACGTCAGCCATGTTGTTCCTCCGAGCCACATGGCTACGTCATTaGGGATGTCCGCAAAAAGCC +
Preference number: 4 (lower is better)
Translates to: VSWLLSLADTSAMLFLRATWLRH*GCPQKA
Trigger: GGCTTTTTGCGGACATCCTCAATGACGTAGCCATGT...GGCTCGGAGGAACAACATGGCTGACGTGTCAGCCAAGGACAGCAGCCAGGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567578.1
CDS-3UTR TCA 90 bp AGCCAATCCTTGGCATGGCCTTTGGGACTCAAAACACAGGATCTGACTGGTGGGGAAGCCAGGGCAACCTaGCACCAGAGGGAGCATCAG +
Preference number: 4 (lower is better)
Translates to: SQSLAWPLGLKTQDLTGGEARAT*HQREHQ
Trigger: CTGATGCTCCCTCTGGTGTCAGGTTGCCCTGGCTTC...CCCACCAGTCAGATCCTGTGTTTTGAGTCCCAAAGGCCATGCCAAGGATTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000430477.6
CDS-3UTR TCA 90 bp ACAGGATCTGACTGGTGGGCACAATACCATCTTGAACGCCCACAAAAAGGTTTGCACAGGAAGTGGGGGTaGGGAGCCTGCGGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: TGSDWWAQYHLERPQKGLHRKWG*GACGAP
Trigger: GGGAGCACCGCAGGCTCCTCACCCCCACTTCCTGTG...CAAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGCCCACCAGTCAGATCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR TCA 90 bp TTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCATGGCCTTTGGGACTCAAACACAGGAAGTGGGGGTaGGGAGCCTGCGGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: LVIKASQSQSLAWPLGLKHRKWG*GACGAP
Trigger: GGGAGCACCGCAGGCTCCTCACCCCCACTTCCTGTG...TTTGAGTCCCAAAGGCCATGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR TCA 90 bp ACGGCTTTAAACACAAGCTCAGGGGCTTGGGGTTTATCCCGAGGGCACAGGGCATCTGGTTTTGTGGAATaGGCAGAGGTGGGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: TALNTSSGAWGLSRGHRASGFVE*AEVGWA
Trigger: TGCCCACCCCACCTCTGCTCATTCCACAAAACCAGA...TGCCCTGTGCCCTCGGGATAAACCCCAAGCCCCTGAGCTTGTGTTTAAAGCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
CDS-3UTR TCA 90 bp GGTGTGGAAGGATGGCCGGGTTTCTGCAGCAGCAGGAGGAAAGGGTGGGAGCACTCAAAACACAGGATCTaGCTGGTGGGCACAATACCA +
Preference number: 4 (lower is better)
Translates to: GVEGWPGFCSSRRKGWEHSKHRI*LVGTIP
Trigger: TGGTATTGTGCCCACCAGTCAGATCCTGTGTTTTGA...GTGCTCCCACCCTTTCCTCCTGCTGCTGCAGAAACCCGGCCATCCTTCCACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR TCA 90 bp CCTCCCCAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGTTAAATACATTTATTTaGACCGGCCTGGGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: PPQLHRLVFSLRHSKEERLNTFI*TGLGEA
Trigger: AGCCTCCCCCAGGCCGGTTCAAATAAATGTATTTAA...CCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTGGGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
CDS-3UTR GCA 90 bp GTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCCACCCAGCGTCTCCTGGCTaGTGTCCTTGGCTGACACGT +
Preference number: 4 (lower is better)
Translates to: VPLGLLCLRPTALDTISHPASPG*CPWLTR
Trigger: ACGTGTCAGCCAAGGACAGCAGCCAGGAGACGCTGG...GTGGCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR GCA 90 bp ACACTCACGATGCACTTGGCTAGGTTGCTGGTGGAGACGGTCATGGTGAAACAGCCAGCGTCTCCTGGCTaGTGTCCTTGGCTGACACGT +
Preference number: 4 (lower is better)
Translates to: TLTMHLARLLVETVMVKQPASPG*CPWLTR
Trigger: ACGTGTCAGCCAAGGACAGCAGCCAGGAGACGCTGG...CTGTTTCACCATGACCGTCTCCACCAGCAACCTAGCCAAGTGCATCGTGAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567578.1
CDS-3UTR GCA 90 bp ACTGTGAGCAGGACTGCCAGGCCAGTGTCACAAGCGCTACCATCTGGGTGTAGACTCCATGCGATTGGCTaGAGTTGGGTCGAGTACCTC +
Preference number: 4 (lower is better)
Translates to: TVSRTARPVSQALPSGCRLHAIG*SWVEYL
Trigger: GAGGTACTCGACCCAACTGCAGCCAATCGCATGGAG...TCTACACCCAGATGGTAGCGCTTGTGACACTGGCCTGGCAGTCCTGCTCACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp CATGATGGCAGTGGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGCCCTCAACCAGCTGCTaGAGCTCAAAGACACTGGAG +
Preference number: 4 (lower is better)
Translates to: HDGSGRVPLGLLCLRPTAPSTSC*SSKTLE
Trigger: CTCCAGTGTCTTTGAGCTGCAGCAGCTGGTTGAGGG...CGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCCACTGCCATCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR GCA 90 bp GGCAGCCATGTAGGGTGGAGTTGGCATGAGTTAAGCCTGGGCTGGGTGTGTAGATGCCCCTCAACCAGCTaGTGCAGCTCAAAGACACTG +
Preference number: 4 (lower is better)
Translates to: GSHVGWSWHELSLGWVCRCPSTS*CSSKTL
Trigger: CAGTGTCTTTGAGCTGCAGCAGCTGGTTGAGGGGCA...TCTACACACCCAGCCCAGGCTTAACTCATGCCAACTCCACCCTACATGGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp CAGGGCAGCCATGTAGGGTGGAGTTGGCATGAGTTAAGCCTGGGCTGGGTGTGTGATGGTCTTGGGGCCTaGCTTCTGGTTCAGAACTAC +
Preference number: 4 (lower is better)
Translates to: QGSHVGWSWHELSLGWVCDGLGA*LLVQNY
Trigger: GTAGTTCTGAACCAGAAGGCAGGCCCCAAGACCATC...ACACACCCAGCCCAGGCTTAACTCATGCCAACTCCACCCTACATGGCTGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp CATGATGGCAGTGGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGGGCCTCCGTCTGGGCTaGTCACAAGACCTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: HDGSGRVPLGLLCLRPTAGLRLG*SQDLLF
Trigger: GAAAAGAAGGTCTTGTGAGCAGCCCAGACGGAGGCC...CGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCCACTGCCATCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR GCA 90 bp ACTGTGAGCAGGACTGCCAGGCCAGTGTCACAAGCGCTACCATCTGGGTGTAGAGGCCTCCGTCTGGGCTaGTCACAAGACCTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: TVSRTARPVSQALPSGCRGLRLG*SQDLLF
Trigger: GAAAAGAAGGTCTTGTGAGCAGCCCAGACGGAGGCC...TCTACACCCAGATGGTAGCGCTTGTGACACTGGCCTGGCAGTCCTGCTCACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp GTCTCCGGCATAGCAAGGAGGAACGGGAGGACCTGGAGGACATCAGCGAGGACCATGCCTAAGACCAACTaGGTTGGACACCATAAGCCA +
Preference number: 4 (lower is better)
Translates to: VSGIARRNGRTWRTSARTMPKTN*VGHHKP
Trigger: TGGCTTATGGTGTCCAACGCAGTTGGTCTTAGGCAT...GGTCCTCGCTGATGTCCTCCAGGTCCTCCCGTTCCTCCTTGCTATGCCGGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430477.6
CDS-3UTR CCA 90 bp GGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATACTTTCACGAGCCAGGTaGCCGTGGCAGCTGAAACAG +
Preference number: 4 (lower is better)
Translates to: GRVPLGLLCLRPTALDTILSRAR*PWQLKQ
Trigger: CTGTTTCAGCTGCCACGGCCACCTGGCTCGTGAAAG...TATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp GGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATACCTGGCTGCTGTCCTTaGCTGACACGTCAGCCATGT +
Preference number: 4 (lower is better)
Translates to: GRVPLGLLCLRPTALDTIPGCCP*LTRQPC
Trigger: ACATGGCTGACGTGTCAGCCAAGGACAGCAGCCAGG...TATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp GGCGTAGATGTGGAGGGCAGTGAGGAAGAAGAAACATCCAAGGCTGAAGCCAGGCCTGGCTGCTGTCCTTaGCTGACACGTCAGCCATGT +
Preference number: 4 (lower is better)
Translates to: GVDVEGSEEEETSKAEARPGCCP*LTRQPC
Trigger: ACATGGCTGACGTGTCAGCCAAGGACAGCAGCCAGG...CCTGGCTTCAGCCTTGGATGTTTCTTCTTCCTCACTGCCCTCCACATCTACGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565128.5
CDS-3UTR CCA 90 bp GGCGTAGATGTGGAGGGCAGTGAGGAAGAAGAAACATCCAAGGCTGAAGCCAGGTTCACCAGCGTCTCCTaGCTGCTGTCCTTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: GVDVEGSEEEETSKAEARFTSVS*LLSLAD
Trigger: GTCAGCCAAGGACAGCAGCCAGGAGACGCTGGTGAA...CCTGGCTTCAGCCTTGGATGTTTCTTCTTCCTCACTGCCCTCCACATCTACGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565128.5
CDS-3UTR CCA 90 bp GGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAGCGGCTCCATGCGATTaGCTGCAGTTGGGTCGAGTA +
Preference number: 4 (lower is better)
Translates to: GRVPLGLLCLRPTALDTIAAPCD*LQLGRV
Trigger: TACTCGACCCAACTGCAGCCAATCGCATGGAGCCGC...TATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp GGCAGCCATGTAGGGTGGAGTTGGCATGAGTTAAGCCTGGGCTGGGTGTGTAGACCCTTAGGATGGTCTTaGGGCCTGCCTTCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: GSHVGWSWHELSLGWVCRPLGWS*GLPSGS
Trigger: TGAACCAGAAGGCAGGCCCCAAGACCATCCTAAGGG...TCTACACACCCAGCCCAGGCTTAACTCATGCCAACTCCACCCTACATGGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp CATGATGGCAGTGGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGCCCTTAGGATGGTCTTaGGGCCTGCCTTCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: HDGSGRVPLGLLCLRPTAPLGWS*GLPSGS
Trigger: TGAACCAGAAGGCAGGCCCCAAGACCATCCTAAGGG...CGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCCACTGCCATCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp GGGTTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCATGGCCTTTGGGACTCTGGCGGCCCTTAGGATaGTCTTGGGGCCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: GLVIKASQSQSLAWPLGLWRPLG*SWGLPS
Trigger: AGAAGGCAGGCCCCAAGACCATCCTAAGGGCCGCCA...GAGTCCCAAAGGCCATGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp GGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAGCATCAGCCCATGTGTaGCGGCCCTTAGGATGGTCT +
Preference number: 4 (lower is better)
Translates to: GRVPLGLLCLRPTALDTIASAHV*RPLGWS
Trigger: AGACCATCCTAAGGGCCGCCACACATGGGCTGATGC...TATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp GTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCCACCTCCTCCAGCTCTGCTaGAAGGGGTCCATCTCCCTG +
Preference number: 4 (lower is better)
Translates to: VPLGLLCLRPTALDTISHLLQLC*KGSISL
Trigger: CAGGGAGATGGACCCCTTCCAGCAGAGCTGGAGGAG...GTGGCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp CCGTGTGGTCAACCTCAATGCCCTGCTCATGATGGCAGTGGCCGTGTTCCTCTGTCATCCACCTCTAGCTaGTGCTTCTCGGTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: PCGQPQCPAHDGSGRVPLSSTSS*CFSVFQ
Trigger: CTGGAAGACCGAGAAGCACCAGCTAGAGGTGGATGA...CAGAGGAACACGGCCACTGCCATCATGAGCAGGGCATTGAGGTTGACCACACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp CGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCGCTTGGGCCTCCGTCTaGGCTGCTCACAAGACCTTC +
Preference number: 4 (lower is better)
Translates to: RVPLGLLCLRPTALDTISAWASV*AAHKTF
Trigger: GAAGGTCTTGTGAGCAGCCCAGACGGAGGCCCAAGC...GCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp GTCAACCTCAATGCCCTGCTCATGATGGCAGTGGCCGTGTTCCTCTGGGGCTTCCCTGCTCTGGTTTTGTaGAATGAGCAGAGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: VNLNALLMMAVAVFLWGFPALVL*NEQRWG
Trigger: ACCCCACCTCTGCTCATTCCACAAAACCAGAGCAGG...GAAGCCCCAGAGGAACACGGCCACTGCCATCATGAGCAGGGCATTGAGGTTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp AGGCCAACGGCTTTAAACACAAGCTCAGGGGCTTGGGGTTTATCCCGAGGGCACAGGAACGGGAGGACCTaGATGCTGATGAGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: RPTALNTSSGAWGLSRGHRNGRT*MLMSSK
Trigger: CTTGCTGCTCATCAGCATCCAGGTCCTCCCGTTCCT...GTGCCCTCGGGATAAACCCCAAGCCCCTGAGCTTGTGTTTAAAGCCGTTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
CDS-3UTR CCA 90 bp CCGTGTGGTCAACCTCAATGCCCTGCTCATGATGGCAGTGGCCGTGTTCCTCTGCAGGCAGTGACGAGCTaGTGTGCAAGAGACTTTAGG +
Preference number: 4 (lower is better)
Translates to: PCGQPQCPAHDGSGRVPLQAVTS*CARDFR
Trigger: CCTAAAGTCTCTTGCACACCAGCTCGTCACTGCCTG...CAGAGGAACACGGCCACTGCCATCATGAGCAGGGCATTGAGGTTGACCACACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp CTCCCCAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGAACACAGGATCTGACTaGTGGGCACAATACCATCTT +
Preference number: 4 (lower is better)
Translates to: LPSSTAWSSVSGIARRNGNTGSD*WAQYHL
Trigger: AAGATGGTATTGTGCCCACCAGTCAGATCCTGTGTT...CCCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp GTCTCCGGCATAGCAAGGAGGAACGGGAGGACCTGGAGGACATCAGCGAGGACCAGCCAATCCTTGGCATaGCCTTTGGGACTCAAAACA +
Preference number: 4 (lower is better)
Translates to: VSGIARRNGRTWRTSARTSQSLA*PLGLKT
Trigger: TGTTTTGAGTCCCAAAGGCCATGCCAAGGATTGGCT...GGTCCTCGCTGATGTCCTCCAGGTCCTCCCGTTCCTCCTTGCTATGCCGGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430477.6
3UTR CAA 72 bp AGCAAGGCCAACGGCTTTAAACACAAGCTCAGGGGCTaGGGGTTTATCCCGAGGGCACAGGGCAGCCATGTA +
Preference number: 4 (lower is better)
Translates to: SKANGFKHKLRG*GFIPRAQGSHV
Trigger: TACATGGCTGCCCTGTGCCCTCGGGATAAACCCCAAGCCCCTGAGCTTGTGTTTAAAGCCGTTGGCCTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR TCA 90 bp GTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCCACGGTGGCCGTGGCAGCTaGAACAGTGGCTTTTGCGTT +
Preference number: 4 (lower is better)
Translates to: VPLGLLCLRPTALDTISHGGRGS*NSGFCV
Trigger: AACGCAAAAGCCACTGTTTCAGCTGCCACGGCCACC...GTGGCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR TCA 90 bp GGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAGCCCAGCATGCCAGTTaGATCTTTCACGAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: GRVPLGLLCLRPTALDTIAQHAS*IFHEPG
Trigger: ACCTGGCTCGTGAAAGATTCAACTGGCATGCTGGGC...TATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR TCA 90 bp CCGTGTGGTCAACCTCAATGCCCTGCTCATGATGGCAGTGGCCGTGTTCCTCTGACATGGCTACGTCATTaGGGATGTCCGCAAAAAGCC +
Preference number: 4 (lower is better)
Translates to: PCGQPQCPAHDGSGRVPLTWLRH*GCPQKA
Trigger: GGCTTTTTGCGGACATCCTCAATGACGTAGCCATGT...CAGAGGAACACGGCCACTGCCATCATGAGCAGGGCATTGAGGTTGACCACACGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR TCA 90 bp ACGGCTTTAAACACAAGCTCAGGGGCTTGGGGTTTATCCCGAGGGCACAGGGCAAGAAACATCCAAGGCTaGAGCCAGGGCAACCTGACA +
Preference number: 4 (lower is better)
Translates to: TALNTSSGAWGLSRGHRARNIQG*SQGNLT
Trigger: TGTCAGGTTGCCCTGGCTTCAGCCTTGGATGTTTCT...TGCCCTGTGCCCTCGGGATAAACCCCAAGCCCCTGAGCTTGTGTTTAAAGCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000430477.6
CDS-3UTR TCA 90 bp CATGATGGCAGTGGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGAGAAACATCCAAGGCTaGAGCCAGGGCAACCTGACA +
Preference number: 4 (lower is better)
Translates to: HDGSGRVPLGLLCLRPTARNIQG*SQGNLT
Trigger: TGTCAGGTTGCCCTGGCTTCAGCCTTGGATGTTTCT...CGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCCACTGCCATCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
CDS-3UTR TCA 90 bp GTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCCACGGGGCCCACTGCATCTaGTTGGCAGTCACTTCCCAT +
Preference number: 4 (lower is better)
Translates to: VPLGLLCLRPTALDTISHGAHCI*LAVTSH
Trigger: ATGGGAAGTGACTGCCAATCAGATGCAGTGGGCCCC...GTGGCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR TCA 90 bp AGCCAATCCTTGGCATGGCCTTTGGGACTCAAAACACAGGATCTGACTGGTGGGTCAATGCCCTGCTCATaGTGGCAGTGGCCGTGTTCC +
Preference number: 4 (lower is better)
Translates to: SQSLAWPLGLKTQDLTGGSMPCS*WQWPCS
Trigger: GGAACACGGCCACTGCCATCATGAGCAGGGCATTGA...CCCACCAGTCAGATCCTGTGTTTTGAGTCCCAAAGGCCATGCCAAGGATTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR TCA 90 bp ACGGCTTTAAACACAAGCTCAGGGGCTTGGGGTTTATCCCGAGGGCACAGGGCAAGAGTGCCATGGAGATaGATGGTAGGGCACCATGCT +
Preference number: 4 (lower is better)
Translates to: TALNTSSGAWGLSRGHRARVPWR*MVGHHA
Trigger: AGCATGGTGCCCTACCATTCATCTCCATGGCACTCT...TGCCCTGTGCCCTCGGGATAAACCCCAAGCCCCTGAGCTTGTGTTTAAAGCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
CDS-3UTR TCA 90 bp GTTGGCGTAGATGTGGAGGGCAGTGAGGAAGAAGAAACATCCAAGGCTGAAGCCGCCCAGCATGCCAGTTaGATCTGCACGGAATCCCAC +
Preference number: 4 (lower is better)
Translates to: VGVDVEGSEEEETSKAEAAQHAS*ICTESH
Trigger: GTGGGATTCCGTGCAGATTCAACTGGCATGCTGGGC...GGCTTCAGCCTTGGATGTTTCTTCTTCCTCACTGCCCTCCACATCTACGCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565128.5
CDS-3UTR TCA 90 bp ACACTCACGATGCACTTGGCTAGGTTGCTGGTGGAGACGGTCATGGTGAAACAGGCCCAGCATGCCAGTTaGATCTGCACGGAATCCCAC +
Preference number: 4 (lower is better)
Translates to: TLTMHLARLLVETVMVKQAQHAS*ICTESH
Trigger: GTGGGATTCCGTGCAGATTCAACTGGCATGCTGGGC...CTGTTTCACCATGACCGTCTCCACCAGCAACCTAGCCAAGTGCATCGTGAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567578.1
CDS-3UTR GCA 90 bp GTTGGCGTAGATGTGGAGGGCAGTGAGGAAGAAGAAACATCCAAGGCTGAAGCCACCAGGCAAAGACGATaGGGCCCAGCATGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: VGVDVEGSEEEETSKAEATRQRR*GPACQL
Trigger: CAACTGGCATGCTGGGCCGCATCGTCTTTGCCTGGT...GGCTTCAGCCTTGGATGTTTCTTCTTCCTCACTGCCCTCCACATCTACGCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565128.5
CDS-3UTR GCA 90 bp TCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGAGGACCTGGAGGACATCAGCGCATTGCAGTCCAGTTTaGTCCCTTTCCACCAGGCAA +
Preference number: 4 (lower is better)
Translates to: SSVSGIARRNGRTWRTSAHCSPV*SLSTRQ
Trigger: TTGCCTGGTGGAAAGGGAGCAAACTGGACTGCAATG...CGCTGATGTCCTCCAGGTCCTCCCGTTCCTCCTTGCTATGCCGGAGACTGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430477.6
CDS-3UTR GCA 90 bp GTGGAGACGGTCATGGTGAAACAGATTGGGTATACAGGAGCCATAATCTCAAGGTTCCTCCGAGCCTGGTaGACGGTCAGGGCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: VETVMVKQIGYTGAIISRFLRAW*TVRAAR
Trigger: TCGGGCTGCCCTGACCGTGCACCAGGCTCGGAGGAA...CCTTGAGATTATGGCTCCTGTATACCCAATCTGTTTCACCATGACCGTCTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567578.1
CDS-3UTR GCA 90 bp GTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCCACTCCACAGCGGCTCCATaGGATTGGCTGCAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: VPLGLLCLRPTALDTISHSTAAP*DWLQLG
Trigger: ACCCAACTGCAGCCAATCGCATGGAGCCGCTGTGGA...GTGGCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR GCA 90 bp GGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATATGCCCCTCAACCAGCTaGTGCAGCTCAAAGACACTG +
Preference number: 4 (lower is better)
Translates to: GRVPLGLLCLRPTALDTICPSTS*CSSKTL
Trigger: CAGTGTCTTTGAGCTGCAGCAGCTGGTTGAGGGGCA...TATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR GCA 90 bp CGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCTCCACCTCTAGCTGGTaGTTCTCGGTCTTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: RVPLGLLCLRPTALDTISSTSSW*FSVFQP
Trigger: CGGCTGGAAGACCGAGAAGCACCAGCTAGAGGTGGA...GCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR GCA 90 bp GGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAGGCCTCCGTCTGGGCTaGTCACAAGACCTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: GRVPLGLLCLRPTALDTIGLRLG*SQDLLF
Trigger: GAAAAGAAGGTCTTGTGAGCAGCCCAGACGGAGGCC...TATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR GCA 90 bp AGCCAATCCTTGGCATGGCCTTTGGGACTCAAAACACAGGATCTGACTGGTGGGGCCTGGCCCACCCGCTaGAGTTGCCCTAAGGAAAAA +
Preference number: 4 (lower is better)
Translates to: SQSLAWPLGLKTQDLTGGAWPTR*SCPKEK
Trigger: TTTTTCCTTAGGGCAACTGCAGCGGGTGGGCCAGGC...CCCACCAGTCAGATCCTGTGTTTTGAGTCCCAAAGGCCATGCCAAGGATTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp CATGATGGCAGTGGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGCCTCTGGGGCTTCTATaGCTAAGACCAACTGCGTTG +
Preference number: 4 (lower is better)
Translates to: HDGSGRVPLGLLCLRPTAPLGLL*LRPTAL
Trigger: CAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGG...CGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCCACTGCCATCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR GCA 90 bp ACTGTGAGCAGGACTGCCAGGCCAGTGTCACAAGCGCTACCATCTGGGTGTAGACCTCTGGGGCTTCTATaGCTAAGACCAACTGCGTTG +
Preference number: 4 (lower is better)
Translates to: TVSRTARPVSQALPSGCRPLGLL*LRPTAL
Trigger: CAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGG...TCTACACCCAGATGGTAGCGCTTGTGACACTGGCCTGGCAGTCCTGCTCACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp AGGCTTGATGTTGATGGGTTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCAGCAAGACTGCCTGGGTaGCTAGGGAGCCGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: RLDVDGLVIKASQSQSLAARLPG*LGSRRG
Trigger: GCCTCTCCGGCTCCCTAGCCACCCAGGCAGTCTTGC...TGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAACCCATCAACATCAAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp ACAGGATCTGACTGGTGGGCACAATACCATCTTGAACGCCCACAAAAAGGTTTGCCCAGCAAGACTGCCTaGGTGGCTAGGGAGCCGGAG +
Preference number: 4 (lower is better)
Translates to: TGSDWWAQYHLERPQKGLPSKTA*VAREPE
Trigger: CTCCGGCTCCCTAGCCACCCAGGCAGTCTTGCTGGG...CAAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGCCCACCAGTCAGATCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp GTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCCACCTTTCACGAGCCAGGTaGCCGTGGCAGCTGAAACAG +
Preference number: 4 (lower is better)
Translates to: VPLGLLCLRPTALDTISHLSRAR*PWQLKQ
Trigger: CTGTTTCAGCTGCCACGGCCACCTGGCTCGTGAAAG...GTGGCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp AGGCCAACGGCTTTAAACACAAGCTCAGGGGCTTGGGGTTTATCCCGAGGGCACCACTCACGATGCACTTaGCTAGGTTGCTGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: RPTALNTSSGAWGLSRGHHSRCT*LGCWWR
Trigger: TCTCCACCAGCAACCTAGCCAAGTGCATCGTGAGTG...GTGCCCTCGGGATAAACCCCAAGCCCCTGAGCTTGTGTTTAAAGCCGTTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp CCAGCAACACTCACGATGCACTTGGCTAGGTTGCTGGTGGAGACGGTCATGGTGCACTCACGATGCACTTaGCTAGGTTGCTGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: PATLTMHLARLLVETVMVHSRCT*LGCWWR
Trigger: TCTCCACCAGCAACCTAGCCAAGTGCATCGTGAGTG...CACCATGACCGTCTCCACCAGCAACCTAGCCAAGTGCATCGTGAGTGTTGCTGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567578.1
CDS-3UTR CCA 90 bp CGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCTTCACCAGCGTCTCCTaGCTGCTGTCCTTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: RVPLGLLCLRPTALDTISFTSVS*LLSLAD
Trigger: GTCAGCCAAGGACAGCAGCCAGGAGACGCTGGTGAA...GCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp GTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCCACTTCACCAGCGTCTCCTaGCTGCTGTCCTTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: VPLGLLCLRPTALDTISHFTSVS*LLSLAD
Trigger: GTCAGCCAAGGACAGCAGCCAGGAGACGCTGGTGAA...GTGGCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp CGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCGCGATTGGCTGCAGTTaGGTCGAGTACCTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: RVPLGLLCLRPTALDTISAIGCS*VEYLSP
Trigger: AGGGGAGAGGTACTCGACCCAACTGCAGCCAATCGC...GCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp AGGCCAACGGCTTTAAACACAAGCTCAGGGGCTTGGGGTTTATCCCGAGGGCACGCAGCTCAAAGACACTaGAGACCAAGCGGTGTAAGG +
Preference number: 4 (lower is better)
Translates to: RPTALNTSSGAWGLSRGHAAQRH*RPSGVR
Trigger: CCTTACACCGCTTGGTCTCCAGTGTCTTTGAGCTGC...GTGCCCTCGGGATAAACCCCAAGCCCCTGAGCTTGTGTTTAAAGCCGTTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp ACTGTGAGCAGGACTGCCAGGCCAGTGTCACAAGCGCTACCATCTGGGTGTAGATTGGGGCCTGCCTTCTaGTTCAGAACTACCTGTACC +
Preference number: 4 (lower is better)
Translates to: TVSRTARPVSQALPSGCRLGPAF*FRTTCT
Trigger: GGTACAGGTAGTTCTGAACCAGAAGGCAGGCCCCAA...TCTACACCCAGATGGTAGCGCTTGTGACACTGGCCTGGCAGTCCTGCTCACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp CGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCTCCCCTGTCCTGCTGTaGCCAAAGTGTCCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: RVPLGLLCLRPTALDTISSPVLL*PKCPCS
Trigger: GGAGCAAGGACACTTTGGCCACAGCAGGACAGGGGA...GCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp ACAGGATCTGACTGGTGGGCACAATACCATCTTGAACGCCCACAAAAAGGTTTGCTTCCCATGAGGGCCTaGCCCACCCGCTGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: TGSDWWAQYHLERPQKGLLPMRA*PTRCSC
Trigger: GCAACTGCAGCGGGTGGGCCAGGCCCTCATGGGAAG...CAAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGCCCACCAGTCAGATCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp AGGCTTGATGTTGATGGGTTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCAGGGGTGAGAAGGTCCTaGCTCCCCTTCTCCCGGCCT +
Preference number: 4 (lower is better)
Translates to: RLDVDGLVIKASQSQSLAGVRRS*LPFSRP
Trigger: AGGCCGGGAGAAGGGGAGCCAGGACCTTCTCACCCC...TGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAACCCATCAACATCAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp TTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCATGGCCTTTGGGACTCAAAGGGGTGAGAAGGTCCTaGCTCCCCTTCTCCCGGCCT +
Preference number: 4 (lower is better)
Translates to: LVIKASQSQSLAWPLGLKGVRRS*LPFSRP
Trigger: AGGCCGGGAGAAGGGGAGCCAGGACCTTCTCACCCC...TTTGAGTCCCAAAGGCCATGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp TTATTTGAACCGGCCTGGGGGAGGCTTGATGTTGATGGGTTGGTGATTAAAGCCCGAGCTGGGCCCGTGTaGTCAACCTCAATGCCCTGC +
Preference number: 4 (lower is better)
Translates to: LFEPAWGRLDVDGLVIKARAGPV*STSMPC
Trigger: GCAGGGCATTGAGGTTGACCACACGGGCCCAGCTCG...GGCTTTAATCACCAACCCATCAACATCAAGCCTCCCCCAGGCCGGTTCAAATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp TTATTTGAACCGGCCTGGGGGAGGCTTGATGTTGATGGGTTGGTGATTAAAGCCTGGAATGAGCAGAGGTaGGGTGGGCAGTCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: LFEPAWGRLDVDGLVIKAWNEQR*GGQSSA
Trigger: GGCGGAGGACTGCCCACCCCACCTCTGCTCATTCCA...GGCTTTAATCACCAACCCATCAACATCAAGCCTCCCCCAGGCCGGTTCAAATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
CDS-3UTR CCA 90 bp AGGCCAACGGCTTTAAACACAAGCTCAGGGGCTTGGGGTTTATCCCGAGGGCACCGCCAGTGCCTGCTCTaGTTTTGTGGAATGAGCAGA +
Preference number: 4 (lower is better)
Translates to: RPTALNTSSGAWGLSRGHRQCLL*FCGMSR
Trigger: TCTGCTCATTCCACAAAACCAGAGCAGGCACTGGCG...GTGCCCTCGGGATAAACCCCAAGCCCCTGAGCTTGTGTTTAAAGCCGTTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
CDS-3UTR CCA 90 bp CATGATGGCAGTGGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGACTCCCTGTACAGAATaGGTGCCCAGAGAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: HDGSGRVPLGLLCLRPTATPCTE*VPRECH
Trigger: ATGGCACTCTCTGGGCACCCATTCTGTACAGGGAGT...CGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCCACTGCCATCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
CDS-3UTR CCA 90 bp GGCAGCCATGTAGGGTGGAGTTGGCATGAGTTAAGCCTGGGCTGGGTGTGTAGAACTCCCTGTACAGAATaGGTGCCCAGAGAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: GSHVGWSWHELSLGWVCRTPCTE*VPRECH
Trigger: ATGGCACTCTCTGGGCACCCATTCTGTACAGGGAGT...TCTACACACCCAGCCCAGGCTTAACTCATGCCAACTCCACCCTACATGGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
CDS-3UTR CCA 90 bp ACGGCTTTAAACACAAGCTCAGGGGCTTGGGGTTTATCCCGAGGGCACAGGGCACAGGCAGTGACGAGCTaGTGTGCAAGAGACTTTAGG +
Preference number: 4 (lower is better)
Translates to: TALNTSSGAWGLSRGHRAQAVTS*CARDFR
Trigger: CCTAAAGTCTCTTGCACACCAGCTCGTCACTGCCTG...TGCCCTGTGCCCTCGGGATAAACCCCAAGCCCCTGAGCTTGTGTTTAAAGCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp CATGATGGCAGTGGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGGGCAGCCATGTAGGGTaGAGTTGGCATGAGTTAAGC +
Preference number: 4 (lower is better)
Translates to: HDGSGRVPLGLLCLRPTAGSHVG*SWHELS
Trigger: GCTTAACTCATGCCAACTCCACCCTACATGGCTGCC...CGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCCACTGCCATCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp GGGTTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCATGGCCTTTGGGACTCACAAGCTCAGGGGCTTaGGGTTTATCCCGAGGGCAC +
Preference number: 4 (lower is better)
Translates to: GLVIKASQSQSLAWPLGLTSSGA*GLSRGH
Trigger: GTGCCCTCGGGATAAACCCCAAGCCCCTGAGCTTGT...GAGTCCCAAAGGCCATGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp GGTGTGGAAGGATGGCCGGGTTTCTGCAGCAGCAGGAGGAAAGGGTGGGAGCACACAGGATCTGACTGGTaGGCACAATACCATCTTGAA +
Preference number: 4 (lower is better)
Translates to: GVEGWPGFCSSRRKGWEHTGSDW*AQYHLE
Trigger: TTCAAGATGGTATTGTGCCCACCAGTCAGATCCTGT...GTGCTCCCACCCTTTCCTCCTGCTGCTGCAGAAACCCGGCCATCCTTCCACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp CAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGAGGACAACACAGGATCTGACTaGTGGGCACAATACCATCTT +
Preference number: 4 (lower is better)
Translates to: QLHRLVFSLRHSKEEREDNTGSD*WAQYHL
Trigger: AAGATGGTATTGTGCCCACCAGTCAGATCCTGTGTT...GTCCTCCCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp GTCAACCTCAATGCCCTGCTCATGATGGCAGTGGCCGTGTTCCTCTGGGGCTTCCCTTGGCATGGCCTTTaGGACTCAAAACACAGGATC +
Preference number: 4 (lower is better)
Translates to: VNLNALLMMAVAVFLWGFPWHGL*DSKHRI
Trigger: GATCCTGTGTTTTGAGTCCCAAAGGCCATGCCAAGG...GAAGCCCCAGAGGAACACGGCCACTGCCATCATGAGCAGGGCATTGAGGTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp GTGAGCAGGACTGCCAGGCCAGTGTCACAAGCGCTACCATCTGGGTGTAGACAGCCTTGGCATGGCCTTTaGGACTCAAAACACAGGATC +
Preference number: 4 (lower is better)
Translates to: VSRTARPVSQALPSGCRQPWHGL*DSKHRI
Trigger: GATCCTGTGTTTTGAGTCCCAAAGGCCATGCCAAGG...CTGTCTACACCCAGATGGTAGCGCTTGTGACACTGGCCTGGCAGTCCTGCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR TCA 90 bp GTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCCACGCCCAGCATGCCAGTTaGATCTTTCACGAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: VPLGLLCLRPTALDTISHAQHAS*IFHEPG
Trigger: ACCTGGCTCGTGAAAGATTCAACTGGCATGCTGGGC...GTGGCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR TCA 90 bp CCGTGTGGTCAACCTCAATGCCCTGCTCATGATGGCAGTGGCCGTGTTCCTCTGTGGAGACGGTCATGGTaGAACAGATTGGGTATACAG +
Preference number: 4 (lower is better)
Translates to: PCGQPQCPAHDGSGRVPLWRRSW*NRLGIQ
Trigger: CTGTATACCCAATCTGTTTCACCATGACCGTCTCCA...CAGAGGAACACGGCCACTGCCATCATGAGCAGGGCATTGAGGTTGACCACACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR TCA 90 bp GTCAACCTCAATGCCCTGCTCATGATGGCAGTGGCCGTGTTCCTCTGGGGCTTCTGGAGACGGTCATGGTaGAACAGATTGGGTATACAG +
Preference number: 4 (lower is better)
Translates to: VNLNALLMMAVAVFLWGFWRRSW*NRLGIQ
Trigger: CTGTATACCCAATCTGTTTCACCATGACCGTCTCCA...GAAGCCCCAGAGGAACACGGCCACTGCCATCATGAGCAGGGCATTGAGGTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR TCA 90 bp GTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCCACGCTGCTGTCCTTGGCTaGCACGTCAGCCATGTTGTT +
Preference number: 4 (lower is better)
Translates to: VPLGLLCLRPTALDTISHAAVLG*HVSHVV
Trigger: AACAACATGGCTGACGTGTCAGCCAAGGACAGCAGC...GTGGCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR TCA 90 bp GATCTGACTGGTGGGCACAATACCATCTTGAACGCCCACAAAAAGGTTTGGTTTGGAGCATCAGGAGGCTaGCCAAGAGCCCCGCCAGGT +
Preference number: 4 (lower is better)
Translates to: DLTGGHNTILNAHKKVWFGASGG*PRAPPG
Trigger: ACCTGGCGGGGCTCTTGGTCAGCCTCCTGATGCTCC...AAACCAAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGCCCACCAGTCAGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR TCA 90 bp GATCTGACTGGTGGGCACAATACCATCTTGAACGCCCACAAAAAGGTTTGGTTTCGTTCAAGGTCTCCATaGCCAGGGCTCGGACCGCGC +
Preference number: 4 (lower is better)
Translates to: DLTGGHNTILNAHKKVWFRSRSP*PGLGPR
Trigger: GCGCGGTCCGAGCCCTGGTCATGGAGACCTTGAACG...AAACCAAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGCCCACCAGTCAGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR TCA 90 bp GTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCCACTCTGGTTTTGTGGAATaGGCAGAGGTGGGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: VPLGLLCLRPTALDTISHSGFVE*AEVGWA
Trigger: TGCCCACCCCACCTCTGCTCATTCCACAAAACCAGA...GTGGCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000567994.5
ENST00000570164.5
CDS-3UTR GCA 90 bp TTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCATGGCCTTTGGGACTCAAACGTTCCCCACCCCTATaGCCAGCAAGACTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: LVIKASQSQSLAWPLGLKRSPPL*PARLPG
Trigger: CCCAGGCAGTCTTGCTGGGCATAGGGGTGGGGAACG...TTTGAGTCCCAAAGGCCATGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp CATGATGGCAGTGGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTCCACTGCTTGGCATTaGAGTCCAGTTTGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: HDGSGRVPLGLLCLRPTASTAWH*SPVCSL
Trigger: AAGGGAGCAAACTGGACTGCAATGCCAAGCAGTGGA...CGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCCACTGCCATCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR GCA 90 bp GCACAATACCATCTTGAACGCCCACAAAAAGGTTTGGTTTTGTTGCCAAAGGGCTTCCTCCGAGCCTGGTaGACGGTCAGGGCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: AQYHLERPQKGLVLLPKGFLRAW*TVRAAR
Trigger: TCGGGCTGCCCTGACCGTGCACCAGGCTCGGAGGAA...GCCCTTTGGCAACAAAACCAAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp CGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCCCCTCAACCAGCTGCTaGAGCTCAAAGACACTGGAG +
Preference number: 4 (lower is better)
Translates to: RVPLGLLCLRPTALDTISPSTSC*SSKTLE
Trigger: CTCCAGTGTCTTTGAGCTGCAGCAGCTGGTTGAGGG...GCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR GCA 90 bp GTCAACCTCAATGCCCTGCTCATGATGGCAGTGGCCGTGTTCCTCTGGGGCTTCATGCCTAAGACCAACTaGGTTGGACACCATAAGCCA +
Preference number: 4 (lower is better)
Translates to: VNLNALLMMAVAVFLWGFMPKTN*VGHHKP
Trigger: TGGCTTATGGTGTCCAACGCAGTTGGTCTTAGGCAT...GAAGCCCCAGAGGAACACGGCCACTGCCATCATGAGCAGGGCATTGAGGTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR GCA 90 bp ACTGTGAGCAGGACTGCCAGGCCAGTGTCACAAGCGCTACCATCTGGGTGTAGATGTGGTCAACCTCAATaGCCTGCTCATGATGGCAGT +
Preference number: 4 (lower is better)
Translates to: TVSRTARPVSQALPSGCRCGQPQ*PAHDGS
Trigger: ACTGCCATCATGAGCAGGGCATTGAGGTTGACCACA...TCTACACCCAGATGGTAGCGCTTGTGACACTGGCCTGGCAGTCCTGCTCACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp GGGTTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCATGGCCTTTGGGACTCCCTGTACAGAATGGGTaGCCAGAGAGTGCCATGGAG +
Preference number: 4 (lower is better)
Translates to: GLVIKASQSQSLAWPLGLPVQNG*PESAME
Trigger: CTCCATGGCACTCTCTGGGCACCCATTCTGTACAGG...GAGTCCCAAAGGCCATGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
CDS-3UTR CCA 90 bp GTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCCACCCCTTAGGATGGTCTTaGGGCCTGCCTTCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: VPLGLLCLRPTALDTISHPLGWS*GLPSGS
Trigger: TGAACCAGAAGGCAGGCCCCAAGACCATCCTAAGGG...GTGGCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp TTATTTGAACCGGCCTGGGGGAGGCTTGATGTTGATGGGTTGGTGATTAAAGCCTGGCGGCCCTTAGGATaGTCTTGGGGCCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: LFEPAWGRLDVDGLVIKAWRPLG*SWGLPS
Trigger: AGAAGGCAGGCCCCAAGACCATCCTAAGGGCCGCCA...GGCTTTAATCACCAACCCATCAACATCAAGCCTCCCCCAGGCCGGTTCAAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp GGTGTGGAAGGATGGCCGGGTTTCTGCAGCAGCAGGAGGAAAGGGTGGGAGCACTCCTTTCAAGAACTTTaGGAACAGCATGTCCAACAC +
Preference number: 4 (lower is better)
Translates to: GVEGWPGFCSSRRKGWEHSFQEL*EQHVQH
Trigger: GTGTTGGACATGCTGTTCCCAAAGTTCTTGAAAGGA...GTGCTCCCACCCTTTCCTCCTGCTGCTGCAGAAACCCGGCCATCCTTCCACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp TCCCCTGTCCTGCTGTGGCCAAAGTGTCCTTGCTCCAGGTTCCTGCCCTGGGCTTCCTTTCAAGAACTTTaGGAACAGCATGTCCAACAC +
Preference number: 4 (lower is better)
Translates to: SPVLLWPKCPCSRFLPWASFQEL*EQHVQH
Trigger: GTGTTGGACATGCTGTTCCCAAAGTTCTTGAAAGGA...AGCCCAGGGCAGGAACCTGGAGCAAGGACACTTTGGCCACAGCAGGACAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp GGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATATCATCCACCTCTAGCTaGTGCTTCTCGGTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: GRVPLGLLCLRPTALDTISSTSS*CFSVFQ
Trigger: CTGGAAGACCGAGAAGCACCAGCTAGAGGTGGATGA...TATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp TTATTTGAACCGGCCTGGGGGAGGCTTGATGTTGATGGGTTGGTGATTAAAGCCCGGCCTTCCTCTGCCTaGGGCCCACTGCATCTGATT +
Preference number: 4 (lower is better)
Translates to: LFEPAWGRLDVDGLVIKARPSSA*GPLHLI
Trigger: AATCAGATGCAGTGGGCCCCAGGCAGAGGAAGGCCG...GGCTTTAATCACCAACCCATCAACATCAAGCCTCCCCCAGGCCGGTTCAAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp GGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATACGCCAGTGCCTGCTCTaGTTTTGTGGAATGAGCAGA +
Preference number: 4 (lower is better)
Translates to: GRVPLGLLCLRPTALDTIRQCLL*FCGMSR
Trigger: TCTGCTCATTCCACAAAACCAGAGCAGGCACTGGCG...TATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000567994.5
ENST00000570164.5
CDS-3UTR TCA 90 bp GGGTTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCATGGCCTTTGGGACTCAGAAACATCCAAGGCTaGAGCCAGGGCAACCTGACA +
Preference number: 4 (lower is better)
Translates to: GLVIKASQSQSLAWPLGLRNIQG*SQGNLT
Trigger: TGTCAGGTTGCCCTGGCTTCAGCCTTGGATGTTTCT...GAGTCCCAAAGGCCATGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000430477.6
CDS-3UTR TCA 90 bp CAGGGCAGCCATGTAGGGTGGAGTTGGCATGAGTTAAGCCTGGGCTGGGTGTGTGGCACAATACCATCTTaGACGCCCACAAAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: QGSHVGWSWHELSLGWVCGTIPS*TPTKRF
Trigger: AAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGCC...ACACACCCAGCCCAGGCTTAACTCATGCCAACTCCACCCTACATGGCTGCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR TCA 90 bp CATGATGGCAGTGGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTCAAAACACAGGATCTaGCTGGTGGGCACAATACCA +
Preference number: 4 (lower is better)
Translates to: HDGSGRVPLGLLCLRPTASKHRI*LVGTIP
Trigger: TGGTATTGTGCCCACCAGTCAGATCCTGTGTTTTGA...CGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCCACTGCCATCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR TCA 90 bp TTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCATGGCCTTTGGGACTCAAAAAGGCCAGGGCAACCTaGCACCAGAGGGAGCATCAG +
Preference number: 4 (lower is better)
Translates to: LVIKASQSQSLAWPLGLKKARAT*HQREHQ
Trigger: CTGATGCTCCCTCTGGTGTCAGGTTGCCCTGGCCTT...TTTGAGTCCCAAAGGCCATGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570164.5
CDS-3UTR GCA 90 bp TTATTTGAACCGGCCTGGGGGAGGCTTGATGTTGATGGGTTGGTGATTAAAGCCTCCACCTCTAGCTGGTaGTTCTCGGTCTTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: LFEPAWGRLDVDGLVIKASTSSW*FSVFQP
Trigger: CGGCTGGAAGACCGAGAAGCACCAGCTAGAGGTGGA...GGCTTTAATCACCAACCCATCAACATCAAGCCTCCCCCAGGCCGGTTCAAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp CCCGAGTGGCCCCACCAGCAACACTCACGATGCACTTGGCTAGGTTGCTGGTGGCATGGTGAAACAGATTaGGTATACAGGAGCCATAAT +
Preference number: 4 (lower is better)
Translates to: PEWPHQQHSRCTWLGCWWHGETD*VYRSHN
Trigger: ATTATGGCTCCTGTATACCCAATCTGTTTCACCATG...CCACCAGCAACCTAGCCAAGTGCATCGTGAGTGTTGCTGGTGGGGCCACTCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567578.1
CDS-3UTR CCA 90 bp CGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCCACTCACGATGCACTTaGCTAGGTTGCTGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: RVPLGLLCLRPTALDTISHSRCT*LGCWWR
Trigger: TCTCCACCAGCAACCTAGCCAAGTGCATCGTGAGTG...GCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp TTATTTGAACCGGCCTGGGGGAGGCTTGATGTTGATGGGTTGGTGATTAAAGCCTTCACCAGCGTCTCCTaGCTGCTGTCCTTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: LFEPAWGRLDVDGLVIKAFTSVS*LLSLAD
Trigger: GTCAGCCAAGGACAGCAGCCAGGAGACGCTGGTGAA...GGCTTTAATCACCAACCCATCAACATCAAGCCTCCCCCAGGCCGGTTCAAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp GATCTGACTGGTGGGCACAATACCATCTTGAACGCCCACAAAAAGGTTTGGTTTGGACCGCGCGGTAGTTaGCGTAGATGTGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: DLTGGHNTILNAHKKVWFGPRGS*RRCGGQ
Trigger: CTGCCCTCCACATCTACGCCAACTACCGCGCGGTCC...AAACCAAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGCCCACCAGTCAGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp AGCCAATCCTTGGCATGGCCTTTGGGACTCAAAACACAGGATCTGACTGGTGGGGCAGCTCAAAGACACTaGAGACCAAGCGGTGTAAGG +
Preference number: 4 (lower is better)
Translates to: SQSLAWPLGLKTQDLTGGAAQRH*RPSGVR
Trigger: CCTTACACCGCTTGGTCTCCAGTGTCTTTGAGCTGC...CCCACCAGTCAGATCCTGTGTTTTGAGTCCCAAAGGCCATGCCAAGGATTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp CGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCGCAGCTCAAAGACACTaGAGACCAAGCGGTGTAAGG +
Preference number: 4 (lower is better)
Translates to: RVPLGLLCLRPTALDTISAAQRH*RPSGVR
Trigger: CCTTACACCGCTTGGTCTCCAGTGTCTTTGAGCTGC...GCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp CGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCTCATCCACCTCTAGCTaGTGCTTCTCGGTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: RVPLGLLCLRPTALDTISSSTSS*CFSVFQ
Trigger: CTGGAAGACCGAGAAGCACCAGCTAGAGGTGGATGA...GCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp CGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCCGCCAGTGCCTGCTCTaGTTTTGTGGAATGAGCAGA +
Preference number: 4 (lower is better)
Translates to: RVPLGLLCLRPTALDTISRQCLL*FCGMSR
Trigger: TCTGCTCATTCCACAAAACCAGAGCAGGCACTGGCG...GCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp TGGGTAGGGCAGGCAGTGACGAGCTGGTGTGCAAGAGACTTTAGGGCCAGGCATGCCCACAAAAAGGTTTaGTTTTGTTGCCAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: WVGQAVTSWCARDFRARHAHKKV*FCCQRA
Trigger: TGCCCTTTGGCAACAAAACCAAACCTTTTTGTGGGC...ATGCCTGGCCCTAAAGTCTCTTGCACACCAGCTCGTCACTGCCTGCCCTACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp GTGAGCAGGACTGCCAGGCCAGTGTCACAAGCGCTACCATCTGGGTGTAGACAGACAGGATCTGACTGGTaGGCACAATACCATCTTGAA +
Preference number: 4 (lower is better)
Translates to: VSRTARPVSQALPSGCRQTGSDW*AQYHLE
Trigger: TTCAAGATGGTATTGTGCCCACCAGTCAGATCCTGT...CTGTCTACACCCAGATGGTAGCGCTTGTGACACTGGCCTGGCAGTCCTGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR TCA 90 bp GTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCCACACATGGCTACGTCATTaGGGATGTCCGCAAAAAGCC +
Preference number: 4 (lower is better)
Translates to: VPLGLLCLRPTALDTISHTWLRH*GCPQKA
Trigger: GGCTTTTTGCGGACATCCTCAATGACGTAGCCATGT...GTGGCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR TCA 90 bp AGGCTTGATGTTGATGGGTTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCAAGGGTGGAGTTGGCATaGGTTAAGCCTGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: RLDVDGLVIKASQSQSLARVELA*VKPGLG
Trigger: ACCCAGCCCAGGCTTAACTCATGCCAACTCCACCCT...TGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAACCCATCAACATCAAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR TCA 90 bp ACTGTGAGCAGGACTGCCAGGCCAGTGTCACAAGCGCTACCATCTGGGTGTAGATTAAATACATTTATTTaGACCGGCCTGGGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: TVSRTARPVSQALPSGCRLNTFI*TGLGEA
Trigger: AGCCTCCCCCAGGCCGGTTCAAATAAATGTATTTAA...TCTACACCCAGATGGTAGCGCTTGTGACACTGGCCTGGCAGTCCTGCTCACAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
CDS-3UTR GCA 90 bp GTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCCACCATTGCAGTCCAGTTTaGTCCCTTTCCACCAGGCAA +
Preference number: 4 (lower is better)
Translates to: VPLGLLCLRPTALDTISHHCSPV*SLSTRQ
Trigger: TTGCCTGGTGGAAAGGGAGCAAACTGGACTGCAATG...GTGGCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR GCA 90 bp AGCCAATCCTTGGCATGGCCTTTGGGACTCAAAACACAGGATCTGACTGGTGGGTCCACTGCTTGGCATTaGAGTCCAGTTTGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: SQSLAWPLGLKTQDLTGGSTAWH*SPVCSL
Trigger: AAGGGAGCAAACTGGACTGCAATGCCAAGCAGTGGA...CCCACCAGTCAGATCCTGTGTTTTGAGTCCCAAAGGCCATGCCAAGGATTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp GATCTGACTGGTGGGCACAATACCATCTTGAACGCCCACAAAAAGGTTTGGTTTCAGCTCCTCCAGCTCTaGTGGAAGGGGTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: DLTGGHNTILNAHKKVWFQLLQL*WKGSIS
Trigger: GGAGATGGACCCCTTCCAGCAGAGCTGGAGGAGCTG...AAACCAAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGCCCACCAGTCAGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp GGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATATTCCAGCCGGCATCCTaGAGTCCTTTCAAGAACTTT +
Preference number: 4 (lower is better)
Translates to: GRVPLGLLCLRPTALDTIFQPAS*SPFKNF
Trigger: AAAGTTCTTGAAAGGACTGCAGGATGCCGGCTGGAA...TATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp ACGGTCATGGTGAAACAGATTGGGTATACAGGAGCCATAATCTCAAGGAACATGTTGTTCCTCCGAGCCTaGTGCACGGTCAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: TVMVKQIGYTGAIISRNMLFLRA*CTVRAA
Trigger: GGCTGCCCTGACCGTGCACCAGGCTCGGAGGAACAA...CATGTTCCTTGAGATTATGGCTCCTGTATACCCAATCTGTTTCACCATGACCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567578.1
CDS-3UTR CCA 90 bp TTGCTGGTGGAGACGGTCATGGTGAAACAGATTGGGTATACAGGAGCCATAATCCCTGGCTGCTGTCCTTaGCTGACACGTCAGCCATGT +
Preference number: 4 (lower is better)
Translates to: LLVETVMVKQIGYTGAIIPGCCP*LTRQPC
Trigger: ACATGGCTGACGTGTCAGCCAAGGACAGCAGCCAGG...GATTATGGCTCCTGTATACCCAATCTGTTTCACCATGACCGTCTCCACCAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567578.1
CDS-3UTR CCA 90 bp TTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCATGGCCTTTGGGACTCAAAGCATCAGCCCATGTGTaGCGGCCCTTAGGATGGTCT +
Preference number: 4 (lower is better)
Translates to: LVIKASQSQSLAWPLGLKASAHV*RPLGWS
Trigger: AGACCATCCTAAGGGCCGCCACACATGGGCTGATGC...TTTGAGTCCCAAAGGCCATGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp ACAGGATCTGACTGGTGGGCACAATACCATCTTGAACGCCCACAAAAAGGTTTGGCATCAGCCCATGTGTaGCGGCCCTTAGGATGGTCT +
Preference number: 4 (lower is better)
Translates to: TGSDWWAQYHLERPQKGLASAHV*RPLGWS
Trigger: AGACCATCCTAAGGGCCGCCACACATGGGCTGATGC...CAAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGCCCACCAGTCAGATCCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp GATCTGACTGGTGGGCACAATACCATCTTGAACGCCCACAAAAAGGTTTGGTTTCTCCTCCAGCTCTGCTaGAAGGGGTCCATCTCCCTG +
Preference number: 4 (lower is better)
Translates to: DLTGGHNTILNAHKKVWFLLQLC*KGSISL
Trigger: CAGGGAGATGGACCCCTTCCAGCAGAGCTGGAGGAG...AAACCAAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGCCCACCAGTCAGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp CATGATGGCAGTGGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGGCCCACAAAAAGGTTTaGTTTTGTTGCCAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: HDGSGRVPLGLLCLRPTAAHKKV*FCCQRA
Trigger: TGCCCTTTGGCAACAAAACCAAACCTTTTTGTGGGC...CGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCCACTGCCATCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp ACGGCTTTAAACACAAGCTCAGGGGCTTGGGGTTTATCCCGAGGGCACAGGGCAAACACAGGATCTGACTaGTGGGCACAATACCATCTT +
Preference number: 4 (lower is better)
Translates to: TALNTSSGAWGLSRGHRANTGSD*WAQYHL
Trigger: AAGATGGTATTGTGCCCACCAGTCAGATCCTGTGTT...TGCCCTGTGCCCTCGGGATAAACCCCAAGCCCCTGAGCTTGTGTTTAAAGCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR TCA 90 bp CGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCTGGAGACGGTCATGGTaGAACAGATTGGGTATACAG +
Preference number: 4 (lower is better)
Translates to: RVPLGLLCLRPTALDTISWRRSW*NRLGIQ
Trigger: CTGTATACCCAATCTGTTTCACCATGACCGTCTCCA...GCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR TCA 90 bp GGGTTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCATGGCCTTTGGGACTCTGGAGACGGTCATGGTaGAACAGATTGGGTATACAG +
Preference number: 4 (lower is better)
Translates to: GLVIKASQSQSLAWPLGLWRRSW*NRLGIQ
Trigger: CTGTATACCCAATCTGTTTCACCATGACCGTCTCCA...GAGTCCCAAAGGCCATGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR TCA 90 bp AGGCTTGATGTTGATGGGTTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCACTGTACCTGGTTTTGTaGCTGGTCCCAGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: RLDVDGLVIKASQSQSLALYLVL*LVPAEE
Trigger: CTCCTCTGCTGGGACCAGTCACAAAACCAGGTACAG...TGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAACCCATCAACATCAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR TCA 90 bp GGGTTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCATGGCCTTTGGGACTCATGTTGATGGGTTGGTaGTTAAAGCCTCCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: GLVIKASQSQSLAWPLGLMLMGW*LKPPKA
Trigger: GGCTTTGGGAGGCTTTAATCACCAACCCATCAACAT...GAGTCCCAAAGGCCATGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp GTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCCACTTCCAGCCGGCATCCTaGAGTCCTTTCAAGAACTTT +
Preference number: 4 (lower is better)
Translates to: VPLGLLCLRPTALDTISHFQPAS*SPFKNF
Trigger: AAAGTTCTTGAAAGGACTGCAGGATGCCGGCTGGAA...GTGGCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR GCA 90 bp GATCTGACTGGTGGGCACAATACCATCTTGAACGCCCACAAAAAGGTTTGGTTTTGGCCAAAGTGTCCTTaGTCCAGGTTCCTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: DLTGGHNTILNAHKKVWFWPKCP*SRFLPW
Trigger: CCAGGGCAGGAACCTGGAGCAAGGACACTTTGGCCA...AAACCAAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGCCCACCAGTCAGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp TTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCATGGCCTTTGGGACTCAAACCTGTACAGAATGGGTaGCCAGAGAGTGCCATGGAG +
Preference number: 4 (lower is better)
Translates to: LVIKASQSQSLAWPLGLKPVQNG*PESAME
Trigger: CTCCATGGCACTCTCTGGGCACCCATTCTGTACAGG...TTTGAGTCCCAAAGGCCATGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
CDS-3UTR CCA 90 bp AGCAGGACTGCCAGGCCAGTGTCACAAGCGCTACCATCTGGGTGTAGACAGACCCATGGTGAAACAGATTaGGTATACAGGAGCCATAAT +
Preference number: 4 (lower is better)
Translates to: SRTARPVSQALPSGCRQTHGETD*VYRSHN
Trigger: ATTATGGCTCCTGTATACCCAATCTGTTTCACCATG...GGTCTGTCTACACCCAGATGGTAGCGCTTGTGACACTGGCCTGGCAGTCCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp GTGAGCAGGACTGCCAGGCCAGTGTCACAAGCGCTACCATCTGGGTGTAGACAGCATGGTGAAACAGATTaGGTATACAGGAGCCATAAT +
Preference number: 4 (lower is better)
Translates to: VSRTARPVSQALPSGCRQHGETD*VYRSHN
Trigger: ATTATGGCTCCTGTATACCCAATCTGTTTCACCATG...CTGTCTACACCCAGATGGTAGCGCTTGTGACACTGGCCTGGCAGTCCTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp TTATTTGAACCGGCCTGGGGGAGGCTTGATGTTGATGGGTTGGTGATTAAAGCCTTGGGGCCTGCCTTCTaGTTCAGAACTACCTGTACC +
Preference number: 4 (lower is better)
Translates to: LFEPAWGRLDVDGLVIKALGPAF*FRTTCT
Trigger: GGTACAGGTAGTTCTGAACCAGAAGGCAGGCCCCAA...GGCTTTAATCACCAACCCATCAACATCAAGCCTCCCCCAGGCCGGTTCAAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp TTATTTGAACCGGCCTGGGGGAGGCTTGATGTTGATGGGTTGGTGATTAAAGCCGGCAGCCATGTAGGGTaGAGTTGGCATGAGTTAAGC +
Preference number: 4 (lower is better)
Translates to: LFEPAWGRLDVDGLVIKAGSHVG*SWHELS
Trigger: GCTTAACTCATGCCAACTCCACCCTACATGGCTGCC...GGCTTTAATCACCAACCCATCAACATCAAGCCTCCCCCAGGCCGGTTCAAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp GGGTTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCATGGCCTTTGGGACTCAGCCAATCCTTGGCATaGCCTTTGGGACTCAAAACA +
Preference number: 4 (lower is better)
Translates to: GLVIKASQSQSLAWPLGLSQSLA*PLGLKT
Trigger: TGTTTTGAGTCCCAAAGGCCATGCCAAGGATTGGCT...GAGTCCCAAAGGCCATGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR CAA 72 bp TGGGCACAATACCATCTTGAACGCCCACAAAAAGGTTaGGTTTTGTTGCCAAAGGGCAGGTGGCTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: WAQYHLERPQKG*VLLPKGRWLQA
Trigger: TGCCTGGAGCCACCTGCCCTTTGGCAACAAAACCAAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR CAA 72 bp ATTAAAGCCTCCCAAAGCCAATCCTTGGCATGGCCTTaGGGACTCAAAACACAGGATCTGACTGGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: IKASQSQSLAWP*GLKTQDLTGGH
Trigger: GTGCCCACCAGTCAGATCCTGTGTTTTGAGTCCCAAAGGCCATGCCAAGGATTGGCTTTGGGAGGCTTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR TCA 90 bp CTCACGATGCACTTGGCTAGGTTGCTGGTGGAGACGGTCATGGTGAAACAGATTTGGAGACGGTCATGGTaGAACAGATTGGGTATACAG +
Preference number: 4 (lower is better)
Translates to: LTMHLARLLVETVMVKQIWRRSW*NRLGIQ
Trigger: CTGTATACCCAATCTGTTTCACCATGACCGTCTCCA...AATCTGTTTCACCATGACCGTCTCCACCAGCAACCTAGCCAAGTGCATCGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567578.1
CDS-3UTR TCA 90 bp GCACAATACCATCTTGAACGCCCACAAAAAGGTTTGGTTTTGTTGCCAAAGGGCGCTGCTGTCCTTGGCTaGCACGTCAGCCATGTTGTT +
Preference number: 4 (lower is better)
Translates to: AQYHLERPQKGLVLLPKGAAVLG*HVSHVV
Trigger: AACAACATGGCTGACGTGTCAGCCAAGGACAGCAGC...GCCCTTTGGCAACAAAACCAAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR TCA 90 bp TTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCATGGCCTTTGGGACTCAAAAGAGTGCCATGGAGATaGATGGTAGGGCACCATGCT +
Preference number: 4 (lower is better)
Translates to: LVIKASQSQSLAWPLGLKRVPWR*MVGHHA
Trigger: AGCATGGTGCCCTACCATTCATCTCCATGGCACTCT...TTTGAGTCCCAAAGGCCATGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
CDS-3UTR GCA 90 bp ACAGGATCTGACTGGTGGGCACAATACCATCTTGAACGCCCACAAAAAGGTTTGCGATGCGGCCCAGCATaGCAGTTGAATCTTTCACGA +
Preference number: 4 (lower is better)
Translates to: TGSDWWAQYHLERPQKGLRCGPA*QLNLSR
Trigger: TCGTGAAAGATTCAACTGGCATGCTGGGCCGCATCG...CAAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGCCCACCAGTCAGATCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp GCACAATACCATCTTGAACGCCCACAAAAAGGTTTGGTTTTGTTGCCAAAGGGCTGCACTTGGCTAGGTTaGTGGTGGAGACGGTCATGG +
Preference number: 4 (lower is better)
Translates to: AQYHLERPQKGLVLLPKGCTWLG*WWRRSW
Trigger: CCATGACCGTCTCCACCAGCAACCTAGCCAAGTGCA...GCCCTTTGGCAACAAAACCAAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp GATCTGACTGGTGGGCACAATACCATCTTGAACGCCCACAAAAAGGTTTGGTTTCTCCATGCGATTGGCTaGAGTTGGGTCGAGTACCTC +
Preference number: 4 (lower is better)
Translates to: DLTGGHNTILNAHKKVWFLHAIG*SWVEYL
Trigger: GAGGTACTCGACCCAACTGCAGCCAATCGCATGGAG...AAACCAAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGCCCACCAGTCAGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp AGGCTTGATGTTGATGGGTTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCAGATGGTCTTGGGGCCTaGCTTCTGGTTCAGAACTAC +
Preference number: 4 (lower is better)
Translates to: RLDVDGLVIKASQSQSLADGLGA*LLVQNY
Trigger: GTAGTTCTGAACCAGAAGGCAGGCCCCAAGACCATC...TGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAACCCATCAACATCAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp AGGCTTGATGTTGATGGGTTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCACCTCTGGGGCTTCTATaGCTAAGACCAACTGCGTTG +
Preference number: 4 (lower is better)
Translates to: RLDVDGLVIKASQSQSLAPLGLL*LRPTAL
Trigger: CAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGG...TGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAACCCATCAACATCAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp AGGCCAACGGCTTTAAACACAAGCTCAGGGGCTTGGGGTTTATCCCGAGGGCACCATGGTGAAACAGATTaGGTATACAGGAGCCATAAT +
Preference number: 4 (lower is better)
Translates to: RPTALNTSSGAWGLSRGHHGETD*VYRSHN
Trigger: ATTATGGCTCCTGTATACCCAATCTGTTTCACCATG...GTGCCCTCGGGATAAACCCCAAGCCCCTGAGCTTGTGTTTAAAGCCGTTGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp AGGCTTGATGTTGATGGGTTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCATTGGGGCCTGCCTTCTaGTTCAGAACTACCTGTACC +
Preference number: 4 (lower is better)
Translates to: RLDVDGLVIKASQSQSLALGPAF*FRTTCT
Trigger: GGTACAGGTAGTTCTGAACCAGAAGGCAGGCCCCAA...TGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAACCCATCAACATCAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp GGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATATCCTTTCAAGAACTTTaGGAACAGCATGTCCAACAC +
Preference number: 4 (lower is better)
Translates to: GRVPLGLLCLRPTALDTISFQEL*EQHVQH
Trigger: GTGTTGGACATGCTGTTCCCAAAGTTCTTGAAAGGA...TATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp AGGCTTGATGTTGATGGGTTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCACAGGCAGTGACGAGCTaGTGTGCAAGAGACTTTAGG +
Preference number: 4 (lower is better)
Translates to: RLDVDGLVIKASQSQSLAQAVTS*CARDFR
Trigger: CCTAAAGTCTCTTGCACACCAGCTCGTCACTGCCTG...TGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAACCCATCAACATCAAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
3UTR CAA 72 bp GATGGGTTGGTGATTAAAGCCTCCCAAAGCCAATCCTaGGCATGGCCTTTGGGACTCAAAACACAGGATCTG +
Preference number: 4 (lower is better)
Translates to: DGLVIKASQSQS*AWPLGLKTQDL
Trigger: CAGATCCTGTGTTTTGAGTCCCAAAGGCCATGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAACCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR TCA 90 bp ACGGTCATGGTGAAACAGATTGGGTATACAGGAGCCATAATCTCAAGGAACATGGCTGCTGTCCTTGGCTaGCACGTCAGCCATGTTGTT +
Preference number: 4 (lower is better)
Translates to: TVMVKQIGYTGAIISRNMAAVLG*HVSHVV
Trigger: AACAACATGGCTGACGTGTCAGCCAAGGACAGCAGC...CATGTTCCTTGAGATTATGGCTCCTGTATACCCAATCTGTTTCACCATGACCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567578.1
CDS-3UTR GCA 90 bp AGGCTTGATGTTGATGGGTTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCATCCACTGCTTGGCATTaGAGTCCAGTTTGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: RLDVDGLVIKASQSQSLASTAWH*SPVCSL
Trigger: AAGGGAGCAAACTGGACTGCAATGCCAAGCAGTGGA...TGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAACCCATCAACATCAAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp AGGCTTGATGTTGATGGGTTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCATGTGGTCAACCTCAATaGCCTGCTCATGATGGCAGT +
Preference number: 4 (lower is better)
Translates to: RLDVDGLVIKASQSQSLACGQPQ*PAHDGS
Trigger: ACTGCCATCATGAGCAGGGCATTGAGGTTGACCACA...TGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAACCCATCAACATCAAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp ACAGGATCTGACTGGTGGGCACAATACCATCTTGAACGCCCACAAAAAGGTTTGTTCCCGCAAACTAACTaGAGGGCCTCAATTTCCCTC +
Preference number: 4 (lower is better)
Translates to: TGSDWWAQYHLERPQKGLFPQTN*RASISL
Trigger: GAGGGAAATTGAGGCCCTGCAGTTAGTTTGCGGGAA...CAAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGCCCACCAGTCAGATCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
CDS-3UTR CCA 90 bp GATCTGACTGGTGGGCACAATACCATCTTGAACGCCCACAAAAAGGTTTGGTTTCACTCACGATGCACTTaGCTAGGTTGCTGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: DLTGGHNTILNAHKKVWFHSRCT*LGCWWR
Trigger: TCTCCACCAGCAACCTAGCCAAGTGCATCGTGAGTG...AAACCAAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGCCCACCAGTCAGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp CGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCTCCTTTCAAGAACTTTaGGAACAGCATGTCCAACAC +
Preference number: 4 (lower is better)
Translates to: RVPLGLLCLRPTALDTISSFQEL*EQHVQH
Trigger: GTGTTGGACATGCTGTTCCCAAAGTTCTTGAAAGGA...GCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp GCACAATACCATCTTGAACGCCCACAAAAAGGTTTGGTTTTGTTGCCAAAGGGCTCATCCACCTCTAGCTaGTGCTTCTCGGTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: AQYHLERPQKGLVLLPKGSSTSS*CFSVFQ
Trigger: CTGGAAGACCGAGAAGCACCAGCTAGAGGTGGATGA...GCCCTTTGGCAACAAAACCAAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp GCACAATACCATCTTGAACGCCCACAAAAAGGTTTGGTTTTGTTGCCAAAGGGCCAAGAGATCTGGGTGTaGAAGGATGGCCGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: AQYHLERPQKGLVLLPKGQEIWV*KDGRVS
Trigger: AGAAACCCGGCCATCCTTCCACACCCAGATCTCTTG...GCCCTTTGGCAACAAAACCAAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp GATCTGACTGGTGGGCACAATACCATCTTGAACGCCCACAAAAAGGTTTGGTTTCCCAAAGCCAATCCTTaGCATGGCCTTTGGGACTCA +
Preference number: 4 (lower is better)
Translates to: DLTGGHNTILNAHKKVWFPKANP*HGLWDS
Trigger: TGAGTCCCAAAGGCCATGCCAAGGATTGGCTTTGGG...AAACCAAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGCCCACCAGTCAGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR TCA 90 bp TTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCATGGCCTTTGGGACTCAAATCAAAACACAGGATCTaGCTGGTGGGCACAATACCA +
Preference number: 4 (lower is better)
Translates to: LVIKASQSQSLAWPLGLKSKHRI*LVGTIP
Trigger: TGGTATTGTGCCCACCAGTCAGATCCTGTGTTTTGA...TTTGAGTCCCAAAGGCCATGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR TCA 90 bp TTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCATGGCCTTTGGGACTCAAAATGTTGATGGGTTGGTaGTTAAAGCCTCCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: LVIKASQSQSLAWPLGLKMLMGW*LKPPKA
Trigger: GGCTTTGGGAGGCTTTAATCACCAACCCATCAACAT...TTTGAGTCCCAAAGGCCATGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp TTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCATGGCCTTTGGGACTCAAATTCCAGCCGGCATCCTaGAGTCCTTTCAAGAACTTT +
Preference number: 4 (lower is better)
Translates to: LVIKASQSQSLAWPLGLKFQPAS*SPFKNF
Trigger: AAAGTTCTTGAAAGGACTGCAGGATGCCGGCTGGAA...TTTGAGTCCCAAAGGCCATGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp AGGCTTGATGTTGATGGGTTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCAATGCCTAAGACCAACTaGGTTGGACACCATAAGCCA +
Preference number: 4 (lower is better)
Translates to: RLDVDGLVIKASQSQSLAMPKTN*VGHHKP
Trigger: TGGCTTATGGTGTCCAACGCAGTTGGTCTTAGGCAT...TGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAACCCATCAACATCAAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR GCA 90 bp GATCTGACTGGTGGGCACAATACCATCTTGAACGCCCACAAAAAGGTTTGGTTTTTCCCGCAAACTAACTaGAGGGCCTCAATTTCCCTC +
Preference number: 4 (lower is better)
Translates to: DLTGGHNTILNAHKKVWFFPQTN*RASISL
Trigger: GAGGGAAATTGAGGCCCTGCAGTTAGTTTGCGGGAA...AAACCAAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGCCCACCAGTCAGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
CDS-3UTR CCA 90 bp GTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCCACCATGGTGAAACAGATTaGGTATACAGGAGCCATAAT +
Preference number: 4 (lower is better)
Translates to: VPLGLLCLRPTALDTISHHGETD*VYRSHN
Trigger: ATTATGGCTCCTGTATACCCAATCTGTTTCACCATG...GTGGCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CCA 90 bp GATCTGACTGGTGGGCACAATACCATCTTGAACGCCCACAAAAAGGTTTGGTTTAGCCAATCCTTGGCATaGCCTTTGGGACTCAAAACA +
Preference number: 4 (lower is better)
Translates to: DLTGGHNTILNAHKKVWFSQSLA*PLGLKT
Trigger: TGTTTTGAGTCCCAAAGGCCATGCCAAGGATTGGCT...AAACCAAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGCCCACCAGTCAGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR TCA 90 bp GCACAATACCATCTTGAACGCCCACAAAAAGGTTTGGTTTTGTTGCCAAAGGGCGGCACAATACCATCTTaGACGCCCACAAAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: AQYHLERPQKGLVLLPKGGTIPS*TPTKRF
Trigger: AAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGCC...GCCCTTTGGCAACAAAACCAAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CCA 90 bp GCACAATACCATCTTGAACGCCCACAAAAAGGTTTGGTTTTGTTGCCAAAGGGCGCCCACAAAAAGGTTTaGTTTTGTTGCCAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: AQYHLERPQKGLVLLPKGAHKKV*FCCQRA
Trigger: TGCCCTTTGGCAACAAAACCAAACCTTTTTGTGGGC...GCCCTTTGGCAACAAAACCAAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp AGCAGAGGTGGGGTGGGCAGTCCTCCGCCCCTTACCCAGGAGGAGGCAGCGGCATCTCGTCCTTCAGGTTaGACCGTGAAGGCCCTGGAG +
Preference number: 5 (lower is better)
Translates to: SRGGVGSPPPLTQEEAAASRPSG*TVKALE
Trigger: CTCCAGGGCCTTCACGGTCAAACCTGAAGGACGAGA...TGCCGCTGCCTCCTCCTGGGTAAGGGGCGGAGGACTGCCCACCCCACCTCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
CDS-3UTR CAA 90 bp AGCAGAGGTGGGGTGGGCAGTCCTCCGCCCCTTACCCAGGAGGAGGCAGCGGCAGGCCCAGCATGCCAGTaGAATCTTTCACGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: SRGGVGSPPPLTQEEAAAGPACQ*NLSRAR
Trigger: CCTGGCTCGTGAAAGATTCAACTGGCATGCTGGGCC...TGCCGCTGCCTCCTCCTGGGTAAGGGGCGGAGGACTGCCCACCCCACCTCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000567994.5
ENST00000570164.5
CDS TCA 90 bp ACGCCTGCACGGAATCCCACAGCTGGTAGGGCAAGTAGTCCGGGCTaGCGCTATCAGGGAAGCCCTGAGGCAGGAACACGGCCTGGAGCC +
Preference number: 5 (lower is better)
Translates to: TPARNPTAGRASSPG*RYQGSPEAGTRPGA
Trigger: GGCTCCAGGCCGTGTTCCTGCCTCAGGGCTTCCCTGATAGCGTCAGCCCGGACTACTTGCCCTACCAGCTGTGGGATTCCGTGCAGGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000541442.5
ENST00000570164.5
CDS TCA 90 bp AGTGCTTCAGGACCAGCCGGAGCCGGCCTTCGTTCAAGGTCTCCATaGCCAGGGCTCGGACCGCGCGGTAGTTGGCGTAGATGTGGAGGG +
Preference number: 5 (lower is better)
Translates to: SASGPAGAGLRSRSP*PGLGPRGSWRRCGG
Trigger: CCCTCCACATCTACGCCAACTACCGCGCGGTCCGAGCCCTGGTCATGGAGACCTTGAACGAAGGCCGGCTCCGGCTGGTCCTGAAGCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000541442.5
ENST00000567673.5
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CAA 90 bp AGCAGAGGTGGGGTGGGCAGTCCTCCGCCCCTTACCCAGGAGGAGGCAGCGGCAATGCACTTGGCTAGGTaGCTGGTGGAGACGGTCATG +
Preference number: 5 (lower is better)
Translates to: SRGGVGSPPPLTQEEAAAMHLAR*LVETVM
Trigger: CATGACCGTCTCCACCAGCAACCTAGCCAAGTGCAT...TGCCGCTGCCTCCTCCTGGGTAAGGGGCGGAGGACTGCCCACCCCACCTCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CAA 90 bp CAGGAGGCTGACCAAGAGCCCCGCCAGGTTCACCAGCGTCTCCTGGCTGCTGTCGACACGTCAGCCATGTaGTTCCTCCGAGCCTGGTGC +
Preference number: 5 (lower is better)
Translates to: QEADQEPRQVHQRLLAAVDTSAM*FLRAWC
Trigger: GCACCAGGCTCGGAGGAACAACATGGCTGACGTGTC...GACAGCAGCCAGGAGACGCTGGTGAACCTGGCGGGGCTCTTGGTCAGCCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565128.5
CDS-3UTR CAA 90 bp AGCAGAGGTGGGGTGGGCAGTCCTCCGCCCCTTACCCAGGAGGAGGCAGCGGCAACTTCGTGTGTCTCCTaGACGACGACCCAGCTCTCT +
Preference number: 5 (lower is better)
Translates to: SRGGVGSPPPLTQEEAAATSCVS*TTTQLS
Trigger: AGAGAGCTGGGTCGTCGTCAAGGAGACACACGAAGT...TGCCGCTGCCTCCTCCTGGGTAAGGGGCGGAGGACTGCCCACCCCACCTCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CAA 90 bp CGTCAGCCATGTTGTTCCTCCGAGCCTGGTGCACGGTCAGGGCAGCCCGAGTGGTCTCGTCCTTCAGGTTaGACCGTGAAGGCCCTGGAG +
Preference number: 5 (lower is better)
Translates to: RQPCCSSEPGARSGQPEWSRPSG*TVKALE
Trigger: CTCCAGGGCCTTCACGGTCAAACCTGAAGGACGAGA...CCACTCGGGCTGCCCTGACCGTGCACCAGGCTCGGAGGAACAACATGGCTGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567578.1
CDS-3UTR CAA 90 bp CTCCCCAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGTGCGATTGGCTGCAGTaGGGTCGAGTACCTCTCCCC +
Preference number: 5 (lower is better)
Translates to: LPSSTAWSSVSGIARRNGCDWLQ*GRVPLP
Trigger: GGGGAGAGGTACTCGACCCAACTGCAGCCAATCGCA...CCCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp AGCAGAGGTGGGGTGGGCAGTCCTCCGCCCCTTACCCAGGAGGAGGCAGCGGCACTAAGACCAACTGCGTaGGACACCATAAGCCACAGC +
Preference number: 5 (lower is better)
Translates to: SRGGVGSPPPLTQEEAAALRPTA*DTISHS
Trigger: GCTGTGGCTTATGGTGTCCAACGCAGTTGGTCTTAG...TGCCGCTGCCTCCTCCTGGGTAAGGGGCGGAGGACTGCCCACCCCACCTCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CAA 90 bp CAGGAGGCTGACCAAGAGCCCCGCCAGGTTCACCAGCGTCTCCTGGCTGCTGTCGGCCCAGCATGCCAGTaGAATCTGCACGGAATCCCA +
Preference number: 5 (lower is better)
Translates to: QEADQEPRQVHQRLLAAVGPACQ*NLHGIP
Trigger: TGGGATTCCGTGCAGATTCAACTGGCATGCTGGGCC...GACAGCAGCCAGGAGACGCTGGTGAACCTGGCGGGGCTCTTGGTCAGCCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565128.5
CDS TCA 90 bp GAATCTGCACGGAATCCCACAGCTGGTAGGGCAAGTAGTCCGGGCTaGCGCTATCAGGGAAGCCCTGAGGCAGGAACACGGCCTGGAGCC +
Preference number: 5 (lower is better)
Translates to: ESARNPTAGRASSPG*RYQGSPEAGTRPGA
Trigger: GGCTCCAGGCCGTGTTCCTGCCTCAGGGCTTCCCTGATAGCGTCAGCCCGGACTACTTGCCCTACCAGCTGTGGGATTCCGTGCAGATTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565128.5
ENST00000567578.1
CDS CCA 90 bp CCATGTTGTTCCTCCGAGCCTGGTGCACGGTCAGGGCAGCCCGAGTaGCCCCACCAGCAACACTCACGATGCACCTTTCCACCAGGCAAA +
Preference number: 5 (lower is better)
Translates to: PCCSSEPGARSGQPE*PHQQHSRCTFPPGK
Trigger: TTTGCCTGGTGGAAAGGTGCATCGTGAGTGTTGCTGGTGGGGCCACTCGGGCTGCCCTGACCGTGCACCAGGCTCGGAGGAACAACATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541442.5
ENST00000565128.5
CDS-3UTR CAA 90 bp AGGCTGACCAAGAGCCCCGCCAGGTTCACCAGCGTCTCCTGGCTGCTGTCCTTGTCTCGTCCTTCAGGTTaGACCGTGAAGGCCCTGGAG +
Preference number: 5 (lower is better)
Translates to: RLTKSPARFTSVSWLLSLSRPSG*TVKALE
Trigger: CTCCAGGGCCTTCACGGTCAAACCTGAAGGACGAGA...CAAGGACAGCAGCCAGGAGACGCTGGTGAACCTGGCGGGGCTCTTGGTCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565128.5
ENST00000567578.1
CDS-3UTR CAA 90 bp AGCAGAGGTGGGGTGGGCAGTCCTCCGCCCCTTACCCAGGAGGAGGCAGCGGCAAAAAGCCTCCACTGCTaGGCATTGCAGTCCAGTTTG +
Preference number: 5 (lower is better)
Translates to: SRGGVGSPPPLTQEEAAAKSLHC*ALQSSL
Trigger: CAAACTGGACTGCAATGCCAAGCAGTGGAGGCTTTT...TGCCGCTGCCTCCTCCTGGGTAAGGGGCGGAGGACTGCCCACCCCACCTCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CAA 90 bp TTCCCCTGTCCTGCTGTGGCCAAAGTGTCCTTGCTCCAGGTTCCTGCCCTGGGCGCCCTTAGGATGGTCTaGGGGCCTGCCTTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: FPCPAVAKVSLLQVPALGALRMV*GPAFWF
Trigger: GAACCAGAAGGCAGGCCCCAAGACCATCCTAAGGGC...GCCCAGGGCAGGAACCTGGAGCAAGGACACTTTGGCCACAGCAGGACAGGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CAA 90 bp GGTGTGGAAGGATGGCCGGGTTTCTGCAGCAGCAGGAGGAAAGGGTGGGAGCACCACAAGCTCAGGGGCTaGGGGTTTATCCCGAGGGCA +
Preference number: 5 (lower is better)
Translates to: GVEGWPGFCSSRRKGWEHHKLRG*GFIPRA
Trigger: TGCCCTCGGGATAAACCCCAAGCCCCTGAGCTTGTG...GTGCTCCCACCCTTTCCTCCTGCTGCTGCAGAAACCCGGCCATCCTTCCACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp ACACGTCAGCCATGTTGTTCCTCCGAGCCTGGTGCACGGTCAGGGCAGCCCGAGGGCCCAGCATGCCAGTaGAATCTGCACGGAATCCCA +
Preference number: 5 (lower is better)
Translates to: TRQPCCSSEPGARSGQPEGPACQ*NLHGIP
Trigger: TGGGATTCCGTGCAGATTCAACTGGCATGCTGGGCC...CTCGGGCTGCCCTGACCGTGCACCAGGCTCGGAGGAACAACATGGCTGACGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567578.1
CDS GCA 90 bp TTTCCCCTGTCCTGCTGTGGCCAAAGTGTCCTTGCTCCAGGTTCCTaGCCTGGGCTTGGGCCTCCGTCTGGGCTGCTCACAAGACCTTCT +
Preference number: 5 (lower is better)
Translates to: FPLSCCGQSVLAPGS*PGLGPPSGLLTRPS
Trigger: AGAAGGTCTTGTGAGCAGCCCAGACGGAGGCCCAAGCCCAGGGCAGGAACCTGGAGCAAGGACACTTTGGCCACAGCAGGACAGGGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000568491.1
ENST00000570164.5
CDS CCA 90 bp CCTGCAGGGCCCCAAGCATCAGCCCATGTGTGGCGGCCCTTAGGATaGTCTTGGGGCCTGCCTTCTGGTTCAGAACTACCTGTACCTGGT +
Preference number: 5 (lower is better)
Translates to: PAGPQASAHVWRPLG*SWGLPSGSELPVPG
Trigger: ACCAGGTACAGGTAGTTCTGAACCAGAAGGCAGGCCCCAAGACCATCCTAAGGGCCGCCACACATGGGCTGATGCTTGGGGCCCTGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000568491.1
ENST00000570164.5
CDS CCA 90 bp GGCAGGGTCACCTGTCCACAGCGGCTCCATGCGATTGGCTGCAGTTaGGTCGAGTACCTCTCCCCTCTGAAGGTAGTGCTTCAGGACCAG +
Preference number: 5 (lower is better)
Translates to: GRVTCPQRLHAIGCS*VEYLSPLKVVLQDQ
Trigger: CTGGTCCTGAAGCACTACCTTCAGAGGGGAGAGGTACTCGACCCAACTGCAGCCAATCGCATGGAGCCGCTGTGGACAGGTGACCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000541442.5
ENST00000567673.5
ENST00000568491.1
CDS-3UTR CAA 90 bp TCCCCTGTCCTGCTGTGGCCAAAGTGTCCTTGCTCCAGGTTCCTGCCCTGGGCTGGCCCAGCATGCCAGTaGAATCTTTCACGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: SPVLLWPKCPCSRFLPWAGPACQ*NLSRAR
Trigger: CCTGGCTCGTGAAAGATTCAACTGGCATGCTGGGCC...AGCCCAGGGCAGGAACCTGGAGCAAGGACACTTTGGCCACAGCAGGACAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CAA 90 bp ACGTCAGCCATGTTGTTCCTCCGAGCCTGGTGCACGGTCAGGGCAGCCCGAGTGGCATTGCAGTCCAGTTaGCTCCCTTTCCACCAGGCA +
Preference number: 5 (lower is better)
Translates to: TSAMLFLRAWCTVRAARVALQSS*LPFHQA
Trigger: TGCCTGGTGGAAAGGGAGCAAACTGGACTGCAATGC...CACTCGGGCTGCCCTGACCGTGCACCAGGCTCGGAGGAACAACATGGCTGACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567578.1
CDS-3UTR CAA 90 bp CAGCCATGTTGTTCCTCCGAGCCTGGTGCACGGTCAGGGCAGCCCGAGTGGCCCAAAAGCCTCCACTGCTaGGCATTGCAGTCCAGTTTG +
Preference number: 5 (lower is better)
Translates to: QPCCSSEPGARSGQPEWPKSLHC*ALQSSL
Trigger: CAAACTGGACTGCAATGCCAAGCAGTGGAGGCTTTT...GGGCCACTCGGGCTGCCCTGACCGTGCACCAGGCTCGGAGGAACAACATGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567578.1
CDS-3UTR CAA 90 bp GGGCAGCCCGAGTGGCCCCACCAGCAACACTCACGATGCACTTGGCTAGGTTGCATGCACTTGGCTAGGTaGCTGGTGGAGACGGTCATG +
Preference number: 5 (lower is better)
Translates to: GQPEWPHQQHSRCTWLGCMHLAR*LVETVM
Trigger: CATGACCGTCTCCACCAGCAACCTAGCCAAGTGCAT...GCAACCTAGCCAAGTGCATCGTGAGTGTTGCTGGTGGGGCCACTCGGGCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567578.1
CDS-3UTR CAA 90 bp GACACGTCAGCCATGTTGTTCCTCCGAGCCTGGTGCACGGTCAGGGCAGCCCGAACACTCACGATGCACTaGGCTAGGTTGCTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: DTSAMLFLRAWCTVRAARTLTMH*ARLLVE
Trigger: CTCCACCAGCAACCTAGCCAAGTGCATCGTGAGTGT...TCGGGCTGCCCTGACCGTGCACCAGGCTCGGAGGAACAACATGGCTGACGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567578.1
CDS-3UTR CAA 90 bp GTCTCCGGCATAGCAAGGAGGAACGGGAGGACCTGGAGGACATCAGCGAGGACCGAGGAGGTAGGATTCTaGGTGCCCCTCAACCAGCTG +
Preference number: 5 (lower is better)
Translates to: VSGIARRNGRTWRTSARTEEVGF*VPLNQL
Trigger: CAGCTGGTTGAGGGGCACCAAGAATCCTACCTCCTC...GGTCCTCGCTGATGTCCTCCAGGTCCTCCCGTTCCTCCTTGCTATGCCGGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430477.6
CDS-3UTR CAA 90 bp TCCCCTGTCCTGCTGTGGCCAAAGTGTCCTTGCTCCAGGTTCCTGCCCTGGGCTGAGGAGGTAGGATTCTaGGTGCCCCTCAACCAGCTG +
Preference number: 5 (lower is better)
Translates to: SPVLLWPKCPCSRFLPWAEEVGF*VPLNQL
Trigger: CAGCTGGTTGAGGGGCACCAAGAATCCTACCTCCTC...AGCCCAGGGCAGGAACCTGGAGCAAGGACACTTTGGCCACAGCAGGACAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS GCA 90 bp CGGAGCTGGCCAGAAACCTGTCCACAGCGGCTCCATGCGATTGGCTaGAGTTGGGTCGAGTACCTCTCCCCTCTGAAGGTAGTGCTTCAG +
Preference number: 5 (lower is better)
Translates to: RSWPETCPQRLHAIG*SWVEYLSPLKVVLQ
Trigger: CTGAAGCACTACCTTCAGAGGGGAGAGGTACTCGACCCAACTGCAGCCAATCGCATGGAGCCGCTGTGGACAGGTTTCTGGCCAGCTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CAA 90 bp CAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGAGGACGCATTGCAGTCCAGTTaGCTCCCTTTCCACCAGGCA +
Preference number: 5 (lower is better)
Translates to: QLHRLVFSLRHSKEEREDALQSS*LPFHQA
Trigger: TGCCTGGTGGAAAGGGAGCAAACTGGACTGCAATGC...GTCCTCCCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp TTCCCCTGTCCTGCTGTGGCCAAAGTGTCCTTGCTCCAGGTTCCTGCCCTGGGCGCATTGCAGTCCAGTTaGCTCCCTTTCCACCAGGCA +
Preference number: 5 (lower is better)
Translates to: FPCPAVAKVSLLQVPALGALQSS*LPFHQA
Trigger: TGCCTGGTGGAAAGGGAGCAAACTGGACTGCAATGC...GCCCAGGGCAGGAACCTGGAGCAAGGACACTTTGGCCACAGCAGGACAGGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CAA 90 bp TCCCCTGTCCTGCTGTGGCCAAAGTGTCCTTGCTCCAGGTTCCTGCCCTGGGCTACACTCACGATGCACTaGGCTAGGTTGCTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: SPVLLWPKCPCSRFLPWATLTMH*ARLLVE
Trigger: CTCCACCAGCAACCTAGCCAAGTGCATCGTGAGTGT...AGCCCAGGGCAGGAACCTGGAGCAAGGACACTTTGGCCACAGCAGGACAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CAA 90 bp GTCAACCTCAATGCCCTGCTCATGATGGCAGTGGCCGTGTTCCTCTGGGGCTTCGACACGTCAGCCATGTaGTTCCTCCGAGCCTGGTGC +
Preference number: 5 (lower is better)
Translates to: VNLNALLMMAVAVFLWGFDTSAM*FLRAWC
Trigger: GCACCAGGCTCGGAGGAACAACATGGCTGACGTGTC...GAAGCCCCAGAGGAACACGGCCACTGCCATCATGAGCAGGGCATTGAGGTTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CAA 90 bp AGCAGGACTGCCAGGCCAGTGTCACAAGCGCTACCATCTGGGTGTAGACAGACCAGCGGCTCCATGCGATaGGCTGCAGTTGGGTCGAGT +
Preference number: 5 (lower is better)
Translates to: SRTARPVSQALPSGCRQTSGSMR*AAVGSS
Trigger: ACTCGACCCAACTGCAGCCAATCGCATGGAGCCGCT...GGTCTGTCTACACCCAGATGGTAGCGCTTGTGACACTGGCCTGGCAGTCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp TGGGTAGGGCAGGCAGTGACGAGCTGGTGTGCAAGAGACTTTAGGGCCAGGCATGCCCTTAGGATGGTCTaGGGGCCTGCCTTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: WVGQAVTSWCARDFRARHALRMV*GPAFWF
Trigger: GAACCAGAAGGCAGGCCCCAAGACCATCCTAAGGGC...ATGCCTGGCCCTAAAGTCTCTTGCACACCAGCTCGTCACTGCCTGCCCTACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS GCA 90 bp CCACCAGCAACACTCACGATGCACCTTTCCACCAGGCAAAGACGATaGGGCCCAGCATGCCAGTTGAATCTTTCACGAGCCAGGTGGCCG +
Preference number: 5 (lower is better)
Translates to: PPATLTMHLSTRQRR*GPACQLNLSRARWP
Trigger: CGGCCACCTGGCTCGTGAAAGATTCAACTGGCATGCTGGGCCGCATCGTCTTTGCCTGGTGGAAAGGTGCATCGTGAGTGTTGCTGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541442.5
CDS CCA 90 bp TGGCCAGAAACCTGTCCACAGCGGCTCCATGCGATTGGCTGCAGTTaGGTCGAGTACCTCTCCCCTCTGAAGGTAGTGCTTCAGGACCAG +
Preference number: 5 (lower is better)
Translates to: WPETCPQRLHAIGCS*VEYLSPLKVVLQDQ
Trigger: CTGGTCCTGAAGCACTACCTTCAGAGGGGAGAGGTACTCGACCCAACTGCAGCCAATCGCATGGAGCCGCTGTGGACAGGTTTCTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS CCA 90 bp TCGGGAGACAGAAGCCATGTGGCCCTCCACTCATCCACCTCTAGCTaGTGCTTCTCGGTCTTCCAGCCGGCATCCTGCAGTCCTTTCAAG +
Preference number: 5 (lower is better)
Translates to: SGDRSHVALHSSTSS*CFSVFQPASCSPFK
Trigger: CTTGAAAGGACTGCAGGATGCCGGCTGGAAGACCGAGAAGCACCAGCTAGAGGTGGATGAGTGGAGGGCCACATGGCTTCTGTCTCCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000568491.1
ENST00000570164.5
CDS CCA 90 bp AAGTGTCCTTGCTCCAGGTTCCTGCCCTGGGCTTGGGCCTCCGTCTaGGCTGCTCACAAGACCTTCTTTTCGGGAGACAGAAGCCATGTG +
Preference number: 5 (lower is better)
Translates to: KCPCSRFLPWAWASV*AAHKTFFSGDRSHV
Trigger: CACATGGCTTCTGTCTCCCGAAAAGAAGGTCTTGTGAGCAGCCCAGACGGAGGCCCAAGCCCAGGGCAGGAACCTGGAGCAAGGACACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000568491.1
ENST00000570164.5
CDS-3UTR CAA 90 bp GTGAGCAGGACTGCCAGGCCAGTGTCACAAGCGCTACCATCTGGGTGTAGACAGTCTCGTCCTTCAGGTTaGACCGTGAAGGCCCTGGAG +
Preference number: 5 (lower is better)
Translates to: VSRTARPVSQALPSGCRQSRPSG*TVKALE
Trigger: CTCCAGGGCCTTCACGGTCAAACCTGAAGGACGAGA...CTGTCTACACCCAGATGGTAGCGCTTGTGACACTGGCCTGGCAGTCCTGCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp TGGGTAGGGCAGGCAGTGACGAGCTGGTGTGCAAGAGACTTTAGGGCCAGGCATGGCCCAGCATGCCAGTaGAATCTTTCACGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: WVGQAVTSWCARDFRARHGPACQ*NLSRAR
Trigger: CCTGGCTCGTGAAAGATTCAACTGGCATGCTGGGCC...ATGCCTGGCCCTAAAGTCTCTTGCACACCAGCTCGTCACTGCCTGCCCTACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp GGCAGCCATGTAGGGTGGAGTTGGCATGAGTTAAGCCTGGGCTGGGTGTGTAGAGACACGTCAGCCATGTaGTTCCTCCGAGCCTGGTGC +
Preference number: 5 (lower is better)
Translates to: GSHVGWSWHELSLGWVCRDTSAM*FLRAWC
Trigger: GCACCAGGCTCGGAGGAACAACATGGCTGACGTGTC...TCTACACACCCAGCCCAGGCTTAACTCATGCCAACTCCACCCTACATGGCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp AGGCCAACGGCTTTAAACACAAGCTCAGGGGCTTGGGGTTTATCCCGAGGGCACTGCGATTGGCTGCAGTaGGGTCGAGTACCTCTCCCC +
Preference number: 5 (lower is better)
Translates to: RPTALNTSSGAWGLSRGHCDWLQ*GRVPLP
Trigger: GGGGAGAGGTACTCGACCCAACTGCAGCCAATCGCA...GTGCCCTCGGGATAAACCCCAAGCCCCTGAGCTTGTGTTTAAAGCCGTTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp CATGATGGCAGTGGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTGCGATTGGCTGCAGTaGGGTCGAGTACCTCTCCCC +
Preference number: 5 (lower is better)
Translates to: HDGSGRVPLGLLCLRPTACDWLQ*GRVPLP
Trigger: GGGGAGAGGTACTCGACCCAACTGCAGCCAATCGCA...CGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCCACTGCCATCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CAA 90 bp ACGGCTTTAAACACAAGCTCAGGGGCTTGGGGTTTATCCCGAGGGCACAGGGCAAGCGGCTCCATGCGATaGGCTGCAGTTGGGTCGAGT +
Preference number: 5 (lower is better)
Translates to: TALNTSSGAWGLSRGHRASGSMR*AAVGSS
Trigger: ACTCGACCCAACTGCAGCCAATCGCATGGAGCCGCT...TGCCCTGTGCCCTCGGGATAAACCCCAAGCCCCTGAGCTTGTGTTTAAAGCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp CCTCCCCAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGCGCCCACAAAAAGGTTaGGTTTTGTTGCCAAAGGGC +
Preference number: 5 (lower is better)
Translates to: PPQLHRLVFSLRHSKEERRPQKG*VLLPKG
Trigger: GCCCTTTGGCAACAAAACCAAACCTTTTTGTGGGCG...CCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTGGGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp CTCCCCAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGCGCCCACAAAAAGGTTaGGTTTTGTTGCCAAAGGGC +
Preference number: 5 (lower is better)
Translates to: LPSSTAWSSVSGIARRNGRPQKG*VLLPKG
Trigger: GCCCTTTGGCAACAAAACCAAACCTTTTTGTGGGCG...CCCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTGGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp CTCCCCAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGTCCTTGGCATGGCCTTaGGGACTCAAAACACAGGAT +
Preference number: 5 (lower is better)
Translates to: LPSSTAWSSVSGIARRNGSLAWP*GLKTQD
Trigger: ATCCTGTGTTTTGAGTCCCAAAGGCCATGCCAAGGA...CCCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS TCA 90 bp AGGCATGCCCAACCAGCCACTGAACAGCCACCCAGTGAACTGAAATaGTCCAGGCTTCACTCAGGTCCCCTCGCTTCCTCTCTCCCTCAG +
Preference number: 5 (lower is better)
Translates to: RHAQPATEQPPSELK*SRLHSGPLASSLPQ
Trigger: CTGAGGGAGAGAGGAAGCGAGGGGACCTGAGTGAAGCCTGGATCATTTCAGTTCACTGGGTGGCTGTTCAGTGGCTGGTTGGGCATGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568491.1
CDS TCA 90 bp AAGGCAGGCATGCCCAACCAGCCACTGAACAGCCACCCAGTGAACTaGAATGATCCAGGCTTCACTCAGGTCCCCTCGCTTCCTCTCTCC +
Preference number: 5 (lower is better)
Translates to: KAGMPNQPLNSHPVN*NDPGFTQVPSLPLS
Trigger: GGAGAGAGGAAGCGAGGGGACCTGAGTGAAGCCTGGATCATTTCAGTTCACTGGGTGGCTGTTCAGTGGCTGGTTGGGCATGCCTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568491.1
CDS GCA 90 bp TGGCATTGCAGTCCAGTTTGCTCCCTTTCCACCAGGCAAAGACGATaGGGCCCAGCATGCCAGTTGAATCTTTCACGAGCCAGGTGGCCG +
Preference number: 5 (lower is better)
Translates to: WHCSPVCSLSTRQRR*GPACQLNLSRARWP
Trigger: CGGCCACCTGGCTCGTGAAAGATTCAACTGGCATGCTGGGCCGCATCGTCTTTGCCTGGTGGAAAGGGAGCAAACTGGACTGCAATGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000564807.5
ENST00000566148.1
ENST00000567994.5
ENST00000570164.5
CDS GCA 90 bp GGATGTCCGCAAAAAGCCTCCACTGCTTGGCATTGCAGTCCAGTTTaGTCCCTTTCCACCAGGCAAAGACGATGCGGCCCAGCATGCCAG +
Preference number: 5 (lower is better)
Translates to: GCPQKASTAWHCSPV*SLSTRQRRCGPACQ
Trigger: CTGGCATGCTGGGCCGCATCGTCTTTGCCTGGTGGAAAGGGAGCAAACTGGACTGCAATGCCAAGCAGTGGAGGCTTTTTGCGGACATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000564807.5
ENST00000566148.1
ENST00000567578.1
ENST00000567994.5
ENST00000570164.5
CDS GCA 90 bp GGAGACAGAAGCCATGTGGCCCTCCACTCATCCACCTCTAGCTGGTaGTTCTCGGTCTTCCAGCCGGCATCCTGCAGTCCTTTCAAGAAC +
Preference number: 5 (lower is better)
Translates to: GDRSHVALHSSTSSW*FSVFQPASCSPFKN
Trigger: GTTCTTGAAAGGACTGCAGGATGCCGGCTGGAAGACCGAGAAGCACCAGCTAGAGGTGGATGAGTGGAGGGCCACATGGCTTCTGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000568491.1
ENST00000570164.5
CDS GCA 90 bp CCACCAGCAACACTCACGATGCACCTTTCCACCAGGCAAAGACGATaGGGCCCAGCATGCCAGTTGAATCTGCACGGAATCCCACAGCTG +
Preference number: 5 (lower is better)
Translates to: PPATLTMHLSTRQRR*GPACQLNLHGIPQL
Trigger: CAGCTGTGGGATTCCGTGCAGATTCAACTGGCATGCTGGGCCGCATCGTCTTTGCCTGGTGGAAAGGTGCATCGTGAGTGTTGCTGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565128.5
CDS CCA 90 bp AGCCCATGTGTGGCGGCCCTTAGGATGGTCTTGGGGCCTGCCTTCTaGTTCAGAACTACCTGTACCTGGTTTTGTGACTGGTCCCAGCAG +
Preference number: 5 (lower is better)
Translates to: SPCVAALRMVLGPAF*FRTTCTWFCDWSQQ
Trigger: CTGCTGGGACCAGTCACAAAACCAGGTACAGGTAGTTCTGAACCAGAAGGCAGGCCCCAAGACCATCCTAAGGGCCGCCACACATGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000568491.1
ENST00000570164.5
CDS-3UTR CAA 90 bp CCGTGTGGTCAACCTCAATGCCCTGCTCATGATGGCAGTGGCCGTGTTCCTCTGCTGAAACAGTGGCTTTaGCGTTCCCCACCCCTATGC +
Preference number: 5 (lower is better)
Translates to: PCGQPQCPAHDGSGRVPLLKQWL*RSPPLC
Trigger: GCATAGGGGTGGGGAACGCAAAAGCCACTGTTTCAG...CAGAGGAACACGGCCACTGCCATCATGAGCAGGGCATTGAGGTTGACCACACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CAA 90 bp TCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGAGGACCTGGAGGACATCAGCGGCATTGCAGTCCAGTTaGCTCCCTTTCCACCAGGCA +
Preference number: 5 (lower is better)
Translates to: SSVSGIARRNGRTWRTSAALQSS*LPFHQA
Trigger: TGCCTGGTGGAAAGGGAGCAAACTGGACTGCAATGC...CGCTGATGTCCTCCAGGTCCTCCCGTTCCTCCTTGCTATGCCGGAGACTGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430477.6
CDS-3UTR CAA 90 bp CCGTGTGGTCAACCTCAATGCCCTGCTCATGATGGCAGTGGCCGTGTTCCTCTGATGCACTTGGCTAGGTaGCTGGTGGAGACGGTCATG +
Preference number: 5 (lower is better)
Translates to: PCGQPQCPAHDGSGRVPLMHLAR*LVETVM
Trigger: CATGACCGTCTCCACCAGCAACCTAGCCAAGTGCAT...CAGAGGAACACGGCCACTGCCATCATGAGCAGGGCATTGAGGTTGACCACACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CAA 90 bp TGGGTAGGGCAGGCAGTGACGAGCTGGTGTGCAAGAGACTTTAGGGCCAGGCATACTTCGTGTGTCTCCTaGACGACGACCCAGCTCTCT +
Preference number: 5 (lower is better)
Translates to: WVGQAVTSWCARDFRARHTSCVS*TTTQLS
Trigger: AGAGAGCTGGGTCGTCGTCAAGGAGACACACGAAGT...ATGCCTGGCCCTAAAGTCTCTTGCACACCAGCTCGTCACTGCCTGCCCTACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp CCTCCCCAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGGGCACAATACCATCTaGAACGCCCACAAAAAGGTT +
Preference number: 5 (lower is better)
Translates to: PPQLHRLVFSLRHSKEERGHNTI*NAHKKV
Trigger: AACCTTTTTGTGGGCGTTCAAGATGGTATTGTGCCC...CCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTGGGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS GCA 90 bp TGGCATTGCAGTCCAGTTTGCTCCCTTTCCACCAGGCAAAGACGATaGGGCCCAGCATGCCAGTTGAATCTGCACGGAATCCCACAGCTG +
Preference number: 5 (lower is better)
Translates to: WHCSPVCSLSTRQRR*GPACQLNLHGIPQL
Trigger: CAGCTGTGGGATTCCGTGCAGATTCAACTGGCATGCTGGGCCGCATCGTCTTTGCCTGGTGGAAAGGGAGCAAACTGGACTGCAATGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567578.1
CDS CCA 90 bp TCTGGGCTGCTCACAAGACCTTCTTTTCGGGAGACAGAAGCCATGTaGCCCTCCACTCATCCACCTCTAGCTGGTGCTTCTCGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: SGLLTRPSFRETEAM*PSTHPPLAGASRSS
Trigger: GGAAGACCGAGAAGCACCAGCTAGAGGTGGATGAGTGGAGGGCCACATGGCTTCTGTCTCCCGAAAAGAAGGTCTTGTGAGCAGCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000568491.1
ENST00000570164.5
CDS-3UTR CAA 90 bp ACGGCTTTAAACACAAGCTCAGGGGCTTGGGGTTTATCCCGAGGGCACAGGGCACTGAAACAGTGGCTTTaGCGTTCCCCACCCCTATGC +
Preference number: 5 (lower is better)
Translates to: TALNTSSGAWGLSRGHRALKQWL*RSPPLC
Trigger: GCATAGGGGTGGGGAACGCAAAAGCCACTGTTTCAG...TGCCCTGTGCCCTCGGGATAAACCCCAAGCCCCTGAGCTTGTGTTTAAAGCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp AGGCCAACGGCTTTAAACACAAGCTCAGGGGCTTGGGGTTTATCCCGAGGGCACGCATTGCAGTCCAGTTaGCTCCCTTTCCACCAGGCA +
Preference number: 5 (lower is better)
Translates to: RPTALNTSSGAWGLSRGHALQSS*LPFHQA
Trigger: TGCCTGGTGGAAAGGGAGCAAACTGGACTGCAATGC...GTGCCCTCGGGATAAACCCCAAGCCCCTGAGCTTGTGTTTAAAGCCGTTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp CATGATGGCAGTGGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGACACTCACGATGCACTaGGCTAGGTTGCTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: HDGSGRVPLGLLCLRPTATLTMH*ARLLVE
Trigger: CTCCACCAGCAACCTAGCCAAGTGCATCGTGAGTGT...CGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCCACTGCCATCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CAA 90 bp GGGTTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCATGGCCTTTGGGACTCGACACGTCAGCCATGTaGTTCCTCCGAGCCTGGTGC +
Preference number: 5 (lower is better)
Translates to: GLVIKASQSQSLAWPLGLDTSAM*FLRAWC
Trigger: GCACCAGGCTCGGAGGAACAACATGGCTGACGTGTC...GAGTCCCAAAGGCCATGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp CGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCGACACGTCAGCCATGTaGTTCCTCCGAGCCTGGTGC +
Preference number: 5 (lower is better)
Translates to: RVPLGLLCLRPTALDTISDTSAM*FLRAWC
Trigger: GCACCAGGCTCGGAGGAACAACATGGCTGACGTGTC...GCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CAA 90 bp GTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCCACTGCGATTGGCTGCAGTaGGGTCGAGTACCTCTCCCC +
Preference number: 5 (lower is better)
Translates to: VPLGLLCLRPTALDTISHCDWLQ*GRVPLP
Trigger: GGGGAGAGGTACTCGACCCAACTGCAGCCAATCGCA...GTGGCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CAA 90 bp GTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCCACAGCGGCTCCATGCGATaGGCTGCAGTTGGGTCGAGT +
Preference number: 5 (lower is better)
Translates to: VPLGLLCLRPTALDTISHSGSMR*AAVGSS
Trigger: ACTCGACCCAACTGCAGCCAATCGCATGGAGCCGCT...GTGGCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CAA 90 bp CGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCGCCCTTAGGATGGTCTaGGGGCCTGCCTTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: RVPLGLLCLRPTALDTISALRMV*GPAFWF
Trigger: GAACCAGAAGGCAGGCCCCAAGACCATCCTAAGGGC...GCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CAA 90 bp GGTGTGGAAGGATGGCCGGGTTTCTGCAGCAGCAGGAGGAAAGGGTGGGAGCACGGGCACAATACCATCTaGAACGCCCACAAAAAGGTT +
Preference number: 5 (lower is better)
Translates to: GVEGWPGFCSSRRKGWEHGHNTI*NAHKKV
Trigger: AACCTTTTTGTGGGCGTTCAAGATGGTATTGTGCCC...GTGCTCCCACCCTTTCCTCCTGCTGCTGCAGAAACCCGGCCATCCTTCCACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp AGCCAATCCTTGGCATGGCCTTTGGGACTCAAAACACAGGATCTGACTGGTGGGTCTCGTCCTTCAGGTTaGACCGTGAAGGCCCTGGAG +
Preference number: 5 (lower is better)
Translates to: SQSLAWPLGLKTQDLTGGSRPSG*TVKALE
Trigger: CTCCAGGGCCTTCACGGTCAAACCTGAAGGACGAGA...CCCACCAGTCAGATCCTGTGTTTTGAGTCCCAAAGGCCATGCCAAGGATTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp GGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAACACTCACGATGCACTaGGCTAGGTTGCTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: GRVPLGLLCLRPTALDTITLTMH*ARLLVE
Trigger: CTCCACCAGCAACCTAGCCAAGTGCATCGTGAGTGT...TATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CAA 90 bp CGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCGAGGAGGTAGGATTCTaGGTGCCCCTCAACCAGCTG +
Preference number: 5 (lower is better)
Translates to: RVPLGLLCLRPTALDTISEEVGF*VPLNQL
Trigger: CAGCTGGTTGAGGGGCACCAAGAATCCTACCTCCTC...GCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CAA 90 bp GGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAGTGCCTGCTCTGGTTTaGTGGAATGAGCAGAGGTGG +
Preference number: 5 (lower is better)
Translates to: GRVPLGLLCLRPTALDTIVPALV*WNEQRW
Trigger: CCACCTCTGCTCATTCCACAAAACCAGAGCAGGCAC...TATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CAA 90 bp TTCCCCTGTCCTGCTGTGGCCAAAGTGTCCTTGCTCCAGGTTCCTGCCCTGGGCCTTGATGTTGATGGGTaGGTGATTAAAGCCTCCCAA +
Preference number: 5 (lower is better)
Translates to: FPCPAVAKVSLLQVPALGLDVDG*VIKASQ
Trigger: TTGGGAGGCTTTAATCACCAACCCATCAACATCAAG...GCCCAGGGCAGGAACCTGGAGCAAGGACACTTTGGCCACAGCAGGACAGGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp CAGCTCCACCGCCTGGTCTTCAGTCTCCGGCATAGCAAGGAGGAACGGGAGGACTTTAAATACATTTATTaGAACCGGCCTGGGGGAGGC +
Preference number: 5 (lower is better)
Translates to: QLHRLVFSLRHSKEEREDFKYIY*NRPGGG
Trigger: GCCTCCCCCAGGCCGGTTCAAATAAATGTATTTAAA...GTCCTCCCGTTCCTCCTTGCTATGCCGGAGACTGAAGACCAGGCGGTGGAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
CDS-3UTR CAA 90 bp CATGATGGCAGTGGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGAAAAGCCTCCACTGCTaGGCATTGCAGTCCAGTTTG +
Preference number: 5 (lower is better)
Translates to: HDGSGRVPLGLLCLRPTAKSLHC*ALQSSL
Trigger: CAAACTGGACTGCAATGCCAAGCAGTGGAGGCTTTT...CGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCCACTGCCATCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CAA 90 bp AGCAGGACTGCCAGGCCAGTGTCACAAGCGCTACCATCTGGGTGTAGACAGACCAACATGGCTACGTCATaGAGGATGTCCGCAAAAAGC +
Preference number: 5 (lower is better)
Translates to: SRTARPVSQALPSGCRQTNMATS*RMSAKS
Trigger: GCTTTTTGCGGACATCCTCAATGACGTAGCCATGTT...GGTCTGTCTACACCCAGATGGTAGCGCTTGTGACACTGGCCTGGCAGTCCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp TCTCCTGGCTGCTGTCCTTGGCTGACACGTCAGCCATGTTGTTCCTCCGAGCCTAACATGGCTACGTCATaGAGGATGTCCGCAAAAAGC +
Preference number: 5 (lower is better)
Translates to: SPGCCPWLTRQPCCSSEPNMATS*RMSAKS
Trigger: GCTTTTTGCGGACATCCTCAATGACGTAGCCATGTT...AGGCTCGGAGGAACAACATGGCTGACGTGTCAGCCAAGGACAGCAGCCAGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567578.1
CDS-3UTR CAA 90 bp CCGTGTGGTCAACCTCAATGCCCTGCTCATGATGGCAGTGGCCGTGTTCCTCTGAACATGGCTACGTCATaGAGGATGTCCGCAAAAAGC +
Preference number: 5 (lower is better)
Translates to: PCGQPQCPAHDGSGRVPLNMATS*RMSAKS
Trigger: GCTTTTTGCGGACATCCTCAATGACGTAGCCATGTT...CAGAGGAACACGGCCACTGCCATCATGAGCAGGGCATTGAGGTTGACCACACGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CAA 90 bp CAGGGCAGCCATGTAGGGTGGAGTTGGCATGAGTTAAGCCTGGGCTGGGTGTGTAACATGGCTACGTCATaGAGGATGTCCGCAAAAAGC +
Preference number: 5 (lower is better)
Translates to: QGSHVGWSWHELSLGWVCNMATS*RMSAKS
Trigger: GCTTTTTGCGGACATCCTCAATGACGTAGCCATGTT...ACACACCCAGCCCAGGCTTAACTCATGCCAACTCCACCCTACATGGCTGCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp GTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCCACATGCACTTGGCTAGGTaGCTGGTGGAGACGGTCATG +
Preference number: 5 (lower is better)
Translates to: VPLGLLCLRPTALDTISHMHLAR*LVETVM
Trigger: CATGACCGTCTCCACCAGCAACCTAGCCAAGTGCAT...GTGGCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CAA 90 bp AGCCAATCCTTGGCATGGCCTTTGGGACTCAAAACACAGGATCTGACTGGTGGGACACTCACGATGCACTaGGCTAGGTTGCTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: SQSLAWPLGLKTQDLTGGTLTMH*ARLLVE
Trigger: CTCCACCAGCAACCTAGCCAAGTGCATCGTGAGTGT...CCCACCAGTCAGATCCTGTGTTTTGAGTCCCAAAGGCCATGCCAAGGATTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp TTATTTGAACCGGCCTGGGGGAGGCTTGATGTTGATGGGTTGGTGATTAAAGCCAGCGGCTCCATGCGATaGGCTGCAGTTGGGTCGAGT +
Preference number: 5 (lower is better)
Translates to: LFEPAWGRLDVDGLVIKASGSMR*AAVGSS
Trigger: ACTCGACCCAACTGCAGCCAATCGCATGGAGCCGCT...GGCTTTAATCACCAACCCATCAACATCAAGCCTCCCCCAGGCCGGTTCAAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp CGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCACTTCGTGTGTCTCCTaGACGACGACCCAGCTCTCT +
Preference number: 5 (lower is better)
Translates to: RVPLGLLCLRPTALDTISTSCVS*TTTQLS
Trigger: AGAGAGCTGGGTCGTCGTCAAGGAGACACACGAAGT...GCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CAA 90 bp GGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATACTAAGACCAACTGCGTaGGACACCATAAGCCACAGC +
Preference number: 5 (lower is better)
Translates to: GRVPLGLLCLRPTALDTILRPTA*DTISHS
Trigger: GCTGTGGCTTATGGTGTCCAACGCAGTTGGTCTTAG...TATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CAA 90 bp AGCAGGACTGCCAGGCCAGTGTCACAAGCGCTACCATCTGGGTGTAGACAGACCGGGCACAATACCATCTaGAACGCCCACAAAAAGGTT +
Preference number: 5 (lower is better)
Translates to: SRTARPVSQALPSGCRQTGHNTI*NAHKKV
Trigger: AACCTTTTTGTGGGCGTTCAAGATGGTATTGTGCCC...GGTCTGTCTACACCCAGATGGTAGCGCTTGTGACACTGGCCTGGCAGTCCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp ACTGTGAGCAGGACTGCCAGGCCAGTGTCACAAGCGCTACCATCTGGGTGTAGATCCTTGGCATGGCCTTaGGGACTCAAAACACAGGAT +
Preference number: 5 (lower is better)
Translates to: TVSRTARPVSQALPSGCRSLAWP*GLKTQD
Trigger: ATCCTGTGTTTTGAGTCCCAAAGGCCATGCCAAGGA...TCTACACCCAGATGGTAGCGCTTGTGACACTGGCCTGGCAGTCCTGCTCACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp ACGGCTTTAAACACAAGCTCAGGGGCTTGGGGTTTATCCCGAGGGCACAGGGCAAACATGGCTACGTCATaGAGGATGTCCGCAAAAAGC +
Preference number: 5 (lower is better)
Translates to: TALNTSSGAWGLSRGHRANMATS*RMSAKS
Trigger: GCTTTTTGCGGACATCCTCAATGACGTAGCCATGTT...TGCCCTGTGCCCTCGGGATAAACCCCAAGCCCCTGAGCTTGTGTTTAAAGCCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp GTGGAGACGGTCATGGTGAAACAGATTGGGTATACAGGAGCCATAATCTCAAGGGACACGTCAGCCATGTaGTTCCTCCGAGCCTGGTGC +
Preference number: 5 (lower is better)
Translates to: VETVMVKQIGYTGAIISRDTSAM*FLRAWC
Trigger: GCACCAGGCTCGGAGGAACAACATGGCTGACGTGTC...CCTTGAGATTATGGCTCCTGTATACCCAATCTGTTTCACCATGACCGTCTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567578.1
CDS-3UTR CAA 90 bp CCGTGTGGTCAACCTCAATGCCCTGCTCATGATGGCAGTGGCCGTGTTCCTCTGGTCCTTTCAAGAACTTaGGGAACAGCATGTCCAACA +
Preference number: 5 (lower is better)
Translates to: PCGQPQCPAHDGSGRVPLVLSRT*GTACPT
Trigger: TGTTGGACATGCTGTTCCCAAAGTTCTTGAAAGGAC...CAGAGGAACACGGCCACTGCCATCATGAGCAGGGCATTGAGGTTGACCACACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CAA 90 bp AGCAGGACTGCCAGGCCAGTGTCACAAGCGCTACCATCTGGGTGTAGACAGACCGTCCTTTCAAGAACTTaGGGAACAGCATGTCCAACA +
Preference number: 5 (lower is better)
Translates to: SRTARPVSQALPSGCRQTVLSRT*GTACPT
Trigger: TGTTGGACATGCTGTTCCCAAAGTTCTTGAAAGGAC...GGTCTGTCTACACCCAGATGGTAGCGCTTGTGACACTGGCCTGGCAGTCCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp GGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATACGCCCACAAAAAGGTTaGGTTTTGTTGCCAAAGGGC +
Preference number: 5 (lower is better)
Translates to: GRVPLGLLCLRPTALDTIRPQKG*VLLPKG
Trigger: GCCCTTTGGCAACAAAACCAAACCTTTTTGTGGGCG...TATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp AGCAGGACTGCCAGGCCAGTGTCACAAGCGCTACCATCTGGGTGTAGACAGACCTTTAAATACATTTATTaGAACCGGCCTGGGGGAGGC +
Preference number: 5 (lower is better)
Translates to: SRTARPVSQALPSGCRQTFKYIY*NRPGGG
Trigger: GCCTCCCCCAGGCCGGTTCAAATAAATGTATTTAAA...GGTCTGTCTACACCCAGATGGTAGCGCTTGTGACACTGGCCTGGCAGTCCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
CDS-3UTR CAA 90 bp TTATTTGAACCGGCCTGGGGGAGGCTTGATGTTGATGGGTTGGTGATTAAAGCCCTGAAACAGTGGCTTTaGCGTTCCCCACCCCTATGC +
Preference number: 5 (lower is better)
Translates to: LFEPAWGRLDVDGLVIKALKQWL*RSPPLC
Trigger: GCATAGGGGTGGGGAACGCAAAAGCCACTGTTTCAG...GGCTTTAATCACCAACCCATCAACATCAAGCCTCCCCCAGGCCGGTTCAAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp AGGCTTGATGTTGATGGGTTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCAGGCCCAGCATGCCAGTaGAATCTTTCACGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: RLDVDGLVIKASQSQSLAGPACQ*NLSRAR
Trigger: CCTGGCTCGTGAAAGATTCAACTGGCATGCTGGGCC...TGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAACCCATCAACATCAAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp TTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCATGGCCTTTGGGACTCAAAGAGGAGGTAGGATTCTaGGTGCCCCTCAACCAGCTG +
Preference number: 5 (lower is better)
Translates to: LVIKASQSQSLAWPLGLKEEVGF*VPLNQL
Trigger: CAGCTGGTTGAGGGGCACCAAGAATCCTACCTCCTC...TTTGAGTCCCAAAGGCCATGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp GCACAATACCATCTTGAACGCCCACAAAAAGGTTTGGTTTTGTTGCCAAAGGGCGCCCTTAGGATGGTCTaGGGGCCTGCCTTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: AQYHLERPQKGLVLLPKGALRMV*GPAFWF
Trigger: GAACCAGAAGGCAGGCCCCAAGACCATCCTAAGGGC...GCCCTTTGGCAACAAAACCAAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp GATCTGACTGGTGGGCACAATACCATCTTGAACGCCCACAAAAAGGTTTGGTTTCACAAGCTCAGGGGCTaGGGGTTTATCCCGAGGGCA +
Preference number: 5 (lower is better)
Translates to: DLTGGHNTILNAHKKVWFHKLRG*GFIPRA
Trigger: TGCCCTCGGGATAAACCCCAAGCCCCTGAGCTTGTG...AAACCAAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGCCCACCAGTCAGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp AGCCAATCCTTGGCATGGCCTTTGGGACTCAAAACACAGGATCTGACTGGTGGGTCCTTGGCATGGCCTTaGGGACTCAAAACACAGGAT +
Preference number: 5 (lower is better)
Translates to: SQSLAWPLGLKTQDLTGGSLAWP*GLKTQD
Trigger: ATCCTGTGTTTTGAGTCCCAAAGGCCATGCCAAGGA...CCCACCAGTCAGATCCTGTGTTTTGAGTCCCAAAGGCCATGCCAAGGATTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp CATGATGGCAGTGGCCGTGTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGCTTGATGTTGATGGGTaGGTGATTAAAGCCTCCCAA +
Preference number: 5 (lower is better)
Translates to: HDGSGRVPLGLLCLRPTALDVDG*VIKASQ
Trigger: TTGGGAGGCTTTAATCACCAACCCATCAACATCAAG...CGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAACACGGCCACTGCCATCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp ACTGTGAGCAGGACTGCCAGGCCAGTGTCACAAGCGCTACCATCTGGGTGTAGACTTGATGTTGATGGGTaGGTGATTAAAGCCTCCCAA +
Preference number: 5 (lower is better)
Translates to: TVSRTARPVSQALPSGCRLDVDG*VIKASQ
Trigger: TTGGGAGGCTTTAATCACCAACCCATCAACATCAAG...TCTACACCCAGATGGTAGCGCTTGTGACACTGGCCTGGCAGTCCTGCTCACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp AGGCTTGATGTTGATGGGTTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCAACTTCGTGTGTCTCCTaGACGACGACCCAGCTCTCT +
Preference number: 5 (lower is better)
Translates to: RLDVDGLVIKASQSQSLATSCVS*TTTQLS
Trigger: AGAGAGCTGGGTCGTCGTCAAGGAGACACACGAAGT...TGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAACCCATCAACATCAAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp TTATTTGAACCGGCCTGGGGGAGGCTTGATGTTGATGGGTTGGTGATTAAAGCCCTAAGACCAACTGCGTaGGACACCATAAGCCACAGC +
Preference number: 5 (lower is better)
Translates to: LFEPAWGRLDVDGLVIKALRPTA*DTISHS
Trigger: GCTGTGGCTTATGGTGTCCAACGCAGTTGGTCTTAG...GGCTTTAATCACCAACCCATCAACATCAAGCCTCCCCCAGGCCGGTTCAAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp TTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCATGGCCTTTGGGACTCAAAGTGCCTGCTCTGGTTTaGTGGAATGAGCAGAGGTGG +
Preference number: 5 (lower is better)
Translates to: LVIKASQSQSLAWPLGLKVPALV*WNEQRW
Trigger: CCACCTCTGCTCATTCCACAAAACCAGAGCAGGCAC...TTTGAGTCCCAAAGGCCATGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
CDS-3UTR CAA 90 bp GTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCCACCAAAAAGGTTTGGTTTaGTTGCCAAAGGGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: VPLGLLCLRPTALDTISHQKGLV*LPKGRW
Trigger: CCACCTGCCCTTTGGCAACAAAACCAAACCTTTTTG...GTGGCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp AGCCAATCCTTGGCATGGCCTTTGGGACTCAAAACACAGGATCTGACTGGTGGGCAAAAAGGTTTGGTTTaGTTGCCAAAGGGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: SQSLAWPLGLKTQDLTGGQKGLV*LPKGRW
Trigger: CCACCTGCCCTTTGGCAACAAAACCAAACCTTTTTG...CCCACCAGTCAGATCCTGTGTTTTGAGTCCCAAAGGCCATGCCAAGGATTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp GTTCCTCTGGGGCTTCTATGCCTAAGACCAACTGCGTTGGACACCATAAGCCACGTCCTTTCAAGAACTTaGGGAACAGCATGTCCAACA +
Preference number: 5 (lower is better)
Translates to: VPLGLLCLRPTALDTISHVLSRT*GTACPT
Trigger: TGTTGGACATGCTGTTCCCAAAGTTCTTGAAAGGAC...GTGGCTTATGGTGTCCAACGCAGTTGGTCTTAGGCATAGAAGCCCCAGAGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS-3UTR CAA 90 bp GCACAATACCATCTTGAACGCCCACAAAAAGGTTTGGTTTTGTTGCCAAAGGGCGTGCCTGCTCTGGTTTaGTGGAATGAGCAGAGGTGG +
Preference number: 5 (lower is better)
Translates to: AQYHLERPQKGLVLLPKGVPALV*WNEQRW
Trigger: CCACCTCTGCTCATTCCACAAAACCAGAGCAGGCAC...GCCCTTTGGCAACAAAACCAAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327237.7
ENST00000570164.5
CDS-3UTR CAA 90 bp AGGCTTGATGTTGATGGGTTGGTGATTAAAGCCTCCCAAAGCCAATCCTTGGCAAAAAGCCTCCACTGCTaGGCATTGCAGTCCAGTTTG +
Preference number: 5 (lower is better)
Translates to: RLDVDGLVIKASQSQSLAKSLHC*ALQSSL
Trigger: CAAACTGGACTGCAATGCCAAGCAGTGGAGGCTTTT...TGCCAAGGATTGGCTTTGGGAGGCTTTAATCACCAACCCATCAACATCAAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp GCACAATACCATCTTGAACGCCCACAAAAAGGTTTGGTTTTGTTGCCAAAGGGCCTAAGACCAACTGCGTaGGACACCATAAGCCACAGC +
Preference number: 5 (lower is better)
Translates to: AQYHLERPQKGLVLLPKGLRPTA*DTISHS
Trigger: GCTGTGGCTTATGGTGTCCAACGCAGTTGGTCTTAG...GCCCTTTGGCAACAAAACCAAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp GCACAATACCATCTTGAACGCCCACAAAAAGGTTTGGTTTTGTTGCCAAAGGGCAAAAGCCTCCACTGCTaGGCATTGCAGTCCAGTTTG +
Preference number: 5 (lower is better)
Translates to: AQYHLERPQKGLVLLPKGKSLHC*ALQSSL
Trigger: CAAACTGGACTGCAATGCCAAGCAGTGGAGGCTTTT...GCCCTTTGGCAACAAAACCAAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp TTATTTGAACCGGCCTGGGGGAGGCTTGATGTTGATGGGTTGGTGATTAAAGCCGTCCTTTCAAGAACTTaGGGAACAGCATGTCCAACA +
Preference number: 5 (lower is better)
Translates to: LFEPAWGRLDVDGLVIKAVLSRT*GTACPT
Trigger: TGTTGGACATGCTGTTCCCAAAGTTCTTGAAAGGAC...GGCTTTAATCACCAACCCATCAACATCAAGCCTCCCCCAGGCCGGTTCAAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS-3UTR CAA 90 bp GCACAATACCATCTTGAACGCCCACAAAAAGGTTTGGTTTTGTTGCCAAAGGGCCAAAAAGGTTTGGTTTaGTTGCCAAAGGGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: AQYHLERPQKGLVLLPKGQKGLV*LPKGRW
Trigger: CCACCTGCCCTTTGGCAACAAAACCAAACCTTTTTG...GCCCTTTGGCAACAAAACCAAACCTTTTTGTGGGCGTTCAAGATGGTATTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000570164.5
CDS TCA 72 bp GGACCAGCCGGAGCCGGCCTTCGTTCAAGGTCTCCATaGCCAGGGCTCGGACCGCGCGGTAGTTGGCGTAGA +
Preference number: 6 (lower is better)
Translates to: GPAGAGLRSRSP*PGLGPRGSWRR
Trigger: TCTACGCCAACTACCGCGCGGTCCGAGCCCTGGTCATGGAGACCTTGAACGAAGGCCGGCTCCGGCTGGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000541442.5
ENST00000567673.5
ENST00000567994.5
ENST00000570164.5
CDS CAA 72 bp GAAGCCCCCACTTCGCCCGCATCTCGTCCTTCAGGTTaGACCGTGAAGGCCCTGGAGAGCCCCCACCAGCGC +
Preference number: 6 (lower is better)
Translates to: EAPTSPASRPSG*TVKALESPHQR
Trigger: GCGCTGGTGGGGGCTCTCCAGGGCCTTCACGGTCAAACCTGAAGGACGAGATGCGGGCGAAGTGGGGGCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000541442.5
ENST00000565128.5
ENST00000567578.1
ENST00000570164.5
CDS CCA 72 bp CGTTCCCCACCCCTATGCCCAGCAAGACTGCCTGGGTaGCTAGGGAGCCGGAGAGGCTGGAAGCAAACGCCT +
Preference number: 6 (lower is better)
Translates to: RSPPLCPARLPG*LGSRRGWKQTP
Trigger: AGGCGTTTGCTTCCAGCCTCTCCGGCTCCCTAGCCACCCAGGCAGTCTTGCTGGGCATAGGGGTGGGGAACG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000541442.5
ENST00000564807.5
ENST00000566148.1
ENST00000567994.5
ENST00000570164.5
CDS TCA 72 bp AAGCTGGGGTCAGGATGCCTAGGCAGTGGGAGAGGTTaGGACACAGGACCCGAGACCAGGGGCAGGGTCACC +
Preference number: 6 (lower is better)
Translates to: KLGSGCLGSGRG*DTGPETRGRVT
Trigger: GGTGACCCTGCCCCTGGTCTCGGGTCCTGTGTCTCAACCTCTCCCACTGCCTAGGCATCCTGACCCCAGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000541442.5
ENST00000567673.5
ENST00000568491.1
CDS TCA 72 bp CGGAATCCCACAGCTGGTAGGGCAAGTAGTCCGGGCTaGCGCTATCAGGGAAGCCCTCCCACTGCAGGCTCC +
Preference number: 6 (lower is better)
Translates to: RNPTAGRASSPG*RYQGSPPTAGS
Trigger: GGAGCCTGCAGTGGGAGGGCTTCCCTGATAGCGTCAGCCCGGACTACTTGCCCTACCAGCTGTGGGATTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567994.5
CDS CCA 72 bp GCAAGACTGCCTGGGTGGCTAGGGAGCCGGAGAGGCTaGAAGCAAACGCCTGCACGGAATCCCACAGCTGGT +
Preference number: 6 (lower is better)
Translates to: ARLPGWLGSRRG*KQTPARNPTAG
Trigger: ACCAGCTGTGGGATTCCGTGCAGGCGTTTGCTTCCAGCCTCTCCGGCTCCCTAGCCACCCAGGCAGTCTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000541442.5
ENST00000566148.1
ENST00000567994.5
ENST00000570164.5
CDS TCA 72 bp CGGAATCCCACAGCTGGTAGGGCAAGTAGTCCGGGCTaGCGCTATCAGGGAAGCCCTGAGGCAGGAACACGG +
Preference number: 6 (lower is better)
Translates to: RNPTAGRASSPG*RYQGSPEAGTR
Trigger: CCGTGTTCCTGCCTCAGGGCTTCCCTGATAGCGTCAGCCCGGACTACTTGCCCTACCAGCTGTGGGATTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000541442.5
ENST00000565128.5
ENST00000566148.1
ENST00000567578.1
ENST00000570164.5
CDS GCA 72 bp ACGGAGCTGGCCAGAAACCTGTCCACAGCGGCTCCATaGGATTGGCTGCAGTTGGGTCGAGTACCTCTCCCC +
Preference number: 6 (lower is better)
Translates to: TELARNLSTAAP*DWLQLGRVPLP
Trigger: GGGGAGAGGTACTCGACCCAACTGCAGCCAATCGCATGGAGCCGCTGTGGACAGGTTTCTGGCCAGCTCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS CCA 72 bp TTTGCGTTCCCCACCCCTATGCCCAGCAAGACTGCCTaGGTGGCTAGGGAGCCGGAGAGGCTGGAAGCAAAC +
Preference number: 6 (lower is better)
Translates to: FAFPTPMPSKTA*VAREPERLEAN
Trigger: GTTTGCTTCCAGCCTCTCCGGCTCCCTAGCCACCCAGGCAGTCTTGCTGGGCATAGGGGTGGGGAACGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000541442.5
ENST00000564807.5
ENST00000566148.1
ENST00000567994.5
ENST00000570164.5
CDS CCA 72 bp GGGCAGGGTCACCTGTCCACAGCGGCTCCATGCGATTaGCTGCAGTTGGGTCGAGTACCTCTCCCCTCTGAA +
Preference number: 6 (lower is better)
Translates to: GQGHLSTAAPCD*LQLGRVPLPSE
Trigger: TTCAGAGGGGAGAGGTACTCGACCCAACTGCAGCCAATCGCATGGAGCCGCTGTGGACAGGTGACCCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000541442.5
ENST00000567673.5
ENST00000568491.1
CDS CAA 90 bp GGGCAGGGTCACCTGTCCACAGCGGCTCCATGCGATTGGCTGCAGTaGGGTCGAGTACCTCTCCCCTCTGAAGGTAGTGCTTCAGGACCA +
Preference number: 6 (lower is better)
Translates to: GQGHLSTAAPCDWLQ*GRVPLPSEGSASGP
Trigger: TGGTCCTGAAGCACTACCTTCAGAGGGGAGAGGTACTCGACCCAACTGCAGCCAATCGCATGGAGCCGCTGTGGACAGGTGACCCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000541442.5
ENST00000567673.5
ENST00000568491.1
CDS GCA 72 bp AGCCATGTGGCCCTCCACTCATCCACCTCTAGCTGGTaGTTCTCGGTCTTCCAGCCGGCATCCTGCAGTCCT +
Preference number: 6 (lower is better)
Translates to: SHVALHSSTSSW*FSVFQPASCSP
Trigger: AGGACTGCAGGATGCCGGCTGGAAGACCGAGAAGCACCAGCTAGAGGTGGATGAGTGGAGGGCCACATGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000568491.1
ENST00000570164.5
CDS GCA 72 bp TCCCTTTCCACCAGGCAAAGACGATGCGGCCCAGCATaGCAGTTGAATCTTTCACGAGCCAGGTGGCCGTGG +
Preference number: 6 (lower is better)
Translates to: SLSTRQRRCGPA*QLNLSRARWPW
Trigger: CCACGGCCACCTGGCTCGTGAAAGATTCAACTGGCATGCTGGGCCGCATCGTCTTTGCCTGGTGGAAAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000564807.5
ENST00000566148.1
ENST00000567994.5
ENST00000570164.5
CDS GCA 72 bp CACCTTTCCACCAGGCAAAGACGATGCGGCCCAGCATaGCAGTTGAATCTTTCACGAGCCAGGTGGCCGTGG +
Preference number: 6 (lower is better)
Translates to: HLSTRQRRCGPA*QLNLSRARWPW
Trigger: CCACGGCCACCTGGCTCGTGAAAGATTCAACTGGCATGCTGGGCCGCATCGTCTTTGCCTGGTGGAAAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541442.5
CDS GCA 72 bp AGGGTCACCTGTCCACAGCGGCTCCATGCGATTGGCTaGAGTTGGGTCGAGTACCTCTCCCCTCTGAAGGTA +
Preference number: 6 (lower is better)
Translates to: RVTCPQRLHAIG*SWVEYLSPLKV
Trigger: TACCTTCAGAGGGGAGAGGTACTCGACCCAACTGCAGCCAATCGCATGGAGCCGCTGTGGACAGGTGACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000541442.5
ENST00000567673.5
ENST00000568491.1
CDS CCA 72 bp CTGGCCAGAAACCTGTCCACAGCGGCTCCATGCGATTaGCTGCAGTTGGGTCGAGTACCTCTCCCCTCTGAA +
Preference number: 6 (lower is better)
Translates to: LARNLSTAAPCD*LQLGRVPLPSE
Trigger: TTCAGAGGGGAGAGGTACTCGACCCAACTGCAGCCAATCGCATGGAGCCGCTGTGGACAGGTTTCTGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS CCA 72 bp CCCCAAGCATCAGCCCATGTGTGGCGGCCCTTAGGATaGTCTTGGGGCCTGCCTTCTGGTTCAGAACTACCT +
Preference number: 6 (lower is better)
Translates to: PQASAHVWRPLG*SWGLPSGSELP
Trigger: AGGTAGTTCTGAACCAGAAGGCAGGCCCCAAGACCATCCTAAGGGCCGCCACACATGGGCTGATGCTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000568491.1
ENST00000570164.5
CDS CCA 72 bp AGAAGCCATGTGGCCCTCCACTCATCCACCTCTAGCTaGTGCTTCTCGGTCTTCCAGCCGGCATCCTGCAGT +
Preference number: 6 (lower is better)
Translates to: RSHVALHSSTSS*CFSVFQPASCS
Trigger: ACTGCAGGATGCCGGCTGGAAGACCGAGAAGCACCAGCTAGAGGTGGATGAGTGGAGGGCCACATGGCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000568491.1
ENST00000570164.5
CDS CAA 72 bp CACCTGTCCACAGCGGCTCCATGCGATTGGCTGCAGTaGGGTCGAGTACCTCTCCCCTCTGAAGGTAGTGCT +
Preference number: 6 (lower is better)
Translates to: HLSTAAPCDWLQ*GRVPLPSEGSA
Trigger: AGCACTACCTTCAGAGGGGAGAGGTACTCGACCCAACTGCAGCCAATCGCATGGAGCCGCTGTGGACAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000541442.5
ENST00000567673.5
ENST00000568491.1
CDS CAA 90 bp AATCTTTCACGAGCCAGGTGGCCGTGGCAGCTGAAACAGTGGCTTTaGCGTTCCCCACCCCTATGCCCAGCAAGACTGCCTGGGTGGCTA +
Preference number: 6 (lower is better)
Translates to: NLSRARWPWQLKQWL*RSPPLCPARLPGWL
Trigger: TAGCCACCCAGGCAGTCTTGCTGGGCATAGGGGTGGGGAACGCAAAAGCCACTGTTTCAGCTGCCACGGCCACCTGGCTCGTGAAAGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000541442.5
ENST00000564807.5
ENST00000566148.1
ENST00000567994.5
ENST00000570164.5
CDS CAA 90 bp CTGGCCAGAAACCTGTCCACAGCGGCTCCATGCGATTGGCTGCAGTaGGGTCGAGTACCTCTCCCCTCTGAAGGTAGTGCTTCAGGACCA +
Preference number: 6 (lower is better)
Translates to: LARNLSTAAPCDWLQ*GRVPLPSEGSASGP
Trigger: TGGTCCTGAAGCACTACCTTCAGAGGGGAGAGGTACTCGACCCAACTGCAGCCAATCGCATGGAGCCGCTGTGGACAGGTTTCTGGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS TCA 72 bp CACACCCACACCAACCCCATGTCTGTTCAGCAGCAATaGAGAACCCAGGACAGAGAGGTGGGGCCTTGCCAG +
Preference number: 6 (lower is better)
Translates to: HTHTNPMSVQQQ*RTQDREVGPCQ
Trigger: CTGGCAAGGCCCCACCTCTCTGTCCTGGGTTCTTCATTGCTGCTGAACAGACATGGGGTTGGTGTGGGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567673.5
ENST00000568491.1
CDS GCA 72 bp CCAGAAACCTGTCCACAGCGGCTCCATGCGATTGGCTaGAGTTGGGTCGAGTACCTCTCCCCTCTGAAGGTA +
Preference number: 6 (lower is better)
Translates to: PETCPQRLHAIG*SWVEYLSPLKV
Trigger: TACCTTCAGAGGGGAGAGGTACTCGACCCAACTGCAGCCAATCGCATGGAGCCGCTGTGGACAGGTTTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS CCA 72 bp GGCCCAGCATGCCAGTTGAATCTTTCACGAGCCAGGTaGCCGTGGCAGCTGAAACAGTGGCTTTTGCGTTCC +
Preference number: 6 (lower is better)
Translates to: GPACQLNLSRAR*PWQLKQWLLRS
Trigger: GGAACGCAAAAGCCACTGTTTCAGCTGCCACGGCCACCTGGCTCGTGAAAGATTCAACTGGCATGCTGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000541442.5
ENST00000564807.5
ENST00000566148.1
ENST00000567994.5
ENST00000570164.5
CDS CCA 72 bp ACCTGTCCACAGCGGCTCCATGCGATTGGCTGCAGTTaGGTCGAGTACCTCTCCCCTCTGAAGGTAGTGCTT +
Preference number: 6 (lower is better)
Translates to: TCPQRLHAIGCS*VEYLSPLKVVL
Trigger: AAGCACTACCTTCAGAGGGGAGAGGTACTCGACCCAACTGCAGCCAATCGCATGGAGCCGCTGTGGACAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000541442.5
ENST00000567673.5
ENST00000567994.5
ENST00000568491.1
ENST00000570164.5
CDS CAA 72 bp AACCTGTCCACAGCGGCTCCATGCGATTGGCTGCAGTaGGGTCGAGTACCTCTCCCCTCTGAAGGTAGTGCT +
Preference number: 6 (lower is better)
Translates to: NLSTAAPCDWLQ*GRVPLPSEGSA
Trigger: AGCACTACCTTCAGAGGGGAGAGGTACTCGACCCAACTGCAGCCAATCGCATGGAGCCGCTGTGGACAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000570164.5
CDS CAA 72 bp AGCATCAGCCCATGTGTGGCGGCCCTTAGGATGGTCTaGGGGCCTGCCTTCTGGTTCAGAACTACCTGTACC +
Preference number: 6 (lower is better)
Translates to: SISPCVAALRMV*GPAFWFRTTCT
Trigger: GGTACAGGTAGTTCTGAACCAGAAGGCAGGCCCCAAGACCATCCTAAGGGCCGCCACACATGGGCTGATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000568491.1
ENST00000570164.5
CDS CAA 72 bp AGATGGGTGCCCCCACAGGCAGCTACCTTGGCTAGGTaGCTGGTGGAGACGGTCATGGTGAAACAGATTGGG +
Preference number: 6 (lower is better)
Translates to: RWVPPQAATLAR*LVETVMVKQIG
Trigger: CCCAATCTGTTTCACCATGACCGTCTCCACCAGCAACCTAGCCAAGGTAGCTGCCTGTGGGGGCACCCATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566148.1
CDS CAA 90 bp AAGGCAGGTGTTTTAGGCAGATGGGTGCCCCCACAGGCAGCTACCTaGGCTAGGTTGCTGGTGGAGACGGTCATGGTGAAACAGATTGGG +
Preference number: 6 (lower is better)
Translates to: KAGVLGRWVPPQAAT*ARLLVETVMVKQIG
Trigger: CCCAATCTGTTTCACCATGACCGTCTCCACCAGCAACCTAGCCAAGGTAGCTGCCTGTGGGGGCACCCATCTGCCTAAAACACCTGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566148.1
CDS GCA 72 bp AGTCCAGTTTGCTCCCTTTCCACCAGGCAAAGACGATaGGGCCCAGCATGCCAGTTGAATCTTTCACGAGCC +
Preference number: 6 (lower is better)
Translates to: SPVCSLSTRQRR*GPACQLNLSRA
Trigger: GGCTCGTGAAAGATTCAACTGGCATGCTGGGCCGCATCGTCTTTGCCTGGTGGAAAGGGAGCAAACTGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000564807.5
ENST00000566148.1
ENST00000567994.5
ENST00000570164.5
CDS GCA 72 bp ACACTCACGATGCACCTTTCCACCAGGCAAAGACGATaGGGCCCAGCATGCCAGTTGAATCTTTCACGAGCC +
Preference number: 6 (lower is better)
Translates to: TLTMHLSTRQRR*GPACQLNLSRA
Trigger: GGCTCGTGAAAGATTCAACTGGCATGCTGGGCCGCATCGTCTTTGCCTGGTGGAAAGGTGCATCGTGAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541442.5
CDS GCA 72 bp ACACTCACGATGCACCTTTCCACCAGGCAAAGACGATaGGGCCCAGCATGCCAGTTGAATCTGCACGGAATC +
Preference number: 6 (lower is better)
Translates to: TLTMHLSTRQRR*GPACQLNLHGI
Trigger: GATTCCGTGCAGATTCAACTGGCATGCTGGGCCGCATCGTCTTTGCCTGGTGGAAAGGTGCATCGTGAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565128.5
CDS GCA 72 bp AGTCCAGTTTGCTCCCTTTCCACCAGGCAAAGACGATaGGGCCCAGCATGCCAGTTGAATCTGCACGGAATC +
Preference number: 6 (lower is better)
Translates to: SPVCSLSTRQRR*GPACQLNLHGI
Trigger: GATTCCGTGCAGATTCAACTGGCATGCTGGGCCGCATCGTCTTTGCCTGGTGGAAAGGGAGCAAACTGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567578.1
CDS CCA 72 bp AACTCACACACTACCAAGGCAGGTGTTTTAGGCAGATaGGTGCCCCCACAGGCAGCTACCTTGGCTAGGTTG +
Preference number: 6 (lower is better)
Translates to: NSHTTKAGVLGR*VPPQAATLARL
Trigger: CAACCTAGCCAAGGTAGCTGCCTGTGGGGGCACCCATCTGCCTAAAACACCTGCCTTGGTAGTGTGTGAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566148.1
CDS CAA 90 bp TTCAAGAACTTTGGGAACAGCATGTCCAACACTTCGTGTGTCTCCTaGACGACGACCCAGCTCTCTTTCTTAGGACCTGCCCGCACCCGG +
Preference number: 6 (lower is better)
Translates to: FKNFGNSMSNTSCVS*TTTQLSFLGPARTR
Trigger: CCGGGTGCGGGCAGGTCCTAAGAAAGAGAGCTGGGTCGTCGTCAAGGAGACACACGAAGTGTTGGACATGCTGTTCCCAAAGTTCTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000568491.1
ENST00000570164.5
CDS CAA 90 bp GTTTTAGGCAGATGGGTGCCCCCACAGGCAGCTACCTTGGCTAGGTaGCTGGTGGAGACGGTCATGGTGAAACAGATTGGGTATACAGGA +
Preference number: 6 (lower is better)
Translates to: VLGRWVPPQAATLAR*LVETVMVKQIGYTG
Trigger: TCCTGTATACCCAATCTGTTTCACCATGACCGTCTCCACCAGCAACCTAGCCAAGGTAGCTGCCTGTGGGGGCACCCATCTGCCTAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566148.1
CDS CAA 72 bp TTGAGGATGTCCGCAAAAAGCCTCCACTGCTTGGCATaGCAGTCCAGTTTGCTCCCTTTCCACCAGGCAAAG +
Preference number: 6 (lower is better)
Translates to: LRMSAKSLHCLA*QSSLLPFHQAK
Trigger: CTTTGCCTGGTGGAAAGGGAGCAAACTGGACTGCAATGCCAAGCAGTGGAGGCTTTTTGCGGACATCCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000564807.5
ENST00000566148.1
ENST00000567578.1
ENST00000567994.5
ENST00000570164.5
CDS CAA 72 bp TTTGGGAACAGCATGTCCAACACTTCGTGTGTCTCCTaGACGACGACCCAGCTCTCTTTCTTAGGACCTGCC +
Preference number: 6 (lower is better)
Translates to: FGNSMSNTSCVS*TTTQLSFLGPA
Trigger: GGCAGGTCCTAAGAAAGAGAGCTGGGTCGTCGTCAAGGAGACACACGAAGTGTTGGACATGCTGTTCCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000567994.5
ENST00000568491.1
ENST00000570164.5
CDS CAA 72 bp ACAGGAGCCATAATCTCAAGGAACATGGCTACGTCATaGAGGATGTCCGCAAAAAGCCTCCACTGCTTGGCA +
Preference number: 6 (lower is better)
Translates to: TGAIISRNMATS*RMSAKSLHCLA
Trigger: TGCCAAGCAGTGGAGGCTTTTTGCGGACATCCTCAATGACGTAGCCATGTTCCTTGAGATTATGGCTCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000564807.5
ENST00000566148.1
ENST00000567578.1
ENST00000567994.5
ENST00000570164.5
CDS CAA 90 bp ATTGGGTATACAGGAGCCATAATCTCAAGGAACATGGCTACGTCATaGAGGATGTCCGCAAAAAGCCTCCACTGCTTGGCATTGCAGTCC +
Preference number: 6 (lower is better)
Translates to: IGYTGAIISRNMATS*RMSAKSLHCLALQS
Trigger: GGACTGCAATGCCAAGCAGTGGAGGCTTTTTGCGGACATCCTCAATGACGTAGCCATGTTCCTTGAGATTATGGCTCCTGTATACCCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000327237.7
ENST00000430477.6
ENST00000564807.5
ENST00000566148.1
ENST00000567578.1
ENST00000567994.5
ENST00000570164.5