RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RUNX2 (Homo sapiens)

Ensembl gene IDs: ENSG00000124813

Ensembl transcript IDs: ENST00000359524.7, ENST00000371432.7, ENST00000371436.10, ENST00000371438.5, ENST00000473041.1, ENST00000478660.6, ENST00000483243.5, ENST00000483377.5, ENST00000576263.5, ENST00000625924.1, ENST00000646519.1, ENST00000647337.2

Found 1397 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGTGGCCGTTCATGGTCCGCAGCTCCACCAGGATGTCCCCGACGTaGGCCTCCAAGCTCGCCGCAGCGGCGGGCCGGGCTCGGGGCGGC +
Preference number: 1 (lower is better)
Translates to: RWPFMVRSSTRMSPT*ASKLAAAAGRARGG
Trigger: GCCGCCCCGAGCCCGGCCCGCCGCTGCGGCGAGCTTGGAGGCCCACGTCGGGGACATCCTGGTGGAGCTGCGGACCATGAACGGCCACCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478660.6
3UTR GCA 90 bp CCGGTGCCAGGACGGGCGGCGGCCGCTCCTTGTCATCCCCGCGTGTaGTGGGAGAGATGGTCGAAGGGCAACCGGGGAGCCAGTCGACCA +
Preference number: 1 (lower is better)
Translates to: PVPGRAAAAPCHPRV*WERWSKGNRGASRP
Trigger: TGGTCGACTGGCTCCCCGGTTGCCCTTCGACCATCTCTCCCAGCACACGCGGGGATGACAAGGAGCGGCCGCCGCCCGTCCTGGCACCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478660.6
3UTR CCA 90 bp CAGCTGCGCAGAGCAACCGCTCCTCCGCTGGGCGCGCTTCGCTGCTaGGGAGGGACAGGCAGGGATGCCTGGTGCAAGCGATCCCTCGGC +
Preference number: 1 (lower is better)
Translates to: QLRRATAPPLGALRC*GGTGRDAWCKRSLG
Trigger: GCCGAGGGATCGCTTGCACCAGGCATCCCTGCCTGTCCCTCCCCAGCAGCGAAGCGCGCCCAGCGGAGGAGCGGTTGCTCTGCGCAGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
3UTR GCA 90 bp AGGCAGCTGCGCAGAGCAACCGCTCCTCCGCTGGGCGCGCTTCGCTaGTGGGGAGGGACAGGCAGGGATGCCTGGTGCAAGCGATCCCTC +
Preference number: 1 (lower is better)
Translates to: RQLRRATAPPLGALR*WGGTGRDAWCKRSL
Trigger: GAGGGATCGCTTGCACCAGGCATCCCTGCCTGTCCCTCCCCAGCAGCGAAGCGCGCCCAGCGGAGGAGCGGTTGCTCTGCGCAGCTGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
3UTR CCA 90 bp GTGCCAGGACGGGCGGCGGCCGCTCCTTGTCATCCCCGCGTGTGCTaGGAGAGATGGTCGAAGGGCAACCGGGGAGCCAGTCGACCAGAC +
Preference number: 1 (lower is better)
Translates to: VPGRAAAAPCHPRVC*ERWSKGNRGASRPD
Trigger: GTCTGGTCGACTGGCTCCCCGGTTGCCCTTCGACCATCTCTCCCAGCACACGCGGGGATGACAAGGAGCGGCCGCCGCCCGTCCTGGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478660.6
3UTR CCA 90 bp CCGTGCTTTCCGCTAGGCAGCTGCGCAGAGCAACCGCTCCTCCGCTaGGCGCGCTTCGCTGCTGGGGAGGGACAGGCAGGGATGCCTGGT +
Preference number: 1 (lower is better)
Translates to: PCFPLGSCAEQPLLR*ARFAAGEGQAGMPG
Trigger: ACCAGGCATCCCTGCCTGTCCCTCCCCAGCAGCGAAGCGCGCCCAGCGGAGGAGCGGTTGCTCTGCGCAGCTGCCTAGCGGAAAGCACGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
3UTR GCA 90 bp CTGTTTCACGCTGAAACGCTAGGGCCGTGCTTTCCGCTAGGCAGCTaGGCAGAGCAACCGCTCCTCCGCTGGGCGCGCTTCGCTGCTGGG +
Preference number: 1 (lower is better)
Translates to: LFHAETLGPCFPLGS*AEQPLLRWARFAAG
Trigger: CCCAGCAGCGAAGCGCGCCCAGCGGAGGAGCGGTTGCTCTGCGCAGCTGCCTAGCGGAAAGCACGGCCCTAGCGTTTCAGCGTGAAACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576263.5
3UTR CCA 90 bp AGGGACGAAGCCAGTTTGGTGAGGGCCCGCGCTATGCTGTCCAGGTaGCCGTTCATGGTCCGCAGCTCCACCAGGATGTCCCCGACGTGG +
Preference number: 1 (lower is better)
Translates to: RDEASLVRARAMLSR*PFMVRSSTRMSPTW
Trigger: CCACGTCGGGGACATCCTGGTGGAGCTGCGGACCATGAACGGCCACCTGGACAGCATAGCGCGGGCCCTCACCAAACTGGCTTCGTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478660.6
3UTR GCA 90 bp TGTGAGGCGCAACCGGGTCTGTTTCACGCTGAAACGCTAGGGCCGTaGTTTCCGCTAGGCAGCTGCGCAGAGCAACCGCTCCTCCGCTGG +
Preference number: 1 (lower is better)
Translates to: CEAQPGLFHAETLGP*FPLGSCAEQPLLRW
Trigger: CCAGCGGAGGAGCGGTTGCTCTGCGCAGCTGCCTAGCGGAAAGCACGGCCCTAGCGTTTCAGCGTGAAACAGACCCGGTTGCGCCTCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576263.5
3UTR CCA 90 bp GGGCGGCGGTGGAGGGGCCTGGCTCCTCCGAGGAGAGGAACAAGGTaGTCGAAGACTGGGAGTCCAAGGTACTGGGCTCTGAATCCCCAT +
Preference number: 1 (lower is better)
Translates to: GRRWRGLAPPRRGTR*SKTGSPRYWALNPH
Trigger: ATGGGGATTCAGAGCCCAGTACCTTGGACTCCCAGTCTTCGACCACCTTGTTCCTCTCCTCGGAGGAGCCAGGCCCCTCCACCGCCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478660.6
3UTR CCA 90 bp GAGGGGCCTGGCTCCTCCGAGGAGAGGAACAAGGTGGTCGAAGACTaGGAGTCCAAGGTACTGGGCTCTGAATCCCCATGGGAGTCCATC +
Preference number: 1 (lower is better)
Translates to: EGPGSSEERNKVVED*ESKVLGSESPWESI
Trigger: GATGGACTCCCATGGGGATTCAGAGCCCAGTACCTTGGACTCCCAGTCTTCGACCACCTTGTTCCTCTCCTCGGAGGAGCCAGGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478660.6
3UTR TCA 90 bp AGCTCCTCTCCCTCCACGCCACGCGGAAGTCGCAGGAATGGGATGTaGAAGAGTGTTTCTCTAAGCATCCTTCGCAGGGTGCCACCGCCG +
Preference number: 1 (lower is better)
Translates to: SSSPSTPRGSRRNGM*KSVSLSILRRVPPP
Trigger: CGGCGGTGGCACCCTGCGAAGGATGCTTAGAGAAACACTCTTTCACATCCCATTCCTGCGACTTCCGCGTGGCGTGGAGGGAGAGGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576263.5
3UTR GCA 90 bp ACTCCCAGGCAGGAAGCACAGGTCCAGCTGCCCCACACGCTGTCCTaGAATGCTGGGTGGCCTACAAAGGTGGGTTTGAGAAGGACCAGA +
Preference number: 1 (lower is better)
Translates to: TPRQEAQVQLPHTLS*NAGWPTKVGLRRTR
Trigger: TCTGGTCCTTCTCAAACCCACCTTTGTAGGCCACCCAGCATTGCAGGACAGCGTGTGGGGCAGCTGGACCTGTGCTTCCTGCCTGGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR TCA 90 bp GTGAGCTGTCTGCGGAGGGCACTGGTCCATACACAGCTGCCACCGTaGGGGTGTGAAGTTTCAAAGCACAGAGAGGAAGCGGCTTTGCTC +
Preference number: 1 (lower is better)
Translates to: VSCLRRALVHTQLPP*GCEVSKHREEAALL
Trigger: GAGCAAAGCCGCTTCCTCTCTGTGCTTTGAAACTTCACACCCTCACGGTGGCAGCTGTGTATGGACCAGTGCCCTCCGCAGACAGCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR CCA 90 bp CCTGGGGTCTGTAATCTGACTCTGTCCTTGTGGATTAAAAGGACTTaGTGCAGAGTTCAGGGAGGGCCGTGGGTTCTGAGGCGGGACACC +
Preference number: 1 (lower is better)
Translates to: PGVCNLTLSLWIKRT*CRVQGGPWVLRRDT
Trigger: GGTGTCCCGCCTCAGAACCCACGGCCCTCCCTGAACTCTGCACCAAGTCCTTTTAATCCACAAGGACAGAGTCAGATTACAGACCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483377.5
3UTR CCA 90 bp TGCTTTGAGCTCCTCTCCCTCCACGCCACGCGGAAGTCGCAGGAATaGGATGTGAAAGAGTGTTTCTCTAAGCATCCTTCGCAGGGTGCC +
Preference number: 1 (lower is better)
Translates to: CFELLSLHATRKSQE*DVKECFSKHPSQGA
Trigger: GGCACCCTGCGAAGGATGCTTAGAGAAACACTCTTTCACATCCCATTCCTGCGACTTCCGCGTGGCGTGGAGGGAGAGGAGCTCAAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576263.5
3UTR GCA 90 bp GGGGTCTGTAATCTGACTCTGTCCTTGTGGATTAAAAGGACTTGGTaGAGAGTTCAGGGAGGGCCGTGGGTTCTGAGGCGGGACACCTAC +
Preference number: 1 (lower is better)
Translates to: GVCNLTLSLWIKRTW*RVQGGPWVLRRDTY
Trigger: GTAGGTGTCCCGCCTCAGAACCCACGGCCCTCCCTGAACTCTGCACCAAGTCCTTTTAATCCACAAGGACAGAGTCAGATTACAGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483377.5
3UTR CCA 90 bp GATAGGATCCTGACGAAGTGCCATAGTAGAGATATGGAGTGCTGCTaGTCTGGAAGGGTCCACTCTGGCTTTGGGAAGAGCCGGGGTAGG +
Preference number: 1 (lower is better)
Translates to: DRILTKCHSRDMECC*SGRVHSGFGKSRGR
Trigger: CCTACCCCGGCTCTTCCCAAAGCCAGAGTGGACCCTTCCAGACCAGCAGCACTCCATATCTCTACTATGGCACTTCGTCAGGATCCTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483377.5
ENST00000646519.1
3UTR TCA 90 bp GGCAAATCTCTGCTAAATTCTGCTTGGGTGGGTGGAGGATTCCAATaGAGGGACCCTGACTTTTCGGGGAGGAGAGCAGGGATTGGCCTG +
Preference number: 1 (lower is better)
Translates to: GKSLLNSAWVGGGFQ*RDPDFSGRRAGIGL
Trigger: CAGGCCAATCCCTGCTCTCCTCCCCGAAAAGTCAGGGTCCCTTCATTGGAATCCTCCACCCACCCAAGCAGAATTTAGCAGAGATTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR GCA 90 bp ACTGATAGGATCCTGACGAAGTGCCATAGTAGAGATATGGAGTGCTaGTGGTCTGGAAGGGTCCACTCTGGCTTTGGGAAGAGCCGGGGT +
Preference number: 1 (lower is better)
Translates to: TDRILTKCHSRDMEC*WSGRVHSGFGKSRG
Trigger: ACCCCGGCTCTTCCCAAAGCCAGAGTGGACCCTTCCAGACCAGCAGCACTCCATATCTCTACTATGGCACTTCGTCAGGATCCTATCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483377.5
ENST00000646519.1
3UTR TCA 90 bp ATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAACTGGTTTTGTaGGCTGTCTGCGGAGGGCACTGGTCCATACACAGCTGCCACCGT +
Preference number: 1 (lower is better)
Translates to: IHSTSCPFSAPQLVL*AVCGGHWSIHSCHR
Trigger: ACGGTGGCAGCTGTGTATGGACCAGTGCCCTCCGCAGACAGCTCACAAAACCAGTTGAGGTGCACTAAAGGGACATGAGGTAGAATGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR GCA 90 bp GAAACTGATAGGATCCTGACGAAGTGCCATAGTAGAGATATGGAGTaGTGCTGGTCTGGAAGGGTCCACTCTGGCTTTGGGAAGAGCCGG +
Preference number: 1 (lower is better)
Translates to: ETDRILTKCHSRDME*CWSGRVHSGFGKSR
Trigger: CCGGCTCTTCCCAAAGCCAGAGTGGACCCTTCCAGACCAGCAGCACTCCATATCTCTACTATGGCACTTCGTCAGGATCCTATCAGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483377.5
ENST00000646519.1
3UTR GCA 90 bp AAGTCAGAGGTGGCAGTGTCATCATCCCCATGGGAGTCCATCTGCTaGAGAAAATGTGAGGCACTAGGACCAGAGAGCCCTTTCCTGCTA +
Preference number: 1 (lower is better)
Translates to: KSEVAVSSSPWESIC*RKCEALGPESPFLL
Trigger: TAGCAGGAAAGGGCTCTCTGGTCCTAGTGCCTCACATTTTCTGCAGCAGATGGACTCCCATGGGGATGATGACACTGCCACCTCTGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646519.1
3UTR CCA 90 bp TCCTTGTGGATTAAAAGGACTTGGTGCAGAGTTCAGGGAGGGCCGTaGGTTCTGAGGCGGGACACCTACTCTCATACTGGGATGAGGAAT +
Preference number: 1 (lower is better)
Translates to: SLWIKRTWCRVQGGP*VLRRDTYSHTGMRN
Trigger: ATTCCTCATCCCAGTATGAGAGTAGGTGTCCCGCCTCAGAACCCACGGCCCTCCCTGAACTCTGCACCAAGTCCTTTTAATCCACAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483377.5
3UTR TCA 90 bp GGCAGTGTCATCATCCCCATGGGAGTCCATCTGCTGCAGAAAATGTaGGGCACTAGGACCAGAGAGCCCTTTCCTGCTATTTGCTTGAGA +
Preference number: 1 (lower is better)
Translates to: GSVIIPMGVHLLQKM*GTRTREPFPAICLR
Trigger: TCTCAAGCAAATAGCAGGAAAGGGCTCTCTGGTCCTAGTGCCTCACATTTTCTGCAGCAGATGGACTCCCATGGGGATGATGACACTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646519.1
3UTR TCA 90 bp TTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTaGGGAATTTCAATATGGTCGCCAAACAGATTCATCCATTCTGCC +
Preference number: 1 (lower is better)
Translates to: LIRVGCGPQIPLGHC*GISIWSPNRFIHSA
Trigger: GGCAGAATGGATGAATCTGTTTGGCGACCATATTGAAATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646519.1
3UTR GCA 90 bp AGGACCTACTCCCAAAGGACAGTGATGTCATTCTGCTCCTCTAAATaGAAATTCTGTGGAAAGCTGCCAGTGGGGCCTTGGGTAAGGCAG +
Preference number: 1 (lower is better)
Translates to: RTYSQRTVMSFCSSK*KFCGKLPVGPWVRQ
Trigger: CTGCCTTACCCAAGGCCCCACTGGCAGCTTTCCACAGAATTTGCATTTAGAGGAGCAGAATGACATCACTGTCCTTTGGGAGTAGGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR CCA 90 bp ATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAACTaGTTTTGTGAGCTGTCTGCGGAGGGCACTGGTCCATACACAGCT +
Preference number: 1 (lower is better)
Translates to: MEASILPHVPLVHLN*FCELSAEGTGPYTA
Trigger: AGCTGTGTATGGACCAGTGCCCTCCGCAGACAGCTCACAAAACCAGTTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR CCA 90 bp CAAATTCTGTGGAAAGCTGCCAGTGGGGCCTTGGGTAAGGCAGATTaGGGTTCCCCTGTTGTGTTGTTTGGTAAGGCTGGTTGGTTAAGA +
Preference number: 1 (lower is better)
Translates to: QILWKAASGALGKAD*GSPVVLFGKAGWLR
Trigger: TCTTAACCAACCAGCCTTACCAAACAACACAACAGGGGAACCCCAATCTGCCTTACCCAAGGCCCCACTGGCAGCTTTCCACAGAATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR TCA 90 bp CTTTTCGGGGAGGAGAGCAGGGATTGGCCTGGTGGTGTCATTAGATaGTCCTTGTTTGGATTAAGGATTTGCACTTGGAAATCTGCCATG +
Preference number: 1 (lower is better)
Translates to: LFGEESRDWPGGVIR*SLFGLRICTWKSAM
Trigger: CATGGCAGATTTCCAAGTGCAAATCCTTAATCCAAACAAGGATCATCTAATGACACCACCAGGCCAATCCCTGCTCTCCTCCCCGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR TCA 90 bp ACCTGCAGCATGTCTGAAAGCAGAAATTGGAAGAGTTATTCTGAATaGTGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTT +
Preference number: 1 (lower is better)
Translates to: TCSMSESRNWKSYSE*WYCDGSIHSTSCPF
Trigger: AAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCATCATTCAGAATAACTCTTCCAATTTCTGCTTTCAGACATGCTGCAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR GCA 90 bp AATTCCCAGGAACTAGTACATGGTTCCACAGTAGTAGTAAGACTTTaGTTTGGTCTTGAAATCACAAATCAAACACATGACCCAGTGCAA +
Preference number: 1 (lower is better)
Translates to: NSQELVHGSTVVVRL*FGLEITNQTHDPVQ
Trigger: TTGCACTGGGTCATGTGTTTGATTTGTGATTTCAAGACCAAAGCAAAGTCTTACTACTACTGTGGAACCATGTACTAGTTCCTGGGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR CCA 90 bp ATAATTATTACTTTTGCTAATGCTTCGTGTTTCCATGTATTAACCTaGATTCTGGGCCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTA +
Preference number: 1 (lower is better)
Translates to: IIITFANASCFHVLT*ILGQSLSSELRESL
Trigger: TAAGGATTCCCTCAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGCAAAAGTAATAATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp GGCGGCGGGGATGTACCCGCGTCCACGGTGCCCTCCTCCCTGCCCGCAGTGCTGGGCGGTGGAGGGGCCTaGCTCCTCCGAGGAGAGGAA +
Preference number: 2 (lower is better)
Translates to: GGGDVPASTVPSSLPAVLGGGGA*LLRGEE
Trigger: TTCCTCTCCTCGGAGGAGCCAGGCCCCTCCACCGCC...CAGCACTGCGGGCAGGGAGGAGGGCACCGTGGACGCGGGTACATCCCCGCCGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478660.6
3UTR-3UTR GCA 90 bp TCGGGGCGGCGGGGATGTACCCGCGTCCACGGTGCCCTCCTCCCTGCCCGCAGTTGTCATCCCCGCGTGTaGTGGGAGAGATGGTCGAAG +
Preference number: 2 (lower is better)
Translates to: SGRRGCTRVHGALLPARSCHPRV*WERWSK
Trigger: CTTCGACCATCTCTCCCAGCACACGCGGGGATGACA...ACTGCGGGCAGGGAGGAGGGCACCGTGGACGCGGGTACATCCCCGCCGCCCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000478660.6
3UTR-3UTR CCA 90 bp GGCGGCGGGGATGTACCCGCGTCCACGGTGCCCTCCTCCCTGCCCGCAGTGCTGCCGCAAGCCTGCTGGTaGAGCTTCAGCTTGTCAGTG +
Preference number: 2 (lower is better)
Translates to: GGGDVPASTVPSSLPAVLPQACW*SFSLSV
Trigger: CACTGACAAGCTGAAGCTCCACCAGCAGGCTTGCGG...CAGCACTGCGGGCAGGGAGGAGGGCACCGTGGACGCGGGTACATCCCCGCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478660.6
3UTR-3UTR CCA 90 bp AGGATGTCCCCGACGTGGGCCTCCAAGCTCGCCGCAGCGGCGGGCCGGGCTCGGAGGAGAGGAACAAGGTaGTCGAAGACTGGGAGTCCA +
Preference number: 2 (lower is better)
Translates to: RMSPTWASKLAAAAGRARRRGTR*SKTGSP
Trigger: TGGACTCCCAGTCTTCGACCACCTTGTTCCTCTCCT...CCGAGCCCGGCCCGCCGCTGCGGCGAGCTTGGAGGCCCACGTCGGGGACATCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478660.6
3UTR-3UTR CCA 90 bp CTAGGGCCGTGCTTTCCGCTAGGCAGCTGCGCAGAGCAACCGCTCCTCCGCTGGCAGCGCTGGCGGACCTaGGGAAAAGGCCTGAGGCTC +
Preference number: 2 (lower is better)
Translates to: LGPCFPLGSCAEQPLLRWQRWRT*GKGLRL
Trigger: GAGCCTCAGGCCTTTTCCCCAGGTCCGCCAGCGCTG...CCAGCGGAGGAGCGGTTGCTCTGCGCAGCTGCCTAGCGGAAAGCACGGCCCTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478660.6
3UTR-3UTR CCA 90 bp CTAGGGCCGTGCTTTCCGCTAGGCAGCTGCGCAGAGCAACCGCTCCTCCGCTGGAGGATGTCCCCGACGTaGGCCTCCAAGCTCGCCGCA +
Preference number: 2 (lower is better)
Translates to: LGPCFPLGSCAEQPLLRWRMSPT*ASKLAA
Trigger: TGCGGCGAGCTTGGAGGCCCACGTCGGGGACATCCT...CCAGCGGAGGAGCGGTTGCTCTGCGCAGCTGCCTAGCGGAAAGCACGGCCCTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478660.6
3UTR-3UTR CCA 90 bp TTCGCTGCTGGGGAGGGACAGGCAGGGATGCCTGGTGCAAGCGATCCCTCGGCCCCAGGTGGCCGTTCATaGTCCGCAGCTCCACCAGGA +
Preference number: 2 (lower is better)
Translates to: FAAGEGQAGMPGASDPSAPGGRS*SAAPPG
Trigger: TCCTGGTGGAGCTGCGGACCATGAACGGCCACCTGG...GGCCGAGGGATCGCTTGCACCAGGCATCCCTGCCTGTCCCTCCCCAGCAGCGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478660.6
3UTR-3UTR TCA 90 bp ATCCTTCGCAGGGTGCCACCGCCGTTTCCAGGCACTTTTTCTGCTAGACGCTCAGGGCAGGGGCCGCCGTaGGAGAGCGGAGGAGGAGGG +
Preference number: 2 (lower is better)
Translates to: ILRRVPPPFPGTFSARRSGQGPP*ESGGGG
Trigger: CCCTCCTCCTCCGCTCTCTCACGGCGGCCCCTGCCC...TGAGCGTCTAGCAGAAAAAGTGCCTGGAAACGGCGGTGGCACCCTGCGAAGGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576263.5
3UTR-3UTR GCA 90 bp CCAGGACGGGCGGCGGCCGCTCCTTGTCATCCCCGCGTGTGCTGGGAGAGATGGCAAAACCCGCAAGCCTaGTGGTGGAGCTTCAGCTTG +
Preference number: 2 (lower is better)
Translates to: PGRAAAAPCHPRVCWERWQNPQA*WWSFSL
Trigger: CAAGCTGAAGCTCCACCAGCAGGCTTGCGGGTTTTG...CCATCTCTCCCAGCACACGCGGGGATGACAAGGAGCGGCCGCCGCCCGTCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478660.6
3UTR-3UTR GCA 90 bp GGGGCGGCGGGGATGTACCCGCGTCCACGGTGCCCTCCTCCCTGCCCGCAGTGCTGGGAGTCCATCTGCTaGAGAAAATGTGAGGCACTA +
Preference number: 2 (lower is better)
Translates to: GAAGMYPRPRCPPPCPQCWESIC*RKCEAL
Trigger: TAGTGCCTCACATTTTCTGCAGCAGATGGACTCCCA...GCACTGCGGGCAGGGAGGAGGGCACCGTGGACGCGGGTACATCCCCGCCGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000478660.6
3UTR-3UTR GCA 90 bp CTAGGGCCGTGCTTTCCGCTAGGCAGCTGCGCAGAGCAACCGCTCCTCCGCTGGTGGAGCTGGCCTCGCTaGTGCTTTGGCGACTTGCTT +
Preference number: 2 (lower is better)
Translates to: LGPCFPLGSCAEQPLLRWWSWPR*CFGDLL
Trigger: AAGCAAGTCGCCAAAGCAGCAGCGAGGCCAGCTCCA...CCAGCGGAGGAGCGGTTGCTCTGCGCAGCTGCCTAGCGGAAAGCACGGCCCTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576263.5
3UTR-3UTR CCA 90 bp CTAGGGCCGTGCTTTCCGCTAGGCAGCTGCGCAGAGCAACCGCTCCTCCGCTGGGGGAGTCCAAGGTACTaGGCTCTGAATCCCCATGGG +
Preference number: 2 (lower is better)
Translates to: LGPCFPLGSCAEQPLLRWGSPRY*ALNPHG
Trigger: CCCATGGGGATTCAGAGCCCAGTACCTTGGACTCCC...CCAGCGGAGGAGCGGTTGCTCTGCGCAGCTGCCTAGCGGAAAGCACGGCCCTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478660.6
3UTR-3UTR CCA 90 bp GCGGCCGCTCCTTGTCATCCCCGCGTGTGCTGGGAGAGATGGTCGAAGGGCAACGGCTCTGAATCCCCATaGGAGTCCATCTGCTGCAGA +
Preference number: 2 (lower is better)
Translates to: AAAPCHPRVCWERWSKGNGSESP*ESICCR
Trigger: TCTGCAGCAGATGGACTCCCATGGGGATTCAGAGCC...GTTGCCCTTCGACCATCTCTCCCAGCACACGCGGGGATGACAAGGAGCGGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478660.6
3UTR-3UTR GCA 90 bp AATGCGCCTAGGCACATCGGTGATGGCAGGAAGCCCAGTGCCCCGTGTGGAAGACGGCGGGGAAGACTGTaGCTGCCTGGGGTCTGTAAT +
Preference number: 2 (lower is better)
Translates to: NAPRHIGDGRKPSAPCGRRRGRL*LPGVCN
Trigger: ATTACAGACCCCAGGCAGGCACAGTCTTCCCCGCCG...TCTTCCACACGGGGCACTGGGCTTCCTGCCATCACCGATGTGCCTAGGCGCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483377.5
3UTR-3UTR TCA 90 bp CCCGCGCTATGCTGTCCAGGTGGCCGTTCATGGTCCGCAGCTCCACCAGGATGTCTGCTGCAGAAAATGTaGGGCACTAGGACCAGAGAG +
Preference number: 2 (lower is better)
Translates to: PALCCPGGRSWSAAPPGCLLQKM*GTRTRE
Trigger: CTCTCTGGTCCTAGTGCCTCACATTTTCTGCAGCAG...ACATCCTGGTGGAGCTGCGGACCATGAACGGCCACCTGGACAGCATAGCGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478660.6
3UTR-3UTR TCA 90 bp GTGGCAGTGTCATCATCTGAAATGCGCCTAGGCACATCGGTGATGGCAGGAAGCGAGGGCCGTGGGTTCTaGGGCGGGACACCTACTCTC +
Preference number: 2 (lower is better)
Translates to: VAVSSSEMRLGTSVMAGSEGRGF*GGTPTL
Trigger: GAGAGTAGGTGTCCCGCCTCAGAACCCACGGCCCTC...GCTTCCTGCCATCACCGATGTGCCTAGGCGCATTTCAGATGATGACACTGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483377.5
3UTR-3UTR CCA 90 bp CGAAGCCAGTTTGGTGAGGGCCCGCGCTATGCTGTCCAGGTGGCCGTTCATGGTAACCCGCAAGCCTGCTaGTGGAGCTTCAGCTTGTCA +
Preference number: 2 (lower is better)
Translates to: RSQFGEGPRYAVQVAVHGNPQAC*WSFSLS
Trigger: TGACAAGCTGAAGCTCCACCAGCAGGCTTGCGGGTT...ACCATGAACGGCCACCTGGACAGCATAGCGCGGGCCCTCACCAAACTGGCTTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478660.6
3UTR-3UTR TCA 90 bp ATCCTTCGCAGGGTGCCACCGCCGTTTCCAGGCACTTTTTCTGCTAGACGCTCAGGGTCTGTTTCACGCTaGAACGCTAGGGCCGTGCTT +
Preference number: 2 (lower is better)
Translates to: ILRRVPPPFPGTFSARRSGSVSR*NARAVL
Trigger: AAGCACGGCCCTAGCGTTTCAGCGTGAAACAGACCC...TGAGCGTCTAGCAGAAAAAGTGCCTGGAAACGGCGGTGGCACCCTGCGAAGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576263.5
3UTR-3UTR CCA 90 bp GAAGCACCTGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGCAGAAGTCAGTCTGCGGAGGGCACTaGTCCATACACAGCTGCCAC +
Preference number: 2 (lower is better)
Translates to: EAPAWLFLLRVEGQRQKSVCGGH*SIHSCH
Trigger: GTGGCAGCTGTGTATGGACCAGTGCCCTCCGCAGAC...TGACTTCTGCCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCAGGTGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646519.1
3UTR-3UTR CCA 90 bp CAAAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTTGCTGCCATTCGAGGTaGTGGTGCATGGCGGAAGCA +
Preference number: 2 (lower is better)
Translates to: QRLSVGPRGPYVLSAQLPCCHSR*WCMAEA
Trigger: TGCTTCCGCCATGCACCACCACCTCGAATGGCAGCA...AGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646519.1
3UTR-3UTR GCA 90 bp AAAGGTGGGTTTGAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCCCCCACACGCTGTCCTaGAATGCTGGGTGGCCTACA +
Preference number: 2 (lower is better)
Translates to: KGGFEKDQRTRGPLGFEGPHTLS*NAGWPT
Trigger: TGTAGGCCACCCAGCATTGCAGGACAGCGTGTGGGG...GCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTCAAACCCACCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp AAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTGCGTTGGGGAACTGCTGTaGCTTCCATCAGCGTCAACA +
Preference number: 2 (lower is better)
Translates to: KAVCRSPWAICPLSSATCVGELL*LPSAST
Trigger: TGTTGACGCTGATGGAAGCCACAGCAGTTCCCCAAC...GCAGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646519.1
3UTR-3UTR TCA 90 bp TGCTGGGAGAGATGGTCGAAGGGCAACCGGGGAGCCAGTCGACCAGACGCGGGGAGAAATAAAGGAGTCTaGACTAATCAAAACCCGCAA +
Preference number: 2 (lower is better)
Translates to: CWERWSKGNRGASRPDAGRNKGV*TNQNPQ
Trigger: TTGCGGGTTTTGATTAGTTCAGACTCCTTTATTTCT...CCCCGCGTCTGGTCGACTGGCTCCCCGGTTGCCCTTCGACCATCTCTCCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000478660.6
3UTR-3UTR TCA 90 bp TGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGCAGAAGTCAGAGGTGGCCGGTTATGGTCAAGGTaGAACTCTTGCCTCGTCCAC +
Preference number: 2 (lower is better)
Translates to: CLALLTESGRPEAEVRGGRLWSR*NSCLVH
Trigger: GTGGACGAGGCAAGAGTTTCACCTTGACCATAACCG...GCCACCTCTGACTTCTGCCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483377.5
3UTR-3UTR GCA 90 bp CAAAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTCTCAGCTCAGCTACCTaGTGGAACCTGCTGCCTTTT +
Preference number: 2 (lower is better)
Translates to: QRLSVGPRGPYVLSAQLPLSSAT*WNLLPF
Trigger: AAAAGGCAGCAGGTTCCAGCAGGTAGCTGAGCTGAG...AGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR GCA 90 bp TCTGAAGCACCTGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGCAGAAGCAAAACCCGCAAGCCTaGTGGTGGAGCTTCAGCTTG +
Preference number: 2 (lower is better)
Translates to: SEAPAWLFLLRVEGQRQKQNPQA*WWSFSL
Trigger: CAAGCTGAAGCTCCACCAGCAGGCTTGCGGGTTTTG...CTTCTGCCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCAGGTGCTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646519.1
3UTR-3UTR CCA 90 bp AAAGGTGGGTTTGAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCGATACGTGTGGGATGTaGCCCCCAGATACCACTGGG +
Preference number: 2 (lower is better)
Translates to: KGGFEKDQRTRGPLGFEGDTCGM*PPDTTG
Trigger: CCCAGTGGTATCTGGGGGCCACATCCCACACGTATC...GCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTCAAACCCACCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp CAAAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTTGTGACTGCCAGGAGTaGTCAAAGTGCATGCCACAG +
Preference number: 2 (lower is better)
Translates to: QRLSVGPRGPYVLSAQLPCDCQE*SKCMPQ
Trigger: CTGTGGCATGCACTTTGACCACTCCTGGCAGTCACA...AGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp TCTGAAGCACCTGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGCAGAAGAACCCGCAAGCCTGCTaGTGGAGCTTCAGCTTGTCA +
Preference number: 2 (lower is better)
Translates to: SEAPAWLFLLRVEGQRQKNPQAC*WSFSLS
Trigger: TGACAAGCTGAAGCTCCACCAGCAGGCTTGCGGGTT...CTTCTGCCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCAGGTGCTTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646519.1
3UTR-3UTR TCA 90 bp GAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCAAATCTCTGCTACCTCAACTGGTTTTGTaGGCTGTCTGCGGAGGGCAC +
Preference number: 2 (lower is better)
Translates to: EKDQRTRGPLGFEGKSLLPQLVL*AVCGGH
Trigger: GTGCCCTCCGCAGACAGCTCACAAAACCAGTTGAGG...TAGCAGAGATTTGCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp GAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCAAATCTCTGCTACCAATGAAGGGACCCTaGCTTTTCGGGGAGGAGAGC +
Preference number: 2 (lower is better)
Translates to: EKDQRTRGPLGFEGKSLLPMKGP*LFGEES
Trigger: GCTCTCCTCCCCGAAAAGTCAGGGTCCCTTCATTGG...TAGCAGAGATTTGCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp GTGGCAGTGTCATCATCTGAAATGCGCCTAGGCACATCGGTGATGGCAGGAAGCTGCGCCCTAAATCACTaGGGCGGTCAGAGAACAAAC +
Preference number: 2 (lower is better)
Translates to: VAVSSSEMRLGTSVMAGSCALNH*GGQRTN
Trigger: GTTTGTTCTCTGACCGCCTCAGTGATTTAGGGCGCA...GCTTCCTGCCATCACCGATGTGCCTAGGCGCATTTCAGATGATGACACTGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483377.5
3UTR-3UTR GCA 90 bp CAAAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTAATCTGCCATGTGACTaGCAGGAGTGGTCAAAGTGC +
Preference number: 2 (lower is better)
Translates to: QRLSVGPRGPYVLSAQLPNLPCD*QEWSKC
Trigger: GCACTTTGACCACTCCTGGCAGTCACATGGCAGATT...AGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR GCA 90 bp GAAGCACCTGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGCAGAAGTCATCAAGCTTCTGTCTGTaGCTTCTGGGTTCCCGAGGT +
Preference number: 2 (lower is better)
Translates to: EAPAWLFLLRVEGQRQKSSSFCL*LLGSRG
Trigger: ACCTCGGGAACCCAGAAGGCACAGACAGAAGCTTGA...TGACTTCTGCCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCAGGTGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483377.5
3UTR-3UTR CCA 90 bp CTTGGGAACTGCCTGGGGTCTGAAAAAGGGCCCAGTTCTGAAGCACCTGCCTGGGGCAGAAGTCAGAGGTaGCAGTGTCATCATCTGAAA +
Preference number: 2 (lower is better)
Translates to: LGNCLGSEKGPSSEAPAWGRSQR*QCHHLK
Trigger: TTTCAGATGATGACACTGCCACCTCTGACTTCTGCC...CCAGGCAGGTGCTTCAGAACTGGGCCCTTTTTCAGACCCCAGGCAGTTCCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000483377.5
3UTR-3UTR CCA 90 bp GTAGAGATATGGAGTGCTGCTGGTCTGGAAGGGTCCACTCTGGCTTTGGGAAGAGCCCCCAGATACCACTaGGCCACTGCTGAGGAATTT +
Preference number: 2 (lower is better)
Translates to: VEIWSAAGLEGSTLALGRAPRYH*ATAEEF
Trigger: AAATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGC...TCTTCCCAAAGCCAGAGTGGACCCTTCCAGACCAGCAGCACTCCATATCTCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646519.1
3UTR-3UTR TCA 90 bp AAAGGTGGGTTTGAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCACACAGCTGCCACCGTaGGGGTGTGAAGTTTCAAAG +
Preference number: 2 (lower is better)
Translates to: KGGFEKDQRTRGPLGFEGTQLPP*GCEVSK
Trigger: CTTTGAAACTTCACACCCTCACGGTGGCAGCTGTGT...GCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTCAAACCCACCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp GTGGCAGTGTCATCATCTGAAATGCGCCTAGGCACATCGGTGATGGCAGGAAGCCTTGGGGAGGATTTGTaGAGACGGTTATGGTCAAGG +
Preference number: 2 (lower is better)
Translates to: VAVSSSEMRLGTSVMAGSLGEDL*RRLWSR
Trigger: CCTTGACCATAACCGTCTTCACAAATCCTCCCCAAG...GCTTCCTGCCATCACCGATGTGCCTAGGCGCATTTCAGATGATGACACTGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483377.5
3UTR-3UTR GCA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTCCCCACACGCTGTCCTaGAATGCTGGGTGGCCTACA +
Preference number: 2 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPPHTLS*NAGWPT
Trigger: TGTAGGCCACCCAGCATTGCAGGACAGCGTGTGGGG...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTGTCTGCGGAGGGCACTaGTCCATACACAGCTGCCAC +
Preference number: 2 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPVCGGH*SIHSCH
Trigger: GTGGCAGCTGTGTATGGACCAGTGCCCTCCGCAGAC...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp AAAGGTGGGTTTGAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCTCCTGCAATGCTGGGTaGCCTACAAAGGTGGGTTTG +
Preference number: 2 (lower is better)
Translates to: KGGFEKDQRTRGPLGFEGSCNAG*PTKVGL
Trigger: CAAACCCACCTTTGTAGGCCACCCAGCATTGCAGGA...GCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTCAAACCCACCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp TCAGAGGTGGCAGTGTCATCATCTGAAATGCGCCTAGGCACATCGGTGATGGCATCTGTCTGTGCCTTCTaGGTTCCCGAGGTCCATCTA +
Preference number: 2 (lower is better)
Translates to: SEVAVSSSEMRLGTSVMASVCAF*VPEVHL
Trigger: TAGATGGACCTCGGGAACCCAGAAGGCACAGACAGA...TGCCATCACCGATGTGCCTAGGCGCATTTCAGATGATGACACTGCCACCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483377.5
3UTR-3UTR CCA 90 bp GTAGAGATATGGAGTGCTGCTGGTCTGGAAGGGTCCACTCTGGCTTTGGGAAGATGGATAGTGCATTCGTaGGTTGGAGAAGCGGCTCTC +
Preference number: 2 (lower is better)
Translates to: VEIWSAAGLEGSTLALGRWIVHS*VGEAAL
Trigger: GAGAGCCGCTTCTCCAACCCACGAATGCACTATCCA...TCTTCCCAAAGCCAGAGTGGACCCTTCCAGACCAGCAGCACTCCATATCTCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483377.5
ENST00000646519.1
3UTR-3UTR TCA 90 bp GAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCAAATCTCTGCTAACACAGCTGCCACCGTaGGGGTGTGAAGTTTCAAAG +
Preference number: 2 (lower is better)
Translates to: EKDQRTRGPLGFEGKSLLTQLPP*GCEVSK
Trigger: CTTTGAAACTTCACACCCTCACGGTGGCAGCTGTGT...TAGCAGAGATTTGCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTCCTCAACTGGTTTTGTaGGCTGTCTGCGGAGGGCAC +
Preference number: 2 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPPQLVL*AVCGGH
Trigger: GTGCCCTCCGCAGACAGCTCACAAAACCAGTTGAGG...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp AAAGGTGGGTTTGAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCTGGAAATCTGCCATGTaGCTGCCAGGAGTGGTCAAA +
Preference number: 2 (lower is better)
Translates to: KGGFEKDQRTRGPLGFEGWKSAM*LPGVVK
Trigger: TTTGACCACTCCTGGCAGTCACATGGCAGATTTCCA...GCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTCAAACCCACCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp TCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCGGAATTGAAGGGCTCTGGCAAGTaGGAGGCAGTGAGACCGTCT +
Preference number: 2 (lower is better)
Translates to: SCFHVLTWILGQSLSSELKGSGK*EAVRPS
Trigger: AGACGGTCTCACTGCCTCTCACTTGCCAGAGCCCTT...CAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR GCA 90 bp GAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCAAATCTCTGCTACCTGCTGGAACCTGCTaGCTTTTCAGAGGACCTACT +
Preference number: 2 (lower is better)
Translates to: EKDQRTRGPLGFEGKSLLPAGTC*LFRGPT
Trigger: AGTAGGTCCTCTGAAAAGGCAGCAGGTTCCAGCAGG...TAGCAGAGATTTGCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR GCA 90 bp AAATGCTTGGGAACTGCCTGGGGTCTGAAAAAGGGCCCAGTTCTGAAGCACCTGCCATGGGAGTCCATCTaGTGCAGAAAATGTGAGGCA +
Preference number: 2 (lower is better)
Translates to: KCLGTAWGLKKGPVLKHLPWESI*CRKCEA
Trigger: TGCCTCACATTTTCTGCAGCAGATGGACTCCCATGG...CAGGTGCTTCAGAACTGGGCCCTTTTTCAGACCCCAGGCAGTTCCCAAGCATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000646519.1
3UTR-3UTR CCA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTGATACGTGTGGGATGTaGCCCCCAGATACCACTGGG +
Preference number: 2 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPDTCGM*PPDTTG
Trigger: CCCAGTGGTATCTGGGGGCCACATCCCACACGTATC...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp TCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCGGAATTGGATACGTGTGGGATGTaGCCCCCAGATACCACTGGG +
Preference number: 2 (lower is better)
Translates to: SCFHVLTWILGQSLSSELDTCGM*PPDTTG
Trigger: CCCAGTGGTATCTGGGGGCCACATCCCACACGTATC...CAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp GTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAACTGGTTTGTCTGCGGAGGGCACTaGTCCATACACAGCTGCCAC +
Preference number: 2 (lower is better)
Translates to: VMEASILPHVPLVHLNWFVCGGH*SIHSCH
Trigger: GTGGCAGCTGTGTATGGACCAGTGCCCTCCGCAGAC...AAACCAGTTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTGTCTGTAGGTCCCCGTaGGCCATATGTCCTCTCAGC +
Preference number: 2 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPVCRSP*AICPLS
Trigger: GCTGAGAGGACATATGGCCCACGGGGACCTACAGAC...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp GAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCAAATCTCTGCTAGCCCCTTGCCCTCCTTaGCCCTCCATTGTAAGAAAT +
Preference number: 2 (lower is better)
Translates to: EKDQRTRGPLGFEGKSLLAPCPP*PSIVRN
Trigger: ATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGC...TAGCAGAGATTTGCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTGGAGTGCTGCTGGTCTaGAAGGGTCCACTCTGGCTT +
Preference number: 2 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPGVLLV*KGPLWL
Trigger: AAGCCAGAGTGGACCCTTCCAGACCAGCAGCACTCC...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646519.1
3UTR-3UTR GCA 90 bp TCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCGGAATTGTGGTCCATACACAGCTaGCACCGTGAGGGTGTGAAG +
Preference number: 2 (lower is better)
Translates to: SCFHVLTWILGQSLSSELWSIHS*HREGVK
Trigger: CTTCACACCCTCACGGTGGCAGCTGTGTATGGACCA...CAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR GCA 90 bp AGCCCCTTGCCCTCCTTGGCCCTCCATTGTAAGAAATACAAATGTCAAAGGCTGCCTGCTGGAACCTGCTaGCTTTTCAGAGGACCTACT +
Preference number: 2 (lower is better)
Translates to: SPLPSLALHCKKYKCQRLPAGTC*LFRGPT
Trigger: AGTAGGTCCTCTGAAAAGGCAGCAGGTTCCAGCAGG...CAGCCTTTGACATTTGTATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR GCA 90 bp TCCTTAAAGCTGTACACACATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCCCCCACACGCTGTCCTaGAATGCTGGGTGGCCTACA +
Preference number: 2 (lower is better)
Translates to: SLKLYTHLLPSEFITDGPPHTLS*NAGWPT
Trigger: TGTAGGCCACCCAGCATTGCAGGACAGCGTGTGGGG...GGGACCATCTGTGATAAATTCAGAAGGGAGGAGATGTGTGTACAGCTTTAAGGA
51% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR GCA 90 bp TGGCTCCTCCGAGGAGAGGAACAAGGTGGTCGAAGACTGGGAGTCCAAGGTACTCAGAGAGCCCTTTCCTaGTATTTGCTTGAGAAACAA +
Preference number: 2 (lower is better)
Translates to: WLLRGEEQGGRRLGVQGTQRALS*YLLEKQ
Trigger: TTGTTTCTCAAGCAAATAGCAGGAAAGGGCTCTCTG...AGTACCTTGGACTCCCAGTCTTCGACCACCTTGTTCCTCTCCTCGGAGGAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478660.6
3UTR-3UTR CCA 90 bp CAGATGGTCCCTAATGGTGTGGACTTCTCTGCTCATTTTGAAAGGGCTCTGGCAGTGAATTACCCCCATTaGGGTGGTTGGAGTGAGGGT +
Preference number: 2 (lower is better)
Translates to: QMVPNGVDFSAHFERALAVNYPH*GGWSEG
Trigger: ACCCTCACTCCAACCACCCCAATGGGGGTAATTCAC...TGCCAGAGCCCTTTCAAAATGAGCAGAGAAGTCCACACCATTAGGGACCATCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTTGTGGTAGTGAGTGGTaGCGGACATACCGAGGGACA +
Preference number: 2 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPCGSEW*RTYRGT
Trigger: TGTCCCTCGGTATGTCCGCCACCACTCACTACCACA...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646519.1
3UTR CAA 90 bp GTGAAACTCTTGCCTCGTCCACTCCGGCCCACAAATCTCAGATCGTaGAACCTTGCTACTTGGTTTTTCATAACAGCAGAGGCATTCCGG +
Preference number: 2 (lower is better)
Translates to: VKLLPRPLRPTNLRS*NLATWFFITAEAFR
Trigger: CCGGAATGCCTCTGCTGTTATGAAAAACCAAGTAGCAAGGTTCAACGATCTGAGATTTGTGGGCCGGAGTGGACGAGGCAAGAGTTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483377.5
3UTR-3UTR TCA 90 bp ATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTAATGGTGTGGACTTCTCTTGCTCTTCTCCCTCCTaGACCTGGAGTCCACCTCTC +
Preference number: 2 (lower is better)
Translates to: ISSLLNLSQMVPNGVDFSCSSPS*TWSPPL
Trigger: GAGAGGTGGACTCCAGGTTCAGGAGGGAGAAGAGCA...AGAGAAGTCCACACCATTAGGGACCATCTGTGATAAATTCAGAAGGGAGGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp TCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCGGAATTGACACAGCTGCCACCGTaGGGGTGTGAAGTTTCAAAG +
Preference number: 2 (lower is better)
Translates to: SCFHVLTWILGQSLSSELTQLPP*GCEVSK
Trigger: CTTTGAAACTTCACACCCTCACGGTGGCAGCTGTGT...CAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTACACAGCTGCCACCGTaGGGGTGTGAAGTTTCAAAG +
Preference number: 2 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPTQLPP*GCEVSK
Trigger: CTTTGAAACTTCACACCCTCACGGTGGCAGCTGTGT...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp TCCTTAAAGCTGTACACACATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCCCTCAACTGGTTTTGTaGGCTGTCTGCGGAGGGCAC +
Preference number: 2 (lower is better)
Translates to: SLKLYTHLLPSEFITDGPPQLVL*AVCGGH
Trigger: GTGCCCTCCGCAGACAGCTCACAAAACCAGTTGAGG...GGGACCATCTGTGATAAATTCAGAAGGGAGGAGATGTGTGTACAGCTTTAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp CAAAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTAAGAGTTATTCTGAATaGTGGTACTGTGATGGAAGC +
Preference number: 2 (lower is better)
Translates to: QRLSVGPRGPYVLSAQLPKSYSE*WYCDGS
Trigger: GCTTCCATCACAGTACCATCATTCAGAATAACTCTT...AGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp ATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTAATGGTGTGGACTTCTCTCCAATGAAGGGACCCTaGCTTTTCGGGGAGGAGAGC +
Preference number: 2 (lower is better)
Translates to: ISSLLNLSQMVPNGVDFSPMKGP*LFGEES
Trigger: GCTCTCCTCCCCGAAAAGTCAGGGTCCCTTCATTGG...AGAGAAGTCCACACCATTAGGGACCATCTGTGATAAATTCAGAAGGGAGGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp CAGATGGTCCCTAATGGTGTGGACTTCTCTGCTCATTTTGAAAGGGCTCTGGCAGCAAGTGAGAGGCAGTaGGACCGTCTAAAGAGCAAA +
Preference number: 2 (lower is better)
Translates to: QMVPNGVDFSAHFERALAASERQ*DRLKSK
Trigger: TTTGCTCTTTAGACGGTCTCACTGCCTCTCACTTGC...TGCCAGAGCCCTTTCAAAATGAGCAGAGAAGTCCACACCATTAGGGACCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp GCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCCCACTGGGCCACTGCTaGGGAATTTCAATATGGTCG +
Preference number: 2 (lower is better)
Translates to: ANASCFHVLTWILGQSLSPLGHC*GISIWS
Trigger: CGACCATATTGAAATTCCTCAGCAGTGGCCCAGTGG...GGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646519.1
3UTR-3UTR GCA 90 bp AAAGGTGGGTTTGAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCATCTCTGCTAAATTCTaGTTGGGTGGGTGGAGGATT +
Preference number: 2 (lower is better)
Translates to: KGGFEKDQRTRGPLGFEGISAKF*LGGWRI
Trigger: AATCCTCCACCCACCCAAGCAGAATTTAGCAGAGAT...GCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTCAAACCCACCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR GCA 90 bp CAGATGGTCCCTAATGGTGTGGACTTCTCTGCTCATTTTGAAAGGGCTCTGGCAAGTAGAGATATGGAGTaGTGCTGGTCTGGAAGGGTC +
Preference number: 2 (lower is better)
Translates to: QMVPNGVDFSAHFERALASRDME*CWSGRV
Trigger: GACCCTTCCAGACCAGCAGCACTCCATATCTCTACT...TGCCAGAGCCCTTTCAAAATGAGCAGAGAAGTCCACACCATTAGGGACCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646519.1
3UTR-3UTR GCA 90 bp AAAGGTGGGTTTGAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCAGGATCCTGACGAAGTaGCATAGTAGAGATATGGAG +
Preference number: 2 (lower is better)
Translates to: KGGFEKDQRTRGPLGFEGRILTK*HSRDME
Trigger: CTCCATATCTCTACTATGGCACTTCGTCAGGATCCT...GCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTCAAACCCACCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646519.1
3UTR-3UTR CCA 90 bp TCCTTAAAGCTGTACACACATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCGATACGTGTGGGATGTaGCCCCCAGATACCACTGGG +
Preference number: 2 (lower is better)
Translates to: SLKLYTHLLPSEFITDGPDTCGM*PPDTTG
Trigger: CCCAGTGGTATCTGGGGGCCACATCCCACACGTATC...GGGACCATCTGTGATAAATTCAGAAGGGAGGAGATGTGTGTACAGCTTTAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp ATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTAATGGTGTGGACTTCTCTCTGCCAGTGGGGCCTTaGGTAAGGCAGATTGGGGTT +
Preference number: 2 (lower is better)
Translates to: ISSLLNLSQMVPNGVDFSLPVGP*VRQIGV
Trigger: AACCCCAATCTGCCTTACCCAAGGCCCCACTGGCAG...AGAGAAGTCCACACCATTAGGGACCATCTGTGATAAATTCAGAAGGGAGGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp TCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCGGAATTGAGCTCAGCTACCTGCTaGAACCTGCTGCCTTTTCAG +
Preference number: 2 (lower is better)
Translates to: SCFHVLTWILGQSLSSELSSATC*NLLPFQ
Trigger: CTGAAAAGGCAGCAGGTTCCAGCAGGTAGCTGAGCT...CAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp TCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCGGAATTGTGTGACTGCCAGGAGTaGTCAAAGTGCATGCCACAG +
Preference number: 2 (lower is better)
Translates to: SCFHVLTWILGQSLSSELCDCQE*SKCMPQ
Trigger: CTGTGGCATGCACTTTGACCACTCCTGGCAGTCACA...CAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp GCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTGTGACTGCCAGGAGTaGTCAAAGTGCATGCCACAG +
Preference number: 2 (lower is better)
Translates to: ANASCFHVLTWILGQSLSCDCQE*SKCMPQ
Trigger: CTGTGGCATGCACTTTGACCACTCCTGGCAGTCACA...GGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp TCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCGGAATTGGTGAATTACCCCCATTaGGGTGGTTGGAGTGAGGGT +
Preference number: 2 (lower is better)
Translates to: SCFHVLTWILGQSLSSELVNYPH*GGWSEG
Trigger: ACCCTCACTCCAACCACCCCAATGGGGGTAATTCAC...CAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp TCCTTAAAGCTGTACACACATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCCCGCAAGCCTGCTGGTaGAGCTTCAGCTTGTCAGTG +
Preference number: 2 (lower is better)
Translates to: SLKLYTHLLPSEFITDGPPQACW*SFSLSV
Trigger: CACTGACAAGCTGAAGCTCCACCAGCAGGCTTGCGG...GGGACCATCTGTGATAAATTCAGAAGGGAGGAGATGTGTGTACAGCTTTAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646519.1
3UTR-3UTR TCA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTTGGAAATCTGCCATGTaGCTGCCAGGAGTGGTCAAA +
Preference number: 2 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPWKSAM*LPGVVK
Trigger: TTTGACCACTCCTGGCAGTCACATGGCAGATTTCCA...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp TCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCGGAATTGGGGGCCGTTAGGGTTTaGAGGCAAATCTCTGCTAAA +
Preference number: 2 (lower is better)
Translates to: SCFHVLTWILGQSLSSELGAVRV*RQISAK
Trigger: TTTAGCAGAGATTTGCCTTCAAACCCTAACGGCCCC...CAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp GCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCGGGGCCGTTAGGGTTTaGAGGCAAATCTCTGCTAAA +
Preference number: 2 (lower is better)
Translates to: ANASCFHVLTWILGQSLSGAVRV*RQISAK
Trigger: TTTAGCAGAGATTTGCCTTCAAACCCTAACGGCCCC...GGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp GCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCACTCATCCACAATCATaGCCTGTGGCACAAAGCGGA +
Preference number: 2 (lower is better)
Translates to: ANASCFHVLTWILGQSLSTHPQS*PVAQSG
Trigger: TCCGCTTTGTGCCACAGGTCATGATTGTGGATGAGT...GGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR GCA 90 bp CTGAATGATGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGTGGTCCATACACAGCTaGCACCGTGAGGGTGTGAAG +
Preference number: 2 (lower is better)
Translates to: LNDGTVMEASILPHVPLVWSIHS*HREGVK
Trigger: CTTCACACCCTCACGGTGGCAGCTGTGTATGGACCA...CACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCATCATTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp AGCCCCTTGCCCTCCTTGGCCCTCCATTGTAAGAAATACAAATGTCAAAGGCTGTTAGTGCACCTCAACTaGTTTTGTGAGCTGTCTGCG +
Preference number: 2 (lower is better)
Translates to: SPLPSLALHCKKYKCQRLLVHLN*FCELSA
Trigger: CGCAGACAGCTCACAAAACCAGTTGAGGTGCACTAA...CAGCCTTTGACATTTGTATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp TCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCGGAATTGTTCTGCTTGGGTGGGTaGAGGATTCCAATGAAGGGA +
Preference number: 2 (lower is better)
Translates to: SCFHVLTWILGQSLSSELFCLGG*RIPMKG
Trigger: TCCCTTCATTGGAATCCTCCACCCACCCAAGCAGAA...CAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp CCCAGTTCTGAAGCACCTGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGTTGAACCTTGCTACTTaGTTTTTCATAACAGCAGAG +
Preference number: 2 (lower is better)
Translates to: PSSEAPAWLFLLRVEGQRLNLAT*FFITAE
Trigger: CTCTGCTGTTATGAAAAACCAAGTAGCAAGGTTCAA...CCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCAGGTGCTTCAGAACTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483377.5
3UTR-3UTR TCA 90 bp GCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCACTCCCAAAGGACAGTaGTGTCATTCTGCTCCTCTA +
Preference number: 2 (lower is better)
Translates to: ANASCFHVLTWILGQSLSTPKGQ*CHSAPL
Trigger: TAGAGGAGCAGAATGACATCACTGTCCTTTGGGAGT...GGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp CTTGAGCCTTCTGCTTCTCAATATCTACCCTCTTATGGCTGCAAGATCATGACTAGAAGCGGCTCTCAGTaGGGGATGAAATGCTTGGGA +
Preference number: 2 (lower is better)
Translates to: LEPSASQYLPSYGCKIMTRSGSQ*GMKCLG
Trigger: TCCCAAGCATTTCATCCCTCACTGAGAGCCGCTTCT...AGTCATGATCTTGCAGCCATAAGAGGGTAGATATTGAGAAGCAGAAGGCTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646519.1
3UTR-3UTR GCA 90 bp AAAGGTGGGTTTGAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCGTTAAGAATCTCTGGTaGAATTTTGCTCTCCTGTAC +
Preference number: 2 (lower is better)
Translates to: KGGFEKDQRTRGPLGFEGVKNLW*NFALLY
Trigger: GTACAGGAGAGCAAAATTGCACCAGAGATTCTTAAC...GCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTCAAACCCACCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR GCA 90 bp AAAGGTGGGTTTGAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCTTCTGCTCCTCTAAATaGAAATTCTGTGGAAAGCTG +
Preference number: 2 (lower is better)
Translates to: KGGFEKDQRTRGPLGFEGFCSSK*KFCGKL
Trigger: CAGCTTTCCACAGAATTTGCATTTAGAGGAGCAGAA...GCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTCAAACCCACCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR GCA 90 bp GTGGCAGTGTCATCATCTGAAATGCGCCTAGGCACATCGGTGATGGCAGGAAGCCAGATCGTTGAACCTTaGTACTTGGTTTTTCATAAC +
Preference number: 2 (lower is better)
Translates to: VAVSSSEMRLGTSVMAGSQIVEP*YLVFHN
Trigger: GTTATGAAAAACCAAGTAGCAAGGTTCAACGATCTG...GCTTCCTGCCATCACCGATGTGCCTAGGCGCATTTCAGATGATGACACTGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483377.5
3UTR-3UTR CCA 90 bp AATCATGACCTGTGGCACAAAGCGGAATTTTTACAATATGTGCATGGAAAGCAAGTCTGCGGAGGGCACTaGTCCATACACAGCTGCCAC +
Preference number: 2 (lower is better)
Translates to: NHDLWHKAEFLQYVHGKQVCGGH*SIHSCH
Trigger: GTGGCAGCTGTGTATGGACCAGTGCCCTCCGCAGAC...TTGCTTTCCATGCACATATTGTAAAAATTCCGCTTTGTGCCACAGGTCATGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp AAAGGTGGGTTTGAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCCTTTGCTATGAAGCCTaGCGATTTAGAGTTTTGCTT +
Preference number: 2 (lower is better)
Translates to: KGGFEKDQRTRGPLGFEGLCYEA*RFRVLL
Trigger: AAGCAAAACTCTAAATCGCCAGGCTTCATAGCAAAG...GCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTCAAACCCACCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp TGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAGAACCACGCTGCCAGTGGGGCCTTaGGTAAGGCAGATTGGGGTT +
Preference number: 2 (lower is better)
Translates to: CIEKTANSSNVCATKRTTLPVGP*VRQIGV
Trigger: AACCCCAATCTGCCTTACCCAAGGCCCCACTGGCAG...CGTGGTTCTCTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp ATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTAATGGTGTGGACTTCTCTAGCTCAGCTACCTGCTaGAACCTGCTGCCTTTTCAG +
Preference number: 2 (lower is better)
Translates to: ISSLLNLSQMVPNGVDFSSSATC*NLLPFQ
Trigger: CTGAAAAGGCAGCAGGTTCCAGCAGGTAGCTGAGCT...AGAGAAGTCCACACCATTAGGGACCATCTGTGATAAATTCAGAAGGGAGGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp TCCTTAAAGCTGTACACACATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCGCCCCTTGCCCTCCTTaGCCCTCCATTGTAAGAAAT +
Preference number: 2 (lower is better)
Translates to: SLKLYTHLLPSEFITDGPAPCPP*PSIVRN
Trigger: ATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGC...GGGACCATCTGTGATAAATTCAGAAGGGAGGAGATGTGTGTACAGCTTTAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp ACTTTTGCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCGCCCCTTGCCCTCCTTaGCCCTCCATTGTAAGAAAT +
Preference number: 2 (lower is better)
Translates to: TFANASCFHVLTWILGQSAPCPP*PSIVRN
Trigger: ATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGC...GGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGCAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp ATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTAATGGTGTGGACTTCTCTTCCTGCAATGCTGGGTaGCCTACAAAGGTGGGTTTG +
Preference number: 2 (lower is better)
Translates to: ISSLLNLSQMVPNGVDFSSCNAG*PTKVGL
Trigger: CAAACCCACCTTTGTAGGCCACCCAGCATTGCAGGA...AGAGAAGTCCACACCATTAGGGACCATCTGTGATAAATTCAGAAGGGAGGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp TCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCGGAATTGATTTTGAAAGGGCTCTaGCAAGTGAGAGGCAGTGAG +
Preference number: 2 (lower is better)
Translates to: SCFHVLTWILGQSLSSELILKGL*QVRGSE
Trigger: CTCACTGCCTCTCACTTGCCAGAGCCCTTTCAAAAT...CAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR CAA 90 bp TTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCGGAATaGAGGGAATCCTTAAAGCTGTACACACATCTCCTCCCTTCTGAA +
Preference number: 2 (lower is better)
Translates to: FHVLTWILGQSLSSE*RESLKLYTHLLPSE
Trigger: TTCAGAAGGGAGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp AGCCCCTTGCCCTCCTTGGCCCTCCATTGTAAGAAATACAAATGTCAAAGGCTGTGTGCGGCTTTTAGCTaGCTATGTCTTTGCTATGAA +
Preference number: 2 (lower is better)
Translates to: SPLPSLALHCKKYKCQRLCAAFS*LCLCYE
Trigger: TTCATAGCAAAGACATAGTCAGCTAAAAGCCGCACA...CAGCCTTTGACATTTGTATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp AATCATGACCTGTGGCACAAAGCGGAATTTTTACAATATGTGCATGGAAAGCAACCAATGAAGGGACCCTaGCTTTTCGGGGAGGAGAGC +
Preference number: 2 (lower is better)
Translates to: NHDLWHKAEFLQYVHGKQPMKGP*LFGEES
Trigger: GCTCTCCTCCCCGAAAAGTCAGGGTCCCTTCATTGG...TTGCTTTCCATGCACATATTGTAAAAATTCCGCTTTGTGCCACAGGTCATGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp GTAGAGATATGGAGTGCTGCTGGTCTGGAAGGGTCCACTCTGGCTTTGGGAAGAAGAAATAAAGGAGTCTaGACTAATCAAAACCCGCAA +
Preference number: 2 (lower is better)
Translates to: VEIWSAAGLEGSTLALGRRNKGV*TNQNPQ
Trigger: TTGCGGGTTTTGATTAGTTCAGACTCCTTTATTTCT...TCTTCCCAAAGCCAGAGTGGACCCTTCCAGACCAGCAGCACTCCATATCTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646519.1
3UTR-3UTR GCA 90 bp GAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCAAATCTCTGCTAGTTAAGAATCTCTGGTaGAATTTTGCTCTCCTGTAC +
Preference number: 2 (lower is better)
Translates to: EKDQRTRGPLGFEGKSLLVKNLW*NFALLY
Trigger: GTACAGGAGAGCAAAATTGCACCAGAGATTCTTAAC...TAGCAGAGATTTGCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR GCA 90 bp ATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTAATGGTGTGGACTTCTCTAATCTGCCATGTGACTaGCAGGAGTGGTCAAAGTGC +
Preference number: 2 (lower is better)
Translates to: ISSLLNLSQMVPNGVDFSNLPCD*QEWSKC
Trigger: GCACTTTGACCACTCCTGGCAGTCACATGGCAGATT...AGAGAAGTCCACACCATTAGGGACCATCTGTGATAAATTCAGAAGGGAGGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR GCA 90 bp GCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCAAATGGACAGTGGTGTaGTTCAAGCTACCACACACA +
Preference number: 2 (lower is better)
Translates to: ANASCFHVLTWILGQSLSKWTVV*FKLPHT
Trigger: TGTGTGTGGTAGCTTGAAGCACACCACTGTCCATTT...GGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR GCA 90 bp TCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCGGAATTGTTCTGGGTTGCTGCCTaGAGCCACTATAGTAACATT +
Preference number: 2 (lower is better)
Translates to: SCFHVLTWILGQSLSSELFWVAA*SHYSNI
Trigger: AATGTTACTATAGTGGCTGCAGGCAGCAACCCAGAA...CAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp AGCCCCTTGCCCTCCTTGGCCCTCCATTGTAAGAAATACAAATGTCAAAGGCTGTTTGGTAAGGCTGGTTaGTTAAGAATCTCTGGTGCA +
Preference number: 2 (lower is better)
Translates to: SPLPSLALHCKKYKCQRLFGKAG*LRISGA
Trigger: TGCACCAGAGATTCTTAACCAACCAGCCTTACCAAA...CAGCCTTTGACATTTGTATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp TCCTTAAAGCTGTACACACATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTTGGGTAAGGCAGATTaGGGTTCCCCTGTTGTGTTG +
Preference number: 2 (lower is better)
Translates to: SLKLYTHLLPSEFITDGPLGKAD*GSPVVL
Trigger: CAACACAACAGGGGAACCCCAATCTGCCTTACCCAA...GGGACCATCTGTGATAAATTCAGAAGGGAGGAGATGTGTGTACAGCTTTAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp ACTTTTGCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCTTGGGTAAGGCAGATTaGGGTTCCCCTGTTGTGTTG +
Preference number: 2 (lower is better)
Translates to: TFANASCFHVLTWILGQSLGKAD*GSPVVL
Trigger: CAACACAACAGGGGAACCCCAATCTGCCTTACCCAA...GGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGCAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp ACTTTTGCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCTTCTGCTTGGGTGGGTaGAGGATTCCAATGAAGGGA +
Preference number: 2 (lower is better)
Translates to: TFANASCFHVLTWILGQSFCLGG*RIPMKG
Trigger: TCCCTTCATTGGAATCCTCCACCCACCCAAGCAGAA...GGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGCAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp TCCTTAAAGCTGTACACACATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCCTTCTAAAGTGTTTCTaGGTTGCTGCCTGCAGCCAC +
Preference number: 2 (lower is better)
Translates to: SLKLYTHLLPSEFITDGPLLKCF*VAACSH
Trigger: GTGGCTGCAGGCAGCAACCCAGAAACACTTTAGAAG...GGGACCATCTGTGATAAATTCAGAAGGGAGGAGATGTGTGTACAGCTTTAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTTGGTCCCTAATGGTGTaGACTTCTCTGCTCATTTTG +
Preference number: 2 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPWSLMV*TSLLIL
Trigger: CAAAATGAGCAGAGAAGTCCACACCATTAGGGACCA...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp AAATGTGGCTGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGATGGCGGAAGCATTCTaGAAGGAGACCGGTCTCCCC +
Preference number: 2 (lower is better)
Translates to: KCGCIEKTANSSNVCATKMAEAF*KETGLP
Trigger: GGGGAGACCGGTCTCCTTCCAGAATGCTTCCGCCAT...CTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCAGCCACATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646519.1
3UTR CAA 90 bp AGCTCAAATTCATACACACTAGTAGACACCAAACTCCACAGCCCCTaGCCCTCCTTGGCCCTCCATTGTAAGAAATACAAATGTCAAAGG +
Preference number: 2 (lower is better)
Translates to: SSNSYTLVDTKLHSP*PSLALHCKKYKCQR
Trigger: CCTTTGACATTTGTATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCTGTGGAGTTTGGTGTCTACTAGTGTGTATGAATTTGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp AGCCCCTTGCCCTCCTTGGCCCTCCATTGTAAGAAATACAAATGTCAAAGGCTGAAGAGTTATTCTGAATaGTGGTACTGTGATGGAAGC +
Preference number: 2 (lower is better)
Translates to: SPLPSLALHCKKYKCQRLKSYSE*WYCDGS
Trigger: GCTTCCATCACAGTACCATCATTCAGAATAACTCTT...CAGCCTTTGACATTTGTATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp TCCTTAAAGCTGTACACACATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCGACCTGCAGCATGTCTaGAAGCAGAAATTGGAAGAG +
Preference number: 2 (lower is better)
Translates to: SLKLYTHLLPSEFITDGPDLQHV*KQKLEE
Trigger: CTCTTCCAATTTCTGCTTTCAGACATGCTGCAGGTC...GGGACCATCTGTGATAAATTCAGAAGGGAGGAGATGTGTGTACAGCTTTAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp GCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCGGTGGTGTCATTAGATaGTCCTTGTTTGGATTAAGG +
Preference number: 2 (lower is better)
Translates to: ANASCFHVLTWILGQSLSGGVIR*SLFGLR
Trigger: CCTTAATCCAAACAAGGATCATCTAATGACACCACC...GGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp ATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTAATGGTGTGGACTTCTCTCTACAAAGGTGGGTTTaGGAAGGACCAGAGAACAAG +
Preference number: 2 (lower is better)
Translates to: ISSLLNLSQMVPNGVDFSLQRWV*EGPENK
Trigger: CTTGTTCTCTGGTCCTTCTCAAACCCACCTTTGTAG...AGAGAAGTCCACACCATTAGGGACCATCTGTGATAAATTCAGAAGGGAGGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR GCA 90 bp TGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAGAACCACGCTCAGCTCAGCTACCTaGTGGAACCTGCTGCCTTTT +
Preference number: 2 (lower is better)
Translates to: CIEKTANSSNVCATKRTTLSSAT*WNLLPF
Trigger: AAAAGGCAGCAGGTTCCAGCAGGTAGCTGAGCTGAG...CGTGGTTCTCTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR GCA 90 bp TCAGAGGTGGCAGTGTCATCATCTGAAATGCGCCTAGGCACATCGGTGATGGCATACTGTAACTTTAATTaGTCTGTGATAGGTAGCTAC +
Preference number: 2 (lower is better)
Translates to: SEVAVSSSEMRLGTSVMAYCNFN*SVIGSY
Trigger: GTAGCTACCTATCACAGAGCAATTAAAGTTACAGTA...TGCCATCACCGATGTGCCTAGGCGCATTTCAGATGATGACACTGCCACCTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483377.5
3UTR-3UTR GCA 90 bp ATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTAATGGTGTGGACTTCTCTTTGGATTTAATAGCGTaGTGCCATTCGAGGTGGTGG +
Preference number: 2 (lower is better)
Translates to: ISSLLNLSQMVPNGVDFSLDLIA*CHSRWW
Trigger: CCACCACCTCGAATGGCAGCACGCTATTAAATCCAA...AGAGAAGTCCACACCATTAGGGACCATCTGTGATAAATTCAGAAGGGAGGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646519.1
3UTR-3UTR CCA 90 bp GCTTATTTATCTAAGCATACTTGGTATACGGCCTTTAGAAGGCAAAGTGTTTTGCTGCCAGTGGGGCCTTaGGTAAGGCAGATTGGGGTT +
Preference number: 2 (lower is better)
Translates to: AYLSKHTWYTAFRRQSVLLPVGP*VRQIGV
Trigger: AACCCCAATCTGCCTTACCCAAGGCCCCACTGGCAG...CAAAACACTTTGCCTTCTAAAGGCCGTATACCAAGTATGCTTAGATAAATAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp CTTTGCTTTGGTCTTGAAATCACAAATCAAACACATGACCCAGTGCAAATTAAGGTCTGTAGGTCCCCGTaGGCCATATGTCCTCTCAGC +
Preference number: 2 (lower is better)
Translates to: LCFGLEITNQTHDPVQIKVCRSP*AICPLS
Trigger: GCTGAGAGGACATATGGCCCACGGGGACCTACAGAC...CTTAATTTGCACTGGGTCATGTGTTTGATTTGTGATTTCAAGACCAAAGCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp TCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCGGAATTGCAAATAAATGGACAGTaGTGTGCTTCAAGCTACCAC +
Preference number: 2 (lower is better)
Translates to: SCFHVLTWILGQSLSSELQINGQ*CASSYH
Trigger: GTGGTAGCTTGAAGCACACCACTGTCCATTTATTTG...CAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTCTAAAACCAAAGCTGTaGTACCTGTTCTGGAACTCT +
Preference number: 2 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPLKPKL*YLFWNS
Trigger: AGAGTTCCAGAACAGGTACCACAGCTTTGGTTTTAG...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp TCCTTAAAGCTGTACACACATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCATTTTGAAAGGGCTCTaGCAAGTGAGAGGCAGTGAG +
Preference number: 2 (lower is better)
Translates to: SLKLYTHLLPSEFITDGPILKGL*QVRGSE
Trigger: CTCACTGCCTCTCACTTGCCAGAGCCCTTTCAAAAT...GGGACCATCTGTGATAAATTCAGAAGGGAGGAGATGTGTGTACAGCTTTAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp AAATGTGGCTGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGTGCTTGGGAACTGCCTaGGGTCTGAAAAAGGGCCCA +
Preference number: 2 (lower is better)
Translates to: KCGCIEKTANSSNVCATKCLGTA*GLKKGP
Trigger: TGGGCCCTTTTTCAGACCCCAGGCAGTTCCCAAGCA...CTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCAGCCACATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646519.1
3UTR-3UTR CCA 90 bp AAATTAGAAAACCACATCACTCCAGCATTTCATGCTGATAAAGGGCTAAAGGTTCGAGGTGGTGGTGCATaGCGGAAGCATTCTGGAAGG +
Preference number: 2 (lower is better)
Translates to: KLENHITPAFHADKGLKVRGGGA*RKHSGR
Trigger: CCTTCCAGAATGCTTCCGCCATGCACCACCACCTCG...AACCTTTAGCCCTTTATCAGCATGAAATGCTGGAGTGATGTGGTTTTCTAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646519.1
3UTR-3UTR CCA 90 bp AATCATGACCTGTGGCACAAAGCGGAATTTTTACAATATGTGCATGGAAAGCAATGCCATTCGAGGTGGTaGTGCATGGCGGAAGCATTC +
Preference number: 2 (lower is better)
Translates to: NHDLWHKAEFLQYVHGKQCHSRW*CMAEAF
Trigger: GAATGCTTCCGCCATGCACCACCACCTCGAATGGCA...TTGCTTTCCATGCACATATTGTAAAAATTCCGCTTTGTGCCACAGGTCATGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646519.1
3UTR-3UTR TCA 90 bp CAGATGGTCCCTAATGGTGTGGACTTCTCTGCTCATTTTGAAAGGGCTCTGGCATATATATGTATATATTaGTACGTGTGGGATGTGGCC +
Preference number: 2 (lower is better)
Translates to: QMVPNGVDFSAHFERALAYICIY*YVWDVA
Trigger: GGCCACATCCCACACGTATCAATATATACATATATA...TGCCAGAGCCCTTTCAAAATGAGCAGAGAAGTCCACACCATTAGGGACCATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp TCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCGGAATTGAAGAGTTATTCTGAATaGTGGTACTGTGATGGAAGC +
Preference number: 2 (lower is better)
Translates to: SCFHVLTWILGQSLSSELKSYSE*WYCDGS
Trigger: GCTTCCATCACAGTACCATCATTCAGAATAACTCTT...CAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp AGCCCCTTGCCCTCCTTGGCCCTCCATTGTAAGAAATACAAATGTCAAAGGCTGTGTGCCTGGATGAACTaGAATTGCTTAGCAATATTT +
Preference number: 2 (lower is better)
Translates to: SPLPSLALHCKKYKCQRLCAWMN*NCLAIF
Trigger: AAATATTGCTAAGCAATTTCAGTTCATCCAGGCACA...CAGCCTTTGACATTTGTATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp ACTTTTGCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCAAACTGATAGGATCCTaGCGAAGTGCCATAGTAGAG +
Preference number: 2 (lower is better)
Translates to: TFANASCFHVLTWILGQSKLIGS*RSAIVE
Trigger: CTCTACTATGGCACTTCGTCAGGATCCTATCAGTTT...GGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGCAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646519.1
3UTR-3UTR GCA 90 bp AAATTAGAAAACCACATCACTCCAGCATTTCATGCTGATAAAGGGCTAAAGGTTTGGTCCATACACAGCTaGCACCGTGAGGGTGTGAAG +
Preference number: 2 (lower is better)
Translates to: KLENHITPAFHADKGLKVWSIHS*HREGVK
Trigger: CTTCACACCCTCACGGTGGCAGCTGTGTATGGACCA...AACCTTTAGCCCTTTATCAGCATGAAATGCTGGAGTGATGTGGTTTTCTAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR GCA 90 bp ATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTAATGGTGTGGACTTCTCTTCTCTGGTGCAATTTTaGTCTCCTGTACTAGGTGTC +
Preference number: 2 (lower is better)
Translates to: ISSLLNLSQMVPNGVDFSSLVQF*SPVLGV
Trigger: GACACCTAGTACAGGAGAGCAAAATTGCACCAGAGA...AGAGAAGTCCACACCATTAGGGACCATCTGTGATAAATTCAGAAGGGAGGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR GCA 90 bp GCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCGTTAAGAATCTCTGGTaGAATTTTGCTCTCCTGTAC +
Preference number: 2 (lower is better)
Translates to: ANASCFHVLTWILGQSLSVKNLW*NFALLY
Trigger: GTACAGGAGAGCAAAATTGCACCAGAGATTCTTAAC...GGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR GCA 90 bp TGCTATGAAGCCTGGCGATTTAGAGTTTTGCTTAACTATGAAACCACAGAACATCCTGCTGGAACCTGCTaGCTTTTCAGAGGACCTACT +
Preference number: 2 (lower is better)
Translates to: CYEAWRFRVLLNYETTEHPAGTC*LFRGPT
Trigger: AGTAGGTCCTCTGAAAAGGCAGCAGGTTCCAGCAGG...ATGTTCTGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCAGGCTTCATAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR GCA 90 bp AATCATGACCTGTGGCACAAAGCGGAATTTTTACAATATGTGCATGGAAAGCAACTACCTGCTGGAACCTaGTGCCTTTTCAGAGGACCT +
Preference number: 2 (lower is better)
Translates to: NHDLWHKAEFLQYVHGKQLPAGT*CLFRGP
Trigger: AGGTCCTCTGAAAAGGCAGCAGGTTCCAGCAGGTAG...TTGCTTTCCATGCACATATTGTAAAAATTCCGCTTTGTGCCACAGGTCATGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR GCA 90 bp AAATGTGGCTGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGCTCAGCTCAGCTACCTaGTGGAACCTGCTGCCTTTT +
Preference number: 2 (lower is better)
Translates to: KCGCIEKTANSSNVCATKLSSAT*WNLLPF
Trigger: AAAAGGCAGCAGGTTCCAGCAGGTAGCTGAGCTGAG...CTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCAGCCACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR GCA 90 bp ACTTTTGCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCATCTCTGCTAAATTCTaGTTGGGTGGGTGGAGGATT +
Preference number: 2 (lower is better)
Translates to: TFANASCFHVLTWILGQSISAKF*LGGWRI
Trigger: AATCCTCCACCCACCCAAGCAGAATTTAGCAGAGAT...GGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGCAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR GCA 90 bp ACTTTTGCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCAAATGGACAGTGGTGTaGTTCAAGCTACCACACACA +
Preference number: 2 (lower is better)
Translates to: TFANASCFHVLTWILGQSKWTVV*FKLPHT
Trigger: TGTGTGTGGTAGCTTGAAGCACACCACTGTCCATTT...GGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGCAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR GCA 90 bp TCCTTAAAGCTGTACACACATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTTCTGGGTTGCTGCCTaGAGCCACTATAGTAACATT +
Preference number: 2 (lower is better)
Translates to: SLKLYTHLLPSEFITDGPFWVAA*SHYSNI
Trigger: AATGTTACTATAGTGGCTGCAGGCAGCAACCCAGAA...GGGACCATCTGTGATAAATTCAGAAGGGAGGAGATGTGTGTACAGCTTTAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR GCA 90 bp TGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAGAACCACGAAACAGTTGGGGAACTaGTGTGGCTTCCATCAGCGT +
Preference number: 2 (lower is better)
Translates to: CIEKTANSSNVCATKRTTKQLGN*CGFHQR
Trigger: ACGCTGATGGAAGCCACAGCAGTTCCCCAACTGTTT...CGTGGTTCTCTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646519.1
3UTR-3UTR CCA 90 bp AATAGGATGCAGCTGGCACTGGCGGTAGCATTTTTATGTCAATTAATTAAAATTGATACGTGTGGGATGTaGCCCCCAGATACCACTGGG +
Preference number: 2 (lower is better)
Translates to: NRMQLALAVAFLCQLIKIDTCGM*PPDTTG
Trigger: CCCAGTGGTATCTGGGGGCCACATCCCACACGTATC...AATTTTAATTAATTGACATAAAAATGCTACCGCCAGTGCCAGCTGCATCCTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp TGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAGAACCACGTTGGGTAAGGCAGATTaGGGTTCCCCTGTTGTGTTG +
Preference number: 2 (lower is better)
Translates to: CIEKTANSSNVCATKRTTLGKAD*GSPVVL
Trigger: CAACACAACAGGGGAACCCCAATCTGCCTTACCCAA...CGTGGTTCTCTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp AATAGGATGCAGCTGGCACTGGCGGTAGCATTTTTATGTCAATTAATTAAAATTCTGCCAGTGGGGCCTTaGGTAAGGCAGATTGGGGTT +
Preference number: 2 (lower is better)
Translates to: NRMQLALAVAFLCQLIKILPVGP*VRQIGV
Trigger: AACCCCAATCTGCCTTACCCAAGGCCCCACTGGCAG...AATTTTAATTAATTGACATAAAAATGCTACCGCCAGTGCCAGCTGCATCCTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp AAATGTGGCTGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGTGTGACTGCCAGGAGTaGTCAAAGTGCATGCCACAG +
Preference number: 2 (lower is better)
Translates to: KCGCIEKTANSSNVCATKCDCQE*SKCMPQ
Trigger: CTGTGGCATGCACTTTGACCACTCCTGGCAGTCACA...CTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCAGCCACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp AAATGTGGCTGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGTCCTGCAATGCTGGGTaGCCTACAAAGGTGGGTTTG +
Preference number: 2 (lower is better)
Translates to: KCGCIEKTANSSNVCATKSCNAG*PTKVGL
Trigger: CAAACCCACCTTTGTAGGCCACCCAGCATTGCAGGA...CTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCAGCCACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp GCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCCACAATCATGACCTGTaGCACAAAGCGGAATTTTTA +
Preference number: 2 (lower is better)
Translates to: ANASCFHVLTWILGQSLSHNHDL*HKAEFL
Trigger: TAAAAATTCCGCTTTGTGCCACAGGTCATGATTGTG...GGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR CAA 90 bp GTGTTGTTTGGTAAGGCTGGTTGGTTAAGAATCTCTGGTGCAATTTaGCTCTCCTGTACTAGGTGTCTCATAATTGAACCCTCTATCCAC +
Preference number: 2 (lower is better)
Translates to: VLFGKAGWLRISGAI*LSCTRCLIIEPSIH
Trigger: GTGGATAGAGGGTTCAATTATGAGACACCTAGTACAGGAGAGCAAAATTGCACCAGAGATTCTTAACCAACCAGCCTTACCAAACAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp ATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTAATGGTGTGGACTTCTCTTGTGCGGCTTTTAGCTaGCTATGTCTTTGCTATGAA +
Preference number: 2 (lower is better)
Translates to: ISSLLNLSQMVPNGVDFSCAAFS*LCLCYE
Trigger: TTCATAGCAAAGACATAGTCAGCTAAAAGCCGCACA...AGAGAAGTCCACACCATTAGGGACCATCTGTGATAAATTCAGAAGGGAGGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp TCCTTAAAGCTGTACACACATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTGTGCGGCTTTTAGCTaGCTATGTCTTTGCTATGAA +
Preference number: 2 (lower is better)
Translates to: SLKLYTHLLPSEFITDGPCAAFS*LCLCYE
Trigger: TTCATAGCAAAGACATAGTCAGCTAAAAGCCGCACA...GGGACCATCTGTGATAAATTCAGAAGGGAGGAGATGTGTGTACAGCTTTAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp AATCATGACCTGTGGCACAAAGCGGAATTTTTACAATATGTGCATGGAAAGCAATGGAAATCTGCCATGTaGCTGCCAGGAGTGGTCAAA +
Preference number: 2 (lower is better)
Translates to: NHDLWHKAEFLQYVHGKQWKSAM*LPGVVK
Trigger: TTTGACCACTCCTGGCAGTCACATGGCAGATTTCCA...TTGCTTTCCATGCACATATTGTAAAAATTCCGCTTTGTGCCACAGGTCATGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp TCCTTAAAGCTGTACACACATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCGGTGGTGTCATTAGATaGTCCTTGTTTGGATTAAGG +
Preference number: 2 (lower is better)
Translates to: SLKLYTHLLPSEFITDGPGGVIR*SLFGLR
Trigger: CCTTAATCCAAACAAGGATCATCTAATGACACCACC...GGGACCATCTGTGATAAATTCAGAAGGGAGGAGATGTGTGTACAGCTTTAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp ACTTTTGCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCGGTGGTGTCATTAGATaGTCCTTGTTTGGATTAAGG +
Preference number: 2 (lower is better)
Translates to: TFANASCFHVLTWILGQSGGVIR*SLFGLR
Trigger: CCTTAATCCAAACAAGGATCATCTAATGACACCACC...GGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGCAAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR GCA 90 bp CTTTGCTTTGGTCTTGAAATCACAAATCAAACACATGACCCAGTGCAAATTAAGCCTGCTGGAACCTGCTaGCTTTTCAGAGGACCTACT +
Preference number: 2 (lower is better)
Translates to: LCFGLEITNQTHDPVQIKPAGTC*LFRGPT
Trigger: AGTAGGTCCTCTGAAAAGGCAGCAGGTTCCAGCAGG...CTTAATTTGCACTGGGTCATGTGTTTGATTTGTGATTTCAAGACCAAAGCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR GCA 90 bp ATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTAATGGTGTGGACTTCTCTCAGAGAGCCCTTTCCTaGTATTTGCTTGAGAAACAA +
Preference number: 2 (lower is better)
Translates to: ISSLLNLSQMVPNGVDFSQRALS*YLLEKQ
Trigger: TTGTTTCTCAAGCAAATAGCAGGAAAGGGCTCTCTG...AGAGAAGTCCACACCATTAGGGACCATCTGTGATAAATTCAGAAGGGAGGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646519.1
3UTR-3UTR GCA 90 bp CTTTGCTTTGGTCTTGAAATCACAAATCAAACACATGACCCAGTGCAAATTAAGAGAGATATGGAGTGCTaGTGGTCTGGAAGGGTCCAC +
Preference number: 2 (lower is better)
Translates to: LCFGLEITNQTHDPVQIKRDMEC*WSGRVH
Trigger: GTGGACCCTTCCAGACCAGCAGCACTCCATATCTCT...CTTAATTTGCACTGGGTCATGTGTTTGATTTGTGATTTCAAGACCAAAGCAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646519.1
3UTR-3UTR CCA 90 bp TGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAGAACCACGTTAGTGCACCTCAACTaGTTTTGTGAGCTGTCTGCG +
Preference number: 2 (lower is better)
Translates to: CIEKTANSSNVCATKRTTLVHLN*FCELSA
Trigger: CGCAGACAGCTCACAAAACCAGTTGAGGTGCACTAA...CGTGGTTCTCTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp CTTTGCTTTGGTCTTGAAATCACAAATCAAACACATGACCCAGTGCAAATTAAGAGCTCAGCTACCTGCTaGAACCTGCTGCCTTTTCAG +
Preference number: 2 (lower is better)
Translates to: LCFGLEITNQTHDPVQIKSSATC*NLLPFQ
Trigger: CTGAAAAGGCAGCAGGTTCCAGCAGGTAGCTGAGCT...CTTAATTTGCACTGGGTCATGTGTTTGATTTGTGATTTCAAGACCAAAGCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp AAATGTGGCTGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGTTCTGCTTGGGTGGGTaGAGGATTCCAATGAAGGGA +
Preference number: 2 (lower is better)
Translates to: KCGCIEKTANSSNVCATKFCLGG*RIPMKG
Trigger: TCCCTTCATTGGAATCCTCCACCCACCCAAGCAGAA...CTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCAGCCACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp AATCATGACCTGTGGCACAAAGCGGAATTTTTACAATATGTGCATGGAAAGCAATTCTGCTTGGGTGGGTaGAGGATTCCAATGAAGGGA +
Preference number: 2 (lower is better)
Translates to: NHDLWHKAEFLQYVHGKQFCLGG*RIPMKG
Trigger: TCCCTTCATTGGAATCCTCCACCCACCCAAGCAGAA...TTGCTTTCCATGCACATATTGTAAAAATTCCGCTTTGTGCCACAGGTCATGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp TCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCGGAATTGTTATCTAAGCATACTTaGTATACGGCCTTTAGAAGG +
Preference number: 2 (lower is better)
Translates to: SCFHVLTWILGQSLSSELLSKHT*YTAFRR
Trigger: CCTTCTAAAGGCCGTATACCAAGTATGCTTAGATAA...CAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTACACTTACAAATAAATaGACAGTGGTGTGCTTCAAG +
Preference number: 2 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPTLTNK*TVVCFK
Trigger: CTTGAAGCACACCACTGTCCATTTATTTGTAAGTGT...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp ACTTTTGCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCCAGGAACTAGTACATaGTTCCACAGTAGTAGTAAG +
Preference number: 2 (lower is better)
Translates to: TFANASCFHVLTWILGQSPGTST*FHSSSK
Trigger: CTTACTACTACTGTGGAACCATGTACTAGTTCCTGG...GGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGCAAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp TCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCGGAATTGGTGAGACAACTGAAATaGATAAAAATGTGGCTGCAT +
Preference number: 2 (lower is better)
Translates to: SCFHVLTWILGQSLSSELVRQLK*IKMWLH
Trigger: ATGCAGCCACATTTTTATCCATTTCAGTTGTCTCAC...CAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp TCCTTAAAGCTGTACACACATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCCTAAAACCAAAGCTGTaGTACCTGTTCTGGAACTCT +
Preference number: 2 (lower is better)
Translates to: SLKLYTHLLPSEFITDGPLKPKL*YLFWNS
Trigger: AGAGTTCCAGAACAGGTACCACAGCTTTGGTTTTAG...GGGACCATCTGTGATAAATTCAGAAGGGAGGAGATGTGTGTACAGCTTTAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR CAA 90 bp CTAATCGATATACATATATATGCACTCTCTCTATATATGTATATATaGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGC +
Preference number: 2 (lower is better)
Translates to: LIDIHIYALSLYMYI*IRVGCGPQIPLGHC
Trigger: GCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATGTATATCGATTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR CAA 90 bp TTTCCTGCTATTTGCTTGAGAAACAAAGCCTTCCCTCCTCCCAAGTaGAAAGAAATAAAGGAGTCTGAACTAATCAAAACCCGCAAGCCT +
Preference number: 2 (lower is better)
Translates to: FPAICLRNKAFPPPK*KEIKESELIKTRKP
Trigger: AGGCTTGCGGGTTTTGATTAGTTCAGACTCCTTTATTTCTTTCAACTTGGGAGGAGGGAAGGCTTTGTTTCTCAAGCAAATAGCAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000646519.1
3UTR-3UTR TCA 90 bp ACTTTTGCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCAAGAGTTATTCTGAATaGTGGTACTGTGATGGAAGC +
Preference number: 2 (lower is better)
Translates to: TFANASCFHVLTWILGQSKSYSE*WYCDGS
Trigger: GCTTCCATCACAGTACCATCATTCAGAATAACTCTT...GGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGCAAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp GCTTATTTATCTAAGCATACTTGGTATACGGCCTTTAGAAGGCAAAGTGTTTTGGGGGCCGTTAGGGTTTaGAGGCAAATCTCTGCTAAA +
Preference number: 2 (lower is better)
Translates to: AYLSKHTWYTAFRRQSVLGAVRV*RQISAK
Trigger: TTTAGCAGAGATTTGCCTTCAAACCCTAACGGCCCC...CAAAACACTTTGCCTTCTAAAGGCCGTATACCAAGTATGCTTAGATAAATAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp TCCTTAAAGCTGTACACACATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCCCTGTTCTGGAACTCTaGTATGGGTTAAAATTTGTG +
Preference number: 2 (lower is better)
Translates to: SLKLYTHLLPSEFITDGPPVLEL*YGLKFV
Trigger: CACAAATTTTAACCCATATCAGAGTTCCAGAACAGG...GGGACCATCTGTGATAAATTCAGAAGGGAGGAGATGTGTGTACAGCTTTAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp CTTTGCTTTGGTCTTGAAATCACAAATCAAACACATGACCCAGTGCAAATTAAGGCAAGTGAGAGGCAGTaGGACCGTCTAAAGAGCAAA +
Preference number: 2 (lower is better)
Translates to: LCFGLEITNQTHDPVQIKASERQ*DRLKSK
Trigger: TTTGCTCTTTAGACGGTCTCACTGCCTCTCACTTGC...CTTAATTTGCACTGGGTCATGTGTTTGATTTGTGATTTCAAGACCAAAGCAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp AATAGGATGCAGCTGGCACTGGCGGTAGCATTTTTATGTCAATTAATTAAAATTCTGCTGCAGAAAATGTaGGGCACTAGGACCAGAGAG +
Preference number: 2 (lower is better)
Translates to: NRMQLALAVAFLCQLIKILLQKM*GTRTRE
Trigger: CTCTCTGGTCCTAGTGCCTCACATTTTCTGCAGCAG...AATTTTAATTAATTGACATAAAAATGCTACCGCCAGTGCCAGCTGCATCCTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000646519.1
3UTR-3UTR GCA 90 bp AATAGGATGCAGCTGGCACTGGCGGTAGCATTTTTATGTCAATTAATTAAAATTCTACCTGCTGGAACCTaGTGCCTTTTCAGAGGACCT +
Preference number: 2 (lower is better)
Translates to: NRMQLALAVAFLCQLIKILPAGT*CLFRGP
Trigger: AGGTCCTCTGAAAAGGCAGCAGGTTCCAGCAGGTAG...AATTTTAATTAATTGACATAAAAATGCTACCGCCAGTGCCAGCTGCATCCTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR GCA 90 bp AATCATGACCTGTGGCACAAAGCGGAATTTTTACAATATGTGCATGGAAAGCAATGGGAGTCCATCTGCTaGAGAAAATGTGAGGCACTA +
Preference number: 2 (lower is better)
Translates to: NHDLWHKAEFLQYVHGKQWESIC*RKCEAL
Trigger: TAGTGCCTCACATTTTCTGCAGCAGATGGACTCCCA...TTGCTTTCCATGCACATATTGTAAAAATTCCGCTTTGTGCCACAGGTCATGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646519.1
3UTR-3UTR GCA 90 bp CTTTGCTTTGGTCTTGAAATCACAAATCAAACACATGACCCAGTGCAAATTAAGGATTTAATAGCGTGCTaGCATTCGAGGTGGTGGTGC +
Preference number: 2 (lower is better)
Translates to: LCFGLEITNQTHDPVQIKDLIAC*HSRWWC
Trigger: GCACCACCACCTCGAATGGCAGCACGCTATTAAATC...CTTAATTTGCACTGGGTCATGTGTTTGATTTGTGATTTCAAGACCAAAGCAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646519.1
3UTR-3UTR CCA 90 bp TGCTATGAAGCCTGGCGATTTAGAGTTTTGCTTAACTATGAAACCACAGAACATTTAGTGCACCTCAACTaGTTTTGTGAGCTGTCTGCG +
Preference number: 2 (lower is better)
Translates to: CYEAWRFRVLLNYETTEHLVHLN*FCELSA
Trigger: CGCAGACAGCTCACAAAACCAGTTGAGGTGCACTAA...ATGTTCTGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCAGGCTTCATAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp TCCTTAAAGCTGTACACACATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCCTTTGCTATGAAGCCTaGCGATTTAGAGTTTTGCTT +
Preference number: 2 (lower is better)
Translates to: SLKLYTHLLPSEFITDGPLCYEA*RFRVLL
Trigger: AAGCAAAACTCTAAATCGCCAGGCTTCATAGCAAAG...GGGACCATCTGTGATAAATTCAGAAGGGAGGAGATGTGTGTACAGCTTTAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp AATAGGATGCAGCTGGCACTGGCGGTAGCATTTTTATGTCAATTAATTAAAATTAGCTCAGCTACCTGCTaGAACCTGCTGCCTTTTCAG +
Preference number: 2 (lower is better)
Translates to: NRMQLALAVAFLCQLIKISSATC*NLLPFQ
Trigger: CTGAAAAGGCAGCAGGTTCCAGCAGGTAGCTGAGCT...AATTTTAATTAATTGACATAAAAATGCTACCGCCAGTGCCAGCTGCATCCTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp AATAGGATGCAGCTGGCACTGGCGGTAGCATTTTTATGTCAATTAATTAAAATTTGTGACTGCCAGGAGTaGTCAAAGTGCATGCCACAG +
Preference number: 2 (lower is better)
Translates to: NRMQLALAVAFLCQLIKICDCQE*SKCMPQ
Trigger: CTGTGGCATGCACTTTGACCACTCCTGGCAGTCACA...AATTTTAATTAATTGACATAAAAATGCTACCGCCAGTGCCAGCTGCATCCTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp AATAGGATGCAGCTGGCACTGGCGGTAGCATTTTTATGTCAATTAATTAAAATTTCCTGCAATGCTGGGTaGCCTACAAAGGTGGGTTTG +
Preference number: 2 (lower is better)
Translates to: NRMQLALAVAFLCQLIKISCNAG*PTKVGL
Trigger: CAAACCCACCTTTGTAGGCCACCCAGCATTGCAGGA...AATTTTAATTAATTGACATAAAAATGCTACCGCCAGTGCCAGCTGCATCCTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp AAATGTGGCTGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGATTTTGAAAGGGCTCTaGCAAGTGAGAGGCAGTGAG +
Preference number: 2 (lower is better)
Translates to: KCGCIEKTANSSNVCATKILKGL*QVRGSE
Trigger: CTCACTGCCTCTCACTTGCCAGAGCCCTTTCAAAAT...CTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCAGCCACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp ACTTTTGCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCACAATCATGACCTGTaGCACAAAGCGGAATTTTTA +
Preference number: 2 (lower is better)
Translates to: TFANASCFHVLTWILGQSHNHDL*HKAEFL
Trigger: TAAAAATTCCGCTTTGTGCCACAGGTCATGATTGTG...GGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGCAAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp ATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTAATGGTGTGGACTTCTCTTATATATGTATATATTaGTACGTGTGGGATGTGGCC +
Preference number: 2 (lower is better)
Translates to: ISSLLNLSQMVPNGVDFSYICIY*YVWDVA
Trigger: GGCCACATCCCACACGTATCAATATATACATATATA...AGAGAAGTCCACACCATTAGGGACCATCTGTGATAAATTCAGAAGGGAGGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp CTTTGCTTTGGTCTTGAAATCACAAATCAAACACATGACCCAGTGCAAATTAAGGACCTGCAGCATGTCTaGAAGCAGAAATTGGAAGAG +
Preference number: 2 (lower is better)
Translates to: LCFGLEITNQTHDPVQIKDLQHV*KQKLEE
Trigger: CTCTTCCAATTTCTGCTTTCAGACATGCTGCAGGTC...CTTAATTTGCACTGGGTCATGTGTTTGATTTGTGATTTCAAGACCAAAGCAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp TGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAGAACCACGTGTGCGGCTTTTAGCTaGCTATGTCTTTGCTATGAA +
Preference number: 2 (lower is better)
Translates to: CIEKTANSSNVCATKRTTCAAFS*LCLCYE
Trigger: TTCATAGCAAAGACATAGTCAGCTAAAAGCCGCACA...CGTGGTTCTCTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp AATAGGATGCAGCTGGCACTGGCGGTAGCATTTTTATGTCAATTAATTAAAATTGCAAGTGAGAGGCAGTaGGACCGTCTAAAGAGCAAA +
Preference number: 2 (lower is better)
Translates to: NRMQLALAVAFLCQLIKIASERQ*DRLKSK
Trigger: TTTGCTCTTTAGACGGTCTCACTGCCTCTCACTTGC...AATTTTAATTAATTGACATAAAAATGCTACCGCCAGTGCCAGCTGCATCCTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR GCA 90 bp TGCTATGAAGCCTGGCGATTTAGAGTTTTGCTTAACTATGAAACCACAGAACATTCTCTGGTGCAATTTTaGTCTCCTGTACTAGGTGTC +
Preference number: 2 (lower is better)
Translates to: CYEAWRFRVLLNYETTEHSLVQF*SPVLGV
Trigger: GACACCTAGTACAGGAGAGCAAAATTGCACCAGAGA...ATGTTCTGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCAGGCTTCATAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR GCA 90 bp AATAGGATGCAGCTGGCACTGGCGGTAGCATTTTTATGTCAATTAATTAAAATTAATCTGCCATGTGACTaGCAGGAGTGGTCAAAGTGC +
Preference number: 2 (lower is better)
Translates to: NRMQLALAVAFLCQLIKINLPCD*QEWSKC
Trigger: GCACTTTGACCACTCCTGGCAGTCACATGGCAGATT...AATTTTAATTAATTGACATAAAAATGCTACCGCCAGTGCCAGCTGCATCCTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR GCA 90 bp AAATGTGGCTGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGATCTCTGCTAAATTCTaGTTGGGTGGGTGGAGGATT +
Preference number: 2 (lower is better)
Translates to: KCGCIEKTANSSNVCATKISAKF*LGGWRI
Trigger: AATCCTCCACCCACCCAAGCAGAATTTAGCAGAGAT...CTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCAGCCACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp AATAGGATGCAGCTGGCACTGGCGGTAGCATTTTTATGTCAATTAATTAAAATTTTCTGCTTGGGTGGGTaGAGGATTCCAATGAAGGGA +
Preference number: 2 (lower is better)
Translates to: NRMQLALAVAFLCQLIKIFCLGG*RIPMKG
Trigger: TCCCTTCATTGGAATCCTCCACCCACCCAAGCAGAA...AATTTTAATTAATTGACATAAAAATGCTACCGCCAGTGCCAGCTGCATCCTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp TCCTTAAAGCTGTACACACATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTTATCTAAGCATACTTaGTATACGGCCTTTAGAAGG +
Preference number: 2 (lower is better)
Translates to: SLKLYTHLLPSEFITDGPLSKHT*YTAFRR
Trigger: CCTTCTAAAGGCCGTATACCAAGTATGCTTAGATAA...GGGACCATCTGTGATAAATTCAGAAGGGAGGAGATGTGTGTACAGCTTTAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp TGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAGAACCACGCAAATAAATGGACAGTaGTGTGCTTCAAGCTACCAC +
Preference number: 2 (lower is better)
Translates to: CIEKTANSSNVCATKRTTQINGQ*CASSYH
Trigger: GTGGTAGCTTGAAGCACACCACTGTCCATTTATTTG...CGTGGTTCTCTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp ACTTTTGCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCACACTTACAAATAAATaGACAGTGGTGTGCTTCAAG +
Preference number: 2 (lower is better)
Translates to: TFANASCFHVLTWILGQSTLTNK*TVVCFK
Trigger: CTTGAAGCACACCACTGTCCATTTATTTGTAAGTGT...GGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGCAAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp TGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAGAACCACGAAGAGTTATTCTGAATaGTGGTACTGTGATGGAAGC +
Preference number: 2 (lower is better)
Translates to: CIEKTANSSNVCATKRTTKSYSE*WYCDGS
Trigger: GCTTCCATCACAGTACCATCATTCAGAATAACTCTT...CGTGGTTCTCTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp AATAGGATGCAGCTGGCACTGGCGGTAGCATTTTTATGTCAATTAATTAAAATTCTACAAAGGTGGGTTTaGGAAGGACCAGAGAACAAG +
Preference number: 2 (lower is better)
Translates to: NRMQLALAVAFLCQLIKILQRWV*EGPENK
Trigger: CTTGTTCTCTGGTCCTTCTCAAACCCACCTTTGTAG...AATTTTAATTAATTGACATAAAAATGCTACCGCCAGTGCCAGCTGCATCCTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp TGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAGAACCACGCTTTGCTATGAAGCCTaGCGATTTAGAGTTTTGCTT +
Preference number: 2 (lower is better)
Translates to: CIEKTANSSNVCATKRTTLCYEA*RFRVLL
Trigger: AAGCAAAACTCTAAATCGCCAGGCTTCATAGCAAAG...CGTGGTTCTCTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp AAATGTGGCTGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGCAAATAAATGGACAGTaGTGTGCTTCAAGCTACCAC +
Preference number: 2 (lower is better)
Translates to: KCGCIEKTANSSNVCATKQINGQ*CASSYH
Trigger: GTGGTAGCTTGAAGCACACCACTGTCCATTTATTTG...CTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCAGCCACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp ATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTAATGGTGTGGACTTCTCTTCTGGAACTCTGATATaGGTTAAAATTTGTGAGACA +
Preference number: 2 (lower is better)
Translates to: ISSLLNLSQMVPNGVDFSSGTLI*VKICET
Trigger: TGTCTCACAAATTTTAACCCATATCAGAGTTCCAGA...AGAGAAGTCCACACCATTAGGGACCATCTGTGATAAATTCAGAAGGGAGGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp ACTTTTGCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCATGGAAAGCAATTCTTaGGCAATAGCAATTGGAAAA +
Preference number: 2 (lower is better)
Translates to: TFANASCFHVLTWILGQSMESNS*AIAIGK
Trigger: TTTTCCAATTGCTATTGCCCAAGAATTGCTTTCCAT...GGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGCAAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp ACTTTTGCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCTTTACAATATGTGCATaGAAAGCAATTCTTGGGCAA +
Preference number: 2 (lower is better)
Translates to: TFANASCFHVLTWILGQSFTICA*KAILGQ
Trigger: TTGCCCAAGAATTGCTTTCCATGCACATATTGTAAA...GGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGCAAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR CAA 90 bp ATCTTAAATAGTAAACAATCTGAAGCTCGATTGCAATTGTCTCTCTaGAGCCTTCTGCTTCTCAATATCTACCCTCTTATGGCTGCAAGA +
Preference number: 2 (lower is better)
Translates to: ILNSKQSEARLQLSL*SLLLLNIYPLMAAR
Trigger: TCTTGCAGCCATAAGAGGGTAGATATTGAGAAGCAGAAGGCTCAAGAGAGACAATTGCAATCGAGCTTCAGATTGTTTACTATTTAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp AATCATGACCTGTGGCACAAAGCGGAATTTTTACAATATGTGCATGGAAAGCAAAAAATGTGGCTGCATTaGAAAGACTGCAAATTCCAG +
Preference number: 2 (lower is better)
Translates to: NHDLWHKAEFLQYVHGKQKMWLH*KDCKFQ
Trigger: CTGGAATTTGCAGTCTTTTCAATGCAGCCACATTTT...TTGCTTTCCATGCACATATTGTAAAAATTCCGCTTTGTGCCACAGGTCATGATT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR GCA 90 bp AAATGTGGCTGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGTTCTGCTCCTCTAAATaGAAATTCTGTGGAAAGCTG +
Preference number: 2 (lower is better)
Translates to: KCGCIEKTANSSNVCATKFCSSK*KFCGKL
Trigger: CAGCTTTCCACAGAATTTGCATTTAGAGGAGCAGAA...CTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCAGCCACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp AAATGTGGCTGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGCTTTGCTATGAAGCCTaGCGATTTAGAGTTTTGCTT +
Preference number: 2 (lower is better)
Translates to: KCGCIEKTANSSNVCATKLCYEA*RFRVLL
Trigger: AAGCAAAACTCTAAATCGCCAGGCTTCATAGCAAAG...CTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCAGCCACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR CAA 90 bp TTATCTAAGCATACTTGGTATACGGCCTTTAGAAGGCAAAGTGTTTaGCTTTCCCATCCATTTTTATTAGAAGGAGTCAGGATGAATTCC +
Preference number: 2 (lower is better)
Translates to: LSKHTWYTAFRRQSV*LSHPFLLEGVRMNS
Trigger: GGAATTCATCCTGACTCCTTCTAATAAAAATGGATGGGAAAGCAAAACACTTTGCCTTCTAAAGGCCGTATACCAAGTATGCTTAGATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp AATCATGACCTGTGGCACAAAGCGGAATTTTTACAATATGTGCATGGAAAGCAATATATATGTATATATTaGTACGTGTGGGATGTGGCC +
Preference number: 2 (lower is better)
Translates to: NHDLWHKAEFLQYVHGKQYICIY*YVWDVA
Trigger: GGCCACATCCCACACGTATCAATATATACATATATA...TTGCTTTCCATGCACATATTGTAAAAATTCCGCTTTGTGCCACAGGTCATGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp AAATGTGGCTGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGTATATATGTATATATTaGTACGTGTGGGATGTGGCC +
Preference number: 2 (lower is better)
Translates to: KCGCIEKTANSSNVCATKYICIY*YVWDVA
Trigger: GGCCACATCCCACACGTATCAATATATACATATATA...CTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCAGCCACATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR GCA 90 bp GCTTATTTATCTAAGCATACTTGGTATACGGCCTTTAGAAGGCAAAGTGTTTTGGTTAAGAATCTCTGGTaGAATTTTGCTCTCCTGTAC +
Preference number: 2 (lower is better)
Translates to: AYLSKHTWYTAFRRQSVLVKNLW*NFALLY
Trigger: GTACAGGAGAGCAAAATTGCACCAGAGATTCTTAAC...CAAAACACTTTGCCTTCTAAAGGCCGTATACCAAGTATGCTTAGATAAATAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR GCA 90 bp AAATGTGGCTGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGTTTGGATTAAGGATTTaGACTTGGAAATCTGCCATG +
Preference number: 2 (lower is better)
Translates to: KCGCIEKTANSSNVCATKFGLRI*TWKSAM
Trigger: CATGGCAGATTTCCAAGTGCAAATCCTTAATCCAAA...CTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCAGCCACATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp AATAGGATGCAGCTGGCACTGGCGGTAGCATTTTTATGTCAATTAATTAAAATTTTTGGTAAGGCTGGTTaGTTAAGAATCTCTGGTGCA +
Preference number: 2 (lower is better)
Translates to: NRMQLALAVAFLCQLIKIFGKAG*LRISGA
Trigger: TGCACCAGAGATTCTTAACCAACCAGCCTTACCAAA...AATTTTAATTAATTGACATAAAAATGCTACCGCCAGTGCCAGCTGCATCCTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp AAATGTGGCTGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGTTATCTAAGCATACTTaGTATACGGCCTTTAGAAGG +
Preference number: 2 (lower is better)
Translates to: KCGCIEKTANSSNVCATKLSKHT*YTAFRR
Trigger: CCTTCTAAAGGCCGTATACCAAGTATGCTTAGATAA...CTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCAGCCACATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp AATAGGATGCAGCTGGCACTGGCGGTAGCATTTTTATGTCAATTAATTAAAATTCCAGGAACTAGTACATaGTTCCACAGTAGTAGTAAG +
Preference number: 2 (lower is better)
Translates to: NRMQLALAVAFLCQLIKIPGTST*FHSSSK
Trigger: CTTACTACTACTGTGGAACCATGTACTAGTTCCTGG...AATTTTAATTAATTGACATAAAAATGCTACCGCCAGTGCCAGCTGCATCCTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp AAATGTGGCTGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGGTGAGACAACTGAAATaGATAAAAATGTGGCTGCAT +
Preference number: 2 (lower is better)
Translates to: KCGCIEKTANSSNVCATKVRQLK*IKMWLH
Trigger: ATGCAGCCACATTTTTATCCATTTCAGTTGTCTCAC...CTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCAGCCACATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp AAATTAGAAAACCACATCACTCCAGCATTTCATGCTGATAAAGGGCTAAAGGTTTGTGCCTGGATGAACTaGAATTGCTTAGCAATATTT +
Preference number: 2 (lower is better)
Translates to: KLENHITPAFHADKGLKVCAWMN*NCLAIF
Trigger: AAATATTGCTAAGCAATTTCAGTTCATCCAGGCACA...AACCTTTAGCCCTTTATCAGCATGAAATGCTGGAGTGATGTGGTTTTCTAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp CTTTGCTTTGGTCTTGAAATCACAAATCAAACACATGACCCAGTGCAAATTAAGTGTGCCTGGATGAACTaGAATTGCTTAGCAATATTT +
Preference number: 2 (lower is better)
Translates to: LCFGLEITNQTHDPVQIKCAWMN*NCLAIF
Trigger: AAATATTGCTAAGCAATTTCAGTTCATCCAGGCACA...CTTAATTTGCACTGGGTCATGTGTTTGATTTGTGATTTCAAGACCAAAGCAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR TCA 90 bp AATAGGATGCAGCTGGCACTGGCGGTAGCATTTTTATGTCAATTAATTAAAATTAAAATGTGGCTGCATTaGAAAGACTGCAAATTCCAG +
Preference number: 2 (lower is better)
Translates to: NRMQLALAVAFLCQLIKIKMWLH*KDCKFQ
Trigger: CTGGAATTTGCAGTCTTTTCAATGCAGCCACATTTT...AATTTTAATTAATTGACATAAAAATGCTACCGCCAGTGCCAGCTGCATCCTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR GCA 90 bp CTTTGCTTTGGTCTTGAAATCACAAATCAAACACATGACCCAGTGCAAATTAAGTTTGGATTAAGGATTTaGACTTGGAAATCTGCCATG +
Preference number: 2 (lower is better)
Translates to: LCFGLEITNQTHDPVQIKFGLRI*TWKSAM
Trigger: CATGGCAGATTTCCAAGTGCAAATCCTTAATCCAAA...CTTAATTTGCACTGGGTCATGTGTTTGATTTGTGATTTCAAGACCAAAGCAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR GCA 90 bp GCTTATTTATCTAAGCATACTTGGTATACGGCCTTTAGAAGGCAAAGTGTTTTGTTTGGATTAAGGATTTaGACTTGGAAATCTGCCATG +
Preference number: 2 (lower is better)
Translates to: AYLSKHTWYTAFRRQSVLFGLRI*TWKSAM
Trigger: CATGGCAGATTTCCAAGTGCAAATCCTTAATCCAAA...CAAAACACTTTGCCTTCTAAAGGCCGTATACCAAGTATGCTTAGATAAATAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR GCA 90 bp AATCATGACCTGTGGCACAAAGCGGAATTTTTACAATATGTGCATGGAAAGCAAGTAGTAGTAAGACTTTaGTTTGGTCTTGAAATCACA +
Preference number: 2 (lower is better)
Translates to: NHDLWHKAEFLQYVHGKQVVVRL*FGLEIT
Trigger: TGTGATTTCAAGACCAAAGCAAAGTCTTACTACTAC...TTGCTTTCCATGCACATATTGTAAAAATTCCGCTTTGTGCCACAGGTCATGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp AATAGGATGCAGCTGGCACTGGCGGTAGCATTTTTATGTCAATTAATTAAAATTCTTTGCTATGAAGCCTaGCGATTTAGAGTTTTGCTT +
Preference number: 2 (lower is better)
Translates to: NRMQLALAVAFLCQLIKILCYEA*RFRVLL
Trigger: AAGCAAAACTCTAAATCGCCAGGCTTCATAGCAAAG...AATTTTAATTAATTGACATAAAAATGCTACCGCCAGTGCCAGCTGCATCCTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp AATCATGACCTGTGGCACAAAGCGGAATTTTTACAATATGTGCATGGAAAGCAATTTACAATATGTGCATaGAAAGCAATTCTTGGGCAA +
Preference number: 2 (lower is better)
Translates to: NHDLWHKAEFLQYVHGKQFTICA*KAILGQ
Trigger: TTGCCCAAGAATTGCTTTCCATGCACATATTGTAAA...TTGCTTTCCATGCACATATTGTAAAAATTCCGCTTTGTGCCACAGGTCATGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR GCA 90 bp CTTTGCTTTGGTCTTGAAATCACAAATCAAACACATGACCCAGTGCAAATTAAGGTAGTAGTAAGACTTTaGTTTGGTCTTGAAATCACA +
Preference number: 2 (lower is better)
Translates to: LCFGLEITNQTHDPVQIKVVVRL*FGLEIT
Trigger: TGTGATTTCAAGACCAAAGCAAAGTCTTACTACTAC...CTTAATTTGCACTGGGTCATGTGTTTGATTTGTGATTTCAAGACCAAAGCAAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CCA 90 bp AATAGGATGCAGCTGGCACTGGCGGTAGCATTTTTATGTCAATTAATTAAAATTACACTTACAAATAAATaGACAGTGGTGTGCTTCAAG +
Preference number: 2 (lower is better)
Translates to: NRMQLALAVAFLCQLIKITLTNK*TVVCFK
Trigger: CTTGAAGCACACCACTGTCCATTTATTTGTAAGTGT...AATTTTAATTAATTGACATAAAAATGCTACCGCCAGTGCCAGCTGCATCCTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR GCA 72 bp TACCCGCGTCCACGGTGCCCTCCTCCCTGCCCGCAGTaGTGGGGCGCGGGGCGCGGCTCCTTTCCGGGCCCT +
Preference number: 3 (lower is better)
Translates to: YPRPRCPPPCPQ*WGAGRGSFPGP
Trigger: AGGGCCCGGAAAGGAGCCGCGCCCCGCGCCCCAGCACTGCGGGCAGGGAGGAGGGCACCGTGGACGCGGGTA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478660.6
3UTR GCA 72 bp GGACGGGCGGCGGCCGCTCCTTGTCATCCCCGCGTGTaGTGGGAGAGATGGTCGAAGGGCAACCGGGGAGCC +
Preference number: 3 (lower is better)
Translates to: GRAAAAPCHPRV*WERWSKGNRGA
Trigger: GGCTCCCCGGTTGCCCTTCGACCATCTCTCCCAGCACACGCGGGGATGACAAGGAGCGGCCGCCGCCCGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478660.6
3UTR CCA 72 bp TTCATGGTCCGCAGCTCCACCAGGATGTCCCCGACGTaGGCCTCCAAGCTCGCCGCAGCGGCGGGCCGGGCT +
Preference number: 3 (lower is better)
Translates to: FMVRSSTRMSPT*ASKLAAAAGRA
Trigger: AGCCCGGCCCGCCGCTGCGGCGAGCTTGGAGGCCCACGTCGGGGACATCCTGGTGGAGCTGCGGACCATGAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478660.6
3UTR GCA 72 bp CGCAGAGCAACCGCTCCTCCGCTGGGCGCGCTTCGCTaGTGGGGAGGGACAGGCAGGGATGCCTGGTGCAAG +
Preference number: 3 (lower is better)
Translates to: RRATAPPLGALR*WGGTGRDAWCK
Trigger: CTTGCACCAGGCATCCCTGCCTGTCCCTCCCCAGCAGCGAAGCGCGCCCAGCGGAGGAGCGGTTGCTCTGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
3UTR CCA 72 bp CGGGCGGCGGCCGCTCCTTGTCATCCCCGCGTGTGCTaGGAGAGATGGTCGAAGGGCAACCGGGGAGCCAGT +
Preference number: 3 (lower is better)
Translates to: RAAAAPCHPRVC*ERWSKGNRGAS
Trigger: ACTGGCTCCCCGGTTGCCCTTCGACCATCTCTCCCAGCACACGCGGGGATGACAAGGAGCGGCCGCCGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478660.6
3UTR CCA 72 bp AGAGCAACCGCTCCTCCGCTGGGCGCGCTTCGCTGCTaGGGAGGGACAGGCAGGGATGCCTGGTGCAAGCGA +
Preference number: 3 (lower is better)
Translates to: RATAPPLGALRC*GGTGRDAWCKR
Trigger: TCGCTTGCACCAGGCATCCCTGCCTGTCCCTCCCCAGCAGCGAAGCGCGCCCAGCGGAGGAGCGGTTGCTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
3UTR GCA 72 bp GCTGAAACGCTAGGGCCGTGCTTTCCGCTAGGCAGCTaGGCAGAGCAACCGCTCCTCCGCTGGGCGCGCTTC +
Preference number: 3 (lower is better)
Translates to: AETLGPCFPLGS*AEQPLLRWARF
Trigger: GAAGCGCGCCCAGCGGAGGAGCGGTTGCTCTGCGCAGCTGCCTAGCGGAAAGCACGGCCCTAGCGTTTCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576263.5
3UTR CCA 72 bp GCCGCTCCTTGTCATCCCCGCGTGTGCTGGGAGAGATaGTCGAAGGGCAACCGGGGAGCCAGTCGACCAGAC +
Preference number: 3 (lower is better)
Translates to: AAPCHPRVCWER*SKGNRGASRPD
Trigger: GTCTGGTCGACTGGCTCCCCGGTTGCCCTTCGACCATCTCTCCCAGCACACGCGGGGATGACAAGGAGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478660.6
3UTR CCA 72 bp GCCAGTTTGGTGAGGGCCCGCGCTATGCTGTCCAGGTaGCCGTTCATGGTCCGCAGCTCCACCAGGATGTCC +
Preference number: 3 (lower is better)
Translates to: ASLVRARAMLSR*PFMVRSSTRMS
Trigger: GGACATCCTGGTGGAGCTGCGGACCATGAACGGCCACCTGGACAGCATAGCGCGGGCCCTCACCAAACTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478660.6
3UTR GCA 72 bp CAACCGGGTCTGTTTCACGCTGAAACGCTAGGGCCGTaGTTTCCGCTAGGCAGCTGCGCAGAGCAACCGCTC +
Preference number: 3 (lower is better)
Translates to: QPGLFHAETLGP*FPLGSCAEQPL
Trigger: GAGCGGTTGCTCTGCGCAGCTGCCTAGCGGAAAGCACGGCCCTAGCGTTTCAGCGTGAAACAGACCCGGTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576263.5
3UTR CCA 72 bp TGGAGGGGCCTGGCTCCTCCGAGGAGAGGAACAAGGTaGTCGAAGACTGGGAGTCCAAGGTACTGGGCTCTG +
Preference number: 3 (lower is better)
Translates to: WRGLAPPRRGTR*SKTGSPRYWAL
Trigger: CAGAGCCCAGTACCTTGGACTCCCAGTCTTCGACCACCTTGTTCCTCTCCTCGGAGGAGCCAGGCCCCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478660.6
3UTR-3UTR CAA 90 bp GGCGGCGGCCGCTCCTTGTCATCCCCGCGTGTGCTGGGAGAGATGGTCGAAGGGGCCCTTTCCTGCTATTaGCTTGAGAAACAAAGCCTT +
Preference number: 3 (lower is better)
Translates to: GGGRSLSSPRVLGEMVEGALSCY*LEKQSL
Trigger: AAGGCTTTGTTTCTCAAGCAAATAGCAGGAAAGGGC...CCCTTCGACCATCTCTCCCAGCACACGCGGGGATGACAAGGAGCGGCCGCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478660.6
3UTR TCA 72 bp GTAGTGAGTGGTGGCGGACATACCGAGGGACATGCCTaGGGTGACTGGCGGGGTGTAAGTAAAGGTGGCTGG +
Preference number: 3 (lower is better)
Translates to: VVSGGGHTEGHA*GDWRGVSKGGW
Trigger: CCAGCCACCTTTACTTACACCCCGCCAGTCACCTCAGGCATGTCCCTCGGTATGTCCGCCACCACTCACTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483377.5
ENST00000646519.1
3UTR GCA 72 bp CAGGAAGCACAGGTCCAGCTGCCCCACACGCTGTCCTaGAATGCTGGGTGGCCTACAAAGGTGGGTTTGAGA +
Preference number: 3 (lower is better)
Translates to: QEAQVQLPHTLS*NAGWPTKVGLR
Trigger: TCTCAAACCCACCTTTGTAGGCCACCCAGCATTGCAGGACAGCGTGTGGGGCAGCTGGACCTGTGCTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR CCA 72 bp GGCTCCTCCGAGGAGAGGAACAAGGTGGTCGAAGACTaGGAGTCCAAGGTACTGGGCTCTGAATCCCCATGG +
Preference number: 3 (lower is better)
Translates to: GSSEERNKVVED*ESKVLGSESPW
Trigger: CCATGGGGATTCAGAGCCCAGTACCTTGGACTCCCAGTCTTCGACCACCTTGTTCCTCTCCTCGGAGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478660.6
3UTR CCA 72 bp TGTGAACGTCACCAGAGATGGATGCCCCACCAACGCTaGAGCTGGCCTCGCTGCTGCTTTGGCGACTTGCTT +
Preference number: 3 (lower is better)
Translates to: CERHQRWMPHQR*SWPRCCFGDLL
Trigger: AAGCAAGTCGCCAAAGCAGCAGCGAGGCCAGCTCCAGCGTTGGTGGGGCATCCATCTCTGGTGACGTTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576263.5
3UTR-3UTR CAA 90 bp CTAGGGCCGTGCTTTCCGCTAGGCAGCTGCGCAGAGCAACCGCTCCTCCGCTGGTTTCCTGCTATTTGCTaGAGAAACAAAGCCTTCCCT +
Preference number: 3 (lower is better)
Translates to: LGPCFPLGSCAEQPLLRWFPAIC*RNKAFP
Trigger: AGGGAAGGCTTTGTTTCTCAAGCAAATAGCAGGAAA...CCAGCGGAGGAGCGGTTGCTCTGCGCAGCTGCCTAGCGGAAAGCACGGCCCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478660.6
3UTR TCA 72 bp CTGCGGAGGGCACTGGTCCATACACAGCTGCCACCGTaGGGGTGTGAAGTTTCAAAGCACAGAGAGGAAGCG +
Preference number: 3 (lower is better)
Translates to: LRRALVHTQLPP*GCEVSKHREEA
Trigger: CGCTTCCTCTCTGTGCTTTGAAACTTCACACCCTCACGGTGGCAGCTGTGTATGGACCAGTGCCCTCCGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR TCA 72 bp CCCTCCACGCCACGCGGAAGTCGCAGGAATGGGATGTaGAAGAGTGTTTCTCTAAGCATCCTTCGCAGGGTG +
Preference number: 3 (lower is better)
Translates to: PSTPRGSRRNGM*KSVSLSILRRV
Trigger: CACCCTGCGAAGGATGCTTAGAGAAACACTCTTTCACATCCCATTCCTGCGACTTCCGCGTGGCGTGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576263.5
3UTR CCA 72 bp GGAACAAGGTGGTCGAAGACTGGGAGTCCAAGGTACTaGGCTCTGAATCCCCATGGGAGTCCATCTGCTGCA +
Preference number: 3 (lower is better)
Translates to: GTRWSKTGSPRY*ALNPHGSPSAA
Trigger: TGCAGCAGATGGACTCCCATGGGGATTCAGAGCCCAGTACCTTGGACTCCCAGTCTTCGACCACCTTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478660.6
3UTR-3UTR CAA 90 bp CAAAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTGGTTCCCCTGTTGTGTaGTTTGGTAAGGCTGGTTGG +
Preference number: 3 (lower is better)
Translates to: QRLSVGPRGPYVLSAQLPGSPVV*FGKAGW
Trigger: CCAACCAGCCTTACCAAACAACACAACAGGGGAACC...AGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR CCA 72 bp TGGAAAGCTGCCAGTGGGGCCTTGGGTAAGGCAGATTaGGGTTCCCCTGTTGTGTTGTTTGGTAAGGCTGGT +
Preference number: 3 (lower is better)
Translates to: WKAASGALGKAD*GSPVVLFGKAG
Trigger: ACCAGCCTTACCAAACAACACAACAGGGGAACCCCAATCTGCCTTACCCAAGGCCCCACTGGCAGCTTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR CCA 72 bp ATTAAAAGGACTTGGTGCAGAGTTCAGGGAGGGCCGTaGGTTCTGAGGCGGGACACCTACTCTCATACTGGG +
Preference number: 3 (lower is better)
Translates to: IKRTWCRVQGGP*VLRRDTYSHTG
Trigger: CCCAGTATGAGAGTAGGTGTCCCGCCTCAGAACCCACGGCCCTCCCTGAACTCTGCACCAAGTCCTTTTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483377.5
3UTR TCA 72 bp ACCTCATGTCCCTTTAGTGCACCTCAACTGGTTTTGTaGGCTGTCTGCGGAGGGCACTGGTCCATACACAGC +
Preference number: 3 (lower is better)
Translates to: TSCPFSAPQLVL*AVCGGHWSIHS
Trigger: GCTGTGTATGGACCAGTGCCCTCCGCAGACAGCTCACAAAACCAGTTGAGGTGCACTAAAGGGACATGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR GCA 72 bp CCATATGTCCTCTCAGCTCAGCTACCTGCTGGAACCTaGTGCCTTTTCAGAGGACCTACTCCCAAAGGACAG +
Preference number: 3 (lower is better)
Translates to: PYVLSAQLPAGT*CLFRGPTPKGQ
Trigger: CTGTCCTTTGGGAGTAGGTCCTCTGAAAAGGCAGCAGGTTCCAGCAGGTAGCTGAGCTGAGAGGACATATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR GCA 72 bp AGGATCCTGACGAAGTGCCATAGTAGAGATATGGAGTaGTGCTGGTCTGGAAGGGTCCACTCTGGCTTTGGG +
Preference number: 3 (lower is better)
Translates to: RILTKCHSRDME*CWSGRVHSGFG
Trigger: CCCAAAGCCAGAGTGGACCCTTCCAGACCAGCAGCACTCCATATCTCTACTATGGCACTTCGTCAGGATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483377.5
ENST00000646519.1
3UTR GCA 72 bp TTGGATTTAATAGCGTGCTGCCATTCGAGGTGGTGGTaGATGGCGGAAGCATTCTGGAAGGAGACCGGTCTC +
Preference number: 3 (lower is better)
Translates to: LDLIACCHSRWW*MAEAFWKETGL
Trigger: GAGACCGGTCTCCTTCCAGAATGCTTCCGCCATGCACCACCACCTCGAATGGCAGCACGCTATTAAATCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483377.5
ENST00000646519.1
3UTR GCA 72 bp AAAACAAACAAACTTGTGAACGTCACCAGAGATGGATaGCCCACCAACGCTGGAGCTGGCCTCGCTGCTGCT +
Preference number: 3 (lower is better)
Translates to: KTNKLVNVTRDG*PTNAGAGLAAA
Trigger: AGCAGCAGCGAGGCCAGCTCCAGCGTTGGTGGGGCATCCATCTCTGGTGACGTTCACAAGTTTGTTTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576263.5
3UTR TCA 72 bp GTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTaGGGAATTTCAATATGGTCGCCAAACAGATTCATC +
Preference number: 3 (lower is better)
Translates to: VGCGPQIPLGHC*GISIWSPNRFI
Trigger: GATGAATCTGTTTGGCGACCATATTGAAATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646519.1
3UTR CCA 72 bp TCCATTCTACCTCATGTCCCTTTAGTGCACCTCAACTaGTTTTGTGAGCTGTCTGCGGAGGGCACTGGTCCA +
Preference number: 3 (lower is better)
Translates to: SILPHVPLVHLN*FCELSAEGTGP
Trigger: TGGACCAGTGCCCTCCGCAGACAGCTCACAAAACCAGTTGAGGTGCACTAAAGGGACATGAGGTAGAATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR CCA 72 bp GAAATACAAATGTCAAAGGCTGTCTGTAGGTCCCCGTaGGCCATATGTCCTCTCAGCTCAGCTACCTGCTGG +
Preference number: 3 (lower is better)
Translates to: EIQMSKAVCRSP*AICPLSSATCW
Trigger: CCAGCAGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTTTGACATTTGTATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR CCA 72 bp TGCCTGCCTGGGGTCTGTAATCTGACTCTGTCCTTGTaGATTAAAAGGACTTGGTGCAGAGTTCAGGGAGGG +
Preference number: 3 (lower is better)
Translates to: CLPGVCNLTLSL*IKRTWCRVQGG
Trigger: CCCTCCCTGAACTCTGCACCAAGTCCTTTTAATCCACAAGGACAGAGTCAGATTACAGACCCCAGGCAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483377.5
3UTR-3UTR CAA 90 bp ACTTTTGCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCGCTGCCAGTGGGGCCTaGGGTAAGGCAGATTGGGGT +
Preference number: 3 (lower is better)
Translates to: TFANASCFHVLTWILGQSAASGA*GKADWG
Trigger: ACCCCAATCTGCCTTACCCAAGGCCCCACTGGCAGC...GGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGCAAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp TCCTTAAAGCTGTACACACATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCGCTGCCAGTGGGGCCTaGGGTAAGGCAGATTGGGGT +
Preference number: 3 (lower is better)
Translates to: SLKLYTHLLPSEFITDGPAASGA*GKADWG
Trigger: ACCCCAATCTGCCTTACCCAAGGCCCCACTGGCAGC...GGGACCATCTGTGATAAATTCAGAAGGGAGGAGATGTGTGTACAGCTTTAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp CAGATGGTCCCTAATGGTGTGGACTTCTCTGCTCATTTTGAAAGGGCTCTGGCAAGCCCCTTGCCCTCCTaGGCCCTCCATTGTAAGAAA +
Preference number: 3 (lower is better)
Translates to: QMVPNGVDFSAHFERALASPLPS*ALHCKK
Trigger: TTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT...TGCCAGAGCCCTTTCAAAATGAGCAGAGAAGTCCACACCATTAGGGACCATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR CCA 72 bp TGTAATCTGACTCTGTCCTTGTGGATTAAAAGGACTTaGTGCAGAGTTCAGGGAGGGCCGTGGGTTCTGAGG +
Preference number: 3 (lower is better)
Translates to: CNLTLSLWIKRT*CRVQGGPWVLR
Trigger: CCTCAGAACCCACGGCCCTCCCTGAACTCTGCACCAAGTCCTTTTAATCCACAAGGACAGAGTCAGATTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483377.5
3UTR CCA 72 bp AATTTGGATTTAATAGCGTGCTGCCATTCGAGGTGGTaGTGCATGGCGGAAGCATTCTGGAAGGAGACCGGT +
Preference number: 3 (lower is better)
Translates to: NLDLIACCHSRW*CMAEAFWKETG
Trigger: ACCGGTCTCCTTCCAGAATGCTTCCGCCATGCACCACCACCTCGAATGGCAGCACGCTATTAAATCCAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483377.5
ENST00000646519.1
3UTR CCA 72 bp GCAAATTTGGATTTAATAGCGTGCTGCCATTCGAGGTaGTGGTGCATGGCGGAAGCATTCTGGAAGGAGACC +
Preference number: 3 (lower is better)
Translates to: ANLDLIACCHSR*WCMAEAFWKET
Trigger: GGTCTCCTTCCAGAATGCTTCCGCCATGCACCACCACCTCGAATGGCAGCACGCTATTAAATCCAAATTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483377.5
ENST00000646519.1
3UTR CCA 72 bp TTTAAAAACAAACAAACTTGTGAACGTCACCAGAGATaGATGCCCCACCAACGCTGGAGCTGGCCTCGCTGC +
Preference number: 3 (lower is better)
Translates to: FKNKQTCERHQR*MPHQRWSWPRC
Trigger: GCAGCGAGGCCAGCTCCAGCGTTGGTGGGGCATCCATCTCTGGTGACGTTCACAAGTTTGTTTGTTTTTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576263.5
3UTR-3UTR CAA 90 bp TCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCGGAATTGGGTTCCCCTGTTGTGTaGTTTGGTAAGGCTGGTTGG +
Preference number: 3 (lower is better)
Translates to: SCFHVLTWILGQSLSSELGSPVV*FGKAGW
Trigger: CCAACCAGCCTTACCAAACAACACAACAGGGGAACC...CAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp AGCCCCTTGCCCTCCTTGGCCCTCCATTGTAAGAAATACAAATGTCAAAGGCTGATTGGGGTTCCCCTGTaGTGTTGTTTGGTAAGGCTG +
Preference number: 3 (lower is better)
Translates to: SPLPSLALHCKKYKCQRLIGVPL*CCLVRL
Trigger: CAGCCTTACCAAACAACACAACAGGGGAACCCCAAT...CAGCCTTTGACATTTGTATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp TGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAGAACCACGGCTGCCAGTGGGGCCTaGGGTAAGGCAGATTGGGGT +
Preference number: 3 (lower is better)
Translates to: CIEKTANSSNVCATKRTTAASGA*GKADWG
Trigger: ACCCCAATCTGCCTTACCCAAGGCCCCACTGGCAGC...CGTGGTTCTCTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp CAAAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTATTAAGGATTTGCACTaGGAAATCTGCCATGTGACT +
Preference number: 3 (lower is better)
Translates to: QRLSVGPRGPYVLSAQLPIKDLH*EICHVT
Trigger: AGTCACATGGCAGATTTCCAAGTGCAAATCCTTAAT...AGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp GTAGAGATATGGAGTGCTGCTGGTCTGGAAGGGTCCACTCTGGCTTTGGGAAGAGCCCTTTCCTGCTATTaGCTTGAGAAACAAAGCCTT +
Preference number: 3 (lower is better)
Translates to: VEIWSAAGLEGSTLALGRALSCY*LEKQSL
Trigger: AAGGCTTTGTTTCTCAAGCAAATAGCAGGAAAGGGC...TCTTCCCAAAGCCAGAGTGGACCCTTCCAGACCAGCAGCACTCCATATCTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646519.1
3UTR-3UTR CAA 90 bp CCCAGTTCTGAAGCACCTGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGGTTGAACCTTGCTACTaGGTTTTTCATAACAGCAGA +
Preference number: 3 (lower is better)
Translates to: PSSEAPAWLFLLRVEGQRVEPCY*VFHNSR
Trigger: TCTGCTGTTATGAAAAACCAAGTAGCAAGGTTCAAC...CCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCAGGTGCTTCAGAACTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483377.5
3UTR CCA 72 bp TTTGCACTTGGAAATCTGCCATGTGACTGCCAGGAGTaGTCAAAGTGCATGCCACAGAAGGACTCTAGCTCA +
Preference number: 3 (lower is better)
Translates to: FALGNLPCDCQE*SKCMPQKDSSS
Trigger: TGAGCTAGAGTCCTTCTGTGGCATGCACTTTGACCACTCCTGGCAGTCACATGGCAGATTTCCAAGTGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp AATCATGACCTGTGGCACAAAGCGGAATTTTTACAATATGTGCATGGAAAGCAAGCTGCCAGTGGGGCCTaGGGTAAGGCAGATTGGGGT +
Preference number: 3 (lower is better)
Translates to: NHDLWHKAEFLQYVHGKQAASGA*GKADWG
Trigger: ACCCCAATCTGCCTTACCCAAGGCCCCACTGGCAGC...TTGCTTTCCATGCACATATTGTAAAAATTCCGCTTTGTGCCACAGGTCATGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp ACTTTTGCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCAGCCCCTTGCCCTCCTaGGCCCTCCATTGTAAGAAA +
Preference number: 3 (lower is better)
Translates to: TFANASCFHVLTWILGQSSPLPS*ALHCKK
Trigger: TTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT...GGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGCAAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp CAGATGGTCCCTAATGGTGTGGACTTCTCTGCTCATTTTGAAAGGGCTCTGGCACCTACAAAGGTGGGTTaGAGAAGGACCAGAGAACAA +
Preference number: 3 (lower is better)
Translates to: QMVPNGVDFSAHFERALAPTKVG*RRTREQ
Trigger: TTGTTCTCTGGTCCTTCTCAAACCCACCTTTGTAGG...TGCCAGAGCCCTTTCAAAATGAGCAGAGAAGTCCACACCATTAGGGACCATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp CTGTGCCTGCCTGGGGTCTGTAATCTGACTCTGTCCTTGTGGATTAAAAGGACTGTGATAGGTAGCTACTaGGGGAGGATTTGTGAAGAC +
Preference number: 3 (lower is better)
Translates to: LCLPGVCNLTLSLWIKRTVIGSY*GRICED
Trigger: GTCTTCACAAATCCTCCCCAAGTAGCTACCTATCAC...AGTCCTTTTAATCCACAAGGACAGAGTCAGATTACAGACCCCAGGCAGGCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483377.5
3UTR-3UTR CAA 90 bp AGCCCCTTGCCCTCCTTGGCCCTCCATTGTAAGAAATACAAATGTCAAAGGCTGATCTCTGGTGCAATTTaGCTCTCCTGTACTAGGTGT +
Preference number: 3 (lower is better)
Translates to: SPLPSLALHCKKYKCQRLISGAI*LSCTRC
Trigger: ACACCTAGTACAGGAGAGCAAAATTGCACCAGAGAT...CAGCCTTTGACATTTGTATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp GTAGAGATATGGAGTGCTGCTGGTCTGGAAGGGTCCACTCTGGCTTTGGGAAGAACAAATCTCAGATCGTaGAACCTTGCTACTTGGTTT +
Preference number: 3 (lower is better)
Translates to: VEIWSAAGLEGSTLALGRTNLRS*NLATWF
Trigger: AAACCAAGTAGCAAGGTTCAACGATCTGAGATTTGT...TCTTCCCAAAGCCAGAGTGGACCCTTCCAGACCAGCAGCACTCCATATCTCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483377.5
3UTR-3UTR CAA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTCAATCTGAAGCTCGATaGCAATTGTCTCTCTTGAGC +
Preference number: 3 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPQSEAR*QLSLLS
Trigger: GCTCAAGAGAGACAATTGCAATCGAGCTTCAGATTG...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp TCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCGGAATTGCAATCTGAAGCTCGATaGCAATTGTCTCTCTTGAGC +
Preference number: 3 (lower is better)
Translates to: SCFHVLTWILGQSLSSELQSEAR*QLSLLS
Trigger: GCTCAAGAGAGACAATTGCAATCGAGCTTCAGATTG...CAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp TCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCGGAATTGATCTCTGGTGCAATTTaGCTCTCCTGTACTAGGTGT +
Preference number: 3 (lower is better)
Translates to: SCFHVLTWILGQSLSSELISGAI*LSCTRC
Trigger: ACACCTAGTACAGGAGAGCAAAATTGCACCAGAGAT...CAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp TCCTTAAAGCTGTACACACATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCATTGGGGTTCCCCTGTaGTGTTGTTTGGTAAGGCTG +
Preference number: 3 (lower is better)
Translates to: SLKLYTHLLPSEFITDGPIGVPL*CCLVRL
Trigger: CAGCCTTACCAAACAACACAACAGGGGAACCCCAAT...GGGACCATCTGTGATAAATTCAGAAGGGAGGAGATGTGTGTACAGCTTTAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp CAGATGGTCCCTAATGGTGTGGACTTCTCTGCTCATTTTGAAAGGGCTCTGGCAACGATAGTTAATCTGTaGAGTTTCTCAGTTCTGGGC +
Preference number: 3 (lower is better)
Translates to: QMVPNGVDFSAHFERALATIVNL*SFSVLG
Trigger: GCCCAGAACTGAGAAACTCAACAGATTAACTATCGT...TGCCAGAGCCCTTTCAAAATGAGCAGAGAAGTCCACACCATTAGGGACCATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR CCA 72 bp CTCTCTATATATGTATATATTGATACGTGTGGGATGTaGCCCCCAGATACCACTGGGCCACTGCTGAGGAAT +
Preference number: 3 (lower is better)
Translates to: LSIYVYIDTCGM*PPDTTGPLLRN
Trigger: ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATATACATATATAGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp TCCTTAAAGCTGTACACACATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCGAAGCTCGATTGCAATaGTCTCTCTTGAGCCTTCTG +
Preference number: 3 (lower is better)
Translates to: SLKLYTHLLPSEFITDGPEARLQ*SLLSLL
Trigger: CAGAAGGCTCAAGAGAGACAATTGCAATCGAGCTTC...GGGACCATCTGTGATAAATTCAGAAGGGAGGAGATGTGTGTACAGCTTTAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp CTGAATGATGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGGAAGCTCGATTGCAATaGTCTCTCTTGAGCCTTCTG +
Preference number: 3 (lower is better)
Translates to: LNDGTVMEASILPHVPLVEARLQ*SLLSLL
Trigger: CAGAAGGCTCAAGAGAGACAATTGCAATCGAGCTTC...CACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCATCATTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp ATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTAATGGTGTGGACTTCTCTGAAGCTCGATTGCAATaGTCTCTCTTGAGCCTTCTG +
Preference number: 3 (lower is better)
Translates to: ISSLLNLSQMVPNGVDFSEARLQ*SLLSLL
Trigger: CAGAAGGCTCAAGAGAGACAATTGCAATCGAGCTTC...AGAGAAGTCCACACCATTAGGGACCATCTGTGATAAATTCAGAAGGGAGGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp TCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCGGAATTGGTCCACCTCTCTGAATaGGCATATGAACAGGTTATT +
Preference number: 3 (lower is better)
Translates to: SCFHVLTWILGQSLSSELVHLSE*AYEQVI
Trigger: AATAACCTGTTCATATGCCAATTCAGAGAGGTGGAC...CAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTGTCCACCTCTCTGAATaGGCATATGAACAGGTTATT +
Preference number: 3 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPVHLSE*AYEQVI
Trigger: AATAACCTGTTCATATGCCAATTCAGAGAGGTGGAC...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp AATCATGACCTGTGGCACAAAGCGGAATTTTTACAATATGTGCATGGAAAGCAAAGCCCCTTGCCCTCCTaGGCCCTCCATTGTAAGAAA +
Preference number: 3 (lower is better)
Translates to: NHDLWHKAEFLQYVHGKQSPLPS*ALHCKK
Trigger: TTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT...TTGCTTTCCATGCACATATTGTAAAAATTCCGCTTTGTGCCACAGGTCATGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp TCCTTAAAGCTGTACACACATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCACTTCTCTGCTCATTTaGAAAGGGCTCTGGCAAGTG +
Preference number: 3 (lower is better)
Translates to: SLKLYTHLLPSEFITDGPTSLLI*KGLWQV
Trigger: CACTTGCCAGAGCCCTTTCAAAATGAGCAGAGAAGT...GGGACCATCTGTGATAAATTCAGAAGGGAGGAGATGTGTGTACAGCTTTAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp GCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTTTCCTGCTATTTGCTaGAGAAACAAAGCCTTCCCT +
Preference number: 3 (lower is better)
Translates to: ANASCFHVLTWILGQSLSFPAIC*RNKAFP
Trigger: AGGGAAGGCTTTGTTTCTCAAGCAAATAGCAGGAAA...GGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646519.1
3UTR TCA 72 bp TGCTGCCTTTTCAGAGGACCTACTCCCAAAGGACAGTaGTGTCATTCTGCTCCTCTAAATGCAAATTCTGTG +
Preference number: 3 (lower is better)
Translates to: CCLFRGPTPKGQ*CHSAPLNANSV
Trigger: CACAGAATTTGCATTTAGAGGAGCAGAATGACATCACTGTCCTTTGGGAGTAGGTCCTCTGAAAAGGCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR TCA 72 bp GAGGAGAGCAGGGATTGGCCTGGTGGTGTCATTAGATaGTCCTTGTTTGGATTAAGGATTTGCACTTGGAAA +
Preference number: 3 (lower is better)
Translates to: EESRDWPGGVIR*SLFGLRICTWK
Trigger: TTTCCAAGTGCAAATCCTTAATCCAAACAAGGATCATCTAATGACACCACCAGGCCAATCCCTGCTCTCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR GCA 72 bp ATCCTTGTTTGGATTAAGGATTTGCACTTGGAAATCTaGCATGTGACTGCCAGGAGTGGTCAAAGTGCATGC +
Preference number: 3 (lower is better)
Translates to: ILVWIKDLHLEI*HVTARSGQSAC
Trigger: GCATGCACTTTGACCACTCCTGGCAGTCACATGGCAGATTTCCAAGTGCAAATCCTTAATCCAAACAAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR GCA 72 bp TCTGGGTTCCCGAGGTCCATCTACTGTAACTTTAATTaGTCTGTGATAGGTAGCTACTTGGGGAGGATTTGT +
Preference number: 3 (lower is better)
Translates to: SGFPRSIYCNFN*SVIGSYLGRIC
Trigger: ACAAATCCTCCCCAAGTAGCTACCTATCACAGAGCAATTAAAGTTACAGTAGATGGACCTCGGGAACCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483377.5
3UTR CCA 72 bp ACTTTTGCTAATGCTTCGTGTTTCCATGTATTAACCTaGATTCTGGGCCAGTCCCTTTCCTCGGAATTGAGG +
Preference number: 3 (lower is better)
Translates to: TFANASCFHVLT*ILGQSLSSELR
Trigger: CCTCAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGCAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp CAGATGGTCCCTAATGGTGTGGACTTCTCTGCTCATTTTGAAAGGGCTCTGGCATGGCGATTTAGAGTTTaGCTTAACTATGAAACCACA +
Preference number: 3 (lower is better)
Translates to: QMVPNGVDFSAHFERALAWRFRV*LNYETT
Trigger: TGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCA...TGCCAGAGCCCTTTCAAAATGAGCAGAGAAGTCCACACCATTAGGGACCATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp TGCTATGAAGCCTGGCGATTTAGAGTTTTGCTTAACTATGAAACCACAGAACATGGTTCCCCTGTTGTGTaGTTTGGTAAGGCTGGTTGG +
Preference number: 3 (lower is better)
Translates to: CYEAWRFRVLLNYETTEHGSPVV*FGKAGW
Trigger: CCAACCAGCCTTACCAAACAACACAACAGGGGAACC...ATGTTCTGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCAGGCTTCATAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp CTTTGCTTTGGTCTTGAAATCACAAATCAAACACATGACCCAGTGCAAATTAAGAGCCCCTTGCCCTCCTaGGCCCTCCATTGTAAGAAA +
Preference number: 3 (lower is better)
Translates to: LCFGLEITNQTHDPVQIKSPLPS*ALHCKK
Trigger: TTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT...CTTAATTTGCACTGGGTCATGTGTTTGATTTGTGATTTCAAGACCAAAGCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp TCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCGGAATTGATTAAGGATTTGCACTaGGAAATCTGCCATGTGACT +
Preference number: 3 (lower is better)
Translates to: SCFHVLTWILGQSLSSELIKDLH*EICHVT
Trigger: AGTCACATGGCAGATTTCCAAGTGCAAATCCTTAAT...CAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp CAGATGGTCCCTAATGGTGTGGACTTCTCTGCTCATTTTGAAAGGGCTCTGGCAAGAAGGCAAAGTGTTTaGCTTTCCCATCCATTTTTA +
Preference number: 3 (lower is better)
Translates to: QMVPNGVDFSAHFERALARRQSV*LSHPFL
Trigger: TAAAAATGGATGGGAAAGCAAAACACTTTGCCTTCT...TGCCAGAGCCCTTTCAAAATGAGCAGAGAAGTCCACACCATTAGGGACCATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp GTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAACTGGTTTTTCCCTCCTCCCAAGTaGAAAGAAATAAAGGAGTCT +
Preference number: 3 (lower is better)
Translates to: VMEASILPHVPLVHLNWFFPPPK*KEIKES
Trigger: AGACTCCTTTATTTCTTTCAACTTGGGAGGAGGGAA...AAACCAGTTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646519.1
3UTR-3UTR CAA 90 bp TCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCGGAATTGTGGCGATTTAGAGTTTaGCTTAACTATGAAACCACA +
Preference number: 3 (lower is better)
Translates to: SCFHVLTWILGQSLSSELWRFRV*LNYETT
Trigger: TGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCA...CAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTTGGCGATTTAGAGTTTaGCTTAACTATGAAACCACA +
Preference number: 3 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPWRFRV*LNYETT
Trigger: TGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCA...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp ATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTAATGGTGTGGACTTCTCTACGATAGTTAATCTGTaGAGTTTCTCAGTTCTGGGC +
Preference number: 3 (lower is better)
Translates to: ISSLLNLSQMVPNGVDFSTIVNL*SFSVLG
Trigger: GCCCAGAACTGAGAAACTCAACAGATTAACTATCGT...AGAGAAGTCCACACCATTAGGGACCATCTGTGATAAATTCAGAAGGGAGGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp ACTTTTGCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCACGATAGTTAATCTGTaGAGTTTCTCAGTTCTGGGC +
Preference number: 3 (lower is better)
Translates to: TFANASCFHVLTWILGQSTIVNL*SFSVLG
Trigger: GCCCAGAACTGAGAAACTCAACAGATTAACTATCGT...GGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGCAAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp TGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAGAACCACGATCTCTGGTGCAATTTaGCTCTCCTGTACTAGGTGT +
Preference number: 3 (lower is better)
Translates to: CIEKTANSSNVCATKRTTISGAI*LSCTRC
Trigger: ACACCTAGTACAGGAGAGCAAAATTGCACCAGAGAT...CGTGGTTCTCTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp ATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTAATGGTGTGGACTTCTCTATTAAGGATTTGCACTaGGAAATCTGCCATGTGACT +
Preference number: 3 (lower is better)
Translates to: ISSLLNLSQMVPNGVDFSIKDLH*EICHVT
Trigger: AGTCACATGGCAGATTTCCAAGTGCAAATCCTTAAT...AGAGAAGTCCACACCATTAGGGACCATCTGTGATAAATTCAGAAGGGAGGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp ACTTTTGCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCATTAAGGATTTGCACTaGGAAATCTGCCATGTGACT +
Preference number: 3 (lower is better)
Translates to: TFANASCFHVLTWILGQSIKDLH*EICHVT
Trigger: AGTCACATGGCAGATTTCCAAGTGCAAATCCTTAAT...GGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGCAAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp CTTTGCTTTGGTCTTGAAATCACAAATCAAACACATGACCCAGTGCAAATTAAGTCTGCTAAATTCTGCTaGGGTGGGTGGAGGATTCCA +
Preference number: 3 (lower is better)
Translates to: LCFGLEITNQTHDPVQIKSAKFC*GGWRIP
Trigger: TGGAATCCTCCACCCACCCAAGCAGAATTTAGCAGA...CTTAATTTGCACTGGGTCATGTGTTTGATTTGTGATTTCAAGACCAAAGCAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp TGCTATGAAGCCTGGCGATTTAGAGTTTTGCTTAACTATGAAACCACAGAACATCCTACAAAGGTGGGTTaGAGAAGGACCAGAGAACAA +
Preference number: 3 (lower is better)
Translates to: CYEAWRFRVLLNYETTEHPTKVG*RRTREQ
Trigger: TTGTTCTCTGGTCCTTCTCAAACCCACCTTTGTAGG...ATGTTCTGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCAGGCTTCATAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp AATCATGACCTGTGGCACAAAGCGGAATTTTTACAATATGTGCATGGAAAGCAAATCTCTGGTGCAATTTaGCTCTCCTGTACTAGGTGT +
Preference number: 3 (lower is better)
Translates to: NHDLWHKAEFLQYVHGKQISGAI*LSCTRC
Trigger: ACACCTAGTACAGGAGAGCAAAATTGCACCAGAGAT...TTGCTTTCCATGCACATATTGTAAAAATTCCGCTTTGTGCCACAGGTCATGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp TCCTTAAAGCTGTACACACATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCAGAAGGCAAAGTGTTTaGCTTTCCCATCCATTTTTA +
Preference number: 3 (lower is better)
Translates to: SLKLYTHLLPSEFITDGPRRQSV*LSHPFL
Trigger: TAAAAATGGATGGGAAAGCAAAACACTTTGCCTTCT...GGGACCATCTGTGATAAATTCAGAAGGGAGGAGATGTGTGTACAGCTTTAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp TGCTATGAAGCCTGGCGATTTAGAGTTTTGCTTAACTATGAAACCACAGAACATGTCCACCTCTCTGAATaGGCATATGAACAGGTTATT +
Preference number: 3 (lower is better)
Translates to: CYEAWRFRVLLNYETTEHVHLSE*AYEQVI
Trigger: AATAACCTGTTCATATGCCAATTCAGAGAGGTGGAC...ATGTTCTGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCAGGCTTCATAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR TCA 72 bp TACATATATATGCACTCTCTCTATATATGTATATATTaGTACGTGTGGGATGTGGCCCCCAGATACCACTGG +
Preference number: 3 (lower is better)
Translates to: YIYMHSLYICIY*YVWDVAPRYHW
Trigger: CCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp AAATTAGAAAACCACATCACTCCAGCATTTCATGCTGATAAAGGGCTAAAGGTTGTCCACCTCTCTGAATaGGCATATGAACAGGTTATT +
Preference number: 3 (lower is better)
Translates to: KLENHITPAFHADKGLKVVHLSE*AYEQVI
Trigger: AATAACCTGTTCATATGCCAATTCAGAGAGGTGGAC...AACCTTTAGCCCTTTATCAGCATGAAATGCTGGAGTGATGTGGTTTTCTAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp AATCATGACCTGTGGCACAAAGCGGAATTTTTACAATATGTGCATGGAAAGCAACATGGAAAGCAATTCTaGGGCAATAGCAATTGGAAA +
Preference number: 3 (lower is better)
Translates to: NHDLWHKAEFLQYVHGKQHGKQF*GNSNWK
Trigger: TTTCCAATTGCTATTGCCCAAGAATTGCTTTCCATG...TTGCTTTCCATGCACATATTGTAAAAATTCCGCTTTGTGCCACAGGTCATGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp AATAGGATGCAGCTGGCACTGGCGGTAGCATTTTTATGTCAATTAATTAAAATTACGATAGTTAATCTGTaGAGTTTCTCAGTTCTGGGC +
Preference number: 3 (lower is better)
Translates to: NRMQLALAVAFLCQLIKITIVNL*SFSVLG
Trigger: GCCCAGAACTGAGAAACTCAACAGATTAACTATCGT...AATTTTAATTAATTGACATAAAAATGCTACCGCCAGTGCCAGCTGCATCCTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR GCA 72 bp GAACTAGTACATGGTTCCACAGTAGTAGTAAGACTTTaGTTTGGTCTTGAAATCACAAATCAAACACATGAC +
Preference number: 3 (lower is better)
Translates to: ELVHGSTVVVRL*FGLEITNQTHD
Trigger: GTCATGTGTTTGATTTGTGATTTCAAGACCAAAGCAAAGTCTTACTACTACTGTGGAACCATGTACTAGTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp AATAGGATGCAGCTGGCACTGGCGGTAGCATTTTTATGTCAATTAATTAAAATTTGGCGATTTAGAGTTTaGCTTAACTATGAAACCACA +
Preference number: 3 (lower is better)
Translates to: NRMQLALAVAFLCQLIKIWRFRV*LNYETT
Trigger: TGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCA...AATTTTAATTAATTGACATAAAAATGCTACCGCCAGTGCCAGCTGCATCCTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR-3UTR CAA 90 bp AATAGGATGCAGCTGGCACTGGCGGTAGCATTTTTATGTCAATTAATTAAAATTAGAAGGCAAAGTGTTTaGCTTTCCCATCCATTTTTA +
Preference number: 3 (lower is better)
Translates to: NRMQLALAVAFLCQLIKIRRQSV*LSHPFL
Trigger: TAAAAATGGATGGGAAAGCAAAACACTTTGCCTTCT...AATTTTAATTAATTGACATAAAAATGCTACCGCCAGTGCCAGCTGCATCCTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp GACAGGCAGGGATGCCTGGTGCAAGCGATCCCTCGGCCCCGGGGCGGCCCAGCCGCGTCCTGGGTGCGCTaGCGCCCCCTCCCAGTTGGA +
Preference number: 4 (lower is better)
Translates to: DRQGCLVQAIPRPRGGPAASWVR*RPLPVG
Trigger: TCCAACTGGGAGGGGGCGCCAGCGCACCCAGGACGC...GGCTGGGCCGCCCCGGGGCCGAGGGATCGCTTGCACCAGGCATCCCTGCCTGTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CCA 90 bp CTCGGGGCGGCGGGGATGTACCCGCGTCCACGGTGCCCTCCTCCCTGCCCGCAGGGCGCGCTTCGCTGCTaGGGAGGGACAGGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: LGAAGMYPRPRCPPPCPQGALRC*GGTGRD
Trigger: ATCCCTGCCTGTCCCTCCCCAGCAGCGAAGCGCGCC...CTGCGGGCAGGGAGGAGGGCACCGTGGACGCGGGTACATCCCCGCCGCCCCGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR GCA 90 bp TGCGCAGAGCAACCGCTCCTCCGCTGGGCGCGCTTCGCTGCTGGGGAGGGACAGACCCGGGGTGGCAGCTaGGAACGGGCGCGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: CAEQPLLRWARFAAGEGQTRGGS*ERARGC
Trigger: ACACCCCCGCGCCCGTTCGCAGCTGCCACCCCGGGT...CTGTCCCTCCCCAGCAGCGAAGCGCGCCCAGCGGAGGAGCGGTTGCTCTGCGCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CCA 90 bp GGACAGGCAGGGATGCCTGGTGCAAGCGATCCCTCGGCCCCGGGGCGGCCCAGCGGCGGTGGAGGGGCCTaGCTCCTCCGAGGAGAGGAA +
Preference number: 4 (lower is better)
Translates to: GQAGMPGASDPSAPGRPSGGGGA*LLRGEE
Trigger: TTCCTCTCCTCGGAGGAGCCAGGCCCCTCCACCGCC...GCTGGGCCGCCCCGGGGCCGAGGGATCGCTTGCACCAGGCATCCCTGCCTGTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
CDS-3UTR CCA 90 bp TGCGCAGAGCAACCGCTCCTCCGCTGGGCGCGCTTCGCTGCTGGGGAGGGACAGATGGCAGGGCGGCGGTaGAGGGGCCTGGCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: CAEQPLLRWARFAAGEGQMAGRR*RGLAPP
Trigger: CGGAGGAGCCAGGCCCCTCCACCGCCGCCCTGCCAT...CTGTCCCTCCCCAGCAGCGAAGCGCGCCCAGCGGAGGAGCGGTTGCTCTGCGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
CDS-3UTR CCA 90 bp TCGGGGCGGCGGGGATGTACCCGCGTCCACGGTGCCCTCCTCCCTGCCCGCAGTCAGCGGAGGCAGCGCTaGCGGACCTGGGGAAAAGGC +
Preference number: 4 (lower is better)
Translates to: SGRRGCTRVHGALLPARSQRRQR*RTWGKG
Trigger: GCCTTTTCCCCAGGTCCGCCAGCGCTGCCTCCGCTG...ACTGCGGGCAGGGAGGAGGGCACCGTGGACGCGGGTACATCCCCGCCGCCCCGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CCA 90 bp GCTGCGCAGAGCAACCGCTCCTCCGCTGGGCGCGCTTCGCTGCTGGGGAGGGACCAACCGCTCCTCCGCTaGGCGCGCTTCGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: AAQSNRSSAGRASLLGRDQPLLR*ARFAAG
Trigger: CCCAGCAGCGAAGCGCGCCCAGCGGAGGAGCGGTTG...GTCCCTCCCCAGCAGCGAAGCGCGCCCAGCGGAGGAGCGGTTGCTCTGCGCAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
CDS-3UTR TCA 90 bp GGACAGGCAGGGATGCCTGGTGCAAGCGATCCCTCGGCCCCGGGGCGGCCCAGCGAGGGCCGTGGGTTCTaGGGCGGGACACCTACTCTC +
Preference number: 4 (lower is better)
Translates to: GQAGMPGASDPSAPGRPSEGRGF*GGTPTL
Trigger: GAGAGTAGGTGTCCCGCCTCAGAACCCACGGCCCTC...GCTGGGCCGCCCCGGGGCCGAGGGATCGCTTGCACCAGGCATCCCTGCCTGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR GCA 90 bp AGGATGTCCCCGACGTGGGCCTCCAAGCTCGCCGCAGCGGCGGGCCGGGCTCGGTGTTGCTGCTGCTGTTaGGCAGCCACCACCGGGCTC +
Preference number: 4 (lower is better)
Translates to: RMSPTWASKLAAAAGRARCCCCC*AATTGL
Trigger: GAGCCCGGTGGTGGCTGCGCAACAGCAGCAGCAACA...CCGAGCCCGGCCCGCCGCTGCGGCGAGCTTGGAGGCCCACGTCGGGGACATCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR GCA 90 bp GACAGGCAGGGATGCCTGGTGCAAGCGATCCCTCGGCCCCGGGGCGGCCCAGCCCGGCGGGGAAGACTGTaGCTGCCTGGGGTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: DRQGCLVQAIPRPRGGPARRGRL*LPGVSG
Trigger: CCCAGAAACCCCAGGCAGGCACAGTCTTCCCCGCCG...GGCTGGGCCGCCCCGGGGCCGAGGGATCGCTTGCACCAGGCATCCCTGCCTGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CCA 90 bp GGGAGGGACAGGCAGGGATGCCTGGTGCAAGCGATCCCTCGGCCCCGGGGCGGCCAGCGCTGGCGGACCTaGGGAAAAGGCCTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: GRDRQGCLVQAIPRPRGGQRWRT*GKGLRL
Trigger: GAGCCTCAGGCCTTTTCCCCAGGTCCGCCAGCGCTG...GCCGCCCCGGGGCCGAGGGATCGCTTGCACCAGGCATCCCTGCCTGTCCCTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
CDS-3UTR CCA 90 bp GGACAGGCAGGGATGCCTGGTGCAAGCGATCCCTCGGCCCCGGGGCGGCCCAGCATGCCCCACCAACGCTaGAGCTGGCCTCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GQAGMPGASDPSAPGRPSMPHQR*SWPRCC
Trigger: GCAGCAGCGAGGCCAGCTCCAGCGTTGGTGGGGCAT...GCTGGGCCGCCCCGGGGCCGAGGGATCGCTTGCACCAGGCATCCCTGCCTGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR GCA 90 bp GGGAGGGACAGGCAGGGATGCCTGGTGCAAGCGATCCCTCGGCCCCGGGGCGGCTGTTGCTGCTGCTGTTaGGCAGCCACCACCGGGCTC +
Preference number: 4 (lower is better)
Translates to: GRDRQGCLVQAIPRPRGGCCCCC*AATTGL
Trigger: GAGCCCGGTGGTGGCTGCGCAACAGCAGCAGCAACA...GCCGCCCCGGGGCCGAGGGATCGCTTGCACCAGGCATCCCTGCCTGTCCCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
CDS-3UTR GCA 90 bp AGGATGTCCCCGACGTGGGCCTCCAAGCTCGCCGCAGCGGCGGGCCGGGCTCGGTGCTGCTGCTGTTGCTaGTGCTGTTGCGCAGCCACC +
Preference number: 4 (lower is better)
Translates to: RMSPTWASKLAAAAGRARCCCCC*CCCAAT
Trigger: GGTGGCTGCGCAACAGCAGCAGCAACAGCAGCAGCA...CCGAGCCCGGCCCGCCGCTGCGGCGAGCTTGGAGGCCCACGTCGGGGACATCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR GCA 90 bp TGCGCAGAGCAACCGCTCCTCCGCTGGGCGCGCTTCGCTGCTGGGGAGGGACAGGCCGCCGCCTCCTGCTaGTGCTGCTGCTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: CAEQPLLRWARFAAGEGQAAASC*CCCCCC
Trigger: GCAGCAACAGCAGCAGCAGCAGCAGGAGGCGGCGGC...CTGTCCCTCCCCAGCAGCGAAGCGCGCCCAGCGGAGGAGCGGTTGCTCTGCGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
CDS-3UTR GCA 90 bp CCGCTAGGCAGCTGCGCAGAGCAACCGCTCCTCCGCTGGGCGCGCTTCGCTGCTGGCAGGGATGCCTGGTaGAAGCGATCCCTCGGCCCC +
Preference number: 4 (lower is better)
Translates to: PLGSCAEQPLLRWARFAAGRDAW*KRSLGP
Trigger: GGGGCCGAGGGATCGCTTGCACCAGGCATCCCTGCC...AGCAGCGAAGCGCGCCCAGCGGAGGAGCGGTTGCTCTGCGCAGCTGCCTAGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
CDS-3UTR GCA 90 bp CAGAGCAACCGCTCCTCCGCTGGGCGCGCTTCGCTGCTGGGGAGGGACAGGCAGGGCAGGGATGCCTGGTaGAAGCGATCCCTCGGCCCC +
Preference number: 4 (lower is better)
Translates to: QSNRSSAGRASLLGRDRQGRDAW*KRSLGP
Trigger: GGGGCCGAGGGATCGCTTGCACCAGGCATCCCTGCC...CTGCCTGTCCCTCCCCAGCAGCGAAGCGCGCCCAGCGGAGGAGCGGTTGCTCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
CDS-3UTR CCA 90 bp GGGAGGGACAGGCAGGGATGCCTGGTGCAAGCGATCCCTCGGCCCCGGGGCGGCACGAGTTCGGCCGGGTaGTCGGCGATGATCTCCACC +
Preference number: 4 (lower is better)
Translates to: GRDRQGCLVQAIPRPRGGTSSAG*SAMIST
Trigger: GGTGGAGATCATCGCCGACCACCCGGCCGAACTCGT...GCCGCCCCGGGGCCGAGGGATCGCTTGCACCAGGCATCCCTGCCTGTCCCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
CDS-3UTR CCA 90 bp GGCGGCGGGGATGTACCCGCGTCCACGGTGCCCTCCTCCCTGCCCGCAGTGCTGGGTGGTGAAGCGGTGTaGGTTCAGCAGTCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GGGDVPASTVPSSLPAVLGGEAV*VQQSSP
Trigger: GGGGCTGGACTGCTGAACCCACACCGCTTCACCACC...CAGCACTGCGGGCAGGGAGGAGGGCACCGTGGACGCGGGTACATCCCCGCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CCA 90 bp GGACAGGCAGGGATGCCTGGTGCAAGCGATCCCTCGGCCCCGGGGCGGCCCAGCCCAGGTGGCCGTTCATaGTCCGCAGCTCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: GQAGMPGASDPSAPGRPSPGGRS*SAAPPG
Trigger: TCCTGGTGGAGCTGCGGACCATGAACGGCCACCTGG...GCTGGGCCGCCCCGGGGCCGAGGGATCGCTTGCACCAGGCATCCCTGCCTGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
CDS-3UTR CCA 90 bp CAGAGCAACCGCTCCTCCGCTGGGCGCGCTTCGCTGCTGGGGAGGGACAGGCAGGGCGCGCTTCGCTGCTaGGGAGGGACAGGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: QSNRSSAGRASLLGRDRQGALRC*GGTGRD
Trigger: ATCCCTGCCTGTCCCTCCCCAGCAGCGAAGCGCGCC...CTGCCTGTCCCTCCCCAGCAGCGAAGCGCGCCCAGCGGAGGAGCGGTTGCTCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
CDS-3UTR TCA 90 bp CGGGGATGTACCCGCGTCCACGGTGCCCTCCTCCCTGCCCGCAGTGCTGGGGCGGGGAGGCGGGGGACTTaGGTTTGCAGCTTGGAATGG +
Preference number: 4 (lower is better)
Translates to: RGCTRVHGALLPARSAGAGRRGT*VCSLEW
Trigger: CCATTCCAAGCTGCAAACTCAAGTCCCCCGCCTCCC...CGCCCCAGCACTGCGGGCAGGGAGGAGGGCACCGTGGACGCGGGTACATCCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR TCA 90 bp TTCGCTGCTGGGGAGGGACAGGCAGGGATGCCTGGTGCAAGCGATCCCTCGGCCGGAGGAGGCGACGACTaGGTAGCGGCCTGTGCGCCG +
Preference number: 4 (lower is better)
Translates to: FAAGEGQAGMPGASDPSAGGGDD*VAACAP
Trigger: CGGCGCACAGGCCGCTACTCAGTCGTCGCCTCCTCC...GGCCGAGGGATCGCTTGCACCAGGCATCCCTGCCTGTCCCTCCCCAGCAGCGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
CDS-3UTR TCA 90 bp GGGCGGCGGGGATGTACCCGCGTCCACGGTGCCCTCCTCCCTGCCCGCAGTGCTACGAAGCCAGTTTGGTaGGGGCCCGCGCTATGCTGT +
Preference number: 4 (lower is better)
Translates to: GRRGCTRVHGALLPARSATKPVW*GPALCC
Trigger: ACAGCATAGCGCGGGCCCTCACCAAACTGGCTTCGT...AGCACTGCGGGCAGGGAGGAGGGCACCGTGGACGCGGGTACATCCCCGCCGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR GCA 90 bp TCGGGGCGGCGGGGATGTACCCGCGTCCACGGTGCCCTCCTCCCTGCCCGCAGTTGCTGCTGTTGCTGCTaGTGTTGCGCAGCCACCACC +
Preference number: 4 (lower is better)
Translates to: SGRRGCTRVHGALLPARSCCCCC*CCAATT
Trigger: GGTGGTGGCTGCGCAACAGCAGCAGCAACAGCAGCA...ACTGCGGGCAGGGAGGAGGGCACCGTGGACGCGGGTACATCCCCGCCGCCCCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR GCA 90 bp GGCGGCGGCCGCTCCTTGTCATCCCCGCGTGTGCTGGGAGAGATGGTCGAAGGGGCCGCCGCCTCCTGCTaGTGCTGCTGCTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: GGGRSLSSPRVLGEMVEGAAASC*CCCCCC
Trigger: GCAGCAACAGCAGCAGCAGCAGCAGGAGGCGGCGGC...CCCTTCGACCATCTCTCCCAGCACACGCGGGGATGACAAGGAGCGGCCGCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR GCA 90 bp TGCTGGGAGAGATGGTCGAAGGGCAACCGGGGAGCCAGTCGACCAGACGCGGGGCTGGGCGCGCTTCGCTaGTGGGGAGGGACAGGCAGG +
Preference number: 4 (lower is better)
Translates to: CWERWSKGNRGASRPDAGLGALR*WGGTGR
Trigger: CCTGCCTGTCCCTCCCCAGCAGCGAAGCGCGCCCAG...CCCCGCGTCTGGTCGACTGGCTCCCCGGTTGCCCTTCGACCATCTCTCCCAGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR GCA 90 bp TTCGCTGCTGGGGAGGGACAGGCAGGGATGCCTGGTGCAAGCGATCCCTCGGCCCTGGGCGCGCTTCGCTaGTGGGGAGGGACAGGCAGG +
Preference number: 4 (lower is better)
Translates to: FAAGEGQAGMPGASDPSALGALR*WGGTGR
Trigger: CCTGCCTGTCCCTCCCCAGCAGCGAAGCGCGCCCAG...GGCCGAGGGATCGCTTGCACCAGGCATCCCTGCCTGTCCCTCCCCAGCAGCGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
CDS-3UTR GCA 90 bp GGGAGGGACAGGCAGGGATGCCTGGTGCAAGCGATCCCTCGGCCCCGGGGCGGCTTTCCGCTAGGCAGCTaGGCAGAGCAACCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: GRDRQGCLVQAIPRPRGGFPLGS*AEQPLL
Trigger: GAGGAGCGGTTGCTCTGCGCAGCTGCCTAGCGGAAA...GCCGCCCCGGGGCCGAGGGATCGCTTGCACCAGGCATCCCTGCCTGTCCCTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
CDS-3UTR CCA 90 bp CAGAGCAACCGCTCCTCCGCTGGGCGCGCTTCGCTGCTGGGGAGGGACAGGCAGGTTCAGGGAGGGCCGTaGGTTCTGAGGCGGGACACC +
Preference number: 4 (lower is better)
Translates to: QSNRSSAGRASLLGRDRQVQGGP*VLRRDT
Trigger: GGTGTCCCGCCTCAGAACCCACGGCCCTCCCTGAAC...CTGCCTGTCCCTCCCCAGCAGCGAAGCGCGCCCAGCGGAGGAGCGGTTGCTCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR CCA 90 bp TGCGCAGAGCAACCGCTCCTCCGCTGGGCGCGCTTCGCTGCTGGGGAGGGACAGTGGAATGGGGTCCCTTaGGGCACCGCGTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: CAEQPLLRWARFAAGEGQWNGVP*GTASWV
Trigger: CACCCAGGACGCGGTGCCCCAAGGGACCCCATTCCA...CTGTCCCTCCCCAGCAGCGAAGCGCGCCCAGCGGAGGAGCGGTTGCTCTGCGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CCA 90 bp GACAGGCAGGGATGCCTGGTGCAAGCGATCCCTCGGCCCCGGGGCGGCCCAGCCGTTTGCAGCTTGGAATaGGGTCCCTTGGGGCACCGC +
Preference number: 4 (lower is better)
Translates to: DRQGCLVQAIPRPRGGPAVCSLE*GPLGHR
Trigger: GCGGTGCCCCAAGGGACCCCATTCCAAGCTGCAAAC...GGCTGGGCCGCCCCGGGGCCGAGGGATCGCTTGCACCAGGCATCCCTGCCTGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CCA 90 bp GGGAGGGACAGGCAGGGATGCCTGGTGCAAGCGATCCCTCGGCCCCGGGGCGGCCTTTGCCGGAGTCTTTaGAACACCCGGGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: GRDRQGCLVQAIPRPRGGLCRSL*NTRGGS
Trigger: GCTGCCACCCCGGGTGTTCCAAAGACTCCGGCAAAG...GCCGCCCCGGGGCCGAGGGATCGCTTGCACCAGGCATCCCTGCCTGTCCCTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CCA 90 bp TGCTGGGAGAGATGGTCGAAGGGCAACCGGGGAGCCAGTCGACCAGACGCGGGGCAACCGCTCCTCCGCTaGGCGCGCTTCGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: CWERWSKGNRGASRPDAGQPLLR*ARFAAG
Trigger: CCCAGCAGCGAAGCGCGCCCAGCGGAGGAGCGGTTG...CCCCGCGTCTGGTCGACTGGCTCCCCGGTTGCCCTTCGACCATCTCTCCCAGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR GCA 90 bp CGGGGATGTACCCGCGTCCACGGTGCCCTCCTCCCTGCCCGCAGTGCTGGGGCGTGTCATCCCCGCGTGTaGTGGGAGAGATGGTCGAAG +
Preference number: 4 (lower is better)
Translates to: RGCTRVHGALLPARSAGACHPRV*WERWSK
Trigger: CTTCGACCATCTCTCCCAGCACACGCGGGGATGACA...CGCCCCAGCACTGCGGGCAGGGAGGAGGGCACCGTGGACGCGGGTACATCCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CCA 90 bp TCGGGGCGGCGGGGATGTACCCGCGTCCACGGTGCCCTCCTCCCTGCCCGCAGTCCGCAAGCCTGCTGGTaGAGCTTCAGCTTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: SGRRGCTRVHGALLPARSPQACW*SFSLSV
Trigger: CACTGACAAGCTGAAGCTCCACCAGCAGGCTTGCGG...ACTGCGGGCAGGGAGGAGGGCACCGTGGACGCGGGTACATCCCCGCCGCCCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CCA 90 bp AGGATGTCCCCGACGTGGGCCTCCAAGCTCGCCGCAGCGGCGGGCCGGGCTCGGAAGGTGGTCGAAGACTaGGAGTCCAAGGTACTGGGC +
Preference number: 4 (lower is better)
Translates to: RMSPTWASKLAAAAGRARKVVED*ESKVLG
Trigger: GCCCAGTACCTTGGACTCCCAGTCTTCGACCACCTT...CCGAGCCCGGCCCGCCGCTGCGGCGAGCTTGGAGGCCCACGTCGGGGACATCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CCA 90 bp GGGCGGCGGCCGCTCCTTGTCATCCCCGCGTGTGCTGGGAGAGATGGTCGAAGGCAGCGCTGGCGGACCTaGGGAAAAGGCCTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: GRRPLLVIPACAGRDGRRQRWRT*GKGLRL
Trigger: GAGCCTCAGGCCTTTTCCCCAGGTCCGCCAGCGCTG...CCTTCGACCATCTCTCCCAGCACACGCGGGGATGACAAGGAGCGGCCGCCGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CCA 90 bp CCGCTAGGCAGCTGCGCAGAGCAACCGCTCCTCCGCTGGGCGCGCTTCGCTGCTGGCATCCGAAACATCTaGCAGGGGCTCAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PLGSCAEQPLLRWARFAAGIRNI*QGLRLG
Trigger: CCCCAGCCTGAGCCCCTGCCAGATGTTTCGGATGCC...AGCAGCGAAGCGCGCCCAGCGGAGGAGCGGTTGCTCTGCGCAGCTGCCTAGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
CDS-3UTR TCA 90 bp CCAGGTGGCCGTTCATGGTCCGCAGCTCCACCAGGATGTCCCCGACGTGGGCCTCGAGGGCTACCACCTTaGAGGCCACGGGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: PGGRSWSAAPPGCPRRGPRGLPP*RPRAGS
Trigger: AGACCCTGCCCGTGGCCTTCAAGGTGGTAGCCCTCG...AGGCCCACGTCGGGGACATCCTGGTGGAGCTGCGGACCATGAACGGCCACCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR TCA 90 bp CTAGGCAGCTGCGCAGAGCAACCGCTCCTCCGCTGGGCGCGCTTCGCTGCTGGGGTTGGAGTCCGGTGGTaGAGCGGTGTGGGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: LGSCAEQPLLRWARFAAGVGVRW*SGVGSA
Trigger: TGCTGAACCCACACCGCTTCACCACCGGACTCCAAC...CCCAGCAGCGAAGCGCGCCCAGCGGAGGAGCGGTTGCTCTGCGCAGCTGCCTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR TCA 90 bp TGCGCAGAGCAACCGCTCCTCCGCTGGGCGCGCTTCGCTGCTGGGGAGGGACAGACGAAGCCAGTTTGGTaGGGGCCCGCGCTATGCTGT +
Preference number: 4 (lower is better)
Translates to: CAEQPLLRWARFAAGEGQTKPVW*GPALCC
Trigger: ACAGCATAGCGCGGGCCCTCACCAAACTGGCTTCGT...CTGTCCCTCCCCAGCAGCGAAGCGCGCCCAGCGGAGGAGCGGTTGCTCTGCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
CDS-3UTR GCA 90 bp CCAGGACGGGCGGCGGCCGCTCCTTGTCATCCCCGCGTGTGCTGGGAGAGATGGTCACGTCGCTCATTTTaGCGGGCTGCAGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PGRAAAAPCHPRVCWERWSRRSF*RAAGCW
Trigger: CCAGCAGCCTGCAGCCCGGCAAAATGAGCGACGTGA...CCATCTCTCCCAGCACACGCGGGGATGACAAGGAGCGGCCGCCGCCCGTCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR GCA 90 bp CAGAGCAACCGCTCCTCCGCTGGGCGCGCTTCGCTGCTGGGGAGGGACAGGCAGTGCTGCTGTTGCTGCTaGTGTTGCGCAGCCACCACC +
Preference number: 4 (lower is better)
Translates to: QSNRSSAGRASLLGRDRQCCCCC*CCAATT
Trigger: GGTGGTGGCTGCGCAACAGCAGCAGCAACAGCAGCA...CTGCCTGTCCCTCCCCAGCAGCGAAGCGCGCCCAGCGGAGGAGCGGTTGCTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
CDS-3UTR GCA 90 bp TGCGCAGAGCAACCGCTCCTCCGCTGGGCGCGCTTCGCTGCTGGGGAGGGACAGCGGCGGGGAAGACTGTaGCTGCCTGGGGTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: CAEQPLLRWARFAAGEGQRRGRL*LPGVCN
Trigger: ATTACAGACCCCAGGCAGGCACAGTCTTCCCCGCCG...CTGTCCCTCCCCAGCAGCGAAGCGCGCCCAGCGGAGGAGCGGTTGCTCTGCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR GCA 90 bp CCTCGGCCCCGGGGCGGCCCAGCCTCGCCGAGCTCCATTAGTTGGCATCCGAAATGGCAGGAAGCCCAGTaGCCCGTGTGGAAGACAGCG +
Preference number: 4 (lower is better)
Translates to: PRPRGGPASPSSISWHPKWQEAQ*PVWKTA
Trigger: CGCTGTCTTCCACACGGGGCACTGGGCTTCCTGCCA...TTTCGGATGCCAACTAATGGAGCTCGGCGAGGCTGGGCCGCCCCGGGGCCGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR GCA 90 bp CTAGGCAGCTGCGCAGAGCAACCGCTCCTCCGCTGGGCGCGCTTCGCTGCTGGGAGGGACAGGCAGGGATaGCTGGTGCAAGCGATCCCT +
Preference number: 4 (lower is better)
Translates to: LGSCAEQPLLRWARFAAGRDRQG*LVQAIP
Trigger: AGGGATCGCTTGCACCAGGCATCCCTGCCTGTCCCT...CCCAGCAGCGAAGCGCGCCCAGCGGAGGAGCGGTTGCTCTGCGCAGCTGCCTAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
CDS-3UTR GCA 90 bp TGCGCAGAGCAACCGCTCCTCCGCTGGGCGCGCTTCGCTGCTGGGGAGGGACAGTTTCCGCTAGGCAGCTaGGCAGAGCAACCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: CAEQPLLRWARFAAGEGQFPLGS*AEQPLL
Trigger: GAGGAGCGGTTGCTCTGCGCAGCTGCCTAGCGGAAA...CTGTCCCTCCCCAGCAGCGAAGCGCGCCCAGCGGAGGAGCGGTTGCTCTGCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
CDS-3UTR GCA 90 bp CCGCTAGGCAGCTGCGCAGAGCAACCGCTCCTCCGCTGGGCGCGCTTCGCTGCTGAAACGCTAGGGCCGTaGTTTCCGCTAGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PLGSCAEQPLLRWARFAAETLGP*FPLGSC
Trigger: GCAGCTGCCTAGCGGAAAGCACGGCCCTAGCGTTTC...AGCAGCGAAGCGCGCCCAGCGGAGGAGCGGTTGCTCTGCGCAGCTGCCTAGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
CDS-3UTR CCA 90 bp GGGAGGGACAGGCAGGGATGCCTGGTGCAAGCGATCCCTCGGCCCCGGGGCGGCAACCACAGTCCCATCTaGTACCTCTCCGAGGGCTAC +
Preference number: 4 (lower is better)
Translates to: GRDRQGCLVQAIPRPRGGNHSPI*YLSEGY
Trigger: GTAGCCCTCGGAGAGGTACCAGATGGGACTGTGGTT...GCCGCCCCGGGGCCGAGGGATCGCTTGCACCAGGCATCCCTGCCTGTCCCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
CDS-3UTR CCA 90 bp AGGCTGGGGCCCCAGGGACGAAGCCAGTTTGGTGAGGGCCCGCGCTATGCTGTCGGGGTGTGTTTGGCCTaGGGAGGCGGGGGACTTGAG +
Preference number: 4 (lower is better)
Translates to: RLGPQGRSQFGEGPRYAVGVCLA*GGGGLE
Trigger: CTCAAGTCCCCCGCCTCCCCAGGCCAAACACACCCC...GACAGCATAGCGCGGGCCCTCACCAAACTGGCTTCGTCCCTGGGGCCCCAGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CCA 90 bp CAGAGCAACCGCTCCTCCGCTGGGCGCGCTTCGCTGCTGGGGAGGGACAGGCAGGCTATGCTGTCCAGGTaGCCGTTCATGGTCCGCAGC +
Preference number: 4 (lower is better)
Translates to: QSNRSSAGRASLLGRDRQAMLSR*PFMVRS
Trigger: GCTGCGGACCATGAACGGCCACCTGGACAGCATAGC...CTGCCTGTCCCTCCCCAGCAGCGAAGCGCGCCCAGCGGAGGAGCGGTTGCTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
CDS-3UTR TCA 90 bp GGCCCGCGCTATGCTGTCCAGGTGGCCGTTCATGGTCCGCAGCTCCACCAGGATCTGCCGGGCGGAGTCTaGTGGGCCAACAGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: GPRYAVQVAVHGPQLHQDLPGGV*WANRVW
Trigger: CCAGACTCTGTTGGCCCATCAGACTCCGCCCGGCAG...ATCCTGGTGGAGCTGCGGACCATGAACGGCCACCTGGACAGCATAGCGCGGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR TCA 90 bp GGGCGGCGGGGATGTACCCGCGTCCACGGTGCCCTCCTCCCTGCCCGCAGTGCTCTGCTGCAGAAAATGTaGGGCACTAGGACCAGAGAG +
Preference number: 4 (lower is better)
Translates to: GRRGCTRVHGALLPARSALLQKM*GTRTRE
Trigger: CTCTCTGGTCCTAGTGCCTCACATTTTCTGCAGCAG...AGCACTGCGGGCAGGGAGGAGGGCACCGTGGACGCGGGTACATCCCCGCCGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR TCA 90 bp TGCTTTCCGCTAGGCAGCTGCGCAGAGCAACCGCTCCTCCGCTGGGCGCGCTTCCCTGGGGAAAAGGCCTaGGGCTCGCAGGAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: CFPLGSCAEQPLLRWARFPGEKA*GSQEEE
Trigger: CTCCTCTTCCTGCGAGCCTCAGGCCTTTTCCCCAGG...GAAGCGCGCCCAGCGGAGGAGCGGTTGCTCTGCGCAGCTGCCTAGCGGAAAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
CDS-3UTR GCA 90 bp GGCGGCGGCCGCTCCTTGTCATCCCCGCGTGTGCTGGGAGAGATGGTCGAAGGGTTTGATGAGGCCGACTaGCGGGCGGAGTCTGATGGG +
Preference number: 4 (lower is better)
Translates to: GGGRSLSSPRVLGEMVEGFDEAD*RAESDG
Trigger: CCCATCAGACTCCGCCCGGCAGTCGGCCTCATCAAA...CCCTTCGACCATCTCTCCCAGCACACGCGGGGATGACAAGGAGCGGCCGCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR GCA 90 bp GCTGCGCAGAGCAACCGCTCCTCCGCTGGGCGCGCTTCGCTGCTGGGGAGGGACCAAAACCCGCAAGCCTaGTGGTGGAGCTTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: AAQSNRSSAGRASLLGRDQNPQA*WWSFSL
Trigger: CAAGCTGAAGCTCCACCAGCAGGCTTGCGGGTTTTG...GTCCCTCCCCAGCAGCGAAGCGCGCCCAGCGGAGGAGCGGTTGCTCTGCGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR GCA 90 bp TGTGAACGTCACCAGAGATGGATGCCCCACCAACGCTGGAGCTGGCCTCGCTGCTACCCGCGTCCACGGTaGCCTCCTCCCTGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: CERHQRWMPHQRWSWPRCYPRPR*PPPCPQ
Trigger: CTGCGGGCAGGGAGGAGGGCACCGTGGACGCGGGTA...GCAGCGAGGCCAGCTCCAGCGTTGGTGGGGCATCCATCTCTGGTGACGTTCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR CCA 90 bp CCCGCGCTATGCTGTCCAGGTGGCCGTTCATGGTCCGCAGCTCCACCAGGATGTGCGCCCCCTCCCAGTTaGAGTCCGGTGGTGAAGCGG +
Preference number: 4 (lower is better)
Translates to: PALCCPGGRSWSAAPPGCAPPPS*SPVVKR
Trigger: CCGCTTCACCACCGGACTCCAACTGGGAGGGGGCGC...ACATCCTGGTGGAGCTGCGGACCATGAACGGCCACCTGGACAGCATAGCGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CCA 90 bp CAGAGCAACCGCTCCTCCGCTGGGCGCGCTTCGCTGCTGGGGAGGGACAGGCAGGGGAGTCCAAGGTACTaGGCTCTGAATCCCCATGGG +
Preference number: 4 (lower is better)
Translates to: QSNRSSAGRASLLGRDRQGSPRY*ALNPHG
Trigger: CCCATGGGGATTCAGAGCCCAGTACCTTGGACTCCC...CTGCCTGTCCCTCCCCAGCAGCGAAGCGCGCCCAGCGGAGGAGCGGTTGCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CCA 90 bp TTCGCTGCTGGGGAGGGACAGGCAGGGATGCCTGGTGCAAGCGATCCCTCGGCCACAGGCAGGGATGCCTaGTGCAAGCGATCCCTCGGC +
Preference number: 4 (lower is better)
Translates to: FAAGEGQAGMPGASDPSATGRDA*CKRSLG
Trigger: GCCGAGGGATCGCTTGCACCAGGCATCCCTGCCTGT...GGCCGAGGGATCGCTTGCACCAGGCATCCCTGCCTGTCCCTCCCCAGCAGCGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
CDS-3UTR CCA 90 bp TTCGCTGCTGGGGAGGGACAGGCAGGGATGCCTGGTGCAAGCGATCCCTCGGCCCACCAACGCTGGAGCTaGCCTCGCTGCTGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: FAAGEGQAGMPGASDPSAHQRWS*PRCCFG
Trigger: GCCAAAGCAGCAGCGAGGCCAGCTCCAGCGTTGGTG...GGCCGAGGGATCGCTTGCACCAGGCATCCCTGCCTGTCCCTCCCCAGCAGCGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR TCA 90 bp GGACAGGCAGGGATGCCTGGTGCAAGCGATCCCTCGGCCCCGGGGCGGCCCAGCCTTGGGGAGGATTTGTaGAGACGGTTATGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: GQAGMPGASDPSAPGRPSLGEDL*RRLWSR
Trigger: CCTTGACCATAACCGTCTTCACAAATCCTCCCCAAG...GCTGGGCCGCCCCGGGGCCGAGGGATCGCTTGCACCAGGCATCCCTGCCTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
CDS-3UTR GCA 90 bp TTCGCTGCTGGGGAGGGACAGGCAGGGATGCCTGGTGCAAGCGATCCCTCGGCCTGCTGCTGCTGTTGCTaGTGCTGTTGCGCAGCCACC +
Preference number: 4 (lower is better)
Translates to: FAAGEGQAGMPGASDPSACCCCC*CCCAAT
Trigger: GGTGGCTGCGCAACAGCAGCAGCAACAGCAGCAGCA...GGCCGAGGGATCGCTTGCACCAGGCATCCCTGCCTGTCCCTCCCCAGCAGCGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
CDS-3UTR GCA 90 bp CCGCTAGGCAGCTGCGCAGAGCAACCGCTCCTCCGCTGGGCGCGCTTCGCTGCTGGAGGCGCAGATCTTTaGCGGAGTCTTTGGAACACC +
Preference number: 4 (lower is better)
Translates to: PLGSCAEQPLLRWARFAAGGADL*RSLWNT
Trigger: GGTGTTCCAAAGACTCCGGCAAAGATCTGCGCCTCC...AGCAGCGAAGCGCGCCCAGCGGAGGAGCGGTTGCTCTGCGCAGCTGCCTAGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR GCA 90 bp CTAGGGCCGTGCTTTCCGCTAGGCAGCTGCGCAGAGCAACCGCTCCTCCGCTGGGAAACGCTAGGGCCGTaGTTTCCGCTAGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LGPCFPLGSCAEQPLLRWETLGP*FPLGSC
Trigger: GCAGCTGCCTAGCGGAAAGCACGGCCCTAGCGTTTC...CCAGCGGAGGAGCGGTTGCTCTGCGCAGCTGCCTAGCGGAAAGCACGGCCCTAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
CDS-3UTR GCA 90 bp CCGCTAGGCAGCTGCGCAGAGCAACCGCTCCTCCGCTGGGCGCGCTTCGCTGCTGCTGCTTTGGCGACTTaGTTTGAGCTCCTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: PLGSCAEQPLLRWARFAAAALAT*FELLSL
Trigger: GAGGGAGAGGAGCTCAAAGCAAGTCGCCAAAGCAGC...AGCAGCGAAGCGCGCCCAGCGGAGGAGCGGTTGCTCTGCGCAGCTGCCTAGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR CCA 90 bp GCGGCCGCTCCTTGTCATCCCCGCGTGTGCTGGGAGAGATGGTCGAAGGGCAACCACAAGTTAGCGAAGTaGCCGGGGGAGGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: AAAPCHPRVCWERWSKGNHKLAK*PGEGEE
Trigger: CTCCTCCCCCTCCCCCGGCCACTTCGCTAACTTGTG...GTTGCCCTTCGACCATCTCTCCCAGCACACGCGGGGATGACAAGGAGCGGCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CCA 90 bp CTAGGGCCGTGCTTTCCGCTAGGCAGCTGCGCAGAGCAACCGCTCCTCCGCTGGAGCGGGGTGGTAGAGTaGATGGACGGGGACGTCATC +
Preference number: 4 (lower is better)
Translates to: LGPCFPLGSCAEQPLLRWSGVVE*MDGDVI
Trigger: GATGACGTCCCCGTCCATCCACTCTACCACCCCGCT...CCAGCGGAGGAGCGGTTGCTCTGCGCAGCTGCCTAGCGGAAAGCACGGCCCTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
CDS-3UTR CCA 90 bp AGGGACGAAGCCAGTTTGGTGAGGGCCCGCGCTATGCTGTCCAGGTGGCCGTTCTGGGCCAACAGAGTCTaGCGATGCGGCGCAGTCGGG +
Preference number: 4 (lower is better)
Translates to: RDEASLVRARAMLSRWPFWANRV*RCGAVG
Trigger: CCCGACTGCGCCGCATCGCCAGACTCTGTTGGCCCA...GAACGGCCACCTGGACAGCATAGCGCGGGCCCTCACCAAACTGGCTTCGTCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CCA 90 bp CCGCTAGGCAGCTGCGCAGAGCAACCGCTCCTCCGCTGGGCGCGCTTCGCTGCTAACCCGCAAGCCTGCTaGTGGAGCTTCAGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: PLGSCAEQPLLRWARFAANPQAC*WSFSLS
Trigger: TGACAAGCTGAAGCTCCACCAGCAGGCTTGCGGGTT...AGCAGCGAAGCGCGCCCAGCGGAGGAGCGGTTGCTCTGCGCAGCTGCCTAGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CCA 90 bp CGAAGCCAGTTTGGTGAGGGCCCGCGCTATGCTGTCCAGGTGGCCGTTCATGGTGGCGGTGGAGGGGCCTaGCTCCTCCGAGGAGAGGAA +
Preference number: 4 (lower is better)
Translates to: RSQFGEGPRYAVQVAVHGGGGGA*LLRGEE
Trigger: TTCCTCTCCTCGGAGGAGCCAGGCCCCTCCACCGCC...ACCATGAACGGCCACCTGGACAGCATAGCGCGGGCCCTCACCAAACTGGCTTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CCA 90 bp TGTGAACGTCACCAGAGATGGATGCCCCACCAACGCTGGAGCTGGCCTCGCTGCCAGCGGAGGCAGCGCTaGCGGACCTGGGGAAAAGGC +
Preference number: 4 (lower is better)
Translates to: CERHQRWMPHQRWSWPRCQRRQR*RTWGKG
Trigger: GCCTTTTCCCCAGGTCCGCCAGCGCTGCCTCCGCTG...GCAGCGAGGCCAGCTCCAGCGTTGGTGGGGCATCCATCTCTGGTGACGTTCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR CCA 90 bp TTCGCTGCTGGGGAGGGACAGGCAGGGATGCCTGGTGCAAGCGATCCCTCGGCCGTGTGCTGGGAGAGATaGTCGAAGGGCAACCGGGGA +
Preference number: 4 (lower is better)
Translates to: FAAGEGQAGMPGASDPSAVCWER*SKGNRG
Trigger: TCCCCGGTTGCCCTTCGACCATCTCTCCCAGCACAC...GGCCGAGGGATCGCTTGCACCAGGCATCCCTGCCTGTCCCTCCCCAGCAGCGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
CDS-3UTR TCA 90 bp GTGAAAGAGTGTTTCTCTAAGCATCCTTCGCAGGGTGCCACCGCCGTTTCCAGGGGGCAGGGGCCGCCGTaGGAGAGCGGAGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: VKECFSKHPSQGATAVSRGQGPP*ESGGGG
Trigger: CCCTCCTCCTCCGCTCTCTCACGGCGGCCCCTGCCC...CCTGGAAACGGCGGTGGCACCCTGCGAAGGATGCTTAGAGAAACACTCTTTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR GCA 90 bp CCTGGCTCCTCCGAGGAGAGGAACAAGGTGGTCGAAGACTGGGAGTCCAAGGTATACCCGCGTCCACGGTaGCCTCCTCCCTGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: PGSSEERNKVVEDWESKVYPRPR*PPPCPQ
Trigger: CTGCGGGCAGGGAGGAGGGCACCGTGGACGCGGGTA...TACCTTGGACTCCCAGTCTTCGACCACCTTGTTCCTCTCCTCGGAGGAGCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR GCA 90 bp GGCCCGCGCTATGCTGTCCAGGTGGCCGTTCATGGTCCGCAGCTCCACCAGGATAGGGACAGGCAGGGATaGCTGGTGCAAGCGATCCCT +
Preference number: 4 (lower is better)
Translates to: GPRYAVQVAVHGPQLHQDRDRQG*LVQAIP
Trigger: AGGGATCGCTTGCACCAGGCATCCCTGCCTGTCCCT...ATCCTGGTGGAGCTGCGGACCATGAACGGCCACCTGGACAGCATAGCGCGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CCA 90 bp CCCGCGTGTGCTGGGAGAGATGGTCGAAGGGCAACCGGGGAGCCAGTCGACCAGCCTGCCTGGGGTTTCTaGGTTCCCGAGGTCCATCTA +
Preference number: 4 (lower is better)
Translates to: PACAGRDGRRATGEPVDQPAWGF*VPEVHL
Trigger: TAGATGGACCTCGGGAACCCAGAAACCCCAGGCAGG...CTGGTCGACTGGCTCCCCGGTTGCCCTTCGACCATCTCTCCCAGCACACGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CCA 90 bp AGGGCCGTGCTTTCCGCTAGGCAGCTGCGCAGAGCAACCGCTCCTCCGCTGGGCGGCTCTGAATCCCCATaGGAGTCCATCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RAVLSARQLRRATAPPLGGSESP*ESICCR
Trigger: TCTGCAGCAGATGGACTCCCATGGGGATTCAGAGCC...GCCCAGCGGAGGAGCGGTTGCTCTGCGCAGCTGCCTAGCGGAAAGCACGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CCA 90 bp CCCGCGCTATGCTGTCCAGGTGGCCGTTCATGGTCCGCAGCTCCACCAGGATGTCCAGGTGGCCGTTCATaGTCCGCAGCTCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: PALCCPGGRSWSAAPPGCPGGRS*SAAPPG
Trigger: TCCTGGTGGAGCTGCGGACCATGAACGGCCACCTGG...ACATCCTGGTGGAGCTGCGGACCATGAACGGCCACCTGGACAGCATAGCGCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR TCA 90 bp CTAGGCAGCTGCGCAGAGCAACCGCTCCTCCGCTGGGCGCGCTTCGCTGCTGGGATGGTGTCACTGTGCTaGAGAGGCTGTTTGATGCCA +
Preference number: 4 (lower is better)
Translates to: LGSCAEQPLLRWARFAAGMVSLC*RGCLMP
Trigger: TGGCATCAAACAGCCTCTTCAGCACAGTGACACCAT...CCCAGCAGCGAAGCGCGCCCAGCGGAGGAGCGGTTGCTCTGCGCAGCTGCCTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR GCA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATACCCGGGGTGGCAGCTaGGAACGGGCGCGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNTRGGS*ERARGC
Trigger: ACACCCCCGCGCCCGTTCGCAGCTGCCACCCCGGGT...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR CCA 90 bp CCCGCGTGTGCTGGGAGAGATGGTCGAAGGGCAACCGGGGAGCCAGTCGACCAGCTTGAGTTTGCAGCTTaGAATGGGGTCCCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: PACAGRDGRRATGEPVDQLEFAA*NGVPWG
Trigger: GCCCCAAGGGACCCCATTCCAAGCTGCAAACTCAAG...CTGGTCGACTGGCTCCCCGGTTGCCCTTCGACCATCTCTCCCAGCACACGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CCA 90 bp CGAAGCCAGTTTGGTGAGGGCCCGCGCTATGCTGTCCAGGTGGCCGTTCATGGTCATCCCCGCGTGTGCTaGGAGAGATGGTCGAAGGGC +
Preference number: 4 (lower is better)
Translates to: RSQFGEGPRYAVQVAVHGHPRVC*ERWSKG
Trigger: GCCCTTCGACCATCTCTCCCAGCACACGCGGGGATG...ACCATGAACGGCCACCTGGACAGCATAGCGCGGGCCCTCACCAAACTGGCTTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CCA 90 bp CGTCACCAGAGATGGATGCCCCACCAACGCTGGAGCTGGCCTCGCTGCTGCTTTGGCATCCGAAACATCTaGCAGGGGCTCAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RHQRWMPHQRWSWPRCCFGIRNI*QGLRLG
Trigger: CCCCAGCCTGAGCCCCTGCCAGATGTTTCGGATGCC...AAAGCAGCAGCGAGGCCAGCTCCAGCGTTGGTGGGGCATCCATCTCTGGTGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR CCA 90 bp TCCCTCGGCCCCGGGGCGGCCCAGCCTCGCCGAGCTCCATTAGTTGGCATCCGACCGAGCTCCATTAGTTaGCATCCGAAACATCTGGCA +
Preference number: 4 (lower is better)
Translates to: SLGPGAAQPRRAPLVGIRPSSIS*HPKHLA
Trigger: TGCCAGATGTTTCGGATGCCAACTAATGGAGCTCGG...TCGGATGCCAACTAATGGAGCTCGGCGAGGCTGGGCCGCCCCGGGGCCGAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CCA 90 bp TGCGCAGAGCAACCGCTCCTCCGCTGGGCGCGCTTCGCTGCTGGGGAGGGACAGCCGAGCTCCATTAGTTaGCATCCGAAACATCTGGCA +
Preference number: 4 (lower is better)
Translates to: CAEQPLLRWARFAAGEGQPSSIS*HPKHLA
Trigger: TGCCAGATGTTTCGGATGCCAACTAATGGAGCTCGG...CTGTCCCTCCCCAGCAGCGAAGCGCGCCCAGCGGAGGAGCGGTTGCTCTGCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
CDS-3UTR TCA 90 bp AGGGCCGTGCTTTCCGCTAGGCAGCTGCGCAGAGCAACCGCTCCTCCGCTGGGCCTTGGGGAGGATTTGTaGAGACGGTTATGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: RAVLSARQLRRATAPPLGLGEDL*RRLWSR
Trigger: CCTTGACCATAACCGTCTTCACAAATCCTCCCCAAG...GCCCAGCGGAGGAGCGGTTGCTCTGCGCAGCTGCCTAGCGGAAAGCACGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
CDS-3UTR TCA 90 bp CCGCTAGGCAGCTGCGCAGAGCAACCGCTCCTCCGCTGGGCGCGCTTCGCTGCTACTCTCATACTGGGATaGGGAATGCGCCCTAAATCA +
Preference number: 4 (lower is better)
Translates to: PLGSCAEQPLLRWARFAATLILG*GMRPKS
Trigger: TGATTTAGGGCGCATTCCTCATCCCAGTATGAGAGT...AGCAGCGAAGCGCGCCCAGCGGAGGAGCGGTTGCTCTGCGCAGCTGCCTAGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR TCA 90 bp CTAGGCAGCTGCGCAGAGCAACCGCTCCTCCGCTGGGCGCGCTTCGCTGCTGGGCGCAGGAATGGGATGTaGAAGAGTGTTTCTCTAAGC +
Preference number: 4 (lower is better)
Translates to: LGSCAEQPLLRWARFAAGRRNGM*KSVSLS
Trigger: GCTTAGAGAAACACTCTTTCACATCCCATTCCTGCG...CCCAGCAGCGAAGCGCGCCCAGCGGAGGAGCGGTTGCTCTGCGCAGCTGCCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR CCA 90 bp GCGGCCGCTCCTTGTCATCCCCGCGTGTGCTGGGAGAGATGGTCGAAGGGCAACAACCACAGTCCCATCTaGTACCTCTCCGAGGGCTAC +
Preference number: 4 (lower is better)
Translates to: AAAPCHPRVCWERWSKGNNHSPI*YLSEGY
Trigger: GTAGCCCTCGGAGAGGTACCAGATGGGACTGTGGTT...GTTGCCCTTCGACCATCTCTCCCAGCACACGCGGGGATGACAAGGAGCGGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CCA 90 bp AAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTGCGTTCAGGGAGGGCCGTaGGTTCTGAGGCGGGACACC +
Preference number: 4 (lower is better)
Translates to: KAVCRSPWAICPLSSATCVQGGP*VLRRDT
Trigger: GGTGTCCCGCCTCAGAACCCACGGCCCTCCCTGAAC...GCAGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp GGGAGGGACAGGCAGGGATGCCTGGTGCAAGCGATCCCTCGGCCCCGGGGCGGCCAAATCTCAGATCGTTaGACCTTGCTACTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: GRDRQGCLVQAIPRPRGGQISDR*TLLLGF
Trigger: AAAACCAAGTAGCAAGGTTCAACGATCTGAGATTTG...GCCGCCCCGGGGCCGAGGGATCGCTTGCACCAGGCATCCCTGCCTGTCCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
CDS-3UTR TCA 90 bp AAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTGCACCGAGGGACATGCCTaGGGTGACTGGCGGGGTGTA +
Preference number: 4 (lower is better)
Translates to: KAVCRSPWAICPLSSATCTEGHA*GDWRGV
Trigger: TACACCCCGCCAGTCACCTCAGGCATGTCCCTCGGT...GCAGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CCTGGCTCCTCCGAGGAGAGGAACAAGGTGGTCGAAGACTGGGAGTCCAAGGTACCTGGGGAAAAGGCCTaGGGCTCGCAGGAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: PGSSEERNKVVEDWESKVPGEKA*GSQEEE
Trigger: CTCCTCTTCCTGCGAGCCTCAGGCCTTTTCCCCAGG...TACCTTGGACTCCCAGTCTTCGACCACCTTGTTCCTCTCCTCGGAGGAGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR TCA 90 bp TGTGAACGTCACCAGAGATGGATGCCCCACCAACGCTGGAGCTGGCCTCGCTGCGGGTCTGTTTCACGCTaGAACGCTAGGGCCGTGCTT +
Preference number: 4 (lower is better)
Translates to: CERHQRWMPHQRWSWPRCGSVSR*NARAVL
Trigger: AAGCACGGCCCTAGCGTTTCAGCGTGAAACAGACCC...GCAGCGAGGCCAGCTCCAGCGTTGGTGGGGCATCCATCTCTGGTGACGTTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR GCA 90 bp AAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTGCTGTTGCTGCTGCTGTTaGGCAGCCACCACCGGGCTC +
Preference number: 4 (lower is better)
Translates to: KAVCRSPWAICPLSSATCCCCCC*AATTGL
Trigger: GAGCCCGGTGGTGGCTGCGCAACAGCAGCAGCAACA...GCAGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATGCCGCCGCCTCCTGCTaGTGCTGCTGCTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNAAASC*CCCCCC
Trigger: GCAGCAACAGCAGCAGCAGCAGCAGGAGGCGGCGGC...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp GAAGCACCTGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGCAGAAGTCAGCCGCCGCCTCCTGCTaGTGCTGCTGCTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: EAPAWLFLLRVEGQRQKSAAASC*CCCCCC
Trigger: GCAGCAACAGCAGCAGCAGCAGCAGGAGGCGGCGGC...TGACTTCTGCCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCAGGTGCTTC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR GCA 90 bp CGTCACCAGAGATGGATGCCCCACCAACGCTGGAGCTGGCCTCGCTGCTGCTTTTGTCATCCCCGCGTGTaGTGGGAGAGATGGTCGAAG +
Preference number: 4 (lower is better)
Translates to: RHQRWMPHQRWSWPRCCFCHPRV*WERWSK
Trigger: CTTCGACCATCTCTCCCAGCACACGCGGGGATGACA...AAAGCAGCAGCGAGGCCAGCTCCAGCGTTGGTGGGGCATCCATCTCTGGTGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR CCA 90 bp AAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTGCCACAAGTTAGCGAAGTaGCCGGGGGAGGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: KAVCRSPWAICPLSSATCHKLAK*PGEGEE
Trigger: CTCCTCCCCCTCCCCCGGCCACTTCGCTAACTTGTG...GCAGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359524.7
ENST00000646519.1
CDS-3UTR CCA 90 bp AAAGGTGGGTTTGAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCATGGTGCGGTTGTCGTaGGGCGGCCGCAACCGGGGC +
Preference number: 4 (lower is better)
Translates to: KGGFEKDQRTRGPLGFEGMVRLS*GGRNRG
Trigger: GCCCCGGTTGCGGCCGCCCCACGACAACCGCACCAT...GCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTCAAACCCACCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CCCAGTTCTGAAGCACCTGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGGTTCAGGGAGGGCCGTaGGTTCTGAGGCGGGACACC +
Preference number: 4 (lower is better)
Translates to: PSSEAPAWLFLLRVEGQRVQGGP*VLRRDT
Trigger: GGTGTCCCGCCTCAGAACCCACGGCCCTCCCTGAAC...CCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCAGGTGCTTCAGAACTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483377.5
ENST00000646519.1
CDS-3UTR CCA 90 bp GAAGCACCTGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGCAGAAGTCAGCGCCCCCTCCCAGTTaGAGTCCGGTGGTGAAGCGG +
Preference number: 4 (lower is better)
Translates to: EAPAWLFLLRVEGQRQKSAPPPS*SPVVKR
Trigger: CCGCTTCACCACCGGACTCCAACTGGGAGGGGGCGC...TGACTTCTGCCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCAGGTGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR CCA 90 bp TCGAAGACTGGGAGTCCAAGGTACTGGGCTCTGAATCCCCATGGGAGTCCATCTTTGGAACACCCGGGGTaGCAGCTGCGAACGGGCGCG +
Preference number: 4 (lower is better)
Translates to: SKTGSPRYWALNPHGSPSLEHPG*QLRTGA
Trigger: CGCGCCCGTTCGCAGCTGCCACCCCGGGTGTTCCAA...AGATGGACTCCCATGGGGATTCAGAGCCCAGTACCTTGGACTCCCAGTCTTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CCA 90 bp TGGCTCCTCCGAGGAGAGGAACAAGGTGGTCGAAGACTGGGAGTCCAAGGTACTAGGATGTCCCCGACGTaGGCCTCCAAGCTCGCCGCA +
Preference number: 4 (lower is better)
Translates to: WLLRGEEQGGRRLGVQGTRMSPT*ASKLAA
Trigger: TGCGGCGAGCTTGGAGGCCCACGTCGGGGACATCCT...AGTACCTTGGACTCCCAGTCTTCGACCACCTTGTTCCTCTCCTCGGAGGAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CCA 90 bp TGTGAACGTCACCAGAGATGGATGCCCCACCAACGCTGGAGCTGGCCTCGCTGCGCCTCGCTGCTGCTTTaGCGACTTGCTTTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: CERHQRWMPHQRWSWPRCASLLL*RLALSS
Trigger: GGAGCTCAAAGCAAGTCGCCAAAGCAGCAGCGAGGC...GCAGCGAGGCCAGCTCCAGCGTTGGTGGGGCATCCATCTCTGGTGACGTTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR TCA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGCGAGGGCTACCACCTTaGAGGCCACGGGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLRRGLPP*RPRAGS
Trigger: AGACCCTGCCCGTGGCCTTCAAGGTGGTAGCCCTCG...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGGAGGGCCGTGGGTTCTaGGGCGGGACACCTACTCTC +
Preference number: 4 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLREGRGF*GGTPTL
Trigger: GAGAGTAGGTGTCCCGCCTCAGAACCCACGGCCCTC...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CAAAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTACCGAGGGACATGCCTaGGGTGACTGGCGGGGTGTA +
Preference number: 4 (lower is better)
Translates to: QRLSVGPRGPYVLSAQLPTEGHA*GDWRGV
Trigger: TACACCCCGCCAGTCACCTCAGGCATGTCCCTCGGT...AGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp GTGAAAGAGTGTTTCTCTAAGCATCCTTCGCAGGGTGCCACCGCCGTTTCCAGGCGGAGGAGGAGGGTGTaGGGCGCAACCGGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: VKECFSKHPSQGATAVSRRRRRV*GATGSV
Trigger: AACAGACCCGGTTGCGCCTCACACCCTCCTCCTCCG...CCTGGAAACGGCGGTGGCACCCTGCGAAGGATGCTTAGAGAAACACTCTTTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR GCA 90 bp ATCCTTCGCAGGGTGCCACCGCCGTTTCCAGGCACTTTTTCTGCTAGACGCTCATGGCAGGAAGCCCAGTaGCCCGTGTGGAAGACAGCG +
Preference number: 4 (lower is better)
Translates to: ILRRVPPPFPGTFSARRSWQEAQ*PVWKTA
Trigger: CGCTGTCTTCCACACGGGGCACTGGGCTTCCTGCCA...TGAGCGTCTAGCAGAAAAAGTGCCTGGAAACGGCGGTGGCACCCTGCGAAGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR GCA 90 bp AAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTGCCCCCACACGCTGTCCTaGAATGCTGGGTGGCCTACA +
Preference number: 4 (lower is better)
Translates to: KAVCRSPWAICPLSSATCPHTLS*NAGWPT
Trigger: TGTAGGCCACCCAGCATTGCAGGACAGCGTGTGGGG...GCAGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp CCGCTAGGCAGCTGCGCAGAGCAACCGCTCCTCCGCTGGGCGCGCTTCGCTGCTCAGAGAGCCCTTTCCTaGTATTTGCTTGAGAAACAA +
Preference number: 4 (lower is better)
Translates to: PLGSCAEQPLLRWARFAAQRALS*YLLEKQ
Trigger: TTGTTTCTCAAGCAAATAGCAGGAAAGGGCTCTCTG...AGCAGCGAAGCGCGCCCAGCGGAGGAGCGGTTGCTCTGCGCAGCTGCCTAGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CCA 90 bp CAAAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTACGAGTTCGGCCGGGTaGTCGGCGATGATCTCCACC +
Preference number: 4 (lower is better)
Translates to: QRLSVGPRGPYVLSAQLPTSSAG*SAMIST
Trigger: GGTGGAGATCATCGCCGACCACCCGGCCGAACTCGT...AGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TTCGCTGCTGGGGAGGGACAGGCAGGGATGCCTGGTGCAAGCGATCCCTCGGCCTGGATTAAAAGGACTTaGTGCAGAGTTCAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: FAAGEGQAGMPGASDPSAWIKRT*CRVQGG
Trigger: CCCTCCCTGAACTCTGCACCAAGTCCTTTTAATCCA...GGCCGAGGGATCGCTTGCACCAGGCATCCCTGCCTGTCCCTCCCCAGCAGCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR CCA 90 bp AAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTGCAGCGGGGTGGTAGAGTaGATGGACGGGGACGTCATC +
Preference number: 4 (lower is better)
Translates to: KAVCRSPWAICPLSSATCSGVVE*MDGDVI
Trigger: GATGACGTCCCCGTCCATCCACTCTACCACCCCGCT...GCAGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CCCGCGCTATGCTGTCCAGGTGGCCGTTCATGGTCCGCAGCTCCACCAGGATGTAGGAGAGGAACAAGGTaGTCGAAGACTGGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: PALCCPGGRSWSAAPPGCRRGTR*SKTGSP
Trigger: TGGACTCCCAGTCTTCGACCACCTTGTTCCTCTCCT...ACATCCTGGTGGAGCTGCGGACCATGAACGGCCACCTGGACAGCATAGCGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CCA 90 bp ATCCTTCGCAGGGTGCCACCGCCGTTTCCAGGCACTTTTTCTGCTAGACGCTCACATCCCCGCGTGTGCTaGGAGAGATGGTCGAAGGGC +
Preference number: 4 (lower is better)
Translates to: ILRRVPPPFPGTFSARRSHPRVC*ERWSKG
Trigger: GCCCTTCGACCATCTCTCCCAGCACACGCGGGGATG...TGAGCGTCTAGCAGAAAAAGTGCCTGGAAACGGCGGTGGCACCCTGCGAAGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR TCA 90 bp TGTGAACGTCACCAGAGATGGATGCCCCACCAACGCTGGAGCTGGCCTCGCTGCCGGTTATGGTCAAGGTaGAACTCTTGCCTCGTCCAC +
Preference number: 4 (lower is better)
Translates to: CERHQRWMPHQRWSWPRCRLWSR*NSCLVH
Trigger: GTGGACGAGGCAAGAGTTTCACCTTGACCATAACCG...GCAGCGAGGCCAGCTCCAGCGTTGGTGGGGCATCCATCTCTGGTGACGTTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR TCA 90 bp AACGTCACCAGAGATGGATGCCCCACCAACGCTGGAGCTGGCCTCGCTGCTGCTTGCGCCCTAAATCACTaGGGCGGTCAGAGAACAAAC +
Preference number: 4 (lower is better)
Translates to: NVTRDGCPTNAGAGLAAACALNH*GGQRTN
Trigger: GTTTGTTCTCTGACCGCCTCAGTGATTTAGGGCGCA...AGCAGCAGCGAGGCCAGCTCCAGCGTTGGTGGGGCATCCATCTCTGGTGACGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR TCA 90 bp AAAGGTGGGTTTGAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCGAGGGCCGTGGGTTCTaGGGCGGGACACCTACTCTC +
Preference number: 4 (lower is better)
Translates to: KGGFEKDQRTRGPLGFEGEGRGF*GGTPTL
Trigger: GAGAGTAGGTGTCCCGCCTCAGAACCCACGGCCCTC...GCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTCAAACCCACCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp TCAGAGGTGGCAGTGTCATCATCTGAAATGCGCCTAGGCACATCGGTGATGGCAGAGGGCCGTGGGTTCTaGGGCGGGACACCTACTCTC +
Preference number: 4 (lower is better)
Translates to: SEVAVSSSEMRLGTSVMAEGRGF*GGTPTL
Trigger: GAGAGTAGGTGTCCCGCCTCAGAACCCACGGCCCTC...TGCCATCACCGATGTGCCTAGGCGCATTTCAGATGATGACACTGCCACCTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR TCA 90 bp CTCTGTCCTTGTGGATTAAAAGGACTTGGTGCAGAGTTCAGGGAGGGCCGTGGGACCGAGGGACATGCCTaGGGTGACTGGCGGGGTGTA +
Preference number: 4 (lower is better)
Translates to: LCPCGLKGLGAEFREGRGTEGHA*GDWRGV
Trigger: TACACCCCGCCAGTCACCTCAGGCATGTCCCTCGGT...CCCACGGCCCTCCCTGAACTCTGCACCAAGTCCTTTTAATCCACAAGGACAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR TCA 90 bp AAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTGCTGCTCTTCTCCCTCCTaGACCTGGAGTCCACCTCTC +
Preference number: 4 (lower is better)
Translates to: KAVCRSPWAICPLSSATCCSSPS*TWSPPL
Trigger: GAGAGGTGGACTCCAGGTTCAGGAGGGAGAAGAGCA...GCAGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp AAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTGCAAGGGCTCTGGCAAGTaGGAGGCAGTGAGACCGTCT +
Preference number: 4 (lower is better)
Translates to: KAVCRSPWAICPLSSATCKGSGK*EAVRPS
Trigger: AGACGGTCTCACTGCCTCTCACTTGCCAGAGCCCTT...GCAGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATTGTTGCTGCTGCTGTTaGGCAGCCACCACCGGGCTC +
Preference number: 4 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNCCCCC*AATTGL
Trigger: GAGCCCGGTGGTGGCTGCGCAACAGCAGCAGCAACA...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATTGGCAGGAAGCCCAGTaGCCCGTGTGGAAGACAGCG +
Preference number: 4 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNWQEAQ*PVWKTA
Trigger: CGCTGTCTTCCACACGGGGCACTGGGCTTCCTGCCA...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp CAAAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTCCCCACACGCTGTCCTaGAATGCTGGGTGGCCTACA +
Preference number: 4 (lower is better)
Translates to: QRLSVGPRGPYVLSAQLPPHTLS*NAGWPT
Trigger: TGTAGGCCACCCAGCATTGCAGGACAGCGTGTGGGG...AGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp AAAGAGTGTTTCTCTAAGCATCCTTCGCAGGGTGCCACCGCCGTTTCCAGGCACGCATCCTTCGCAGGGTaGCACCGCCGTTTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: KECFSKHPSQGATAVSRHASFAG*HRRFQA
Trigger: TGCCTGGAAACGGCGGTGGCACCCTGCGAAGGATGC...GTGCCTGGAAACGGCGGTGGCACCCTGCGAAGGATGCTTAGAGAAACACTCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR CCA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATACGAGTTCGGCCGGGTaGTCGGCGATGATCTCCACC +
Preference number: 4 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNTSSAG*SAMIST
Trigger: GGTGGAGATCATCGCCGACCACCCGGCCGAACTCGT...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AACGTCACCAGAGATGGATGCCCCACCAACGCTGGAGCTGGCCTCGCTGCTGCTTCTGTCTGTGCCTTCTaGGTTCCCGAGGTCCATCTA +
Preference number: 4 (lower is better)
Translates to: NVTRDGCPTNAGAGLAAASVCAF*VPEVHL
Trigger: TAGATGGACCTCGGGAACCCAGAAGGCACAGACAGA...AGCAGCAGCGAGGCCAGCTCCAGCGTTGGTGGGGCATCCATCTCTGGTGACGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR CCA 90 bp CTAGGGCCGTGCTTTCCGCTAGGCAGCTGCGCAGAGCAACCGCTCCTCCGCTGGCTGACTCTGTCCTTGTaGATTAAAAGGACTTGGTGC +
Preference number: 4 (lower is better)
Translates to: LGPCFPLGSCAEQPLLRWLTLSL*IKRTWC
Trigger: GCACCAAGTCCTTTTAATCCACAAGGACAGAGTCAG...CCAGCGGAGGAGCGGTTGCTCTGCGCAGCTGCCTAGCGGAAAGCACGGCCCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR CCA 90 bp AATGCGCCTAGGCACATCGGTGATGGCAGGAAGCCCAGTGCCCCGTGTGGAAGATGCTTGGGAACTGCCTaGGGTCTGAAAAAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: NAPRHIGDGRKPSAPCGRCLGTA*GLKKGP
Trigger: TGGGCCCTTTTTCAGACCCCAGGCAGTTCCCAAGCA...TCTTCCACACGGGGCACTGGGCTTCCTGCCATCACCGATGTGCCTAGGCGCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR CCA 90 bp GTAGAGATATGGAGTGCTGCTGGTCTGGAAGGGTCCACTCTGGCTTTGGGAAGAGGGGTGTGTTTGGCCTaGGGAGGCGGGGGACTTGAG +
Preference number: 4 (lower is better)
Translates to: VEIWSAAGLEGSTLALGRGVCLA*GGGGLE
Trigger: CTCAAGTCCCCCGCCTCCCCAGGCCAAACACACCCC...TCTTCCCAAAGCCAGAGTGGACCCTTCCAGACCAGCAGCACTCCATATCTCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR CCA 90 bp ACTAGGACCAGAGAGCCCTTTCCTGCTATTTGCTTGAGAAACAAAGCCTTCCCTATGGCAGGGCGGCGGTaGAGGGGCCTGGCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: TRTREPFPAICLRNKAFPMAGRR*RGLAPP
Trigger: CGGAGGAGCCAGGCCCCTCCACCGCCGCCCTGCCAT...AGGGAAGGCTTTGTTTCTCAAGCAAATAGCAGGAAAGGGCTCTCTGGTCCTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CCA 90 bp GATGTGAAAGAGTGTTTCTCTAAGCATCCTTCGCAGGGTGCCACCGCCGTTTCCAGGATGTCCCCGACGTaGGCCTCCAAGCTCGCCGCA +
Preference number: 4 (lower is better)
Translates to: DVKECFSKHPSQGATAVSRMSPT*ASKLAA
Trigger: TGCGGCGAGCTTGGAGGCCCACGTCGGGGACATCCT...GGAAACGGCGGTGGCACCCTGCGAAGGATGCTTAGAGAAACACTCTTTCACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR TCA 90 bp CAAAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTCCTGGCTCTTCTTACTaGGAGTGGAAGGCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: QRLSVGPRGPYVLSAQLPPGSSY*EWKARG
Trigger: GCCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGG...AGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359524.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CCCAGTTCTGAAGCACCTGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGCCTCAACTGGTTTTGTaGGCTGTCTGCGGAGGGCAC +
Preference number: 4 (lower is better)
Translates to: PSSEAPAWLFLLRVEGQRPQLVL*AVCGGH
Trigger: GTGCCCTCCGCAGACAGCTCACAAAACCAGTTGAGG...CCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCAGGTGCTTCAGAACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR TCA 90 bp CAAAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTCCAATGAAGGGACCCTaGCTTTTCGGGGAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: QRLSVGPRGPYVLSAQLPPMKGP*LFGEES
Trigger: GCTCTCCTCCCCGAAAAGTCAGGGTCCCTTCATTGG...AGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGTCACGTCGCTCATTTTaGCGGGCTGCAGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLRSRRSF*RAAGCW
Trigger: CCAGCAGCCTGCAGCCCGGCAAAATGAGCGACGTGA...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATTGCTGCTGTTGCTGCTaGTGTTGCGCAGCCACCACC +
Preference number: 4 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNCCCCC*CCAATT
Trigger: GGTGGTGGCTGCGCAACAGCAGCAGCAACAGCAGCA...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGTGCTGCTGCTGTTGCTaGTGCTGTTGCGCAGCCACC +
Preference number: 4 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLRCCCCC*CCCAAT
Trigger: GGTGGCTGCGCAACAGCAGCAGCAACAGCAGCAGCA...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp TCTGAAGCACCTGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGCAGAAGTGCTGCTGCTGTTGCTaGTGCTGTTGCGCAGCCACC +
Preference number: 4 (lower is better)
Translates to: SEAPAWLFLLRVEGQRQKCCCCC*CCCAAT
Trigger: GGTGGCTGCGCAACAGCAGCAGCAACAGCAGCAGCA...CTTCTGCCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCAGGTGCTTCAGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR GCA 90 bp TGTGAACGTCACCAGAGATGGATGCCCCACCAACGCTGGAGCTGGCCTCGCTGCATTAAAAGGACTTGGTaGAGAGTTCAGGGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: CERHQRWMPHQRWSWPRCIKRTW*RVQGGP
Trigger: CGGCCCTCCCTGAACTCTGCACCAAGTCCTTTTAAT...GCAGCGAGGCCAGCTCCAGCGTTGGTGGGGCATCCATCTCTGGTGACGTTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR GCA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATCGGCGGGGAAGACTGTaGCTGCCTGGGGTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNRRGRL*LPGVCN
Trigger: ATTACAGACCCCAGGCAGGCACAGTCTTCCCCGCCG...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp GTGGCAGTGTCATCATCTGAAATGCGCCTAGGCACATCGGTGATGGCAGGAAGCCGGCGGGGAAGACTGTaGCTGCCTGGGGTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: VAVSSSEMRLGTSVMAGSRRGRL*LPGVCN
Trigger: ATTACAGACCCCAGGCAGGCACAGTCTTCCCCGCCG...GCTTCCTGCCATCACCGATGTGCCTAGGCGCATTTCAGATGATGACACTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR GCA 90 bp ATCCTTCGCAGGGTGCCACCGCCGTTTCCAGGCACTTTTTCTGCTAGACGCTCAGTCACCAGAGATGGATaGCCCACCAACGCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: ILRRVPPPFPGTFSARRSVTRDG*PTNAGA
Trigger: AGCTCCAGCGTTGGTGGGGCATCCATCTCTGGTGAC...TGAGCGTCTAGCAGAAAAAGTGCCTGGAAACGGCGGTGGCACCCTGCGAAGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR CCA 90 bp GATGTGAAAGAGTGTTTCTCTAAGCATCCTTCGCAGGGTGCCACCGCCGTTTCCACGAGTTCGGCCGGGTaGTCGGCGATGATCTCCACC +
Preference number: 4 (lower is better)
Translates to: DVKECFSKHPSQGATAVSTSSAG*SAMIST
Trigger: GGTGGAGATCATCGCCGACCACCCGGCCGAACTCGT...GGAAACGGCGGTGGCACCCTGCGAAGGATGCTTAGAGAAACACTCTTTCACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR CCA 90 bp CAAAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTAGGTGTGGTAGTGAGTaGTGGCGGACATACCGAGGG +
Preference number: 4 (lower is better)
Translates to: QRLSVGPRGPYVLSAQLPRCGSE*WRTYRG
Trigger: CCCTCGGTATGTCCGCCACCACTCACTACCACACCT...AGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGTGGAAGGGTCCACTCTaGCTTTGGGAAGAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLRWKGPL*LWEEPG
Trigger: CCCCGGCTCTTCCCAAAGCCAGAGTGGACCCTTCCA...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TCTGAAGCACCTGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGCAGAAGTGGAAGGGTCCACTCTaGCTTTGGGAAGAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: SEAPAWLFLLRVEGQRQKWKGPL*LWEEPG
Trigger: CCCCGGCTCTTCCCAAAGCCAGAGTGGACCCTTCCA...CTTCTGCCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCAGGTGCTTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483377.5
ENST00000646519.1
CDS-3UTR CCA 90 bp CCCAGTTCTGAAGCACCTGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGCGAGGTGGTGGTGCATaGCGGAAGCATTCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: PSSEAPAWLFLLRVEGQRRGGGA*RKHSGR
Trigger: CCTTCCAGAATGCTTCCGCCATGCACCACCACCTCG...CCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCAGGTGCTTCAGAACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483377.5
ENST00000646519.1
CDS-3UTR CCA 90 bp CAAAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTGATACGTGTGGGATGTaGCCCCCAGATACCACTGGG +
Preference number: 4 (lower is better)
Translates to: QRLSVGPRGPYVLSAQLPDTCGM*PPDTTG
Trigger: CCCAGTGGTATCTGGGGGCCACATCCCACACGTATC...AGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATGTCTGCGGAGGGCACTaGTCCATACACAGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNVCGGH*SIHSCH
Trigger: GTGGCAGCTGTGTATGGACCAGTGCCCTCCGCAGAC...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp GGGTGTGAGGCGCAACCGGGTCTGTTTCACGCTGAAACGCTAGGGCCGTGCTTTAGGAGAGGAACAAGGTaGTCGAAGACTGGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: GCEAQPGLFHAETLGPCFRRGTR*SKTGSP
Trigger: TGGACTCCCAGTCTTCGACCACCTTGTTCCTCTCCT...AAAGCACGGCCCTAGCGTTTCAGCGTGAAACAGACCCGGTTGCGCCTCACACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR CCA 90 bp AAAGAGTGTTTCTCTAAGCATCCTTCGCAGGGTGCCACCGCCGTTTCCAGGCACGTGTGCTGGGAGAGATaGTCGAAGGGCAACCGGGGA +
Preference number: 4 (lower is better)
Translates to: KECFSKHPSQGATAVSRHVCWER*SKGNRG
Trigger: TCCCCGGTTGCCCTTCGACCATCTCTCCCAGCACAC...GTGCCTGGAAACGGCGGTGGCACCCTGCGAAGGATGCTTAGAGAAACACTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR CCA 90 bp GTGAAAGAGTGTTTCTCTAAGCATCCTTCGCAGGGTGCCACCGCCGTTTCCAGGGCTATGCTGTCCAGGTaGCCGTTCATGGTCCGCAGC +
Preference number: 4 (lower is better)
Translates to: VKECFSKHPSQGATAVSRAMLSR*PFMVRS
Trigger: GCTGCGGACCATGAACGGCCACCTGGACAGCATAGC...CCTGGAAACGGCGGTGGCACCCTGCGAAGGATGCTTAGAGAAACACTCTTTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR TCA 90 bp CAGATGGTCCCTAATGGTGTGGACTTCTCTGCTCATTTTGAAAGGGCTCTGGCACGAGGGCTACCACCTTaGAGGCCACGGGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: QMVPNGVDFSAHFERALARGLPP*RPRAGS
Trigger: AGACCCTGCCCGTGGCCTTCAAGGTGGTAGCCCTCG...TGCCAGAGCCCTTTCAAAATGAGCAGAGAAGTCCACACCATTAGGGACCATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp TTCGCTGCTGGGGAGGGACAGGCAGGGATGCCTGGTGCAAGCGATCCCTCGGCCCAAATCTCAGATCGTTaGACCTTGCTACTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: FAAGEGQAGMPGASDPSAQISDR*TLLLGF
Trigger: AAAACCAAGTAGCAAGGTTCAACGATCTGAGATTTG...GGCCGAGGGATCGCTTGCACCAGGCATCCCTGCCTGTCCCTCCCCAGCAGCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
CDS-3UTR TCA 90 bp AAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTGCCGGTTATGGTCAAGGTaGAACTCTTGCCTCGTCCAC +
Preference number: 4 (lower is better)
Translates to: KAVCRSPWAICPLSSATCRLWSR*NSCLVH
Trigger: GTGGACGAGGCAAGAGTTTCACCTTGACCATAACCG...GCAGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp TCTGAAGCACCTGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGCAGAAGCCTGGCTCTTCTTACTaGGAGTGGAAGGCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: SEAPAWLFLLRVEGQRQKPGSSY*EWKARG
Trigger: GCCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGG...CTTCTGCCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCAGGTGCTTCAGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483377.5
ENST00000646519.1
CDS-3UTR TCA 90 bp AAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTGCGCTCTCAGTGAGGGATaGAATGCTTGGGAACTGCCT +
Preference number: 4 (lower is better)
Translates to: KAVCRSPWAICPLSSATCALSEG*NAWELP
Trigger: AGGCAGTTCCCAAGCATTTCATCCCTCACTGAGAGC...GCAGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGCCTCAACTGGTTTTGTaGGCTGTCTGCGGAGGGCAC +
Preference number: 4 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLRPQLVL*AVCGGH
Trigger: GTGCCCTCCGCAGACAGCTCACAAAACCAGTTGAGG...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGCCAATGAAGGGACCCTaGCTTTTCGGGGAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLRPMKGP*LFGEES
Trigger: GCTCTCCTCCCCGAAAAGTCAGGGTCCCTTCATTGG...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp GTAGAGATATGGAGTGCTGCTGGTCTGGAAGGGTCCACTCTGGCTTTGGGAAGAGGGAGGCGGGGGACTTaGGTTTGCAGCTTGGAATGG +
Preference number: 4 (lower is better)
Translates to: VEIWSAAGLEGSTLALGRGRRGT*VCSLEW
Trigger: CCATTCCAAGCTGCAAACTCAAGTCCCCCGCCTCCC...TCTTCCCAAAGCCAGAGTGGACCCTTCCAGACCAGCAGCACTCCATATCTCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR GCA 90 bp AATGCGCCTAGGCACATCGGTGATGGCAGGAAGCCCAGTGCCCCGTGTGGAAGAGATTTAATAGCGTGCTaGCATTCGAGGTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: NAPRHIGDGRKPSAPCGRDLIAC*HSRWWC
Trigger: GCACCACCACCTCGAATGGCAGCACGCTATTAAATC...TCTTCCACACGGGGCACTGGGCTTCCTGCCATCACCGATGTGCCTAGGCGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR GCA 90 bp CAAAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTTGGTCCATACACAGCTaGCACCGTGAGGGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: QRLSVGPRGPYVLSAQLPWSIHS*HREGVK
Trigger: CTTCACACCCTCACGGTGGCAGCTGTGTATGGACCA...AGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp AAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTGCCCTGCTGGAACCTGCTaGCTTTTCAGAGGACCTACT +
Preference number: 4 (lower is better)
Translates to: KAVCRSPWAICPLSSATCPAGTC*LFRGPT
Trigger: AGTAGGTCCTCTGAAAAGGCAGCAGGTTCCAGCAGG...GCAGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp GGGTGCCACCGCCGTTTCCAGGCACTTTTTCTGCTAGACGCTCAAGACAAGAGATGGAGCTGGCCTCGCTaGTGCTTTGGCGACTTGCTT +
Preference number: 4 (lower is better)
Translates to: GCHRRFQALFLLDAQDKRWSWPR*CFGDLL
Trigger: AAGCAAGTCGCCAAAGCAGCAGCGAGGCCAGCTCCA...TCTCTTGTCTTGAGCGTCTAGCAGAAAAAGTGCCTGGAAACGGCGGTGGCACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR CCA 90 bp GATGTGAAAGAGTGTTTCTCTAAGCATCCTTCGCAGGGTGCCACCGCCGTTTCCAGCGGGGTGGTAGAGTaGATGGACGGGGACGTCATC +
Preference number: 4 (lower is better)
Translates to: DVKECFSKHPSQGATAVSSGVVE*MDGDVI
Trigger: GATGACGTCCCCGTCCATCCACTCTACCACCCCGCT...GGAAACGGCGGTGGCACCCTGCGAAGGATGCTTAGAGAAACACTCTTTCACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR CCA 90 bp AAAGGTGGGTTTGAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCAGCGGGGTGGTAGAGTaGATGGACGGGGACGTCATC +
Preference number: 4 (lower is better)
Translates to: KGGFEKDQRTRGPLGFEGSGVVE*MDGDVI
Trigger: GATGACGTCCCCGTCCATCCACTCTACCACCCCGCT...GCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTCAAACCCACCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TCTGAAGCACCTGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGCAGAAGAGGTGTGGTAGTGAGTaGTGGCGGACATACCGAGGG +
Preference number: 4 (lower is better)
Translates to: SEAPAWLFLLRVEGQRQKRCGSE*WRTYRG
Trigger: CCCTCGGTATGTCCGCCACCACTCACTACCACACCT...CTTCTGCCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCAGGTGCTTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483377.5
ENST00000646519.1
CDS-3UTR CCA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATAGGTGTGGTAGTGAGTaGTGGCGGACATACCGAGGG +
Preference number: 4 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNRCGSE*WRTYRG
Trigger: CCCTCGGTATGTCCGCCACCACTCACTACCACACCT...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATGGAGTGCTGCTGGTCTaGAAGGGTCCACTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNGVLLV*KGPLWL
Trigger: AAGCCAGAGTGGACCCTTCCAGACCAGCAGCACTCC...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATATGGCGGAAGCATTCTaGAAGGAGACCGGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNMAEAF*KETGLP
Trigger: GGGGAGACCGGTCTCCTTCCAGAATGCTTCCGCCAT...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATTGCTGCCATTCGAGGTaGTGGTGCATGGCGGAAGCA +
Preference number: 4 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNCCHSR*WCMAEA
Trigger: TGCTTCCGCCATGCACCACCACCTCGAATGGCAGCA...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATGATACGTGTGGGATGTaGCCCCCAGATACCACTGGG +
Preference number: 4 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNDTCGM*PPDTTG
Trigger: CCCAGTGGTATCTGGGGGCCACATCCCACACGTATC...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTGCAGCTCAGCTACCTGCTaGAACCTGCTGCCTTTTCAG +
Preference number: 4 (lower is better)
Translates to: KAVCRSPWAICPLSSATCSSATC*NLLPFQ
Trigger: CTGAAAAGGCAGCAGGTTCCAGCAGGTAGCTGAGCT...GCAGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTGCTGTGACTGCCAGGAGTaGTCAAAGTGCATGCCACAG +
Preference number: 4 (lower is better)
Translates to: KAVCRSPWAICPLSSATCCDCQE*SKCMPQ
Trigger: CTGTGGCATGCACTTTGACCACTCCTGGCAGTCACA...GCAGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CAAAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTCGGTTATGGTCAAGGTaGAACTCTTGCCTCGTCCAC +
Preference number: 4 (lower is better)
Translates to: QRLSVGPRGPYVLSAQLPRLWSR*NSCLVH
Trigger: GTGGACGAGGCAAGAGTTTCACCTTGACCATAACCG...AGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp AGGTGGTCGAAGACTGGGAGTCCAAGGTACTGGGCTCTGAATCCCCATGGGAGTCGGTTATGGTCAAGGTaGAACTCTTGCCTCGTCCAC +
Preference number: 4 (lower is better)
Translates to: RWSKTGSPRYWALNPHGSRLWSR*NSCLVH
Trigger: GTGGACGAGGCAAGAGTTTCACCTTGACCATAACCG...ACTCCCATGGGGATTCAGAGCCCAGTACCTTGGACTCCCAGTCTTCGACCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR TCA 90 bp AAAGGTGGGTTTGAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCAAGGGCTCTGGCAAGTaGGAGGCAGTGAGACCGTCT +
Preference number: 4 (lower is better)
Translates to: KGGFEKDQRTRGPLGFEGKGSGK*EAVRPS
Trigger: AGACGGTCTCACTGCCTCTCACTTGCCAGAGCCCTT...GCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTCAAACCCACCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CAAAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTTTAGAGAGCACTCACTaGCTCTGTTGGTCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: QRLSVGPRGPYVLSAQLPLESTH*LCWSRW
Trigger: CCACCGAGACCAACAGAGTCAGTGAGTGCTCTCTAA...AGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371438.5
CDS-3UTR TCA 90 bp TGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGCAGAAGTCAGAGGTGGCCTGCTGCAGAAAATGTaGGGCACTAGGACCAGAGAG +
Preference number: 4 (lower is better)
Translates to: CLALLTESGRPEAEVRGGLLQKM*GTRTRE
Trigger: CTCTCTGGTCCTAGTGCCTCACATTTTCTGCAGCAG...GCCACCTCTGACTTCTGCCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR GCA 90 bp GAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCAAATCTCTGCTATGCTGCTGCTGTTGCTaGTGCTGTTGCGCAGCCACC +
Preference number: 4 (lower is better)
Translates to: EKDQRTRGPLGFEGKSLLCCCCC*CCCAAT
Trigger: GGTGGCTGCGCAACAGCAGCAGCAACAGCAGCAGCA...TAGCAGAGATTTGCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp CAAAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTTCAAGCTTCTGTCTGTaGCTTCTGGGTTCCCGAGGT +
Preference number: 4 (lower is better)
Translates to: QRLSVGPRGPYVLSAQLPSSFCL*LLGSRG
Trigger: ACCTCGGGAACCCAGAAGGCACAGACAGAAGCTTGA...AGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp TGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGCAGAAGTCAGAGGTGGCTCAAGCTTCTGTCTGTaGCTTCTGGGTTCCCGAGGT +
Preference number: 4 (lower is better)
Translates to: CLALLTESGRPEAEVRGGSSFCL*LLGSRG
Trigger: ACCTCGGGAACCCAGAAGGCACAGACAGAAGCTTGA...GCCACCTCTGACTTCTGCCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483377.5
ENST00000646519.1
CDS-3UTR GCA 90 bp AAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTGCATTAAAAGGACTTGGTaGAGAGTTCAGGGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: KAVCRSPWAICPLSSATCIKRTW*RVQGGP
Trigger: CGGCCCTCCCTGAACTCTGCACCAAGTCCTTTTAAT...GCAGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp CAGATGGTCCCTAATGGTGTGGACTTCTCTGCTCATTTTGAAAGGGCTCTGGCATGGCAGGAAGCCCAGTaGCCCGTGTGGAAGACAGCG +
Preference number: 4 (lower is better)
Translates to: QMVPNGVDFSAHFERALAWQEAQ*PVWKTA
Trigger: CGCTGTCTTCCACACGGGGCACTGGGCTTCCTGCCA...TGCCAGAGCCCTTTCAAAATGAGCAGAGAAGTCCACACCATTAGGGACCATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp TGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGCAGAAGTCAGAGGTGGCCTACCTGCTGGAACCTaGTGCCTTTTCAGAGGACCT +
Preference number: 4 (lower is better)
Translates to: CLALLTESGRPEAEVRGGLPAGT*CLFRGP
Trigger: AGGTCCTCTGAAAAGGCAGCAGGTTCCAGCAGGTAG...GCCACCTCTGACTTCTGCCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR GCA 90 bp TGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGCAGAAGTCAGAGGTGGCCTCAGCTCAGCTACCTaGTGGAACCTGCTGCCTTTT +
Preference number: 4 (lower is better)
Translates to: CLALLTESGRPEAEVRGGLSSAT*WNLLPF
Trigger: AAAAGGCAGCAGGTTCCAGCAGGTAGCTGAGCTGAG...GCCACCTCTGACTTCTGCCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR GCA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATGGAGGCGCAGATCTTTaGCGGAGTCTTTGGAACACC +
Preference number: 4 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNGGADL*RSLWNT
Trigger: GGTGTTCCAAAGACTCCGGCAAAGATCTGCGCCTCC...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR GCA 90 bp ACTAGGACCAGAGAGCCCTTTCCTGCTATTTGCTTGAGAAACAAAGCCTTCCCTAACAGAGTCTGGCGATaGGGCGCAGTCGGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: TRTREPFPAICLRNKAFPNRVWR*GAVGLA
Trigger: CGCCAGCCCGACTGCGCCGCATCGCCAGACTCTGTT...AGGGAAGGCTTTGTTTCTCAAGCAAATAGCAGGAAAGGGCTCTCTGGTCCTAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000646519.1
CDS-3UTR CCA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAACCACAGTCCCATCTaGTACCTCTCCGAGGGCTAC +
Preference number: 4 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLRNHSPI*YLSEGY
Trigger: GTAGCCCTCGGAGAGGTACCAGATGGGACTGTGGTT...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATAACCACAGTCCCATCTaGTACCTCTCCGAGGGCTAC +
Preference number: 4 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNNHSPI*YLSEGY
Trigger: GTAGCCCTCGGAGAGGTACCAGATGGGACTGTGGTT...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CCCAGTTCTGAAGCACCTGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGTCTGTCTGTGCCTTCTaGGTTCCCGAGGTCCATCTA +
Preference number: 4 (lower is better)
Translates to: PSSEAPAWLFLLRVEGQRSVCAF*VPEVHL
Trigger: TAGATGGACCTCGGGAACCCAGAAGGCACAGACAGA...CCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCAGGTGCTTCAGAACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483377.5
ENST00000646519.1
CDS-3UTR CCA 90 bp CAAAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTTCTGTCTGTGCCTTCTaGGTTCCCGAGGTCCATCTA +
Preference number: 4 (lower is better)
Translates to: QRLSVGPRGPYVLSAQLPSVCAF*VPEVHL
Trigger: TAGATGGACCTCGGGAACCCAGAAGGCACAGACAGA...AGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGTGCTTGGGAACTGCCTaGGGTCTGAAAAAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLRCLGTA*GLKKGP
Trigger: TGGGCCCTTTTTCAGACCCCAGGCAGTTCCCAAGCA...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATTGTGGTAGTGAGTGGTaGCGGACATACCGAGGGACA +
Preference number: 4 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNCGSEW*RTYRGT
Trigger: TGTCCCTCGGTATGTCCGCCACCACTCACTACCACA...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGTGTGGTAGTGAGTGGTaGCGGACATACCGAGGGACA +
Preference number: 4 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLRCGSEW*RTYRGT
Trigger: TGTCCCTCGGTATGTCCGCCACCACTCACTACCACA...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AAATGCTTGGGAACTGCCTGGGGTCTGAAAAAGGGCCCAGTTCTGAAGCACCTGAGGTGTGGTAGTGAGTaGTGGCGGACATACCGAGGG +
Preference number: 4 (lower is better)
Translates to: KCLGTAWGLKKGPVLKHLRCGSE*WRTYRG
Trigger: CCCTCGGTATGTCCGCCACCACTCACTACCACACCT...CAGGTGCTTCAGAACTGGGCCCTTTTTCAGACCCCAGGCAGTTCCCAAGCATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000483377.5
ENST00000646519.1
CDS-3UTR CCA 90 bp AATGCGCCTAGGCACATCGGTGATGGCAGGAAGCCCAGTGCCCCGTGTGGAAGAGCCATAGTAGAGATATaGAGTGCTGCTGGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: NAPRHIGDGRKPSAPCGRAIVEI*SAAGLE
Trigger: TTCCAGACCAGCAGCACTCCATATCTCTACTATGGC...TCTTCCACACGGGGCACTGGGCTTCCTGCCATCACCGATGTGCCTAGGCGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR CCA 90 bp AAAGGTGGGTTTGAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCCGAGGTGGTGGTGCATaGCGGAAGCATTCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: KGGFEKDQRTRGPLGFEGRGGGA*RKHSGR
Trigger: CCTTCCAGAATGCTTCCGCCATGCACCACCACCTCG...GCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTCAAACCCACCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATTGCCATTCGAGGTGGTaGTGCATGGCGGAAGCATTC +
Preference number: 4 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNCHSRW*CMAEAF
Trigger: GAATGCTTCCGCCATGCACCACCACCTCGAATGGCA...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp GTGGCAGTGTCATCATCTGAAATGCGCCTAGGCACATCGGTGATGGCAGGAAGCTGCCATTCGAGGTGGTaGTGCATGGCGGAAGCATTC +
Preference number: 4 (lower is better)
Translates to: VAVSSSEMRLGTSVMAGSCHSRW*CMAEAF
Trigger: GAATGCTTCCGCCATGCACCACCACCTCGAATGGCA...GCTTCCTGCCATCACCGATGTGCCTAGGCGCATTTCAGATGATGACACTGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR CCA 90 bp AAAGGTGGGTTTGAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCTGCTGCCATTCGAGGTaGTGGTGCATGGCGGAAGCA +
Preference number: 4 (lower is better)
Translates to: KGGFEKDQRTRGPLGFEGCCHSR*WCMAEA
Trigger: TGCTTCCGCCATGCACCACCACCTCGAATGGCAGCA...GCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTCAAACCCACCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TCAGAGGTGGCAGTGTCATCATCTGAAATGCGCCTAGGCACATCGGTGATGGCATGCTGCCATTCGAGGTaGTGGTGCATGGCGGAAGCA +
Preference number: 4 (lower is better)
Translates to: SEVAVSSSEMRLGTSVMACCHSR*WCMAEA
Trigger: TGCTTCCGCCATGCACCACCACCTCGAATGGCAGCA...TGCCATCACCGATGTGCCTAGGCGCATTTCAGATGATGACACTGCCACCTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR CCA 90 bp AAAGGTGGGTTTGAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCCTGCCAGTGGGGCCTTaGGTAAGGCAGATTGGGGTT +
Preference number: 4 (lower is better)
Translates to: KGGFEKDQRTRGPLGFEGLPVGP*VRQIGV
Trigger: AACCCCAATCTGCCTTACCCAAGGCCCCACTGGCAG...GCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTCAAACCCACCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AAAGGTGGGTTTGAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCGTCTGTAGGTCCCCGTaGGCCATATGTCCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: KGGFEKDQRTRGPLGFEGVCRSP*AICPLS
Trigger: GCTGAGAGGACATATGGCCCACGGGGACCTACAGAC...GCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTCAAACCCACCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGCAGAAGTCAGAGGTGGCTGTGACTGCCAGGAGTaGTCAAAGTGCATGCCACAG +
Preference number: 4 (lower is better)
Translates to: CLALLTESGRPEAEVRGGCDCQE*SKCMPQ
Trigger: CTGTGGCATGCACTTTGACCACTCCTGGCAGTCACA...GCCACCTCTGACTTCTGCCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR CCA 90 bp CTGTCCTTGTGGATTAAAAGGACTTGGTGCAGAGTTCAGGGAGGGCCGTGGGTTCTCTGTTGGTCTCGGTaGCTGGTAGTGACCTGCGGA +
Preference number: 4 (lower is better)
Translates to: LSLWIKRTWCRVQGGPWVLCWSR*LVVTCG
Trigger: TCCGCAGGTCACTACCAGCCACCGAGACCAACAGAG...AACCCACGGCCCTCCCTGAACTCTGCACCAAGTCCTTTTAATCCACAAGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR CCA 90 bp TCCTTAAAGCTGTACACACATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCGCGTCCTGGGTGCGCTaGCGCCCCCTCCCAGTTGGA +
Preference number: 4 (lower is better)
Translates to: SLKLYTHLLPSEFITDGPASWVR*RPLPVG
Trigger: TCCAACTGGGAGGGGGCGCCAGCGCACCCAGGACGC...GGGACCATCTGTGATAAATTCAGAAGGGAGGAGATGTGTGTACAGCTTTAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR CCA 90 bp GTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAACTGGTTTTTGGAACACCCGGGGTaGCAGCTGCGAACGGGCGCG +
Preference number: 4 (lower is better)
Translates to: VMEASILPHVPLVHLNWFLEHPG*QLRTGA
Trigger: CGCGCCCGTTCGCAGCTGCCACCCCGGGTGTTCCAA...AAACCAGTTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR CCA 90 bp GCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTGGGCCAACAGAGTCTaGCGATGCGGCGCAGTCGGG +
Preference number: 4 (lower is better)
Translates to: ANASCFHVLTWILGQSLSWANRV*RCGAVG
Trigger: CCCGACTGCGCCGCATCGCCAGACTCTGTTGGCCCA...GGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR CCA 90 bp TGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGCAGAAGTCAGAGGTGGCGACTGCCTACCACTGTaGCTTTTCCCCCTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: CLALLTESGRPEAEVRGGDCLPL*LFPLAL
Trigger: AAGAGCAAGGGGGAAAAGCCACAGTGGTAGGCAGTC...GCCACCTCTGACTTCTGCCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR CCA 90 bp TGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGCAGAAGTCAGAGGTGGCGTGTCATCATCCCCATaGGAGTCCATCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: CLALLTESGRPEAEVRGGVSSSP*ESICCR
Trigger: TCTGCAGCAGATGGACTCCCATGGGGATGATGACAC...GCCACCTCTGACTTCTGCCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR TCA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGCGGTTATGGTCAAGGTaGAACTCTTGCCTCGTCCAC +
Preference number: 4 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLRRLWSR*NSCLVH
Trigger: GTGGACGAGGCAAGAGTTTCACCTTGACCATAACCG...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CTCTGTCCTTGTGGATTAAAAGGACTTGGTGCAGAGTTCAGGGAGGGCCGTGGGCGGTTATGGTCAAGGTaGAACTCTTGCCTCGTCCAC +
Preference number: 4 (lower is better)
Translates to: LCPCGLKGLGAEFREGRGRLWSR*NSCLVH
Trigger: GTGGACGAGGCAAGAGTTTCACCTTGACCATAACCG...CCCACGGCCCTCCCTGAACTCTGCACCAAGTCCTTTTAATCCACAAGGACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR TCA 90 bp TGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGCAGAAGTCAGAGGTGGCCTTGGGGAGGATTTGTaGAGACGGTTATGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: CLALLTESGRPEAEVRGGLGEDL*RRLWSR
Trigger: CCTTGACCATAACCGTCTTCACAAATCCTCCCCAAG...GCCACCTCTGACTTCTGCCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483377.5
ENST00000646519.1
CDS-3UTR TCA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATTGCGCCCTAAATCACTaGGGCGGTCAGAGAACAAAC +
Preference number: 4 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNCALNH*GGQRTN
Trigger: GTTTGTTCTCTGACCGCCTCAGTGATTTAGGGCGCA...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp TGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAAGAGGGCCGTGGGTTCTaGGGCGGGACACCTACTCTC +
Preference number: 4 (lower is better)
Translates to: WYCDGSIHSTSCPFSAPQEGRGF*GGTPTL
Trigger: GAGAGTAGGTGTCCCGCCTCAGAACCCACGGCCCTC...TTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATAGAAGCGGCTCTCAGTaGGGGATGAAATGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNRSGSQ*GMKCLG
Trigger: TCCCAAGCATTTCATCCCTCACTGAGAGCCGCTTCT...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAGAAGCGGCTCTCAGTaGGGGATGAAATGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLRRSGSQ*GMKCLG
Trigger: TCCCAAGCATTTCATCCCTCACTGAGAGCCGCTTCT...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp GCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCACCGAGGGACATGCCTaGGGTGACTGGCGGGGTGTA +
Preference number: 4 (lower is better)
Translates to: ANASCFHVLTWILGQSLSTEGHA*GDWRGV
Trigger: TACACCCCGCCAGTCACCTCAGGCATGTCCCTCGGT...GGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTACCGAGGGACATGCCTaGGGTGACTGGCGGGGTGTA +
Preference number: 4 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPTEGHA*GDWRGV
Trigger: TACACCCCGCCAGTCACCTCAGGCATGTCCCTCGGT...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGCCACTGGGCCACTGCTaGGGAATTTCAATATGGTCG +
Preference number: 4 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLRPLGHC*GISIWS
Trigger: CGACCATATTGAAATTCCTCAGCAGTGGCCCAGTGG...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATCCACTGGGCCACTGCTaGGGAATTTCAATATGGTCG +
Preference number: 4 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNPLGHC*GISIWS
Trigger: CGACCATATTGAAATTCCTCAGCAGTGGCCCAGTGG...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CAAAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTACTCATCCACAATCATaGCCTGTGGCACAAAGCGGA +
Preference number: 4 (lower is better)
Translates to: QRLSVGPRGPYVLSAQLPTHPQS*PVAQSG
Trigger: TCCGCTTTGTGCCACAGGTCATGATTGTGGATGAGT...AGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp TTGCTTGAGAAACAAAGCCTTCCCTCCTCCCAAGTTGAAAGAAATAAAGGAGTCGGAGGAGGCGACGACTaGGTAGCGGCCTGTGCGCCG +
Preference number: 4 (lower is better)
Translates to: LLEKQSLPSSQVERNKGVGGGDD*VAACAP
Trigger: CGGCGCACAGGCCGCTACTCAGTCGTCGCCTCCTCC...GACTCCTTTATTTCTTTCAACTTGGGAGGAGGGAAGGCTTTGTTTCTCAAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR GCA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTTGTTGCTGCTGCTGTTaGGCAGCCACCACCGGGCTC +
Preference number: 4 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPCCCCC*AATTGL
Trigger: GAGCCCGGTGGTGGCTGCGCAACAGCAGCAGCAACA...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp TTCGCTGCTGGGGAGGGACAGGCAGGGATGCCTGGTGCAAGCGATCCCTCGGCCTACTGTAACTTTAATTaGTCTGTGATAGGTAGCTAC +
Preference number: 4 (lower is better)
Translates to: FAAGEGQAGMPGASDPSAYCNFN*SVIGSY
Trigger: GTAGCTACCTATCACAGAGCAATTAAAGTTACAGTA...GGCCGAGGGATCGCTTGCACCAGGCATCCCTGCCTGTCCCTCCCCAGCAGCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
CDS-3UTR GCA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATTCAAGCTTCTGTCTGTaGCTTCTGGGTTCCCGAGGT +
Preference number: 4 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNSSFCL*LLGSRG
Trigger: ACCTCGGGAACCCAGAAGGCACAGACAGAAGCTTGA...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp AAGAGTGTTTCTCTAAGCATCCTTCGCAGGGTGCCACCGCCGTTTCCAGGCACTTCAAGCTTCTGTCTGTaGCTTCTGGGTTCCCGAGGT +
Preference number: 4 (lower is better)
Translates to: KSVSLSILRRVPPPFPGTSSFCL*LLGSRG
Trigger: ACCTCGGGAACCCAGAAGGCACAGACAGAAGCTTGA...AGTGCCTGGAAACGGCGGTGGCACCCTGCGAAGGATGCTTAGAGAAACACTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR GCA 90 bp CAAAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTATTAAAAGGACTTGGTaGAGAGTTCAGGGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: QRLSVGPRGPYVLSAQLPIKRTW*RVQGGP
Trigger: CGGCCCTCCCTGAACTCTGCACCAAGTCCTTTTAAT...AGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp CTTCTGTCTGTGCCTTCTGGGTTCCCGAGGTCCATCTACTGTAACTTTAATTGCTGGCAGGAAGCCCAGTaGCCCGTGTGGAAGACAGCG +
Preference number: 4 (lower is better)
Translates to: LLSVPSGFPRSIYCNFNCWQEAQ*PVWKTA
Trigger: CGCTGTCTTCCACACGGGGCACTGGGCTTCCTGCCA...GCAATTAAAGTTACAGTAGATGGACCTCGGGAACCCAGAAGGCACAGACAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR GCA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTTGGCAGGAAGCCCAGTaGCCCGTGTGGAAGACAGCG +
Preference number: 4 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPWQEAQ*PVWKTA
Trigger: CGCTGTCTTCCACACGGGGCACTGGGCTTCCTGCCA...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAGAGATATGGAGTGCTaGTGGTCTGGAAGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLRRDMEC*WSGRVH
Trigger: GTGGACCCTTCCAGACCAGCAGCACTCCATATCTCT...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp TCTGAAGCACCTGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGCAGAAGAGAGATATGGAGTGCTaGTGGTCTGGAAGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: SEAPAWLFLLRVEGQRQKRDMEC*WSGRVH
Trigger: GTGGACCCTTCCAGACCAGCAGCACTCCATATCTCT...CTTCTGCCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCAGGTGCTTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483377.5
ENST00000646519.1
CDS-3UTR GCA 90 bp TCAGAGGTGGCAGTGTCATCATCTGAAATGCGCCTAGGCACATCGGTGATGGCACATTCGAGGTGGTGGTaGATGGCGGAAGCATTCTGG +
Preference number: 4 (lower is better)
Translates to: SEVAVSSSEMRLGTSVMAHSRWW*MAEAFW
Trigger: CCAGAATGCTTCCGCCATGCACCACCACCTCGAATG...TGCCATCACCGATGTGCCTAGGCGCATTTCAGATGATGACACTGCCACCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR GCA 90 bp CAAAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTAAACAGTTGGGGAACTaGTGTGGCTTCCATCAGCGT +
Preference number: 4 (lower is better)
Translates to: QRLSVGPRGPYVLSAQLPKQLGN*CGFHQR
Trigger: ACGCTGATGGAAGCCACAGCAGTTCCCCAACTGTTT...AGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGCCTGCTGGAACCTGCTaGCTTTTCAGAGGACCTACT +
Preference number: 4 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLRPAGTC*LFRGPT
Trigger: AGTAGGTCCTCTGAAAAGGCAGCAGGTTCCAGCAGG...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AAATGCTTGGGAACTGCCTGGGGTCTGAAAAAGGGCCCAGTTCTGAAGCACCTGAACCACAGTCCCATCTaGTACCTCTCCGAGGGCTAC +
Preference number: 4 (lower is better)
Translates to: KCLGTAWGLKKGPVLKHLNHSPI*YLSEGY
Trigger: GTAGCCCTCGGAGAGGTACCAGATGGGACTGTGGTT...CAGGTGCTTCAGAACTGGGCCCTTTTTCAGACCCCAGGCAGTTCCCAAGCATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000483377.5
ENST00000646519.1
CDS-3UTR CCA 90 bp TCTGAAGCACCTGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGCAGAAGTCTGTCTGTGCCTTCTaGGTTCCCGAGGTCCATCTA +
Preference number: 4 (lower is better)
Translates to: SEAPAWLFLLRVEGQRQKSVCAF*VPEVHL
Trigger: TAGATGGACCTCGGGAACCCAGAAGGCACAGACAGA...CTTCTGCCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCAGGTGCTTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483377.5
ENST00000646519.1
CDS-3UTR CCA 90 bp CAAAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTCACCTACTCTCATACTaGGATGAGGAATGCGCCCTA +
Preference number: 4 (lower is better)
Translates to: QRLSVGPRGPYVLSAQLPHLLSY*DEECAL
Trigger: TAGGGCGCATTCCTCATCCCAGTATGAGAGTAGGTG...AGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CAAAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTTCTGAAGCACCTGCCTaGCTCTTCTTACTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: QRLSVGPRGPYVLSAQLPSEAPA*LFLLRV
Trigger: CACTCTCAGTAAGAAGAGCCAGGCAGGTGCTTCAGA...AGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359524.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CTGTCCTTGTGGATTAAAAGGACTTGGTGCAGAGTTCAGGGAGGGCCGTGGGTTTGTGGTAGTGAGTGGTaGCGGACATACCGAGGGACA +
Preference number: 4 (lower is better)
Translates to: LSLWIKRTWCRVQGGPWVCGSEW*RTYRGT
Trigger: TGTCCCTCGGTATGTCCGCCACCACTCACTACCACA...AACCCACGGCCCTCCCTGAACTCTGCACCAAGTCCTTTTAATCCACAAGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR CCA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATGATATGGAGTGCTGCTaGTCTGGAAGGGTCCACTCT +
Preference number: 4 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNDMECC*SGRVHS
Trigger: AGAGTGGACCCTTCCAGACCAGCAGCACTCCATATC...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp GAAGCACCTGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGCAGAAGTCAGATATGGAGTGCTGCTaGTCTGGAAGGGTCCACTCT +
Preference number: 4 (lower is better)
Translates to: EAPAWLFLLRVEGQRQKSDMECC*SGRVHS
Trigger: AGAGTGGACCCTTCCAGACCAGCAGCACTCCATATC...TGACTTCTGCCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCAGGTGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483377.5
ENST00000646519.1
CDS-3UTR CCA 90 bp GAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCAAATCTCTGCTACGAGGTGGTGGTGCATaGCGGAAGCATTCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: EKDQRTRGPLGFEGKSLLRGGGA*RKHSGR
Trigger: CCTTCCAGAATGCTTCCGCCATGCACCACCACCTCG...TAGCAGAGATTTGCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AAAGGTGGGTTTGAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCTGCCATTCGAGGTGGTaGTGCATGGCGGAAGCATTC +
Preference number: 4 (lower is better)
Translates to: KGGFEKDQRTRGPLGFEGCHSRW*CMAEAF
Trigger: GAATGCTTCCGCCATGCACCACCACCTCGAATGGCA...GCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTCAAACCCACCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp GAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCAAATCTCTGCTATGCTGCCATTCGAGGTaGTGGTGCATGGCGGAAGCA +
Preference number: 4 (lower is better)
Translates to: EKDQRTRGPLGFEGKSLLCCHSR*WCMAEA
Trigger: TGCTTCCGCCATGCACCACCACCTCGAATGGCAGCA...TAGCAGAGATTTGCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CAAAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTTTGGGTAAGGCAGATTaGGGTTCCCCTGTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: QRLSVGPRGPYVLSAQLPLGKAD*GSPVVL
Trigger: CAACACAACAGGGGAACCCCAATCTGCCTTACCCAA...AGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATAGCTCAGCTACCTGCTaGAACCTGCTGCCTTTTCAG +
Preference number: 4 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNSSATC*NLLPFQ
Trigger: CTGAAAAGGCAGCAGGTTCCAGCAGGTAGCTGAGCT...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATGCCCCTTGCCCTCCTTaGCCCTCCATTGTAAGAAAT +
Preference number: 4 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNAPCPP*PSIVRN
Trigger: ATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGC...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGGCCCCTTGCCCTCCTTaGCCCTCCATTGTAAGAAAT +
Preference number: 4 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLRAPCPP*PSIVRN
Trigger: ATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGC...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGTGTGACTGCCAGGAGTaGTCAAAGTGCATGCCACAG +
Preference number: 4 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLRCDCQE*SKCMPQ
Trigger: CTGTGGCATGCACTTTGACCACTCCTGGCAGTCACA...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGTCCTGCAATGCTGGGTaGCCTACAAAGGTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLRSCNAG*PTKVGL
Trigger: CAAACCCACCTTTGTAGGCCACCCAGCATTGCAGGA...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp GATGTGAAAGAGTGTTTCTCTAAGCATCCTTCGCAGGGTGCCACCGCCGTTTCCAAGGTGGTCGAAGACTaGGAGTCCAAGGTACTGGGC +
Preference number: 4 (lower is better)
Translates to: DVKECFSKHPSQGATAVSKVVED*ESKVLG
Trigger: GCCCAGTACCTTGGACTCCCAGTCTTCGACCACCTT...GGAAACGGCGGTGGCACCCTGCGAAGGATGCTTAGAGAAACACTCTTTCACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR CCA 90 bp AATGCGCCTAGGCACATCGGTGATGGCAGGAAGCCCAGTGCCCCGTGTGGAAGAAGAGGCAGAATCATGTaGTTTGTGACCTCACAGTAC +
Preference number: 4 (lower is better)
Translates to: NAPRHIGDGRKPSAPCGRRGRIM*FVTSQY
Trigger: GTACTGTGAGGTCACAAACCACATGATTCTGCCTCT...TCTTCCACACGGGGCACTGGGCTTCCTGCCATCACCGATGTGCCTAGGCGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR CCA 90 bp AATGCGCCTAGGCACATCGGTGATGGCAGGAAGCCCAGTGCCCCGTGTGGAAGATGCAAGCACTATTACTaGAGAGGCAGAATCATGTGG +
Preference number: 4 (lower is better)
Translates to: NAPRHIGDGRKPSAPCGRCKHYY*RGRIMW
Trigger: CCACATGATTCTGCCTCTCCAGTAATAGTGCTTGCA...TCTTCCACACGGGGCACTGGGCTTCCTGCCATCACCGATGTGCCTAGGCGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR TCA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATCTTGGGGAGGATTTGTaGAGACGGTTATGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNLGEDL*RRLWSR
Trigger: CCTTGACCATAACCGTCTTCACAAATCCTCCCCAAG...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CTGAATGATGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGGAGGGCCGTGGGTTCTaGGGCGGGACACCTACTCTC +
Preference number: 4 (lower is better)
Translates to: LNDGTVMEASILPHVPLVEGRGF*GGTPTL
Trigger: GAGAGTAGGTGTCCCGCCTCAGAACCCACGGCCCTC...CACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCATCATTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp AGCCCCTTGCCCTCCTTGGCCCTCCATTGTAAGAAATACAAATGTCAAAGGCTGCCTGGCTCTTCTTACTaGGAGTGGAAGGCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: SPLPSLALHCKKYKCQRLPGSSY*EWKARG
Trigger: GCCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGG...CAGCCTTTGACATTTGTATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359524.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp GTAGAGATATGGAGTGCTGCTGGTCTGGAAGGGTCCACTCTGGCTTTGGGAAGAAGAAGCGGCTCTCAGTaGGGGATGAAATGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: VEIWSAAGLEGSTLALGRRSGSQ*GMKCLG
Trigger: TCCCAAGCATTTCATCCCTCACTGAGAGCCGCTTCT...TCTTCCCAAAGCCAGAGTGGACCCTTCCAGACCAGCAGCACTCCATATCTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483377.5
ENST00000646519.1
CDS-3UTR TCA 90 bp AAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTGCAAACTGATAGGATCCTaGCGAAGTGCCATAGTAGAG +
Preference number: 4 (lower is better)
Translates to: KAVCRSPWAICPLSSATCKLIGS*RSAIVE
Trigger: CTCTACTATGGCACTTCGTCAGGATCCTATCAGTTT...GCAGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp AGCCCCTTGCCCTCCTTGGCCCTCCATTGTAAGAAATACAAATGTCAAAGGCTGCCTCAACTGGTTTTGTaGGCTGTCTGCGGAGGGCAC +
Preference number: 4 (lower is better)
Translates to: SPLPSLALHCKKYKCQRLPQLVL*AVCGGH
Trigger: GTGCCCTCCGCAGACAGCTCACAAAACCAGTTGAGG...CAGCCTTTGACATTTGTATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGGGGGCCGTTAGGGTTTaGAGGCAAATCTCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLRGAVRV*RQISAK
Trigger: TTTAGCAGAGATTTGCCTTCAAACCCTAACGGCCCC...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CAAAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTCTACAAAGGTGGGTTTaGGAAGGACCAGAGAACAAG +
Preference number: 4 (lower is better)
Translates to: QRLSVGPRGPYVLSAQLPLQRWV*EGPENK
Trigger: CTTGTTCTCTGGTCCTTCTCAAACCCACCTTTGTAG...AGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATATGGTGTCACTGTGCTaGAGAGGCTGTTTGATGCCA +
Preference number: 4 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNMVSLC*RGCLMP
Trigger: TGGCATCAAACAGCCTCTTCAGCACAGTGACACCAT...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000647337.2
CDS-3UTR TCA 90 bp CTTGGGAACTGCCTGGGGTCTGAAAAAGGGCCCAGTTCTGAAGCACCTGCCTGGCAAAAGAAGTTTTGCTaGCATGGTGTCACTGTGCTG +
Preference number: 4 (lower is better)
Translates to: LGNCLGSEKGPSSEAPAWQKKFC*HGVTVL
Trigger: CAGCACAGTGACACCATGTCAGCAAAACTTCTTTTG...CCAGGCAGGTGCTTCAGAACTGGGCCCTTTTTCAGACCCCAGGCAGTTCCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR TCA 90 bp TCTGAAGCACCTGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGCAGAAGGCTGAAGAGGCTGTTTaGTGCCATAGTCCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: SEAPAWLFLLRVEGQRQKAEEAV*CHSPSF
Trigger: AAAGGAGGGACTATGGCATCAAACAGCCTCTTCAGC...CTTCTGCCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCAGGTGCTTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR TCA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGGCTGAAGAGGCTGTTTaGTGCCATAGTCCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLRAEEAV*CHSPSF
Trigger: AAAGGAGGGACTATGGCATCAAACAGCCTCTTCAGC...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371432.7
ENST00000371438.5
ENST00000647337.2
CDS-3UTR TCA 90 bp CTGAATGATGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCTGCCGGGCGGAGTCTaGTGGGCCAACAGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: LNDGTVMEASILPHVPLVLPGGV*WANRVW
Trigger: CCAGACTCTGTTGGCCCATCAGACTCCGCCCGGCAG...CACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCATCATTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR TCA 90 bp TGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGCAGAAGTCAGAGGTGGCATGGGGCTGAGGAGGTaGGAAATCAAGTTTGATGAG +
Preference number: 4 (lower is better)
Translates to: CLALLTESGRPEAEVRGGMGLRR*EIKFDE
Trigger: CTCATCAAACTTGATTTCTCACCTCCTCAGCCCCAT...GCCACCTCTGACTTCTGCCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR TCA 90 bp AACGTCACCAGAGATGGATGCCCCACCAACGCTGGAGCTGGCCTCGCTGCTGCTAAACAAACAAACTTGTaGACGTCACCAGAGATGGAT +
Preference number: 4 (lower is better)
Translates to: NVTRDGCPTNAGAGLAAAKQTNL*TSPEMD
Trigger: ATCCATCTCTGGTGACGTTCACAAGTTTGTTTGTTT...AGCAGCAGCGAGGCCAGCTCCAGCGTTGGTGGGGCATCCATCTCTGGTGACGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR GCA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATATTAAAAGGACTTGGTaGAGAGTTCAGGGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNIKRTW*RVQGGP
Trigger: CGGCCCTCCCTGAACTCTGCACCAAGTCCTTTTAAT...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp GTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAACTGGTTTTGGCAGGAAGCCCAGTaGCCCGTGTGGAAGACAGCG +
Preference number: 4 (lower is better)
Translates to: VMEASILPHVPLVHLNWFWQEAQ*PVWKTA
Trigger: CGCTGTCTTCCACACGGGGCACTGGGCTTCCTGCCA...AAACCAGTTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGGAAATGCTTGGGAACTaGCTGGGGTCTGAAAAAGGG +
Preference number: 4 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLREMLGN*LGSEKG
Trigger: CCCTTTTTCAGACCCCAGGCAGTTCCCAAGCATTTC...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATAGTAGAGATATGGAGTaGTGCTGGTCTGGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNSRDME*CWSGRV
Trigger: GACCCTTCCAGACCAGCAGCACTCCATATCTCTACT...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp GAAGCACCTGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGCAGAAGTCAAGTAGAGATATGGAGTaGTGCTGGTCTGGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: EAPAWLFLLRVEGQRQKSSRDME*CWSGRV
Trigger: GACCCTTCCAGACCAGCAGCACTCCATATCTCTACT...TGACTTCTGCCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCAGGTGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483377.5
ENST00000646519.1
CDS-3UTR GCA 90 bp GAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCAAATCTCTGCTACATTCGAGGTGGTGGTaGATGGCGGAAGCATTCTGG +
Preference number: 4 (lower is better)
Translates to: EKDQRTRGPLGFEGKSLLHSRWW*MAEAFW
Trigger: CCAGAATGCTTCCGCCATGCACCACCACCTCGAATG...TAGCAGAGATTTGCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATGATTTAATAGCGTGCTaGCATTCGAGGTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNDLIAC*HSRWWC
Trigger: GCACCACCACCTCGAATGGCAGCACGCTATTAAATC...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAAACAGTTGGGGAACTaGTGTGGCTTCCATCAGCGT +
Preference number: 4 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLRKQLGN*CGFHQR
Trigger: ACGCTGATGGAAGCCACAGCAGTTCCCCAACTGTTT...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp AAAGGTGGGTTTGAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCCCTGCTGGAACCTGCTaGCTTTTCAGAGGACCTACT +
Preference number: 4 (lower is better)
Translates to: KGGFEKDQRTRGPLGFEGPAGTC*LFRGPT
Trigger: AGTAGGTCCTCTGAAAAGGCAGCAGGTTCCAGCAGG...GCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTCAAACCCACCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp GCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCCCCCACACGCTGTCCTaGAATGCTGGGTGGCCTACA +
Preference number: 4 (lower is better)
Translates to: ANASCFHVLTWILGQSLSPHTLS*NAGWPT
Trigger: TGTAGGCCACCCAGCATTGCAGGACAGCGTGTGGGG...GGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp ACTTTTGCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCAACAGAGTCTGGCGATaGGGCGCAGTCGGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: TFANASCFHVLTWILGQSNRVWR*GAVGLA
Trigger: CGCCAGCCCGACTGCGCCGCATCGCCAGACTCTGTT...GGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGCAAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR GCA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATCCATGGGAGTCCATCTaGTGCAGAAAATGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNPWESI*CRKCEA
Trigger: TGCCTCACATTTTCTGCAGCAGATGGACTCCCATGG...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR CCA 90 bp TGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAAACGAGTTCGGCCGGGTaGTCGGCGATGATCTCCACC +
Preference number: 4 (lower is better)
Translates to: WYCDGSIHSTSCPFSAPQTSSAG*SAMIST
Trigger: GGTGGAGATCATCGCCGACCACCCGGCCGAACTCGT...TTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AAAGGTGGGTTTGAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCTCTGTCTGTGCCTTCTaGGTTCCCGAGGTCCATCTA +
Preference number: 4 (lower is better)
Translates to: KGGFEKDQRTRGPLGFEGSVCAF*VPEVHL
Trigger: TAGATGGACCTCGGGAACCCAGAAGGCACAGACAGA...GCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTCAAACCCACCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AAAGAGTGTTTCTCTAAGCATCCTTCGCAGGGTGCCACCGCCGTTTCCAGGCACCACCTACTCTCATACTaGGATGAGGAATGCGCCCTA +
Preference number: 4 (lower is better)
Translates to: KECFSKHPSQGATAVSRHHLLSY*DEECAL
Trigger: TAGGGCGCATTCCTCATCCCAGTATGAGAGTAGGTG...GTGCCTGGAAACGGCGGTGGCACCCTGCGAAGGATGCTTAGAGAAACACTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR CCA 90 bp ATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTAATGGTGTGGACTTCTCTGTTCAGGGAGGGCCGTaGGTTCTGAGGCGGGACACC +
Preference number: 4 (lower is better)
Translates to: ISSLLNLSQMVPNGVDFSVQGGP*VLRRDT
Trigger: GGTGTCCCGCCTCAGAACCCACGGCCCTCCCTGAAC...AGAGAAGTCCACACCATTAGGGACCATCTGTGATAAATTCAGAAGGGAGGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp ACTTTTGCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCGTTCAGGGAGGGCCGTaGGTTCTGAGGCGGGACACC +
Preference number: 4 (lower is better)
Translates to: TFANASCFHVLTWILGQSVQGGP*VLRRDT
Trigger: GGTGTCCCGCCTCAGAACCCACGGCCCTCCCTGAAC...GGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGCAAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CAAAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTTGGATTAAAAGGACTTaGTGCAGAGTTCAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: QRLSVGPRGPYVLSAQLPWIKRT*CRVQGG
Trigger: CCCTCCCTGAACTCTGCACCAAGTCCTTTTAATCCA...AGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTGCCTGACTCTGTCCTTGTaGATTAAAAGGACTTGGTGC +
Preference number: 4 (lower is better)
Translates to: KAVCRSPWAICPLSSATCLTLSL*IKRTWC
Trigger: GCACCAAGTCCTTTTAATCCACAAGGACAGAGTCAG...GCAGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TCTGAAGCACCTGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGCAGAAGTCTGAAGCACCTGCCTaGCTCTTCTTACTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: SEAPAWLFLLRVEGQRQKSEAPA*LFLLRV
Trigger: CACTCTCAGTAAGAAGAGCCAGGCAGGTGCTTCAGA...CTTCTGCCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCAGGTGCTTCAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483377.5
ENST00000646519.1
CDS-3UTR CCA 90 bp CTGTCCTTGTGGATTAAAAGGACTTGGTGCAGAGTTCAGGGAGGGCCGTGGGTTTGGATAGTGCATTCGTaGGTTGGAGAAGCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: LSLWIKRTWCRVQGGPWVWIVHS*VGEAAL
Trigger: GAGAGCCGCTTCTCCAACCCACGAATGCACTATCCA...AACCCACGGCCCTCCCTGAACTCTGCACCAAGTCCTTTTAATCCACAAGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR CCA 90 bp AAAGGTGGGTTTGAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCTGGATAGTGCATTCGTaGGTTGGAGAAGCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: KGGFEKDQRTRGPLGFEGWIVHS*VGEAAL
Trigger: GAGAGCCGCTTCTCCAACCCACGAATGCACTATCCA...GCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTCAAACCCACCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CAGATGGTCCCTAATGGTGTGGACTTCTCTGCTCATTTTGAAAGGGCTCTGGCAGGAGTGCTGCTGGTCTaGAAGGGTCCACTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: QMVPNGVDFSAHFERALAGVLLV*KGPLWL
Trigger: AAGCCAGAGTGGACCCTTCCAGACCAGCAGCACTCC...TGCCAGAGCCCTTTCAAAATGAGCAGAGAAGTCCACACCATTAGGGACCATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AGCCCCTTGCCCTCCTTGGCCCTCCATTGTAAGAAATACAAATGTCAAAGGCTGGGAGTGCTGCTGGTCTaGAAGGGTCCACTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: SPLPSLALHCKKYKCQRLGVLLV*KGPLWL
Trigger: AAGCCAGAGTGGACCCTTCCAGACCAGCAGCACTCC...CAGCCTTTGACATTTGTATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CAGATGGTCCCTAATGGTGTGGACTTCTCTGCTCATTTTGAAAGGGCTCTGGCAATGGCGGAAGCATTCTaGAAGGAGACCGGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: QMVPNGVDFSAHFERALAMAEAF*KETGLP
Trigger: GGGGAGACCGGTCTCCTTCCAGAATGCTTCCGCCAT...TGCCAGAGCCCTTTCAAAATGAGCAGAGAAGTCCACACCATTAGGGACCATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CAGATGGTCCCTAATGGTGTGGACTTCTCTGCTCATTTTGAAAGGGCTCTGGCATGCTGCCATTCGAGGTaGTGGTGCATGGCGGAAGCA +
Preference number: 4 (lower is better)
Translates to: QMVPNGVDFSAHFERALACCHSR*WCMAEA
Trigger: TGCTTCCGCCATGCACCACCACCTCGAATGGCAGCA...TGCCAGAGCCCTTTCAAAATGAGCAGAGAAGTCCACACCATTAGGGACCATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCGGAATTGGTCTGCGGAGGGCACTaGTCCATACACAGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: SCFHVLTWILGQSLSSELVCGGH*SIHSCH
Trigger: GTGGCAGCTGTGTATGGACCAGTGCCCTCCGCAGAC...CAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATTTGGGTAAGGCAGATTaGGGTTCCCCTGTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNLGKAD*GSPVVL
Trigger: CAACACAACAGGGGAACCCCAATCTGCCTTACCCAA...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AGCCCCTTGCCCTCCTTGGCCCTCCATTGTAAGAAATACAAATGTCAAAGGCTGCTGCCAGTGGGGCCTTaGGTAAGGCAGATTGGGGTT +
Preference number: 4 (lower is better)
Translates to: SPLPSLALHCKKYKCQRLLPVGP*VRQIGV
Trigger: AACCCCAATCTGCCTTACCCAAGGCCCCACTGGCAG...CAGCCTTTGACATTTGTATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp GCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCCTTTGCCGGAGTCTTTaGAACACCCGGGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: ANASCFHVLTWILGQSLSLCRSL*NTRGGS
Trigger: GCTGCCACCCCGGGTGTTCCAAAGACTCCGGCAAAG...GGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR CCA 90 bp AAAGAGTGTTTCTCTAAGCATCCTTCGCAGGGTGCCACCGCCGTTTCCAGGCACGGGAGTCCAAGGTACTaGGCTCTGAATCTGAAATGC +
Preference number: 4 (lower is better)
Translates to: KECFSKHPSQGATAVSRHGSPRY*ALNLKC
Trigger: GCATTTCAGATTCAGAGCCCAGTACCTTGGACTCCC...GTGCCTGGAAACGGCGGTGGCACCCTGCGAAGGATGCTTAGAGAAACACTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR TCA 90 bp GTAGAGATATGGAGTGCTGCTGGTCTGGAAGGGTCCACTCTGGCTTTGGGAAGACTTGGGGAGGATTTGTaGAGACGGTTATGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: VEIWSAAGLEGSTLALGRLGEDL*RRLWSR
Trigger: CCTTGACCATAACCGTCTTCACAAATCCTCCCCAAG...TCTTCCCAAAGCCAGAGTGGACCCTTCCAGACCAGCAGCACTCCATATCTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483377.5
ENST00000646519.1
CDS-3UTR TCA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATACTCTCATACTGGGATaGGGAATGCGCCCTAAATCA +
Preference number: 4 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNTLILG*GMRPKS
Trigger: TGATTTAGGGCGCATTCCTCATCCCAGTATGAGAGT...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp GTGGCAGTGTCATCATCTGAAATGCGCCTAGGCACATCGGTGATGGCAGGAAGCACTCTCATACTGGGATaGGGAATGCGCCCTAAATCA +
Preference number: 4 (lower is better)
Translates to: VAVSSSEMRLGTSVMAGSTLILG*GMRPKS
Trigger: TGATTTAGGGCGCATTCCTCATCCCAGTATGAGAGT...GCTTCCTGCCATCACCGATGTGCCTAGGCGCATTTCAGATGATGACACTGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR TCA 90 bp GGGTGCCACCGCCGTTTCCAGGCACTTTTTCTGCTAGACGCTCAAGACAAGAGACTGGGGTCTGTAATCTaGCTCTGTCCTTGTGGATTA +
Preference number: 4 (lower is better)
Translates to: GCHRRFQALFLLDAQDKRLGSVI*LCPCGL
Trigger: TAATCCACAAGGACAGAGTCAGATTACAGACCCCAG...TCTCTTGTCTTGAGCGTCTAGCAGAAAAAGTGCCTGGAAACGGCGGTGGCACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR TCA 90 bp CTGAATGATGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGACCGAGGGACATGCCTaGGGTGACTGGCGGGGTGTA +
Preference number: 4 (lower is better)
Translates to: LNDGTVMEASILPHVPLVTEGHA*GDWRGV
Trigger: TACACCCCGCCAGTCACCTCAGGCATGTCCCTCGGT...CACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCATCATTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp GAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCAAATCTCTGCTACCACTGGGCCACTGCTaGGGAATTTCAATATGGTCG +
Preference number: 4 (lower is better)
Translates to: EKDQRTRGPLGFEGKSLLPLGHC*GISIWS
Trigger: CGACCATATTGAAATTCCTCAGCAGTGGCCCAGTGG...TAGCAGAGATTTGCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp TCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCGGAATTGCCAATGAAGGGACCCTaGCTTTTCGGGGAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: SCFHVLTWILGQSLSSELPMKGP*LFGEES
Trigger: GCTCTCCTCCCCGAAAAGTCAGGGTCCCTTCATTGG...CAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp GCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCAAGGGCTCTGGCAAGTaGGAGGCAGTGAGACCGTCT +
Preference number: 4 (lower is better)
Translates to: ANASCFHVLTWILGQSLSKGSGK*EAVRPS
Trigger: AGACGGTCTCACTGCCTCTCACTTGCCAGAGCCCTT...GGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp AAATGCTTGGGAACTGCCTGGGGTCTGAAAAAGGGCCCAGTTCTGAAGCACCTGATGGTGTCACTGTGCTaGAGAGGCTGTTTGATGCCA +
Preference number: 4 (lower is better)
Translates to: KCLGTAWGLKKGPVLKHLMVSLC*RGCLMP
Trigger: TGGCATCAAACAGCCTCTTCAGCACAGTGACACCAT...CAGGTGCTTCAGAACTGGGCCCTTTTTCAGACCCCAGGCAGTTCCCAAGCATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR GCA 90 bp TGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAGAACCACGGCCGCCGCCTCCTGCTaGTGCTGCTGCTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: CIEKTANSSNVCATKRTTAAASC*CCCCCC
Trigger: GCAGCAACAGCAGCAGCAGCAGCAGGAGGCGGCGGC...CGTGGTTCTCTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp AACGTCACCAGAGATGGATGCCCCACCAACGCTGGAGCTGGCCTCGCTGCTGCTCAGATCGTTGAACCTTaGTACTTGGTTTTTCATAAC +
Preference number: 4 (lower is better)
Translates to: NVTRDGCPTNAGAGLAAAQIVEP*YLVFHN
Trigger: GTTATGAAAAACCAAGTAGCAAGGTTCAACGATCTG...AGCAGCAGCGAGGCCAGCTCCAGCGTTGGTGGGGCATCCATCTCTGGTGACGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR GCA 90 bp GTAGAGATATGGAGTGCTGCTGGTCTGGAAGGGTCCACTCTGGCTTTGGGAAGAATTAAAAGGACTTGGTaGAGAGTTCAGGGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: VEIWSAAGLEGSTLALGRIKRTW*RVQGGP
Trigger: CGGCCCTCCCTGAACTCTGCACCAAGTCCTTTTAAT...TCTTCCCAAAGCCAGAGTGGACCCTTCCAGACCAGCAGCACTCCATATCTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483377.5
ENST00000646519.1
CDS-3UTR GCA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATTTGGATTTAATAGCGTaGTGCCATTCGAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNLDLIA*CHSRWW
Trigger: CCACCACCTCGAATGGCAGCACGCTATTAAATCCAA...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TGCTATGAAGCCTGGCGATTTAGAGTTTTGCTTAACTATGAAACCACAGAACATATGGTGCGGTTGTCGTaGGGCGGCCGCAACCGGGGC +
Preference number: 4 (lower is better)
Translates to: CYEAWRFRVLLNYETTEHMVRLS*GGRNRG
Trigger: GCCCCGGTTGCGGCCGCCCCACGACAACCGCACCAT...ATGTTCTGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCAGGCTTCATAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CTTGAGCCTTCTGCTTCTCAATATCTACCCTCTTATGGCTGCAAGATCATGACTACGAGTTCGGCCGGGTaGTCGGCGATGATCTCCACC +
Preference number: 4 (lower is better)
Translates to: LEPSASQYLPSYGCKIMTTSSAG*SAMIST
Trigger: GGTGGAGATCATCGCCGACCACCCGGCCGAACTCGT...AGTCATGATCTTGCAGCCATAAGAGGGTAGATATTGAGAAGCAGAAGGCTCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CTGTCCTTGTGGATTAAAAGGACTTGGTGCAGAGTTCAGGGAGGGCCGTGGGTTCACCTACTCTCATACTaGGATGAGGAATGCGCCCTA +
Preference number: 4 (lower is better)
Translates to: LSLWIKRTWCRVQGGPWVHLLSY*DEECAL
Trigger: TAGGGCGCATTCCTCATCCCAGTATGAGAGTAGGTG...AACCCACGGCCCTCCCTGAACTCTGCACCAAGTCCTTTTAATCCACAAGGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR CCA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGTGGATTAAAAGGACTTaGTGCAGAGTTCAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLRWIKRT*CRVQGG
Trigger: CCCTCCCTGAACTCTGCACCAAGTCCTTTTAATCCA...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATTGGATTAAAAGGACTTaGTGCAGAGTTCAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNWIKRT*CRVQGG
Trigger: CCCTCCCTGAACTCTGCACCAAGTCCTTTTAATCCA...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAAAGCGGGGTGGTAGAGTaGATGGACGGGGACGTCATC +
Preference number: 4 (lower is better)
Translates to: WYCDGSIHSTSCPFSAPQSGVVE*MDGDVI
Trigger: GATGACGTCCCCGTCCATCCACTCTACCACCCCGCT...TTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AAAGGTGGGTTTGAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCTCTGAAGCACCTGCCTaGCTCTTCTTACTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: KGGFEKDQRTRGPLGFEGSEAPA*LFLLRV
Trigger: CACTCTCAGTAAGAAGAGCCAGGCAGGTGCTTCAGA...GCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTCAAACCCACCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359524.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CAAAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTGTAAGTAAAGGTGGCTaGATAGTGCATTCGTGGGTT +
Preference number: 4 (lower is better)
Translates to: QRLSVGPRGPYVLSAQLPVSKGG*IVHSWV
Trigger: AACCCACGAATGCACTATCCAGCCACCTTTACTTAC...AGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TCTGTGCCTTCTGGGTTCCCGAGGTCCATCTACTGTAACTTTAATTGCTCTGTGGGAGTGCTGCTGGTCTaGAAGGGTCCACTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: SVPSGFPRSIYCNFNCSVGVLLV*KGPLWL
Trigger: AAGCCAGAGTGGACCCTTCCAGACCAGCAGCACTCC...CACAGAGCAATTAAAGTTACAGTAGATGGACCTCGGGAACCCAGAAGGCACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR CCA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGGCCATAGTAGAGATATaGAGTGCTGCTGGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLRAIVEI*SAAGLE
Trigger: TTCCAGACCAGCAGCACTCCATATCTCTACTATGGC...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATGCCATAGTAGAGATATaGAGTGCTGCTGGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNAIVEI*SAAGLE
Trigger: TTCCAGACCAGCAGCACTCCATATCTCTACTATGGC...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTATGGCGGAAGCATTCTaGAAGGAGACCGGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPMAEAF*KETGLP
Trigger: GGGGAGACCGGTCTCCTTCCAGAATGCTTCCGCCAT...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCGGAATTGCGAGGTGGTGGTGCATaGCGGAAGCATTCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: SCFHVLTWILGQSLSSELRGGGA*RKHSGR
Trigger: CCTTCCAGAATGCTTCCGCCATGCACCACCACCTCG...CAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AGCCCCTTGCCCTCCTTGGCCCTCCATTGTAAGAAATACAAATGTCAAAGGCTGGCCCCCAGATACCACTaGGCCACTGCTGAGGAATTT +
Preference number: 4 (lower is better)
Translates to: SPLPSLALHCKKYKCQRLAPRYH*ATAEEF
Trigger: AAATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGC...CAGCCTTTGACATTTGTATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTGCTTTGGTAAGGCTGGTTaGTTAAGAATCTCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: KAVCRSPWAICPLSSATCFGKAG*LRISGA
Trigger: TGCACCAGAGATTCTTAACCAACCAGCCTTACCAAA...GCAGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTGCCCAGGAACTAGTACATaGTTCCACAGTAGTAGTAAG +
Preference number: 4 (lower is better)
Translates to: KAVCRSPWAICPLSSATCPGTST*FHSSSK
Trigger: CTTACTACTACTGTGGAACCATGTACTAGTTCCTGG...GCAGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGATTTTGAAAGGGCTCTaGCAAGTGAGAGGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLRILKGL*QVRGSE
Trigger: CTCACTGCCTCTCACTTGCCAGAGCCCTTTCAAAAT...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTCTCTGTTGGTCTCGGTaGCTGGTAGTGACCTGCGGA +
Preference number: 4 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPLCWSR*LVVTCG
Trigger: TCCGCAGGTCACTACCAGCCACCGAGACCAACAGAG...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371432.7
ENST00000371438.5
ENST00000647337.2
CDS-3UTR CCA 90 bp AAATGCTTGGGAACTGCCTGGGGTCTGAAAAAGGGCCCAGTTCTGAAGCACCTGTTCTTGCTGTCCTCCTaGAGAAAGTTTGCACCGCAC +
Preference number: 4 (lower is better)
Translates to: KCLGTAWGLKKGPVLKHLFLLSS*RKFAPH
Trigger: GTGCGGTGCAAACTTTCTCCAGGAGGACAGCAAGAA...CAGGTGCTTCAGAACTGGGCCCTTTTTCAGACCCCAGGCAGTTCCCAAGCATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR CCA 90 bp CTTGAGCCTTCTGCTTCTCAATATCTACCCTCTTATGGCTGCAAGATCATGACTGGTGGTGAAGCGGTGTaGGTTCAGCAGTCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LEPSASQYLPSYGCKIMTGGEAV*VQQSSP
Trigger: GGGGCTGGACTGCTGAACCCACACCGCTTCACCACC...AGTCATGATCTTGCAGCCATAAGAGGGTAGATATTGAGAAGCAGAAGGCTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR CCA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTCCGCAAGCCTGCTGGTaGAGCTTCAGCTTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPPQACW*SFSLSV
Trigger: CACTGACAAGCTGAAGCTCCACCAGCAGGCTTGCGG...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR TCA 90 bp TGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAGAACCACGCGAGGGCTACCACCTTaGAGGCCACGGGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: CIEKTANSSNVCATKRTTRGLPP*RPRAGS
Trigger: AGACCCTGCCCGTGGCCTTCAAGGTGGTAGCCCTCG...CGTGGTTCTCTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp GAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCAAATCTCTGCTACTTGGGGAGGATTTGTaGAGACGGTTATGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: EKDQRTRGPLGFEGKSLLLGEDL*RRLWSR
Trigger: CCTTGACCATAACCGTCTTCACAAATCCTCCCCAAG...TAGCAGAGATTTGCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp TCAGAGGTGGCAGTGTCATCATCTGAAATGCGCCTAGGCACATCGGTGATGGCACTGGGGTCTGTAATCTaGCTCTGTCCTTGTGGATTA +
Preference number: 4 (lower is better)
Translates to: SEVAVSSSEMRLGTSVMALGSVI*LCPCGL
Trigger: TAATCCACAAGGACAGAGTCAGATTACAGACCCCAG...TGCCATCACCGATGTGCCTAGGCGCATTTCAGATGATGACACTGCCACCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR TCA 90 bp AGCCCCTTGCCCTCCTTGGCCCTCCATTGTAAGAAATACAAATGTCAAAGGCTGGCTCTCAGTGAGGGATaGAATGCTTGGGAACTGCCT +
Preference number: 4 (lower is better)
Translates to: SPLPSLALHCKKYKCQRLALSEG*NAWELP
Trigger: AGGCAGTTCCCAAGCATTTCATCCCTCACTGAGAGC...CAGCCTTTGACATTTGTATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CAGATGGTCCCTAATGGTGTGGACTTCTCTGCTCATTTTGAAAGGGCTCTGGCAGCTCTCAGTGAGGGATaGAATGCTTGGGAACTGCCT +
Preference number: 4 (lower is better)
Translates to: QMVPNGVDFSAHFERALAALSEG*NAWELP
Trigger: AGGCAGTTCCCAAGCATTTCATCCCTCACTGAGAGC...TGCCAGAGCCCTTTCAAAATGAGCAGAGAAGTCCACACCATTAGGGACCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAAACTGATAGGATCCTaGCGAAGTGCCATAGTAGAG +
Preference number: 4 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLRKLIGS*RSAIVE
Trigger: CTCTACTATGGCACTTCGTCAGGATCCTATCAGTTT...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp GAAGCACCTGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGCAGAAGTCAAAACTGATAGGATCCTaGCGAAGTGCCATAGTAGAG +
Preference number: 4 (lower is better)
Translates to: EAPAWLFLLRVEGQRQKSKLIGS*RSAIVE
Trigger: CTCTACTATGGCACTTCGTCAGGATCCTATCAGTTT...TGACTTCTGCCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCAGGTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483377.5
ENST00000646519.1
CDS-3UTR TCA 90 bp TGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGCAGAAGTCAGAGGTGGCGGTGGTGTCATTAGATaGTCCTTGTTTGGATTAAGG +
Preference number: 4 (lower is better)
Translates to: CLALLTESGRPEAEVRGGGGVIR*SLFGLR
Trigger: CCTTAATCCAAACAAGGATCATCTAATGACACCACC...GCCACCTCTGACTTCTGCCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR TCA 90 bp GTAGAGATATGGAGTGCTGCTGGTCTGGAAGGGTCCACTCTGGCTTTGGGAAGACTACAAAGGTGGGTTTaGGAAGGACCAGAGAACAAG +
Preference number: 4 (lower is better)
Translates to: VEIWSAAGLEGSTLALGRLQRWV*EGPENK
Trigger: CTTGTTCTCTGGTCCTTCTCAAACCCACCTTTGTAG...TCTTCCCAAAGCCAGAGTGGACCCTTCCAGACCAGCAGCACTCCATATCTCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR TCA 90 bp GAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCAAATCTCTGCTAGCAAGTGAGAGGCAGTaGGACCGTCTAAAGAGCAAA +
Preference number: 4 (lower is better)
Translates to: EKDQRTRGPLGFEGKSLLASERQ*DRLKSK
Trigger: TTTGCTCTTTAGACGGTCTCACTGCCTCTCACTTGC...TAGCAGAGATTTGCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp TGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAAAAGGGCTCTGGCAAGTaGGAGGCAGTGAGACCGTCT +
Preference number: 4 (lower is better)
Translates to: WYCDGSIHSTSCPFSAPQKGSGK*EAVRPS
Trigger: AGACGGTCTCACTGCCTCTCACTTGCCAGAGCCCTT...TTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp GTGAAAGAGTGTTTCTCTAAGCATCCTTCGCAGGGTGCCACCGCCGTTTCCAGGCAAAAGAAGTTTTGCTaGCATGGTGTCACTGTGCTG +
Preference number: 4 (lower is better)
Translates to: VKECFSKHPSQGATAVSRQKKFC*HGVTVL
Trigger: CAGCACAGTGACACCATGTCAGCAAAACTTCTTTTG...CCTGGAAACGGCGGTGGCACCCTGCGAAGGATGCTTAGAGAAACACTCTTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR TCA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGCAAAAGAAGTTTTGCTaGCATGGTGTCACTGTGCTG +
Preference number: 4 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLRQKKFC*HGVTVL
Trigger: CAGCACAGTGACACCATGTCAGCAAAACTTCTTTTG...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000647337.2
CDS-3UTR GCA 90 bp ACTTTTGCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCTCACGTCGCTCATTTTaGCGGGCTGCAGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TFANASCFHVLTWILGQSSRRSF*RAAGCW
Trigger: CCAGCAGCCTGCAGCCCGGCAAAATGAGCGACGTGA...GGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGCAAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp TCCTTAAAGCTGTACACACATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTGCTGCTGTTGCTGCTaGTGTTGCGCAGCCACCACC +
Preference number: 4 (lower is better)
Translates to: SLKLYTHLLPSEFITDGPCCCCC*CCAATT
Trigger: GGTGGTGGCTGCGCAACAGCAGCAGCAACAGCAGCA...GGGACCATCTGTGATAAATTCAGAAGGGAGGAGATGTGTGTACAGCTTTAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp ACTTTTGCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCTGCTGCTGTTGCTGCTaGTGTTGCGCAGCCACCACC +
Preference number: 4 (lower is better)
Translates to: TFANASCFHVLTWILGQSCCCCC*CCAATT
Trigger: GGTGGTGGCTGCGCAACAGCAGCAGCAACAGCAGCA...GGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGCAAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp CTGAATGATGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGTGCTGCTGTTGCTGCTaGTGTTGCGCAGCCACCACC +
Preference number: 4 (lower is better)
Translates to: LNDGTVMEASILPHVPLVCCCCC*CCAATT
Trigger: GGTGGTGGCTGCGCAACAGCAGCAGCAACAGCAGCA...CACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCATCATTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp AGCCCCTTGCCCTCCTTGGCCCTCCATTGTAAGAAATACAAATGTCAAAGGCTGTCAAGCTTCTGTCTGTaGCTTCTGGGTTCCCGAGGT +
Preference number: 4 (lower is better)
Translates to: SPLPSLALHCKKYKCQRLSSFCL*LLGSRG
Trigger: ACCTCGGGAACCCAGAAGGCACAGACAGAAGCTTGA...CAGCCTTTGACATTTGTATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp ACTTTTGCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCGGCGGGGAAGACTGTaGCTGCCTGGGGTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: TFANASCFHVLTWILGQSRRGRL*LPGVCN
Trigger: ATTACAGACCCCAGGCAGGCACAGTCTTCCCCGCCG...GGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGCAAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp GAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCAAATCTCTGCTAGAAATGCTTGGGAACTaGCTGGGGTCTGAAAAAGGG +
Preference number: 4 (lower is better)
Translates to: EKDQRTRGPLGFEGKSLLEMLGN*LGSEKG
Trigger: CCCTTTTTCAGACCCCAGGCAGTTCCCAAGCATTTC...TAGCAGAGATTTGCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAGGATCCTGACGAAGTaGCATAGTAGAGATATGGAG +
Preference number: 4 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLRRILTK*HSRDME
Trigger: CTCCATATCTCTACTATGGCACTTCGTCAGGATCCT...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTCATTCGAGGTGGTGGTaGATGGCGGAAGCATTCTGG +
Preference number: 4 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPHSRWW*MAEAFW
Trigger: CCAGAATGCTTCCGCCATGCACCACCACCTCGAATG...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp GCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTGGTCCATACACAGCTaGCACCGTGAGGGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: ANASCFHVLTWILGQSLSWSIHS*HREGVK
Trigger: CTTCACACCCTCACGGTGGCAGCTGTGTATGGACCA...GGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGTCTCTGGTGCAATTTTaGTCTCCTGTACTAGGTGTC +
Preference number: 4 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLRSLVQF*SPVLGV
Trigger: GACACCTAGTACAGGAGAGCAAAATTGCACCAGAGA...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp ACTTTTGCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCCCCACACGCTGTCCTaGAATGCTGGGTGGCCTACA +
Preference number: 4 (lower is better)
Translates to: TFANASCFHVLTWILGQSPHTLS*NAGWPT
Trigger: TGTAGGCCACCCAGCATTGCAGGACAGCGTGTGGGG...GGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGCAAAAGT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp TCCTTAAAGCTGTACACACATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTTTGATGAGGCCGACTaGCGGGCGGAGTCTGATGGG +
Preference number: 4 (lower is better)
Translates to: SLKLYTHLLPSEFITDGPFDEAD*RAESDG
Trigger: CCCATCAGACTCCGCCCGGCAGTCGGCCTCATCAAA...GGGACCATCTGTGATAAATTCAGAAGGGAGGAGATGTGTGTACAGCTTTAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR CCA 90 bp GGGTGTGAGGCGCAACCGGGTCTGTTTCACGCTGAAACGCTAGGGCCGTGCTTTTTGAACCTTGCTACTTaGTTTTTCATAACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: GCEAQPGLFHAETLGPCFLNLAT*FFITAE
Trigger: CTCTGCTGTTATGAAAAACCAAGTAGCAAGGTTCAA...AAAGCACGGCCCTAGCGTTTCAGCGTGAAACAGACCCGGTTGCGCCTCACACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR CCA 90 bp AAAGGTGGGTTTGAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCTGGATTAAAAGGACTTaGTGCAGAGTTCAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: KGGFEKDQRTRGPLGFEGWIKRT*CRVQGG
Trigger: CCCTCCCTGAACTCTGCACCAAGTCCTTTTAATCCA...GCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTCAAACCCACCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATCTGACTCTGTCCTTGTaGATTAAAAGGACTTGGTGC +
Preference number: 4 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNLTLSL*IKRTWC
Trigger: GCACCAAGTCCTTTTAATCCACAAGGACAGAGTCAG...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CTCTGTCCTTGTGGATTAAAAGGACTTGGTGCAGAGTTCAGGGAGGGCCGTGGGCTGACTCTGTCCTTGTaGATTAAAAGGACTTGGTGC +
Preference number: 4 (lower is better)
Translates to: LCPCGLKGLGAEFREGRGLTLSL*IKRTWC
Trigger: GCACCAAGTCCTTTTAATCCACAAGGACAGAGTCAG...CCCACGGCCCTCCCTGAACTCTGCACCAAGTCCTTTTAATCCACAAGGACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR CCA 90 bp CTGAATGATGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGAGCGGGGTGGTAGAGTaGATGGACGGGGACGTCATC +
Preference number: 4 (lower is better)
Translates to: LNDGTVMEASILPHVPLVSGVVE*MDGDVI
Trigger: GATGACGTCCCCGTCCATCCACTCTACCACCCCGCT...CACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCATCATTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp GTAGAGATATGGAGTGCTGCTGGTCTGGAAGGGTCCACTCTGGCTTTGGGAAGAGGCAGAAGTCAGAGGTaGCAGTGTCATCATCTGAAA +
Preference number: 4 (lower is better)
Translates to: VEIWSAAGLEGSTLALGRGRSQR*QCHHLK
Trigger: TTTCAGATGATGACACTGCCACCTCTGACTTCTGCC...TCTTCCCAAAGCCAGAGTGGACCCTTCCAGACCAGCAGCACTCCATATCTCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR CCA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTTGCTTGGGAACTGCCTaGGGTCTGAAAAAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPCLGTA*GLKKGP
Trigger: TGGGCCCTTTTTCAGACCCCAGGCAGTTCCCAAGCA...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp GAAGCACCTGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGCAGAAGTCAGTAAGTAAAGGTGGCTaGATAGTGCATTCGTGGGTT +
Preference number: 4 (lower is better)
Translates to: EAPAWLFLLRVEGQRQKSVSKGG*IVHSWV
Trigger: AACCCACGAATGCACTATCCAGCCACCTTTACTTAC...TGACTTCTGCCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCAGGTGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483377.5
ENST00000646519.1
CDS-3UTR CCA 90 bp TCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCGGAATTGTGTGGTAGTGAGTGGTaGCGGACATACCGAGGGACA +
Preference number: 4 (lower is better)
Translates to: SCFHVLTWILGQSLSSELCGSEW*RTYRGT
Trigger: TGTCCCTCGGTATGTCCGCCACCACTCACTACCACA...CAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CTGAATGATGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGTGGAAGGGTCCACTCTaGCTTTGGGAAGAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: LNDGTVMEASILPHVPLVWKGPL*LWEEPG
Trigger: CCCCGGCTCTTCCCAAAGCCAGAGTGGACCCTTCCA...CACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCATCATTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp GTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAACTGGTTTATGGCGGAAGCATTCTaGAAGGAGACCGGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: VMEASILPHVPLVHLNWFMAEAF*KETGLP
Trigger: GGGGAGACCGGTCTCCTTCCAGAATGCTTCCGCCAT...AAACCAGTTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTTGCCATTCGAGGTGGTaGTGCATGGCGGAAGCATTC +
Preference number: 4 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPCHSRW*CMAEAF
Trigger: GAATGCTTCCGCCATGCACCACCACCTCGAATGGCA...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TCCTTAAAGCTGTACACACATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCGTCTGCGGAGGGCACTaGTCCATACACAGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: SLKLYTHLLPSEFITDGPVCGGH*SIHSCH
Trigger: GTGGCAGCTGTGTATGGACCAGTGCCCTCCGCAGAC...GGGACCATCTGTGATAAATTCAGAAGGGAGGAGATGTGTGTACAGCTTTAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AGCCCCTTGCCCTCCTTGGCCCTCCATTGTAAGAAATACAAATGTCAAAGGCTGGCCCCTTGCCCTCCTTaGCCCTCCATTGTAAGAAAT +
Preference number: 4 (lower is better)
Translates to: SPLPSLALHCKKYKCQRLAPCPP*PSIVRN
Trigger: ATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGC...CAGCCTTTGACATTTGTATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTGCCACAATCATGACCTGTaGCACAAAGCGGAATTTTTA +
Preference number: 4 (lower is better)
Translates to: KAVCRSPWAICPLSSATCHNHDL*HKAEFL
Trigger: TAAAAATTCCGCTTTGTGCCACAGGTCATGATTGTG...GCAGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TTGCTTGAGAAACAAAGCCTTCCCTCCTCCCAAGTTGAAAGAAATAAAGGAGTCACAGGCAGGGATGCCTaGTGCAAGCGATCCCTCGGC +
Preference number: 4 (lower is better)
Translates to: LLEKQSLPSSQVERNKGVTGRDA*CKRSLG
Trigger: GCCGAGGGATCGCTTGCACCAGGCATCCCTGCCTGT...GACTCCTTTATTTCTTTCAACTTGGGAGGAGGGAAGGCTTTGTTTCTCAAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478660.6
3UTR CAA 72 bp AGATGGTCCCTAATGGTGTGGACTTCTCTGCTCATTTaGAAAGGGCTCTGGCAAGTGAGAGGCAGTGAGACC +
Preference number: 4 (lower is better)
Translates to: RWSLMVWTSLLI*KGLWQVRGSET
Trigger: GGTCTCACTGCCTCTCACTTGCCAGAGCCCTTTCAAAATGAGCAGAGAAGTCCACACCATTAGGGACCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR CAA 72 bp CTGTGCCTGCCTGGGGTCTGTAATCTGACTCTGTCCTaGTGGATTAAAAGGACTTGGTGCAGAGTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: LCLPGVCNLTLS*WIKRTWCRVQG
Trigger: TCCCTGAACTCTGCACCAAGTCCTTTTAATCCACAAGGACAGAGTCAGATTACAGACCCCAGGCAGGCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR TCA 90 bp GCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCCGGTTATGGTCAAGGTaGAACTCTTGCCTCGTCCAC +
Preference number: 4 (lower is better)
Translates to: ANASCFHVLTWILGQSLSRLWSR*NSCLVH
Trigger: GTGGACGAGGCAAGAGTTTCACCTTGACCATAACCG...GGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp TCTGTGCCTTCTGGGTTCCCGAGGTCCATCTACTGTAACTTTAATTGCTCTGTGTGCGCCCTAAATCACTaGGGCGGTCAGAGAACAAAC +
Preference number: 4 (lower is better)
Translates to: SVPSGFPRSIYCNFNCSVCALNH*GGQRTN
Trigger: GTTTGTTCTCTGACCGCCTCAGTGATTTAGGGCGCA...CACAGAGCAATTAAAGTTACAGTAGATGGACCTCGGGAACCCAGAAGGCACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR TCA 90 bp ACTAGGACCAGAGAGCCCTTTCCTGCTATTTGCTTGAGAAACAAAGCCTTCCCTTGCGCCCTAAATCACTaGGGCGGTCAGAGAACAAAC +
Preference number: 4 (lower is better)
Translates to: TRTREPFPAICLRNKAFPCALNH*GGQRTN
Trigger: GTTTGTTCTCTGACCGCCTCAGTGATTTAGGGCGCA...AGGGAAGGCTTTGTTTCTCAAGCAAATAGCAGGAAAGGGCTCTCTGGTCCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR TCA 90 bp GAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCAAATCTCTGCTAACTCTCATACTGGGATaGGGAATGCGCCCTAAATCA +
Preference number: 4 (lower is better)
Translates to: EKDQRTRGPLGFEGKSLLTLILG*GMRPKS
Trigger: TGATTTAGGGCGCATTCCTCATCCCAGTATGAGAGT...TAGCAGAGATTTGCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp GAACCTTGCTACTTGGTTTTTCATAACAGCAGAGGCATTCCGGAGCTCAGCAGAGCTCTCAGTGAGGGATaGAATGCTTGGGAACTGCCT +
Preference number: 4 (lower is better)
Translates to: EPCYLVFHNSRGIPELSRALSEG*NAWELP
Trigger: AGGCAGTTCCCAAGCATTTCATCCCTCACTGAGAGC...TCTGCTGAGCTCCGGAATGCCTCTGCTGTTATGAAAAACCAAGTAGCAAGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR TCA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTAGAAGCGGCTCTCAGTaGGGGATGAAATGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPRSGSQ*GMKCLG
Trigger: TCCCAAGCATTTCATCCCTCACTGAGAGCCGCTTCT...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTCCACTGGGCCACTGCTaGGGAATTTCAATATGGTCG +
Preference number: 4 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPPLGHC*GISIWS
Trigger: CGACCATATTGAAATTCCTCAGCAGTGGCCCAGTGG...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp ACTTTTGCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCTGCTCTTCTCCCTCCTaGACCTGGAGTCCACCTCTC +
Preference number: 4 (lower is better)
Translates to: TFANASCFHVLTWILGQSCSSPS*TWSPPL
Trigger: GAGAGGTGGACTCCAGGTTCAGGAGGGAGAAGAGCA...GGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGCAAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp GAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCAAATCTCTGCTAACTCCCAAAGGACAGTaGTGTCATTCTGCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: EKDQRTRGPLGFEGKSLLTPKGQ*CHSAPL
Trigger: TAGAGGAGCAGAATGACATCACTGTCCTTTGGGAGT...TAGCAGAGATTTGCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CTTGAGCCTTCTGCTTCTCAATATCTACCCTCTTATGGCTGCAAGATCATGACTCCAATGAAGGGACCCTaGCTTTTCGGGGAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LEPSASQYLPSYGCKIMTPMKGP*LFGEES
Trigger: GCTCTCCTCCCCGAAAAGTCAGGGTCCCTTCATTGG...AGTCATGATCTTGCAGCCATAAGAGGGTAGATATTGAGAAGCAGAAGGCTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp AGCCCCTTGCCCTCCTTGGCCCTCCATTGTAAGAAATACAAATGTCAAAGGCTGGGGGCCGTTAGGGTTTaGAGGCAAATCTCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: SPLPSLALHCKKYKCQRLGAVRV*RQISAK
Trigger: TTTAGCAGAGATTTGCCTTCAAACCCTAACGGCCCC...CAGCCTTTGACATTTGTATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CAAAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTAAAATGTGGCTGCATTaGAAAGACTGCAAATTCCAG +
Preference number: 4 (lower is better)
Translates to: QRLSVGPRGPYVLSAQLPKMWLH*KDCKFQ
Trigger: CTGGAATTTGCAGTCTTTTCAATGCAGCCACATTTT...AGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CAGATGGTCCCTAATGGTGTGGACTTCTCTGCTCATTTTGAAAGGGCTCTGGCAACTCATCCACAATCATaGCCTGTGGCACAAAGCGGA +
Preference number: 4 (lower is better)
Translates to: QMVPNGVDFSAHFERALATHPQS*PVAQSG
Trigger: TCCGCTTTGTGCCACAGGTCATGATTGTGGATGAGT...TGCCAGAGCCCTTTCAAAATGAGCAGAGAAGTCCACACCATTAGGGACCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CAGATGGTCCCTAATGGTGTGGACTTCTCTGCTCATTTTGAAAGGGCTCTGGCAATGGTGTCACTGTGCTaGAGAGGCTGTTTGATGCCA +
Preference number: 4 (lower is better)
Translates to: QMVPNGVDFSAHFERALAMVSLC*RGCLMP
Trigger: TGGCATCAAACAGCCTCTTCAGCACAGTGACACCAT...TGCCAGAGCCCTTTCAAAATGAGCAGAGAAGTCCACACCATTAGGGACCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371432.7
ENST00000371438.5
ENST00000647337.2
CDS-3UTR GCA 90 bp GCTTATTTATCTAAGCATACTTGGTATACGGCCTTTAGAAGGCAAAGTGTTTTGGCCGCCGCCTCCTGCTaGTGCTGCTGCTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: AYLSKHTWYTAFRRQSVLAAASC*CCCCCC
Trigger: GCAGCAACAGCAGCAGCAGCAGCAGGAGGCGGCGGC...CAAAACACTTTGCCTTCTAAAGGCCGTATACCAAGTATGCTTAGATAAATAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp AATGCGCCTAGGCACATCGGTGATGGCAGGAAGCCCAGTGCCCCGTGTGGAAGATACTGTAACTTTAATTaGTCTGTGATAGGTAGCTAC +
Preference number: 4 (lower is better)
Translates to: NAPRHIGDGRKPSAPCGRYCNFN*SVIGSY
Trigger: GTAGCTACCTATCACAGAGCAATTAAAGTTACAGTA...TCTTCCACACGGGGCACTGGGCTTCCTGCCATCACCGATGTGCCTAGGCGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR GCA 90 bp TCTGTGCCTTCTGGGTTCCCGAGGTCCATCTACTGTAACTTTAATTGCTCTGTGTCAAGCTTCTGTCTGTaGCTTCTGGGTTCCCGAGGT +
Preference number: 4 (lower is better)
Translates to: SVPSGFPRSIYCNFNCSVSSFCL*LLGSRG
Trigger: ACCTCGGGAACCCAGAAGGCACAGACAGAAGCTTGA...CACAGAGCAATTAAAGTTACAGTAGATGGACCTCGGGAACCCAGAAGGCACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR GCA 90 bp AGCCCCTTGCCCTCCTTGGCCCTCCATTGTAAGAAATACAAATGTCAAAGGCTGATTAAAAGGACTTGGTaGAGAGTTCAGGGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: SPLPSLALHCKKYKCQRLIKRTW*RVQGGP
Trigger: CGGCCCTCCCTGAACTCTGCACCAAGTCCTTTTAAT...CAGCCTTTGACATTTGTATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp AGCCCCTTGCCCTCCTTGGCCCTCCATTGTAAGAAATACAAATGTCAAAGGCTGGAAATGCTTGGGAACTaGCTGGGGTCTGAAAAAGGG +
Preference number: 4 (lower is better)
Translates to: SPLPSLALHCKKYKCQRLEMLGN*LGSEKG
Trigger: CCCTTTTTCAGACCCCAGGCAGTTCCCAAGCATTTC...CAGCCTTTGACATTTGTATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp GTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAACTGGTTTCATTCGAGGTGGTGGTaGATGGCGGAAGCATTCTGG +
Preference number: 4 (lower is better)
Translates to: VMEASILPHVPLVHLNWFHSRWW*MAEAFW
Trigger: CCAGAATGCTTCCGCCATGCACCACCACCTCGAATG...AAACCAGTTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp AGCCCCTTGCCCTCCTTGGCCCTCCATTGTAAGAAATACAAATGTCAAAGGCTGAAACAGTTGGGGAACTaGTGTGGCTTCCATCAGCGT +
Preference number: 4 (lower is better)
Translates to: SPLPSLALHCKKYKCQRLKQLGN*CGFHQR
Trigger: ACGCTGATGGAAGCCACAGCAGTTCCCCAACTGTTT...CAGCCTTTGACATTTGTATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp CAAAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTGTTAAGAATCTCTGGTaGAATTTTGCTCTCCTGTAC +
Preference number: 4 (lower is better)
Translates to: QRLSVGPRGPYVLSAQLPVKNLW*NFALLY
Trigger: GTACAGGAGAGCAAAATTGCACCAGAGATTCTTAAC...AGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp CAGATGGTCCCTAATGGTGTGGACTTCTCTGCTCATTTTGAAAGGGCTCTGGCAAATCTGCCATGTGACTaGCAGGAGTGGTCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: QMVPNGVDFSAHFERALANLPCD*QEWSKC
Trigger: GCACTTTGACCACTCCTGGCAGTCACATGGCAGATT...TGCCAGAGCCCTTTCAAAATGAGCAGAGAAGTCCACACCATTAGGGACCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp AGCCCCTTGCCCTCCTTGGCCCTCCATTGTAAGAAATACAAATGTCAAAGGCTGAATCTGCCATGTGACTaGCAGGAGTGGTCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: SPLPSLALHCKKYKCQRLNLPCD*QEWSKC
Trigger: GCACTTTGACCACTCCTGGCAGTCACATGGCAGATT...CAGCCTTTGACATTTGTATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp AAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTGCTTTGGATTAAGGATTTaGACTTGGAAATCTGCCATG +
Preference number: 4 (lower is better)
Translates to: KAVCRSPWAICPLSSATCFGLRI*TWKSAM
Trigger: CATGGCAGATTTCCAAGTGCAAATCCTTAATCCAAA...GCAGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp AAAGGTGGGTTTGAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCAAATGGACAGTGGTGTaGTTCAAGCTACCACACACA +
Preference number: 4 (lower is better)
Translates to: KGGFEKDQRTRGPLGFEGKWTVV*FKLPHT
Trigger: TGTGTGTGGTAGCTTGAAGCACACCACTGTCCATTT...GCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTCAAACCCACCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AATCATGACCTGTGGCACAAAGCGGAATTTTTACAATATGTGCATGGAAAGCAAGTTCAGGGAGGGCCGTaGGTTCTGAGGCGGGACACC +
Preference number: 4 (lower is better)
Translates to: NHDLWHKAEFLQYVHGKQVQGGP*VLRRDT
Trigger: GGTGTCCCGCCTCAGAACCCACGGCCCTCCCTGAAC...TTGCTTTCCATGCACATATTGTAAAAATTCCGCTTTGTGCCACAGGTCATGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAATGCTTGGGAACTGCCTaGGGTCTGAAAAAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: WYCDGSIHSTSCPFSAPQCLGTA*GLKKGP
Trigger: TGGGCCCTTTTTCAGACCCCAGGCAGTTCCCAAGCA...TTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCGGAATTGTGGATAGTGCATTCGTaGGTTGGAGAAGCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: SCFHVLTWILGQSLSSELWIVHS*VGEAAL
Trigger: GAGAGCCGCTTCTCCAACCCACGAATGCACTATCCA...CAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CTGTCCTTGTGGATTAAAAGGACTTGGTGCAGAGTTCAGGGAGGGCCGTGGGTTGTAAGTAAAGGTGGCTaGATAGTGCATTCGTGGGTT +
Preference number: 4 (lower is better)
Translates to: LSLWIKRTWCRVQGGPWVVSKGG*IVHSWV
Trigger: AACCCACGAATGCACTATCCAGCCACCTTTACTTAC...AACCCACGGCCCTCCCTGAACTCTGCACCAAGTCCTTTTAATCCACAAGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR CCA 90 bp CTTGAGCCTTCTGCTTCTCAATATCTACCCTCTTATGGCTGCAAGATCATGACTGGAGTGCTGCTGGTCTaGAAGGGTCCACTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: LEPSASQYLPSYGCKIMTGVLLV*KGPLWL
Trigger: AAGCCAGAGTGGACCCTTCCAGACCAGCAGCACTCC...AGTCATGATCTTGCAGCCATAAGAGGGTAGATATTGAGAAGCAGAAGGCTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp GCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCGATATGGAGTGCTGCTaGTCTGGAAGGGTCCACTCT +
Preference number: 4 (lower is better)
Translates to: ANASCFHVLTWILGQSLSDMECC*SGRVHS
Trigger: AGAGTGGACCCTTCCAGACCAGCAGCACTCCATATC...GGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTGATATGGAGTGCTGCTaGTCTGGAAGGGTCCACTCT +
Preference number: 4 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPDMECC*SGRVHS
Trigger: AGAGTGGACCCTTCCAGACCAGCAGCACTCCATATC...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AAACTAGGTTTAGAGTCATCAAGCTTCTGTCTGTGCCTTCTGGGTTCCCGAGGTGATATGGAGTGCTGCTaGTCTGGAAGGGTCCACTCT +
Preference number: 4 (lower is better)
Translates to: KLGLESSSFCLCLLGSRGDMECC*SGRVHS
Trigger: AGAGTGGACCCTTCCAGACCAGCAGCACTCCATATC...ACCTCGGGAACCCAGAAGGCACAGACAGAAGCTTGATGACTCTAAACCTAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR CCA 90 bp TCCTTAAAGCTGTACACACATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCCGAGGTGGTGGTGCATaGCGGAAGCATTCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: SLKLYTHLLPSEFITDGPRGGGA*RKHSGR
Trigger: CCTTCCAGAATGCTTCCGCCATGCACCACCACCTCG...GGGACCATCTGTGATAAATTCAGAAGGGAGGAGATGTGTGTACAGCTTTAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp ATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTAATGGTGTGGACTTCTCTTGCTGCCATTCGAGGTaGTGGTGCATGGCGGAAGCA +
Preference number: 4 (lower is better)
Translates to: ISSLLNLSQMVPNGVDFSCCHSR*WCMAEA
Trigger: TGCTTCCGCCATGCACCACCACCTCGAATGGCAGCA...AGAGAAGTCCACACCATTAGGGACCATCTGTGATAAATTCAGAAGGGAGGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTGTTGGGGAACTGCTGTaGCTTCCATCAGCGTCAACA +
Preference number: 4 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPVGELL*LPSAST
Trigger: TGTTGACGCTGATGGAAGCCACAGCAGTTCCCCAAC...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGTTTGGTAAGGCTGGTTaGTTAAGAATCTCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLRFGKAG*LRISGA
Trigger: TGCACCAGAGATTCTTAACCAACCAGCCTTACCAAA...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TCCTTAAAGCTGTACACACATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCCTGCCAGTGGGGCCTTaGGTAAGGCAGATTGGGGTT +
Preference number: 4 (lower is better)
Translates to: SLKLYTHLLPSEFITDGPLPVGP*VRQIGV
Trigger: AACCCCAATCTGCCTTACCCAAGGCCCCACTGGCAG...GGGACCATCTGTGATAAATTCAGAAGGGAGGAGATGTGTGTACAGCTTTAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CTGAATGATGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCTGCCAGTGGGGCCTTaGGTAAGGCAGATTGGGGTT +
Preference number: 4 (lower is better)
Translates to: LNDGTVMEASILPHVPLVLPVGP*VRQIGV
Trigger: AACCCCAATCTGCCTTACCCAAGGCCCCACTGGCAG...CACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCATCATTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp ATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTAATGGTGTGGACTTCTCTGTCTGTAGGTCCCCGTaGGCCATATGTCCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: ISSLLNLSQMVPNGVDFSVCRSP*AICPLS
Trigger: GCTGAGAGGACATATGGCCCACGGGGACCTACAGAC...AGAGAAGTCCACACCATTAGGGACCATCTGTGATAAATTCAGAAGGGAGGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTGCCCCTTGCCCTCCTTaGCCCTCCATTGTAAGAAAT +
Preference number: 4 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPAPCPP*PSIVRN
Trigger: ATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGC...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTTGTGACTGCCAGGAGTaGTCAAAGTGCATGCCACAG +
Preference number: 4 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPCDCQE*SKCMPQ
Trigger: CTGTGGCATGCACTTTGACCACTCCTGGCAGTCACA...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CAGATGGTCCCTAATGGTGTGGACTTCTCTGCTCATTTTGAAAGGGCTCTGGCATTCTGCTTGGGTGGGTaGAGGATTCCAATGAAGGGA +
Preference number: 4 (lower is better)
Translates to: QMVPNGVDFSAHFERALAFCLGG*RIPMKG
Trigger: TCCCTTCATTGGAATCCTCCACCCACCCAAGCAGAA...TGCCAGAGCCCTTTCAAAATGAGCAGAGAAGTCCACACCATTAGGGACCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGCAAATAAATGGACAGTaGTGTGCTTCAAGCTACCAC +
Preference number: 4 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLRQINGQ*CASSYH
Trigger: GTGGTAGCTTGAAGCACACCACTGTCCATTTATTTG...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp GAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCAAATCTCTGCTAATTTTGAAAGGGCTCTaGCAAGTGAGAGGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: EKDQRTRGPLGFEGKSLLILKGL*QVRGSE
Trigger: CTCACTGCCTCTCACTTGCCAGAGCCCTTTCAAAAT...TAGCAGAGATTTGCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AAAGGTGGGTTTGAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCTTCCATGTATTAACCTaGATTCTGGGCCAGTCCCTT +
Preference number: 4 (lower is better)
Translates to: KGGFEKDQRTRGPLGFEGFHVLT*ILGQSL
Trigger: AAGGGACTGGCCCAGAATCCAGGTTAATACATGGAA...GCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTCAAACCCACCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CTGAATGATGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCTCTGTTGGTCTCGGTaGCTGGTAGTGACCTGCGGA +
Preference number: 4 (lower is better)
Translates to: LNDGTVMEASILPHVPLVLCWSR*LVVTCG
Trigger: TCCGCAGGTCACTACCAGCCACCGAGACCAACAGAG...CACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCATCATTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371432.7
ENST00000371438.5
ENST00000647337.2
CDS-3UTR CCA 90 bp TGCTATTTGCTTGAGAAACAAAGCCTTCCCTCCTCCCAAGTTGAAAGAAATAAATGGAATGGGGTCCCTTaGGGCACCGCGTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: CYLLEKQSLPSSQVERNKWNGVP*GTASWV
Trigger: CACCCAGGACGCGGTGCCCCAAGGGACCCCATTCCA...TTTATTTCTTTCAACTTGGGAGGAGGGAAGGCTTTGTTTCTCAAGCAAATAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000646519.1
3UTR CAA 72 bp GCCTTGGGTAAGGCAGATTGGGGTTCCCCTGTTGTGTaGTTTGGTAAGGCTGGTTGGTTAAGAATCTCTGGT +
Preference number: 4 (lower is better)
Translates to: ALGKADWGSPVV*FGKAGWLRISG
Trigger: ACCAGAGATTCTTAACCAACCAGCCTTACCAAACAACACAACAGGGGAACCCCAATCTGCCTTACCCAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGCAAATCTCAGATCGTTaGACCTTGCTACTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLRQISDR*TLLLGF
Trigger: AAAACCAAGTAGCAAGGTTCAACGATCTGAGATTTG...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATCAAATCTCAGATCGTTaGACCTTGCTACTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNQISDR*TLLLGF
Trigger: AAAACCAAGTAGCAAGGTTCAACGATCTGAGATTTG...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp GTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAACTGGTTTTGCGCCCTAAATCACTaGGGCGGTCAGAGAACAAAC +
Preference number: 4 (lower is better)
Translates to: VMEASILPHVPLVHLNWFCALNH*GGQRTN
Trigger: GTTTGTTCTCTGACCGCCTCAGTGATTTAGGGCGCA...AAACCAGTTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp AGCCCCTTGCCCTCCTTGGCCCTCCATTGTAAGAAATACAAATGTCAAAGGCTGACTCTCATACTGGGATaGGGAATGCGCCCTAAATCA +
Preference number: 4 (lower is better)
Translates to: SPLPSLALHCKKYKCQRLTLILG*GMRPKS
Trigger: TGATTTAGGGCGCATTCCTCATCCCAGTATGAGAGT...CAGCCTTTGACATTTGTATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp GTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAACTGGTTTACACAGCTGCCACCGTaGGGGTGTGAAGTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: VMEASILPHVPLVHLNWFTQLPP*GCEVSK
Trigger: CTTTGAAACTTCACACCCTCACGGTGGCAGCTGTGT...AAACCAGTTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAAGAGTTATTCTGAATaGTGGTACTGTGATGGAAGC +
Preference number: 4 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLRKSYSE*WYCDGS
Trigger: GCTTCCATCACAGTACCATCATTCAGAATAACTCTT...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CAAAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTTGTGCCTGGATGAACTaGAATTGCTTAGCAATATTT +
Preference number: 4 (lower is better)
Translates to: QRLSVGPRGPYVLSAQLPCAWMN*NCLAIF
Trigger: AAATATTGCTAAGCAATTTCAGTTCATCCAGGCACA...AGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp AAAGGTGGGTTTGAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCTGTGCGGCTTTTAGCTaGCTATGTCTTTGCTATGAA +
Preference number: 4 (lower is better)
Translates to: KGGFEKDQRTRGPLGFEGCAAFS*LCLCYE
Trigger: TTCATAGCAAAGACATAGTCAGCTAAAAGCCGCACA...GCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTCAAACCCACCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGCCTGTTCTGGAACTCTaGTATGGGTTAAAATTTGTG +
Preference number: 4 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLRPVLEL*YGLKFV
Trigger: CACAAATTTTAACCCATATCAGAGTTCCAGAACAGG...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTGCTGAAGAGGCTGTTTaGTGCCATAGTCCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPAEEAV*CHSPSF
Trigger: AAAGGAGGGACTATGGCATCAAACAGCCTCTTCAGC...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371432.7
ENST00000371438.5
ENST00000647337.2
CDS-3UTR GCA 90 bp TGCTATGAAGCCTGGCGATTTAGAGTTTTGCTTAACTATGAAACCACAGAACATTGTTGCTGCTGCTGTTaGGCAGCCACCACCGGGCTC +
Preference number: 4 (lower is better)
Translates to: CYEAWRFRVLLNYETTEHCCCCC*AATTGL
Trigger: GAGCCCGGTGGTGGCTGCGCAACAGCAGCAGCAACA...ATGTTCTGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCAGGCTTCATAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp AATAGGATGCAGCTGGCACTGGCGGTAGCATTTTTATGTCAATTAATTAAAATTGCCGCCGCCTCCTGCTaGTGCTGCTGCTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: NRMQLALAVAFLCQLIKIAAASC*CCCCCC
Trigger: GCAGCAACAGCAGCAGCAGCAGCAGGAGGCGGCGGC...AATTTTAATTAATTGACATAAAAATGCTACCGCCAGTGCCAGCTGCATCCTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp TGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAGAACCACGCGGCGGGGAAGACTGTaGCTGCCTGGGGTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: CIEKTANSSNVCATKRTTRRGRL*LPGVCN
Trigger: ATTACAGACCCCAGGCAGGCACAGTCTTCCCCGCCG...CGTGGTTCTCTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp AAACTAGGTTTAGAGTCATCAAGCTTCTGTCTGTGCCTTCTGGGTTCCCGAGGTGAAATGCTTGGGAACTaGCTGGGGTCTGAAAAAGGG +
Preference number: 4 (lower is better)
Translates to: KLGLESSSFCLCLLGSRGEMLGN*LGSEKG
Trigger: CCCTTTTTCAGACCCCAGGCAGTTCCCAAGCATTTC...ACCTCGGGAACCCAGAAGGCACAGACAGAAGCTTGATGACTCTAAACCTAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR GCA 90 bp TCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCGGAATTGAGTAGAGATATGGAGTaGTGCTGGTCTGGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: SCFHVLTWILGQSLSSELSRDME*CWSGRV
Trigger: GACCCTTCCAGACCAGCAGCACTCCATATCTCTACT...CAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp ACTAGGACCAGAGAGCCCTTTCCTGCTATTTGCTTGAGAAACAAAGCCTTCCCTAGTAGAGATATGGAGTaGTGCTGGTCTGGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: TRTREPFPAICLRNKAFPSRDME*CWSGRV
Trigger: GACCCTTCCAGACCAGCAGCACTCCATATCTCTACT...AGGGAAGGCTTTGTTTCTCAAGCAAATAGCAGGAAAGGGCTCTCTGGTCCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR GCA 90 bp CAGATGGTCCCTAATGGTGTGGACTTCTCTGCTCATTTTGAAAGGGCTCTGGCATTGGATTTAATAGCGTaGTGCCATTCGAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: QMVPNGVDFSAHFERALALDLIA*CHSRWW
Trigger: CCACCACCTCGAATGGCAGCACGCTATTAAATCCAA...TGCCAGAGCCCTTTCAAAATGAGCAGAGAAGTCCACACCATTAGGGACCATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp TGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAACTACCTGCTGGAACCTaGTGCCTTTTCAGAGGACCT +
Preference number: 4 (lower is better)
Translates to: WYCDGSIHSTSCPFSAPQLPAGT*CLFRGP
Trigger: AGGTCCTCTGAAAAGGCAGCAGGTTCCAGCAGGTAG...TTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp GAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCAAATCTCTGCTATTCTGGGTTGCTGCCTaGAGCCACTATAGTAACATT +
Preference number: 4 (lower is better)
Translates to: EKDQRTRGPLGFEGKSLLFWVAA*SHYSNI
Trigger: AATGTTACTATAGTGGCTGCAGGCAGCAACCCAGAA...TAGCAGAGATTTGCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp CAGATGGTCCCTAATGGTGTGGACTTCTCTGCTCATTTTGAAAGGGCTCTGGCATGGGAGTCCATCTGCTaGAGAAAATGTGAGGCACTA +
Preference number: 4 (lower is better)
Translates to: QMVPNGVDFSAHFERALAWESIC*RKCEAL
Trigger: TAGTGCCTCACATTTTCTGCAGCAGATGGACTCCCA...TGCCAGAGCCCTTTCAAAATGAGCAGAGAAGTCCACACCATTAGGGACCATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR GCA 90 bp ACTAGGACCAGAGAGCCCTTTCCTGCTATTTGCTTGAGAAACAAAGCCTTCCCTCCATGGGAGTCCATCTaGTGCAGAAAATGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: TRTREPFPAICLRNKAFPPWESI*CRKCEA
Trigger: TGCCTCACATTTTCTGCAGCAGATGGACTCCCATGG...AGGGAAGGCTTTGTTTCTCAAGCAAATAGCAGGAAAGGGCTCTCTGGTCCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000646519.1
CDS-3UTR CCA 90 bp AAATGTGGCTGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGCACAAGTTAGCGAAGTaGCCGGGGGAGGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: KCGCIEKTANSSNVCATKHKLAK*PGEGEE
Trigger: CTCCTCCCCCTCCCCCGGCCACTTCGCTAACTTGTG...CTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCAGCCACATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359524.7
ENST00000646519.1
CDS-3UTR CCA 90 bp TCCTTAAAGCTGTACACACATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCAACCACAGTCCCATCTaGTACCTCTCCGAGGGCTAC +
Preference number: 4 (lower is better)
Translates to: SLKLYTHLLPSEFITDGPNHSPI*YLSEGY
Trigger: GTAGCCCTCGGAGAGGTACCAGATGGGACTGTGGTT...GGGACCATCTGTGATAAATTCAGAAGGGAGGAGATGTGTGTACAGCTTTAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TGGCTCCTCCGAGGAGAGGAACAAGGTGGTCGAAGACTGGGAGTCCAAGGTACTTTGAACCTTGCTACTTaGTTTTTCATAACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: WLLRGEEQGGRRLGVQGTLNLAT*FFITAE
Trigger: CTCTGCTGTTATGAAAAACCAAGTAGCAAGGTTCAA...AGTACCTTGGACTCCCAGTCTTCGACCACCTTGTTCCTCTCCTCGGAGGAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CCA 90 bp TCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCGGAATTGCACCTACTCTCATACTaGGATGAGGAATGCGCCCTA +
Preference number: 4 (lower is better)
Translates to: SCFHVLTWILGQSLSSELHLLSY*DEECAL
Trigger: TAGGGCGCATTCCTCATCCCAGTATGAGAGTAGGTG...CAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp ACTAGGACCAGAGAGCCCTTTCCTGCTATTTGCTTGAGAAACAAAGCCTTCCCTTCTGAAGCACCTGCCTaGCTCTTCTTACTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: TRTREPFPAICLRNKAFPSEAPA*LFLLRV
Trigger: CACTCTCAGTAAGAAGAGCCAGGCAGGTGCTTCAGA...AGGGAAGGCTTTGTTTCTCAAGCAAATAGCAGGAAAGGGCTCTCTGGTCCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR CCA 90 bp CTGAATGATGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGTGCTTGGGAACTGCCTaGGGTCTGAAAAAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: LNDGTVMEASILPHVPLVCLGTA*GLKKGP
Trigger: TGGGCCCTTTTTCAGACCCCAGGCAGTTCCCAAGCA...CACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCATCATTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAATGGATAGTGCATTCGTaGGTTGGAGAAGCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: WYCDGSIHSTSCPFSAPQWIVHS*VGEAAL
Trigger: GAGAGCCGCTTCTCCAACCCACGAATGCACTATCCA...TTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TCCTTAAAGCTGTACACACATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTGTGGTAGTGAGTGGTaGCGGACATACCGAGGGACA +
Preference number: 4 (lower is better)
Translates to: SLKLYTHLLPSEFITDGPCGSEW*RTYRGT
Trigger: TGTCCCTCGGTATGTCCGCCACCACTCACTACCACA...GGGACCATCTGTGATAAATTCAGAAGGGAGGAGATGTGTGTACAGCTTTAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp ACTTTTGCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCTGCCATTCGAGGTGGTaGTGCATGGCGGAAGCATTC +
Preference number: 4 (lower is better)
Translates to: TFANASCFHVLTWILGQSCHSRW*CMAEAF
Trigger: GAATGCTTCCGCCATGCACCACCACCTCGAATGGCA...GGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGCAAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAAGTTGGGGAACTGCTGTaGCTTCCATCAGCGTCAACA +
Preference number: 4 (lower is better)
Translates to: WYCDGSIHSTSCPFSAPQVGELL*LPSAST
Trigger: TGTTGACGCTGATGGAAGCCACAGCAGTTCCCCAAC...TTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TCCTTAAAGCTGTACACACATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCGCCCCCAGATACCACTaGGCCACTGCTGAGGAATTT +
Preference number: 4 (lower is better)
Translates to: SLKLYTHLLPSEFITDGPAPRYH*ATAEEF
Trigger: AAATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGC...GGGACCATCTGTGATAAATTCAGAAGGGAGGAGATGTGTGTACAGCTTTAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CAGATGGTCCCTAATGGTGTGGACTTCTCTGCTCATTTTGAAAGGGCTCTGGCATTAGTGCACCTCAACTaGTTTTGTGAGCTGTCTGCG +
Preference number: 4 (lower is better)
Translates to: QMVPNGVDFSAHFERALALVHLN*FCELSA
Trigger: CGCAGACAGCTCACAAAACCAGTTGAGGTGCACTAA...TGCCAGAGCCCTTTCAAAATGAGCAGAGAAGTCCACACCATTAGGGACCATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp GCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTTGGGTAAGGCAGATTaGGGTTCCCCTGTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: ANASCFHVLTWILGQSLSLGKAD*GSPVVL
Trigger: CAACACAACAGGGGAACCCCAATCTGCCTTACCCAA...GGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCGGAATTGCTTCTAAAGTGTTTCTaGGTTGCTGCCTGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: SCFHVLTWILGQSLSSELLLKCF*VAACSH
Trigger: GTGGCTGCAGGCAGCAACCCAGAAACACTTTAGAAG...CAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp ACTAGGACCAGAGAGCCCTTTCCTGCTATTTGCTTGAGAAACAAAGCCTTCCCTCTTCTAAAGTGTTTCTaGGTTGCTGCCTGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: TRTREPFPAICLRNKAFPLLKCF*VAACSH
Trigger: GTGGCTGCAGGCAGCAACCCAGAAACACTTTAGAAG...AGGGAAGGCTTTGTTTCTCAAGCAAATAGCAGGAAAGGGCTCTCTGGTCCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR CCA 90 bp TGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGCAGAAGTCAGAGGTGGCGTGAGACAACTGAAATaGATAAAAATGTGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: CLALLTESGRPEAEVRGGVRQLK*IKMWLH
Trigger: ATGCAGCCACATTTTTATCCATTTCAGTTGTCTCAC...GCCACCTCTGACTTCTGCCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR CCA 90 bp AAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTGCTTTACAATATGTGCATaGAAAGCAATTCTTGGGCAA +
Preference number: 4 (lower is better)
Translates to: KAVCRSPWAICPLSSATCFTICA*KAILGQ
Trigger: TTGCCCAAGAATTGCTTTCCATGCACATATTGTAAA...GCAGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp ACTTTTGCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTGAGTTTGCAGCTTaGAATGGGGTCCCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: TFANASCFHVLTWILGQSLEFAA*NGVPWG
Trigger: GCCCCAAGGGACCCCATTCCAAGCTGCAAACTCAAG...GGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGCAAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR CCA 90 bp CTGAATGATGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGAACCCGCAAGCCTGCTaGTGGAGCTTCAGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: LNDGTVMEASILPHVPLVNPQAC*WSFSLS
Trigger: TGACAAGCTGAAGCTCCACCAGCAGGCTTGCGGGTT...CACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCATCATTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646519.1
3UTR CAA 72 bp TTGCCTCGTCCACTCCGGCCCACAAATCTCAGATCGTaGAACCTTGCTACTTGGTTTTTCATAACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: LPRPLRPTNLRS*NLATWFFITAE
Trigger: CTCTGCTGTTATGAAAAACCAAGTAGCAAGGTTCAACGATCTGAGATTTGTGGGCCGGAGTGGACGAGGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR TCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCCGAGGGCTACCACCTTaGAGGCCACGGGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGRGLPP*RPRAGS
Trigger: AGACCCTGCCCGTGGCCTTCAAGGTGGTAGCCCTCG...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CTTGAGCCTTCTGCTTCTCAATATCTACCCTCTTATGGCTGCAAGATCATGACTCGGTTATGGTCAAGGTaGAACTCTTGCCTCGTCCAC +
Preference number: 4 (lower is better)
Translates to: LEPSASQYLPSYGCKIMTRLWSR*NSCLVH
Trigger: GTGGACGAGGCAAGAGTTTCACCTTGACCATAACCG...AGTCATGATCTTGCAGCCATAAGAGGGTAGATATTGAGAAGCAGAAGGCTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCGAGGGCCGTGGGTTCTaGGGCGGGACACCTACTCTC +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGEGRGF*GGTPTL
Trigger: GAGAGTAGGTGTCCCGCCTCAGAACCCACGGCCCTC...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp GCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCCTGGGGTCTGTAATCTaGCTCTGTCCTTGTGGATTA +
Preference number: 4 (lower is better)
Translates to: ANASCFHVLTWILGQSLSLGSVI*LCPCGL
Trigger: TAATCCACAAGGACAGAGTCAGATTACAGACCCCAG...GGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp ATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTAATGGTGTGGACTTCTCTGCTCTCAGTGAGGGATaGAATGCTTGGGAACTGCCT +
Preference number: 4 (lower is better)
Translates to: ISSLLNLSQMVPNGVDFSALSEG*NAWELP
Trigger: AGGCAGTTCCCAAGCATTTCATCCCTCACTGAGAGC...AGAGAAGTCCACACCATTAGGGACCATCTGTGATAAATTCAGAAGGGAGGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp TCCTTAAAGCTGTACACACATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCAGAAGCGGCTCTCAGTaGGGGATGAAATGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: SLKLYTHLLPSEFITDGPRSGSQ*GMKCLG
Trigger: TCCCAAGCATTTCATCCCTCACTGAGAGCCGCTTCT...GGGACCATCTGTGATAAATTCAGAAGGGAGGAGATGTGTGTACAGCTTTAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CTGTGCCTGCCTGGGGTCTGTAATCTGACTCTGTCCTTGTGGATTAAAAGGACTAAACTGATAGGATCCTaGCGAAGTGCCATAGTAGAG +
Preference number: 4 (lower is better)
Translates to: LCLPGVCNLTLSLWIKRTKLIGS*RSAIVE
Trigger: CTCTACTATGGCACTTCGTCAGGATCCTATCAGTTT...AGTCCTTTTAATCCACAAGGACAGAGTCAGATTACAGACCCCAGGCAGGCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR TCA 90 bp CTGAATGATGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGACACAGCTGCCACCGTaGGGGTGTGAAGTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: LNDGTVMEASILPHVPLVTQLPP*GCEVSK
Trigger: CTTTGAAACTTCACACCCTCACGGTGGCAGCTGTGT...CACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCATCATTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTACTCCCAAAGGACAGTaGTGTCATTCTGCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPTPKGQ*CHSAPL
Trigger: TAGAGGAGCAGAATGACATCACTGTCCTTTGGGAGT...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp TGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAAGGGGCCGTTAGGGTTTaGAGGCAAATCTCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: WYCDGSIHSTSCPFSAPQGAVRV*RQISAK
Trigger: TTTAGCAGAGATTTGCCTTCAAACCCTAACGGCCCC...TTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTCTACAAAGGTGGGTTTaGGAAGGACCAGAGAACAAG +
Preference number: 4 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPLQRWV*EGPENK
Trigger: CTTGTTCTCTGGTCCTTCTCAAACCCACCTTTGTAG...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp TGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAAGCAAGTGAGAGGCAGTaGGACCGTCTAAAGAGCAAA +
Preference number: 4 (lower is better)
Translates to: WYCDGSIHSTSCPFSAPQASERQ*DRLKSK
Trigger: TTTGCTCTTTAGACGGTCTCACTGCCTCTCACTTGC...TTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp AATCATGACCTGTGGCACAAAGCGGAATTTTTACAATATGTGCATGGAAAGCAATCACGTCGCTCATTTTaGCGGGCTGCAGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: NHDLWHKAEFLQYVHGKQSRRSF*RAAGCW
Trigger: CCAGCAGCCTGCAGCCCGGCAAAATGAGCGACGTGA...TTGCTTTCCATGCACATATTGTAAAAATTCCGCTTTGTGCCACAGGTCATGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp GCTTATTTATCTAAGCATACTTGGTATACGGCCTTTAGAAGGCAAAGTGTTTTGTGTTGCTGCTGCTGTTaGGCAGCCACCACCGGGCTC +
Preference number: 4 (lower is better)
Translates to: AYLSKHTWYTAFRRQSVLCCCCC*AATTGL
Trigger: GAGCCCGGTGGTGGCTGCGCAACAGCAGCAGCAACA...CAAAACACTTTGCCTTCTAAAGGCCGTATACCAAGTATGCTTAGATAAATAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp AATCATGACCTGTGGCACAAAGCGGAATTTTTACAATATGTGCATGGAAAGCAATGCTGCTGTTGCTGCTaGTGTTGCGCAGCCACCACC +
Preference number: 4 (lower is better)
Translates to: NHDLWHKAEFLQYVHGKQCCCCC*CCAATT
Trigger: GGTGGTGGCTGCGCAACAGCAGCAGCAACAGCAGCA...TTGCTTTCCATGCACATATTGTAAAAATTCCGCTTTGTGCCACAGGTCATGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp TGCTATGAAGCCTGGCGATTTAGAGTTTTGCTTAACTATGAAACCACAGAACATTGCTGCTGCTGTTGCTaGTGCTGTTGCGCAGCCACC +
Preference number: 4 (lower is better)
Translates to: CYEAWRFRVLLNYETTEHCCCCC*CCCAAT
Trigger: GGTGGCTGCGCAACAGCAGCAGCAACAGCAGCAGCA...ATGTTCTGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCAGGCTTCATAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGCAGATCGTTGAACCTTaGTACTTGGTTTTTCATAAC +
Preference number: 4 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLRQIVEP*YLVFHN
Trigger: GTTATGAAAAACCAAGTAGCAAGGTTCAACGATCTG...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp CTTGAGCCTTCTGCTTCTCAATATCTACCCTCTTATGGCTGCAAGATCATGACTTCAAGCTTCTGTCTGTaGCTTCTGGGTTCCCGAGGT +
Preference number: 4 (lower is better)
Translates to: LEPSASQYLPSYGCKIMTSSFCL*LLGSRG
Trigger: ACCTCGGGAACCCAGAAGGCACAGACAGAAGCTTGA...AGTCATGATCTTGCAGCCATAAGAGGGTAGATATTGAGAAGCAGAAGGCTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp TGCTATGAAGCCTGGCGATTTAGAGTTTTGCTTAACTATGAAACCACAGAACATCGGCGGGGAAGACTGTaGCTGCCTGGGGTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: CYEAWRFRVLLNYETTEHRRGRL*LPGVCN
Trigger: ATTACAGACCCCAGGCAGGCACAGTCTTCCCCGCCG...ATGTTCTGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCAGGCTTCATAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp TGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAAGAAATGCTTGGGAACTaGCTGGGGTCTGAAAAAGGG +
Preference number: 4 (lower is better)
Translates to: WYCDGSIHSTSCPFSAPQEMLGN*LGSEKG
Trigger: CCCTTTTTCAGACCCCAGGCAGTTCCCAAGCATTTC...TTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp GTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAACTGGTTTAGTAGAGATATGGAGTaGTGCTGGTCTGGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: VMEASILPHVPLVHLNWFSRDME*CWSGRV
Trigger: GACCCTTCCAGACCAGCAGCACTCCATATCTCTACT...AAACCAGTTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp CTGTGCCTGCCTGGGGTCTGTAATCTGACTCTGTCCTTGTGGATTAAAAGGACTAGGATCCTGACGAAGTaGCATAGTAGAGATATGGAG +
Preference number: 4 (lower is better)
Translates to: LCLPGVCNLTLSLWIKRTRILTK*HSRDME
Trigger: CTCCATATCTCTACTATGGCACTTCGTCAGGATCCT...AGTCCTTTTAATCCACAAGGACAGAGTCAGATTACAGACCCCAGGCAGGCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR GCA 90 bp GAACCTTGCTACTTGGTTTTTCATAACAGCAGAGGCATTCCGGAGCTCAGCAGATTGGATTTAATAGCGTaGTGCCATTCGAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: EPCYLVFHNSRGIPELSRLDLIA*CHSRWW
Trigger: CCACCACCTCGAATGGCAGCACGCTATTAAATCCAA...TCTGCTGAGCTCCGGAATGCCTCTGCTGTTATGAAAAACCAAGTAGCAAGGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR GCA 90 bp ACTAGGACCAGAGAGCCCTTTCCTGCTATTTGCTTGAGAAACAAAGCCTTCCCTTTGGATTTAATAGCGTaGTGCCATTCGAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: TRTREPFPAICLRNKAFPLDLIA*CHSRWW
Trigger: CCACCACCTCGAATGGCAGCACGCTATTAAATCCAA...AGGGAAGGCTTTGTTTCTCAAGCAAATAGCAGGAAAGGGCTCTCTGGTCCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR GCA 90 bp GCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTTGGATTTAATAGCGTaGTGCCATTCGAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: ANASCFHVLTWILGQSLSLDLIA*CHSRWW
Trigger: CCACCACCTCGAATGGCAGCACGCTATTAAATCCAA...GGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp CAGATGGTCCCTAATGGTGTGGACTTCTCTGCTCATTTTGAAAGGGCTCTGGCATCTCTGGTGCAATTTTaGTCTCCTGTACTAGGTGTC +
Preference number: 4 (lower is better)
Translates to: QMVPNGVDFSAHFERALASLVQF*SPVLGV
Trigger: GACACCTAGTACAGGAGAGCAAAATTGCACCAGAGA...TGCCAGAGCCCTTTCAAAATGAGCAGAGAAGTCCACACCATTAGGGACCATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp ACTTTTGCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCCTGCTGGAACCTGCTaGCTTTTCAGAGGACCTACT +
Preference number: 4 (lower is better)
Translates to: TFANASCFHVLTWILGQSPAGTC*LFRGPT
Trigger: AGTAGGTCCTCTGAAAAGGCAGCAGGTTCCAGCAGG...GGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGCAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp CTGAATGATGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCCTGCTGGAACCTGCTaGCTTTTCAGAGGACCTACT +
Preference number: 4 (lower is better)
Translates to: LNDGTVMEASILPHVPLVPAGTC*LFRGPT
Trigger: AGTAGGTCCTCTGAAAAGGCAGCAGGTTCCAGCAGG...CACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCATCATTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp CTGAATGATGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCTCAGCTCAGCTACCTaGTGGAACCTGCTGCCTTTT +
Preference number: 4 (lower is better)
Translates to: LNDGTVMEASILPHVPLVLSSAT*WNLLPF
Trigger: AAAAGGCAGCAGGTTCCAGCAGGTAGCTGAGCTGAG...CACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCATCATTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp AGCCCCTTGCCCTCCTTGGCCCTCCATTGTAAGAAATACAAATGTCAAAGGCTGAAATGGACAGTGGTGTaGTTCAAGCTACCACACACA +
Preference number: 4 (lower is better)
Translates to: SPLPSLALHCKKYKCQRLKWTVV*FKLPHT
Trigger: TGTGTGTGGTAGCTTGAAGCACACCACTGTCCATTT...CAGCCTTTGACATTTGTATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp ACTAGGACCAGAGAGCCCTTTCCTGCTATTTGCTTGAGAAACAAAGCCTTCCCTTGGGAGTCCATCTGCTaGAGAAAATGTGAGGCACTA +
Preference number: 4 (lower is better)
Translates to: TRTREPFPAICLRNKAFPWESIC*RKCEAL
Trigger: TAGTGCCTCACATTTTCTGCAGCAGATGGACTCCCA...AGGGAAGGCTTTGTTTCTCAAGCAAATAGCAGGAAAGGGCTCTCTGGTCCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000646519.1
CDS-3UTR CCA 90 bp ACTTTTGCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCTCTGTCTGTGCCTTCTaGGTTCCCGAGGTCCATCTA +
Preference number: 4 (lower is better)
Translates to: TFANASCFHVLTWILGQSSVCAF*VPEVHL
Trigger: TAGATGGACCTCGGGAACCCAGAAGGCACAGACAGA...GGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGCAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCGTTCAGGGAGGGCCGTaGGTTCTGAGGCGGGACACC +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGVQGGP*VLRRDT
Trigger: GGTGTCCCGCCTCAGAACCCACGGCCCTCCCTGAAC...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TACTGTAACTTTAATTGCTCTGTGATAGGTAGCTACTTGGGGAGGATTTGTGAAAGCGGGGTGGTAGAGTaGATGGACGGGGACGTCATC +
Preference number: 4 (lower is better)
Translates to: YCNFNCSVIGSYLGRICESGVVE*MDGDVI
Trigger: GATGACGTCCCCGTCCATCCACTCTACCACCCCGCT...TTCACAAATCCTCCCCAAGTAGCTACCTATCACAGAGCAATTAAAGTTACAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR CCA 90 bp TCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCGGAATTGGGCAGAAGTCAGAGGTaGCAGTGTCATCATCTGAAA +
Preference number: 4 (lower is better)
Translates to: SCFHVLTWILGQSLSSELGRSQR*QCHHLK
Trigger: TTTCAGATGATGACACTGCCACCTCTGACTTCTGCC...CAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359524.7
ENST00000371438.5
ENST00000647337.2
CDS-3UTR CCA 90 bp TGCTATGAAGCCTGGCGATTTAGAGTTTTGCTTAACTATGAAACCACAGAACATTGGAAGGGTCCACTCTaGCTTTGGGAAGAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: CYEAWRFRVLLNYETTEHWKGPL*LWEEPG
Trigger: CCCCGGCTCTTCCCAAAGCCAGAGTGGACCCTTCCA...ATGTTCTGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCAGGCTTCATAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CTGAATGATGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGGTTGGGGAACTGCTGTaGCTTCCATCAGCGTCAACA +
Preference number: 4 (lower is better)
Translates to: LNDGTVMEASILPHVPLVVGELL*LPSAST
Trigger: TGTTGACGCTGATGGAAGCCACAGCAGTTCCCCAAC...CACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCATCATTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TTGCTTGAGAAACAAAGCCTTCCCTCCTCCCAAGTTGAAAGAAATAAAGGAGTCGCCCCCAGATACCACTaGGCCACTGCTGAGGAATTT +
Preference number: 4 (lower is better)
Translates to: LLEKQSLPSSQVERNKGVAPRYH*ATAEEF
Trigger: AAATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGC...GACTCCTTTATTTCTTTCAACTTGGGAGGAGGGAAGGCTTTGTTTCTCAAGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR CCA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATTTATCTAAGCATACTTaGTATACGGCCTTTAGAAGG +
Preference number: 4 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNLSKHT*YTAFRR
Trigger: CCTTCTAAAGGCCGTATACCAAGTATGCTTAGATAA...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TCTGAAGCACCTGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGCAGAAGACACTTACAAATAAATaGACAGTGGTGTGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: SEAPAWLFLLRVEGQRQKTLTNK*TVVCFK
Trigger: CTTGAAGCACACCACTGTCCATTTATTTGTAAGTGT...CTTCTGCCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCAGGTGCTTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR CCA 90 bp CTGAATGATGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGGTGAATTACCCCCATTaGGGTGGTTGGAGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: LNDGTVMEASILPHVPLVVNYPH*GGWSEG
Trigger: ACCCTCACTCCAACCACCCCAATGGGGGTAATTCAC...CACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCATCATTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp ATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTAATGGTGTGGACTTCTCTGTGAATTACCCCCATTaGGGTGGTTGGAGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: ISSLLNLSQMVPNGVDFSVNYPH*GGWSEG
Trigger: ACCCTCACTCCAACCACCCCAATGGGGGTAATTCAC...AGAGAAGTCCACACCATTAGGGACCATCTGTGATAAATTCAGAAGGGAGGAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CTTGAGCCTTCTGCTTCTCAATATCTACCCTCTTATGGCTGCAAGATCATGACTGTGAATTACCCCCATTaGGGTGGTTGGAGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: LEPSASQYLPSYGCKIMTVNYPH*GGWSEG
Trigger: ACCCTCACTCCAACCACCCCAATGGGGGTAATTCAC...AGTCATGATCTTGCAGCCATAAGAGGGTAGATATTGAGAAGCAGAAGGCTCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATGTGAGACAACTGAAATaGATAAAAATGTGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNVRQLK*IKMWLH
Trigger: ATGCAGCCACATTTTTATCCATTTCAGTTGTCTCAC...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp GAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCAAATCTCTGCTACTAAAACCAAAGCTGTaGTACCTGTTCTGGAACTCT +
Preference number: 4 (lower is better)
Translates to: EKDQRTRGPLGFEGKSLLLKPKL*YLFWNS
Trigger: AGAGTTCCAGAACAGGTACCACAGCTTTGGTTTTAG...TAGCAGAGATTTGCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CAGATGGTCCCTAATGGTGTGGACTTCTCTGCTCATTTTGAAAGGGCTCTGGCATGGTCCCTAATGGTGTaGACTTCTCTGCTCATTTTG +
Preference number: 4 (lower is better)
Translates to: QMVPNGVDFSAHFERALAWSLMV*TSLLIL
Trigger: CAAAATGAGCAGAGAAGTCCACACCATTAGGGACCA...TGCCAGAGCCCTTTCAAAATGAGCAGAGAAGTCCACACCATTAGGGACCATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CCCAGTTCTGAAGCACCTGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGTTTACAATATGTGCATaGAAAGCAATTCTTGGGCAA +
Preference number: 4 (lower is better)
Translates to: PSSEAPAWLFLLRVEGQRFTICA*KAILGQ
Trigger: TTGCCCAAGAATTGCTTTCCATGCACATATTGTAAA...CCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCAGGTGCTTCAGAACTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR TCA 90 bp GAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCAAATCTCTGCTACAAATCTCAGATCGTTaGACCTTGCTACTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: EKDQRTRGPLGFEGKSLLQISDR*TLLLGF
Trigger: AAAACCAAGTAGCAAGGTTCAACGATCTGAGATTTG...TAGCAGAGATTTGCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp AAATGTGGCTGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGCCTGGCTCTTCTTACTaGGAGTGGAAGGCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: KCGCIEKTANSSNVCATKPGSSY*EWKARG
Trigger: GCCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGG...CTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCAGCCACATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359524.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCACCGAGGGACATGCCTaGGGTGACTGGCGGGGTGTA +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGTEGHA*GDWRGV
Trigger: TACACCCCGCCAGTCACCTCAGGCATGTCCCTCGGT...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp AAAGGTGGGTTTGAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCTATATATGTATATATTaGTACGTGTGGGATGTGGCC +
Preference number: 4 (lower is better)
Translates to: KGGFEKDQRTRGPLGFEGYICIY*YVWDVA
Trigger: GGCCACATCCCACACGTATCAATATATACATATATA...GCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTCAAACCCACCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp AATCATGACCTGTGGCACAAAGCGGAATTTTTACAATATGTGCATGGAAAGCAATGCTCTTCTCCCTCCTaGACCTGGAGTCCACCTCTC +
Preference number: 4 (lower is better)
Translates to: NHDLWHKAEFLQYVHGKQCSSPS*TWSPPL
Trigger: GAGAGGTGGACTCCAGGTTCAGGAGGGAGAAGAGCA...TTGCTTTCCATGCACATATTGTAAAAATTCCGCTTTGTGCCACAGGTCATGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp GTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAACTGGTTTGACCTGCAGCATGTCTaGAAGCAGAAATTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: VMEASILPHVPLVHLNWFDLQHV*KQKLEE
Trigger: CTCTTCCAATTTCTGCTTTCAGACATGCTGCAGGTC...AAACCAGTTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp ACTTTTGCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCTGGAAATCTGCCATGTaGCTGCCAGGAGTGGTCAAA +
Preference number: 4 (lower is better)
Translates to: TFANASCFHVLTWILGQSWKSAM*LPGVVK
Trigger: TTTGACCACTCCTGGCAGTCACATGGCAGATTTCCA...GGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGCAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CTTGAGCCTTCTGCTTCTCAATATCTACCCTCTTATGGCTGCAAGATCATGACTGGGGCCGTTAGGGTTTaGAGGCAAATCTCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: LEPSASQYLPSYGCKIMTGAVRV*RQISAK
Trigger: TTTAGCAGAGATTTGCCTTCAAACCCTAACGGCCCC...AGTCATGATCTTGCAGCCATAAGAGGGTAGATATTGAGAAGCAGAAGGCTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp ATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTAATGGTGTGGACTTCTCTGCAAGTGAGAGGCAGTaGGACCGTCTAAAGAGCAAA +
Preference number: 4 (lower is better)
Translates to: ISSLLNLSQMVPNGVDFSASERQ*DRLKSK
Trigger: TTTGCTCTTTAGACGGTCTCACTGCCTCTCACTTGC...AGAGAAGTCCACACCATTAGGGACCATCTGTGATAAATTCAGAAGGGAGGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp AAATGTGGCTGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAAGGGCTCTGGCAAGTaGGAGGCAGTGAGACCGTCT +
Preference number: 4 (lower is better)
Translates to: KCGCIEKTANSSNVCATKKGSGK*EAVRPS
Trigger: AGACGGTCTCACTGCCTCTCACTTGCCAGAGCCCTT...CTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCAGCCACATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp TCCTTAAAGCTGTACACACATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCACTCATCCACAATCATaGCCTGTGGCACAAAGCGGA +
Preference number: 4 (lower is better)
Translates to: SLKLYTHLLPSEFITDGPTHPQS*PVAQSG
Trigger: TCCGCTTTGTGCCACAGGTCATGATTGTGGATGAGT...GGGACCATCTGTGATAAATTCAGAAGGGAGGAGATGTGTGTACAGCTTTAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CTTGAGCCTTCTGCTTCTCAATATCTACCCTCTTATGGCTGCAAGATCATGACTATGGTGTCACTGTGCTaGAGAGGCTGTTTGATGCCA +
Preference number: 4 (lower is better)
Translates to: LEPSASQYLPSYGCKIMTMVSLC*RGCLMP
Trigger: TGGCATCAAACAGCCTCTTCAGCACAGTGACACCAT...AGTCATGATCTTGCAGCCATAAGAGGGTAGATATTGAGAAGCAGAAGGCTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371432.7
ENST00000371438.5
ENST00000647337.2
CDS-3UTR TCA 90 bp ATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTAATGGTGTGGACTTCTCTATGGTGTCACTGTGCTaGAGAGGCTGTTTGATGCCA +
Preference number: 4 (lower is better)
Translates to: ISSLLNLSQMVPNGVDFSMVSLC*RGCLMP
Trigger: TGGCATCAAACAGCCTCTTCAGCACAGTGACACCAT...AGAGAAGTCCACACCATTAGGGACCATCTGTGATAAATTCAGAAGGGAGGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371432.7
ENST00000371438.5
ENST00000647337.2
CDS-3UTR TCA 90 bp GCTTATTTATCTAAGCATACTTGGTATACGGCCTTTAGAAGGCAAAGTGTTTTGGTTGGAGTCCGGTGGTaGAGCGGTGTGGGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: AYLSKHTWYTAFRRQSVLVGVRW*SGVGSA
Trigger: TGCTGAACCCACACCGCTTCACCACCGGACTCCAAC...CAAAACACTTTGCCTTCTAAAGGCCGTATACCAAGTATGCTTAGATAAATAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR GCA 90 bp AAATTAGAAAACCACATCACTCCAGCATTTCATGCTGATAAAGGGCTAAAGGTTTGCTGCTGCTGTTGCTaGTGCTGTTGCGCAGCCACC +
Preference number: 4 (lower is better)
Translates to: KLENHITPAFHADKGLKVCCCCC*CCCAAT
Trigger: GGTGGCTGCGCAACAGCAGCAGCAACAGCAGCAGCA...AACCTTTAGCCCTTTATCAGCATGAAATGCTGGAGTGATGTGGTTTTCTAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp CTTTGCTTTGGTCTTGAAATCACAAATCAAACACATGACCCAGTGCAAATTAAGTGCTGCTGCTGTTGCTaGTGCTGTTGCGCAGCCACC +
Preference number: 4 (lower is better)
Translates to: LCFGLEITNQTHDPVQIKCCCCC*CCCAAT
Trigger: GGTGGCTGCGCAACAGCAGCAGCAACAGCAGCAGCA...CTTAATTTGCACTGGGTCATGTGTTTGATTTGTGATTTCAAGACCAAAGCAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp CTGTCCTTGTGGATTAAAAGGACTTGGTGCAGAGTTCAGGGAGGGCCGTGGGTTCAGATCGTTGAACCTTaGTACTTGGTTTTTCATAAC +
Preference number: 4 (lower is better)
Translates to: LSLWIKRTWCRVQGGPWVQIVEP*YLVFHN
Trigger: GTTATGAAAAACCAAGTAGCAAGGTTCAACGATCTG...AACCCACGGCCCTCCCTGAACTCTGCACCAAGTCCTTTTAATCCACAAGGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR GCA 90 bp TCCTTAAAGCTGTACACACATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCATTAAAAGGACTTGGTaGAGAGTTCAGGGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: SLKLYTHLLPSEFITDGPIKRTW*RVQGGP
Trigger: CGGCCCTCCCTGAACTCTGCACCAAGTCCTTTTAAT...GGGACCATCTGTGATAAATTCAGAAGGGAGGAGATGTGTGTACAGCTTTAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp ATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTAATGGTGTGGACTTCTCTATTAAAAGGACTTGGTaGAGAGTTCAGGGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: ISSLLNLSQMVPNGVDFSIKRTW*RVQGGP
Trigger: CGGCCCTCCCTGAACTCTGCACCAAGTCCTTTTAAT...AGAGAAGTCCACACCATTAGGGACCATCTGTGATAAATTCAGAAGGGAGGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp GCTTATTTATCTAAGCATACTTGGTATACGGCCTTTAGAAGGCAAAGTGTTTTGCGGCGGGGAAGACTGTaGCTGCCTGGGGTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: AYLSKHTWYTAFRRQSVLRRGRL*LPGVCN
Trigger: ATTACAGACCCCAGGCAGGCACAGTCTTCCCCGCCG...CAAAACACTTTGCCTTCTAAAGGCCGTATACCAAGTATGCTTAGATAAATAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp AAATTAGAAAACCACATCACTCCAGCATTTCATGCTGATAAAGGGCTAAAGGTTCGGCGGGGAAGACTGTaGCTGCCTGGGGTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: KLENHITPAFHADKGLKVRRGRL*LPGVCN
Trigger: ATTACAGACCCCAGGCAGGCACAGTCTTCCCCGCCG...AACCTTTAGCCCTTTATCAGCATGAAATGCTGGAGTGATGTGGTTTTCTAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTAGGATCCTGACGAAGTaGCATAGTAGAGATATGGAG +
Preference number: 4 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPRILTK*HSRDME
Trigger: CTCCATATCTCTACTATGGCACTTCGTCAGGATCCT...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp TCCTTAAAGCTGTACACACATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCGATTTAATAGCGTGCTaGCATTCGAGGTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: SLKLYTHLLPSEFITDGPDLIAC*HSRWWC
Trigger: GCACCACCACCTCGAATGGCAGCACGCTATTAAATC...GGGACCATCTGTGATAAATTCAGAAGGGAGGAGATGTGTGTACAGCTTTAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp CTGAATGATGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGGATTTAATAGCGTGCTaGCATTCGAGGTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: LNDGTVMEASILPHVPLVDLIAC*HSRWWC
Trigger: GCACCACCACCTCGAATGGCAGCACGCTATTAAATC...CACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCATCATTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp ATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTAATGGTGTGGACTTCTCTGATTTAATAGCGTGCTaGCATTCGAGGTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: ISSLLNLSQMVPNGVDFSDLIAC*HSRWWC
Trigger: GCACCACCACCTCGAATGGCAGCACGCTATTAAATC...AGAGAAGTCCACACCATTAGGGACCATCTGTGATAAATTCAGAAGGGAGGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp TCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCGGAATTGATCTCTGCTAAATTCTaGTTGGGTGGGTGGAGGATT +
Preference number: 4 (lower is better)
Translates to: SCFHVLTWILGQSLSSELISAKF*LGGWRI
Trigger: AATCCTCCACCCACCCAAGCAGAATTTAGCAGAGAT...CAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTTTCTGGGTTGCTGCCTaGAGCCACTATAGTAACATT +
Preference number: 4 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPFWVAA*SHYSNI
Trigger: AATGTTACTATAGTGGCTGCAGGCAGCAACCCAGAA...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATGTAGTAGTAAGACTTTaGTTTGGTCTTGAAATCACA +
Preference number: 4 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNVVVRL*FGLEIT
Trigger: TGTGATTTCAAGACCAAAGCAAAGTCTTACTACTAC...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp AGCCCCTTGCCCTCCTTGGCCCTCCATTGTAAGAAATACAAATGTCAAAGGCTGTTCCAGCAATGTTTGTaGTACAAAGAGAACCACGCT +
Preference number: 4 (lower is better)
Translates to: SPLPSLALHCKKYKCQRLFQQCL*YKENHA
Trigger: AGCGTGGTTCTCTTTGTAGCACAAACATTGCTGGAA...CAGCCTTTGACATTTGTATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp CTGAATGATGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCTCCTGGAGAAAGTTTaGACCGCACTTGTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: LNDGTVMEASILPHVPLVLLEKV*TALVVL
Trigger: CAGAACCACAAGTGCGGTGCAAACTTTCTCCAGGAG...CACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCATCATTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371432.7
ENST00000647337.2
CDS-3UTR CCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCACGAGTTCGGCCGGGTaGTCGGCGATGATCTCCACC +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGTSSAG*SAMIST
Trigger: GGTGGAGATCATCGCCGACCACCCGGCCGAACTCGT...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AAAGGTGGGTTTGAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCTTGAACCTTGCTACTTaGTTTTTCATAACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: KGGFEKDQRTRGPLGFEGLNLAT*FFITAE
Trigger: CTCTGCTGTTATGAAAAACCAAGTAGCAAGGTTCAA...GCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTCAAACCCACCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CTTGAGCCTTCTGCTTCTCAATATCTACCCTCTTATGGCTGCAAGATCATGACTCACCTACTCTCATACTaGGATGAGGAATGCGCCCTA +
Preference number: 4 (lower is better)
Translates to: LEPSASQYLPSYGCKIMTHLLSY*DEECAL
Trigger: TAGGGCGCATTCCTCATCCCAGTATGAGAGTAGGTG...AGTCATGATCTTGCAGCCATAAGAGGGTAGATATTGAGAAGCAGAAGGCTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp ACTAGGACCAGAGAGCCCTTTCCTGCTATTTGCTTGAGAAACAAAGCCTTCCCTCTGACTCTGTCCTTGTaGATTAAAAGGACTTGGTGC +
Preference number: 4 (lower is better)
Translates to: TRTREPFPAICLRNKAFPLTLSL*IKRTWC
Trigger: GCACCAAGTCCTTTTAATCCACAAGGACAGAGTCAG...AGGGAAGGCTTTGTTTCTCAAGCAAATAGCAGGAAAGGGCTCTCTGGTCCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR CCA 90 bp GCTTATTTATCTAAGCATACTTGGTATACGGCCTTTAGAAGGCAAAGTGTTTTGAGCGGGGTGGTAGAGTaGATGGACGGGGACGTCATC +
Preference number: 4 (lower is better)
Translates to: AYLSKHTWYTAFRRQSVLSGVVE*MDGDVI
Trigger: GATGACGTCCCCGTCCATCCACTCTACCACCCCGCT...CAAAACACTTTGCCTTCTAAAGGCCGTATACCAAGTATGCTTAGATAAATAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAAGGCAGAAGTCAGAGGTaGCAGTGTCATCATCTGAAA +
Preference number: 4 (lower is better)
Translates to: WYCDGSIHSTSCPFSAPQGRSQR*QCHHLK
Trigger: TTTCAGATGATGACACTGCCACCTCTGACTTCTGCC...TTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359524.7
ENST00000371438.5
ENST00000647337.2
CDS-3UTR CCA 90 bp TGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAGAACCACGTGCTTGGGAACTGCCTaGGGTCTGAAAAAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: CIEKTANSSNVCATKRTTCLGTA*GLKKGP
Trigger: TGGGCCCTTTTTCAGACCCCAGGCAGTTCCCAAGCA...CGTGGTTCTCTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TGCTATGAAGCCTGGCGATTTAGAGTTTTGCTTAACTATGAAACCACAGAACATAGGTGTGGTAGTGAGTaGTGGCGGACATACCGAGGG +
Preference number: 4 (lower is better)
Translates to: CYEAWRFRVLLNYETTEHRCGSE*WRTYRG
Trigger: CCCTCGGTATGTCCGCCACCACTCACTACCACACCT...ATGTTCTGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCAGGCTTCATAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AAATGTGGCTGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAGGTGTGGTAGTGAGTaGTGGCGGACATACCGAGGG +
Preference number: 4 (lower is better)
Translates to: KCGCIEKTANSSNVCATKRCGSE*WRTYRG
Trigger: CCCTCGGTATGTCCGCCACCACTCACTACCACACCT...CTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCAGCCACATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAAGCCATAGTAGAGATATaGAGTGCTGCTGGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: WYCDGSIHSTSCPFSAPQAIVEI*SAAGLE
Trigger: TTCCAGACCAGCAGCACTCCATATCTCTACTATGGC...TTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TACTGTAACTTTAATTGCTCTGTGATAGGTAGCTACTTGGGGAGGATTTGTGAAATGGCGGAAGCATTCTaGAAGGAGACCGGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: YCNFNCSVIGSYLGRICEMAEAF*KETGLP
Trigger: GGGGAGACCGGTCTCCTTCCAGAATGCTTCCGCCAT...TTCACAAATCCTCCCCAAGTAGCTACCTATCACAGAGCAATTAAAGTTACAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR CCA 90 bp TGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAGAACCACGTGCCATTCGAGGTGGTaGTGCATGGCGGAAGCATTC +
Preference number: 4 (lower is better)
Translates to: CIEKTANSSNVCATKRTTCHSRW*CMAEAF
Trigger: GAATGCTTCCGCCATGCACCACCACCTCGAATGGCA...CGTGGTTCTCTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AAATGTGGCTGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGTGCTGCCATTCGAGGTaGTGGTGCATGGCGGAAGCA +
Preference number: 4 (lower is better)
Translates to: KCGCIEKTANSSNVCATKCCHSR*WCMAEA
Trigger: TGCTTCCGCCATGCACCACCACCTCGAATGGCAGCA...CTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCAGCCACATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AAATTAGAAAACCACATCACTCCAGCATTTCATGCTGATAAAGGGCTAAAGGTTGTCTGCGGAGGGCACTaGTCCATACACAGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: KLENHITPAFHADKGLKVVCGGH*SIHSCH
Trigger: GTGGCAGCTGTGTATGGACCAGTGCCCTCCGCAGAC...AACCTTTAGCCCTTTATCAGCATGAAATGCTGGAGTGATGTGGTTTTCTAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CTGAATGATGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGTTGGGTAAGGCAGATTaGGGTTCCCCTGTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: LNDGTVMEASILPHVPLVLGKAD*GSPVVL
Trigger: CAACACAACAGGGGAACCCCAATCTGCCTTACCCAA...CACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCATCATTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TGCTATGAAGCCTGGCGATTTAGAGTTTTGCTTAACTATGAAACCACAGAACATCTGCCAGTGGGGCCTTaGGTAAGGCAGATTGGGGTT +
Preference number: 4 (lower is better)
Translates to: CYEAWRFRVLLNYETTEHLPVGP*VRQIGV
Trigger: AACCCCAATCTGCCTTACCCAAGGCCCCACTGGCAG...ATGTTCTGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCAGGCTTCATAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AATCATGACCTGTGGCACAAAGCGGAATTTTTACAATATGTGCATGGAAAGCAAGTCTGTAGGTCCCCGTaGGCCATATGTCCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: NHDLWHKAEFLQYVHGKQVCRSP*AICPLS
Trigger: GCTGAGAGGACATATGGCCCACGGGGACCTACAGAC...TTGCTTTCCATGCACATATTGTAAAAATTCCGCTTTGTGCCACAGGTCATGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CTGAATGATGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGTTCTGCTTGGGTGGGTaGAGGATTCCAATGAAGGGA +
Preference number: 4 (lower is better)
Translates to: LNDGTVMEASILPHVPLVFCLGG*RIPMKG
Trigger: TCCCTTCATTGGAATCCTCCACCCACCCAAGCAGAA...CACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCATCATTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AAAGGTGGGTTTGAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCTTATCTAAGCATACTTaGTATACGGCCTTTAGAAGG +
Preference number: 4 (lower is better)
Translates to: KGGFEKDQRTRGPLGFEGLSKHT*YTAFRR
Trigger: CCTTCTAAAGGCCGTATACCAAGTATGCTTAGATAA...GCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTCAAACCCACCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CTGAATGATGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCTTCTAAAGTGTTTCTaGGTTGCTGCCTGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LNDGTVMEASILPHVPLVLLKCF*VAACSH
Trigger: GTGGCTGCAGGCAGCAACCCAGAAACACTTTAGAAG...CACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCATCATTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AAAGGTGGGTTTGAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCGTGAGACAACTGAAATaGATAAAAATGTGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: KGGFEKDQRTRGPLGFEGVRQLK*IKMWLH
Trigger: ATGCAGCCACATTTTTATCCATTTCAGTTGTCTCAC...GCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTCAAACCCACCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp GAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCAAATCTCTGCTACACAATCATGACCTGTaGCACAAAGCGGAATTTTTA +
Preference number: 4 (lower is better)
Translates to: EKDQRTRGPLGFEGKSLLHNHDL*HKAEFL
Trigger: TAAAAATTCCGCTTTGTGCCACAGGTCATGATTGTG...TAGCAGAGATTTGCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CTTGAGCCTTCTGCTTCTCAATATCTACCCTCTTATGGCTGCAAGATCATGACTTTCTTGCTGTCCTCCTaGAGAAAGTTTGCACCGCAC +
Preference number: 4 (lower is better)
Translates to: LEPSASQYLPSYGCKIMTFLLSS*RKFAPH
Trigger: GTGCGGTGCAAACTTTCTCCAGGAGGACAGCAAGAA...AGTCATGATCTTGCAGCCATAAGAGGGTAGATATTGAGAAGCAGAAGGCTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371432.7
ENST00000647337.2
CDS-3UTR CCA 90 bp AAATTAGAAAACCACATCACTCCAGCATTTCATGCTGATAAAGGGCTAAAGGTTGTTTGCAGCTTGGAATaGGGTCCCTTGGGGCACCGC +
Preference number: 4 (lower is better)
Translates to: KLENHITPAFHADKGLKVVCSLE*GPLGHR
Trigger: GCGGTGCCCCAAGGGACCCCATTCCAAGCTGCAAAC...AACCTTTAGCCCTTTATCAGCATGAAATGCTGGAGTGATGTGGTTTTCTAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646519.1
3UTR CAA 72 bp TCATACACACTAGTAGACACCAAACTCCACAGCCCCTaGCCCTCCTTGGCCCTCCATTGTAAGAAATACAAA +
Preference number: 4 (lower is better)
Translates to: SYTLVDTKLHSP*PSLALHCKKYK
Trigger: TTTGTATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCTGTGGAGTTTGGTGTCTACTAGTGTGTATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CTTGAGCCTTCTGCTTCTCAATATCTACCCTCTTATGGCTGCAAGATCATGACTACTCTCATACTGGGATaGGGAATGCGCCCTAAATCA +
Preference number: 4 (lower is better)
Translates to: LEPSASQYLPSYGCKIMTTLILG*GMRPKS
Trigger: TGATTTAGGGCGCATTCCTCATCCCAGTATGAGAGT...AGTCATGATCTTGCAGCCATAAGAGGGTAGATATTGAGAAGCAGAAGGCTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp GCTTATTTATCTAAGCATACTTGGTATACGGCCTTTAGAAGGCAAAGTGTTTTGCCTGGCTCTTCTTACTaGGAGTGGAAGGCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: AYLSKHTWYTAFRRQSVLPGSSY*EWKARG
Trigger: GCCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGG...CAAAACACTTTGCCTTCTAAAGGCCGTATACCAAGTATGCTTAGATAAATAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359524.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp AAATTAGAAAACCACATCACTCCAGCATTTCATGCTGATAAAGGGCTAAAGGTTCCTCAACTGGTTTTGTaGGCTGTCTGCGGAGGGCAC +
Preference number: 4 (lower is better)
Translates to: KLENHITPAFHADKGLKVPQLVL*AVCGGH
Trigger: GTGCCCTCCGCAGACAGCTCACAAAACCAGTTGAGG...AACCTTTAGCCCTTTATCAGCATGAAATGCTGGAGTGATGTGGTTTTCTAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp GCTTATTTATCTAAGCATACTTGGTATACGGCCTTTAGAAGGCAAAGTGTTTTGCCTCAACTGGTTTTGTaGGCTGTCTGCGGAGGGCAC +
Preference number: 4 (lower is better)
Translates to: AYLSKHTWYTAFRRQSVLPQLVL*AVCGGH
Trigger: GTGCCCTCCGCAGACAGCTCACAAAACCAGTTGAGG...CAAAACACTTTGCCTTCTAAAGGCCGTATACCAAGTATGCTTAGATAAATAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CAGATGGTCCCTAATGGTGTGGACTTCTCTGCTCATTTTGAAAGGGCTCTGGCAAAGAGTTATTCTGAATaGTGGTACTGTGATGGAAGC +
Preference number: 4 (lower is better)
Translates to: QMVPNGVDFSAHFERALAKSYSE*WYCDGS
Trigger: GCTTCCATCACAGTACCATCATTCAGAATAACTCTT...TGCCAGAGCCCTTTCAAAATGAGCAGAGAAGTCCACACCATTAGGGACCATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp ACTTTTGCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCACTCCCAAAGGACAGTaGTGTCATTCTGCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: TFANASCFHVLTWILGQSTPKGQ*CHSAPL
Trigger: TAGAGGAGCAGAATGACATCACTGTCCTTTGGGAGT...GGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGCAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTGGTGGTGTCATTAGATaGTCCTTGTTTGGATTAAGG +
Preference number: 4 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPGGVIR*SLFGLR
Trigger: CCTTAATCCAAACAAGGATCATCTAATGACACCACC...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CTTGAGCCTTCTGCTTCTCAATATCTACCCTCTTATGGCTGCAAGATCATGACTCTACAAAGGTGGGTTTaGGAAGGACCAGAGAACAAG +
Preference number: 4 (lower is better)
Translates to: LEPSASQYLPSYGCKIMTLQRWV*EGPENK
Trigger: CTTGTTCTCTGGTCCTTCTCAAACCCACCTTTGTAG...AGTCATGATCTTGCAGCCATAAGAGGGTAGATATTGAGAAGCAGAAGGCTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CAGATGGTCCCTAATGGTGTGGACTTCTCTGCTCATTTTGAAAGGGCTCTGGCACCTGTTCTGGAACTCTaGTATGGGTTAAAATTTGTG +
Preference number: 4 (lower is better)
Translates to: QMVPNGVDFSAHFERALAPVLEL*YGLKFV
Trigger: CACAAATTTTAACCCATATCAGAGTTCCAGAACAGG...TGCCAGAGCCCTTTCAAAATGAGCAGAGAAGTCCACACCATTAGGGACCATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp AGCCCCTTGCCCTCCTTGGCCCTCCATTGTAAGAAATACAAATGTCAAAGGCTGCTTGCAGCCTTAAACTaGAAATACAAACCATACCCA +
Preference number: 4 (lower is better)
Translates to: SPLPSLALHCKKYKCQRLLAALN*KYKPYP
Trigger: TGGGTATGGTTTGTATTTTCAGTTTAAGGCTGCAAG...CAGCCTTTGACATTTGTATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371438.5
CDS-3UTR TCA 90 bp AAACTAGGTTTAGAGTCATCAAGCTTCTGTCTGTGCCTTCTGGGTTCCCGAGGTGAATCATGTGGTTTGTaGCCTCACAGTACTCTTAAG +
Preference number: 4 (lower is better)
Translates to: KLGLESSSFCLCLLGSRGESCGL*PHSTLK
Trigger: CTTAAGAGTACTGTGAGGTCACAAACCACATGATTC...ACCTCGGGAACCCAGAAGGCACAGACAGAAGCTTGATGACTCTAAACCTAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR GCA 90 bp AATAGGATGCAGCTGGCACTGGCGGTAGCATTTTTATGTCAATTAATTAAAATTTCACGTCGCTCATTTTaGCGGGCTGCAGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: NRMQLALAVAFLCQLIKISRRSF*RAAGCW
Trigger: CCAGCAGCCTGCAGCCCGGCAAAATGAGCGACGTGA...AATTTTAATTAATTGACATAAAAATGCTACCGCCAGTGCCAGCTGCATCCTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCTGCTGCTGTTGCTGCTaGTGTTGCGCAGCCACCACC +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGCCCCC*CCAATT
Trigger: GGTGGTGGCTGCGCAACAGCAGCAGCAACAGCAGCA...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp TGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAGAACCACGAGAGATATGGAGTGCTaGTGGTCTGGAAGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: CIEKTANSSNVCATKRTTRDMEC*WSGRVH
Trigger: GTGGACCCTTCCAGACCAGCAGCACTCCATATCTCT...CGTGGTTCTCTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp TGCTATGAAGCCTGGCGATTTAGAGTTTTGCTTAACTATGAAACCACAGAACATTGGTCCATACACAGCTaGCACCGTGAGGGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: CYEAWRFRVLLNYETTEHWSIHS*HREGVK
Trigger: CTTCACACCCTCACGGTGGCAGCTGTGTATGGACCA...ATGTTCTGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCAGGCTTCATAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp CAGATGGTCCCTAATGGTGTGGACTTCTCTGCTCATTTTGAAAGGGCTCTGGCAGTTAAGAATCTCTGGTaGAATTTTGCTCTCCTGTAC +
Preference number: 4 (lower is better)
Translates to: QMVPNGVDFSAHFERALAVKNLW*NFALLY
Trigger: GTACAGGAGAGCAAAATTGCACCAGAGATTCTTAAC...TGCCAGAGCCCTTTCAAAATGAGCAGAGAAGTCCACACCATTAGGGACCATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp TGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAATTCTGGGTTGCTGCCTaGAGCCACTATAGTAACATT +
Preference number: 4 (lower is better)
Translates to: WYCDGSIHSTSCPFSAPQFWVAA*SHYSNI
Trigger: AATGTTACTATAGTGGCTGCAGGCAGCAACCCAGAA...TTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp TGCTATGAAGCCTGGCGATTTAGAGTTTTGCTTAACTATGAAACCACAGAACATCAAAACCCGCAAGCCTaGTGGTGGAGCTTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: CYEAWRFRVLLNYETTEHQNPQA*WWSFSL
Trigger: CAAGCTGAAGCTCCACCAGCAGGCTTGCGGGTTTTG...ATGTTCTGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCAGGCTTCATAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR CCA 90 bp AAATGTGGCTGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAACCACAGTCCCATCTaGTACCTCTCCGAGGGCTAC +
Preference number: 4 (lower is better)
Translates to: KCGCIEKTANSSNVCATKNHSPI*YLSEGY
Trigger: GTAGCCCTCGGAGAGGTACCAGATGGGACTGTGGTT...CTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCAGCCACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CTTGAGCCTTCTGCTTCTCAATATCTACCCTCTTATGGCTGCAAGATCATGACTTGGATTAAAAGGACTTaGTGCAGAGTTCAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: LEPSASQYLPSYGCKIMTWIKRT*CRVQGG
Trigger: CCCTCCCTGAACTCTGCACCAAGTCCTTTTAATCCA...AGTCATGATCTTGCAGCCATAAGAGGGTAGATATTGAGAAGCAGAAGGCTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CTGAATGATGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGTGGATTAAAAGGACTTaGTGCAGAGTTCAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: LNDGTVMEASILPHVPLVWIKRT*CRVQGG
Trigger: CCCTCCCTGAACTCTGCACCAAGTCCTTTTAATCCA...CACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCATCATTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCAGCGGGGTGGTAGAGTaGATGGACGGGGACGTCATC +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGSGVVE*MDGDVI
Trigger: GATGACGTCCCCGTCCATCCACTCTACCACCCCGCT...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAAGTAAGTAAAGGTGGCTaGATAGTGCATTCGTGGGTT +
Preference number: 4 (lower is better)
Translates to: WYCDGSIHSTSCPFSAPQVSKGG*IVHSWV
Trigger: AACCCACGAATGCACTATCCAGCCACCTTTACTTAC...TTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AATCATGACCTGTGGCACAAAGCGGAATTTTTACAATATGTGCATGGAAAGCAATGTGGTAGTGAGTGGTaGCGGACATACCGAGGGACA +
Preference number: 4 (lower is better)
Translates to: NHDLWHKAEFLQYVHGKQCGSEW*RTYRGT
Trigger: TGTCCCTCGGTATGTCCGCCACCACTCACTACCACA...TTGCTTTCCATGCACATATTGTAAAAATTCCGCTTTGTGCCACAGGTCATGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCTGGAAGGGTCCACTCTaGCTTTGGGAAGAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGWKGPL*LWEEPG
Trigger: CCCCGGCTCTTCCCAAAGCCAGAGTGGACCCTTCCA...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CTGAATGATGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGGCCATAGTAGAGATATaGAGTGCTGCTGGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: LNDGTVMEASILPHVPLVAIVEI*SAAGLE
Trigger: TTCCAGACCAGCAGCACTCCATATCTCTACTATGGC...CACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCATCATTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp GCTTATTTATCTAAGCATACTTGGTATACGGCCTTTAGAAGGCAAAGTGTTTTGATGGCGGAAGCATTCTaGAAGGAGACCGGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: AYLSKHTWYTAFRRQSVLMAEAF*KETGLP
Trigger: GGGGAGACCGGTCTCCTTCCAGAATGCTTCCGCCAT...CAAAACACTTTGCCTTCTAAAGGCCGTATACCAAGTATGCTTAGATAAATAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TGCTATGAAGCCTGGCGATTTAGAGTTTTGCTTAACTATGAAACCACAGAACATTGCCATTCGAGGTGGTaGTGCATGGCGGAAGCATTC +
Preference number: 4 (lower is better)
Translates to: CYEAWRFRVLLNYETTEHCHSRW*CMAEAF
Trigger: GAATGCTTCCGCCATGCACCACCACCTCGAATGGCA...ATGTTCTGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCAGGCTTCATAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp GCTTATTTATCTAAGCATACTTGGTATACGGCCTTTAGAAGGCAAAGTGTTTTGGATACGTGTGGGATGTaGCCCCCAGATACCACTGGG +
Preference number: 4 (lower is better)
Translates to: AYLSKHTWYTAFRRQSVLDTCGM*PPDTTG
Trigger: CCCAGTGGTATCTGGGGGCCACATCCCACACGTATC...CAAAACACTTTGCCTTCTAAAGGCCGTATACCAAGTATGCTTAGATAAATAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TCCTTAAAGCTGTACACACATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTTAGTGCACCTCAACTaGTTTTGTGAGCTGTCTGCG +
Preference number: 4 (lower is better)
Translates to: SLKLYTHLLPSEFITDGPLVHLN*FCELSA
Trigger: CGCAGACAGCTCACAAAACCAGTTGAGGTGCACTAA...GGGACCATCTGTGATAAATTCAGAAGGGAGGAGATGTGTGTACAGCTTTAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp GCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTTTGGTAAGGCTGGTTaGTTAAGAATCTCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: ANASCFHVLTWILGQSLSFGKAG*LRISGA
Trigger: TGCACCAGAGATTCTTAACCAACCAGCCTTACCAAA...GGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp GCTTATTTATCTAAGCATACTTGGTATACGGCCTTTAGAAGGCAAAGTGTTTTGGTCTGTAGGTCCCCGTaGGCCATATGTCCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: AYLSKHTWYTAFRRQSVLVCRSP*AICPLS
Trigger: GCTGAGAGGACATATGGCCCACGGGGACCTACAGAC...CAAAACACTTTGCCTTCTAAAGGCCGTATACCAAGTATGCTTAGATAAATAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp GCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCCAAATAAATGGACAGTaGTGTGCTTCAAGCTACCAC +
Preference number: 4 (lower is better)
Translates to: ANASCFHVLTWILGQSLSQINGQ*CASSYH
Trigger: GTGGTAGCTTGAAGCACACCACTGTCCATTTATTTG...GGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCGGAATTGCCAGGAACTAGTACATaGTTCCACAGTAGTAGTAAG +
Preference number: 4 (lower is better)
Translates to: SCFHVLTWILGQSLSSELPGTST*FHSSSK
Trigger: CTTACTACTACTGTGGAACCATGTACTAGTTCCTGG...CAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AAAGGTGGGTTTGAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCTCTGGAACTCTGATATaGGTTAAAATTTGTGAGACA +
Preference number: 4 (lower is better)
Translates to: KGGFEKDQRTRGPLGFEGSGTLI*VKICET
Trigger: TGTCTCACAAATTTTAACCCATATCAGAGTTCCAGA...GCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTCAAACCCACCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AGCCCCTTGCCCTCCTTGGCCCTCCATTGTAAGAAATACAAATGTCAAAGGCTGCACAATCATGACCTGTaGCACAAAGCGGAATTTTTA +
Preference number: 4 (lower is better)
Translates to: SPLPSLALHCKKYKCQRLHNHDL*HKAEFL
Trigger: TAAAAATTCCGCTTTGTGCCACAGGTCATGATTGTG...CAGCCTTTGACATTTGTATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp GCTTATTTATCTAAGCATACTTGGTATACGGCCTTTAGAAGGCAAAGTGTTTTGCTCTGTTGGTCTCGGTaGCTGGTAGTGACCTGCGGA +
Preference number: 4 (lower is better)
Translates to: AYLSKHTWYTAFRRQSVLLCWSR*LVVTCG
Trigger: TCCGCAGGTCACTACCAGCCACCGAGACCAACAGAG...CAAAACACTTTGCCTTCTAAAGGCCGTATACCAAGTATGCTTAGATAAATAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371432.7
ENST00000371438.5
ENST00000647337.2
CDS-3UTR TCA 90 bp AAACTAGGTTTAGAGTCATCAAGCTTCTGTCTGTGCCTTCTGGGTTCCCGAGGTCAAATCTCAGATCGTTaGACCTTGCTACTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: KLGLESSSFCLCLLGSRGQISDR*TLLLGF
Trigger: AAAACCAAGTAGCAAGGTTCAACGATCTGAGATTTG...ACCTCGGGAACCCAGAAGGCACAGACAGAAGCTTGATGACTCTAAACCTAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR TCA 90 bp TGCTATGAAGCCTGGCGATTTAGAGTTTTGCTTAACTATGAAACCACAGAACATGCTCTCAGTGAGGGATaGAATGCTTGGGAACTGCCT +
Preference number: 4 (lower is better)
Translates to: CYEAWRFRVLLNYETTEHALSEG*NAWELP
Trigger: AGGCAGTTCCCAAGCATTTCATCCCTCACTGAGAGC...ATGTTCTGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCAGGCTTCATAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CTGAATGATGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGAAACTGATAGGATCCTaGCGAAGTGCCATAGTAGAG +
Preference number: 4 (lower is better)
Translates to: LNDGTVMEASILPHVPLVKLIGS*RSAIVE
Trigger: CTCTACTATGGCACTTCGTCAGGATCCTATCAGTTT...CACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCATCATTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp TGCTATGAAGCCTGGCGATTTAGAGTTTTGCTTAACTATGAAACCACAGAACATCCACTGGGCCACTGCTaGGGAATTTCAATATGGTCG +
Preference number: 4 (lower is better)
Translates to: CYEAWRFRVLLNYETTEHPLGHC*GISIWS
Trigger: CGACCATATTGAAATTCCTCAGCAGTGGCCCAGTGG...ATGTTCTGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCAGGCTTCATAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp AGCCCCTTGCCCTCCTTGGCCCTCCATTGTAAGAAATACAAATGTCAAAGGCTGTATATATGTATATATTaGTACGTGTGGGATGTGGCC +
Preference number: 4 (lower is better)
Translates to: SPLPSLALHCKKYKCQRLYICIY*YVWDVA
Trigger: GGCCACATCCCACACGTATCAATATATACATATATA...CAGCCTTTGACATTTGTATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp TGCTATGAAGCCTGGCGATTTAGAGTTTTGCTTAACTATGAAACCACAGAACATACACAGCTGCCACCGTaGGGGTGTGAAGTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: CYEAWRFRVLLNYETTEHTQLPP*GCEVSK
Trigger: CTTTGAAACTTCACACCCTCACGGTGGCAGCTGTGT...ATGTTCTGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCAGGCTTCATAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp TGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAATGTGCGGCTTTTAGCTaGCTATGTCTTTGCTATGAA +
Preference number: 4 (lower is better)
Translates to: WYCDGSIHSTSCPFSAPQCAAFS*LCLCYE
Trigger: TTCATAGCAAAGACATAGTCAGCTAAAAGCCGCACA...TTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp TGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAGAACCACGTGGAAATCTGCCATGTaGCTGCCAGGAGTGGTCAAA +
Preference number: 4 (lower is better)
Translates to: CIEKTANSSNVCATKRTTWKSAM*LPGVVK
Trigger: TTTGACCACTCCTGGCAGTCACATGGCAGATTTCCA...CGTGGTTCTCTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp GTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAACTGGTTTGGTGGTGTCATTAGATaGTCCTTGTTTGGATTAAGG +
Preference number: 4 (lower is better)
Translates to: VMEASILPHVPLVHLNWFGGVIR*SLFGLR
Trigger: CCTTAATCCAAACAAGGATCATCTAATGACACCACC...AAACCAGTTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp TCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCGGAATTGAAAATGTGGCTGCATTaGAAAGACTGCAAATTCCAG +
Preference number: 4 (lower is better)
Translates to: SCFHVLTWILGQSLSSELKMWLH*KDCKFQ
Trigger: CTGGAATTTGCAGTCTTTTCAATGCAGCCACATTTT...CAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp TCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCGGAATTGCCTGTTCTGGAACTCTaGTATGGGTTAAAATTTGTG +
Preference number: 4 (lower is better)
Translates to: SCFHVLTWILGQSLSSELPVLEL*YGLKFV
Trigger: CACAAATTTTAACCCATATCAGAGTTCCAGAACAGG...CAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CTTGAGCCTTCTGCTTCTCAATATCTACCCTCTTATGGCTGCAAGATCATGACTCAAAAGAAGTTTTGCTaGCATGGTGTCACTGTGCTG +
Preference number: 4 (lower is better)
Translates to: LEPSASQYLPSYGCKIMTQKKFC*HGVTVL
Trigger: CAGCACAGTGACACCATGTCAGCAAAACTTCTTTTG...AGTCATGATCTTGCAGCCATAAGAGGGTAGATATTGAGAAGCAGAAGGCTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371432.7
ENST00000371438.5
ENST00000647337.2
CDS-3UTR TCA 90 bp TTGCTTGAGAAACAAAGCCTTCCCTCCTCCCAAGTTGAAAGAAATAAAGGAGTCATGGGGCTGAGGAGGTaGGAAATCAAGTTTGATGAG +
Preference number: 4 (lower is better)
Translates to: LLEKQSLPSSQVERNKGVMGLRR*EIKFDE
Trigger: CTCATCAAACTTGATTTCTCACCTCCTCAGCCCCAT...GACTCCTTTATTTCTTTCAACTTGGGAGGAGGGAAGGCTTTGTTTCTCAAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000646519.1
CDS-3UTR GCA 90 bp TGCTATGAAGCCTGGCGATTTAGAGTTTTGCTTAACTATGAAACCACAGAACATTCAAGCTTCTGTCTGTaGCTTCTGGGTTCCCGAGGT +
Preference number: 4 (lower is better)
Translates to: CYEAWRFRVLLNYETTEHSSFCL*LLGSRG
Trigger: ACCTCGGGAACCCAGAAGGCACAGACAGAAGCTTGA...ATGTTCTGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCAGGCTTCATAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp TGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAGAACCACGAGTAGAGATATGGAGTaGTGCTGGTCTGGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: CIEKTANSSNVCATKRTTSRDME*CWSGRV
Trigger: GACCCTTCCAGACCAGCAGCACTCCATATCTCTACT...CGTGGTTCTCTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp ACTTTTGCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCAGGATCCTGACGAAGTaGCATAGTAGAGATATGGAG +
Preference number: 4 (lower is better)
Translates to: TFANASCFHVLTWILGQSRILTK*HSRDME
Trigger: CTCCATATCTCTACTATGGCACTTCGTCAGGATCCT...GGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGCAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp TGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAGAACCACGGATTTAATAGCGTGCTaGCATTCGAGGTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: CIEKTANSSNVCATKRTTDLIAC*HSRWWC
Trigger: GCACCACCACCTCGAATGGCAGCACGCTATTAAATC...CGTGGTTCTCTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp TGCTATGAAGCCTGGCGATTTAGAGTTTTGCTTAACTATGAAACCACAGAACATCTCAGCTCAGCTACCTaGTGGAACCTGCTGCCTTTT +
Preference number: 4 (lower is better)
Translates to: CYEAWRFRVLLNYETTEHLSSAT*WNLLPF
Trigger: AAAAGGCAGCAGGTTCCAGCAGGTAGCTGAGCTGAG...ATGTTCTGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCAGGCTTCATAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp TGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAGAACCACGAATCTGCCATGTGACTaGCAGGAGTGGTCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: CIEKTANSSNVCATKRTTNLPCD*QEWSKC
Trigger: GCACTTTGACCACTCCTGGCAGTCACATGGCAGATT...CGTGGTTCTCTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp AGCCCCTTGCCCTCCTTGGCCCTCCATTGTAAGAAATACAAATGTCAAAGGCTGTTTGGATTAAGGATTTaGACTTGGAAATCTGCCATG +
Preference number: 4 (lower is better)
Translates to: SPLPSLALHCKKYKCQRLFGLRI*TWKSAM
Trigger: CATGGCAGATTTCCAAGTGCAAATCCTTAATCCAAA...CAGCCTTTGACATTTGTATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp ATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTAATGGTGTGGACTTCTCTATCTCTGCTAAATTCTaGTTGGGTGGGTGGAGGATT +
Preference number: 4 (lower is better)
Translates to: ISSLLNLSQMVPNGVDFSISAKF*LGGWRI
Trigger: AATCCTCCACCCACCCAAGCAGAATTTAGCAGAGAT...AGAGAAGTCCACACCATTAGGGACCATCTGTGATAAATTCAGAAGGGAGGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp CTTGAGCCTTCTGCTTCTCAATATCTACCCTCTTATGGCTGCAAGATCATGACTAAATGGACAGTGGTGTaGTTCAAGCTACCACACACA +
Preference number: 4 (lower is better)
Translates to: LEPSASQYLPSYGCKIMTKWTVV*FKLPHT
Trigger: TGTGTGTGGTAGCTTGAAGCACACCACTGTCCATTT...AGTCATGATCTTGCAGCCATAAGAGGGTAGATATTGAGAAGCAGAAGGCTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp CTTGAGCCTTCTGCTTCTCAATATCTACCCTCTTATGGCTGCAAGATCATGACTTTCTGGGTTGCTGCCTaGAGCCACTATAGTAACATT +
Preference number: 4 (lower is better)
Translates to: LEPSASQYLPSYGCKIMTFWVAA*SHYSNI
Trigger: AATGTTACTATAGTGGCTGCAGGCAGCAACCCAGAA...AGTCATGATCTTGCAGCCATAAGAGGGTAGATATTGAGAAGCAGAAGGCTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp GCTTATTTATCTAAGCATACTTGGTATACGGCCTTTAGAAGGCAAAGTGTTTTGAACCACAGTCCCATCTaGTACCTCTCCGAGGGCTAC +
Preference number: 4 (lower is better)
Translates to: AYLSKHTWYTAFRRQSVLNHSPI*YLSEGY
Trigger: GTAGCCCTCGGAGAGGTACCAGATGGGACTGTGGTT...CAAAACACTTTGCCTTCTAAAGGCCGTATACCAAGTATGCTTAGATAAATAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAGAACCACGCACCTACTCTCATACTaGGATGAGGAATGCGCCCTA +
Preference number: 4 (lower is better)
Translates to: CIEKTANSSNVCATKRTTHLLSY*DEECAL
Trigger: TAGGGCGCATTCCTCATCCCAGTATGAGAGTAGGTG...CGTGGTTCTCTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TGCTATGAAGCCTGGCGATTTAGAGTTTTGCTTAACTATGAAACCACAGAACATTGGATAGTGCATTCGTaGGTTGGAGAAGCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: CYEAWRFRVLLNYETTEHWIVHS*VGEAAL
Trigger: GAGAGCCGCTTCTCCAACCCACGAATGCACTATCCA...ATGTTCTGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCAGGCTTCATAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TCCTTAAAGCTGTACACACATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCGTAAGTAAAGGTGGCTaGATAGTGCATTCGTGGGTT +
Preference number: 4 (lower is better)
Translates to: SLKLYTHLLPSEFITDGPVSKGG*IVHSWV
Trigger: AACCCACGAATGCACTATCCAGCCACCTTTACTTAC...GGGACCATCTGTGATAAATTCAGAAGGGAGGAGATGTGTGTACAGCTTTAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCAGGTGTGGTAGTGAGTaGTGGCGGACATACCGAGGG +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGRCGSE*WRTYRG
Trigger: CCCTCGGTATGTCCGCCACCACTCACTACCACACCT...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AATAGGATGCAGCTGGCACTGGCGGTAGCATTTTTATGTCAATTAATTAAAATTGGAGTGCTGCTGGTCTaGAAGGGTCCACTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: NRMQLALAVAFLCQLIKIGVLLV*KGPLWL
Trigger: AAGCCAGAGTGGACCCTTCCAGACCAGCAGCACTCC...AATTTTAATTAATTGACATAAAAATGCTACCGCCAGTGCCAGCTGCATCCTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCGGAGTGCTGCTGGTCTaGAAGGGTCCACTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGGVLLV*KGPLWL
Trigger: AAGCCAGAGTGGACCCTTCCAGACCAGCAGCACTCC...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AAATGTGGCTGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGGATATGGAGTGCTGCTaGTCTGGAAGGGTCCACTCT +
Preference number: 4 (lower is better)
Translates to: KCGCIEKTANSSNVCATKDMECC*SGRVHS
Trigger: AGAGTGGACCCTTCCAGACCAGCAGCACTCCATATC...CTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCAGCCACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCCGAGGTGGTGGTGCATaGCGGAAGCATTCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGRGGGA*RKHSGR
Trigger: CCTTCCAGAATGCTTCCGCCATGCACCACCACCTCG...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp GCTTATTTATCTAAGCATACTTGGTATACGGCCTTTAGAAGGCAAAGTGTTTTGGCCCCCAGATACCACTaGGCCACTGCTGAGGAATTT +
Preference number: 4 (lower is better)
Translates to: AYLSKHTWYTAFRRQSVLAPRYH*ATAEEF
Trigger: AAATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGC...CAAAACACTTTGCCTTCTAAAGGCCGTATACCAAGTATGCTTAGATAAATAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TGCTATGAAGCCTGGCGATTTAGAGTTTTGCTTAACTATGAAACCACAGAACATAGCTCAGCTACCTGCTaGAACCTGCTGCCTTTTCAG +
Preference number: 4 (lower is better)
Translates to: CYEAWRFRVLLNYETTEHSSATC*NLLPFQ
Trigger: CTGAAAAGGCAGCAGGTTCCAGCAGGTAGCTGAGCT...ATGTTCTGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCAGGCTTCATAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAGAACCACGTTCTGCTTGGGTGGGTaGAGGATTCCAATGAAGGGA +
Preference number: 4 (lower is better)
Translates to: CIEKTANSSNVCATKRTTFCLGG*RIPMKG
Trigger: TCCCTTCATTGGAATCCTCCACCCACCCAAGCAGAA...CGTGGTTCTCTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CTTGAGCCTTCTGCTTCTCAATATCTACCCTCTTATGGCTGCAAGATCATGACTTTCCATGTATTAACCTaGATTCTGGGCCAGTCCCTT +
Preference number: 4 (lower is better)
Translates to: LEPSASQYLPSYGCKIMTFHVLT*ILGQSL
Trigger: AAGGGACTGGCCCAGAATCCAGGTTAATACATGGAA...AGTCATGATCTTGCAGCCATAAGAGGGTAGATATTGAGAAGCAGAAGGCTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR CAA 72 bp GGTAAGGCTGGTTGGTTAAGAATCTCTGGTGCAATTTaGCTCTCCTGTACTAGGTGTCTCATAATTGAACCC +
Preference number: 4 (lower is better)
Translates to: GKAGWLRISGAI*LSCTRCLIIEP
Trigger: GGGTTCAATTATGAGACACCTAGTACAGGAGAGCAAAATTGCACCAGAGATTCTTAACCAACCAGCCTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp TGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAACAAATCTCAGATCGTTaGACCTTGCTACTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: WYCDGSIHSTSCPFSAPQQISDR*TLLLGF
Trigger: AAAACCAAGTAGCAAGGTTCAACGATCTGAGATTTG...TTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp AAATGTGGCTGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGCTTGGGGAGGATTTGTaGAGACGGTTATGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: KCGCIEKTANSSNVCATKLGEDL*RRLWSR
Trigger: CCTTGACCATAACCGTCTTCACAAATCCTCCCCAAG...CTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCAGCCACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CTTTGCTTTGGTCTTGAAATCACAAATCAAACACATGACCCAGTGCAAATTAAGCCACTGGGCCACTGCTaGGGAATTTCAATATGGTCG +
Preference number: 4 (lower is better)
Translates to: LCFGLEITNQTHDPVQIKPLGHC*GISIWS
Trigger: CGACCATATTGAAATTCCTCAGCAGTGGCCCAGTGG...CTTAATTTGCACTGGGTCATGTGTTTGATTTGTGATTTCAAGACCAAAGCAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp TGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAGAACCACGGACCTGCAGCATGTCTaGAAGCAGAAATTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: CIEKTANSSNVCATKRTTDLQHV*KQKLEE
Trigger: CTCTTCCAATTTCTGCTTTCAGACATGCTGCAGGTC...CGTGGTTCTCTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp TGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAGAACCACGACTCCCAAAGGACAGTaGTGTCATTCTGCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: CIEKTANSSNVCATKRTTTPKGQ*CHSAPL
Trigger: TAGAGGAGCAGAATGACATCACTGTCCTTTGGGAGT...CGTGGTTCTCTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CTTGAGCCTTCTGCTTCTCAATATCTACCCTCTTATGGCTGCAAGATCATGACTGGTGGTGTCATTAGATaGTCCTTGTTTGGATTAAGG +
Preference number: 4 (lower is better)
Translates to: LEPSASQYLPSYGCKIMTGGVIR*SLFGLR
Trigger: CCTTAATCCAAACAAGGATCATCTAATGACACCACC...AGTCATGATCTTGCAGCCATAAGAGGGTAGATATTGAGAAGCAGAAGGCTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp TGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAAAAAATGTGGCTGCATTaGAAAGACTGCAAATTCCAG +
Preference number: 4 (lower is better)
Translates to: WYCDGSIHSTSCPFSAPQKMWLH*KDCKFQ
Trigger: CTGGAATTTGCAGTCTTTTCAATGCAGCCACATTTT...TTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp GTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAACTGGTTTAAAATGTGGCTGCATTaGAAAGACTGCAAATTCCAG +
Preference number: 4 (lower is better)
Translates to: VMEASILPHVPLVHLNWFKMWLH*KDCKFQ
Trigger: CTGGAATTTGCAGTCTTTTCAATGCAGCCACATTTT...AAACCAGTTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp AAATGTGGCTGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGACTCATCCACAATCATaGCCTGTGGCACAAAGCGGA +
Preference number: 4 (lower is better)
Translates to: KCGCIEKTANSSNVCATKTHPQS*PVAQSG
Trigger: TCCGCTTTGTGCCACAGGTCATGATTGTGGATGAGT...CTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCAGCCACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp ACTAGGACCAGAGAGCCCTTTCCTGCTATTTGCTTGAGAAACAAAGCCTTCCCTAGAAATAAAGGAGTCTaGACTAATCAAAACCCGCAA +
Preference number: 4 (lower is better)
Translates to: TRTREPFPAICLRNKAFPRNKGV*TNQNPQ
Trigger: TTGCGGGTTTTGATTAGTTCAGACTCCTTTATTTCT...AGGGAAGGCTTTGTTTCTCAAGCAAATAGCAGGAAAGGGCTCTCTGGTCCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000646519.1
CDS-3UTR GCA 90 bp ACTAGGACCAGAGAGCCCTTTCCTGCTATTTGCTTGAGAAACAAAGCCTTCCCTCAGATCGTTGAACCTTaGTACTTGGTTTTTCATAAC +
Preference number: 4 (lower is better)
Translates to: TRTREPFPAICLRNKAFPQIVEP*YLVFHN
Trigger: GTTATGAAAAACCAAGTAGCAAGGTTCAACGATCTG...AGGGAAGGCTTTGTTTCTCAAGCAAATAGCAGGAAAGGGCTCTCTGGTCCTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000646519.1
CDS-3UTR GCA 90 bp AATCATGACCTGTGGCACAAAGCGGAATTTTTACAATATGTGCATGGAAAGCAAGAAATGCTTGGGAACTaGCTGGGGTCTGAAAAAGGG +
Preference number: 4 (lower is better)
Translates to: NHDLWHKAEFLQYVHGKQEMLGN*LGSEKG
Trigger: CCCTTTTTCAGACCCCAGGCAGTTCCCAAGCATTTC...TTGCTTTCCATGCACATATTGTAAAAATTCCGCTTTGTGCCACAGGTCATGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCCATTCGAGGTGGTGGTaGATGGCGGAAGCATTCTGG +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGHSRWW*MAEAFW
Trigger: CCAGAATGCTTCCGCCATGCACCACCACCTCGAATG...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp AATAGGATGCAGCTGGCACTGGCGGTAGCATTTTTATGTCAATTAATTAAAATTCATTCGAGGTGGTGGTaGATGGCGGAAGCATTCTGG +
Preference number: 4 (lower is better)
Translates to: NRMQLALAVAFLCQLIKIHSRWW*MAEAFW
Trigger: CCAGAATGCTTCCGCCATGCACCACCACCTCGAATG...AATTTTAATTAATTGACATAAAAATGCTACCGCCAGTGCCAGCTGCATCCTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp TGCTATGAAGCCTGGCGATTTAGAGTTTTGCTTAACTATGAAACCACAGAACATGATTTAATAGCGTGCTaGCATTCGAGGTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: CYEAWRFRVLLNYETTEHDLIAC*HSRWWC
Trigger: GCACCACCACCTCGAATGGCAGCACGCTATTAAATC...ATGTTCTGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCAGGCTTCATAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp AATCATGACCTGTGGCACAAAGCGGAATTTTTACAATATGTGCATGGAAAGCAAAAACAGTTGGGGAACTaGTGTGGCTTCCATCAGCGT +
Preference number: 4 (lower is better)
Translates to: NHDLWHKAEFLQYVHGKQKQLGN*CGFHQR
Trigger: ACGCTGATGGAAGCCACAGCAGTTCCCCAACTGTTT...TTGCTTTCCATGCACATATTGTAAAAATTCCGCTTTGTGCCACAGGTCATGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp CTTTGCTTTGGTCTTGAAATCACAAATCAAACACATGACCCAGTGCAAATTAAGCTACCTGCTGGAACCTaGTGCCTTTTCAGAGGACCT +
Preference number: 4 (lower is better)
Translates to: LCFGLEITNQTHDPVQIKLPAGT*CLFRGP
Trigger: AGGTCCTCTGAAAAGGCAGCAGGTTCCAGCAGGTAG...CTTAATTTGCACTGGGTCATGTGTTTGATTTGTGATTTCAAGACCAAAGCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp CTTTGCTTTGGTCTTGAAATCACAAATCAAACACATGACCCAGTGCAAATTAAGCTCAGCTCAGCTACCTaGTGGAACCTGCTGCCTTTT +
Preference number: 4 (lower is better)
Translates to: LCFGLEITNQTHDPVQIKLSSAT*WNLLPF
Trigger: AAAAGGCAGCAGGTTCCAGCAGGTAGCTGAGCTGAG...CTTAATTTGCACTGGGTCATGTGTTTGATTTGTGATTTCAAGACCAAAGCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp AAATGTGGCTGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAATCTGCCATGTGACTaGCAGGAGTGGTCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: KCGCIEKTANSSNVCATKNLPCD*QEWSKC
Trigger: GCACTTTGACCACTCCTGGCAGTCACATGGCAGATT...CTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCAGCCACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTTTTGGATTAAGGATTTaGACTTGGAAATCTGCCATG +
Preference number: 4 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPFGLRI*TWKSAM
Trigger: CATGGCAGATTTCCAAGTGCAAATCCTTAATCCAAA...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp AGCCCCTTGCCCTCCTTGGCCCTCCATTGTAAGAAATACAAATGTCAAAGGCTGGTAGTAGTAAGACTTTaGTTTGGTCTTGAAATCACA +
Preference number: 4 (lower is better)
Translates to: SPLPSLALHCKKYKCQRLVVVRL*FGLEIT
Trigger: TGTGATTTCAAGACCAAAGCAAAGTCTTACTACTAC...CAGCCTTTGACATTTGTATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp ATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTAATGGTGTGGACTTCTCTTTCCAGCAATGTTTGTaGTACAAAGAGAACCACGCT +
Preference number: 4 (lower is better)
Translates to: ISSLLNLSQMVPNGVDFSFQQCL*YKENHA
Trigger: AGCGTGGTTCTCTTTGTAGCACAAACATTGCTGGAA...AGAGAAGTCCACACCATTAGGGACCATCTGTGATAAATTCAGAAGGGAGGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp TGCTATGAAGCCTGGCGATTTAGAGTTTTGCTTAACTATGAAACCACAGAACATCTCCTGGAGAAAGTTTaGACCGCACTTGTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: CYEAWRFRVLLNYETTEHLLEKV*TALVVL
Trigger: CAGAACCACAAGTGCGGTGCAAACTTTCTCCAGGAG...ATGTTCTGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCAGGCTTCATAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371432.7
ENST00000647337.2
CDS-3UTR GCA 90 bp TACTGTAACTTTAATTGCTCTGTGATAGGTAGCTACTTGGGGAGGATTTGTGAACTCCTGGAGAAAGTTTaGACCGCACTTGTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: YCNFNCSVIGSYLGRICELLEKV*TALVVL
Trigger: CAGAACCACAAGTGCGGTGCAAACTTTCTCCAGGAG...TTCACAAATCCTCCCCAAGTAGCTACCTATCACAGAGCAATTAAAGTTACAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR GCA 90 bp ACTTTTGCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCAGAGAGCCCTTTCCTaGTATTTGCTTGAGAAACAA +
Preference number: 4 (lower is better)
Translates to: TFANASCFHVLTWILGQSQRALS*YLLEKQ
Trigger: TTGTTTCTCAAGCAAATAGCAGGAAAGGGCTCTCTG...GGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGCAAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR CCA 90 bp CTTCTGTCTGTGCCTTCTGGGTTCCCGAGGTCCATCTACTGTAACTTTAATTGCTTGAACCTTGCTACTTaGTTTTTCATAACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: LLSVPSGFPRSIYCNFNCLNLAT*FFITAE
Trigger: CTCTGCTGTTATGAAAAACCAAGTAGCAAGGTTCAA...GCAATTAAAGTTACAGTAGATGGACCTCGGGAACCCAGAAGGCACAGACAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR CCA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTTTGAACCTTGCTACTTaGTTTTTCATAACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPLNLAT*FFITAE
Trigger: CTCTGCTGTTATGAAAAACCAAGTAGCAAGGTTCAA...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AATCATGACCTGTGGCACAAAGCGGAATTTTTACAATATGTGCATGGAAAGCAACACCTACTCTCATACTaGGATGAGGAATGCGCCCTA +
Preference number: 4 (lower is better)
Translates to: NHDLWHKAEFLQYVHGKQHLLSY*DEECAL
Trigger: TAGGGCGCATTCCTCATCCCAGTATGAGAGTAGGTG...TTGCTTTCCATGCACATATTGTAAAAATTCCGCTTTGTGCCACAGGTCATGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCTGTGGTAGTGAGTGGTaGCGGACATACCGAGGGACA +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGCGSEW*RTYRGT
Trigger: TGTCCCTCGGTATGTCCGCCACCACTCACTACCACA...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AAATTAGAAAACCACATCACTCCAGCATTTCATGCTGATAAAGGGCTAAAGGTTGATATGGAGTGCTGCTaGTCTGGAAGGGTCCACTCT +
Preference number: 4 (lower is better)
Translates to: KLENHITPAFHADKGLKVDMECC*SGRVHS
Trigger: AGAGTGGACCCTTCCAGACCAGCAGCACTCCATATC...AACCTTTAGCCCTTTATCAGCATGAAATGCTGGAGTGATGTGGTTTTCTAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AAATTAGAAAACCACATCACTCCAGCATTTCATGCTGATAAAGGGCTAAAGGTTGTTGGGGAACTGCTGTaGCTTCCATCAGCGTCAACA +
Preference number: 4 (lower is better)
Translates to: KLENHITPAFHADKGLKVVGELL*LPSAST
Trigger: TGTTGACGCTGATGGAAGCCACAGCAGTTCCCCAAC...AACCTTTAGCCCTTTATCAGCATGAAATGCTGGAGTGATGTGGTTTTCTAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCGCCCCCAGATACCACTaGGCCACTGCTGAGGAATTT +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGAPRYH*ATAEEF
Trigger: AAATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGC...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AATAGGATGCAGCTGGCACTGGCGGTAGCATTTTTATGTCAATTAATTAAAATTGCCCCCAGATACCACTaGGCCACTGCTGAGGAATTT +
Preference number: 4 (lower is better)
Translates to: NRMQLALAVAFLCQLIKIAPRYH*ATAEEF
Trigger: AAATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGC...AATTTTAATTAATTGACATAAAAATGCTACCGCCAGTGCCAGCTGCATCCTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp GTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAACTGGTTTCTTTGCTATGAAGCCTaGCGATTTAGAGTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: VMEASILPHVPLVHLNWFLCYEA*RFRVLL
Trigger: AAGCAAAACTCTAAATCGCCAGGCTTCATAGCAAAG...AAACCAGTTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AAATTAGAAAACCACATCACTCCAGCATTTCATGCTGATAAAGGGCTAAAGGTTTCCTGCAATGCTGGGTaGCCTACAAAGGTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: KLENHITPAFHADKGLKVSCNAG*PTKVGL
Trigger: CAAACCCACCTTTGTAGGCCACCCAGCATTGCAGGA...AACCTTTAGCCCTTTATCAGCATGAAATGCTGGAGTGATGTGGTTTTCTAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AAATGTGGCTGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGCTTCTAAAGTGTTTCTaGGTTGCTGCCTGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: KCGCIEKTANSSNVCATKLLKCF*VAACSH
Trigger: GTGGCTGCAGGCAGCAACCCAGAAACACTTTAGAAG...CTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCAGCCACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CTGAATGATGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCCAGGAACTAGTACATaGTTCCACAGTAGTAGTAAG +
Preference number: 4 (lower is better)
Translates to: LNDGTVMEASILPHVPLVPGTST*FHSSSK
Trigger: CTTACTACTACTGTGGAACCATGTACTAGTTCCTGG...CACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCATCATTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CTTGAGCCTTCTGCTTCTCAATATCTACCCTCTTATGGCTGCAAGATCATGACTCTAAAACCAAAGCTGTaGTACCTGTTCTGGAACTCT +
Preference number: 4 (lower is better)
Translates to: LEPSASQYLPSYGCKIMTLKPKL*YLFWNS
Trigger: AGAGTTCCAGAACAGGTACCACAGCTTTGGTTTTAG...AGTCATGATCTTGCAGCCATAAGAGGGTAGATATTGAGAAGCAGAAGGCTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp ATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTAATGGTGTGGACTTCTCTCTAAAACCAAAGCTGTaGTACCTGTTCTGGAACTCT +
Preference number: 4 (lower is better)
Translates to: ISSLLNLSQMVPNGVDFSLKPKL*YLFWNS
Trigger: AGAGTTCCAGAACAGGTACCACAGCTTTGGTTTTAG...AGAGAAGTCCACACCATTAGGGACCATCTGTGATAAATTCAGAAGGGAGGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AGCCCCTTGCCCTCCTTGGCCCTCCATTGTAAGAAATACAAATGTCAAAGGCTGATGGAAAGCAATTCTTaGGCAATAGCAATTGGAAAA +
Preference number: 4 (lower is better)
Translates to: SPLPSLALHCKKYKCQRLMESNS*AIAIGK
Trigger: TTTTCCAATTGCTATTGCCCAAGAATTGCTTTCCAT...CAGCCTTTGACATTTGTATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp AATAGGATGCAGCTGGCACTGGCGGTAGCATTTTTATGTCAATTAATTAAAATTTGCGCCCTAAATCACTaGGGCGGTCAGAGAACAAAC +
Preference number: 4 (lower is better)
Translates to: NRMQLALAVAFLCQLIKICALNH*GGQRTN
Trigger: GTTTGTTCTCTGACCGCCTCAGTGATTTAGGGCGCA...AATTTTAATTAATTGACATAAAAATGCTACCGCCAGTGCCAGCTGCATCCTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCTGCGCCCTAAATCACTaGGGCGGTCAGAGAACAAAC +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGCALNH*GGQRTN
Trigger: GTTTGTTCTCTGACCGCCTCAGTGATTTAGGGCGCA...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp AAATGTGGCTGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGCTGGGGTCTGTAATCTaGCTCTGTCCTTGTGGATTA +
Preference number: 4 (lower is better)
Translates to: KCGCIEKTANSSNVCATKLGSVI*LCPCGL
Trigger: TAATCCACAAGGACAGAGTCAGATTACAGACCCCAG...CTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCAGCCACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCGCTCTCAGTGAGGGATaGAATGCTTGGGAACTGCCT +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGALSEG*NAWELP
Trigger: AGGCAGTTCCCAAGCATTTCATCCCTCACTGAGAGC...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCAGAAGCGGCTCTCAGTaGGGGATGAAATGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGRSGSQ*GMKCLG
Trigger: TCCCAAGCATTTCATCCCTCACTGAGAGCCGCTTCT...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp TGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAATATATATGTATATATTaGTACGTGTGGGATGTGGCC +
Preference number: 4 (lower is better)
Translates to: WYCDGSIHSTSCPFSAPQYICIY*YVWDVA
Trigger: GGCCACATCCCACACGTATCAATATATACATATATA...TTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp TCCTTAAAGCTGTACACACATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCAAGAGTTATTCTGAATaGTGGTACTGTGATGGAAGC +
Preference number: 4 (lower is better)
Translates to: SLKLYTHLLPSEFITDGPKSYSE*WYCDGS
Trigger: GCTTCCATCACAGTACCATCATTCAGAATAACTCTT...GGGACCATCTGTGATAAATTCAGAAGGGAGGAGATGTGTGTACAGCTTTAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp TGCTATGAAGCCTGGCGATTTAGAGTTTTGCTTAACTATGAAACCACAGAACATGACCTGCAGCATGTCTaGAAGCAGAAATTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: CYEAWRFRVLLNYETTEHDLQHV*KQKLEE
Trigger: CTCTTCCAATTTCTGCTTTCAGACATGCTGCAGGTC...ATGTTCTGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCAGGCTTCATAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp AAATGTGGCTGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGGACCTGCAGCATGTCTaGAAGCAGAAATTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: KCGCIEKTANSSNVCATKDLQHV*KQKLEE
Trigger: CTCTTCCAATTTCTGCTTTCAGACATGCTGCAGGTC...CTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCAGCCACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp AAATTAGAAAACCACATCACTCCAGCATTTCATGCTGATAAAGGGCTAAAGGTTTGGAAATCTGCCATGTaGCTGCCAGGAGTGGTCAAA +
Preference number: 4 (lower is better)
Translates to: KLENHITPAFHADKGLKVWKSAM*LPGVVK
Trigger: TTTGACCACTCCTGGCAGTCACATGGCAGATTTCCA...AACCTTTAGCCCTTTATCAGCATGAAATGCTGGAGTGATGTGGTTTTCTAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp GCTTATTTATCTAAGCATACTTGGTATACGGCCTTTAGAAGGCAAAGTGTTTTGTGGAAATCTGCCATGTaGCTGCCAGGAGTGGTCAAA +
Preference number: 4 (lower is better)
Translates to: AYLSKHTWYTAFRRQSVLWKSAM*LPGVVK
Trigger: TTTGACCACTCCTGGCAGTCACATGGCAGATTTCCA...CAAAACACTTTGCCTTCTAAAGGCCGTATACCAAGTATGCTTAGATAAATAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp AAATTAGAAAACCACATCACTCCAGCATTTCATGCTGATAAAGGGCTAAAGGTTGGGGCCGTTAGGGTTTaGAGGCAAATCTCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: KLENHITPAFHADKGLKVGAVRV*RQISAK
Trigger: TTTAGCAGAGATTTGCCTTCAAACCCTAACGGCCCC...AACCTTTAGCCCTTTATCAGCATGAAATGCTGGAGTGATGTGGTTTTCTAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp AATCATGACCTGTGGCACAAAGCGGAATTTTTACAATATGTGCATGGAAAGCAACTACAAAGGTGGGTTTaGGAAGGACCAGAGAACAAG +
Preference number: 4 (lower is better)
Translates to: NHDLWHKAEFLQYVHGKQLQRWV*EGPENK
Trigger: CTTGTTCTCTGGTCCTTCTCAAACCCACCTTTGTAG...TTGCTTTCCATGCACATATTGTAAAAATTCCGCTTTGTGCCACAGGTCATGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp GCTTATTTATCTAAGCATACTTGGTATACGGCCTTTAGAAGGCAAAGTGTTTTGGCAAGTGAGAGGCAGTaGGACCGTCTAAAGAGCAAA +
Preference number: 4 (lower is better)
Translates to: AYLSKHTWYTAFRRQSVLASERQ*DRLKSK
Trigger: TTTGCTCTTTAGACGGTCTCACTGCCTCTCACTTGC...CAAAACACTTTGCCTTCTAAAGGCCGTATACCAAGTATGCTTAGATAAATAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp TGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAGAACCACGCAAAAGAAGTTTTGCTaGCATGGTGTCACTGTGCTG +
Preference number: 4 (lower is better)
Translates to: CIEKTANSSNVCATKRTTQKKFC*HGVTVL
Trigger: CAGCACAGTGACACCATGTCAGCAAAACTTCTTTTG...CGTGGTTCTCTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371432.7
ENST00000371438.5
ENST00000647337.2
CDS-3UTR GCA 90 bp ACTAGGACCAGAGAGCCCTTTCCTGCTATTTGCTTGAGAAACAAAGCCTTCCCTTACTGTAACTTTAATTaGTCTGTGATAGGTAGCTAC +
Preference number: 4 (lower is better)
Translates to: TRTREPFPAICLRNKAFPYCNFN*SVIGSY
Trigger: GTAGCTACCTATCACAGAGCAATTAAAGTTACAGTA...AGGGAAGGCTTTGTTTCTCAAGCAAATAGCAGGAAAGGGCTCTCTGGTCCTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000646519.1
CDS-3UTR GCA 90 bp ATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTAATGGTGTGGACTTCTCTTTCTGCTCCTCTAAATaGAAATTCTGTGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: ISSLLNLSQMVPNGVDFSFCSSK*KFCGKL
Trigger: CAGCTTTCCACAGAATTTGCATTTAGAGGAGCAGAA...AGAGAAGTCCACACCATTAGGGACCATCTGTGATAAATTCAGAAGGGAGGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp GCTTATTTATCTAAGCATACTTGGTATACGGCCTTTAGAAGGCAAAGTGTTTTGAATCTGCCATGTGACTaGCAGGAGTGGTCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: AYLSKHTWYTAFRRQSVLNLPCD*QEWSKC
Trigger: GCACTTTGACCACTCCTGGCAGTCACATGGCAGATT...CAAAACACTTTGCCTTCTAAAGGCCGTATACCAAGTATGCTTAGATAAATAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp TGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAGAACCACGATCTCTGCTAAATTCTaGTTGGGTGGGTGGAGGATT +
Preference number: 4 (lower is better)
Translates to: CIEKTANSSNVCATKRTTISAKF*LGGWRI
Trigger: AATCCTCCACCCACCCAAGCAGAATTTAGCAGAGAT...CGTGGTTCTCTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAATTGAACCTTGCTACTTaGTTTTTCATAACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: WYCDGSIHSTSCPFSAPQLNLAT*FFITAE
Trigger: CTCTGCTGTTATGAAAAACCAAGTAGCAAGGTTCAA...TTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCTCTGTCTGTGCCTTCTaGGTTCCCGAGGTCCATCTA +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGSVCAF*VPEVHL
Trigger: TAGATGGACCTCGGGAACCCAGAAGGCACAGACAGA...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TACTGTAACTTTAATTGCTCTGTGATAGGTAGCTACTTGGGGAGGATTTGTGAATGGATTAAAAGGACTTaGTGCAGAGTTCAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: YCNFNCSVIGSYLGRICEWIKRT*CRVQGG
Trigger: CCCTCCCTGAACTCTGCACCAAGTCCTTTTAATCCA...TTCACAAATCCTCCCCAAGTAGCTACCTATCACAGAGCAATTAAAGTTACAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR CCA 90 bp TGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAGAACCACGCTGACTCTGTCCTTGTaGATTAAAAGGACTTGGTGC +
Preference number: 4 (lower is better)
Translates to: CIEKTANSSNVCATKRTTLTLSL*IKRTWC
Trigger: GCACCAAGTCCTTTTAATCCACAAGGACAGAGTCAG...CGTGGTTCTCTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CTTTGCTTTGGTCTTGAAATCACAAATCAAACACATGACCCAGTGCAAATTAAGTCTGAAGCACCTGCCTaGCTCTTCTTACTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: LCFGLEITNQTHDPVQIKSEAPA*LFLLRV
Trigger: CACTCTCAGTAAGAAGAGCCAGGCAGGTGCTTCAGA...CTTAATTTGCACTGGGTCATGTGTTTGATTTGTGATTTCAAGACCAAAGCAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359524.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AATAGGATGCAGCTGGCACTGGCGGTAGCATTTTTATGTCAATTAATTAAAATTTGGATAGTGCATTCGTaGGTTGGAGAAGCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: NRMQLALAVAFLCQLIKIWIVHS*VGEAAL
Trigger: GAGAGCCGCTTCTCCAACCCACGAATGCACTATCCA...AATTTTAATTAATTGACATAAAAATGCTACCGCCAGTGCCAGCTGCATCCTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCTGGATAGTGCATTCGTaGGTTGGAGAAGCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGWIVHS*VGEAAL
Trigger: GAGAGCCGCTTCTCCAACCCACGAATGCACTATCCA...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TGCTATTTGCTTGAGAAACAAAGCCTTCCCTCCTCCCAAGTTGAAAGAAATAAAGCCATAGTAGAGATATaGAGTGCTGCTGGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: CYLLEKQSLPSSQVERNKAIVEI*SAAGLE
Trigger: TTCCAGACCAGCAGCACTCCATATCTCTACTATGGC...TTTATTTCTTTCAACTTGGGAGGAGGGAAGGCTTTGTTTCTCAAGCAAATAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR CCA 90 bp AATCATGACCTGTGGCACAAAGCGGAATTTTTACAATATGTGCATGGAAAGCAAGCCATAGTAGAGATATaGAGTGCTGCTGGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: NHDLWHKAEFLQYVHGKQAIVEI*SAAGLE
Trigger: TTCCAGACCAGCAGCACTCCATATCTCTACTATGGC...TTGCTTTCCATGCACATATTGTAAAAATTCCGCTTTGTGCCACAGGTCATGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCGTTGGGGAACTGCTGTaGCTTCCATCAGCGTCAACA +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGVGELL*LPSAST
Trigger: TGTTGACGCTGATGGAAGCCACAGCAGTTCCCCAAC...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp ATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTAATGGTGTGGACTTCTCTCTTTGCTATGAAGCCTaGCGATTTAGAGTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: ISSLLNLSQMVPNGVDFSLCYEA*RFRVLL
Trigger: AAGCAAAACTCTAAATCGCCAGGCTTCATAGCAAAG...AGAGAAGTCCACACCATTAGGGACCATCTGTGATAAATTCAGAAGGGAGGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CTTTGCTTTGGTCTTGAAATCACAAATCAAACACATGACCCAGTGCAAATTAAGTTCTGCTTGGGTGGGTaGAGGATTCCAATGAAGGGA +
Preference number: 4 (lower is better)
Translates to: LCFGLEITNQTHDPVQIKFCLGG*RIPMKG
Trigger: TCCCTTCATTGGAATCCTCCACCCACCCAAGCAGAA...CTTAATTTGCACTGGGTCATGTGTTTGATTTGTGATTTCAAGACCAAAGCAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCGTGAATTACCCCCATTaGGGTGGTTGGAGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGVNYPH*GGWSEG
Trigger: ACCCTCACTCCAACCACCCCAATGGGGGTAATTCAC...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp GCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCTGGAACTCTGATATaGGTTAAAATTTGTGAGACA +
Preference number: 4 (lower is better)
Translates to: ANASCFHVLTWILGQSLSSGTLI*VKICET
Trigger: TGTCTCACAAATTTTAACCCATATCAGAGTTCCAGA...GGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAGAACCACGTGGTCCCTAATGGTGTaGACTTCTCTGCTCATTTTG +
Preference number: 4 (lower is better)
Translates to: CIEKTANSSNVCATKRTTWSLMV*TSLLIL
Trigger: CAAAATGAGCAGAGAAGTCCACACCATTAGGGACCA...CGTGGTTCTCTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CTGAATGATGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACAATCATGACCTGTaGCACAAAGCGGAATTTTTA +
Preference number: 4 (lower is better)
Translates to: LNDGTVMEASILPHVPLVHNHDL*HKAEFL
Trigger: TAAAAATTCCGCTTTGTGCCACAGGTCATGATTGTG...CACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCATCATTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CTTTGCTTTGGTCTTGAAATCACAAATCAAACACATGACCCAGTGCAAATTAAGTTCTTGCTGTCCTCCTaGAGAAAGTTTGCACCGCAC +
Preference number: 4 (lower is better)
Translates to: LCFGLEITNQTHDPVQIKFLLSS*RKFAPH
Trigger: GTGCGGTGCAAACTTTCTCCAGGAGGACAGCAAGAA...CTTAATTTGCACTGGGTCATGTGTTTGATTTGTGATTTCAAGACCAAAGCAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371432.7
ENST00000647337.2
CDS-3UTR TCA 90 bp CTTTGCTTTGGTCTTGAAATCACAAATCAAACACATGACCCAGTGCAAATTAAGACTCTCATACTGGGATaGGGAATGCGCCCTAAATCA +
Preference number: 4 (lower is better)
Translates to: LCFGLEITNQTHDPVQIKTLILG*GMRPKS
Trigger: TGATTTAGGGCGCATTCCTCATCCCAGTATGAGAGT...CTTAATTTGCACTGGGTCATGTGTTTGATTTGTGATTTCAAGACCAAAGCAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CTTTGCTTTGGTCTTGAAATCACAAATCAAACACATGACCCAGTGCAAATTAAGCTGGGGTCTGTAATCTaGCTCTGTCCTTGTGGATTA +
Preference number: 4 (lower is better)
Translates to: LCFGLEITNQTHDPVQIKLGSVI*LCPCGL
Trigger: TAATCCACAAGGACAGAGTCAGATTACAGACCCCAG...CTTAATTTGCACTGGGTCATGTGTTTGATTTGTGATTTCAAGACCAAAGCAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp ACTTTTGCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCTATATATGTATATATTaGTACGTGTGGGATGTGGCC +
Preference number: 4 (lower is better)
Translates to: TFANASCFHVLTWILGQSYICIY*YVWDVA
Trigger: GGCCACATCCCACACGTATCAATATATACATATATA...GGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGCAAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp ATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTAATGGTGTGGACTTCTCTTGTGCCTGGATGAACTaGAATTGCTTAGCAATATTT +
Preference number: 4 (lower is better)
Translates to: ISSLLNLSQMVPNGVDFSCAWMN*NCLAIF
Trigger: AAATATTGCTAAGCAATTTCAGTTCATCCAGGCACA...AGAGAAGTCCACACCATTAGGGACCATCTGTGATAAATTCAGAAGGGAGGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCACTCATCCACAATCATaGCCTGTGGCACAAAGCGGA +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGTHPQS*PVAQSG
Trigger: TCCGCTTTGTGCCACAGGTCATGATTGTGGATGAGT...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCGCTGAAGAGGCTGTTTaGTGCCATAGTCCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGAEEAV*CHSPSF
Trigger: AAAGGAGGGACTATGGCATCAAACAGCCTCTTCAGC...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371432.7
ENST00000371438.5
ENST00000647337.2
CDS-3UTR GCA 90 bp CTGAATGATGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCAGATCGTTGAACCTTaGTACTTGGTTTTTCATAAC +
Preference number: 4 (lower is better)
Translates to: LNDGTVMEASILPHVPLVQIVEP*YLVFHN
Trigger: GTTATGAAAAACCAAGTAGCAAGGTTCAACGATCTG...CACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCATCATTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp AATAGGATGCAGCTGGCACTGGCGGTAGCATTTTTATGTCAATTAATTAAAATTAGTAGAGATATGGAGTaGTGCTGGTCTGGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: NRMQLALAVAFLCQLIKISRDME*CWSGRV
Trigger: GACCCTTCCAGACCAGCAGCACTCCATATCTCTACT...AATTTTAATTAATTGACATAAAAATGCTACCGCCAGTGCCAGCTGCATCCTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp AAATTAGAAAACCACATCACTCCAGCATTTCATGCTGATAAAGGGCTAAAGGTTTTGGATTTAATAGCGTaGTGCCATTCGAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: KLENHITPAFHADKGLKVLDLIA*CHSRWW
Trigger: CCACCACCTCGAATGGCAGCACGCTATTAAATCCAA...AACCTTTAGCCCTTTATCAGCATGAAATGCTGGAGTGATGTGGTTTTCTAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCAAACAGTTGGGGAACTaGTGTGGCTTCCATCAGCGT +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGKQLGN*CGFHQR
Trigger: ACGCTGATGGAAGCCACAGCAGTTCCCCAACTGTTT...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp GTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAACTGGTTTGTAGTAGTAAGACTTTaGTTTGGTCTTGAAATCACA +
Preference number: 4 (lower is better)
Translates to: VMEASILPHVPLVHLNWFVVVRL*FGLEIT
Trigger: TGTGATTTCAAGACCAAAGCAAAGTCTTACTACTAC...AAACCAGTTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCCACCTACTCTCATACTaGGATGAGGAATGCGCCCTA +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGHLLSY*DEECAL
Trigger: TAGGGCGCATTCCTCATCCCAGTATGAGAGTAGGTG...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AATCATGACCTGTGGCACAAAGCGGAATTTTTACAATATGTGCATGGAAAGCAACTGACTCTGTCCTTGTaGATTAAAAGGACTTGGTGC +
Preference number: 4 (lower is better)
Translates to: NHDLWHKAEFLQYVHGKQLTLSL*IKRTWC
Trigger: GCACCAAGTCCTTTTAATCCACAAGGACAGAGTCAG...TTGCTTTCCATGCACATATTGTAAAAATTCCGCTTTGTGCCACAGGTCATGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CTTTGCTTTGGTCTTGAAATCACAAATCAAACACATGACCCAGTGCAAATTAAGTTAGTGCACCTCAACTaGTTTTGTGAGCTGTCTGCG +
Preference number: 4 (lower is better)
Translates to: LCFGLEITNQTHDPVQIKLVHLN*FCELSA
Trigger: CGCAGACAGCTCACAAAACCAGTTGAGGTGCACTAA...CTTAATTTGCACTGGGTCATGTGTTTGATTTGTGATTTCAAGACCAAAGCAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TTGCTTGAGAAACAAAGCCTTCCCTCCTCCCAAGTTGAAAGAAATAAAGGAGTCCTTTGCTATGAAGCCTaGCGATTTAGAGTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: LLEKQSLPSSQVERNKGVLCYEA*RFRVLL
Trigger: AAGCAAAACTCTAAATCGCCAGGCTTCATAGCAAAG...GACTCCTTTATTTCTTTCAACTTGGGAGGAGGGAAGGCTTTGTTTCTCAAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR CCA 90 bp AATAGGATGCAGCTGGCACTGGCGGTAGCATTTTTATGTCAATTAATTAAAATTTTGGGTAAGGCAGATTaGGGTTCCCCTGTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: NRMQLALAVAFLCQLIKILGKAD*GSPVVL
Trigger: CAACACAACAGGGGAACCCCAATCTGCCTTACCCAA...AATTTTAATTAATTGACATAAAAATGCTACCGCCAGTGCCAGCTGCATCCTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CTGAATGATGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGTTATCTAAGCATACTTaGTATACGGCCTTTAGAAGG +
Preference number: 4 (lower is better)
Translates to: LNDGTVMEASILPHVPLVLSKHT*YTAFRR
Trigger: CCTTCTAAAGGCCGTATACCAAGTATGCTTAGATAA...CACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCATCATTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CTTGAGCCTTCTGCTTCTCAATATCTACCCTCTTATGGCTGCAAGATCATGACTACACTTACAAATAAATaGACAGTGGTGTGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: LEPSASQYLPSYGCKIMTTLTNK*TVVCFK
Trigger: CTTGAAGCACACCACTGTCCATTTATTTGTAAGTGT...AGTCATGATCTTGCAGCCATAAGAGGGTAGATATTGAGAAGCAGAAGGCTCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCCTTCTAAAGTGTTTCTaGGTTGCTGCCTGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGLLKCF*VAACSH
Trigger: GTGGCTGCAGGCAGCAACCCAGAAACACTTTAGAAG...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAGAACCACGCCAGGAACTAGTACATaGTTCCACAGTAGTAGTAAG +
Preference number: 4 (lower is better)
Translates to: CIEKTANSSNVCATKRTTPGTST*FHSSSK
Trigger: CTTACTACTACTGTGGAACCATGTACTAGTTCCTGG...CGTGGTTCTCTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AAATTAGAAAACCACATCACTCCAGCATTTCATGCTGATAAAGGGCTAAAGGTTATTTTGAAAGGGCTCTaGCAAGTGAGAGGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: KLENHITPAFHADKGLKVILKGL*QVRGSE
Trigger: CTCACTGCCTCTCACTTGCCAGAGCCCTTTCAAAAT...AACCTTTAGCCCTTTATCAGCATGAAATGCTGGAGTGATGTGGTTTTCTAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp GTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAACTGGTTTTTTACAATATGTGCATaGAAAGCAATTCTTGGGCAA +
Preference number: 4 (lower is better)
Translates to: VMEASILPHVPLVHLNWFFTICA*KAILGQ
Trigger: TTGCCCAAGAATTGCTTTCCATGCACATATTGTAAA...AAACCAGTTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCAC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAATTTACAATATGTGCATaGAAAGCAATTCTTGGGCAA +
Preference number: 4 (lower is better)
Translates to: WYCDGSIHSTSCPFSAPQFTICA*KAILGQ
Trigger: TTGCCCAAGAATTGCTTTCCATGCACATATTGTAAA...TTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp TGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAGAACCACGCAAATCTCAGATCGTTaGACCTTGCTACTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: CIEKTANSSNVCATKRTTQISDR*TLLLGF
Trigger: AAAACCAAGTAGCAAGGTTCAACGATCTGAGATTTG...CGTGGTTCTCTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCACTCTCATACTGGGATaGGGAATGCGCCCTAAATCA +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGTLILG*GMRPKS
Trigger: TGATTTAGGGCGCATTCCTCATCCCAGTATGAGAGT...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCCTGGGGTCTGTAATCTaGCTCTGTCCTTGTGGATTA +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGLGSVI*LCPCGL
Trigger: TAATCCACAAGGACAGAGTCAGATTACAGACCCCAG...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp AATAGGATGCAGCTGGCACTGGCGGTAGCATTTTTATGTCAATTAATTAAAATTCTGGGGTCTGTAATCTaGCTCTGTCCTTGTGGATTA +
Preference number: 4 (lower is better)
Translates to: NRMQLALAVAFLCQLIKILGSVI*LCPCGL
Trigger: TAATCCACAAGGACAGAGTCAGATTACAGACCCCAG...AATTTTAATTAATTGACATAAAAATGCTACCGCCAGTGCCAGCTGCATCCTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CTTTGCTTTGGTCTTGAAATCACAAATCAAACACATGACCCAGTGCAAATTAAGAAACTGATAGGATCCTaGCGAAGTGCCATAGTAGAG +
Preference number: 4 (lower is better)
Translates to: LCFGLEITNQTHDPVQIKKLIGS*RSAIVE
Trigger: CTCTACTATGGCACTTCGTCAGGATCCTATCAGTTT...CTTAATTTGCACTGGGTCATGTGTTTGATTTGTGATTTCAAGACCAAAGCAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp CTTGAGCCTTCTGCTTCTCAATATCTACCCTCTTATGGCTGCAAGATCATGACTTACTGTAACTTTAATTaGTCTGTGATAGGTAGCTAC +
Preference number: 4 (lower is better)
Translates to: LEPSASQYLPSYGCKIMTYCNFN*SVIGSY
Trigger: GTAGCTACCTATCACAGAGCAATTAAAGTTACAGTA...AGTCATGATCTTGCAGCCATAAGAGGGTAGATATTGAGAAGCAGAAGGCTCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp TCCTTAAAGCTGTACACACATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTACTGTAACTTTAATTaGTCTGTGATAGGTAGCTAC +
Preference number: 4 (lower is better)
Translates to: SLKLYTHLLPSEFITDGPYCNFN*SVIGSY
Trigger: GTAGCTACCTATCACAGAGCAATTAAAGTTACAGTA...GGGACCATCTGTGATAAATTCAGAAGGGAGGAGATGTGTGTACAGCTTTAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp GCTTATTTATCTAAGCATACTTGGTATACGGCCTTTAGAAGGCAAAGTGTTTTGAGGATCCTGACGAAGTaGCATAGTAGAGATATGGAG +
Preference number: 4 (lower is better)
Translates to: AYLSKHTWYTAFRRQSVLRILTK*HSRDME
Trigger: CTCCATATCTCTACTATGGCACTTCGTCAGGATCCT...CAAAACACTTTGCCTTCTAAAGGCCGTATACCAAGTATGCTTAGATAAATAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCTTGGATTTAATAGCGTaGTGCCATTCGAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGLDLIA*CHSRWW
Trigger: CCACCACCTCGAATGGCAGCACGCTATTAAATCCAA...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp AAATTAGAAAACCACATCACTCCAGCATTTCATGCTGATAAAGGGCTAAAGGTTTCTCTGGTGCAATTTTaGTCTCCTGTACTAGGTGTC +
Preference number: 4 (lower is better)
Translates to: KLENHITPAFHADKGLKVSLVQF*SPVLGV
Trigger: GACACCTAGTACAGGAGAGCAAAATTGCACCAGAGA...AACCTTTAGCCCTTTATCAGCATGAAATGCTGGAGTGATGTGGTTTTCTAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp CTTTGCTTTGGTCTTGAAATCACAAATCAAACACATGACCCAGTGCAAATTAAGTCTCTGGTGCAATTTTaGTCTCCTGTACTAGGTGTC +
Preference number: 4 (lower is better)
Translates to: LCFGLEITNQTHDPVQIKSLVQF*SPVLGV
Trigger: GACACCTAGTACAGGAGAGCAAAATTGCACCAGAGA...CTTAATTTGCACTGGGTCATGTGTTTGATTTGTGATTTCAAGACCAAAGCAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp TGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAGAACCACGGTTAAGAATCTCTGGTaGAATTTTGCTCTCCTGTAC +
Preference number: 4 (lower is better)
Translates to: CIEKTANSSNVCATKRTTVKNLW*NFALLY
Trigger: GTACAGGAGAGCAAAATTGCACCAGAGATTCTTAAC...CGTGGTTCTCTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp GCTTATTTATCTAAGCATACTTGGTATACGGCCTTTAGAAGGCAAAGTGTTTTGATCTCTGCTAAATTCTaGTTGGGTGGGTGGAGGATT +
Preference number: 4 (lower is better)
Translates to: AYLSKHTWYTAFRRQSVLISAKF*LGGWRI
Trigger: AATCCTCCACCCACCCAAGCAGAATTTAGCAGAGAT...CAAAACACTTTGCCTTCTAAAGGCCGTATACCAAGTATGCTTAGATAAATAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp GCTTATTTATCTAAGCATACTTGGTATACGGCCTTTAGAAGGCAAAGTGTTTTGAAATGGACAGTGGTGTaGTTCAAGCTACCACACACA +
Preference number: 4 (lower is better)
Translates to: AYLSKHTWYTAFRRQSVLKWTVV*FKLPHT
Trigger: TGTGTGTGGTAGCTTGAAGCACACCACTGTCCATTT...CAAAACACTTTGCCTTCTAAAGGCCGTATACCAAGTATGCTTAGATAAATAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp AAATGTGGCTGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGTTCCAGCAATGTTTGTaGTACAAAGAGAACCACGCT +
Preference number: 4 (lower is better)
Translates to: KCGCIEKTANSSNVCATKFQQCL*YKENHA
Trigger: AGCGTGGTTCTCTTTGTAGCACAAACATTGCTGGAA...CTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCAGCCACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp GCTTATTTATCTAAGCATACTTGGTATACGGCCTTTAGAAGGCAAAGTGTTTTGGTAAGTAAAGGTGGCTaGATAGTGCATTCGTGGGTT +
Preference number: 4 (lower is better)
Translates to: AYLSKHTWYTAFRRQSVLVSKGG*IVHSWV
Trigger: AACCCACGAATGCACTATCCAGCCACCTTTACTTAC...CAAAACACTTTGCCTTCTAAAGGCCGTATACCAAGTATGCTTAGATAAATAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AATAGGATGCAGCTGGCACTGGCGGTAGCATTTTTATGTCAATTAATTAAAATTTTAGTGCACCTCAACTaGTTTTGTGAGCTGTCTGCG +
Preference number: 4 (lower is better)
Translates to: NRMQLALAVAFLCQLIKILVHLN*FCELSA
Trigger: CGCAGACAGCTCACAAAACCAGTTGAGGTGCACTAA...AATTTTAATTAATTGACATAAAAATGCTACCGCCAGTGCCAGCTGCATCCTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TGCTATGAAGCCTGGCGATTTAGAGTTTTGCTTAACTATGAAACCACAGAACATTTTGGTAAGGCTGGTTaGTTAAGAATCTCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: CYEAWRFRVLLNYETTEHFGKAG*LRISGA
Trigger: TGCACCAGAGATTCTTAACCAACCAGCCTTACCAAA...ATGTTCTGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCAGGCTTCATAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TGCTATGAAGCCTGGCGATTTAGAGTTTTGCTTAACTATGAAACCACAGAACATCAAATAAATGGACAGTaGTGTGCTTCAAGCTACCAC +
Preference number: 4 (lower is better)
Translates to: CYEAWRFRVLLNYETTEHQINGQ*CASSYH
Trigger: GTGGTAGCTTGAAGCACACCACTGTCCATTTATTTG...ATGTTCTGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCAGGCTTCATAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TGCTATTTGCTTGAGAAACAAAGCCTTCCCTCCTCCCAAGTTGAAAGAAATAAACAAATAAATGGACAGTaGTGTGCTTCAAGCTACCAC +
Preference number: 4 (lower is better)
Translates to: CYLLEKQSLPSSQVERNKQINGQ*CASSYH
Trigger: GTGGTAGCTTGAAGCACACCACTGTCCATTTATTTG...TTTATTTCTTTCAACTTGGGAGGAGGGAAGGCTTTGTTTCTCAAGCAAATAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR CCA 90 bp AAATGTGGCTGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGCCAGGAACTAGTACATaGTTCCACAGTAGTAGTAAG +
Preference number: 4 (lower is better)
Translates to: KCGCIEKTANSSNVCATKPGTST*FHSSSK
Trigger: CTTACTACTACTGTGGAACCATGTACTAGTTCCTGG...CTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCAGCCACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp ACTTTTGCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCTCTGGAACTCTGATATaGGTTAAAATTTGTGAGACA +
Preference number: 4 (lower is better)
Translates to: TFANASCFHVLTWILGQSSGTLI*VKICET
Trigger: TGTCTCACAAATTTTAACCCATATCAGAGTTCCAGA...GGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGCAAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp GCTTATTTATCTAAGCATACTTGGTATACGGCCTTTAGAAGGCAAAGTGTTTTGTGGTCCCTAATGGTGTaGACTTCTCTGCTCATTTTG +
Preference number: 4 (lower is better)
Translates to: AYLSKHTWYTAFRRQSVLWSLMV*TSLLIL
Trigger: CAAAATGAGCAGAGAAGTCCACACCATTAGGGACCA...CAAAACACTTTGCCTTCTAAAGGCCGTATACCAAGTATGCTTAGATAAATAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CTTTGCTTTGGTCTTGAAATCACAAATCAAACACATGACCCAGTGCAAATTAAGTGGTCCCTAATGGTGTaGACTTCTCTGCTCATTTTG +
Preference number: 4 (lower is better)
Translates to: LCFGLEITNQTHDPVQIKWSLMV*TSLLIL
Trigger: CAAAATGAGCAGAGAAGTCCACACCATTAGGGACCA...CTTAATTTGCACTGGGTCATGTGTTTGATTTGTGATTTCAAGACCAAAGCAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp GCTTATTTATCTAAGCATACTTGGTATACGGCCTTTAGAAGGCAAAGTGTTTTGTTCCATGTATTAACCTaGATTCTGGGCCAGTCCCTT +
Preference number: 4 (lower is better)
Translates to: AYLSKHTWYTAFRRQSVLFHVLT*ILGQSL
Trigger: AAGGGACTGGCCCAGAATCCAGGTTAATACATGGAA...CAAAACACTTTGCCTTCTAAAGGCCGTATACCAAGTATGCTTAGATAAATAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CTGAATGATGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGATGGAAAGCAATTCTTaGGCAATAGCAATTGGAAAA +
Preference number: 4 (lower is better)
Translates to: LNDGTVMEASILPHVPLVMESNS*AIAIGK
Trigger: TTTTCCAATTGCTATTGCCCAAGAATTGCTTTCCAT...CACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCATCATTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CTTGAGCCTTCTGCTTCTCAATATCTACCCTCTTATGGCTGCAAGATCATGACTATGGAAAGCAATTCTTaGGCAATAGCAATTGGAAAA +
Preference number: 4 (lower is better)
Translates to: LEPSASQYLPSYGCKIMTMESNS*AIAIGK
Trigger: TTTTCCAATTGCTATTGCCCAAGAATTGCTTTCCAT...AGTCATGATCTTGCAGCCATAAGAGGGTAGATATTGAGAAGCAGAAGGCTCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR CAA 72 bp AGTAAACAATCTGAAGCTCGATTGCAATTGTCTCTCTaGAGCCTTCTGCTTCTCAATATCTACCCTCTTATG +
Preference number: 4 (lower is better)
Translates to: SKQSEARLQLSL*SLLLLNIYPLM
Trigger: CATAAGAGGGTAGATATTGAGAAGCAGAAGGCTCAAGAGAGACAATTGCAATCGAGCTTCAGATTGTTTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp AAATGTGGCTGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGCAAATCTCAGATCGTTaGACCTTGCTACTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: KCGCIEKTANSSNVCATKQISDR*TLLLGF
Trigger: AAAACCAAGTAGCAAGGTTCAACGATCTGAGATTTG...CTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCAGCCACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCCAAAAGAAGTTTTGCTaGCATGGTGTCACTGTGCTG +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGQKKFC*HGVTVL
Trigger: CAGCACAGTGACACCATGTCAGCAAAACTTCTTTTG...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000647337.2
CDS-3UTR GCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCAGGATCCTGACGAAGTaGCATAGTAGAGATATGGAG +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGRILTK*HSRDME
Trigger: CTCCATATCTCTACTATGGCACTTCGTCAGGATCCT...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp AATAGGATGCAGCTGGCACTGGCGGTAGCATTTTTATGTCAATTAATTAAAATTTCTCTGGTGCAATTTTaGTCTCCTGTACTAGGTGTC +
Preference number: 4 (lower is better)
Translates to: NRMQLALAVAFLCQLIKISLVQF*SPVLGV
Trigger: GACACCTAGTACAGGAGAGCAAAATTGCACCAGAGA...AATTTTAATTAATTGACATAAAAATGCTACCGCCAGTGCCAGCTGCATCCTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCAAATGGACAGTGGTGTaGTTCAAGCTACCACACACA +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGKWTVV*FKLPHT
Trigger: TGTGTGTGGTAGCTTGAAGCACACCACTGTCCATTT...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp CTTTGCTTTGGTCTTGAAATCACAAATCAAACACATGACCCAGTGCAAATTAAGTTCCAGCAATGTTTGTaGTACAAAGAGAACCACGCT +
Preference number: 4 (lower is better)
Translates to: LCFGLEITNQTHDPVQIKFQQCL*YKENHA
Trigger: AGCGTGGTTCTCTTTGTAGCACAAACATTGCTGGAA...CTTAATTTGCACTGGGTCATGTGTTTGATTTGTGATTTCAAGACCAAAGCAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp AAATTAGAAAACCACATCACTCCAGCATTTCATGCTGATAAAGGGCTAAAGGTTTTCCAGCAATGTTTGTaGTACAAAGAGAACCACGCT +
Preference number: 4 (lower is better)
Translates to: KLENHITPAFHADKGLKVFQQCL*YKENHA
Trigger: AGCGTGGTTCTCTTTGTAGCACAAACATTGCTGGAA...AACCTTTAGCCCTTTATCAGCATGAAATGCTGGAGTGATGTGGTTTTCTAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCGTAAGTAAAGGTGGCTaGATAGTGCATTCGTGGGTT +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGVSKGG*IVHSWV
Trigger: AACCCACGAATGCACTATCCAGCCACCTTTACTTAC...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAGAACCACGACACTTACAAATAAATaGACAGTGGTGTGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: CIEKTANSSNVCATKRTTTLTNK*TVVCFK
Trigger: CTTGAAGCACACCACTGTCCATTTATTTGTAAGTGT...CGTGGTTCTCTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAGAACCACGGTGAGACAACTGAAATaGATAAAAATGTGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: CIEKTANSSNVCATKRTTVRQLK*IKMWLH
Trigger: ATGCAGCCACATTTTTATCCATTTCAGTTGTCTCAC...CGTGGTTCTCTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CTTTGCTTTGGTCTTGAAATCACAAATCAAACACATGACCCAGTGCAAATTAAGCTAAAACCAAAGCTGTaGTACCTGTTCTGGAACTCT +
Preference number: 4 (lower is better)
Translates to: LCFGLEITNQTHDPVQIKLKPKL*YLFWNS
Trigger: AGAGTTCCAGAACAGGTACCACAGCTTTGGTTTTAG...CTTAATTTGCACTGGGTCATGTGTTTGATTTGTGATTTCAAGACCAAAGCAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCTTCCATGTATTAACCTaGATTCTGGGCCAGTCCCTT +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGFHVLT*ILGQSL
Trigger: AAGGGACTGGCCCAGAATCCAGGTTAATACATGGAA...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AAATGTGGCTGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGCACAATCATGACCTGTaGCACAAAGCGGAATTTTTA +
Preference number: 4 (lower is better)
Translates to: KCGCIEKTANSSNVCATKHNHDL*HKAEFL
Trigger: TAAAAATTCCGCTTTGTGCCACAGGTCATGATTGTG...CTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCAGCCACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR CAA 72 bp ATACATATATATGCACTCTCTCTATATATGTATATATaGATACGTGTGGGATGTGGCCCCCAGATACCACTG +
Preference number: 4 (lower is better)
Translates to: IHIYALSLYMYI*IRVGCGPQIPL
Trigger: CAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp AATCATGACCTGTGGCACAAAGCGGAATTTTTACAATATGTGCATGGAAAGCAATGTGCCTGGATGAACTaGAATTGCTTAGCAATATTT +
Preference number: 4 (lower is better)
Translates to: NHDLWHKAEFLQYVHGKQCAWMN*NCLAIF
Trigger: AAATATTGCTAAGCAATTTCAGTTCATCCAGGCACA...TTGCTTTCCATGCACATATTGTAAAAATTCCGCTTTGTGCCACAGGTCATGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp AATCATGACCTGTGGCACAAAGCGGAATTTTTACAATATGTGCATGGAAAGCAAAGAAATAAAGGAGTCTaGACTAATCAAAACCCGCAA +
Preference number: 4 (lower is better)
Translates to: NHDLWHKAEFLQYVHGKQRNKGV*TNQNPQ
Trigger: TTGCGGGTTTTGATTAGTTCAGACTCCTTTATTTCT...TTGCTTTCCATGCACATATTGTAAAAATTCCGCTTTGTGCCACAGGTCATGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR GCA 90 bp AATCATGACCTGTGGCACAAAGCGGAATTTTTACAATATGTGCATGGAAAGCAACAGATCGTTGAACCTTaGTACTTGGTTTTTCATAAC +
Preference number: 4 (lower is better)
Translates to: NHDLWHKAEFLQYVHGKQQIVEP*YLVFHN
Trigger: GTTATGAAAAACCAAGTAGCAAGGTTCAACGATCTG...TTGCTTTCCATGCACATATTGTAAAAATTCCGCTTTGTGCCACAGGTCATGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp AAATTAGAAAACCACATCACTCCAGCATTTCATGCTGATAAAGGGCTAAAGGTTTTCTGCTCCTCTAAATaGAAATTCTGTGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: KLENHITPAFHADKGLKVFCSSK*KFCGKL
Trigger: CAGCTTTCCACAGAATTTGCATTTAGAGGAGCAGAA...AACCTTTAGCCCTTTATCAGCATGAAATGCTGGAGTGATGTGGTTTTCTAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp CTTTGCTTTGGTCTTGAAATCACAAATCAAACACATGACCCAGTGCAAATTAAGTTCTGCTCCTCTAAATaGAAATTCTGTGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: LCFGLEITNQTHDPVQIKFCSSK*KFCGKL
Trigger: CAGCTTTCCACAGAATTTGCATTTAGAGGAGCAGAA...CTTAATTTGCACTGGGTCATGTGTTTGATTTGTGATTTCAAGACCAAAGCAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AAATGTGGCTGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGACACTTACAAATAAATaGACAGTGGTGTGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: KCGCIEKTANSSNVCATKTLTNK*TVVCFK
Trigger: CTTGAAGCACACCACTGTCCATTTATTTGTAAGTGT...CTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCAGCCACATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CTTTGCTTTGGTCTTGAAATCACAAATCAAACACATGACCCAGTGCAAATTAAGTATATATGTATATATTaGTACGTGTGGGATGTGGCC +
Preference number: 4 (lower is better)
Translates to: LCFGLEITNQTHDPVQIKYICIY*YVWDVA
Trigger: GGCCACATCCCACACGTATCAATATATACATATATA...CTTAATTTGCACTGGGTCATGTGTTTGATTTGTGATTTCAAGACCAAAGCAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp TGCTATTTGCTTGAGAAACAAAGCCTTCCCTCCTCCCAAGTTGAAAGAAATAAATACTGTAACTTTAATTaGTCTGTGATAGGTAGCTAC +
Preference number: 4 (lower is better)
Translates to: CYLLEKQSLPSSQVERNKYCNFN*SVIGSY
Trigger: GTAGCTACCTATCACAGAGCAATTAAAGTTACAGTA...TTTATTTCTTTCAACTTGGGAGGAGGGAAGGCTTTGTTTCTCAAGCAAATAGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000646519.1
CDS-3UTR GCA 90 bp AATAGGATGCAGCTGGCACTGGCGGTAGCATTTTTATGTCAATTAATTAAAATTTTCTGCTCCTCTAAATaGAAATTCTGTGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: NRMQLALAVAFLCQLIKIFCSSK*KFCGKL
Trigger: CAGCTTTCCACAGAATTTGCATTTAGAGGAGCAGAA...AATTTTAATTAATTGACATAAAAATGCTACCGCCAGTGCCAGCTGCATCCTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCTTCTGCTCCTCTAAATaGAAATTCTGTGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGFCSSK*KFCGKL
Trigger: CAGCTTTCCACAGAATTTGCATTTAGAGGAGCAGAA...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp AAATTAGAAAACCACATCACTCCAGCATTTCATGCTGATAAAGGGCTAAAGGTTTTTGGATTAAGGATTTaGACTTGGAAATCTGCCATG +
Preference number: 4 (lower is better)
Translates to: KLENHITPAFHADKGLKVFGLRI*TWKSAM
Trigger: CATGGCAGATTTCCAAGTGCAAATCCTTAATCCAAA...AACCTTTAGCCCTTTATCAGCATGAAATGCTGGAGTGATGTGGTTTTCTAATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp AAATGTGGCTGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGGTAGTAGTAAGACTTTaGTTTGGTCTTGAAATCACA +
Preference number: 4 (lower is better)
Translates to: KCGCIEKTANSSNVCATKVVVRL*FGLEIT
Trigger: TGTGATTTCAAGACCAAAGCAAAGTCTTACTACTAC...CTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCAGCCACATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CTTTGCTTTGGTCTTGAAATCACAAATCAAACACATGACCCAGTGCAAATTAAGTTGAACCTTGCTACTTaGTTTTTCATAACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: LCFGLEITNQTHDPVQIKLNLAT*FFITAE
Trigger: CTCTGCTGTTATGAAAAACCAAGTAGCAAGGTTCAA...CTTAATTTGCACTGGGTCATGTGTTTGATTTGTGATTTCAAGACCAAAGCAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp GCTTATTTATCTAAGCATACTTGGTATACGGCCTTTAGAAGGCAAAGTGTTTTGTTGAACCTTGCTACTTaGTTTTTCATAACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: AYLSKHTWYTAFRRQSVLLNLAT*FFITAE
Trigger: CTCTGCTGTTATGAAAAACCAAGTAGCAAGGTTCAA...CAAAACACTTTGCCTTCTAAAGGCCGTATACCAAGTATGCTTAGATAAATAAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCCTTTGCTATGAAGCCTaGCGATTTAGAGTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGLCYEA*RFRVLL
Trigger: AAGCAAAACTCTAAATCGCCAGGCTTCATAGCAAAG...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TGCTATGAAGCCTGGCGATTTAGAGTTTTGCTTAACTATGAAACCACAGAACATTCTGGAACTCTGATATaGGTTAAAATTTGTGAGACA +
Preference number: 4 (lower is better)
Translates to: CYEAWRFRVLLNYETTEHSGTLI*VKICET
Trigger: TGTCTCACAAATTTTAACCCATATCAGAGTTCCAGA...ATGTTCTGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCAGGCTTCATAGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp TGCTATGAAGCCTGGCGATTTAGAGTTTTGCTTAACTATGAAACCACAGAACATATGGAAAGCAATTCTTaGGCAATAGCAATTGGAAAA +
Preference number: 4 (lower is better)
Translates to: CYEAWRFRVLLNYETTEHMESNS*AIAIGK
Trigger: TTTTCCAATTGCTATTGCCCAAGAATTGCTTTCCAT...ATGTTCTGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCAGGCTTCATAGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCTATATATGTATATATTaGTACGTGTGGGATGTGGCC +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGYICIY*YVWDVA
Trigger: GGCCACATCCCACACGTATCAATATATACATATATA...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR TCA 90 bp AATAGGATGCAGCTGGCACTGGCGGTAGCATTTTTATGTCAATTAATTAAAATTTGTGCCTGGATGAACTaGAATTGCTTAGCAATATTT +
Preference number: 4 (lower is better)
Translates to: NRMQLALAVAFLCQLIKICAWMN*NCLAIF
Trigger: AAATATTGCTAAGCAATTTCAGTTCATCCAGGCACA...AATTTTAATTAATTGACATAAAAATGCTACCGCCAGTGCCAGCTGCATCCTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCCAGATCGTTGAACCTTaGTACTTGGTTTTTCATAAC +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGQIVEP*YLVFHN
Trigger: GTTATGAAAAACCAAGTAGCAAGGTTCAACGATCTG...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCTTTGGATTAAGGATTTaGACTTGGAAATCTGCCATG +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGFGLRI*TWKSAM
Trigger: CATGGCAGATTTCCAAGTGCAAATCCTTAATCCAAA...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCTTGAACCTTGCTACTTaGTTTTTCATAACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGLNLAT*FFITAE
Trigger: CTCTGCTGTTATGAAAAACCAAGTAGCAAGGTTCAA...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AATAGGATGCAGCTGGCACTGGCGGTAGCATTTTTATGTCAATTAATTAAAATTTTATCTAAGCATACTTaGTATACGGCCTTTAGAAGG +
Preference number: 4 (lower is better)
Translates to: NRMQLALAVAFLCQLIKILSKHT*YTAFRR
Trigger: CCTTCTAAAGGCCGTATACCAAGTATGCTTAGATAA...AATTTTAATTAATTGACATAAAAATGCTACCGCCAGTGCCAGCTGCATCCTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AAATTAGAAAACCACATCACTCCAGCATTTCATGCTGATAAAGGGCTAAAGGTTTCTGGAACTCTGATATaGGTTAAAATTTGTGAGACA +
Preference number: 4 (lower is better)
Translates to: KLENHITPAFHADKGLKVSGTLI*VKICET
Trigger: TGTCTCACAAATTTTAACCCATATCAGAGTTCCAGA...AACCTTTAGCCCTTTATCAGCATGAAATGCTGGAGTGATGTGGTTTTCTAATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AAATTAGAAAACCACATCACTCCAGCATTTCATGCTGATAAAGGGCTAAAGGTTATGGAAAGCAATTCTTaGGCAATAGCAATTGGAAAA +
Preference number: 4 (lower is better)
Translates to: KLENHITPAFHADKGLKVMESNS*AIAIGK
Trigger: TTTTCCAATTGCTATTGCCCAAGAATTGCTTTCCAT...AACCTTTAGCCCTTTATCAGCATGAAATGCTGGAGTGATGTGGTTTTCTAATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CCA 90 bp AAATTAGAAAACCACATCACTCCAGCATTTCATGCTGATAAAGGGCTAAAGGTTTTTACAATATGTGCATaGAAAGCAATTCTTGGGCAA +
Preference number: 4 (lower is better)
Translates to: KLENHITPAFHADKGLKVFTICA*KAILGQ
Trigger: TTGCCCAAGAATTGCTTTCCATGCACATATTGTAAA...AACCTTTAGCCCTTTATCAGCATGAAATGCTGGAGTGATGTGGTTTTCTAATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR CAA 72 bp AAGTACATCTTAAATAGTAAACAATCTGAAGCTCGATaGCAATTGTCTCTCTTGAGCCTTCTGCTTCTCAAT +
Preference number: 4 (lower is better)
Translates to: KYILNSKQSEAR*QLSLLSLLLLN
Trigger: ATTGAGAAGCAGAAGGCTCAAGAGAGACAATTGCAATCGAGCTTCAGATTGTTTACTATTTAAGATGTACTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
3UTR CAA 72 bp GAGTCCACCTCTCTGAATTGGCATATGAACAGGTTATaGATGATAACAGACCAAACAACAAAAACAAAAATA +
Preference number: 4 (lower is better)
Translates to: ESTSLNWHMNRL*MITDQTTKTKI
Trigger: TATTTTTGTTTTTGTTGTTTGGTCTGTTATCATCAATAACCTGTTCATATGCCAATTCAGAGAGGTGGACTC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCTACTGTAACTTTAATTaGTCTGTGATAGGTAGCTAC +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGYCNFN*SVIGSY
Trigger: GTAGCTACCTATCACAGAGCAATTAAAGTTACAGTA...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR GCA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCGTAGTAGTAAGACTTTaGTTTGGTCTTGAAATCACA +
Preference number: 4 (lower is better)
Translates to: HIYALSLYMYILIRVGCGVVVRL*FGLEIT
Trigger: TGTGATTTCAAGACCAAAGCAAAGTCTTACTACTAC...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp GGGGCGGCGGGGATGTACCCGCGTCCACGGTGCCCTCCTCCCTGCCCGCAGTGCGGCGGCGGCCGCTCCTaGTCATCCCCGCGTGTGCTG +
Preference number: 5 (lower is better)
Translates to: GAAGMYPRPRCPPPCPQCGGGRS*SSPRVL
Trigger: CAGCACACGCGGGGATGACAAGGAGCGGCCGCCGCC...GCACTGCGGGCAGGGAGGAGGGCACCGTGGACGCGGGTACATCCCCGCCGCCCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CAA 90 bp GACAGGCAGGGATGCCTGGTGCAAGCGATCCCTCGGCCCCGGGGCGGCCCAGCCCCGAGGGCTACCACCTaGAAGGCCACGGGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: DRQGCLVQAIPRPRGGPAPRATT*KATGRV
Trigger: GACCCTGCCCGTGGCCTTCAAGGTGGTAGCCCTCGG...GGCTGGGCCGCCCCGGGGCCGAGGGATCGCTTGCACCAGGCATCCCTGCCTGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
CDS-3UTR CAA 90 bp GGCGGCGGGGATGTACCCGCGTCCACGGTGCCCTCCTCCCTGCCCGCAGTGCTGCTGTTGCTGCTGCTGTaGCGCAGCCACCACCGGGCT +
Preference number: 5 (lower is better)
Translates to: GGGDVPASTVPSSLPAVLLLLLL*RSHHRA
Trigger: AGCCCGGTGGTGGCTGCGCAACAGCAGCAGCAACAG...CAGCACTGCGGGCAGGGAGGAGGGCACCGTGGACGCGGGTACATCCCCGCCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CAA 90 bp CTCGGGGCGGCGGGGATGTACCCGCGTCCACGGTGCCCTCCTCCCTGCCCGCAGTCTTTGCCGGAGTCTTaGGAACACCCGGGGTGGCAG +
Preference number: 5 (lower is better)
Translates to: LGAAGMYPRPRCPPPCPQSLPES*EHPGWQ
Trigger: CTGCCACCCCGGGTGTTCCAAAGACTCCGGCAAAGA...CTGCGGGCAGGGAGGAGGGCACCGTGGACGCGGGTACATCCCCGCCGCCCCGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CAA 90 bp CTAGGGCCGTGCTTTCCGCTAGGCAGCTGCGCAGAGCAACCGCTCCTCCGCTGGTCCACCATGGTGCGGTaGTCGTGGGGCGGCCGCAAC +
Preference number: 5 (lower is better)
Translates to: LGPCFPLGSCAEQPLLRWSTMVR*SWGGRN
Trigger: GTTGCGGCCGCCCCACGACAACCGCACCATGGTGGA...CCAGCGGAGGAGCGGTTGCTCTGCGCAGCTGCCTAGCGGAAAGCACGGCCCTAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
CDS-3UTR CAA 90 bp TGCTTTCCGCTAGGCAGCTGCGCAGAGCAACCGCTCCTCCGCTGGGCGCGCTTCCCGAGGGCTACCACCTaGAAGGCCACGGGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: CFPLGSCAEQPLLRWARFPRATT*KATGRV
Trigger: GACCCTGCCCGTGGCCTTCAAGGTGGTAGCCCTCGG...GAAGCGCGCCCAGCGGAGGAGCGGTTGCTCTGCGCAGCTGCCTAGCGGAAAGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
CDS-3UTR CAA 90 bp TTCGCTGCTGGGGAGGGACAGGCAGGGATGCCTGGTGCAAGCGATCCCTCGGCCCTGTTGCTGCTGCTGTaGCGCAGCCACCACCGGGCT +
Preference number: 5 (lower is better)
Translates to: FAAGEGQAGMPGASDPSALLLLL*RSHHRA
Trigger: AGCCCGGTGGTGGCTGCGCAACAGCAGCAGCAACAG...GGCCGAGGGATCGCTTGCACCAGGCATCCCTGCCTGTCCCTCCCCAGCAGCGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
CDS-3UTR CAA 90 bp GGCCCGCGCTATGCTGTCCAGGTGGCCGTTCATGGTCCGCAGCTCCACCAGGATTCCACCATGGTGCGGTaGTCGTGGGGCGGCCGCAAC +
Preference number: 5 (lower is better)
Translates to: GPRYAVQVAVHGPQLHQDSTMVR*SWGGRN
Trigger: GTTGCGGCCGCCCCACGACAACCGCACCATGGTGGA...ATCCTGGTGGAGCTGCGGACCATGAACGGCCACCTGGACAGCATAGCGCGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CAA 90 bp CTAGGCAGCTGCGCAGAGCAACCGCTCCTCCGCTGGGCGCGCTTCGCTGCTGGGGCGGGGGACTTGAGTTaGCAGCTTGGAATGGGGTCC +
Preference number: 5 (lower is better)
Translates to: LGSCAEQPLLRWARFAAGAGDLS*QLGMGS
Trigger: GGACCCCATTCCAAGCTGCAAACTCAAGTCCCCCGC...CCCAGCAGCGAAGCGCGCCCAGCGGAGGAGCGGTTGCTCTGCGCAGCTGCCTAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CAA 90 bp GGGAGGGACAGGCAGGGATGCCTGGTGCAAGCGATCCCTCGGCCCCGGGGCGGCGGTGAGAAATCAAGTTaGATGAGGCCGACTGCCGGG +
Preference number: 5 (lower is better)
Translates to: GRDRQGCLVQAIPRPRGGGEKSS*MRPTAG
Trigger: CCCGGCAGTCGGCCTCATCAAACTTGATTTCTCACC...GCCGCCCCGGGGCCGAGGGATCGCTTGCACCAGGCATCCCTGCCTGTCCCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS GCA 90 bp GCCGCCGCCTCCTGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTGCTaGTGTTGCTGCTGCTGCTGTTGCTGCTGCTGTTGCGCAGCCACC +
Preference number: 5 (lower is better)
Translates to: AAASCCCCCCCCCCC*CCCCCCCCCCCAAT
Trigger: GGTGGCTGCGCAACAGCAGCAGCAACAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGGAGGCGGCGGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000478660.6
ENST00000576263.5
ENST00000625924.1
ENST00000646519.1
ENST00000647337.2
CDS CCA 90 bp GAGTCTGATGGGCCAACAGAGTCTGGCGATGCGGCGCAGTCGGGCTaGCGGGTAGGGAGACCCGGGAGGCGCAGATCTTTGCCGGAGTCT +
Preference number: 5 (lower is better)
Translates to: ESDGPTESGDAAQSG*RVGRPGRRRSLPES
Trigger: AGACTCCGGCAAAGATCTGCGCCTCCCGGGTCTCCCTACCCGCCAGCCCGACTGCGCCGCATCGCCAGACTCTGTTGGCCCATCAGACTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000646519.1
CDS-3UTR CAA 90 bp TCGGGGCGGCGGGGATGTACCCGCGTCCACGGTGCCCTCCTCCCTGCCCGCAGTTGGTGGAGCTTCAGCTaGTCAGTGATGCAACTCAGC +
Preference number: 5 (lower is better)
Translates to: SGRRGCTRVHGALLPARSWWSFS*SVMQLS
Trigger: GCTGAGTTGCATCACTGACAAGCTGAAGCTCCACCA...ACTGCGGGCAGGGAGGAGGGCACCGTGGACGCGGGTACATCCCCGCCGCCCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS GCA 90 bp TGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTGTTGCTGCTGCTGTTaGGCAGCCACCACCGGGCTCACGTCGCTCATTTTGCCGGGCTGC +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*AATTGLTSLILPGC
Trigger: GCAGCCCGGCAAAATGAGCGACGTGAGCCCGGTGGTGGCTGCGCAACAGCAGCAGCAACAGCAGCAGCAGCAACAGCAGCAGCAGCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000478660.6
ENST00000576263.5
ENST00000625924.1
ENST00000646519.1
ENST00000647337.2
CDS GCA 90 bp TGCTGCTGCTGCTGTTGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTaGTGTTGCTGCTGCTGTTGCGCAGCCACCACCGGGCTCACGTCG +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*CCCCCCAATTGLTS
Trigger: CGACGTGAGCCCGGTGGTGGCTGCGCAACAGCAGCAGCAACAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000478660.6
ENST00000576263.5
ENST00000625924.1
ENST00000646519.1
ENST00000647337.2
CDS GCA 90 bp TGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTGCTGCTGTTGCTGCTaGTGCTGTTGCTGCTGCTGTTGCGCAGCCACCACCGGGCTCACG +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*CCCCCCCAATTGLT
Trigger: CGTGAGCCCGGTGGTGGCTGCGCAACAGCAGCAGCAACAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000478660.6
ENST00000576263.5
ENST00000625924.1
ENST00000646519.1
ENST00000647337.2
CDS GCA 90 bp TCCTGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTGCTGCTGTTGCTaGTGCTGCTGTTGCTGCTGCTGTTGCGCAGCCACCACCGGGCTC +
Preference number: 5 (lower is better)
Translates to: SCCCCCCCCCCCCCC*CCCCCCCCAATTGL
Trigger: GAGCCCGGTGGTGGCTGCGCAACAGCAGCAGCAACAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000478660.6
ENST00000576263.5
ENST00000625924.1
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp CCCGCGCTATGCTGTCCAGGTGGCCGTTCATGGTCCGCAGCTCCACCAGGATGTCTCACGTCGCTCATTTaGCCGGGCTGCAGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: PALCCPGGRSWSAAPPGCLTSLI*PGCRLL
Trigger: CAGCAGCCTGCAGCCCGGCAAAATGAGCGACGTGAG...ACATCCTGGTGGAGCTGCGGACCATGAACGGCCACCTGGACAGCATAGCGCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CAA 90 bp GGGAGGGACAGGCAGGGATGCCTGGTGCAAGCGATCCCTCGGCCCCGGGGCGGCGCCCTTTCCTGCTATTaGCTTGAGAAACAAAGCCTT +
Preference number: 5 (lower is better)
Translates to: GRDRQGCLVQAIPRPRGGALSCY*LEKQSL
Trigger: AAGGCTTTGTTTCTCAAGCAAATAGCAGGAAAGGGC...GCCGCCCCGGGGCCGAGGGATCGCTTGCACCAGGCATCCCTGCCTGTCCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CAA 90 bp AAGAGTGTTTCTCTAAGCATCCTTCGCAGGGTGCCACCGCCGTTTCCAGGCACTGGCGGCGGCCGCTCCTaGTCATCCCCGCGTGTGCTG +
Preference number: 5 (lower is better)
Translates to: KSVSLSILRRVPPPFPGTGGGRS*SSPRVL
Trigger: CAGCACACGCGGGGATGACAAGGAGCGGCCGCCGCC...AGTGCCTGGAAACGGCGGTGGCACCCTGCGAAGGATGCTTAGAGAAACACTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS GCA 90 bp TGTTGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTGTTGCTGCTaGTGTTGCGCAGCCACCACCGGGCTCACGTCGCTCATTTTGCCG +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*CCAATTGLTSLILP
Trigger: CGGCAAAATGAGCGACGTGAGCCCGGTGGTGGCTGCGCAACAGCAGCAGCAACAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000478660.6
ENST00000576263.5
ENST00000625924.1
ENST00000646519.1
ENST00000647337.2
CDS GCA 90 bp TGCTGCTGTTGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTGTTaGTGCTGCTGTTGCGCAGCCACCACCGGGCTCACGTCGCTCATT +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*CCCCAATTGLTSLI
Trigger: AATGAGCGACGTGAGCCCGGTGGTGGCTGCGCAACAGCAGCAGCAACAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAACAGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000478660.6
ENST00000576263.5
ENST00000625924.1
ENST00000646519.1
ENST00000647337.2
CDS CCA 90 bp GGGCGGCGGTGGAGGGGCCTGGCTCCTCCGAGGAGAGGAACAAGGTaGTCGAAGACTGGGAGTCCAAGGTACTGGGCTCTGAATCTGAAA +
Preference number: 5 (lower is better)
Translates to: GRRWRGLAPPRRGTR*SKTGSPRYWALNLK
Trigger: TTTCAGATTCAGAGCCCAGTACCTTGGACTCCCAGTCTTCGACCACCTTGTTCCTCTCCTCGGAGGAGCCAGGCCCCTCCACCGCCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS GCA 90 bp TGCTGTTGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTGTTGCTaGTGCTGTTGCGCAGCCACCACCGGGCTCACGTCGCTCATTTTG +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*CCCAATTGLTSLIL
Trigger: CAAAATGAGCGACGTGAGCCCGGTGGTGGCTGCGCAACAGCAGCAGCAACAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAACAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000478660.6
ENST00000576263.5
ENST00000625924.1
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp CCCAGTTCTGAAGCACCTGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGCTGTTGCTGCTGCTGTaGCGCAGCCACCACCGGGCT +
Preference number: 5 (lower is better)
Translates to: PSSEAPAWLFLLRVEGQRLLLLL*RSHHRA
Trigger: AGCCCGGTGGTGGCTGCGCAACAGCAGCAGCAACAG...CCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCAGGTGCTTCAGAACTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR CAA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGTCCACCATGGTGCGGTaGTCGTGGGGCGGCCGCAAC +
Preference number: 5 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLRSTMVR*SWGGRN
Trigger: GTTGCGGCCGCCCCACGACAACCGCACCATGGTGGA...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp CCCAGTTCTGAAGCACCTGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGGGGTCCACTCTGGCTTaGGGAAGAGCCGGGGTAGGG +
Preference number: 5 (lower is better)
Translates to: PSSEAPAWLFLLRVEGQRGSTLA*GRAGVG
Trigger: CCCTACCCCGGCTCTTCCCAAAGCCAGAGTGGACCC...CCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCAGGTGCTTCAGAACTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000483377.5
ENST00000646519.1
CDS CCA 90 bp GAGGGGCCTGGCTCCTCCGAGGAGAGGAACAAGGTGGTCGAAGACTaGGAGTCCAAGGTACTGGGCTCTGAATCTGAAATGCGCCTAGGC +
Preference number: 5 (lower is better)
Translates to: EGPGSSEERNKVVED*ESKVLGSESEMRLG
Trigger: GCCTAGGCGCATTTCAGATTCAGAGCCCAGTACCTTGGACTCCCAGTCTTCGACCACCTTGTTCCTCTCCTCGGAGGAGCCAGGCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR CAA 90 bp GTAGAGATATGGAGTGCTGCTGGTCTGGAAGGGTCCACTCTGGCTTTGGGAAGATCCACCATGGTGCGGTaGTCGTGGGGCGGCCGCAAC +
Preference number: 5 (lower is better)
Translates to: VEIWSAAGLEGSTLALGRSTMVR*SWGGRN
Trigger: GTTGCGGCCGCCCCACGACAACCGCACCATGGTGGA...TCTTCCCAAAGCCAGAGTGGACCCTTCCAGACCAGCAGCACTCCATATCTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR CAA 90 bp CCCGCGTGTGCTGGGAGAGATGGTCGAAGGGCAACCGGGGAGCCAGTCGACCAGGTGATAGGTAGCTACTaGGGGAGGATTTGTGAAGAC +
Preference number: 5 (lower is better)
Translates to: PACAGRDGRRATGEPVDQVIGSY*GRICED
Trigger: GTCTTCACAAATCCTCCCCAAGTAGCTACCTATCAC...CTGGTCGACTGGCTCCCCGGTTGCCCTTCGACCATCTCTCCCAGCACACGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CAA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATGGGTCCACTCTGGCTTaGGGAAGAGCCGGGGTAGGG +
Preference number: 5 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNGSTLA*GRAGVG
Trigger: CCCTACCCCGGCTCTTCCCAAAGCCAGAGTGGACCC...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp CTAGGCAGCTGCGCAGAGCAACCGCTCCTCCGCTGGGCGCGCTTCGCTGCTGGGACAAATCTCAGATCGTaGAACCTTGCTACTTGGTTT +
Preference number: 5 (lower is better)
Translates to: LGSCAEQPLLRWARFAAGTNLRS*NLATWF
Trigger: AAACCAAGTAGCAAGGTTCAACGATCTGAGATTTGT...CCCAGCAGCGAAGCGCGCCCAGCGGAGGAGCGGTTGCTCTGCGCAGCTGCCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000576263.5
CDS-3UTR CAA 90 bp AAGAGTGTTTCTCTAAGCATCCTTCGCAGGGTGCCACCGCCGTTTCCAGGCACTAGGGACGAAGCCAGTTaGGTGAGGGCCCGCGCTATG +
Preference number: 5 (lower is better)
Translates to: KSVSLSILRRVPPPFPGTRDEAS*VRARAM
Trigger: CATAGCGCGGGCCCTCACCAAACTGGCTTCGTCCCT...AGTGCCTGGAAACGGCGGTGGCACCCTGCGAAGGATGCTTAGAGAAACACTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR CAA 90 bp CCTCGGCCCCGGGGCGGCCCAGCCTCGCCGAGCTCCATTAGTTGGCATCCGAAAGTTGAACCTTGCTACTaGGTTTTTCATAACAGCAGA +
Preference number: 5 (lower is better)
Translates to: PRPRGGPASPSSISWHPKVEPCY*VFHNSR
Trigger: TCTGCTGTTATGAAAAACCAAGTAGCAAGGTTCAAC...TTTCGGATGCCAACTAATGGAGCTCGGCGAGGCTGGGCCGCCCCGGGGCCGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CAA 90 bp AAAGGTGGGTTTGAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCGCTGCCAGTGGGGCCTaGGGTAAGGCAGATTGGGGT +
Preference number: 5 (lower is better)
Translates to: KGGFEKDQRTRGPLGFEGAASGA*GKADWG
Trigger: ACCCCAATCTGCCTTACCCAAGGCCCCACTGGCAGC...GCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTCAAACCCACCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp ACTAGGACCAGAGAGCCCTTTCCTGCTATTTGCTTGAGAAACAAAGCCTTCCCTGGCGCCCCCTCCCAGTaGGAGTCCGGTGGTGAAGCG +
Preference number: 5 (lower is better)
Translates to: TRTREPFPAICLRNKAFPGAPSQ*ESGGEA
Trigger: CGCTTCACCACCGGACTCCAACTGGGAGGGGGCGCC...AGGGAAGGCTTTGTTTCTCAAGCAAATAGCAGGAAAGGGCTCTCTGGTCCTAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000646519.1
CDS-3UTR CAA 90 bp TCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCGGAATTGCCGAGGGCTACCACCTaGAAGGCCACGGGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: SCFHVLTWILGQSLSSELPRATT*KATGRV
Trigger: GACCCTGCCCGTGGCCTTCAAGGTGGTAGCCCTCGG...CAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp AGCCCCTTGCCCTCCTTGGCCCTCCATTGTAAGAAATACAAATGTCAAAGGCTGGGGTCCACTCTGGCTTaGGGAAGAGCCGGGGTAGGG +
Preference number: 5 (lower is better)
Translates to: SPLPSLALHCKKYKCQRLGSTLA*GRAGVG
Trigger: CCCTACCCCGGCTCTTCCCAAAGCCAGAGTGGACCC...CAGCCTTTGACATTTGTATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp AAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTGCGGTTCCCCTGTTGTGTaGTTTGGTAAGGCTGGTTGG +
Preference number: 5 (lower is better)
Translates to: KAVCRSPWAICPLSSATCGSPVV*FGKAGW
Trigger: CCAACCAGCCTTACCAAACAACACAACAGGGGAACC...GCAGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp AAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTGCCCTCCTGGAGAAAGTTaGCACCGCACTTGTGGTTCT +
Preference number: 5 (lower is better)
Translates to: KAVCRSPWAICPLSSATCPPGES*HRTCGS
Trigger: AGAACCACAAGTGCGGTGCAAACTTTCTCCAGGAGG...GCAGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371432.7
ENST00000647337.2
CDS-3UTR CAA 90 bp CCCAGTTCTGAAGCACCTGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGGGTGAGAAATCAAGTTaGATGAGGCCGACTGCCGGG +
Preference number: 5 (lower is better)
Translates to: PSSEAPAWLFLLRVEGQRGEKSS*MRPTAG
Trigger: CCCGGCAGTCGGCCTCATCAAACTTGATTTCTCACC...CCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCAGGTGCTTCAGAACTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR CAA 90 bp GTGAAAGAGTGTTTCTCTAAGCATCCTTCGCAGGGTGCCACCGCCGTTTCCAGGCTTTGGCGACTTGCTTaGAGCTCCTCTCCCTCCACG +
Preference number: 5 (lower is better)
Translates to: VKECFSKHPSQGATAVSRLWRLA*SSSPST
Trigger: CGTGGAGGGAGAGGAGCTCAAAGCAAGTCGCCAAAG...CCTGGAAACGGCGGTGGCACCCTGCGAAGGATGCTTAGAGAAACACTCTTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR CAA 90 bp GATGTGAAAGAGTGTTTCTCTAAGCATCCTTCGCAGGGTGCCACCGCCGTTTCCGGCCTCGCTGCTGCTTaGGCGACTTGCTTTGAGCTC +
Preference number: 5 (lower is better)
Translates to: DVKECFSKHPSQGATAVSGLAAA*ATCFEL
Trigger: GAGCTCAAAGCAAGTCGCCAAAGCAGCAGCGAGGCC...GGAAACGGCGGTGGCACCCTGCGAAGGATGCTTAGAGAAACACTCTTTCACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR CAA 90 bp GTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAACTGGTTTCCGAGGGCTACCACCTaGAAGGCCACGGGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: VMEASILPHVPLVHLNWFPRATT*KATGRV
Trigger: GACCCTGCCCGTGGCCTTCAAGGTGGTAGCCCTCGG...AAACCAGTTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp AATGCGCCTAGGCACATCGGTGATGGCAGGAAGCCCAGTGCCCCGTGTGGAAGAGTGATAGGTAGCTACTaGGGGAGGATTTGTGAAGAC +
Preference number: 5 (lower is better)
Translates to: NAPRHIGDGRKPSAPCGRVIGSY*GRICED
Trigger: GTCTTCACAAATCCTCCCCAAGTAGCTACCTATCAC...TCTTCCACACGGGGCACTGGGCTTCCTGCCATCACCGATGTGCCTAGGCGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR CAA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAGCCCCTTGCCCTCCTaGGCCCTCCATTGTAAGAAA +
Preference number: 5 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLRSPLPS*ALHCKK
Trigger: TTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp AAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTGCTCTGCTAAATTCTGCTaGGGTGGGTGGAGGATTCCA +
Preference number: 5 (lower is better)
Translates to: KAVCRSPWAICPLSSATCSAKFC*GGWRIP
Trigger: TGGAATCCTCCACCCACCCAAGCAGAATTTAGCAGA...GCAGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp AATGCGCCTAGGCACATCGGTGATGGCAGGAAGCCCAGTGCCCCGTGTGGAAGAAAGTTTGCACCGCACTaGTGGTTCTGTGGTTGTTTG +
Preference number: 5 (lower is better)
Translates to: NAPRHIGDGRKPSAPCGRKFAPH*WFCGCL
Trigger: CAAACAACCACAGAACCACAAGTGCGGTGCAAACTT...TCTTCCACACGGGGCACTGGGCTTCCTGCCATCACCGATGTGCCTAGGCGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS CCA 90 bp ATAATTTTCATCGTTACCCGCCATGACAGTAACCACAGTCCCATCTaGTACCTCTCCGAGGGCTACCACCTTGAAGGCCACGGGCAGGGT +
Preference number: 5 (lower is better)
Translates to: IIFIVTRHDSNHSPI*YLSEGYHLEGHGQG
Trigger: ACCCTGCCCGTGGCCTTCAAGGTGGTAGCCCTCGGAGAGGTACCAGATGGGACTGTGGTTACTGTCATGGCGGGTAACGATGAAAATTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000478660.6
ENST00000576263.5
ENST00000625924.1
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp CTGAATGATGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGTCCACCATGGTGCGGTaGTCGTGGGGCGGCCGCAAC +
Preference number: 5 (lower is better)
Translates to: LNDGTVMEASILPHVPLVSTMVR*SWGGRN
Trigger: GTTGCGGCCGCCCCACGACAACCGCACCATGGTGGA...CACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCATCATTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp CTTGAGCCTTCTGCTTCTCAATATCTACCCTCTTATGGCTGCAAGATCATGACTCCGAGGGCTACCACCTaGAAGGCCACGGGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: LEPSASQYLPSYGCKIMTPRATT*KATGRV
Trigger: GACCCTGCCCGTGGCCTTCAAGGTGGTAGCCCTCGG...AGTCATGATCTTGCAGCCATAAGAGGGTAGATATTGAGAAGCAGAAGGCTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGGGTTCCCCTGTTGTGTaGTTTGGTAAGGCTGGTTGG +
Preference number: 5 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLRGSPVV*FGKAGW
Trigger: CCAACCAGCCTTACCAAACAACACAACAGGGGAACC...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp AAAGGTGGGTTTGAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCAGCCCCTTGCCCTCCTaGGCCCTCCATTGTAAGAAA +
Preference number: 5 (lower is better)
Translates to: KGGFEKDQRTRGPLGFEGSPLPS*ALHCKK
Trigger: TTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT...GCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTCAAACCCACCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp CGTCACCAGAGATGGATGCCCCACCAACGCTGGAGCTGGCCTCGCTGCTGCTTTATCCCAAAAGAAGTTTaGCTGACATGGTGTCACTGT +
Preference number: 5 (lower is better)
Translates to: RHQRWMPHQRWSWPRCCFIPKEV*LTWCHC
Trigger: ACAGTGACACCATGTCAGCAAAACTTCTTTTGGGAT...AAAGCAGCAGCGAGGCCAGCTCCAGCGTTGGTGGGGCATCCATCTCTGGTGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR CAA 90 bp GTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAACTGGTTTCTCACGTCGCTCATTTaGCCGGGCTGCAGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: VMEASILPHVPLVHLNWFLTSLI*PGCRLL
Trigger: CAGCAGCCTGCAGCCCGGCAAAATGAGCGACGTGAG...AAACCAGTTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp TGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAACTCACGTCGCTCATTTaGCCGGGCTGCAGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: WYCDGSIHSTSCPFSAPQLTSLI*PGCRLL
Trigger: CAGCAGCCTGCAGCCCGGCAAAATGAGCGACGTGAG...TTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp ACTTTTGCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTGTTGCTGCTGCTGTaGCGCAGCCACCACCGGGCT +
Preference number: 5 (lower is better)
Translates to: TFANASCFHVLTWILGQSLLLLL*RSHHRA
Trigger: AGCCCGGTGGTGGCTGCGCAACAGCAGCAGCAACAG...GGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGCAAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp TTGCTTGAGAAACAAAGCCTTCCCTCCTCCCAAGTTGAAAGAAATAAAGGAGTCCCGAGGGCTACCACCTaGAAGGCCACGGGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: LLEKQSLPSSQVERNKGVPRATT*KATGRV
Trigger: GACCCTGCCCGTGGCCTTCAAGGTGGTAGCCCTCGG...GACTCCTTTATTTCTTTCAACTTGGGAGGAGGGAAGGCTTTGTTTCTCAAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000646519.1
CDS-3UTR CAA 90 bp AACGTCACCAGAGATGGATGCCCCACCAACGCTGGAGCTGGCCTCGCTGCTGCTGTTGAACCTTGCTACTaGGTTTTTCATAACAGCAGA +
Preference number: 5 (lower is better)
Translates to: NVTRDGCPTNAGAGLAAAVEPCY*VFHNSR
Trigger: TCTGCTGTTATGAAAAACCAAGTAGCAAGGTTCAAC...AGCAGCAGCGAGGCCAGCTCCAGCGTTGGTGGGGCATCCATCTCTGGTGACGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR CAA 90 bp CTTGAGCCTTCTGCTTCTCAATATCTACCCTCTTATGGCTGCAAGATCATGACTGGGTCCACTCTGGCTTaGGGAAGAGCCGGGGTAGGG +
Preference number: 5 (lower is better)
Translates to: LEPSASQYLPSYGCKIMTGSTLA*GRAGVG
Trigger: CCCTACCCCGGCTCTTCCCAAAGCCAGAGTGGACCC...AGTCATGATCTTGCAGCCATAAGAGGGTAGATATTGAGAAGCAGAAGGCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp AAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTGCATCTCTGGTGCAATTTaGCTCTCCTGTACTAGGTGT +
Preference number: 5 (lower is better)
Translates to: KAVCRSPWAICPLSSATCISGAI*LSCTRC
Trigger: ACACCTAGTACAGGAGAGCAAAATTGCACCAGAGAT...GCAGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp TGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAAGCTGCCAGTGGGGCCTaGGGTAAGGCAGATTGGGGT +
Preference number: 5 (lower is better)
Translates to: WYCDGSIHSTSCPFSAPQAASGA*GKADWG
Trigger: ACCCCAATCTGCCTTACCCAAGGCCCCACTGGCAGC...TTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp TCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCGGAATTGGCGGGGGACTTGAGTTaGCAGCTTGGAATGGGGTCC +
Preference number: 5 (lower is better)
Translates to: SCFHVLTWILGQSLSSELAGDLS*QLGMGS
Trigger: GGACCCCATTCCAAGCTGCAAACTCAAGTCCCCCGC...CAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR CAA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATGTGATAGGTAGCTACTaGGGGAGGATTTGTGAAGAC +
Preference number: 5 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNVIGSY*GRICED
Trigger: GTCTTCACAAATCCTCCCCAAGTAGCTACCTATCAC...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGGTGATAGGTAGCTACTaGGGGAGGATTTGTGAAGAC +
Preference number: 5 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLRVIGSY*GRICED
Trigger: GTCTTCACAAATCCTCCCCAAGTAGCTACCTATCAC...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp AAGAGTGTTTCTCTAAGCATCCTTCGCAGGGTGCCACCGCCGTTTCCAGGCACTGTGATAGGTAGCTACTaGGGGAGGATTTGTGAAGAC +
Preference number: 5 (lower is better)
Translates to: KSVSLSILRRVPPPFPGTVIGSY*GRICED
Trigger: GTCTTCACAAATCCTCCCCAAGTAGCTACCTATCAC...AGTGCCTGGAAACGGCGGTGGCACCCTGCGAAGGATGCTTAGAGAAACACTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS-3UTR CAA 90 bp TCTGAAGCACCTGCCTGGCTCTTCTTACTGAGAGTGGAAGGCCAGAGGCAGAAGGAAGCTCGATTGCAATaGTCTCTCTTGAGCCTTCTG +
Preference number: 5 (lower is better)
Translates to: SEAPAWLFLLRVEGQRQKEARLQ*SLLSLL
Trigger: CAGAAGGCTCAAGAGAGACAATTGCAATCGAGCTTC...CTTCTGCCTCTGGCCTTCCACTCTCAGTAAGAAGAGCCAGGCAGGTGCTTCAGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR CAA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATCCTACAAAGGTGGGTTaGAGAAGGACCAGAGAACAA +
Preference number: 5 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNPTKVG*RRTREQ
Trigger: TTGTTCTCTGGTCCTTCTCAAACCCACCTTTGTAGG...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp AAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTGCGGAGGGAAGAAGTGCTaGAATTTTTCCCAAGGAAAA +
Preference number: 5 (lower is better)
Translates to: KAVCRSPWAICPLSSATCGGKKC*NFSQGK
Trigger: TTTTCCTTGGGAAAAATTCAAGCACTTCTTCCCTCC...GCAGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp TGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAATCTTTGCCGGAGTCTTaGGAACACCCGGGGTGGCAG +
Preference number: 5 (lower is better)
Translates to: WYCDGSIHSTSCPFSAPQSLPES*EHPGWQ
Trigger: CTGCCACCCCGGGTGTTCCAAAGACTCCGGCAAAGA...TTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR CAA 90 bp TGCTATGAAGCCTGGCGATTTAGAGTTTTGCTTAACTATGAAACCACAGAACATCCGAGGGCTACCACCTaGAAGGCCACGGGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: CYEAWRFRVLLNYETTEHPRATT*KATGRV
Trigger: GACCCTGCCCGTGGCCTTCAAGGTGGTAGCCCTCGG...ATGTTCTGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCAGGCTTCATAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp AAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTGCACAAATCTCAGATCGTaGAACCTTGCTACTTGGTTT +
Preference number: 5 (lower is better)
Translates to: KAVCRSPWAICPLSSATCTNLRS*NLATWF
Trigger: AAACCAAGTAGCAAGGTTCAACGATCTGAGATTTGT...GCAGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATCAATCTGAAGCTCGATaGCAATTGTCTCTCTTGAGC +
Preference number: 5 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNQSEAR*QLSLLS
Trigger: GCTCAAGAGAGACAATTGCAATCGAGCTTCAGATTG...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGCAATCTGAAGCTCGATaGCAATTGTCTCTCTTGAGC +
Preference number: 5 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLRQSEAR*QLSLLS
Trigger: GCTCAAGAGAGACAATTGCAATCGAGCTTCAGATTG...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp GAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCAAATCTCTGCTAATTGGGGTTCCCCTGTaGTGTTGTTTGGTAAGGCTG +
Preference number: 5 (lower is better)
Translates to: EKDQRTRGPLGFEGKSLLIGVPL*CCLVRL
Trigger: CAGCCTTACCAAACAACACAACAGGGGAACCCCAAT...TAGCAGAGATTTGCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp GCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCAGCCCCTTGCCCTCCTaGGCCCTCCATTGTAAGAAA +
Preference number: 5 (lower is better)
Translates to: ANASCFHVLTWILGQSLSSPLPS*ALHCKK
Trigger: TTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT...GGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp CAAAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTACGATAGTTAATCTGTaGAGTTTCTCAGTTCTGGGC +
Preference number: 5 (lower is better)
Translates to: QRLSVGPRGPYVLSAQLPTIVNL*SFSVLG
Trigger: GCCCAGAACTGAGAAACTCAACAGATTAACTATCGT...AGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp GCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCCACTCACTGACTCTGTaGGTCTCGGTGGCTGGTAGT +
Preference number: 5 (lower is better)
Translates to: ANASCFHVLTWILGQSLSHSLTL*VSVAGS
Trigger: ACTACCAGCCACCGAGACCAACAGAGTCAGTGAGTG...GGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371438.5
CDS-3UTR CAA 90 bp CTTTGCTTTGGTCTTGAAATCACAAATCAAACACATGACCCAGTGCAAATTAAGGGCGCCCCCTCCCAGTaGGAGTCCGGTGGTGAAGCG +
Preference number: 5 (lower is better)
Translates to: LCFGLEITNQTHDPVQIKGAPSQ*ESGGEA
Trigger: CGCTTCACCACCGGACTCCAACTGGGAGGGGGCGCC...CTTAATTTGCACTGGGTCATGTGTTTGATTTGTGATTTCAAGACCAAAGCAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR CAA 90 bp TGGCTCCTCCGAGGAGAGGAACAAGGTGGTCGAAGACTGGGAGTCCAAGGTACTTTCCCTCCTCCCAAGTaGAAAGAAATAAAGGAGTCT +
Preference number: 5 (lower is better)
Translates to: WLLRGEEQGGRRLGVQGTFPPPK*KEIKES
Trigger: AGACTCCTTTATTTCTTTCAACTTGGGAGGAGGGAA...AGTACCTTGGACTCCCAGTCTTCGACCACCTTGTTCCTCTCCTCGGAGGAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CAA 90 bp TTGCTTGAGAAACAAAGCCTTCCCTCCTCCCAAGTTGAAAGAAATAAAGGAGTCAGGGACGAAGCCAGTTaGGTGAGGGCCCGCGCTATG +
Preference number: 5 (lower is better)
Translates to: LLEKQSLPSSQVERNKGVRDEAS*VRARAM
Trigger: CATAGCGCGGGCCCTCACCAAACTGGCTTCGTCCCT...GACTCCTTTATTTCTTTCAACTTGGGAGGAGGGAAGGCTTTGTTTCTCAAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478660.6
CDS-3UTR CAA 90 bp TGCTATGAAGCCTGGCGATTTAGAGTTTTGCTTAACTATGAAACCACAGAACATCTGTTGCTGCTGCTGTaGCGCAGCCACCACCGGGCT +
Preference number: 5 (lower is better)
Translates to: CYEAWRFRVLLNYETTEHLLLLL*RSHHRA
Trigger: AGCCCGGTGGTGGCTGCGCAACAGCAGCAGCAACAG...ATGTTCTGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCAGGCTTCATAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp AAATGTGGCTGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGCTGTTGCTGCTGCTGTaGCGCAGCCACCACCGGGCT +
Preference number: 5 (lower is better)
Translates to: KCGCIEKTANSSNVCATKLLLLL*RSHHRA
Trigger: AGCCCGGTGGTGGCTGCGCAACAGCAGCAGCAACAG...CTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCAGCCACATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp AAATTAGAAAACCACATCACTCCAGCATTTCATGCTGATAAAGGGCTAAAGGTTTCCACCATGGTGCGGTaGTCGTGGGGCGGCCGCAAC +
Preference number: 5 (lower is better)
Translates to: KLENHITPAFHADKGLKVSTMVR*SWGGRN
Trigger: GTTGCGGCCGCCCCACGACAACCGCACCATGGTGGA...AACCTTTAGCCCTTTATCAGCATGAAATGCTGGAGTGATGTGGTTTTCTAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp TACTGTAACTTTAATTGCTCTGTGATAGGTAGCTACTTGGGGAGGATTTGTGAAGGGTCCACTCTGGCTTaGGGAAGAGCCGGGGTAGGG +
Preference number: 5 (lower is better)
Translates to: YCNFNCSVIGSYLGRICEGSTLA*GRAGVG
Trigger: CCCTACCCCGGCTCTTCCCAAAGCCAGAGTGGACCC...TTCACAAATCCTCCCCAAGTAGCTACCTATCACAGAGCAATTAAAGTTACAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR CAA 90 bp AAAGGTGGGTTTGAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCCAATCTGAAGCTCGATaGCAATTGTCTCTCTTGAGC +
Preference number: 5 (lower is better)
Translates to: KGGFEKDQRTRGPLGFEGQSEAR*QLSLLS
Trigger: GCTCAAGAGAGACAATTGCAATCGAGCTTCAGATTG...GCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTCAAACCCACCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATGTCCACCTCTCTGAATaGGCATATGAACAGGTTATT +
Preference number: 5 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNVHLSE*AYEQVI
Trigger: AATAACCTGTTCATATGCCAATTCAGAGAGGTGGAC...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp AAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTGCTGGCGATTTAGAGTTTaGCTTAACTATGAAACCACA +
Preference number: 5 (lower is better)
Translates to: KAVCRSPWAICPLSSATCWRFRV*LNYETT
Trigger: TGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCA...GCAGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATGGAGGGAAGAAGTGCTaGAATTTTTCCCAAGGAAAA +
Preference number: 5 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNGGKKC*NFSQGK
Trigger: TTTTCCTTGGGAAAAATTCAAGCACTTCTTCCCTCC...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp AAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTGCAAAAATGTGGCTGCATaGAAAAGACTGCAAATTCCA +
Preference number: 5 (lower is better)
Translates to: KAVCRSPWAICPLSSATCKNVAA*KRLQIP
Trigger: TGGAATTTGCAGTCTTTTCAATGCAGCCACATTTTT...GCAGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp GAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCAAATCTCTGCTAAAGTTTGCACCGCACTaGTGGTTCTGTGGTTGTTTG +
Preference number: 5 (lower is better)
Translates to: EKDQRTRGPLGFEGKSLLKFAPH*WFCGCL
Trigger: CAAACAACCACAGAACCACAAGTGCGGTGCAAACTT...TAGCAGAGATTTGCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371432.7
ENST00000647337.2
CDS-3UTR CAA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTTGGTGGAGCTTCAGCTaGTCAGTGATGCAACTCAGC +
Preference number: 5 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPWWSFS*SVMQLS
Trigger: GCTGAGTTGCATCACTGACAAGCTGAAGCTCCACCA...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR CAA 90 bp AAATTAGAAAACCACATCACTCCAGCATTTCATGCTGATAAAGGGCTAAAGGTTCTGTTGCTGCTGCTGTaGCGCAGCCACCACCGGGCT +
Preference number: 5 (lower is better)
Translates to: KLENHITPAFHADKGLKVLLLLL*RSHHRA
Trigger: AGCCCGGTGGTGGCTGCGCAACAGCAGCAGCAACAG...AACCTTTAGCCCTTTATCAGCATGAAATGCTGGAGTGATGTGGTTTTCTAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCTCCACCATGGTGCGGTaGTCGTGGGGCGGCCGCAAC +
Preference number: 5 (lower is better)
Translates to: HIYALSLYMYILIRVGCGSTMVR*SWGGRN
Trigger: GTTGCGGCCGCCCCACGACAACCGCACCATGGTGGA...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp AATAGGATGCAGCTGGCACTGGCGGTAGCATTTTTATGTCAATTAATTAAAATTTCCACCATGGTGCGGTaGTCGTGGGGCGGCCGCAAC +
Preference number: 5 (lower is better)
Translates to: NRMQLALAVAFLCQLIKISTMVR*SWGGRN
Trigger: GTTGCGGCCGCCCCACGACAACCGCACCATGGTGGA...AATTTTAATTAATTGACATAAAAATGCTACCGCCAGTGCCAGCTGCATCCTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCCCGAGGGCTACCACCTaGAAGGCCACGGGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: HIYALSLYMYILIRVGCGPRATT*KATGRV
Trigger: GACCCTGCCCGTGGCCTTCAAGGTGGTAGCCCTCGG...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGGTTGAACCTTGCTACTaGGTTTTTCATAACAGCAGA +
Preference number: 5 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLRVEPCY*VFHNSR
Trigger: TCTGCTGTTATGAAAAACCAAGTAGCAAGGTTCAAC...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp TATATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGACAAATCTCAGATCGTaGAACCTTGCTACTTGGTTT +
Preference number: 5 (lower is better)
Translates to: YIDTCGMWPPDTTGPLLRTNLRS*NLATWF
Trigger: AAACCAAGTAGCAAGGTTCAACGATCTGAGATTTGT...CCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAATATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp AGCCCCTTGCCCTCCTTGGCCCTCCATTGTAAGAAATACAAATGTCAAAGGCTGGAAGCTCGATTGCAATaGTCTCTCTTGAGCCTTCTG +
Preference number: 5 (lower is better)
Translates to: SPLPSLALHCKKYKCQRLEARLQ*SLLSLL
Trigger: CAGAAGGCTCAAGAGAGACAATTGCAATCGAGCTTC...CAGCCTTTGACATTTGTATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTTCTGCTAAATTCTGCTaGGGTGGGTGGAGGATTCCA +
Preference number: 5 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPSAKFC*GGWRIP
Trigger: TGGAATCCTCCACCCACCCAAGCAGAATTTAGCAGA...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp AGCCCCTTGCCCTCCTTGGCCCTCCATTGTAAGAAATACAAATGTCAAAGGCTGCCTACAAAGGTGGGTTaGAGAAGGACCAGAGAACAA +
Preference number: 5 (lower is better)
Translates to: SPLPSLALHCKKYKCQRLPTKVG*RRTREQ
Trigger: TTGTTCTCTGGTCCTTCTCAAACCCACCTTTGTAGG...CAGCCTTTGACATTTGTATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp CAAAGGCTGTCTGTAGGTCCCCGTGGGCCATATGTCCTCTCAGCTCAGCTACCTAGAAGGCAAAGTGTTTaGCTTTCCCATCCATTTTTA +
Preference number: 5 (lower is better)
Translates to: QRLSVGPRGPYVLSAQLPRRQSV*LSHPFL
Trigger: TAAAAATGGATGGGAAAGCAAAACACTTTGCCTTCT...AGGTAGCTGAGCTGAGAGGACATATGGCCCACGGGGACCTACAGACAGCCTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp GTAGAGATATGGAGTGCTGCTGGTCTGGAAGGGTCCACTCTGGCTTTGGGAAGATTTCCTGCTATTTGCTaGAGAAACAAAGCCTTCCCT +
Preference number: 5 (lower is better)
Translates to: VEIWSAAGLEGSTLALGRFPAIC*RNKAFP
Trigger: AGGGAAGGCTTTGTTTCTCAAGCAAATAGCAGGAAA...TCTTCCCAAAGCCAGAGTGGACCCTTCCAGACCAGCAGCACTCCATATCTCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR CAA 90 bp AAACTAGGTTTAGAGTCATCAAGCTTCTGTCTGTGCCTTCTGGGTTCCCGAGGTTGTGGCTTTTCCCCCTaGCTCTTTCTCTCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: KLGLESSSFCLCLLGSRGCGFSP*LFLSLS
Trigger: AGAGAGAGAGAGAAAGAGCAAGGGGGAAAAGCCACA...ACCTCGGGAACCCAGAAGGCACAGACAGAAGCTTGATGACTCTAAACCTAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR CAA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCCTGTTGCTGCTGCTGTaGCGCAGCCACCACCGGGCT +
Preference number: 5 (lower is better)
Translates to: HIYALSLYMYILIRVGCGLLLLL*RSHHRA
Trigger: AGCCCGGTGGTGGCTGCGCAACAGCAGCAGCAACAG...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp AAATGCTTGGGAACTGCCTGGGGTCTGAAAAAGGGCCCAGTTCTGAAGCACCTGGTTGAACCTTGCTACTaGGTTTTTCATAACAGCAGA +
Preference number: 5 (lower is better)
Translates to: KCLGTAWGLKKGPVLKHLVEPCY*VFHNSR
Trigger: TCTGCTGTTATGAAAAACCAAGTAGCAAGGTTCAAC...CAGGTGCTTCAGAACTGGGCCCTTTTTCAGACCCCAGGCAGTTCCCAAGCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000483377.5
ENST00000646519.1
CDS-3UTR CAA 90 bp AAAGGTGGGTTTGAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCACAAATCTCAGATCGTaGAACCTTGCTACTTGGTTT +
Preference number: 5 (lower is better)
Translates to: KGGFEKDQRTRGPLGFEGTNLRS*NLATWF
Trigger: AAACCAAGTAGCAAGGTTCAACGATCTGAGATTTGT...GCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTCAAACCCACCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp AAATGCTTGGGAACTGCCTGGGGTCTGAAAAAGGGCCCAGTTCTGAAGCACCTGACAAATCTCAGATCGTaGAACCTTGCTACTTGGTTT +
Preference number: 5 (lower is better)
Translates to: KCLGTAWGLKKGPVLKHLTNLRS*NLATWF
Trigger: AAACCAAGTAGCAAGGTTCAACGATCTGAGATTTGT...CAGGTGCTTCAGAACTGGGCCCTTTTTCAGACCCCAGGCAGTTCCCAAGCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000483377.5
ENST00000646519.1
CDS-3UTR CAA 90 bp TCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCGGAATTGGAAGCTCGATTGCAATaGTCTCTCTTGAGCCTTCTG +
Preference number: 5 (lower is better)
Translates to: SCFHVLTWILGQSLSSELEARLQ*SLLSLL
Trigger: CAGAAGGCTCAAGAGAGACAATTGCAATCGAGCTTC...CAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp TCCTTAAAGCTGTACACACATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCGGTTCCCCTGTTGTGTaGTTTGGTAAGGCTGGTTGG +
Preference number: 5 (lower is better)
Translates to: SLKLYTHLLPSEFITDGPGSPVV*FGKAGW
Trigger: CCAACCAGCCTTACCAAACAACACAACAGGGGAACC...GGGACCATCTGTGATAAATTCAGAAGGGAGGAGATGTGTGTACAGCTTTAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp CTGAATGATGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGGGTTCCCCTGTTGTGTaGTTTGGTAAGGCTGGTTGG +
Preference number: 5 (lower is better)
Translates to: LNDGTVMEASILPHVPLVGSPVV*FGKAGW
Trigger: CCAACCAGCCTTACCAAACAACACAACAGGGGAACC...CACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCATCATTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp TGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAAATTGGGGTTCCCCTGTaGTGTTGTTTGGTAAGGCTG +
Preference number: 5 (lower is better)
Translates to: WYCDGSIHSTSCPFSAPQIGVPL*CCLVRL
Trigger: CAGCCTTACCAAACAACACAACAGGGGAACCCCAAT...TTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp AAATTAGAAAACCACATCACTCCAGCATTTCATGCTGATAAAGGGCTAAAGGTTGCTGCCAGTGGGGCCTaGGGTAAGGCAGATTGGGGT +
Preference number: 5 (lower is better)
Translates to: KLENHITPAFHADKGLKVAASGA*GKADWG
Trigger: ACCCCAATCTGCCTTACCCAAGGCCCCACTGGCAGC...AACCTTTAGCCCTTTATCAGCATGAAATGCTGGAGTGATGTGGTTTTCTAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp ATTGATACGTGTGGGATGTGGCCCCCAGATACCACTGGGCCACTGCTGAGGAATAGAAGGCAAAGTGTTTaGCTTTCCCATCCATTTTTA +
Preference number: 5 (lower is better)
Translates to: IDTCGMWPPDTTGPLLRNRRQSV*LSHPFL
Trigger: TAAAAATGGATGGGAAAGCAAAACACTTTGCCTTCT...ATTCCTCAGCAGTGGCCCAGTGGTATCTGGGGGCCACATCCCACACGTATCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTACTTCTCTGCTCATTTaGAAAGGGCTCTGGCAAGTG +
Preference number: 5 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPTSLLI*KGLWQV
Trigger: CACTTGCCAGAGCCCTTTCAAAATGAGCAGAGAAGT...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCCTCACGTCGCTCATTTaGCCGGGCTGCAGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: HIYALSLYMYILIRVGCGLTSLI*PGCRLL
Trigger: CAGCAGCCTGCAGCCCGGCAAAATGAGCGACGTGAG...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp AATAGGATGCAGCTGGCACTGGCGGTAGCATTTTTATGTCAATTAATTAAAATTCTCACGTCGCTCATTTaGCCGGGCTGCAGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: NRMQLALAVAFLCQLIKILTSLI*PGCRLL
Trigger: CAGCAGCCTGCAGCCCGGCAAAATGAGCGACGTGAG...AATTTTAATTAATTGACATAAAAATGCTACCGCCAGTGCCAGCTGCATCCTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp GTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAACTGGTTTGTGATAGGTAGCTACTaGGGGAGGATTTGTGAAGAC +
Preference number: 5 (lower is better)
Translates to: VMEASILPHVPLVHLNWFVIGSY*GRICED
Trigger: GTCTTCACAAATCCTCCCCAAGTAGCTACCTATCAC...AAACCAGTTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp TGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAAGAAGCTCGATTGCAATaGTCTCTCTTGAGCCTTCTG +
Preference number: 5 (lower is better)
Translates to: WYCDGSIHSTSCPFSAPQEARLQ*SLLSLL
Trigger: CAGAAGGCTCAAGAGAGACAATTGCAATCGAGCTTC...TTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp GCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCATCTCTGGTGCAATTTaGCTCTCCTGTACTAGGTGT +
Preference number: 5 (lower is better)
Translates to: ANASCFHVLTWILGQSLSISGAI*LSCTRC
Trigger: ACACCTAGTACAGGAGAGCAAAATTGCACCAGAGAT...GGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp TGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAGAACCACGAGCCCCTTGCCCTCCTaGGCCCTCCATTGTAAGAAA +
Preference number: 5 (lower is better)
Translates to: CIEKTANSSNVCATKRTTSPLPS*ALHCKK
Trigger: TTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT...CGTGGTTCTCTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp GAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCAAATCTCTGCTAATTAAGGATTTGCACTaGGAAATCTGCCATGTGACT +
Preference number: 5 (lower is better)
Translates to: EKDQRTRGPLGFEGKSLLIKDLH*EICHVT
Trigger: AGTCACATGGCAGATTTCCAAGTGCAAATCCTTAAT...TAGCAGAGATTTGCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp TGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAACCTACAAAGGTGGGTTaGAGAAGGACCAGAGAACAA +
Preference number: 5 (lower is better)
Translates to: WYCDGSIHSTSCPFSAPQPTKVG*RRTREQ
Trigger: TTGTTCTCTGGTCCTTCTCAAACCCACCTTTGTAGG...TTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp AAAGGTGGGTTTGAGAAGGACCAGAGAACAAGGGGGCCGTTAGGGTTTGAAGGCAAAAATGTGGCTGCATaGAAAAGACTGCAAATTCCA +
Preference number: 5 (lower is better)
Translates to: KGGFEKDQRTRGPLGFEGKNVAA*KRLQIP
Trigger: TGGAATTTGCAGTCTTTTCAATGCAGCCACATTTTT...GCCTTCAAACCCTAACGGCCCCCTTGTTCTCTGGTCCTTCTCAAACCCACCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp GTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAACTGGTTTACTTCTCTGCTCATTTaGAAAGGGCTCTGGCAAGTG +
Preference number: 5 (lower is better)
Translates to: VMEASILPHVPLVHLNWFTSLLI*KGLWQV
Trigger: CACTTGCCAGAGCCCTTTCAAAATGAGCAGAGAAGT...AAACCAGTTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp GTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAACTGGTTTAAGTTTGCACCGCACTaGTGGTTCTGTGGTTGTTTG +
Preference number: 5 (lower is better)
Translates to: VMEASILPHVPLVHLNWFKFAPH*WFCGCL
Trigger: CAAACAACCACAGAACCACAAGTGCGGTGCAAACTT...AAACCAGTTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371432.7
ENST00000647337.2
CDS-3UTR CAA 90 bp TCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCGGAATTGGCCCTTTCCTGCTATTaGCTTGAGAAACAAAGCCTT +
Preference number: 5 (lower is better)
Translates to: SCFHVLTWILGQSLSSELALSCY*LEKQSL
Trigger: AAGGCTTTGTTTCTCAAGCAAATAGCAGGAAAGGGC...CAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR CAA 90 bp CAGATGGTCCCTAATGGTGTGGACTTCTCTGCTCATTTTGAAAGGGCTCTGGCAACAAATCTCAGATCGTaGAACCTTGCTACTTGGTTT +
Preference number: 5 (lower is better)
Translates to: QMVPNGVDFSAHFERALATNLRS*NLATWF
Trigger: AAACCAAGTAGCAAGGTTCAACGATCTGAGATTTGT...TGCCAGAGCCCTTTCAAAATGAGCAGAGAAGTCCACACCATTAGGGACCATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp ATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTAATGGTGTGGACTTCTCTGTGATAGGTAGCTACTaGGGGAGGATTTGTGAAGAC +
Preference number: 5 (lower is better)
Translates to: ISSLLNLSQMVPNGVDFSVIGSY*GRICED
Trigger: GTCTTCACAAATCCTCCCCAAGTAGCTACCTATCAC...AGAGAAGTCCACACCATTAGGGACCATCTGTGATAAATTCAGAAGGGAGGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp GTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAACTGGTTTATCTCTGGTGCAATTTaGCTCTCCTGTACTAGGTGT +
Preference number: 5 (lower is better)
Translates to: VMEASILPHVPLVHLNWFISGAI*LSCTRC
Trigger: ACACCTAGTACAGGAGAGCAAAATTGCACCAGAGAT...AAACCAGTTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp TCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCGGAATTGGGAGGGAAGAAGTGCTaGAATTTTTCCCAAGGAAAA +
Preference number: 5 (lower is better)
Translates to: SCFHVLTWILGQSLSSELGGKKC*NFSQGK
Trigger: TTTTCCTTGGGAAAAATTCAAGCACTTCTTCCCTCC...CAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTACGATAGTTAATCTGTaGAGTTTCTCAGTTCTGGGC +
Preference number: 5 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPTIVNL*SFSVLG
Trigger: GCCCAGAACTGAGAAACTCAACAGATTAACTATCGT...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp ACTAGGACCAGAGAGCCCTTTCCTGCTATTTGCTTGAGAAACAAAGCCTTCCCTACGATAGTTAATCTGTaGAGTTTCTCAGTTCTGGGC +
Preference number: 5 (lower is better)
Translates to: TRTREPFPAICLRNKAFPTIVNL*SFSVLG
Trigger: GCCCAGAACTGAGAAACTCAACAGATTAACTATCGT...AGGGAAGGCTTTGTTTCTCAAGCAAATAGCAGGAAAGGGCTCTCTGGTCCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR CAA 90 bp CTGAATGATGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGACTTCTCTGCTCATTTaGAAAGGGCTCTGGCAAGTG +
Preference number: 5 (lower is better)
Translates to: LNDGTVMEASILPHVPLVTSLLI*KGLWQV
Trigger: CACTTGCCAGAGCCCTTTCAAAATGAGCAGAGAAGT...CACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCATCATTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp AGCCCCTTGCCCTCCTTGGCCCTCCATTGTAAGAAATACAAATGTCAAAGGCTGCATGGAAAGCAATTCTaGGGCAATAGCAATTGGAAA +
Preference number: 5 (lower is better)
Translates to: SPLPSLALHCKKYKCQRLHGKQF*GNSNWK
Trigger: TTTCCAATTGCTATTGCCCAAGAATTGCTTTCCATG...CAGCCTTTGACATTTGTATTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp CAGATGGTCCCTAATGGTGTGGACTTCTCTGCTCATTTTGAAAGGGCTCTGGCACATGGAAAGCAATTCTaGGGCAATAGCAATTGGAAA +
Preference number: 5 (lower is better)
Translates to: QMVPNGVDFSAHFERALAHGKQF*GNSNWK
Trigger: TTTCCAATTGCTATTGCCCAAGAATTGCTTTCCATG...TGCCAGAGCCCTTTCAAAATGAGCAGAGAAGTCCACACCATTAGGGACCATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp ACTTTTGCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCATCTCTGGTGCAATTTaGCTCTCCTGTACTAGGTGT +
Preference number: 5 (lower is better)
Translates to: TFANASCFHVLTWILGQSISGAI*LSCTRC
Trigger: ACACCTAGTACAGGAGAGCAAAATTGCACCAGAGAT...GGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGCAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp CCAGTCCCTTTCCTCGGAATTGAGGGAATCCTTAAAGCTGTACACACATCTCCTATTAAGGATTTGCACTaGGAAATCTGCCATGTGACT +
Preference number: 5 (lower is better)
Translates to: PVPFLGIEGILKAVHTSPIKDLH*EICHVT
Trigger: AGTCACATGGCAGATTTCCAAGTGCAAATCCTTAAT...AGGAGATGTGTGTACAGCTTTAAGGATTCCCTCAATTCCGAGGAAAGGGACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp GCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCCATGGAAAGCAATTCTaGGGCAATAGCAATTGGAAA +
Preference number: 5 (lower is better)
Translates to: ANASCFHVLTWILGQSLSHGKQF*GNSNWK
Trigger: TTTCCAATTGCTATTGCCCAAGAATTGCTTTCCATG...GGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp AAATGTGGCTGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGCCTCCTGGAGAAAGTTaGCACCGCACTTGTGGTTCT +
Preference number: 5 (lower is better)
Translates to: KCGCIEKTANSSNVCATKPPGES*HRTCGS
Trigger: AGAACCACAAGTGCGGTGCAAACTTTCTCCAGGAGG...CTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCAGCCACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371432.7
ENST00000647337.2
CDS-3UTR CAA 90 bp TACTGTAACTTTAATTGCTCTGTGATAGGTAGCTACTTGGGGAGGATTTGTGAACCTCCTGGAGAAAGTTaGCACCGCACTTGTGGTTCT +
Preference number: 5 (lower is better)
Translates to: YCNFNCSVIGSYLGRICEPPGES*HRTCGS
Trigger: AGAACCACAAGTGCGGTGCAAACTTTCTCCAGGAGG...TTCACAAATCCTCCCCAAGTAGCTACCTATCACAGAGCAATTAAAGTTACAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR CAA 90 bp GTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAACTGGTTTGTTGAACCTTGCTACTaGGTTTTTCATAACAGCAGA +
Preference number: 5 (lower is better)
Translates to: VMEASILPHVPLVHLNWFVEPCY*VFHNSR
Trigger: TCTGCTGTTATGAAAAACCAAGTAGCAAGGTTCAAC...AAACCAGTTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp TGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAGAACCACGGTGATAGGTAGCTACTaGGGGAGGATTTGTGAAGAC +
Preference number: 5 (lower is better)
Translates to: CIEKTANSSNVCATKRTTVIGSY*GRICED
Trigger: GTCTTCACAAATCCTCCCCAAGTAGCTACCTATCAC...CGTGGTTCTCTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp CTTGAGCCTTCTGCTTCTCAATATCTACCCTCTTATGGCTGCAAGATCATGACTGTCCACCTCTCTGAATaGGCATATGAACAGGTTATT +
Preference number: 5 (lower is better)
Translates to: LEPSASQYLPSYGCKIMTVHLSE*AYEQVI
Trigger: AATAACCTGTTCATATGCCAATTCAGAGAGGTGGAC...AGTCATGATCTTGCAGCCATAAGAGGGTAGATATTGAGAAGCAGAAGGCTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp ATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCTAATGGTGTGGACTTCTCTGTCCACCTCTCTGAATaGGCATATGAACAGGTTATT +
Preference number: 5 (lower is better)
Translates to: ISSLLNLSQMVPNGVDFSVHLSE*AYEQVI
Trigger: AATAACCTGTTCATATGCCAATTCAGAGAGGTGGAC...AGAGAAGTCCACACCATTAGGGACCATCTGTGATAAATTCAGAAGGGAGGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp CTGAATGATGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGGTCCACCTCTCTGAATaGGCATATGAACAGGTTATT +
Preference number: 5 (lower is better)
Translates to: LNDGTVMEASILPHVPLVVHLSE*AYEQVI
Trigger: AATAACCTGTTCATATGCCAATTCAGAGAGGTGGAC...CACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCATCATTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp AATAGGATGCAGCTGGCACTGGCGGTAGCATTTTTATGTCAATTAATTAAAATTAGCCCCTTGCCCTCCTaGGCCCTCCATTGTAAGAAA +
Preference number: 5 (lower is better)
Translates to: NRMQLALAVAFLCQLIKISPLPS*ALHCKK
Trigger: TTTCTTACAATGGAGGGCCAAGGAGGGCAAGGGGCT...AATTTTAATTAATTGACATAAAAATGCTACCGCCAGTGCCAGCTGCATCCTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp TGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAAATTAAGGATTTGCACTaGGAAATCTGCCATGTGACT +
Preference number: 5 (lower is better)
Translates to: WYCDGSIHSTSCPFSAPQIKDLH*EICHVT
Trigger: AGTCACATGGCAGATTTCCAAGTGCAAATCCTTAAT...TTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp AATCATGACCTGTGGCACAAAGCGGAATTTTTACAATATGTGCATGGAAAGCAATCTGCTAAATTCTGCTaGGGTGGGTGGAGGATTCCA +
Preference number: 5 (lower is better)
Translates to: NHDLWHKAEFLQYVHGKQSAKFC*GGWRIP
Trigger: TGGAATCCTCCACCCACCCAAGCAGAATTTAGCAGA...TTGCTTTCCATGCACATATTGTAAAAATTCCGCTTTGTGCCACAGGTCATGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp TGCTATTTGCTTGAGAAACAAAGCCTTCCCTCCTCCCAAGTTGAAAGAAATAAATCTGCTAAATTCTGCTaGGGTGGGTGGAGGATTCCA +
Preference number: 5 (lower is better)
Translates to: CYLLEKQSLPSSQVERNKSAKFC*GGWRIP
Trigger: TGGAATCCTCCACCCACCCAAGCAGAATTTAGCAGA...TTTATTTCTTTCAACTTGGGAGGAGGGAAGGCTTTGTTTCTCAAGCAAATAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR CAA 90 bp TCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCCTTTCCTCGGAATTGAGAAGGCAAAGTGTTTaGCTTTCCCATCCATTTTTA +
Preference number: 5 (lower is better)
Translates to: SCFHVLTWILGQSLSSELRRQSV*LSHPFL
Trigger: TAAAAATGGATGGGAAAGCAAAACACTTTGCCTTCT...CAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp CTTGAGCCTTCTGCTTCTCAATATCTACCCTCTTATGGCTGCAAGATCATGACTACGATAGTTAATCTGTaGAGTTTCTCAGTTCTGGGC +
Preference number: 5 (lower is better)
Translates to: LEPSASQYLPSYGCKIMTTIVNL*SFSVLG
Trigger: GCCCAGAACTGAGAAACTCAACAGATTAACTATCGT...AGTCATGATCTTGCAGCCATAAGAGGGTAGATATTGAGAAGCAGAAGGCTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp TCCTTAAAGCTGTACACACATCTCCTCCCTTCTGAATTTATCACAGATGGTCCCATCCCAAAAGAAGTTTaGCTGACATGGTGTCACTGT +
Preference number: 5 (lower is better)
Translates to: SLKLYTHLLPSEFITDGPIPKEV*LTWCHC
Trigger: ACAGTGACACCATGTCAGCAAAACTTCTTTTGGGAT...GGGACCATCTGTGATAAATTCAGAAGGGAGGAGATGTGTGTACAGCTTTAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371432.7
ENST00000371438.5
ENST00000647337.2
CDS-3UTR CAA 90 bp CTGAATGATGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGTTCCCTCCTCCCAAGTaGAAAGAAATAAAGGAGTCT +
Preference number: 5 (lower is better)
Translates to: LNDGTVMEASILPHVPLVFPPPK*KEIKES
Trigger: AGACTCCTTTATTTCTTTCAACTTGGGAGGAGGGAA...CACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCATCATTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS GCA 90 bp CTCTGGACTTCAGTTCCTCACCTAGTGCATATAACTGAGCACATTTaGTATATGCTCTTTATCACAGCTCCTTTGAATAACCTGTACTGG +
Preference number: 5 (lower is better)
Translates to: LWTSVPHLVHITEHI*YMLFITAPLNNLYW
Trigger: CCAGTACAGGTTATTCAAAGGAGCTGTGATAAAGAGCATATAGCAAATGTGCTCAGTTATATGCACTAGGTGAGGAACTGAAGTCCAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473041.1
CDS-3UTR CAA 90 bp TGGTACTGTGATGGAAGCATCCATTCTACCTCATGTCCCTTTAGTGCACCTCAATGGCGATTTAGAGTTTaGCTTAACTATGAAACCACA +
Preference number: 5 (lower is better)
Translates to: WYCDGSIHSTSCPFSAPQWRFRV*LNYETT
Trigger: TGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCA...TTGAGGTGCACTAAAGGGACATGAGGTAGAATGGATGCTTCCATCACAGTACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp AAATTAGAAAACCACATCACTCCAGCATTTCATGCTGATAAAGGGCTAAAGGTTATTGGGGTTCCCCTGTaGTGTTGTTTGGTAAGGCTG +
Preference number: 5 (lower is better)
Translates to: KLENHITPAFHADKGLKVIGVPL*CCLVRL
Trigger: CAGCCTTACCAAACAACACAACAGGGGAACCCCAAT...AACCTTTAGCCCTTTATCAGCATGAAATGCTGGAGTGATGTGGTTTTCTAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp GCTTATTTATCTAAGCATACTTGGTATACGGCCTTTAGAAGGCAAAGTGTTTTGATTGGGGTTCCCCTGTaGTGTTGTTTGGTAAGGCTG +
Preference number: 5 (lower is better)
Translates to: AYLSKHTWYTAFRRQSVLIGVPL*CCLVRL
Trigger: CAGCCTTACCAAACAACACAACAGGGGAACCCCAAT...CAAAACACTTTGCCTTCTAAAGGCCGTATACCAAGTATGCTTAGATAAATAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp AATCATGACCTGTGGCACAAAGCGGAATTTTTACAATATGTGCATGGAAAGCAAACTTCTCTGCTCATTTaGAAAGGGCTCTGGCAAGTG +
Preference number: 5 (lower is better)
Translates to: NHDLWHKAEFLQYVHGKQTSLLI*KGLWQV
Trigger: CACTTGCCAGAGCCCTTTCAAAATGAGCAGAGAAGT...TTGCTTTCCATGCACATATTGTAAAAATTCCGCTTTGTGCCACAGGTCATGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp AAATGTGGCTGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGCAATCTGAAGCTCGATaGCAATTGTCTCTCTTGAGC +
Preference number: 5 (lower is better)
Translates to: KCGCIEKTANSSNVCATKQSEAR*QLSLLS
Trigger: GCTCAAGAGAGACAATTGCAATCGAGCTTCAGATTG...CTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCAGCCACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp AATCATGACCTGTGGCACAAAGCGGAATTTTTACAATATGTGCATGGAAAGCAACAATCTGAAGCTCGATaGCAATTGTCTCTCTTGAGC +
Preference number: 5 (lower is better)
Translates to: NHDLWHKAEFLQYVHGKQQSEAR*QLSLLS
Trigger: GCTCAAGAGAGACAATTGCAATCGAGCTTCAGATTG...TTGCTTTCCATGCACATATTGTAAAAATTCCGCTTTGTGCCACAGGTCATGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp ACTTTTGCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCTGGCGATTTAGAGTTTaGCTTAACTATGAAACCACA +
Preference number: 5 (lower is better)
Translates to: TFANASCFHVLTWILGQSWRFRV*LNYETT
Trigger: TGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCA...GGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGCAAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp AAATTAGAAAACCACATCACTCCAGCATTTCATGCTGATAAAGGGCTAAAGGTTCCTACAAAGGTGGGTTaGAGAAGGACCAGAGAACAA +
Preference number: 5 (lower is better)
Translates to: KLENHITPAFHADKGLKVPTKVG*RRTREQ
Trigger: TTGTTCTCTGGTCCTTCTCAAACCCACCTTTGTAGG...AACCTTTAGCCCTTTATCAGCATGAAATGCTGGAGTGATGTGGTTTTCTAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp GCTTATTTATCTAAGCATACTTGGTATACGGCCTTTAGAAGGCAAAGTGTTTTGCCTACAAAGGTGGGTTaGAGAAGGACCAGAGAACAA +
Preference number: 5 (lower is better)
Translates to: AYLSKHTWYTAFRRQSVLPTKVG*RRTREQ
Trigger: TTGTTCTCTGGTCCTTCTCAAACCCACCTTTGTAGG...CAAAACACTTTGCCTTCTAAAGGCCGTATACCAAGTATGCTTAGATAAATAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp TGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAGAACCACGGGAGGGAAGAAGTGCTaGAATTTTTCCCAAGGAAAA +
Preference number: 5 (lower is better)
Translates to: CIEKTANSSNVCATKRTTGGKKC*NFSQGK
Trigger: TTTTCCTTGGGAAAAATTCAAGCACTTCTTCCCTCC...CGTGGTTCTCTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp ACTTTTGCTAATGCTTCGTGTTTCCATGTATTAACCTGGATTCTGGGCCAGTCCAAAAATGTGGCTGCATaGAAAAGACTGCAAATTCCA +
Preference number: 5 (lower is better)
Translates to: TFANASCFHVLTWILGQSKNVAA*KRLQIP
Trigger: TGGAATTTGCAGTCTTTTCAATGCAGCCACATTTTT...GGACTGGCCCAGAATCCAGGTTAATACATGGAAACACGAAGCATTAGCAAAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp CTTTGCTTTGGTCTTGAAATCACAAATCAAACACATGACCCAGTGCAAATTAAGACTTCTCTGCTCATTTaGAAAGGGCTCTGGCAAGTG +
Preference number: 5 (lower is better)
Translates to: LCFGLEITNQTHDPVQIKTSLLI*KGLWQV
Trigger: CACTTGCCAGAGCCCTTTCAAAATGAGCAGAGAAGT...CTTAATTTGCACTGGGTCATGTGTTTGATTTGTGATTTCAAGACCAAAGCAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp TGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAGAACCACGATCCCAAAAGAAGTTTaGCTGACATGGTGTCACTGT +
Preference number: 5 (lower is better)
Translates to: CIEKTANSSNVCATKRTTIPKEV*LTWCHC
Trigger: ACAGTGACACCATGTCAGCAAAACTTCTTTTGGGAT...CGTGGTTCTCTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371432.7
ENST00000371438.5
ENST00000647337.2
CDS-3UTR CAA 90 bp TACTGTAACTTTAATTGCTCTGTGATAGGTAGCTACTTGGGGAGGATTTGTGAAACCCCAAAAGAAGTTTaGCTGACATGGTGTCACTGT +
Preference number: 5 (lower is better)
Translates to: YCNFNCSVIGSYLGRICETPKEV*LTWCHC
Trigger: ACAGTGACACCATGTCAGCAAAACTTCTTTTGGGGT...TTCACAAATCCTCCCCAAGTAGCTACCTATCACAGAGCAATTAAAGTTACAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS-3UTR CAA 90 bp TGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGAGAACCACGGTTGAACCTTGCTACTaGGTTTTTCATAACAGCAGA +
Preference number: 5 (lower is better)
Translates to: CIEKTANSSNVCATKRTTVEPCY*VFHNSR
Trigger: TCTGCTGTTATGAAAAACCAAGTAGCAAGGTTCAAC...CGTGGTTCTCTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp TGCTATTTGCTTGAGAAACAAAGCCTTCCCTCCTCCCAAGTTGAAAGAAATAAAGTCCACCTCTCTGAATaGGCATATGAACAGGTTATT +
Preference number: 5 (lower is better)
Translates to: CYLLEKQSLPSSQVERNKVHLSE*AYEQVI
Trigger: AATAACCTGTTCATATGCCAATTCAGAGAGGTGGAC...TTTATTTCTTTCAACTTGGGAGGAGGGAAGGCTTTGTTTCTCAAGCAAATAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646519.1
CDS-3UTR CAA 90 bp CTTTGCTTTGGTCTTGAAATCACAAATCAAACACATGACCCAGTGCAAATTAAGATCTCTGGTGCAATTTaGCTCTCCTGTACTAGGTGT +
Preference number: 5 (lower is better)
Translates to: LCFGLEITNQTHDPVQIKISGAI*LSCTRC
Trigger: ACACCTAGTACAGGAGAGCAAAATTGCACCAGAGAT...CTTAATTTGCACTGGGTCATGTGTTTGATTTGTGATTTCAAGACCAAAGCAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp TGCTATGAAGCCTGGCGATTTAGAGTTTTGCTTAACTATGAAACCACAGAACATGGAGGGAAGAAGTGCTaGAATTTTTCCCAAGGAAAA +
Preference number: 5 (lower is better)
Translates to: CYEAWRFRVLLNYETTEHGGKKC*NFSQGK
Trigger: TTTTCCTTGGGAAAAATTCAAGCACTTCTTCCCTCC...ATGTTCTGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCAGGCTTCATAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp TGCTATGAAGCCTGGCGATTTAGAGTTTTGCTTAACTATGAAACCACAGAACATACGATAGTTAATCTGTaGAGTTTCTCAGTTCTGGGC +
Preference number: 5 (lower is better)
Translates to: CYEAWRFRVLLNYETTEHTIVNL*SFSVLG
Trigger: GCCCAGAACTGAGAAACTCAACAGATTAACTATCGT...ATGTTCTGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCAGGCTTCATAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp TGCTATTTGCTTGAGAAACAAAGCCTTCCCTCCTCCCAAGTTGAAAGAAATAAATTTCCTGCTATTTGCTaGAGAAACAAAGCCTTCCCT +
Preference number: 5 (lower is better)
Translates to: CYLLEKQSLPSSQVERNKFPAIC*RNKAFP
Trigger: AGGGAAGGCTTTGTTTCTCAAGCAAATAGCAGGAAA...TTTATTTCTTTCAACTTGGGAGGAGGGAAGGCTTTGTTTCTCAAGCAAATAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000646519.1
CDS-3UTR CAA 90 bp TGCTATGAAGCCTGGCGATTTAGAGTTTTGCTTAACTATGAAACCACAGAACATGTTGAACCTTGCTACTaGGTTTTTCATAACAGCAGA +
Preference number: 5 (lower is better)
Translates to: CYEAWRFRVLLNYETTEHVEPCY*VFHNSR
Trigger: TCTGCTGTTATGAAAAACCAAGTAGCAAGGTTCAAC...ATGTTCTGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCAGGCTTCATAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp AATCATGACCTGTGGCACAAAGCGGAATTTTTACAATATGTGCATGGAAAGCAAACAAATCTCAGATCGTaGAACCTTGCTACTTGGTTT +
Preference number: 5 (lower is better)
Translates to: NHDLWHKAEFLQYVHGKQTNLRS*NLATWF
Trigger: AAACCAAGTAGCAAGGTTCAACGATCTGAGATTTGT...TTGCTTTCCATGCACATATTGTAAAAATTCCGCTTTGTGCCACAGGTCATGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp TGCTATTTGCTTGAGAAACAAAGCCTTCCCTCCTCCCAAGTTGAAAGAAATAAAACAAATCTCAGATCGTaGAACCTTGCTACTTGGTTT +
Preference number: 5 (lower is better)
Translates to: CYLLEKQSLPSSQVERNKTNLRS*NLATWF
Trigger: AAACCAAGTAGCAAGGTTCAACGATCTGAGATTTGT...TTTATTTCTTTCAACTTGGGAGGAGGGAAGGCTTTGTTTCTCAAGCAAATAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000646519.1
CDS-3UTR CAA 90 bp CTTTGCTTTGGTCTTGAAATCACAAATCAAACACATGACCCAGTGCAAATTAAGATCCCAAAAGAAGTTTaGCTGACATGGTGTCACTGT +
Preference number: 5 (lower is better)
Translates to: LCFGLEITNQTHDPVQIKIPKEV*LTWCHC
Trigger: ACAGTGACACCATGTCAGCAAAACTTCTTTTGGGAT...CTTAATTTGCACTGGGTCATGTGTTTGATTTGTGATTTCAAGACCAAAGCAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371432.7
ENST00000371438.5
ENST00000647337.2
CDS-3UTR CAA 90 bp CTTTGCTTTGGTCTTGAAATCACAAATCAAACACATGACCCAGTGCAAATTAAGGTTGAACCTTGCTACTaGGTTTTTCATAACAGCAGA +
Preference number: 5 (lower is better)
Translates to: LCFGLEITNQTHDPVQIKVEPCY*VFHNSR
Trigger: TCTGCTGTTATGAAAAACCAAGTAGCAAGGTTCAAC...CTTAATTTGCACTGGGTCATGTGTTTGATTTGTGATTTCAAGACCAAAGCAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp AAATGTGGCTGCATTGAAAAGACTGCAAATTCCAGCAATGTTTGTGCTACAAAGTGGCGATTTAGAGTTTaGCTTAACTATGAAACCACA +
Preference number: 5 (lower is better)
Translates to: KCGCIEKTANSSNVCATKWRFRV*LNYETT
Trigger: TGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCA...CTTTGTAGCACAAACATTGCTGGAATTTGCAGTCTTTTCAATGCAGCCACATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp TGCTATGAAGCCTGGCGATTTAGAGTTTTGCTTAACTATGAAACCACAGAACATAGAAGGCAAAGTGTTTaGCTTTCCCATCCATTTTTA +
Preference number: 5 (lower is better)
Translates to: CYEAWRFRVLLNYETTEHRRQSV*LSHPFL
Trigger: TAAAAATGGATGGGAAAGCAAAACACTTTGCCTTCT...ATGTTCTGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCAGGCTTCATAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp TGCTATGAAGCCTGGCGATTTAGAGTTTTGCTTAACTATGAAACCACAGAACATAAAAATGTGGCTGCATaGAAAAGACTGCAAATTCCA +
Preference number: 5 (lower is better)
Translates to: CYEAWRFRVLLNYETTEHKNVAA*KRLQIP
Trigger: TGGAATTTGCAGTCTTTTCAATGCAGCCACATTTTT...ATGTTCTGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCAGGCTTCATAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp CTTTGCTTTGGTCTTGAAATCACAAATCAAACACATGACCCAGTGCAAATTAAGCATGGAAAGCAATTCTaGGGCAATAGCAATTGGAAA +
Preference number: 5 (lower is better)
Translates to: LCFGLEITNQTHDPVQIKHGKQF*GNSNWK
Trigger: TTTCCAATTGCTATTGCCCAAGAATTGCTTTCCATG...CTTAATTTGCACTGGGTCATGTGTTTGATTTGTGATTTCAAGACCAAAGCAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp AAATTAGAAAACCACATCACTCCAGCATTTCATGCTGATAAAGGGCTAAAGGTTCATGGAAAGCAATTCTaGGGCAATAGCAATTGGAAA +
Preference number: 5 (lower is better)
Translates to: KLENHITPAFHADKGLKVHGKQF*GNSNWK
Trigger: TTTCCAATTGCTATTGCCCAAGAATTGCTTTCCATG...AACCTTTAGCCCTTTATCAGCATGAAATGCTGGAGTGATGTGGTTTTCTAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCATCCCAAAAGAAGTTTaGCTGACATGGTGTCACTGT +
Preference number: 5 (lower is better)
Translates to: HIYALSLYMYILIRVGCGIPKEV*LTWCHC
Trigger: ACAGTGACACCATGTCAGCAAAACTTCTTTTGGGAT...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000647337.2
CDS-3UTR CAA 90 bp AATAGGATGCAGCTGGCACTGGCGGTAGCATTTTTATGTCAATTAATTAAAATTGTTGAACCTTGCTACTaGGTTTTTCATAACAGCAGA +
Preference number: 5 (lower is better)
Translates to: NRMQLALAVAFLCQLIKIVEPCY*VFHNSR
Trigger: TCTGCTGTTATGAAAAACCAAGTAGCAAGGTTCAAC...AATTTTAATTAATTGACATAAAAATGCTACCGCCAGTGCCAGCTGCATCCTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp GCTTATTTATCTAAGCATACTTGGTATACGGCCTTTAGAAGGCAAAGTGTTTTGAAAAATGTGGCTGCATaGAAAAGACTGCAAATTCCA +
Preference number: 5 (lower is better)
Translates to: AYLSKHTWYTAFRRQSVLKNVAA*KRLQIP
Trigger: TGGAATTTGCAGTCTTTTCAATGCAGCCACATTTTT...CAAAACACTTTGCCTTCTAAAGGCCGTATACCAAGTATGCTTAGATAAATAAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS-3UTR CAA 90 bp CATATATATGCACTCTCTCTATATATGTATATATTGATACGTGTGGGATGTGGCTGGCGATTTAGAGTTTaGCTTAACTATGAAACCACA +
Preference number: 5 (lower is better)
Translates to: HIYALSLYMYILIRVGCGWRFRV*LNYETT
Trigger: TGTGGTTTCATAGTTAAGCAAAACTCTAAATCGCCA...GCCACATCCCACACGTATCAATATATACATATATAGAGAGAGTGCATATATATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371438.5
ENST00000646519.1
ENST00000647337.2
CDS CAA 90 bp TCCCTTGGGGCACCGCGTCCTGGGTGCGCTGGCGCCCCCTCCCAGTaGGAGTCCGGTGGTGAAGCGGTGTGGGTTCAGCAGTCCAGCCCC +
Preference number: 6 (lower is better)
Translates to: SLGAPRPGCAGAPSQ*ESGGEAVWVQQSSP
Trigger: GGGGCTGGACTGCTGAACCCACACCGCTTCACCACCGGACTCCAACTGGGAGGGGGCGCCAGCGCACCCAGGACGCGGTGCCCCAAGGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000646519.1
CDS CCA 72 bp TGGTCGGCGATGATCTCCACCATGGTGCGGTTGTCGTaGGGCGGCCGCAACCGGGGCACTGCAGCTGCCGCC +
Preference number: 6 (lower is better)
Translates to: WSAMISTMVRLS*GGRNRGTAAAA
Trigger: GGCGGCAGCTGCAGTGCCCCGGTTGCGGCCGCCCCACGACAACCGCACCATGGTGGAGATCATCGCCGACCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000478660.6
ENST00000576263.5
ENST00000625924.1
ENST00000646519.1
ENST00000647337.2
CDS CAA 72 bp GCACCGCGTCCTGGGTGCGCTGGCGCCCCCTCCCAGTaGGAGTCCGGTGGTGAAGCGGTGTGGGTTCAGCAG +
Preference number: 6 (lower is better)
Translates to: APRPGCAGAPSQ*ESGGEAVWVQQ
Trigger: CTGCTGAACCCACACCGCTTCACCACCGGACTCCAACTGGGAGGGGGCGCCAGCGCACCCAGGACGCGGTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000646519.1
CDS CAA 90 bp TGGCGGGTAGGGAGACCCGGGAGGCGCAGATCTTTGCCGGAGTCTTaGGAACACCCGGGGTGGCAGCTGCGAACGGGCGCGGGGGTGTGT +
Preference number: 6 (lower is better)
Translates to: WRVGRPGRRRSLPES*EHPGWQLRTGAGVC
Trigger: ACACACCCCCGCGCCCGTTCGCAGCTGCCACCCCGGGTGTTCCAAAGACTCCGGCAAAGATCTGCGCCTCCCGGGTCTCCCTACCCGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000646519.1
CDS CCA 72 bp CACCGCGTCCTGGGTGCGCTGGCGCCCCCTCCCAGTTaGAGTCCGGTGGTGAAGCGGTGTGGGTTCAGCAGT +
Preference number: 6 (lower is better)
Translates to: HRVLGALAPPPS*SPVVKRCGFSS
Trigger: ACTGCTGAACCCACACCGCTTCACCACCGGACTCCAACTGGGAGGGGGCGCCAGCGCACCCAGGACGCGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000646519.1
CDS CCA 72 bp GGAGACCCGGGAGGCGCAGATCTTTGCCGGAGTCTTTaGAACACCCGGGGTGGCAGCTGCGAACGGGCGCGG +
Preference number: 6 (lower is better)
Translates to: GDPGGADLCRSL*NTRGGSCERAR
Trigger: CCGCGCCCGTTCGCAGCTGCCACCCCGGGTGTTCCAAAGACTCCGGCAAAGATCTGCGCCTCCCGGGTCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000646519.1
CDS CAA 72 bp GGGAGACCCGGGAGGCGCAGATCTTTGCCGGAGTCTTaGGAACACCCGGGGTGGCAGCTGCGAACGGGCGCG +
Preference number: 6 (lower is better)
Translates to: GRPGRRRSLPES*EHPGWQLRTGA
Trigger: CGCGCCCGTTCGCAGCTGCCACCCCGGGTGTTCCAAAGACTCCGGCAAAGATCTGCGCCTCCCGGGTCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000646519.1
CDS CCA 72 bp CGCAGATCTTTGCCGGAGTCTTTGGAACACCCGGGGTaGCAGCTGCGAACGGGCGCGGGGGTGTGTTTGGCC +
Preference number: 6 (lower is better)
Translates to: RRSLPESLEHPG*QLRTGAGVCLA
Trigger: GGCCAAACACACCCCCGCGCCCGTTCGCAGCTGCCACCCCGGGTGTTCCAAAGACTCCGGCAAAGATCTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000646519.1
CDS GCA 72 bp TGCTGCTGCTGCTGTTGCTGCTGCTGCTGTTGCTGCTaGTGTTGCGCAGCCACCACCGGGCTCACGTCGCTC +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCC*CCAATTGLTSL
Trigger: GAGCGACGTGAGCCCGGTGGTGGCTGCGCAACAGCAGCAGCAACAGCAGCAGCAGCAACAGCAGCAGCAGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000478660.6
ENST00000576263.5
ENST00000625924.1
ENST00000646519.1
ENST00000647337.2
CDS GCA 72 bp TGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTGTTGCTaGTGCTGTTGCGCAGCCACCACCGGGCTCACGTCG +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCC*CCCAATTGLTS
Trigger: CGACGTGAGCCCGGTGGTGGCTGCGCAACAGCAGCAGCAACAGCAGCAGCAGCAACAGCAGCAGCAGCAGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000478660.6
ENST00000576263.5
ENST00000625924.1
ENST00000646519.1
ENST00000647337.2
CDS GCA 72 bp TGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTGTTaGTGCTGCTGTTGCGCAGCCACCACCGGGCTCACG +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCC*CCCCAATTGLT
Trigger: CGTGAGCCCGGTGGTGGCTGCGCAACAGCAGCAGCAACAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000478660.6
ENST00000576263.5
ENST00000625924.1
ENST00000646519.1
ENST00000647337.2
CDS CAA 90 bp CTGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTGTTGCTGCTGCTGTaGCGCAGCCACCACCGGGCTCACGTCGCTCATTTTGCCGGGCTG +
Preference number: 6 (lower is better)
Translates to: LLLLLLLLLLLLLLL*RSHHRAHVAHFAGL
Trigger: CAGCCCGGCAAAATGAGCGACGTGAGCCCGGTGGTGGCTGCGCAACAGCAGCAGCAACAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000478660.6
ENST00000576263.5
ENST00000625924.1
ENST00000646519.1
ENST00000647337.2
CDS CAA 72 bp TTGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTGTaGCTGCTGCTGTTGCGCAGCCACCACCGGGCTCAC +
Preference number: 6 (lower is better)
Translates to: LLLLLLLLLLLL*LLLLRSHHRAH
Trigger: GTGAGCCCGGTGGTGGCTGCGCAACAGCAGCAGCAACAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000478660.6
ENST00000576263.5
ENST00000625924.1
ENST00000646519.1
ENST00000647337.2
CDS CAA 90 bp CTGCTGCTGTTGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTGTaGCTGCTGCTGTTGCGCAGCCACCACCGGGCTCACGTCGCTCAT +
Preference number: 6 (lower is better)
Translates to: LLLLLLLLLLLLLLL*LLLLRSHHRAHVAH
Trigger: ATGAGCGACGTGAGCCCGGTGGTGGCTGCGCAACAGCAGCAGCAACAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAACAGCAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000478660.6
ENST00000576263.5
ENST00000625924.1
ENST00000646519.1
ENST00000647337.2
CDS GCA 72 bp TGCTGCTGTTGCTGCTGCTGCTGTTGCTGCTGCTGTTaGGCAGCCACCACCGGGCTCACGTCGCTCATTTTG +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCC*AATTGLTSLIL
Trigger: CAAAATGAGCGACGTGAGCCCGGTGGTGGCTGCGCAACAGCAGCAGCAACAGCAGCAGCAGCAACAGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000478660.6
ENST00000576263.5
ENST00000625924.1
ENST00000646519.1
ENST00000647337.2
CDS CAA 72 bp CTGCTGCTGTTGCTGCTGCTGCTGTTGCTGCTGCTGTaGCGCAGCCACCACCGGGCTCACGTCGCTCATTTT +
Preference number: 6 (lower is better)
Translates to: LLLLLLLLLLLL*RSHHRAHVAHF
Trigger: AAAATGAGCGACGTGAGCCCGGTGGTGGCTGCGCAACAGCAGCAGCAACAGCAGCAGCAGCAACAGCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000478660.6
ENST00000576263.5
ENST00000625924.1
ENST00000646519.1
ENST00000647337.2
CDS CCA 72 bp ATCGTTACCCGCCATGACAGTAACCACAGTCCCATCTaGTACCTCTCCGAGGGCTACCACCTTGAAGGCCAC +
Preference number: 6 (lower is better)
Translates to: IVTRHDSNHSPI*YLSEGYHLEGH
Trigger: GTGGCCTTCAAGGTGGTAGCCCTCGGAGAGGTACCAGATGGGACTGTGGTTACTGTCATGGCGGGTAACGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000359524.7
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000478660.6
ENST00000576263.5
ENST00000625924.1
ENST00000646519.1
ENST00000647337.2
CDS CCA 72 bp GGCTCCTCCGAGGAGAGGAACAAGGTGGTCGAAGACTaGGAGTCCAAGGTACTGGGCTCTGAATCTGAAATG +
Preference number: 6 (lower is better)
Translates to: GSSEERNKVVED*ESKVLGSESEM
Trigger: CATTTCAGATTCAGAGCCCAGTACCTTGGACTCCCAGTCTTCGACCACCTTGTTCCTCTCCTCGGAGGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576263.5
CDS CCA 72 bp ATCGTTACCCGCCATGACAGTAACCACAGTCCCATCTaGTACCTCTCCGAGGGCTACCACCCCAAAAGAAGT +
Preference number: 6 (lower is better)
Translates to: IVTRHDSNHSPI*YLSEGYHPKRS
Trigger: ACTTCTTTTGGGGTGGTAGCCCTCGGAGAGGTACCAGATGGGACTGTGGTTACTGTCATGGCGGGTAACGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483377.5
CDS CAA 72 bp GAAGCGCCGGCTGGTGCTCGGATCCCAAAAGAAGTTTaGCTGACATGGTGTCACTGTGCTGAAGAGGCTGTT +
Preference number: 6 (lower is better)
Translates to: EAPAGARIPKEV*LTWCHCAEEAV
Trigger: AACAGCCTCTTCAGCACAGTGACACCATGTCAGCAAAACTTCTTTTGGGATCCGAGCACCAGCCGGCGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000576263.5
ENST00000647337.2
CDS CAA 72 bp AATCAAAACCCGCAAGCCTGCTGGTGGAGCTTCAGCTaGTCAGTGATGCAACTCAGCGGAGTGAGTAACGGC +
Preference number: 6 (lower is better)
Translates to: NQNPQACWWSFS*SVMQLSGVSNG
Trigger: GCCGTTACTCACTCCGCTGAGTTGCATCACTGACAAGCTGAAGCTCCACCAGCAGGCTTGCGGGTTTTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478660.6
ENST00000646519.1
CDS TCA 72 bp CGCCGGCTGGTGCTCGGATCCCAAAAGAAGTTTTGCTaGCATGGTGTCACTGTGCTGAAGAGGCTGTTTGAT +
Preference number: 6 (lower is better)
Translates to: RRLVLGSQKKFC*HGVTVLKRLFD
Trigger: ATCAAACAGCCTCTTCAGCACAGTGACACCATGTCAGCAAAACTTCTTTTGGGATCCGAGCACCAGCCGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371432.7
ENST00000371436.10
ENST00000371438.5
ENST00000576263.5
ENST00000647337.2
CDS TCA 72 bp CTATTACTGCATAGACTGTGGTTAGAGAGCACTCACTaGCTCTGTTGGTCTCGGTGGCTGGTAGTGACCTGC +
Preference number: 6 (lower is better)
Translates to: LLLHRLWLESTH*LCWSRWLVVTC
Trigger: GCAGGTCACTACCAGCCACCGAGACCAACAGAGTCAGTGAGTGCTCTCTAACCACAGTCTATGCAGTAATAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371438.5
CDS TCA 72 bp ATATTACTGCATAGACTGTGGTTAGAGAGCACTCACTaGCTCTGTTGGTCTCGGTGGCTGGTAGTGACCTGC +
Preference number: 6 (lower is better)
Translates to: ILLHRLWLESTH*LCWSRWLVVTC
Trigger: GCAGGTCACTACCAGCCACCGAGACCAACAGAGTCAGTGAGTGCTCTCTAACCACAGTCTATGCAGTAATAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483243.5
CDS CCA 72 bp AACCATTTAAAAACCAGAGACTTCTTGCTGTCCTCCTaGAGAAAGTTTGCACCGCACTTGTGGTTCTGTGGT +
Preference number: 6 (lower is better)
Translates to: NHLKTRDFLLSS*RKFAPHLWFCG
Trigger: ACCACAGAACCACAAGTGCGGTGCAAACTTTCTCCAGGAGGACAGCAAGAAGTCTCTGGTTTTTAAATGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371432.7
ENST00000483243.5
ENST00000483377.5
ENST00000647337.2
CDS TCA 72 bp AGCACATTTGCTATATGCTCTTTATCACAGCTCCTTTaGATAACCTGTACTGGAATGGTCCAGAGGTTTTTC +
Preference number: 6 (lower is better)
Translates to: STFAICSLSQLL*ITCTGMVQRFF
Trigger: GAAAAACCTCTGGACCATTCCAGTACAGGTTATTCAAAGGAGCTGTGATAAAGAGCATATAGCAAATGTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473041.1
CDS CAA 72 bp GAGCACATTTGCTATATGCTCTTTATCACAGCTCCTTaGAATAACCTGTACTGGAATGGTCCAGAGGTTTTT +
Preference number: 6 (lower is better)
Translates to: EHICYMLFITAP*NNLYWNGPEVF
Trigger: AAAAACCTCTGGACCATTCCAGTACAGGTTATTCAAAGGAGCTGTGATAAAGAGCATATAGCAAATGTGCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473041.1
CDS GCA 72 bp TCAGTTCCTCACCTAGTGCATATAACTGAGCACATTTaGTATATGCTCTTTATCACAGCTCCTTTGAATAAC +
Preference number: 6 (lower is better)
Translates to: SVPHLVHITEHI*YMLFITAPLNN
Trigger: GTTATTCAAAGGAGCTGTGATAAAGAGCATATAGCAAATGTGCTCAGTTATATGCACTAGGTGAGGAACTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473041.1