Pregenerated sensors for RUNDC3B (Homo sapiens)
Ensembl gene IDs: ENSG00000105784Ensembl transcript IDs: ENST00000312373.12, ENST00000338056.7, ENST00000394654.3, ENST00000466676.5, ENST00000476114.5, ENST00000489461.5, ENST00000493037.5, ENST00000496000.1, ENST00000497788.5
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACAAGTATAGTACGCATCAAGGCAACAGAATACACATGGAAATATTaGCGTATAATTCAGCATTCTTTTGGAGGCAAGAGGGAGGGTGAA | + |
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Preference number: 1 (lower is better) Translates to: TSIVRIKATEYTWKY*RIIQHSFGGKREGE Trigger: TTCACCCTCCCTCTTGCCTCCAAAAGAATGCTGAATTATACGCCAATATTTCCATGTGTATTCTGTTGCCTTGATGCGTACTATACTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338056.7 |
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| 3UTR-3UTR TCA 90 bp | CTCCCAAAGTTTCCATTGTCCTCATATTATACCTACCTTCCATCCCCCATGCTGGCTATAAAACACACATaGCACACTTCATTGTTGCAC | + |
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Preference number: 2 (lower is better) Translates to: LPKFPLSSYYTYLPSPMLAIKHT*HTSLLH Trigger: GTGCAACAATGAAGTGTGTCATGTGTGTTTTATAGC...CAGCATGGGGGATGGAAGGTAGGTATAATATGAGGACAATGGAAACTTTGGGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000338056.7 |
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| 3UTR-3UTR TCA 90 bp | CTCCCAAAGTTTCCATTGTCCTCATATTATACCTACCTTCCATCCCCCATGCTGAATGAGACTCTGGTGTaGTTAATGATAGAGGCTATA | + |
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Preference number: 2 (lower is better) Translates to: LPKFPLSSYYTYLPSPMLNETLV*LMIEAI Trigger: TATAGCCTCTATCATTAATCACACCAGAGTCTCATT...CAGCATGGGGGATGGAAGGTAGGTATAATATGAGGACAATGGAAACTTTGGGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000338056.7 |
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| 3UTR-3UTR CCA 90 bp | AGCCACTGTGAAAATGCAGCTGAGAACTTTCCCGTTATTAAAAACAAGGCATTTTCAAAATCTCTTATCTaGAGGGGATTCTCTCCAAGC | + |
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Preference number: 2 (lower is better) Translates to: SHCENAAENFPVIKNKAFSKSLI*RGFSPS Trigger: GCTTGGAGAGAATCCCCTCCAGATAAGAGATTTTGA...AAATGCCTTGTTTTTAATAACGGGAAAGTTCTCAGCTGCATTTTCACAGTGGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENST00000338056.7 |
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| 3UTR-3UTR CCA 90 bp | AGCCACTGTGAAAATGCAGCTGAGAACTTTCCCGTTATTAAAAACAAGGCATTTCTTAGCTTAAGTCTCTaGAGTCTCTGGAATAAAACC | + |
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Preference number: 2 (lower is better) Translates to: SHCENAAENFPVIKNKAFLSLSL*SLWNKT Trigger: GGTTTTATTCCAGAGACTCCAGAGACTTAAGCTAAG...AAATGCCTTGTTTTTAATAACGGGAAAGTTCTCAGCTGCATTTTCACAGTGGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000338056.7 |
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| CDS-3UTR TCA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGACTCGCACCCGGGGACTaGCGGCTCGCCCTTGGCACC | + |
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Preference number: 4 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRLAPGD*RLALGT Trigger: GGTGCCAAGGGCGAGCCGTCAGTCCCCGGGTGCGAG...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000338056.7 ENST00000394654.3 ENST00000493037.5 |
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| CDS-3UTR CCA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGAGGCTCCGGGAGGCCATaGCGGGCTTACCCCCGTGCC | + |
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Preference number: 4 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRGSGRP*RAYPRA Trigger: GGCACGGGGGTAAGCCCGCCATGGCCTCCCGGAGCC...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000338056.7 ENST00000394654.3 ENST00000493037.5 |
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| CDS-3UTR GCA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGACGCTCAGGCTTTTCTTaGCGCCTCCGCCGCCACCGC | + |
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Preference number: 4 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRRSGFS*RLRRHR Trigger: GCGGTGGCGGCGGAGGCGGCAAGAAAAGCCTGAGCG...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000338056.7 ENST00000394654.3 ENST00000493037.5 |
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| CDS-3UTR CCA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGACTGACGGCTCGCCCTTaGCACCCGAGCTCCACACAC | + |
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Preference number: 4 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRLTARP*HPSSTH Trigger: GTGTGTGGAGCTCGGGTGCCAAGGGCGAGCCGTCAG...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000338056.7 ENST00000394654.3 ENST00000493037.5 |
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| CDS-3UTR CCA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGACTCGGTCCGCAACCGTaGGGGCGCGGGAAGGATGTA | + |
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Preference number: 4 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRLGPQP*GRGKDV Trigger: TACATCCTTCCCGCGCCCCCACGGTTGCGGACCGAG...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000338056.7 ENST00000394654.3 ENST00000493037.5 |
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| CDS-3UTR CCA 90 bp | TATTGCAGAAAACCACCACACTCCTACATTTCTAACACAAAGAATGAATGTGGTGGCTCCGGGAGGCCATaGCGGGCTTACCCCCGTGCC | + |
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Preference number: 4 (lower is better) Translates to: YCRKPPHSYISNTKNECGGSGRP*RAYPRA Trigger: GGCACGGGGGTAAGCCCGCCATGGCCTCCCGGAGCC...ACCACATTCATTCTTTGTGTTAGAAATGTAGGAGTGTGGTGGTTTTCTGCAATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000338056.7 |
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| CDS-3UTR TCA 90 bp | CCTCTCAAATCCTTAACTGAACTTGAACTCTTTCCTGGCAAAACAATTTTTCAACTCGCACCCGGGGACTaGCGGCTCGCCCTTGGCACC | + |
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Preference number: 4 (lower is better) Translates to: PLKSLTELELFPGKTIFQLAPGD*RLALGT Trigger: GGTGCCAAGGGCGAGCCGTCAGTCCCCGGGTGCGAG...TTGAAAAATTGTTTTGCCAGGAAAGAGTTCAAGTTCAGTTAAGGATTTGAGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000338056.7 |
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| CDS-3UTR GCA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGAGCGGGCTTACCCCCGTaGCCCTTTTGTCTCGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRAGLPP*PFCLVP Trigger: TGGCACGAGACAAAAGGGGCACGGGGGTAAGCCCGC...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000338056.7 ENST00000394654.3 ENST00000493037.5 |
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| CDS-3UTR CCA 90 bp | AGCCACTGTGAAAATGCAGCTGAGAACTTTCCCGTTATTAAAAACAAGGCATTTCTCGGTCCGCAACCGTaGGGGCGCGGGAAGGATGTA | + |
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Preference number: 4 (lower is better) Translates to: SHCENAAENFPVIKNKAFLGPQP*GRGKDV Trigger: TACATCCTTCCCGCGCCCCCACGGTTGCGGACCGAG...AAATGCCTTGTTTTTAATAACGGGAAAGTTCTCAGCTGCATTTTCACAGTGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000338056.7 |
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| CDS-3UTR GCA 90 bp | AGCCACTGTGAAAATGCAGCTGAGAACTTTCCCGTTATTAAAAACAAGGCATTTGCGGGCTTACCCCCGTaGCCCTTTTGTCTCGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SHCENAAENFPVIKNKAFAGLPP*PFCLVP Trigger: TGGCACGAGACAAAAGGGGCACGGGGGTAAGCCCGC...AAATGCCTTGTTTTTAATAACGGGAAAGTTCTCAGCTGCATTTTCACAGTGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000338056.7 |
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| CDS-3UTR GCA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGATCTCCACCGCAGCATTaGGGGCGCTCAGGCTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRSPPQH*GRSGFS Trigger: AGAAAAGCCTGAGCGCCCGCAATGCTGCGGTGGAGA...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000338056.7 ENST00000394654.3 ENST00000493037.5 |
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| CDS-3UTR CCA 90 bp | TATTGCAGAAAACCACCACACTCCTACATTTCTAACACAAAGAATGAATGTGGTCTGACGGCTCGCCCTTaGCACCCGAGCTCCACACAC | + |
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Preference number: 4 (lower is better) Translates to: YCRKPPHSYISNTKNECGLTARP*HPSSTH Trigger: GTGTGTGGAGCTCGGGTGCCAAGGGCGAGCCGTCAG...ACCACATTCATTCTTTGTGTTAGAAATGTAGGAGTGTGGTGGTTTTCTGCAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338056.7 |
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| CDS-3UTR TCA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGACCAAGGCAACAGCATTaGCATCCAGAGCTCCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRPRQQH*HPELLE Trigger: CTCCAGGAGCTCTGGATGTCAATGCTGTTGCCTTGG...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000338056.7 ENST00000394654.3 |
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| CDS-3UTR CCA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGACCTGGAGAAGGCCACTaGTTGGTGAGATGGGCAGTT | + |
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Preference number: 4 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRPGEGH*LVRWAV Trigger: AACTGCCCATCTCACCAACCAGTGGCCTTCTCCAGG...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000338056.7 ENST00000394654.3 |
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| CDS-3UTR CCA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGAGACATCCAGAGCTCCTaGAGAAGGCCACTGGTTGGT | + |
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Preference number: 4 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRDIQSS*RRPLVG Trigger: ACCAACCAGTGGCCTTCTCCAGGAGCTCTGGATGTC...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000338056.7 ENST00000394654.3 |
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| CDS-3UTR TCA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGATCCGGCAAGCCACTCTaGTATAGTCCCAGAAGCTAC | + |
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Preference number: 4 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRSGKPL*YSPRSY Trigger: GTAGCTTCTGGGACTATATCAGAGTGGCTTGCCGGA...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000338056.7 ENST00000394654.3 ENST00000493037.5 |
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| CDS-3UTR GCA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGATTACAGCAGGAAAACTaGCATCCAGCCCCTCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRLQQEN*HPAPLP Trigger: AGGGAGAGGGGCTGGATGGCAGTTTTCCTGCTGTAA...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000338056.7 ENST00000394654.3 ENST00000493037.5 |
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| CDS-3UTR GCA 90 bp | CTCCCAAAGTTTCCATTGTCCTCATATTATACCTACCTTCCATCCCCCATGCTGTGCTTTCGCTACCACTaGTTCCCAAAGTCCTTAGCT | + |
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Preference number: 4 (lower is better) Translates to: LPKFPLSSYYTYLPSPMLCFRYH*FPKSLA Trigger: AGCTAAGGACTTTGGGAAGCAGTGGTAGCGAAAGCA...CAGCATGGGGGATGGAAGGTAGGTATAATATGAGGACAATGGAAACTTTGGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000338056.7 |
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| CDS-3UTR TCA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGAAGGCAAGAGGGAGGGTaGACAATAAACACTACCACC | + |
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Preference number: 4 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRRQEGG*TINTTT Trigger: GGTGGTAGTGTTTATTGTTCACCCTCCCTCTTGCCT...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338056.7 |
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| CDS-3UTR TCA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGAAAGGCCACTGGTTGGTaGGATGGGCAGTTAACTCTT | + |
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Preference number: 4 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRKATGW*DGQLTL Trigger: AAGAGTTAACTGCCCATCTCACCAACCAGTGGCCTT...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000338056.7 ENST00000394654.3 |
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| CDS-3UTR CCA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGAAGGTCCGACATTCTCTaGAGTACTGCTTTCGCTACC | + |
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Preference number: 4 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRRSDIL*STAFAT Trigger: GGTAGCGAAAGCAGTACTCCAGAGAATGTCGGACCT...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000338056.7 ENST00000394654.3 ENST00000493037.5 |
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| CDS-3UTR CCA 90 bp | AGCCACTGTGAAAATGCAGCTGAGAACTTTCCCGTTATTAAAAACAAGGCATTTCCTGGAGAAGGCCACTaGTTGGTGAGATGGGCAGTT | + |
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Preference number: 4 (lower is better) Translates to: SHCENAAENFPVIKNKAFPGEGH*LVRWAV Trigger: AACTGCCCATCTCACCAACCAGTGGCCTTCTCCAGG...AAATGCCTTGTTTTTAATAACGGGAAAGTTCTCAGCTGCATTTTCACAGTGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000338056.7 |
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| CDS-3UTR TCA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGAGCAGATACAATTCTGTaGAACTTTCCGGCAAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRADTIL*NFPASH Trigger: GTGGCTTGCCGGAAAGTTTCACAGAATTGTATCTGC...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000338056.7 ENST00000394654.3 ENST00000493037.5 |
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| CDS-3UTR GCA 90 bp | CTCCCAAAGTTTCCATTGTCCTCATATTATACCTACCTTCCATCCCCCATGCTGATGTTTTTCCATGAGTaGTACTCTGATCCAGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: LPKFPLSSYYTYLPSPMLMFFHE*YSDPGS Trigger: AGAGCCTGGATCAGAGTAGCACTCATGGAAAAACAT...CAGCATGGGGGATGGAAGGTAGGTATAATATGAGGACAATGGAAACTTTGGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000338056.7 |
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| CDS-3UTR GCA 90 bp | CTCCCAAAGTTTCCATTGTCCTCATATTATACCTACCTTCCATCCCCCATGCTGGCCAGCAAGCATATTTaGTTCTTCACCCAAGACAAT | + |
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Preference number: 4 (lower is better) Translates to: LPKFPLSSYYTYLPSPMLASKHI*FFTQDN Trigger: ATTGTCTTGGGTGAAGAAGCAAATATGCTTGCTGGC...CAGCATGGGGGATGGAAGGTAGGTATAATATGAGGACAATGGAAACTTTGGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000338056.7 |
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| CDS-3UTR GCA 90 bp | AGCCACTGTGAAAATGCAGCTGAGAACTTTCCCGTTATTAAAAACAAGGCATTTTTACAGCAGGAAAACTaGCATCCAGCCCCTCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: SHCENAAENFPVIKNKAFLQQEN*HPAPLP Trigger: AGGGAGAGGGGCTGGATGGCAGTTTTCCTGCTGTAA...AAATGCCTTGTTTTTAATAACGGGAAAGTTCTCAGCTGCATTTTCACAGTGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENST00000338056.7 |
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| CDS-3UTR GCA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGATGCTTTCGCTACCACTaGTTCCCAAAGTCCTTAGCT | + |
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Preference number: 4 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRCFRYH*FPKSLA Trigger: AGCTAAGGACTTTGGGAAGCAGTGGTAGCGAAAGCA...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000338056.7 ENST00000394654.3 ENST00000493037.5 |
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| CDS-3UTR GCA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGACATTCTCTGGAGTACTaGTTTCGCTACCACTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRHSLEY*FRYHCF Trigger: GAAGCAGTGGTAGCGAAAGCAGTACTCCAGAGAATG...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000338056.7 ENST00000394654.3 ENST00000493037.5 |
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| CDS-3UTR GCA 90 bp | CCTCTCAAATCCTTAACTGAACTTGAACTCTTTCCTGGCAAAACAATTTTTCAATCTCCACCGCAGCATTaGGGGCGCTCAGGCTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: PLKSLTELELFPGKTIFQSPPQH*GRSGFS Trigger: AGAAAAGCCTGAGCGCCCGCAATGCTGCGGTGGAGA...TTGAAAAATTGTTTTGCCAGGAAAGAGTTCAAGTTCAGTTAAGGATTTGAGAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000338056.7 |
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| CDS-3UTR CCA 90 bp | CTCCCAAAGTTTCCATTGTCCTCATATTATACCTACCTTCCATCCCCCATGCTGTCAAAATCTCTTATCTaGAGGGGATTCTCTCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: LPKFPLSSYYTYLPSPMLSKSLI*RGFSPS Trigger: GCTTGGAGAGAATCCCCTCCAGATAAGAGATTTTGA...CAGCATGGGGGATGGAAGGTAGGTATAATATGAGGACAATGGAAACTTTGGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000338056.7 |
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| CDS-3UTR CCA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGACACTGGTTGGTGAGATaGGCAGTTAACTCTTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRHWLVR*AVNSCL Trigger: GAGACAAGAGTTAACTGCCCATCTCACCAACCAGTG...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000338056.7 ENST00000394654.3 |
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| CDS-3UTR TCA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGACCTCCTCATCACTGCTaGTACTATCAGAACTTTGGA | + |
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Preference number: 4 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRPPHHC*YYQNFG Trigger: TCCAAAGTTCTGATAGTATCAGCAGTGATGAGGAGG...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000338056.7 ENST00000394654.3 ENST00000493037.5 |
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| CDS-3UTR TCA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGATCCTTCTCCAGTTTATaGGCCAGATCGGAATCTTCA | + |
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Preference number: 4 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRSFSSL*ARSESS Trigger: TGAAGATTCCGATCTGGCTCATAAACTGGAGAAGGA...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000338056.7 ENST00000394654.3 ENST00000493037.5 |
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| CDS-3UTR TCA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGAGGATCTAGTGAAGTCTaGGAAAGGCTAACTTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRGSSEV*ERLTSA Trigger: AGCAGAAGTTAGCCTTTCTCAGACTTCACTAGATCC...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000338056.7 ENST00000394654.3 ENST00000493037.5 |
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| CDS-3UTR TCA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGACCTTTGTCCCTGAAGTaGCACTGTTTGACTGTCTTA | + |
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Preference number: 4 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRPLSLK*HCLTVL Trigger: TAAGACAGTCAAACAGTGTCACTTCAGGGACAAAGG...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338056.7 |
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| CDS-3UTR TCA 90 bp | CTCCCAAAGTTTCCATTGTCCTCATATTATACCTACCTTCCATCCCCCATGCTGGCATTTAGCAGCATGTaGAGATGCACAAATTACACA | + |
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Preference number: 4 (lower is better) Translates to: LPKFPLSSYYTYLPSPMLAFSSM*RCTNYT Trigger: TGTGTAATTTGTGCATCTTCACATGCTGCTAAATGC...CAGCATGGGGGATGGAAGGTAGGTATAATATGAGGACAATGGAAACTTTGGGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000338056.7 |
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| CDS-3UTR TCA 90 bp | AGCCACTGTGAAAATGCAGCTGAGAACTTTCCCGTTATTAAAAACAAGGCATTTAAGGCCACTGGTTGGTaGGATGGGCAGTTAACTCTT | + |
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Preference number: 4 (lower is better) Translates to: SHCENAAENFPVIKNKAFKATGW*DGQLTL Trigger: AAGAGTTAACTGCCCATCTCACCAACCAGTGGCCTT...AAATGCCTTGTTTTTAATAACGGGAAAGTTCTCAGCTGCATTTTCACAGTGGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000338056.7 |
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| CDS-3UTR TCA 90 bp | CCTCTCAAATCCTTAACTGAACTTGAACTCTTTCCTGGCAAAACAATTTTTCAACCAAGGCAACAGCATTaGCATCCAGAGCTCCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: PLKSLTELELFPGKTIFQPRQQH*HPELLE Trigger: CTCCAGGAGCTCTGGATGTCAATGCTGTTGCCTTGG...TTGAAAAATTGTTTTGCCAGGAAAGAGTTCAAGTTCAGTTAAGGATTTGAGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000338056.7 |
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| CDS-3UTR GCA 90 bp | CTCCCAAAGTTTCCATTGTCCTCATATTATACCTACCTTCCATCCCCCATGCTGCTAAGCTCTAAATATTaGAGAAAACCACCACACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPKFPLSSYYTYLPSPMLLSSKY*RKPPHS Trigger: GGAGTGTGGTGGTTTTCTGCAATATTTAGAGCTTAG...CAGCATGGGGGATGGAAGGTAGGTATAATATGAGGACAATGGAAACTTTGGGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000338056.7 |
||
| CDS-3UTR GCA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGAGATGAGCCAGCCATCTaGAACTTTGGGAAATCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRDEPAI*NFGKSL Trigger: AAGAGATTTCCCAAAGTTGCAGATGGCTGGCTCATC...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338056.7 |
||
| CDS-3UTR CCA 90 bp | CTCCCAAAGTTTCCATTGTCCTCATATTATACCTACCTTCCATCCCCCATGCTGCTTAGCTTAAGTCTCTaGAGTCTCTGGAATAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: LPKFPLSSYYTYLPSPMLLSLSL*SLWNKT Trigger: GGTTTTATTCCAGAGACTCCAGAGACTTAAGCTAAG...CAGCATGGGGGATGGAAGGTAGGTATAATATGAGGACAATGGAAACTTTGGGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000338056.7 |
||
| CDS-3UTR TCA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGACTCTCTTACACTTGTTaGACCAACTGTTCTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRLSYTC*TNCSHP Trigger: TGGATGAGAACAGTTGGTTCAACAAGTGTAAGAGAG...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000338056.7 ENST00000394654.3 ENST00000493037.5 |
||
| CDS-3UTR GCA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGAATGTTTTTCCATGAGTaGTACTCTGATCCAGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRMFFHE*YSDPGS Trigger: AGAGCCTGGATCAGAGTAGCACTCATGGAAAAACAT...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000338056.7 ENST00000394654.3 ENST00000493037.5 |
||
| CDS-3UTR TCA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGATGTTCCAGGGTAAGCTaGTACTTTTGTTTAACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRCSRVS*YFCLTL Trigger: GAGAGTTAAACAAAAGTATCAGCTTACCCTGGAACA...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000338056.7 ENST00000394654.3 ENST00000493037.5 |
||
| CDS-3UTR TCA 90 bp | AGCCACTGTGAAAATGCAGCTGAGAACTTTCCCGTTATTAAAAACAAGGCATTTTCCTTCTCCAGTTTATaGGCCAGATCGGAATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SHCENAAENFPVIKNKAFSFSSL*ARSESS Trigger: TGAAGATTCCGATCTGGCTCATAAACTGGAGAAGGA...AAATGCCTTGTTTTTAATAACGGGAAAGTTCTCAGCTGCATTTTCACAGTGGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000338056.7 |
||
| CDS-3UTR CCA 90 bp | CCTCTCAAATCCTTAACTGAACTTGAACTCTTTCCTGGCAAAACAATTTTTCAAAGGTCCGACATTCTCTaGAGTACTGCTTTCGCTACC | + |
|
Preference number: 4 (lower is better) Translates to: PLKSLTELELFPGKTIFQRSDIL*STAFAT Trigger: GGTAGCGAAAGCAGTACTCCAGAGAATGTCGGACCT...TTGAAAAATTGTTTTGCCAGGAAAGAGTTCAAGTTCAGTTAAGGATTTGAGAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000338056.7 |
||
| CDS-3UTR CCA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGAACAGATTCAGATAGTTaGTTCTCTCGAAGTCGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRTDSDS*FSRSRK Trigger: CTTACGACTTCGAGAGAACCAACTATCTGAATCTGT...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000338056.7 ENST00000394654.3 ENST00000493037.5 |
||
| CDS-3UTR CCA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGACTTAGCTTAAGTCTCTaGAGTCTCTGGAATAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRLSLSL*SLWNKT Trigger: GGTTTTATTCCAGAGACTCCAGAGACTTAAGCTAAG...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000338056.7 ENST00000394654.3 ENST00000493037.5 |
||
| CDS-3UTR TCA 90 bp | CCTCTCAAATCCTTAACTGAACTTGAACTCTTTCCTGGCAAAACAATTTTTCAAAACTGTTCTCATCCATaGGGAAAGGAGGTCCGACAT | + |
|
Preference number: 4 (lower is better) Translates to: PLKSLTELELFPGKTIFQNCSHP*GKEVRH Trigger: ATGTCGGACCTCCTTTCCTCATGGATGAGAACAGTT...TTGAAAAATTGTTTTGCCAGGAAAGAGTTCAAGTTCAGTTAAGGATTTGAGAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000338056.7 |
||
| CDS-3UTR TCA 90 bp | TATTGCAGAAAACCACCACACTCCTACATTTCTAACACAAAGAATGAATGTGGTGGATCTAGTGAAGTCTaGGAAAGGCTAACTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YCRKPPHSYISNTKNECGGSSEV*ERLTSA Trigger: AGCAGAAGTTAGCCTTTCTCAGACTTCACTAGATCC...ACCACATTCATTCTTTGTGTTAGAAATGTAGGAGTGTGGTGGTTTTCTGCAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338056.7 |
||
| CDS-3UTR TCA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGAAAGGAGGAAAAGTCATaGTCCTCAGATGTAATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRKEEKS*SSDVMF Trigger: AAACATTACATCTGAGGATCATGACTTTTCCTCCTT...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338056.7 |
||
| CDS-3UTR TCA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGAAAACTACCTTTAGTGTaGAACGAACTCTGTAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRKLPLV*NELCRN Trigger: GTTTCTACAGAGTTCGTTTCACACTAAAGGTAGTTT...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338056.7 |
||
| CDS-3UTR GCA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGACTCTGTTGTAGGACTTaGAAGGTAGTCATTAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRLCCRT*KVVIRF Trigger: AAATCTAATGACTACCTTGCAAGTCCTACAACAGAG...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000338056.7 ENST00000394654.3 ENST00000493037.5 |
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| 3UTR CAA 72 bp | AGTACGCATCAAGGCAACAGAATACACATGGAAATATaGGCGTATAATTCAGCATTCTTTTGGAGGCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: STHQGNRIHMEI*AYNSAFFWRQE Trigger: CTCTTGCCTCCAAAAGAATGCTGAATTATACGCCAATATTTCCATGTGTATTCTGTTGCCTTGATGCGTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338056.7 |
||
| CDS-3UTR TCA 90 bp | CCTCTCAAATCCTTAACTGAACTTGAACTCTTTCCTGGCAAAACAATTTTTCAACCTCCTCATCACTGCTaGTACTATCAGAACTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PLKSLTELELFPGKTIFQPPHHC*YYQNFG Trigger: TCCAAAGTTCTGATAGTATCAGCAGTGATGAGGAGG...TTGAAAAATTGTTTTGCCAGGAAAGAGTTCAAGTTCAGTTAAGGATTTGAGAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000338056.7 |
||
| CDS-3UTR TCA 90 bp | AGCCACTGTGAAAATGCAGCTGAGAACTTTCCCGTTATTAAAAACAAGGCATTTGCTATAAAACACACATaGCACACTTCATTGTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SHCENAAENFPVIKNKAFAIKHT*HTSLLH Trigger: GTGCAACAATGAAGTGTGTCATGTGTGTTTTATAGC...AAATGCCTTGTTTTTAATAACGGGAAAGTTCTCAGCTGCATTTTCACAGTGGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000338056.7 |
||
| CDS-3UTR GCA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGATTCACCCAAGACAATTaGTCCATCTTCATAAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRFTQDN*SIFIKS Trigger: AGATTTTATGAAGATGGAGCAATTGTCTTGGGTGAA...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000338056.7 ENST00000394654.3 ENST00000493037.5 |
||
| CDS-3UTR CCA 90 bp | CCTCTCAAATCCTTAACTGAACTTGAACTCTTTCCTGGCAAAACAATTTTTCAAAGCCATCTGCAACTTTaGGAAATCTCTTTTAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PLKSLTELELFPGKTIFQSHLQL*EISFSR Trigger: CCGGCTAAAAGAGATTTCCCAAAGTTGCAGATGGCT...TTGAAAAATTGTTTTGCCAGGAAAGAGTTCAAGTTCAGTTAAGGATTTGAGAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000338056.7 |
||
| CDS-3UTR TCA 90 bp | AGCCACTGTGAAAATGCAGCTGAGAACTTTCCCGTTATTAAAAACAAGGCATTTAATGAGACTCTGGTGTaGTTAATGATAGAGGCTATA | + |
|
Preference number: 4 (lower is better) Translates to: SHCENAAENFPVIKNKAFNETLV*LMIEAI Trigger: TATAGCCTCTATCATTAATCACACCAGAGTCTCATT...AAATGCCTTGTTTTTAATAACGGGAAAGTTCTCAGCTGCATTTTCACAGTGGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000338056.7 |
||
| CDS-3UTR CCA 90 bp | TATTGCAGAAAACCACCACACTCCTACATTTCTAACACAAAGAATGAATGTGGTACAGATTCAGATAGTTaGTTCTCTCGAAGTCGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: YCRKPPHSYISNTKNECGTDSDS*FSRSRK Trigger: CTTACGACTTCGAGAGAACCAACTATCTGAATCTGT...ACCACATTCATTCTTTGTGTTAGAAATGTAGGAGTGTGGTGGTTTTCTGCAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338056.7 |
||
| CDS-3UTR TCA 90 bp | CCTCTCAAATCCTTAACTGAACTTGAACTCTTTCCTGGCAAAACAATTTTTCAATGTTCCAGGGTAAGCTaGTACTTTTGTTTAACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PLKSLTELELFPGKTIFQCSRVS*YFCLTL Trigger: GAGAGTTAAACAAAAGTATCAGCTTACCCTGGAACA...TTGAAAAATTGTTTTGCCAGGAAAGAGTTCAAGTTCAGTTAAGGATTTGAGAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000338056.7 |
||
| CDS-3UTR TCA 90 bp | TATTGCAGAAAACCACCACACTCCTACATTTCTAACACAAAGAATGAATGTGGTGTTGAGAGTGGACCATaGATGATAAAGCATTTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: YCRKPPHSYISNTKNECGVESGP*MIKHLN Trigger: GTTTAAATGCTTTATCATTCATGGTCCACTCTCAAC...ACCACATTCATTCTTTGTGTTAGAAATGTAGGAGTGTGGTGGTTTTCTGCAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338056.7 |
||
| CDS-3UTR GCA 90 bp | CCTCTCAAATCCTTAACTGAACTTGAACTCTTTCCTGGCAAAACAATTTTTCAACTCTGTTGTAGGACTTaGAAGGTAGTCATTAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: PLKSLTELELFPGKTIFQLCCRT*KVVIRF Trigger: AAATCTAATGACTACCTTGCAAGTCCTACAACAGAG...TTGAAAAATTGTTTTGCCAGGAAAGAGTTCAAGTTCAGTTAAGGATTTGAGAGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000338056.7 |
||
| CDS-3UTR CCA 90 bp | CCTCTCAAATCCTTAACTGAACTTGAACTCTTTCCTGGCAAAACAATTTTTCAAAGATTGAGACATACATaGTTTCCTCATGCAAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: PLKSLTELELFPGKTIFQRLRHT*FPHANS Trigger: ACTGTTTGCATGAGGAAACCATGTATGTCTCAATCT...TTGAAAAATTGTTTTGCCAGGAAAGAGTTCAAGTTCAGTTAAGGATTTGAGAGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000338056.7 |
||
| CDS-3UTR GCA 90 bp | CCTCTCAAATCCTTAACTGAACTTGAACTCTTTCCTGGCAAAACAATTTTTCAATTCACCCAAGACAATTaGTCCATCTTCATAAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: PLKSLTELELFPGKTIFQFTQDN*SIFIKS Trigger: AGATTTTATGAAGATGGAGCAATTGTCTTGGGTGAA...TTGAAAAATTGTTTTGCCAGGAAAGAGTTCAAGTTCAGTTAAGGATTTGAGAGG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000338056.7 |
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| CDS TCA 90 bp | AGGGAGGAAGGGTGTGGAAGACAGCAGGGACTCGCACCCGGGGACTaGCGGCTCGCCCTTGGCACCCGAGCTCCACACACACACACACAC | + |
|
Preference number: 5 (lower is better) Translates to: REEGCGRQQGLAPGD*RLALGTRAPHTHTH Trigger: GTGTGTGTGTGTGTGTGGAGCTCGGGTGCCAAGGGCGAGCCGTCAGTCCCCGGGTGCGAGTCCCTGCTGTCTTCCACACCCTTCCTCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000338056.7 ENST00000476114.5 ENST00000493037.5 |
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| CDS CCA 90 bp | TGGAAGACAGCAGGGACTCGCACCCGGGGACTGACGGCTCGCCCTTaGCACCCGAGCTCCACACACACACACACACACACACACACACAC | + |
|
Preference number: 5 (lower is better) Translates to: WKTAGTRTRGLTARP*HPSSTHTHTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGAGCTCGGGTGCCAAGGGCGAGCCGTCAGTCCCCGGGTGCGAGTCCCTGCTGTCTTCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000338056.7 ENST00000476114.5 ENST00000493037.5 |
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| CDS TCA 90 bp | GGAGGAGCGTGGTGCCAGTGTAGAGTCTTTTCGCGTCCTGGGCCGTaGCTCCGGAATCGGGAGTCCGGGTCTGGGAATAGTAAGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GGAWCQCRVFSRPGP*LRNRESGSGNSKPR Trigger: CCTGGGCTTACTATTCCCAGACCCGGACTCCCGATTCCGGAGTCACGGCCCAGGACGCGAAAAGACTCTACACTGGCACCACGCTCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497788.5 |
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| CDS-3UTR CAA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGAACTGACGGCTCGCCCTaGGCACCCGAGCTCCACACA | + |
|
Preference number: 5 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRTDGSP*APELHT Trigger: TGTGTGGAGCTCGGGTGCCAAGGGCGAGCCGTCAGT...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000338056.7 ENST00000394654.3 ENST00000493037.5 |
||
| CDS-3UTR CAA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGACTCTCCACCGCAGCATaGCGGGCGCTCAGGCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRLSTAA*RALRLF Trigger: GAAAAGCCTGAGCGCCCGCAATGCTGCGGTGGAGAG...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000338056.7 ENST00000394654.3 ENST00000493037.5 |
||
| CDS-3UTR CAA 90 bp | AGCCACTGTGAAAATGCAGCTGAGAACTTTCCCGTTATTAAAAACAAGGCATTTACTGACGGCTCGCCCTaGGCACCCGAGCTCCACACA | + |
|
Preference number: 5 (lower is better) Translates to: SHCENAAENFPVIKNKAFTDGSP*APELHT Trigger: TGTGTGGAGCTCGGGTGCCAAGGGCGAGCCGTCAGT...AAATGCCTTGTTTTTAATAACGGGAAAGTTCTCAGCTGCATTTTCACAGTGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000338056.7 |
||
| CDS-3UTR CAA 90 bp | CTCCCAAAGTTTCCATTGTCCTCATATTATACCTACCTTCCATCCCCCATGCTGTCCAAGGCAACAGCATaGACATCCAGAGCTCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LPKFPLSSYYTYLPSPMLSKATA*TSRAPG Trigger: TCCAGGAGCTCTGGATGTCAATGCTGTTGCCTTGGA...CAGCATGGGGGATGGAAGGTAGGTATAATATGAGGACAATGGAAACTTTGGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000338056.7 |
||
| CDS-3UTR CAA 90 bp | TATTGCAGAAAACCACCACACTCCTACATTTCTAACACAAAGAATGAATGTGGTCTCTCCACCGCAGCATaGCGGGCGCTCAGGCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: YCRKPPHSYISNTKNECGLSTAA*RALRLF Trigger: GAAAAGCCTGAGCGCCCGCAATGCTGCGGTGGAGAG...ACCACATTCATTCTTTGTGTTAGAAATGTAGGAGTGTGGTGGTTTTCTGCAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000338056.7 |
||
| CDS-3UTR CAA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGAGGAGAAGGCCACTGGTaGGTGAGATGGGCAGTTAAC | + |
|
Preference number: 5 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRGEGHW*VRWAVN Trigger: GTTAACTGCCCATCTCACCAACCAGTGGCCTTCTCC...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000338056.7 ENST00000394654.3 |
||
| CDS-3UTR CAA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGATCCAAGGCAACAGCATaGACATCCAGAGCTCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRSKATA*TSRAPG Trigger: TCCAGGAGCTCTGGATGTCAATGCTGTTGCCTTGGA...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000338056.7 ENST00000394654.3 |
||
| CDS TCA 90 bp | CAATGCTGCAGATACAATTCTGTGAAACTTTCCGGCAAGCCACTCTaGTATAGTCCCAGAAGCTACGAGGACTTTCATAACCAAACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QCCRYNSVKLSGKPL*YSPRSYEDFHNQTR Trigger: CCTGGTTTGGTTATGAAAGTCCTCGTAGCTTCTGGGACTATATCAGAGTGGCTTGCCGGAAAGTTTCACAGAATTGTATCTGCAGCATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000312373.12 ENST00000338056.7 ENST00000394654.3 ENST00000466676.5 ENST00000476114.5 ENST00000489461.5 ENST00000493037.5 ENST00000497788.5 |
||
| CDS CCA 90 bp | GCATTGACATCCAGAGCTCCTGGAGAAGGCCACTGGTTGGTGAGATaGGCAGTTAACTCTTGTCTCGATCTTAAATCATTATTCTTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: ALTSRAPGEGHWLVR*AVNSCLDLKSLFFS Trigger: GCTAAAGAATAATGATTTAAGATCGAGACAAGAGTTAACTGCCCATCTCACCAACCAGTGGCCTTCTCCAGGAGCTCTGGATGTCAATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000338056.7 ENST00000394654.3 |
||
| CDS-3UTR CAA 90 bp | CTCCCAAAGTTTCCATTGTCCTCATATTATACCTACCTTCCATCCCCCATGCTGTGCCAGCAAGCATATTaGCTTCTTCACCCAAGACAA | + |
|
Preference number: 5 (lower is better) Translates to: LPKFPLSSYYTYLPSPMLCQQAY*LLHPRQ Trigger: TTGTCTTGGGTGAAGAAGCAAATATGCTTGCTGGCA...CAGCATGGGGGATGGAAGGTAGGTATAATATGAGGACAATGGAAACTTTGGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000338056.7 |
||
| CDS-3UTR CAA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGATGCCAGCAAGCATATTaGCTTCTTCACCCAAGACAA | + |
|
Preference number: 5 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRCQQAY*LLHPRQ Trigger: TTGTCTTGGGTGAAGAAGCAAATATGCTTGCTGGCA...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000338056.7 ENST00000394654.3 ENST00000493037.5 |
||
| CDS-3UTR CAA 90 bp | CTCCCAAAGTTTCCATTGTCCTCATATTATACCTACCTTCCATCCCCCATGCTGCTCCCAAAGTTTCCATaGTCCTCATATTATACCTAC | + |
|
Preference number: 5 (lower is better) Translates to: LPKFPLSSYYTYLPSPMLLPKFP*SSYYTY Trigger: GTAGGTATAATATGAGGACAATGGAAACTTTGGGAG...CAGCATGGGGGATGGAAGGTAGGTATAATATGAGGACAATGGAAACTTTGGGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000338056.7 |
||
| CDS-3UTR CAA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGAACTCTCTTACACTTGTaGAACCAACTGTTCTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRTLLHL*NQLFSS Trigger: GGATGAGAACAGTTGGTTCAACAAGTGTAAGAGAGT...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000338056.7 ENST00000394654.3 ENST00000493037.5 |
||
| CDS-3UTR CAA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGATTAGAGACTTGTAACTaGCCACTGACGTTAGAGATC | + |
|
Preference number: 5 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRLETCN*PLTLEI Trigger: GATCTCTAACGTCAGTGGCAAGTTACAAGTCTCTAA...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000338056.7 ENST00000394654.3 ENST00000493037.5 |
||
| CDS-3UTR CAA 90 bp | AGCCACTGTGAAAATGCAGCTGAGAACTTTCCCGTTATTAAAAACAAGGCATTTACCTTGAAGAGGTATTaGGAGATGAGCCAGCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: SHCENAAENFPVIKNKAFTLKRY*EMSQPS Trigger: AGATGGCTGGCTCATCTCCAAATACCTCTTCAAGGT...AAATGCCTTGTTTTTAATAACGGGAAAGTTCTCAGCTGCATTTTCACAGTGGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000338056.7 |
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| CDS-3UTR CAA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGACTTCACCCAAGACAATaGCTCCATCTTCATAAAATC | + |
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Preference number: 5 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRLHPRQ*LHLHKI Trigger: GATTTTATGAAGATGGAGCAATTGTCTTGGGTGAAG...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000338056.7 ENST00000394654.3 ENST00000493037.5 |
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| CDS-3UTR CAA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGACACAGTCAGCTGATCTaGAAGCTCCACAATTATATA | + |
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Preference number: 5 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRHSQLI*KLHNYI Trigger: TATATAATTGTGGAGCTTCAAGATCAGCTGACTGTG...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000338056.7 ENST00000394654.3 |
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| CDS-3UTR CAA 90 bp | AGCCACTGTGAAAATGCAGCTGAGAACTTTCCCGTTATTAAAAACAAGGCATTTACTCTCTTACACTTGTaGAACCAACTGTTCTCATCC | + |
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Preference number: 5 (lower is better) Translates to: SHCENAAENFPVIKNKAFTLLHL*NQLFSS Trigger: GGATGAGAACAGTTGGTTCAACAAGTGTAAGAGAGT...AAATGCCTTGTTTTTAATAACGGGAAAGTTCTCAGCTGCATTTTCACAGTGGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000338056.7 |
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| CDS-3UTR CAA 90 bp | CTCTTATCTGGAGGGGATTCTCTCCAAGCAATAGAATTTCAGACATGTACCAGATTAACTCTCTTACACTaGTTGAACCAACTGTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: LLSGGDSLQAIEFQTCTRLTLLH*LNQLFS Trigger: TGAGAACAGTTGGTTCAACAAGTGTAAGAGAGTTAA...TCTGGTACATGTCTGAAATTCTATTGCTTGGAGAGAATCCCCTCCAGATAAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000338056.7 ENST00000394654.3 ENST00000493037.5 |
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| CDS-3UTR CAA 90 bp | TATTGCAGAAAACCACCACACTCCTACATTTCTAACACAAAGAATGAATGTGGTCCAGGTTACTTGACCTaGAAGAGGTATTTGGAGATG | + |
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Preference number: 5 (lower is better) Translates to: YCRKPPHSYISNTKNECGPGYLT*KRYLEM Trigger: CATCTCCAAATACCTCTTCAAGGTCAAGTAACCTGG...ACCACATTCATTCTTTGTGTTAGAAATGTAGGAGTGTGGTGGTTTTCTGCAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338056.7 |
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| CDS-3UTR CAA 90 bp | AGCCACTGTGAAAATGCAGCTGAGAACTTTCCCGTTATTAAAAACAAGGCATTTCTTCACCCAAGACAATaGCTCCATCTTCATAAAATC | + |
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Preference number: 5 (lower is better) Translates to: SHCENAAENFPVIKNKAFLHPRQ*LHLHKI Trigger: GATTTTATGAAGATGGAGCAATTGTCTTGGGTGAAG...AAATGCCTTGTTTTTAATAACGGGAAAGTTCTCAGCTGCATTTTCACAGTGGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000338056.7 |
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| CDS-3UTR CAA 90 bp | TATTGCAGAAAACCACCACACTCCTACATTTCTAACACAAAGAATGAATGTGGTTTAGAGACTTGTAACTaGCCACTGACGTTAGAGATC | + |
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Preference number: 5 (lower is better) Translates to: YCRKPPHSYISNTKNECGLETCN*PLTLEI Trigger: GATCTCTAACGTCAGTGGCAAGTTACAAGTCTCTAA...ACCACATTCATTCTTTGTGTTAGAAATGTAGGAGTGTGGTGGTTTTCTGCAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338056.7 |
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| CDS-3UTR CAA 90 bp | TATTGCAGAAAACCACCACACTCCTACATTTCTAACACAAAGAATGAATGTGGTACCAAACCAGGTTACTaGACCTTGAAGAGGTATTTG | + |
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Preference number: 5 (lower is better) Translates to: YCRKPPHSYISNTKNECGTKPGY*TLKRYL Trigger: CAAATACCTCTTCAAGGTCAAGTAACCTGGTTTGGT...ACCACATTCATTCTTTGTGTTAGAAATGTAGGAGTGTGGTGGTTTTCTGCAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338056.7 |
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| CDS-3UTR CAA 90 bp | AGCCACTGTGAAAATGCAGCTGAGAACTTTCCCGTTATTAAAAACAAGGCATTTCACAGTCAGCTGATCTaGAAGCTCCACAATTATATA | + |
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Preference number: 5 (lower is better) Translates to: SHCENAAENFPVIKNKAFHSQLI*KLHNYI Trigger: TATATAATTGTGGAGCTTCAAGATCAGCTGACTGTG...AAATGCCTTGTTTTTAATAACGGGAAAGTTCTCAGCTGCATTTTCACAGTGGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000338056.7 |
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| CDS-3UTR CAA 90 bp | CCTCTCAAATCCTTAACTGAACTTGAACTCTTTCCTGGCAAAACAATTTTTCAACTGAAATCAATAGCATaGAGTCCTAGAAGCATGCCA | + |
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Preference number: 5 (lower is better) Translates to: PLKSLTELELFPGKTIFQLKSIA*SPRSMP Trigger: TGGCATGCTTCTAGGACTCAATGCTATTGATTTCAG...TTGAAAAATTGTTTTGCCAGGAAAGAGTTCAAGTTCAGTTAAGGATTTGAGAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000338056.7 |
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| CDS-3UTR CAA 90 bp | TATTGCAGAAAACCACCACACTCCTACATTTCTAACACAAAGAATGAATGTGGTTTAACTCTCTTACACTaGTTGAACCAACTGTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: YCRKPPHSYISNTKNECGLTLLH*LNQLFS Trigger: TGAGAACAGTTGGTTCAACAAGTGTAAGAGAGTTAA...ACCACATTCATTCTTTGTGTTAGAAATGTAGGAGTGTGGTGGTTTTCTGCAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338056.7 |
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| CDS TCA 72 bp | GGGTGTGGAAGACAGCAGGGACTCGCACCCGGGGACTaGCGGCTCGCCCTTGGCACCCGAGCTCCACACACA | + |
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Preference number: 6 (lower is better) Translates to: GCGRQQGLAPGD*RLALGTRAPHT Trigger: TGTGTGTGGAGCTCGGGTGCCAAGGGCGAGCCGTCAGTCCCCGGGTGCGAGTCCCTGCTGTCTTCCACACCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000338056.7 ENST00000394654.3 ENST00000476114.5 ENST00000493037.5 |
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| CDS CCA 72 bp | GCAGGGACTCGCACCCGGGGACTGACGGCTCGCCCTTaGCACCCGAGCTCCACACACACACACACACACACA | + |
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Preference number: 6 (lower is better) Translates to: AGTRTRGLTARP*HPSSTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTGGAGCTCGGGTGCCAAGGGCGAGCCGTCAGTCCCCGGGTGCGAGTCCCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000338056.7 ENST00000476114.5 ENST00000493037.5 |
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| CDS CAA 72 bp | AGCAGGGACTCGCACCCGGGGACTGACGGCTCGCCCTaGGCACCCGAGCTCCACACACACACACACACACAC | + |
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Preference number: 6 (lower is better) Translates to: SRDSHPGTDGSP*APELHTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGTGGAGCTCGGGTGCCAAGGGCGAGCCGTCAGTCCCCGGGTGCGAGTCCCTGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000338056.7 ENST00000476114.5 ENST00000493037.5 |
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| CDS CCA 72 bp | ACCTGCTTAAGGGGGTTCTCGCTCGGTCCGCAACCGTaGGGGCGCGGGAAGGATGTAGGAAAGGAGCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: TCLRGFSLGPQP*GRGKDVGKEPG Trigger: TCCAGGCTCCTTTCCTACATCCTTCCCGCGCCCCCACGGTTGCGGACCGAGCGAGAACCCCCTTAAGCAGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000338056.7 ENST00000394654.3 ENST00000476114.5 ENST00000493037.5 |
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| CDS CAA 90 bp | GTGGAAGACAGCAGGGACTCGCACCCGGGGACTGACGGCTCGCCCTaGGCACCCGAGCTCCACACACACACACACACACACACACACACA | + |
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Preference number: 6 (lower is better) Translates to: VEDSRDSHPGTDGSP*APELHTHTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGAGCTCGGGTGCCAAGGGCGAGCCGTCAGTCCCCGGGTGCGAGTCCCTGCTGTCTTCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000338056.7 ENST00000476114.5 ENST00000493037.5 |
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| CDS TCA 72 bp | TGGTGCCAGTGTAGAGTCTTTTCGCGTCCTGGGCCGTaGCTCCGGAATCGGGAGTCCGGGTCTGGGAATAGT | + |
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Preference number: 6 (lower is better) Translates to: WCQCRVFSRPGP*LRNRESGSGNS Trigger: ACTATTCCCAGACCCGGACTCCCGATTCCGGAGTCACGGCCCAGGACGCGAAAAGACTCTACACTGGCACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497788.5 |
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| CDS TCA 72 bp | GTTTTCGGTAAAGCAACGTATCCAAGGCAACAGCATTaGCATCCAGAGCTCCTGGAGAAGGCCACTGGTTGG | + |
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Preference number: 6 (lower is better) Translates to: VFGKATYPRQQH*HPELLEKATGW Trigger: CCAACCAGTGGCCTTCTCCAGGAGCTCTGGATGTCAATGCTGTTGCCTTGGATACGTTGCTTTACCGAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000338056.7 ENST00000394654.3 |
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| CDS CAA 72 bp | GCATTGACATCCAGAGCTCCTGGAGAAGGCCACTGGTaGGTGAGATGGGCAGTTAACTCTTGTCTCGATCTT | + |
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Preference number: 6 (lower is better) Translates to: ALTSRAPGEGHW*VRWAVNSCLDL Trigger: AAGATCGAGACAAGAGTTAACTGCCCATCTCACCAACCAGTGGCCTTCTCCAGGAGCTCTGGATGTCAATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000338056.7 ENST00000394654.3 |
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| CDS GCA 72 bp | TCCAGGCTCTACCCAAGCTCAACATCCCTTTTAGCTTaGCCTGTGCTCAGTCCATTGTTCCTTCTGAGTAAG | + |
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Preference number: 6 (lower is better) Translates to: SRLYPSSTSLLA*PVLSPLFLLSK Trigger: CTTACTCAGAAGGAACAATGGACTGAGCACAGGGCAAGCTAAAAGGGATGTTGAGCTTGGGTAGAGCCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496000.1 |
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| CDS CCA 72 bp | GTTCTCATCCATGAGGAAAGGAGGTCCGACATTCTCTaGAGTACTGCTTTCGCTACCACTGCTTCCCAAAGT | + |
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Preference number: 6 (lower is better) Translates to: VLIHEERRSDIL*STAFATTASQS Trigger: ACTTTGGGAAGCAGTGGTAGCGAAAGCAGTACTCCAGAGAATGTCGGACCTCCTTTCCTCATGGATGAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000312373.12 ENST00000338056.7 ENST00000394654.3 ENST00000493037.5 |
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| CDS CAA 72 bp | TCAACATCCCTTTTAGCTTGCCCTGTGCTCAGTCCATaGTTCCTTCTGAGTAAGCCTAGGGGAACCTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: STSLLACPVLSP*FLLSKPRGTCS Trigger: ACTGCAGGTTCCCCTAGGCTTACTCAGAAGGAACAATGGACTGAGCACAGGGCAAGCTAAAAGGGATGTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000496000.1 |
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| CDS CAA 90 bp | AAGGCAACAGCATTGACATCCAGAGCTCCTGGAGAAGGCCACTGGTaGGTGAGATGGGCAGTTAACTCTTGTCTCGATCTTAAATCATTA | + |
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Preference number: 6 (lower is better) Translates to: KATALTSRAPGEGHW*VRWAVNSCLDLKSL Trigger: TAATGATTTAAGATCGAGACAAGAGTTAACTGCCCATCTCACCAACCAGTGGCCTTCTCCAGGAGCTCTGGATGTCAATGCTGTTGCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000338056.7 ENST00000394654.3 |
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| CDS CCA 72 bp | TCCAGAGCTCCTGGAGAAGGCCACTGGTTGGTGAGATaGGCAGTTAACTCTTGTCTCGATCTTAAATCATTA | + |
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Preference number: 6 (lower is better) Translates to: SRAPGEGHWLVR*AVNSCLDLKSL Trigger: TAATGATTTAAGATCGAGACAAGAGTTAACTGCCCATCTCACCAACCAGTGGCCTTCTCCAGGAGCTCTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000338056.7 ENST00000394654.3 |
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| CDS TCA 72 bp | AGATACAATTCTGTGAAACTTTCCGGCAAGCCACTCTaGTATAGTCCCAGAAGCTACGAGGACTTTCATAAC | + |
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Preference number: 6 (lower is better) Translates to: RYNSVKLSGKPL*YSPRSYEDFHN Trigger: GTTATGAAAGTCCTCGTAGCTTCTGGGACTATATCAGAGTGGCTTGCCGGAAAGTTTCACAGAATTGTATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000312373.12 ENST00000338056.7 ENST00000394654.3 ENST00000466676.5 ENST00000476114.5 ENST00000489461.5 ENST00000493037.5 ENST00000497788.5 |
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| CDS CAA 90 bp | GAGTTCTTCAAGGTAACCCTTCTGTTCCAGGGTAAGCTGATACTTTaGTTTAACTCTCTTACACTTGTTGAACCAACTGTTCTCATCCAT | + |
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Preference number: 6 (lower is better) Translates to: EFFKVTLLFQGKLIL*FNSLTLVEPTVLIH Trigger: ATGGATGAGAACAGTTGGTTCAACAAGTGTAAGAGAGTTAAACAAAAGTATCAGCTTACCCTGGAACAGAAGGGTTACCTTGAAGAACTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000312373.12 ENST00000338056.7 ENST00000394654.3 ENST00000493037.5 |
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| CDS CAA 72 bp | AAGGTAACCCTTCTGTTCCAGGGTAAGCTGATACTTTaGTTTAACTCTCTTACACTTGTTGAACCAACTGTT | + |
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Preference number: 6 (lower is better) Translates to: KVTLLFQGKLIL*FNSLTLVEPTV Trigger: AACAGTTGGTTCAACAAGTGTAAGAGAGTTAAACAAAAGTATCAGCTTACCCTGGAACAGAAGGGTTACCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000312373.12 ENST00000338056.7 ENST00000394654.3 ENST00000493037.5 |
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| CDS CAA 90 bp | CTCTTGAAATTTCATCTAAAAGACACAGAAACTAGTAGCGGTGTCTaGAATCAAAAGGCTACAATTTCACCAATGAAGTCAAGAAAGTTG | + |
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Preference number: 6 (lower is better) Translates to: LLKFHLKDTETSSGV*NQKATISPMKSRKL Trigger: CAACTTTCTTGACTTCATTGGTGAAATTGTAGCCTTTTGATTCAAGACACCGCTACTAGTTTCTGTGTCTTTTAGATGAAATTTCAAGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000496000.1 |
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| CDS CAA 72 bp | TTTCATCTAAAAGACACAGAAACTAGTAGCGGTGTCTaGAATCAAAAGGCTACAATTTCACCAATGAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: FHLKDTETSSGV*NQKATISPMKS Trigger: TGACTTCATTGGTGAAATTGTAGCCTTTTGATTCAAGACACCGCTACTAGTTTCTGTGTCTTTTAGATGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000496000.1 |
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