RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RUFY4 (Homo sapiens)

Ensembl gene IDs: ENSG00000188282

Ensembl transcript IDs: ENST00000344321.8, ENST00000374155.7, ENST00000457754.6, ENST00000463618.6, ENST00000463872.1, ENST00000465568.5, ENST00000472496.1, ENST00000480164.5, ENST00000495721.1, ENST00000497857.5

Found 471 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGAGCAGGCCTCCACAGAGCCTGGAAGGCAGAGGCAGGAAAGCCTaGGGCGGCCTCTGCAGCTGGCACTTCCCCAAGTGGGCGCTGAGG +
Preference number: 1 (lower is better)
Translates to: QSRPPQSLEGRGRKA*GGLCSWHFPKWALR
Trigger: CCTCAGCGCCCACTTGGGGAAGTGCCAGCTGCAGAGGCCGCCCCAGGCTTTCCTGCCTCTGCCTTCCAGGCTCTGTGGAGGCCTGCTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374155.7
3UTR GCA 90 bp CCACAGAGCCTGGAAGGCAGAGGCAGGAAAGCCTGGGGCGGCCTCTaGAGCTGGCACTTCCCCAAGTGGGCGCTGAGGTCATGGAGTTCC +
Preference number: 1 (lower is better)
Translates to: PQSLEGRGRKAWGGL*SWHFPKWALRSWSS
Trigger: GGAACTCCATGACCTCAGCGCCCACTTGGGGAAGTGCCAGCTGCAGAGGCCGCCCCAGGCTTTCCTGCCTCTGCCTTCCAGGCTCTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374155.7
3UTR CCA 90 bp AGCCTGGAAGGCAGAGGCAGGAAAGCCTGGGGCGGCCTCTGCAGCTaGCACTTCCCCAAGTGGGCGCTGAGGTCATGGAGTTCCAGCATC +
Preference number: 1 (lower is better)
Translates to: SLEGRGRKAWGGLCS*HFPKWALRSWSSSI
Trigger: GATGCTGGAACTCCATGACCTCAGCGCCCACTTGGGGAAGTGCCAGCTGCAGAGGCCGCCCCAGGCTTTCCTGCCTCTGCCTTCCAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374155.7
3UTR GCA 90 bp ATCAGTTCCAACACCCGCCTCTTCATGGCCTGGACCAAGTCCCGCTaGCCTCCAAGCTCCTCCTGGTACATGGCATCCCTCCTCTCAGCC +
Preference number: 1 (lower is better)
Translates to: ISSNTRLFMAWTKSR*PPSSSWYMASLLSA
Trigger: GGCTGAGAGGAGGGATGCCATGTACCAGGAGGAGCTTGGAGGGCAGCGGGACTTGGTCCAGGCCATGAAGAGGCGGGTGTTGGAACTGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR CCA 90 bp CGGTCCTTCTCTTGGATCAGTTCCAACACCCGCCTCTTCATGGCCTaGACCAAGTCCCGCTGCCCTCCAAGCTCCTCCTGGTACATGGCA +
Preference number: 1 (lower is better)
Translates to: RSFSWISSNTRLFMA*TKSRCPPSSSWYMA
Trigger: TGCCATGTACCAGGAGGAGCTTGGAGGGCAGCGGGACTTGGTCCAGGCCATGAAGAGGCGGGTGTTGGAACTGATCCAAGAGAAGGACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR GCA 90 bp ATCTTGCTACAGGCCACACAGCACTCGGGAGCCATGGAAGAGAGATaGTGGAGCCTCTGCCACAGGCGGTCCTTCTCTTGGATCAGTTCC +
Preference number: 1 (lower is better)
Translates to: ILLQATQHSGAMEER*WSLCHRRSFSWISS
Trigger: GGAACTGATCCAAGAGAAGGACCGCCTGTGGCAGAGGCTCCAGCATCTCTCTTCCATGGCTCCCGAGTGCTGTGTGGCCTGTAGCAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR CCA 90 bp TTGCTACAGGCCACACAGCACTCGGGAGCCATGGAAGAGAGATGCTaGAGCCTCTGCCACAGGCGGTCCTTCTCTTGGATCAGTTCCAAC +
Preference number: 1 (lower is better)
Translates to: LLQATQHSGAMEERC*SLCHRRSFSWISSN
Trigger: GTTGGAACTGATCCAAGAGAAGGACCGCCTGTGGCAGAGGCTCCAGCATCTCTCTTCCATGGCTCCCGAGTGCTGTGTGGCCTGTAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR CCA 90 bp ATCGGCCAAAGATCTTGCTACAGGCCACACAGCACTCGGGAGCCATaGAAGAGAGATGCTGGAGCCTCTGCCACAGGCGGTCCTTCTCTT +
Preference number: 1 (lower is better)
Translates to: IGQRSCYRPHSTREP*KRDAGASATGGPSL
Trigger: AAGAGAAGGACCGCCTGTGGCAGAGGCTCCAGCATCTCTCTTCCATGGCTCCCGAGTGCTGTGTGGCCTGTAGCAAGATCTTTGGCCGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR GCA 90 bp CACAGAGCCTGCATGGATACCGCCGAGAAAATCGGCCAAAGATCTTaGTACAGGCCACACAGCACTCGGGAGCCATGGAAGAGAGATGCT +
Preference number: 1 (lower is better)
Translates to: HRACMDTAEKIGQRS*YRPHSTREPWKRDA
Trigger: AGCATCTCTCTTCCATGGCTCCCGAGTGCTGTGTGGCCTGTAGCAAGATCTTTGGCCGATTTTCTCGGCGGTATCCATGCAGGCTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR GCA 90 bp CGTTGTGGTAGTTGCAGGGCTGGAACCACTCCCCACACCCTACTCTaGCCACAGAAGTGCTGGTGCCTTAGATCTTCAGTGTCTAGAATG +
Preference number: 1 (lower is better)
Translates to: RCGSCRAGTTPHTLL*PQKCWCLRSSVSRM
Trigger: CATTCTAGACACTGAAGATCTAAGGCACCAGCACTTCTGTGGGCAGAGTAGGGTGTGGGGAGTGGTTCCAGCCCTGCAACTACCACAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
3UTR GCA 90 bp ACCTCGGCTTGCTCCTCCCTTCTGGCCACAAGGGTCACTTCTGTTTaGACTTGTGGATTCTCCACGGTAGAGTCTTCCTTTGTTGCGTGT +
Preference number: 1 (lower is better)
Translates to: TSACSSLLATRVTSV*TCGFSTVESSFVAC
Trigger: ACACGCAACAAAGGAAGACTCTACCGTGGAGAATCCACAAGTGCAAACAGAAGTGACCCTTGTGGCCAGAAGGGAGGAGCAAGCCGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR CCA 90 bp TTGCTCCTCCCTTCTGGCCACAAGGGTCACTTCTGTTTGCACTTGTaGATTCTCCACGGTAGAGTCTTCCTTTGTTGCGTGTCCCTGAAG +
Preference number: 1 (lower is better)
Translates to: LLLPSGHKGHFCLHL*ILHGRVFLCCVSLK
Trigger: CTTCAGGGACACGCAACAAAGGAAGACTCTACCGTGGAGAATCCACAAGTGCAAACAGAAGTGACCCTTGTGGCCAGAAGGGAGGAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR-3UTR GCA 90 bp TTGCTACAGGCCACACAGCACTCGGGAGCCATGGAAGAGAGATGCTGGAGCCTCTCCTGGCGCTGGGCCTaGTCCTCAGCCTTCCGGAGC +
Preference number: 2 (lower is better)
Translates to: LLQATQHSGAMEERCWSLSWRWA*SSAFRS
Trigger: GCTCCGGAAGGCTGAGGAGCAGGCCCAGCGCCAGGA...GAGGCTCCAGCATCTCTCTTCCATGGCTCCCGAGTGCTGTGTGGCCTGTAGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR-3UTR CCA 90 bp GCTGCCCTCCAAGCTCCTCCTGGTACATGGCATCCCTCCTCTCAGCCTCCTGTTTCCCTGGGCGCAGGGTaGGCAGCAGCGGTCTCTCTT +
Preference number: 2 (lower is better)
Translates to: AALQAPPGTWHPSSQPPVSLGAG*AAAVSL
Trigger: AAGAGAGACCGCTGCTGCCCACCCTGCGCCCAGGGA...AACAGGAGGCTGAGAGGAGGGATGCCATGTACCAGGAGGAGCTTGGAGGGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR-3UTR GCA 90 bp CTTCTCGTGAATCAGGAAAGGTGGGCACCGCTGCTGGGTGAGTGGGGAGTGTGGCCCCACACCCTACTCTaGCCACAGAAGTGCTGGTGC +
Preference number: 2 (lower is better)
Translates to: LLVNQERWAPLLGEWGVWPHTLL*PQKCWC
Trigger: GCACCAGCACTTCTGTGGGCAGAGTAGGGTGTGGGG...CCACACTCCCCACTCACCCAGCAGCGGTGCCCACCTTTCCTGATTCACGAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
3UTR-3UTR CCA 90 bp GTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGATGGGCTTCTCTTCCCTaGGCGCAGGGTGGGCAGCAG +
Preference number: 2 (lower is better)
Translates to: VRAAGVLSTVMDLLSPEGWASLP*AQGGQQ
Trigger: CTGCTGCCCACCCTGCGCCCAGGGAAGAGAAGCCCA...TCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
3UTR-3UTR GCA 90 bp CCGCCTCTTCATGGCCTGGACCAAGTCCCGCTGCCCTCCAAGCTCCTCCTGGTATGTTCTCTGACCCTCTaGAACCAGCAGAACCCCTGT +
Preference number: 2 (lower is better)
Translates to: PPLHGLDQVPLPSKLLLVCSLTL*NQQNPC
Trigger: ACAGGGGTTCTGCTGGTTGCAGAGGGTCAGAGAACA...TACCAGGAGGAGCTTGGAGGGCAGCGGGACTTGGTCCAGGCCATGAAGAGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR-3UTR CCA 90 bp CAGGCAGGTGGGAGGCCAGTCATGGGCTGGTCTTGGTCTTGGTCAGGTGACCTGCCAGCTGCTGTCCACTaGGTGCATCTTGCAGACAGA +
Preference number: 2 (lower is better)
Translates to: QAGGRPVMGWSWSWSGDLPAAVH*VHLADR
Trigger: TCTGTCTGCAAGATGCACCCAGTGGACAGCAGCTGG...CAGGTCACCTGACCAAGACCAAGACCAGCCCATGACTGGCCTCCCACCTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR-3UTR CCA 90 bp CTTCTCGTGAATCAGGAAAGGTGGGCACCGCTGCTGGGTGAGTGGGGAGTGTGGAGATGCCTTTGTTGCTaGGACCTGGGAAGCCCTGCC +
Preference number: 2 (lower is better)
Translates to: LLVNQERWAPLLGEWGVWRCLCC*DLGSPA
Trigger: GGCAGGGCTTCCCAGGTCCCAGCAACAAAGGCATCT...CCACACTCCCCACTCACCCAGCAGCGGTGCCCACCTTTCCTGATTCACGAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR-3UTR TCA 90 bp GCAGCGGTCTCTCTTCTTGTAATCCATGGAGCAAGCATGGCAGAGCAGGCCTCCTCCCCAAGTGGGCGCTaGGGTCATGGAGTTCCAGCA +
Preference number: 2 (lower is better)
Translates to: AAVSLLVIHGASMAEQASSPSGR*GHGVPA
Trigger: TGCTGGAACTCCATGACCTCAGCGCCCACTTGGGGA...GGAGGCCTGCTCTGCCATGCTTGCTCCATGGATTACAAGAAGAGAGACCGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374155.7
3UTR-3UTR GCA 90 bp GTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGAAAAGGTGGGCACCGCTaGTGGGTGAGTGGGGAGTGT +
Preference number: 2 (lower is better)
Translates to: VRAAGVLSTVMDLLSPEGKGGHR*WVSGEC
Trigger: ACACTCCCCACTCACCCAGCAGCGGTGCCCACCTTT...TCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
3UTR-3UTR GCA 90 bp CCCTTCTGGCTCCCACATGCTCTGGGGGTACCTATGTTTCCTGGAACTTTCCCCGGAAGCCCTGCCAGCTaGTGTCCACTGGGTGCATCT +
Preference number: 2 (lower is better)
Translates to: PFWLPHALGVPMFPGTFPGSPAS*CPLGAS
Trigger: AGATGCACCCAGTGGACAGCAGCTGGCAGGGCTTCC...GGGGAAAGTTCCAGGAAACATAGGTACCCCCAGAGCATGTGGGAGCCAGAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR-3UTR GCA 90 bp CTGCCCTCCAAGCTCCTCCTGGTACATGGCATCCCTCCTCTCAGCCTCCTGTTGGGAAGATGCCTTTGTTaGTGGGACCTGGGAAGCCCT +
Preference number: 2 (lower is better)
Translates to: LPSKLLLVHGIPPLSLLLGRCLC*WDLGSP
Trigger: AGGGCTTCCCAGGTCCCAGCAACAAAGGCATCTTCC...CAACAGGAGGCTGAGAGGAGGGATGCCATGTACCAGGAGGAGCTTGGAGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR-3UTR GCA 90 bp GTTCCAACACCCGCCTCTTCATGGCCTGGACCAAGTCCCGCTGCCCTCCAAGCTCTTCTGGCTCCCACATaGTCTGGGGGTACCTATGTT +
Preference number: 2 (lower is better)
Translates to: VPTPASSWPGPSPAALQALLAPT*SGGTYV
Trigger: AACATAGGTACCCCCAGAGCATGTGGGAGCCAGAAG...AGCTTGGAGGGCAGCGGGACTTGGTCCAGGCCATGAAGAGGCGGGTGTTGGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR-3UTR CCA 90 bp GTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGAGCTACGGGCAGGGAGTaGATTGAGTGGGATGGGCAG +
Preference number: 2 (lower is better)
Translates to: VRAAGVLSTVMDLLSPEGATGRE*IEWDGQ
Trigger: CTGCCCATCCCACTCAATCCACTCCCTGCCCGTAGC...TCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
3UTR-3UTR CCA 90 bp AGTCATGGATTTGCTGAGCCCAGAGGGACTTTAGAGAGGATGGGGCCCAACTCTTGGGCTTCTCTTCCCTaGGCGCAGGGTGGGCAGCAG +
Preference number: 2 (lower is better)
Translates to: SHGFAEPRGTLERMGPNSWASLP*AQGGQQ
Trigger: CTGCTGCCCACCCTGCGCCCAGGGAAGAGAAGCCCA...AGAGTTGGGCCCCATCCTCTCTAAAGTCCCTCTGGGCTCAGCAAATCCATGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
3UTR-3UTR CCA 90 bp CTGGGTGTTGAGTTCCCCAGGAAGATCTCAATCCATGGGGCTCTTTCCTCCTGGGCTACGGGCAGGGAGTaGATTGAGTGGGATGGGCAG +
Preference number: 2 (lower is better)
Translates to: LGVEFPRKISIHGALSSWATGRE*IEWDGQ
Trigger: CTGCCCATCCCACTCAATCCACTCCCTGCCCGTAGC...CCAGGAGGAAAGAGCCCCATGGATTGAGATCTTCCTGGGGAACTCAACACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR-3UTR CCA 90 bp TGTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGGACAAACAAGAGGGCTaGGAAGAGCTACGGGCAGGG +
Preference number: 2 (lower is better)
Translates to: CQGCWGLIHSHGFAEPRGDKQEG*EELRAG
Trigger: CCCTGCCCGTAGCTCTTCCCAGCCCTCTTGTTTGTC...CCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
3UTR-3UTR CCA 90 bp GGGTGGGCAGCAGCGGTCTCTCTTCTTGTAATCCATGGAGCAAGCATGGCAGAGGACAAACAAGAGGGCTaGGAAGAGCTACGGGCAGGG +
Preference number: 2 (lower is better)
Translates to: GWAAAVSLLVIHGASMAEDKQEG*EELRAG
Trigger: CCCTGCCCGTAGCTCTTCCCAGCCCTCTTGTTTGTC...CTCTGCCATGCTTGCTCCATGGATTACAAGAAGAGAGACCGCTGCTGCCCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
3UTR-3UTR CCA 90 bp CAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTTGGCACTTCCCCAAGTaGGCGCTGAGGTCATGGAGT +
Preference number: 2 (lower is better)
Translates to: QGCWGLIHSHGFAEPRGTWHFPK*ALRSWS
Trigger: ACTCCATGACCTCAGCGCCCACTTGGGGAAGTGCCA...AGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374155.7
3UTR-3UTR CCA 90 bp GTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGATCCATGGAGCAAGCATaGCAGAGCAGGCCTCCACAG +
Preference number: 2 (lower is better)
Translates to: VRAAGVLSTVMDLLSPEGSMEQA*QSRPPQ
Trigger: CTGTGGAGGCCTGCTCTGCCATGCTTGCTCCATGGA...TCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
3UTR-3UTR CCA 90 bp AGCAGCGGTCTCTCTTCTTGTAATCCATGGAGCAAGCATGGCAGAGCAGGCCTCCTTGGTCAGGTGACCTaGGCTTCTCTTCCCTGGGCG +
Preference number: 2 (lower is better)
Translates to: SSGLSSCNPWSKHGRAGLLGQVT*ASLPWA
Trigger: CGCCCAGGGAAGAGAAGCCCAGGTCACCTGACCAAG...GAGGCCTGCTCTGCCATGCTTGCTCCATGGATTACAAGAAGAGAGACCGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
3UTR-3UTR CCA 90 bp GCAGCGGTCTCTCTTCTTGTAATCCATGGAGCAAGCATGGCAGAGCAGGCCTCCTTTGTTGCTGGGACCTaGGAAGCCCTGCCAGCTGCT +
Preference number: 2 (lower is better)
Translates to: AAVSLLVIHGASMAEQASFVAGT*EALPAA
Trigger: AGCAGCTGGCAGGGCTTCCCAGGTCCCAGCAACAAA...GGAGGCCTGCTCTGCCATGCTTGCTCCATGGATTACAAGAAGAGAGACCGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR CAA 90 bp CCACAGAGCCTGCATGGATACCGCCGAGAAAATCGGCCAAAGATCTaGCTACAGGCCACACAGCACTCGGGAGCCATGGAAGAGAGATGC +
Preference number: 2 (lower is better)
Translates to: PQSLHGYRRENRPKI*LQATQHSGAMEERC
Trigger: GCATCTCTCTTCCATGGCTCCCGAGTGCTGTGTGGCCTGTAGCAAGATCTTTGGCCGATTTTCTCGGCGGTATCCATGCAGGCTCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR-3UTR TCA 90 bp TTGCTACAGGCCACACAGCACTCGGGAGCCATGGAAGAGAGATGCTGGAGCCTCAGGCTTCACTTCTCGTaGATCAGGAAAGGTGGGCAC +
Preference number: 2 (lower is better)
Translates to: LLQATQHSGAMEERCWSLRLHFS*IRKGGH
Trigger: GTGCCCACCTTTCCTGATTCACGAGAAGTGAAGCCT...GAGGCTCCAGCATCTCTCTTCCATGGCTCCCGAGTGCTGTGTGGCCTGTAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR-3UTR GCA 90 bp GTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTGCTGTCCACTGGGTaGATCTTGCAGACAGATGGC +
Preference number: 2 (lower is better)
Translates to: VRAAGVLSTVMDLLSPEGLLSTG*ILQTDG
Trigger: GCCATCTGTCTGCAAGATGCACCCAGTGGACAGCAG...TCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR-3UTR CCA 90 bp AGCAGCGGTCTCTCTTCTTGTAATCCATGGAGCAAGCATGGCAGAGCAGGCCTCGTGAATCAGGAAAGGTaGGCACCGCTGCTGGGTGAG +
Preference number: 2 (lower is better)
Translates to: SSGLSSCNPWSKHGRAGLVNQER*APLLGE
Trigger: CTCACCCAGCAGCGGTGCCCACCTTTCCTGATTCAC...GAGGCCTGCTCTGCCATGCTTGCTCCATGGATTACAAGAAGAGAGACCGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
3UTR-3UTR CCA 90 bp TGTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGTGGGCGCTGAGGTCATaGAGTTCCAGCATCTTCAGG +
Preference number: 2 (lower is better)
Translates to: CQGCWGLIHSHGFAEPRGWALRS*SSSIFR
Trigger: CCTGAAGATGCTGGAACTCCATGACCTCAGCGCCCA...CCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374155.7
3UTR-3UTR CCA 90 bp AGCTGCTGGAGAGTCCAAGATAGTGCAGGCTTCACTTCTCGTGAATCAGGAAAGTCCCTGGGCGCAGGGTaGGCAGCAGCGGTCTCTCTT +
Preference number: 2 (lower is better)
Translates to: SCWRVQDSAGFTSRESGKSLGAG*AAAVSL
Trigger: AAGAGAGACCGCTGCTGCCCACCCTGCGCCCAGGGA...CTTTCCTGATTCACGAGAAGTGAAGCCTGCACTATCTTGGACTCTCCAGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
3UTR-3UTR CCA 90 bp TGTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGGGCTCCCACATGCTCTaGGGGTACCTATGTTTCCTG +
Preference number: 2 (lower is better)
Translates to: CQGCWGLIHSHGFAEPRGGSHML*GYLCFL
Trigger: CAGGAAACATAGGTACCCCCAGAGCATGTGGGAGCC...CCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR-3UTR TCA 90 bp CACAGGCGGTCCTTCTCTTGGATCAGTTCCAACACCCGCCTCTTCATGGCCTGGCAGTCATGGATTTGCTaGGCCCAGAGGGACTTTAGA +
Preference number: 2 (lower is better)
Translates to: HRRSFSWISSNTRLFMAWQSWIC*AQRDFR
Trigger: TCTAAAGTCCCTCTGGGCTCAGCAAATCCATGACTG...CCAGGCCATGAAGAGGCGGGTGTTGGAACTGATCCAAGAGAAGGACCGCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR-3UTR TCA 90 bp GTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGAAGGCTTCACTTCTCGTaGATCAGGAAAGGTGGGCAC +
Preference number: 2 (lower is better)
Translates to: VRAAGVLSTVMDLLSPEGRLHFS*IRKGGH
Trigger: GTGCCCACCTTTCCTGATTCACGAGAAGTGAAGCCT...TCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
3UTR-3UTR TCA 90 bp ATGCTGGAGCCTCTGCCACAGGCGGTCCTTCTCTTGGATCAGTTCCAACACCCGGGCTTGACTGGTGTGTaGGTCCTCAATCTGGACATT +
Preference number: 2 (lower is better)
Translates to: MLEPLPQAVLLLDQFQHPGLTGV*VLNLDI
Trigger: AATGTCCAGATTGAGGACTCACACACCAGTCAAGCC...CGGGTGTTGGAACTGATCCAAGAGAAGGACCGCCTGTGGCAGAGGCTCCAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR-3UTR GCA 90 bp CTGCCCTCCAAGCTCCTCCTGGTACATGGCATCCCTCCTCTCAGCCTCCTGTTGCCACAGAAGTGCTGGTaGCTTAGATCTTCAGTGTCT +
Preference number: 2 (lower is better)
Translates to: LPSKLLLVHGIPPLSLLLPQKCW*LRSSVS
Trigger: AGACACTGAAGATCTAAGGCACCAGCACTTCTGTGG...CAACAGGAGGCTGAGAGGAGGGATGCCATGTACCAGGAGGAGCTTGGAGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR-3UTR GCA 90 bp AAATGTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAAAAGGTGGGCACCGCTaGTGGGTGAGTGGGGAGTGT +
Preference number: 2 (lower is better)
Translates to: KCQGCWGLIHSHGFAEPRKGGHR*WVSGEC
Trigger: ACACTCCCCACTCACCCAGCAGCGGTGCCCACCTTT...TCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGACATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
3UTR-3UTR CCA 90 bp CTGCCCTCCAAGCTCCTCCTGGTACATGGCATCCCTCCTCTCAGCCTCCTGTTGAAATGTCAGGGCTGCTaGGGTCTTATCCACAGTCAT +
Preference number: 2 (lower is better)
Translates to: LPSKLLLVHGIPPLSLLLKCQGC*GLIHSH
Trigger: ATGACTGTGGATAAGACCCCAGCAGCCCTGACATTT...CAACAGGAGGCTGAGAGGAGGGATGCCATGTACCAGGAGGAGCTTGGAGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR-3UTR CCA 90 bp TGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAGGGCTGGGAAGAGGCAGGAAAGCCTaGGGCGGCCTCTGCAGCTGG +
Preference number: 2 (lower is better)
Translates to: CLRSSVSRMRTGQTRGLGRGRKA*GGLCSW
Trigger: CCAGCTGCAGAGGCCGCCCCAGGCTTTCCTGCCTCT...TCCCAGCCCTCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374155.7
3UTR-3UTR CCA 90 bp TCCTCAGCCTTCCGGAGCCCAAGTCTGAGGCTCTTGATCTCGTCCTGCAGGGACGACAGATGGCTTGACTaGTGTGTGAGTCCTCAATCT +
Preference number: 2 (lower is better)
Translates to: SSAFRSPSLRLLISSCRDDRWLD*CVSPQS
Trigger: AGATTGAGGACTCACACACCAGTCAAGCCATCTGTC...GTCCCTGCAGGACGAGATCAAGAGCCTCAGACTTGGGCTCCGGAAGGCTGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR-3UTR CCA 90 bp CTGCCCTCCAAGCTCCTCCTGGTACATGGCATCCCTCCTCTCAGCCTCCTGTTGCATCTTGCAGACAGATaGCTTGACTGGTGTGTGAGT +
Preference number: 2 (lower is better)
Translates to: LPSKLLLVHGIPPLSLLLHLADR*LDWCVS
Trigger: ACTCACACACCAGTCAAGCCATCTGTCTGCAAGATG...CAACAGGAGGCTGAGAGGAGGGATGCCATGTACCAGGAGGAGCTTGGAGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR CAA 90 bp GGCTTGCTCCTCCCTTCTGGCCACAAGGGTCACTTCTGTTTGCACTaGTGGATTCTCCACGGTAGAGTCTTCCTTTGTTGCGTGTCCCTG +
Preference number: 2 (lower is better)
Translates to: GLLLPSGHKGHFCLH*WILHGRVFLCCVSL
Trigger: CAGGGACACGCAACAAAGGAAGACTCTACCGTGGAGAATCCACAAGTGCAAACAGAAGTGACCCTTGTGGCCAGAAGGGAGGAGCAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR CAA 90 bp CACCTCGGCTTGCTCCTCCCTTCTGGCCACAAGGGTCACTTCTGTTaGCACTTGTGGATTCTCCACGGTAGAGTCTTCCTTTGTTGCGTG +
Preference number: 2 (lower is better)
Translates to: HLGLLLPSGHKGHFC*HLWILHGRVFLCCV
Trigger: CACGCAACAAAGGAAGACTCTACCGTGGAGAATCCACAAGTGCAAACAGAAGTGACCCTTGTGGCCAGAAGGGAGGAGCAAGCCGAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR-3UTR TCA 90 bp AGCAGCGGTCTCTCTTCTTGTAATCCATGGAGCAAGCATGGCAGAGCAGGCCTCTTAGAGAAGAAGCCCTaGGCACTGAGAGCTTCGCCA +
Preference number: 2 (lower is better)
Translates to: SSGLSSCNPWSKHGRAGLLEKKP*ALRASP
Trigger: TGGCGAAGCTCTCAGTGCTCAGGGCTTCTTCTCTAA...GAGGCCTGCTCTGCCATGCTTGCTCCATGGATTACAAGAAGAGAGACCGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
3UTR-3UTR TCA 90 bp AAATGTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGACTGGGTGCTGGGTGTTaGGTTCCCCAGGAAGATCTC +
Preference number: 2 (lower is better)
Translates to: KCQGCWGLIHSHGFAEPRLGAGC*VPQEDL
Trigger: GAGATCTTCCTGGGGAACTCAACACCCAGCACCCAG...TCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGACATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR-3UTR GCA 90 bp AGCCATGGAAGAGAGATGCTGGAGCCTCTGCCACAGGCGGTCCTTCTCTTGGATGAGAAATGTCAGGGCTaGTGGGGTCTTATCCACAGT +
Preference number: 2 (lower is better)
Translates to: SHGREMLEPLPQAVLLLDEKCQG*WGLIHS
Trigger: ACTGTGGATAAGACCCCAGCAGCCCTGACATTTCTC...ATCCAAGAGAAGGACCGCCTGTGGCAGAGGCTCCAGCATCTCTCTTCCATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR-3UTR GCA 90 bp CACAGGCGGTCCTTCTCTTGGATCAGTTCCAACACCCGCCTCTTCATGGCCTGGAGGGTCACTTCTGTTTaGACTTGTGGATTCTCCACG +
Preference number: 2 (lower is better)
Translates to: HRRSFSWISSNTRLFMAWRVTSV*TCGFST
Trigger: CGTGGAGAATCCACAAGTGCAAACAGAAGTGACCCT...CCAGGCCATGAAGAGGCGGGTGTTGGAACTGATCCAAGAGAAGGACCGCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR-3UTR GCA 90 bp AAATGTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAAGATGCTGGAGCCTCTaGCACAGGCGGTCCTTCTCT +
Preference number: 2 (lower is better)
Translates to: KCQGCWGLIHSHGFAEPRRCWSL*HRRSFS
Trigger: AGAGAAGGACCGCCTGTGGCAGAGGCTCCAGCATCT...TCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGACATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR-3UTR CCA 90 bp TGTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGTGCCCACAGAAGTGCTaGTGCCTTAGATCTTCAGTG +
Preference number: 2 (lower is better)
Translates to: CQGCWGLIHSHGFAEPRGCPQKC*CLRSSV
Trigger: CACTGAAGATCTAAGGCACCAGCACTTCTGTGGGCA...CCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
3UTR-3UTR CCA 90 bp AAGTGCTGGTGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAGGCGGCCTCTGCAGCTaGCACTTCCCCAAGTGGGCG +
Preference number: 2 (lower is better)
Translates to: KCWCLRSSVSRMRTGQTRGGLCS*HFPKWA
Trigger: CGCCCACTTGGGGAAGTGCCAGCTGCAGAGGCCGCC...TCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCACCAGCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374155.7
3UTR-3UTR CCA 90 bp TCCTCAGCCTTCCGGAGCCCAAGTCTGAGGCTCTTGATCTCGTCCTGCAGGGACTCTTCTTGTAATCCATaGAGCAAGCATGGCAGAGCA +
Preference number: 2 (lower is better)
Translates to: SSAFRSPSLRLLISSCRDSSCNP*SKHGRA
Trigger: TGCTCTGCCATGCTTGCTCCATGGATTACAAGAAGA...GTCCCTGCAGGACGAGATCAAGAGCCTCAGACTTGGGCTCCGGAAGGCTGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR-3UTR CCA 90 bp AGTCATGGATTTGCTGAGCCCAGAGGGACTTTAGAGAGGATGGGGCCCAACTCTGTCATGGGCTGGTCTTaGTCTTGGTCAGGTGACCTG +
Preference number: 2 (lower is better)
Translates to: SHGFAEPRGTLERMGPNSVMGWS*SWSGDL
Trigger: CAGGTCACCTGACCAAGACCAAGACCAGCCCATGAC...AGAGTTGGGCCCCATCCTCTCTAAAGTCCCTCTGGGCTCAGCAAATCCATGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
3UTR-3UTR CCA 90 bp GGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTTTAAGGCCAGTCATGGGCTaGTCTTGGTCTTGGTCAGGT +
Preference number: 2 (lower is better)
Translates to: GCWGLIHSHGFAEPRGTLRPVMG*SWSWSG
Trigger: ACCTGACCAAGACCAAGACCAGCCCATGACTGGCCT...TAAAGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
3UTR-3UTR CCA 90 bp TCCTCAGCCTTCCGGAGCCCAAGTCTGAGGCTCTTGATCTCGTCCTGCAGGGACTTCTGTTTGCACTTGTaGATTCTCCACGGTAGAGTC +
Preference number: 2 (lower is better)
Translates to: SSAFRSPSLRLLISSCRDFCLHL*ILHGRV
Trigger: GACTCTACCGTGGAGAATCCACAAGTGCAAACAGAA...GTCCCTGCAGGACGAGATCAAGAGCCTCAGACTTGGGCTCCGGAAGGCTGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR-3UTR TCA 90 bp AGTCATGGATTTGCTGAGCCCAGAGGGACTTTAGAGAGGATGGGGCCCAACTCTAGGCTTCACTTCTCGTaGATCAGGAAAGGTGGGCAC +
Preference number: 2 (lower is better)
Translates to: SHGFAEPRGTLERMGPNSRLHFS*IRKGGH
Trigger: GTGCCCACCTTTCCTGATTCACGAGAAGTGAAGCCT...AGAGTTGGGCCCCATCCTCTCTAAAGTCCCTCTGGGCTCAGCAAATCCATGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
3UTR-3UTR GCA 90 bp TTCTGTTTGCACTTGTGGATTCTCCACGGTAGAGTCTTCCTTTGTTGCGTGTCCAAAGGTGGGCACCGCTaGTGGGTGAGTGGGGAGTGT +
Preference number: 2 (lower is better)
Translates to: FCLHLWILHGRVFLCCVSKGGHR*WVSGEC
Trigger: ACACTCCCCACTCACCCAGCAGCGGTGCCCACCTTT...GGACACGCAACAAAGGAAGACTCTACCGTGGAGAATCCACAAGTGCAAACAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR-3UTR CCA 90 bp AGCTGCTGGAGAGTCCAAGATAGTGCAGGCTTCACTTCTCGTGAATCAGGAAAGTCCATGGAGCAAGCATaGCAGAGCAGGCCTCCACAG +
Preference number: 2 (lower is better)
Translates to: SCWRVQDSAGFTSRESGKSMEQA*QSRPPQ
Trigger: CTGTGGAGGCCTGCTCTGCCATGCTTGCTCCATGGA...CTTTCCTGATTCACGAGAAGTGAAGCCTGCACTATCTTGGACTCTCCAGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
3UTR-3UTR GCA 90 bp AGTCATGGATTTGCTGAGCCCAGAGGGACTTTAGAGAGGATGGGGCCCAACTCTCTCTGCCCACAGAAGTaGTGGTGCCTTAGATCTTCA +
Preference number: 2 (lower is better)
Translates to: SHGFAEPRGTLERMGPNSLCPQK*WCLRSS
Trigger: TGAAGATCTAAGGCACCAGCACTTCTGTGGGCAGAG...AGAGTTGGGCCCCATCCTCTCTAAAGTCCCTCTGGGCTCAGCAAATCCATGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
3UTR-3UTR CCA 90 bp AGCTGCTGGAGAGTCCAAGATAGTGCAGGCTTCACTTCTCGTGAATCAGGAAAGAGGCCAGTCATGGGCTaGTCTTGGTCTTGGTCAGGT +
Preference number: 2 (lower is better)
Translates to: SCWRVQDSAGFTSRESGKRPVMG*SWSWSG
Trigger: ACCTGACCAAGACCAAGACCAGCCCATGACTGGCCT...CTTTCCTGATTCACGAGAAGTGAAGCCTGCACTATCTTGGACTCTCCAGCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
3UTR-3UTR TCA 90 bp AGCAGCGGTCTCTCTTCTTGTAATCCATGGAGCAAGCATGGCAGAGCAGGCCTCCTTCAGTGTCTAGAATaGGGACTGGACAAACAAGAG +
Preference number: 2 (lower is better)
Translates to: SSGLSSCNPWSKHGRAGLLQCLE*GLDKQE
Trigger: CTCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAG...GAGGCCTGCTCTGCCATGCTTGCTCCATGGATTACAAGAAGAGAGACCGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
3UTR-3UTR TCA 90 bp AGAGATGCTGGAGCCTCTGCCACAGGCGGTCCTTCTCTTGGATCAGTTCCAACACTTCAGTGTCTAGAATaGGGACTGGACAAACAAGAG +
Preference number: 2 (lower is better)
Translates to: RDAGASATGGPSLGSVPTLQCLE*GLDKQE
Trigger: CTCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAG...TGTTGGAACTGATCCAAGAGAAGGACCGCCTGTGGCAGAGGCTCCAGCATCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR-3UTR TCA 90 bp AGCTGCTGGAGAGTCCAAGATAGTGCAGGCTTCACTTCTCGTGAATCAGGAAAGTTAGAGAAGAAGCCCTaGGCACTGAGAGCTTCGCCA +
Preference number: 2 (lower is better)
Translates to: SCWRVQDSAGFTSRESGKLEKKP*ALRASP
Trigger: TGGCGAAGCTCTCAGTGCTCAGGGCTTCTTCTCTAA...CTTTCCTGATTCACGAGAAGTGAAGCCTGCACTATCTTGGACTCTCCAGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
3UTR-3UTR GCA 90 bp GGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTTTACCACAGAAGTGCTGGTaGCTTAGATCTTCAGTGTCT +
Preference number: 2 (lower is better)
Translates to: GCWGLIHSHGFAEPRGTLPQKCW*LRSSVS
Trigger: AGACACTGAAGATCTAAGGCACCAGCACTTCTGTGG...TAAAGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
3UTR-3UTR GCA 90 bp AAATGTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGACTCTGCCCACAGAAGTaGTGGTGCCTTAGATCTTCA +
Preference number: 2 (lower is better)
Translates to: KCQGCWGLIHSHGFAEPRLCPQK*WCLRSS
Trigger: TGAAGATCTAAGGCACCAGCACTTCTGTGGGCAGAG...TCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGACATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
3UTR-3UTR GCA 90 bp AAATGTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGAGAAATGTCAGGGCTaGTGGGGTCTTATCCACAGT +
Preference number: 2 (lower is better)
Translates to: KCQGCWGLIHSHGFAEPREKCQG*WGLIHS
Trigger: ACTGTGGATAAGACCCCAGCAGCCCTGACATTTCTC...TCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGACATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
3UTR-3UTR TCA 90 bp AGTCATGGATTTGCTGAGCCCAGAGGGACTTTAGAGAGGATGGGGCCCAACTCTCTTCAGTGTCTAGAATaGGGACTGGACAAACAAGAG +
Preference number: 2 (lower is better)
Translates to: SHGFAEPRGTLERMGPNSLQCLE*GLDKQE
Trigger: CTCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAG...AGAGTTGGGCCCCATCCTCTCTAAAGTCCCTCTGGGCTCAGCAAATCCATGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
3UTR-3UTR CCA 90 bp AAATGTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGATCTTCTTGTAATCCATaGAGCAAGCATGGCAGAGCA +
Preference number: 2 (lower is better)
Translates to: KCQGCWGLIHSHGFAEPRSSCNP*SKHGRA
Trigger: TGCTCTGCCATGCTTGCTCCATGGATTACAAGAAGA...TCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGACATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
3UTR-3UTR GCA 90 bp TGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAGGGCTGGGAAAAAAGAAAGGAAGATaGCTTTGTTGCTGGGACCTG +
Preference number: 2 (lower is better)
Translates to: CLRSSVSRMRTGQTRGLGKKKGR*LCCWDL
Trigger: CAGGTCCCAGCAACAAAGGCATCTTCCTTTCTTTTT...TCCCAGCCCTCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR GCA 72 bp CAGGCCACACAGCACTCGGGAGCCATGGAAGAGAGATaGTGGAGCCTCTGCCACAGGCGGTCCTTCTCTTGG +
Preference number: 3 (lower is better)
Translates to: QATQHSGAMEER*WSLCHRRSFSW
Trigger: CCAAGAGAAGGACCGCCTGTGGCAGAGGCTCCAGCATCTCTCTTCCATGGCTCCCGAGTGCTGTGTGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR CCA 72 bp GCTGGGACCTGGGAAGCCCTGCCAGCTGCTGTCCACTaGGTGCATCTTGCAGACAGATGGCTTGACTGGTGT +
Preference number: 3 (lower is better)
Translates to: AGTWEALPAAVH*VHLADRWLDWC
Trigger: ACACCAGTCAAGCCATCTGTCTGCAAGATGCACCCAGTGGACAGCAGCTGGCAGGGCTTCCCAGGTCCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR CCA 72 bp TCTTGGATCAGTTCCAACACCCGCCTCTTCATGGCCTaGACCAAGTCCCGCTGCCCTCCAAGCTCCTCCTGG +
Preference number: 3 (lower is better)
Translates to: SWISSNTRLFMA*TKSRCPPSSSW
Trigger: CCAGGAGGAGCTTGGAGGGCAGCGGGACTTGGTCCAGGCCATGAAGAGGCGGGTGTTGGAACTGATCCAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR GCA 72 bp GAGCTTCGCCAAAGTCACCTGGCTCGTTGTGGTAGTTaGAGGGCTGGAACCACTCCCCACACCCTACTCTGC +
Preference number: 3 (lower is better)
Translates to: ELRQSHLARCGS*RAGTTPHTLLC
Trigger: GCAGAGTAGGGTGTGGGGAGTGGTTCCAGCCCTGCAACTACCACAACGAGCCAGGTGACTTTGGCGAAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
3UTR CCA 72 bp TCAGGTGACCTGGGCTTCTCTTCCCTGGGCGCAGGGTaGGCAGCAGCGGTCTCTCTTCTTGTAATCCATGGA +
Preference number: 3 (lower is better)
Translates to: SGDLGFSSLGAG*AAAVSLLVIHG
Trigger: TCCATGGATTACAAGAAGAGAGACCGCTGCTGCCCACCCTGCGCCCAGGGAAGAGAAGCCCAGGTCACCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
3UTR CCA 72 bp AGATCTTGCTACAGGCCACACAGCACTCGGGAGCCATaGAAGAGAGATGCTGGAGCCTCTGCCACAGGCGGT +
Preference number: 3 (lower is better)
Translates to: RSCYRPHSTREP*KRDAGASATGG
Trigger: ACCGCCTGTGGCAGAGGCTCCAGCATCTCTCTTCCATGGCTCCCGAGTGCTGTGTGGCCTGTAGCAAGATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR-3UTR CAA 90 bp GTTCCAACACCCGCCTCTTCATGGCCTGGACCAAGTCCCGCTGCCCTCCAAGCTTGTGAGTCCCCTCTGTaGTTCTCTGACCCTCTGCAA +
Preference number: 3 (lower is better)
Translates to: VPTPASSWPGPSPAALQACESPL*FSDPLQ
Trigger: TTGCAGAGGGTCAGAGAACAACAGAGGGGACTCACA...AGCTTGGAGGGCAGCGGGACTTGGTCCAGGCCATGAAGAGGCGGGTGTTGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR GCA 72 bp AGTTGCAGGGCTGGAACCACTCCCCACACCCTACTCTaGCCACAGAAGTGCTGGTGCCTTAGATCTTCAGTG +
Preference number: 3 (lower is better)
Translates to: SCRAGTTPHTLL*PQKCWCLRSSV
Trigger: CACTGAAGATCTAAGGCACCAGCACTTCTGTGGGCAGAGTAGGGTGTGGGGAGTGGTTCCAGCCCTGCAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
3UTR GCA 72 bp CACTTGTGGATTCTCCACGGTAGAGTCTTCCTTTGTTaGGTGTCCCTGAAGGACCCAGGGCTCCCCCAGGAT +
Preference number: 3 (lower is better)
Translates to: HLWILHGRVFLC*VSLKDPGLPQD
Trigger: ATCCTGGGGGAGCCCTGGGTCCTTCAGGGACACGCAACAAAGGAAGACTCTACCGTGGAGAATCCACAAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR GCA 72 bp TGCATGGATACCGCCGAGAAAATCGGCCAAAGATCTTaGTACAGGCCACACAGCACTCGGGAGCCATGGAAG +
Preference number: 3 (lower is better)
Translates to: CMDTAEKIGQRS*YRPHSTREPWK
Trigger: CTTCCATGGCTCCCGAGTGCTGTGTGGCCTGTAGCAAGATCTTTGGCCGATTTTCTCGGCGGTATCCATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR-3UTR CAA 90 bp CACAGTCATGGATTTGCTGAGCCCAGAGGGACTTTAGAGAGGATGGGGCCCAACTCCACTGGGTGCATCTaGCAGACAGATGGCTTGACT +
Preference number: 3 (lower is better)
Translates to: HSHGFAEPRGTLERMGPNSTGCI*QTDGLT
Trigger: AGTCAAGCCATCTGTCTGCAAGATGCACCCAGTGGA...GTTGGGCCCCATCCTCTCTAAAGTCCCTCTGGGCTCAGCAAATCCATGACTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR GCA 72 bp ACTCCCCACACCCTACTCTGCCCACAGAAGTGCTGGTaGCTTAGATCTTCAGTGTCTAGAATGAGGACTGGA +
Preference number: 3 (lower is better)
Translates to: TPHTLLCPQKCW*LRSSVSRMRTG
Trigger: TCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCACCAGCACTTCTGTGGGCAGAGTAGGGTGTGGGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
3UTR GCA 72 bp CCCTTCTTTTCCAAAAAGAAAGGAAGATGCCTTTGTTaGTGGGACCTGGGAAGCCCTGCCAGCTGCTGTCCA +
Preference number: 3 (lower is better)
Translates to: PFFSKKKGRCLC*WDLGSPASCCP
Trigger: TGGACAGCAGCTGGCAGGGCTTCCCAGGTCCCAGCAACAAAGGCATCTTCCTTTCTTTTTGGAAAAGAAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR GCA 72 bp TGCTCCTCCCTTCTGGCCACAAGGGTCACTTCTGTTTaGACTTGTGGATTCTCCACGGTAGAGTCTTCCTTT +
Preference number: 3 (lower is better)
Translates to: CSSLLATRVTSV*TCGFSTVESSF
Trigger: AAAGGAAGACTCTACCGTGGAGAATCCACAAGTGCAAACAGAAGTGACCCTTGTGGCCAGAAGGGAGGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR CCA 72 bp CCTTCTGGCCACAAGGGTCACTTCTGTTTGCACTTGTaGATTCTCCACGGTAGAGTCTTCCTTTGTTGCGTG +
Preference number: 3 (lower is better)
Translates to: PSGHKGHFCLHL*ILHGRVFLCCV
Trigger: CACGCAACAAAGGAAGACTCTACCGTGGAGAATCCACAAGTGCAAACAGAAGTGACCCTTGTGGCCAGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR CCA 90 bp CCGCCTCTTCATGGCCTGGACCAAGTCCCGCTGCCCTCCAAGCTCCTCCTGGTACCTCTACAGCCCCTCTaGGGCTGGGCATCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: PPLHGLDQVPLPSKLLLVPLQPL*GWASAA
Trigger: GGCTGCTGATGCCCAGCCCCAGAGGGGCTGTAGAGG...TACCAGGAGGAGCTTGGAGGGCAGCGGGACTTGGTCCAGGCCATGAAGAGGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR GCA 90 bp CTTCTCGTGAATCAGGAAAGGTGGGCACCGCTGCTGGGTGAGTGGGGAGTGTGGTGCTCCCTCAGCAGCTaGTCCTGGCGCTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LLVNQERWAPLLGEWGVWCSLSS*SWRWAC
Trigger: GCAGGCCCAGCGCCAGGAGCAGCTGCTGAGGGAGCA...CCACACTCCCCACTCACCCAGCAGCGGTGCCCACCTTTCCTGATTCACGAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp CCGCCTCTTCATGGCCTGGACCAAGTCCCGCTGCCCTCCAAGCTCCTCCTGGTATTCTCCAGGCTGGGCTaGTGCAGGGGCTTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: PPLHGLDQVPLPSKLLLVFSRLG*CRGFLS
Trigger: GCTCAGGAAGCCCCTGCAGCAGCCCAGCCTGGAGAA...TACCAGGAGGAGCTTGGAGGGCAGCGGGACTTGGTCCAGGCCATGAAGAGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR CCA 90 bp CAGGCAGGTGGGAGGCCAGTCATGGGCTGGTCTTGGTCTTGGTCAGGTGACCTGTCCCTGGGCGCAGGGTaGGCAGCAGCGGTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: QAGGRPVMGWSWSWSGDLSLGAG*AAAVSL
Trigger: AAGAGAGACCGCTGCTGCCCACCCTGCGCCCAGGGA...CAGGTCACCTGACCAAGACCAAGACCAGCCCATGACTGGCCTCCCACCTGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp GTTCCAACACCCGCCTCTTCATGGCCTGGACCAAGTCCCGCTGCCCTCCAAGCTCCTGGAGGGGGAACCTaGCTCACAGCGGTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: VPTPASSWPGPSPAALQAPGGGT*LTAVGE
Trigger: TTCCCCCACCGCTGTGAGCCAGGTTCCCCCTCCAGG...AGCTTGGAGGGCAGCGGGACTTGGTCCAGGCCATGAAGAGGCGGGTGTTGGAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR TCA 90 bp CAGGTGGGAGGCCAGTCATGGGCTGGTCTTGGTCTTGGTCAGGTGACCTGGGCTTTTGTTGCGTGTCCCTaGAGGACCCAGGGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: QVGGQSWAGLGLGQVTWAFVACP*RTQGSP
Trigger: GGGGGAGCCCTGGGTCCTTCAGGGACACGCAACAAA...AGCCCAGGTCACCTGACCAAGACCAAGACCAGCCCATGACTGGCCTCCCACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp CTTCTCGTGAATCAGGAAAGGTGGGCACCGCTGCTGGGTGAGTGGGGAGTGTGGTCCCTGGGCGCAGGGTaGGCAGCAGCGGTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: LLVNQERWAPLLGEWGVWSLGAG*AAAVSL
Trigger: AAGAGAGACCGCTGCTGCCCACCCTGCGCCCAGGGA...CCACACTCCCCACTCACCCAGCAGCGGTGCCCACCTTTCCTGATTCACGAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp CCGCCTCTTCATGGCCTGGACCAAGTCCCGCTGCCCTCCAAGCTCCTCCTGGTACTTGGTCAGGTGACCTaGGCTTCTCTTCCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: PPLHGLDQVPLPSKLLLVLGQVT*ASLPWA
Trigger: CGCCCAGGGAAGAGAAGCCCAGGTCACCTGACCAAG...TACCAGGAGGAGCTTGGAGGGCAGCGGGACTTGGTCCAGGCCATGAAGAGGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR GCA 90 bp CAGGCAGGTGGGAGGCCAGTCATGGGCTGGTCTTGGTCTTGGTCAGGTGACCTGTTCAGGAGGCAAAGCTaGAGGGCCTCAGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: QAGGRPVMGWSWSWSGDLFRRQS*RASASC
Trigger: GCAGCTGGCTGAGGCCCTGCAGCTTTGCCTCCTGAA...CAGGTCACCTGACCAAGACCAAGACCAGCCCATGACTGGCCTCCCACCTGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374155.7
CDS-3UTR GCA 90 bp GGGTGGGCAGCAGCGGTCTCTCTTCTTGTAATCCATGGAGCAAGCATGGCAGAGTCCTGGCGCTGGGCCTaGTCCTCAGCCTTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: GWAAAVSLLVIHGASMAESWRWA*SSAFRS
Trigger: GCTCCGGAAGGCTGAGGAGCAGGCCCAGCGCCAGGA...CTCTGCCATGCTTGCTCCATGGATTACAAGAAGAGAGACCGCTGCTGCCCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp AGCCATGGAAGAGAGATGCTGGAGCCTCTGCCACAGGCGGTCCTTCTCTTGGATTGCTCCCTCAGCAGCTaGTCCTGGCGCTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SHGREMLEPLPQAVLLLDCSLSS*SWRWAC
Trigger: GCAGGCCCAGCGCCAGGAGCAGCTGCTGAGGGAGCA...ATCCAAGAGAAGGACCGCCTGTGGCAGAGGCTCCAGCATCTCTCTTCCATGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR CCA 90 bp CTTCTCGTGAATCAGGAAAGGTGGGCACCGCTGCTGGGTGAGTGGGGAGTGTGGCGCCTCTTCATGGCCTaGACCAAGTCCCGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: LLVNQERWAPLLGEWGVWRLFMA*TKSRCP
Trigger: AGGGCAGCGGGACTTGGTCCAGGCCATGAAGAGGCG...CCACACTCCCCACTCACCCAGCAGCGGTGCCCACCTTTCCTGATTCACGAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp TGTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGCCTGGCTCACAGCGGTaGGGGAACCGCAGACGCTGC +
Preference number: 4 (lower is better)
Translates to: CQGCWGLIHSHGFAEPRGPGSQR*GNRRRC
Trigger: GCAGCGTCTGCGGTTCCCCCACCGCTGTGAGCCAGG...CCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR GCA 90 bp CTTCTCGTGAATCAGGAAAGGTGGGCACCGCTGCTGGGTGAGTGGGGAGTGTGGCAGCCACAGAGTCTGTaGAGCTCGGCACTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: LLVNQERWAPLLGEWGVWQPQSL*SSALVS
Trigger: GGACACCAGTGCCGAGCTGCACAGACTCTGTGGCTG...CCACACTCCCCACTCACCCAGCAGCGGTGCCCACCTTTCCTGATTCACGAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp CTGCCCTCCAAGCTCCTCCTGGTACATGGCATCCCTCCTCTCAGCCTCCTGTTGCAGCCACAGAGTCTGTaGAGCTCGGCACTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: LPSKLLLVHGIPPLSLLLQPQSL*SSALVS
Trigger: GGACACCAGTGCCGAGCTGCACAGACTCTGTGGCTG...CAACAGGAGGCTGAGAGGAGGGATGCCATGTACCAGGAGGAGCTTGGAGGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR GCA 90 bp TCCTCAGCCTTCCGGAGCCCAAGTCTGAGGCTCTTGATCTCGTCCTGCAGGGACTCCATGTTTCCCCGCTaGCGTCGTAGGGCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: SSAFRSPSLRLLISSCRDSMFPR*RRRAVQ
Trigger: CTGCACTGCCCTACGACGGCAGCGGGGAAACATGGA...GTCCCTGCAGGACGAGATCAAGAGCCTCAGACTTGGGCTCCGGAAGGCTGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR GCA 90 bp CTTCTCGTGAATCAGGAAAGGTGGGCACCGCTGCTGGGTGAGTGGGGAGTGTGGGGAAGCCCTGCCAGCTaGTGTCCACTGGGTGCATCT +
Preference number: 4 (lower is better)
Translates to: LLVNQERWAPLLGEWGVWGSPAS*CPLGAS
Trigger: AGATGCACCCAGTGGACAGCAGCTGGCAGGGCTTCC...CCACACTCCCCACTCACCCAGCAGCGGTGCCCACCTTTCCTGATTCACGAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp GTTCCAACACCCGCCTCTTCATGGCCTGGACCAAGTCCCGCTGCCCTCCAAGCTCTCTTGATCTCGTCCTaGAGGGACACCTCGGCTTGC +
Preference number: 4 (lower is better)
Translates to: VPTPASSWPGPSPAALQALLISS*RDTSAC
Trigger: GCAAGCCGAGGTGTCCCTGCAGGACGAGATCAAGAG...AGCTTGGAGGGCAGCGGGACTTGGTCCAGGCCATGAAGAGGCGGGTGTTGGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR GCA 90 bp CAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTTGCTCCCGAAGTGCCTaGAGCTCCCCCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: QGCWGLIHSHGFAEPRGTCSRSA*SSPSCS
Trigger: GGAGCAGGAGGGGGAGCTGCAGGCACTTCGGGAGCA...AGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp GCTGCCCTCCAAGCTCCTCCTGGTACATGGCATCCCTCCTCTCAGCCTCCTGTTGTCTTCTTGGCGTTCTaGGCAGAGCAGAGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: AALQAPPGTWHPSSQPPVVFLAF*AEQRAP
Trigger: CGGAGCCCTCTGCTCTGCCCAGAACGCCAAGAAGAC...AACAGGAGGCTGAGAGGAGGGATGCCATGTACCAGGAGGAGCTTGGAGGGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR CCA 90 bp CAGGCAGGTGGGAGGCCAGTCATGGGCTGGTCTTGGTCTTGGTCAGGTGACCTGCTGGGTCTCCTTCCCTaGGTTTGGGTGGAACTGGAG +
Preference number: 4 (lower is better)
Translates to: QAGGRPVMGWSWSWSGDLLGLLP*VWVELE
Trigger: CTCCAGTTCCACCCAAACCCAGGGAAGGAGACCCAG...CAGGTCACCTGACCAAGACCAAGACCAGCCCATGACTGGCCTCCCACCTGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp TGTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGCCTCTACAGCCCCTCTaGGGCTGGGCATCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: CQGCWGLIHSHGFAEPRGPLQPL*GWASAA
Trigger: GGCTGCTGATGCCCAGCCCCAGAGGGGCTGTAGAGG...CCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp CAGGCAGGTGGGAGGCCAGTCATGGGCTGGTCTTGGTCTTGGTCAGGTGACCTGCCTCCAAGCTCCTCCTaGTACATGGCATCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: QAGGRPVMGWSWSWSGDLPPSSS*YMASLL
Trigger: GAGGAGGGATGCCATGTACCAGGAGGAGCTTGGAGG...CAGGTCACCTGACCAAGACCAAGACCAGCCCATGACTGGCCTCCCACCTGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp CAGGTGGGAGGCCAGTCATGGGCTGGTCTTGGTCTTGGTCAGGTGACCTGGGCTAGCACTCGGGAGCCATaGAAGAGAGATGCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: QVGGQSWAGLGLGQVTWASTREP*KRDAGA
Trigger: GGCTCCAGCATCTCTCTTCCATGGCTCCCGAGTGCT...AGCCCAGGTCACCTGACCAAGACCAAGACCAGCCCATGACTGGCCTCCCACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp CAGGTGGGAGGCCAGTCATGGGCTGGTCTTGGTCTTGGTCAGGTGACCTGGGCTTCCATGGAGCAAGCATaGCAGAGCAGGCCTCCACAG +
Preference number: 4 (lower is better)
Translates to: QVGGQSWAGLGLGQVTWASMEQA*QSRPPQ
Trigger: CTGTGGAGGCCTGCTCTGCCATGCTTGCTCCATGGA...AGCCCAGGTCACCTGACCAAGACCAAGACCAGCCCATGACTGGCCTCCCACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp TGTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGTGGGCTTCTCTTCCCTaGGCGCAGGGTGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: CQGCWGLIHSHGFAEPRGWASLP*AQGGQQ
Trigger: CTGCTGCCCACCCTGCGCCCAGGGAAGAGAAGCCCA...CCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp GGGTGGGCAGCAGCGGTCTCTCTTCTTGTAATCCATGGAGCAAGCATGGCAGAGTGGGCTTCTCTTCCCTaGGCGCAGGGTGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GWAAAVSLLVIHGASMAEWASLP*AQGGQQ
Trigger: CTGCTGCCCACCCTGCGCCCAGGGAAGAGAAGCCCA...CTCTGCCATGCTTGCTCCATGGATTACAAGAAGAGAGACCGCTGCTGCCCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp CAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTGGTGGGCACCGCTGCTaGGTGAGTGGGGAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: QGCWGLIHSHGFAEPRGTGGHRC*VSGECG
Trigger: TCCACACTCCCCACTCACCCAGCAGCGGTGCCCACC...AGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp GGGTGGGCAGCAGCGGTCTCTCTTCTTGTAATCCATGGAGCAAGCATGGCAGAGGGTGGGCACCGCTGCTaGGTGAGTGGGGAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: GWAAAVSLLVIHGASMAEGGHRC*VSGECG
Trigger: TCCACACTCCCCACTCACCCAGCAGCGGTGCCCACC...CTCTGCCATGCTTGCTCCATGGATTACAAGAAGAGAGACCGCTGCTGCCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp CAGGTGGGAGGCCAGTCATGGGCTGGTCTTGGTCTTGGTCAGGTGACCTGGGCTGTGAATCAGGAAAGGTaGGCACCGCTGCTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: QVGGQSWAGLGLGQVTWAVNQER*APLLGE
Trigger: CTCACCCAGCAGCGGTGCCCACCTTTCCTGATTCAC...AGCCCAGGTCACCTGACCAAGACCAAGACCAGCCCATGACTGGCCTCCCACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR TCA 90 bp CAGGCAGGTGGGAGGCCAGTCATGGGCTGGTCTTGGTCTTGGTCAGGTGACCTGCGAAGGCCACCCCATTaGGAGCATAGAGAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: QAGGRPVMGWSWSWSGDLRRPPH*EHRESP
Trigger: TGGACTCTCTCTATGCTCTCAATGGGGTGGCCTTCG...CAGGTCACCTGACCAAGACCAAGACCAGCCCATGACTGGCCTCCCACCTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR TCA 90 bp GCTGCCCTCCAAGCTCCTCCTGGTACATGGCATCCCTCCTCTCAGCCTCCTGTTCTGGGTGCTGGGTGTTaGGTTCCCCAGGAAGATCTC +
Preference number: 4 (lower is better)
Translates to: AALQAPPGTWHPSSQPPVLGAGC*VPQEDL
Trigger: GAGATCTTCCTGGGGAACTCAACACCCAGCACCCAG...AACAGGAGGCTGAGAGGAGGGATGCCATGTACCAGGAGGAGCTTGGAGGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR GCA 90 bp GCTGCCCTCCAAGCTCCTCCTGGTACATGGCATCCCTCCTCTCAGCCTCCTGTTCCATCCAGGTCTGGCTaGTGGAGGTCCAACTCGAAG +
Preference number: 4 (lower is better)
Translates to: AALQAPPGTWHPSSQPPVPSRSG*WRSNSK
Trigger: CTTCGAGTTGGACCTCCAGCAGCCAGACCTGGATGG...AACAGGAGGCTGAGAGGAGGGATGCCATGTACCAGGAGGAGCTTGGAGGGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR GCA 90 bp CCGCCTCTTCATGGCCTGGACCAAGTCCCGCTGCCCTCCAAGCTCCTCCTGGTACTTCTGGCTCCCACATaGTCTGGGGGTACCTATGTT +
Preference number: 4 (lower is better)
Translates to: PPLHGLDQVPLPSKLLLVLLAPT*SGGTYV
Trigger: AACATAGGTACCCCCAGAGCATGTGGGAGCCAGAAG...TACCAGGAGGAGCTTGGAGGGCAGCGGGACTTGGTCCAGGCCATGAAGAGGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR GCA 90 bp CTTCTCGTGAATCAGGAAAGGTGGGCACCGCTGCTGGGTGAGTGGGGAGTGTGGCTCTTGATCTCGTCCTaGAGGGACACCTCGGCTTGC +
Preference number: 4 (lower is better)
Translates to: LLVNQERWAPLLGEWGVWLLISS*RDTSAC
Trigger: GCAAGCCGAGGTGTCCCTGCAGGACGAGATCAAGAG...CCACACTCCCCACTCACCCAGCAGCGGTGCCCACCTTTCCTGATTCACGAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp AGTCATGGATTTGCTGAGCCCAGAGGGACTTTAGAGAGGATGGGGCCCAACTCTTCCTGGCGCTGGGCCTaGTCCTCAGCCTTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: SHGFAEPRGTLERMGPNSSWRWA*SSAFRS
Trigger: GCTCCGGAAGGCTGAGGAGCAGGCCCAGCGCCAGGA...AGAGTTGGGCCCCATCCTCTCTAAAGTCCCTCTGGGCTCAGCAAATCCATGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp GGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTTTATGCTCCCTCAGCAGCTaGTCCTGGCGCTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GCWGLIHSHGFAEPRGTLCSLSS*SWRWAC
Trigger: GCAGGCCCAGCGCCAGGAGCAGCTGCTGAGGGAGCA...TAAAGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp GGGTGGGCAGCAGCGGTCTCTCTTCTTGTAATCCATGGAGCAAGCATGGCAGAGTGTGCAGCTCGGCACTaGTGTCCGTCACTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: GWAAAVSLLVIHGASMAECAARH*CPSLAP
Trigger: AGGGGCCAGTGACGGACACCAGTGCCGAGCTGCACA...CTCTGCCATGCTTGCTCCATGGATTACAAGAAGAGAGACCGCTGCTGCCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp ATGCTGGAGCCTCTGCCACAGGCGGTCCTTCTCTTGGATCAGTTCCAACACCCGTCCAGGTCTGGCTGCTaGAGGTCCAACTCGAAGGCC +
Preference number: 4 (lower is better)
Translates to: MLEPLPQAVLLLDQFQHPSRSGC*RSNSKA
Trigger: GGCCTTCGAGTTGGACCTCCAGCAGCCAGACCTGGA...CGGGTGTTGGAACTGATCCAAGAGAAGGACCGCCTGTGGCAGAGGCTCCAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR CCA 90 bp CAGGTGGGAGGCCAGTCATGGGCTGGTCTTGGTCTTGGTCAGGTGACCTGGGCTCCCTCCATATGCGGCTaGGATCTTCTTTGGGGCATC +
Preference number: 4 (lower is better)
Translates to: QVGGQSWAGLGLGQVTWAPSICG*DLLWGI
Trigger: GATGCCCCAAAGAAGATCCCAGCCGCATATGGAGGG...AGCCCAGGTCACCTGACCAAGACCAAGACCAGCCCATGACTGGCCTCCCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR CCA 90 bp CTTCTCGTGAATCAGGAAAGGTGGGCACCGCTGCTGGGTGAGTGGGGAGTGTGGTTTGTTGCTGGGACCTaGGAAGCCCTGCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LLVNQERWAPLLGEWGVWFVAGT*EALPAA
Trigger: AGCAGCTGGCAGGGCTTCCCAGGTCCCAGCAACAAA...CCACACTCCCCACTCACCCAGCAGCGGTGCCCACCTTTCCTGATTCACGAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp GTTCCAACACCCGCCTCTTCATGGCCTGGACCAAGTCCCGCTGCCCTCCAAGCTGGCTCCCACATGCTCTaGGGGTACCTATGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: VPTPASSWPGPSPAALQAGSHML*GYLCFL
Trigger: CAGGAAACATAGGTACCCCCAGAGCATGTGGGAGCC...AGCTTGGAGGGCAGCGGGACTTGGTCCAGGCCATGAAGAGGCGGGTGTTGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR CCA 90 bp CACAGTCATGGATTTGCTGAGCCCAGAGGGACTTTAGAGAGGATGGGGCCCAACCCTCTACAGCCCCTCTaGGGCTGGGCATCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: HSHGFAEPRGTLERMGPNPLQPL*GWASAA
Trigger: GGCTGCTGATGCCCAGCCCCAGAGGGGCTGTAGAGG...GTTGGGCCCCATCCTCTCTAAAGTCCCTCTGGGCTCAGCAAATCCATGACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp CAGGCAGGTGGGAGGCCAGTCATGGGCTGGTCTTGGTCTTGGTCAGGTGACCTGCTTGCTCCTCCCTTCTaGCCACAAGGGTCACTTCTG +
Preference number: 4 (lower is better)
Translates to: QAGGRPVMGWSWSWSGDLLAPPF*PQGSLL
Trigger: CAGAAGTGACCCTTGTGGCCAGAAGGGAGGAGCAAG...CAGGTCACCTGACCAAGACCAAGACCAGCCCATGACTGGCCTCCCACCTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp CTGGGTGTTGAGTTCCCCAGGAAGATCTCAATCCATGGGGCTCTTTCCTCCTGGTCCCTGGGCGCAGGGTaGGCAGCAGCGGTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: LGVEFPRKISIHGALSSWSLGAG*AAAVSL
Trigger: AAGAGAGACCGCTGCTGCCCACCCTGCGCCCAGGGA...CCAGGAGGAAAGAGCCCCATGGATTGAGATCTTCCTGGGGAACTCAACACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR CCA 90 bp CAGGTGGGAGGCCAGTCATGGGCTGGTCTTGGTCTTGGTCAGGTGACCTGGGCTCCCTCCATATGCGGCTaGGATCTTGAGGATGCCAAG +
Preference number: 4 (lower is better)
Translates to: QVGGQSWAGLGLGQVTWAPSICG*DLEDAK
Trigger: CTTGGCATCCTCAAGATCCCAGCCGCATATGGAGGG...AGCCCAGGTCACCTGACCAAGACCAAGACCAGCCCATGACTGGCCTCCCACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374155.7
CDS-3UTR CCA 90 bp AGTCATGGATTTGCTGAGCCCAGAGGGACTTTAGAGAGGATGGGGCCCAACTCTGGCGGCCTCTGCAGCTaGCACTTCCCCAAGTGGGCG +
Preference number: 4 (lower is better)
Translates to: SHGFAEPRGTLERMGPNSGGLCS*HFPKWA
Trigger: CGCCCACTTGGGGAAGTGCCAGCTGCAGAGGCCGCC...AGAGTTGGGCCCCATCCTCTCTAAAGTCCCTCTGGGCTCAGCAAATCCATGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374155.7
CDS-3UTR CCA 90 bp CCCTTCTGGCTCCCACATGCTCTGGGGGTACCTATGTTTCCTGGAACTTTCCCCGTTTCCCAGGTGGGCTaGGGCTTCCCTTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PFWLPHALGVPMFPGTFPVSQVG*GFPSWL
Trigger: CAGCCAGGAAGGGAAGCCCCAGCCCACCTGGGAAAC...GGGGAAAGTTCCAGGAAACATAGGTACCCCCAGAGCATGTGGGAGCCAGAAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR TCA 90 bp CTTCTCGTGAATCAGGAAAGGTGGGCACCGCTGCTGGGTGAGTGGGGAGTGTGGCCCTCTGTTGTTCTCTaGCCCTCTGCAACCAGCAGA +
Preference number: 4 (lower is better)
Translates to: LLVNQERWAPLLGEWGVWPSVVL*PSATSR
Trigger: TCTGCTGGTTGCAGAGGGTCAGAGAACAACAGAGGG...CCACACTCCCCACTCACCCAGCAGCGGTGCCCACCTTTCCTGATTCACGAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR TCA 90 bp CCAGCTGCTGTCCACTGGGTGCATCTTGCAGACAGATGGCTTGACTGGTGTGTGCTTCCTGACACCTGCTaGGCTGCTCCCGAAGTGCCT +
Preference number: 4 (lower is better)
Translates to: PAAVHWVHLADRWLDWCVLPDTC*AAPEVP
Trigger: AGGCACTTCGGGAGCAGCTCAGCAGGTGTCAGGAAG...CACACACCAGTCAAGCCATCTGTCTGCAAGATGCACCCAGTGGACAGCAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR TCA 90 bp TGTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGTCGGCTCTCTCTTCCTaGCACCTGCTGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: CQGCWGLIHSHGFAEPRGSALSS*HLLSCS
Trigger: GGAGCAGCTCAGCAGGTGTCAGGAAGAGAGAGCCGA...CCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR TCA 90 bp GTTCCAACACCCGCCTCTTCATGGCCTGGACCAAGTCCCGCTGCCCTCCAAGCTTTAGAGAAGAAGCCCTaGGCACTGAGAGCTTCGCCA +
Preference number: 4 (lower is better)
Translates to: VPTPASSWPGPSPAALQALEKKP*ALRASP
Trigger: TGGCGAAGCTCTCAGTGCTCAGGGCTTCTTCTCTAA...AGCTTGGAGGGCAGCGGGACTTGGTCCAGGCCATGAAGAGGCGGGTGTTGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR TCA 90 bp AGCTGGCACTTCCCCAAGTGGGCGCTGAGGTCATGGAGTTCCAGCATCTTCAGGATGCGGCTGGGATCTTaGGGATGCCAAGGAGATGGG +
Preference number: 4 (lower is better)
Translates to: SWHFPKWALRSWSSSIFRMRLGS*GCQGDG
Trigger: CCCATCTCCTTGGCATCCTCAAGATCCCAGCCGCAT...CCTGAAGATGCTGGAACTCCATGACCTCAGCGCCCACTTGGGGAAGTGCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374155.7
CDS-3UTR GCA 90 bp GTTCCAACACCCGCCTCTTCATGGCCTGGACCAAGTCCCGCTGCCCTCCAAGCTGCCGTCGTAGGGCAGTaGAGAGAAAGTCCCAGTAAT +
Preference number: 4 (lower is better)
Translates to: VPTPASSWPGPSPAALQAAVVGQ*RESPSN
Trigger: ATTACTGGGACTTTCTCTGCACTGCCCTACGACGGC...AGCTTGGAGGGCAGCGGGACTTGGTCCAGGCCATGAAGAGGCGGGTGTTGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR GCA 90 bp CAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTTCCATGTTTCCCCGCTaGCGTCGTAGGGCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: QGCWGLIHSHGFAEPRGTSMFPR*RRRAVQ
Trigger: CTGCACTGCCCTACGACGGCAGCGGGGAAACATGGA...AGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp GTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGAGGAAGCCCTGCCAGCTaGTGTCCACTGGGTGCATCT +
Preference number: 4 (lower is better)
Translates to: VRAAGVLSTVMDLLSPEGGSPAS*CPLGAS
Trigger: AGATGCACCCAGTGGACAGCAGCTGGCAGGGCTTCC...TCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp CAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTGGAAGCCCTGCCAGCTaGTGTCCACTGGGTGCATCT +
Preference number: 4 (lower is better)
Translates to: QGCWGLIHSHGFAEPRGTGSPAS*CPLGAS
Trigger: AGATGCACCCAGTGGACAGCAGCTGGCAGGGCTTCC...AGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp CTTCTCGTGAATCAGGAAAGGTGGGCACCGCTGCTGGGTGAGTGGGGAGTGTGGGGAAGATGCCTTTGTTaGTGGGACCTGGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: LLVNQERWAPLLGEWGVWGRCLC*WDLGSP
Trigger: AGGGCTTCCCAGGTCCCAGCAACAAAGGCATCTTCC...CCACACTCCCCACTCACCCAGCAGCGGTGCCCACCTTTCCTGATTCACGAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp CAGGCAGGTGGGAGGCCAGTCATGGGCTGGTCTTGGTCTTGGTCAGGTGACCTGCTTCTGGCTCCCACATaGTCTGGGGGTACCTATGTT +
Preference number: 4 (lower is better)
Translates to: QAGGRPVMGWSWSWSGDLLLAPT*SGGTYV
Trigger: AACATAGGTACCCCCAGAGCATGTGGGAGCCAGAAG...CAGGTCACCTGACCAAGACCAAGACCAGCCCATGACTGGCCTCCCACCTGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp GGGTGGGCAGCAGCGGTCTCTCTTCTTGTAATCCATGGAGCAAGCATGGCAGAGTCCCCTGTCCCTGGGTaGTGGGTGTTGAGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: GWAAAVSLLVIHGASMAESPVPG*WVLSSP
Trigger: TGGGGAACTCAACACCCAGCACCCAGGGACAGGGGA...CTCTGCCATGCTTGCTCCATGGATTACAAGAAGAGAGACCGCTGCTGCCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp AGTCATGGATTTGCTGAGCCCAGAGGGACTTTAGAGAGGATGGGGCCCAACTCTTGCTCCCGAAGTGCCTaGAGCTCCCCCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SHGFAEPRGTLERMGPNSCSRSA*SSPSCS
Trigger: GGAGCAGGAGGGGGAGCTGCAGGCACTTCGGGAGCA...AGAGTTGGGCCCCATCCTCTCTAAAGTCCCTCTGGGCTCAGCAAATCCATGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp AGCAGCGGTCTCTCTTCTTGTAATCCATGGAGCAAGCATGGCAGAGCAGGCCTCTGGACCAAGTCCCGCTaGCCTCCAAGCTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SSGLSSCNPWSKHGRAGLWTKSR*PPSSSW
Trigger: CCAGGAGGAGCTTGGAGGGCAGCGGGACTTGGTCCA...GAGGCCTGCTCTGCCATGCTTGCTCCATGGATTACAAGAAGAGAGACCGCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp GTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGAACTGGTGTCCGTCACTaGCCCCTGCCCATCCCCATA +
Preference number: 4 (lower is better)
Translates to: VRAAGVLSTVMDLLSPEGTGVRH*PLPIPI
Trigger: TATGGGGATGGGCAGGGGCCAGTGACGGACACCAGT...TCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp CTGCCCTCCAAGCTCCTCCTGGTACATGGCATCCCTCCTCTCAGCCTCCTGTTGCCAGCTGCTGTCCACTaGGTGCATCTTGCAGACAGA +
Preference number: 4 (lower is better)
Translates to: LPSKLLLVHGIPPLSLLLPAAVH*VHLADR
Trigger: TCTGTCTGCAAGATGCACCCAGTGGACAGCAGCTGG...CAACAGGAGGCTGAGAGGAGGGATGCCATGTACCAGGAGGAGCTTGGAGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR CCA 90 bp CTGCCCTCCAAGCTCCTCCTGGTACATGGCATCCCTCCTCTCAGCCTCCTGTTGCTTGCTCCTCCCTTCTaGCCACAAGGGTCACTTCTG +
Preference number: 4 (lower is better)
Translates to: LPSKLLLVHGIPPLSLLLLAPPF*PQGSLL
Trigger: CAGAAGTGACCCTTGTGGCCAGAAGGGAGGAGCAAG...CAACAGGAGGCTGAGAGGAGGGATGCCATGTACCAGGAGGAGCTTGGAGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR CCA 90 bp AGCAGCGGTCTCTCTTCTTGTAATCCATGGAGCAAGCATGGCAGAGCAGGCCTCCGCCTCTTCATGGCCTaGACCAAGTCCCGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: SSGLSSCNPWSKHGRAGLRLFMA*TKSRCP
Trigger: AGGGCAGCGGGACTTGGTCCAGGCCATGAAGAGGCG...GAGGCCTGCTCTGCCATGCTTGCTCCATGGATTACAAGAAGAGAGACCGCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp CAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTCTTGGTCAGGTGACCTaGGCTTCTCTTCCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: QGCWGLIHSHGFAEPRGTLGQVT*ASLPWA
Trigger: CGCCCAGGGAAGAGAAGCCCAGGTCACCTGACCAAG...AGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp GCTGCCCTCCAAGCTCCTCCTGGTACATGGCATCCCTCCTCTCAGCCTCCTGTTAGGCCAGTCATGGGCTaGTCTTGGTCTTGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: AALQAPPGTWHPSSQPPVRPVMG*SWSWSG
Trigger: ACCTGACCAAGACCAAGACCAGCCCATGACTGGCCT...AACAGGAGGCTGAGAGGAGGGATGCCATGTACCAGGAGGAGCTTGGAGGGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR CCA 90 bp CCCTTCTGGCTCCCACATGCTCTGGGGGTACCTATGTTTCCTGGAACTTTCCCCGCTACGGGCAGGGAGTaGATTGAGTGGGATGGGCAG +
Preference number: 4 (lower is better)
Translates to: PFWLPHALGVPMFPGTFPATGRE*IEWDGQ
Trigger: CTGCCCATCCCACTCAATCCACTCCCTGCCCGTAGC...GGGGAAAGTTCCAGGAAACATAGGTACCCCCAGAGCATGTGGGAGCCAGAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR CCA 90 bp CCAGCTGCTGTCCACTGGGTGCATCTTGCAGACAGATGGCTTGACTGGTGTGTGTCCTGTGCCCAGCAATaGGCCAGGTGGGTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: PAAVHWVHLADRWLDWCVSCAQQ*ARWVSQ
Trigger: CTGGGAAACCCACCTGGCCCATTGCTGGGCACAGGA...CACACACCAGTCAAGCCATCTGTCTGCAAGATGCACCCAGTGGACAGCAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR CCA 90 bp GTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGAGGTCCACCTGAGTGCTaGTCACCAGTGCCGAATCCC +
Preference number: 4 (lower is better)
Translates to: VRAAGVLSTVMDLLSPEGGPPEC*SPVPNP
Trigger: GGGATTCGGCACTGGTGACCAGCACTCAGGTGGACC...TCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR TCA 90 bp GGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTTTACCAGGCAGAAGCGGATaGAGGCACGGCCTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: GCWGLIHSHGFAEPRGTLPGRSG*RHGLSP
Trigger: TGGGGAAAGGCCGTGCCTTCATCCGCTTCTGCCTGG...TAAAGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344321.8
ENST00000374155.7
CDS-3UTR TCA 90 bp AGCTGGCACTTCCCCAAGTGGGCGCTGAGGTCATGGAGTTCCAGCATCTTCAGGCGAAGGCCACCCCATTaGGAGCATAGAGAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: SWHFPKWALRSWSSSIFRRRPPH*EHRESP
Trigger: TGGACTCTCTCTATGCTCTCAATGGGGTGGCCTTCG...CCTGAAGATGCTGGAACTCCATGACCTCAGCGCCCACTTGGGGAAGTGCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374155.7
CDS-3UTR TCA 90 bp TGTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGCCTATCACCTCCTTCTaGGTGCCCATAGCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: CQGCWGLIHSHGFAEPRGPITSF*VPIAPF
Trigger: GAAGGGGGCTATGGGCACTCAGAAGGAGGTGATAGG...CCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR TCA 90 bp AGCAGCGGTCTCTCTTCTTGTAATCCATGGAGCAAGCATGGCAGAGCAGGCCTCTCGGCTCTCTCTTCCTaGCACCTGCTGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SSGLSSCNPWSKHGRAGLSALSS*HLLSCS
Trigger: GGAGCAGCTCAGCAGGTGTCAGGAAGAGAGAGCCGA...GAGGCCTGCTCTGCCATGCTTGCTCCATGGATTACAAGAAGAGAGACCGCTGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR TCA 90 bp AAATGTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGCTGAGCGGTCCACCTaGGTGCTGGTCACCAGTGCC +
Preference number: 4 (lower is better)
Translates to: KCQGCWGLIHSHGFAEPRAERST*VLVTSA
Trigger: GGCACTGGTGACCAGCACTCAGGTGGACCGCTCAGC...TCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGACATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR GCA 90 bp CACAGTCATGGATTTGCTGAGCCCAGAGGGACTTTAGAGAGGATGGGGCCCAACTCCCCTGTCCCTGGGTaGTGGGTGTTGAGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: HSHGFAEPRGTLERMGPNSPVPG*WVLSSP
Trigger: TGGGGAACTCAACACCCAGCACCCAGGGACAGGGGA...GTTGGGCCCCATCCTCTCTAAAGTCCCTCTGGGCTCAGCAAATCCATGACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp AGCAGCGGTCTCTCTTCTTGTAATCCATGGAGCAAGCATGGCAGAGCAGGCCTCTCCCCTGTCCCTGGGTaGTGGGTGTTGAGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: SSGLSSCNPWSKHGRAGLSPVPG*WVLSSP
Trigger: TGGGGAACTCAACACCCAGCACCCAGGGACAGGGGA...GAGGCCTGCTCTGCCATGCTTGCTCCATGGATTACAAGAAGAGAGACCGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp AGCTGCTGGAGAGTCCAAGATAGTGCAGGCTTCACTTCTCGTGAATCAGGAAAGTCCTGGCGCTGGGCCTaGTCCTCAGCCTTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: SCWRVQDSAGFTSRESGKSWRWA*SSAFRS
Trigger: GCTCCGGAAGGCTGAGGAGCAGGCCCAGCGCCAGGA...CTTTCCTGATTCACGAGAAGTGAAGCCTGCACTATCTTGGACTCTCCAGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp CAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTAGATGCTGGAGCCTCTaGCACAGGCGGTCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: QGCWGLIHSHGFAEPRGTRCWSL*HRRSFS
Trigger: AGAGAAGGACCGCCTGTGGCAGAGGCTCCAGCATCT...AGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp AGCAGCGGTCTCTCTTCTTGTAATCCATGGAGCAAGCATGGCAGAGCAGGCCTCCCCCACACCCTACTCTaGCCACAGAAGTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: SSGLSSCNPWSKHGRAGLPHTLL*PQKCWC
Trigger: GCACCAGCACTTCTGTGGGCAGAGTAGGGTGTGGGG...GAGGCCTGCTCTGCCATGCTTGCTCCATGGATTACAAGAAGAGAGACCGCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp CACAGTCATGGATTTGCTGAGCCCAGAGGGACTTTAGAGAGGATGGGGCCCAACTCCAGGTCTGGCTGCTaGAGGTCCAACTCGAAGGCC +
Preference number: 4 (lower is better)
Translates to: HSHGFAEPRGTLERMGPNSRSGC*RSNSKA
Trigger: GGCCTTCGAGTTGGACCTCCAGCAGCCAGACCTGGA...GTTGGGCCCCATCCTCTCTAAAGTCCCTCTGGGCTCAGCAAATCCATGACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp AGCAGCGGTCTCTCTTCTTGTAATCCATGGAGCAAGCATGGCAGAGCAGGCCTCTCCAGGTCTGGCTGCTaGAGGTCCAACTCGAAGGCC +
Preference number: 4 (lower is better)
Translates to: SSGLSSCNPWSKHGRAGLSRSGC*RSNSKA
Trigger: GGCCTTCGAGTTGGACCTCCAGCAGCCAGACCTGGA...GAGGCCTGCTCTGCCATGCTTGCTCCATGGATTACAAGAAGAGAGACCGCTGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp CACAGGCGGTCCTTCTCTTGGATCAGTTCCAACACCCGCCTCTTCATGGCCTGGGTGACTCTGAGAACATaGGCCAGGCTCCATCCAGGT +
Preference number: 4 (lower is better)
Translates to: HRRSFSWISSNTRLFMAWVTLRT*ARLHPG
Trigger: ACCTGGATGGAGCCTGGCCCATGTTCTCAGAGTCAC...CCAGGCCATGAAGAGGCGGGTGTTGGAACTGATCCAAGAGAAGGACCGCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR CCA 90 bp AGCTGGCACTTCCCCAAGTGGGCGCTGAGGTCATGGAGTTCCAGCATCTTCAGGGGGTTTGGGTGGAACTaGAGCAGCGTGACTCTGAGA +
Preference number: 4 (lower is better)
Translates to: SWHFPKWALRSWSSSIFRGFGWN*SSVTLR
Trigger: TCTCAGAGTCACGCTGCTCCAGTTCCACCCAAACCC...CCTGAAGATGCTGGAACTCCATGACCTCAGCGCCCACTTGGGGAAGTGCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374155.7
CDS-3UTR CCA 90 bp TTGCTACAGGCCACACAGCACTCGGGAGCCATGGAAGAGAGATGCTGGAGCCTCAGGCGGTCCTTCTCTTaGATCAGTTCCAACACCCGC +
Preference number: 4 (lower is better)
Translates to: LLQATQHSGAMEERCWSLRRSFS*ISSNTR
Trigger: GCGGGTGTTGGAACTGATCCAAGAGAAGGACCGCCT...GAGGCTCCAGCATCTCTCTTCCATGGCTCCCGAGTGCTGTGTGGCCTGTAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR CCA 90 bp CAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTATGGAAGAGAGATGCTaGAGCCTCTGCCACAGGCGG +
Preference number: 4 (lower is better)
Translates to: QGCWGLIHSHGFAEPRGTMEERC*SLCHRR
Trigger: CCGCCTGTGGCAGAGGCTCCAGCATCTCTCTTCCAT...AGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp CCAGCTGCTGTCCACTGGGTGCATCTTGCAGACAGATGGCTTGACTGGTGTGTGATGGAAGAGAGATGCTaGAGCCTCTGCCACAGGCGG +
Preference number: 4 (lower is better)
Translates to: PAAVHWVHLADRWLDWCVMEERC*SLCHRR
Trigger: CCGCCTGTGGCAGAGGCTCCAGCATCTCTCTTCCAT...CACACACCAGTCAAGCCATCTGTCTGCAAGATGCACCCAGTGGACAGCAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR CCA 90 bp CAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTAGCACTCGGGAGCCATaGAAGAGAGATGCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: QGCWGLIHSHGFAEPRGTSTREP*KRDAGA
Trigger: GGCTCCAGCATCTCTCTTCCATGGCTCCCGAGTGCT...AGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp GGGTGGGCAGCAGCGGTCTCTCTTCTTGTAATCCATGGAGCAAGCATGGCAGAGTCCATGGAGCAAGCATaGCAGAGCAGGCCTCCACAG +
Preference number: 4 (lower is better)
Translates to: GWAAAVSLLVIHGASMAESMEQA*QSRPPQ
Trigger: CTGTGGAGGCCTGCTCTGCCATGCTTGCTCCATGGA...CTCTGCCATGCTTGCTCCATGGATTACAAGAAGAGAGACCGCTGCTGCCCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp GTTCCAACACCCGCCTCTTCATGGCCTGGACCAAGTCCCGCTGCCCTCCAAGCTTGCCCACAGAAGTGCTaGTGCCTTAGATCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: VPTPASSWPGPSPAALQACPQKC*CLRSSV
Trigger: CACTGAAGATCTAAGGCACCAGCACTTCTGTGGGCA...AGCTTGGAGGGCAGCGGGACTTGGTCCAGGCCATGAAGAGGCGGGTGTTGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR CCA 90 bp CACAGTCATGGATTTGCTGAGCCCAGAGGGACTTTAGAGAGGATGGGGCCCAACGCCTCCACCTCCACATaGCAGCTTCTCCTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: HSHGFAEPRGTLERMGPNASTST*QLLLVA
Trigger: AGCCACCAGGAGAAGCTGCCATGTGGAGGTGGAGGC...GTTGGGCCCCATCCTCTCTAAAGTCCCTCTGGGCTCAGCAAATCCATGACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374155.7
CDS-3UTR CCA 90 bp CTTCTCGTGAATCAGGAAAGGTGGGCACCGCTGCTGGGTGAGTGGGGAGTGTGGCCAGTGGAATGCCCTTaGTTTGTCTCAGGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: LLVNQERWAPLLGEWGVWPVECP*FVSGGL
Trigger: GAGACCTCCTGAGACAAACCAAGGGCATTCCACTGG...CCACACTCCCCACTCACCCAGCAGCGGTGCCCACCTTTCCTGATTCACGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374155.7
CDS-3UTR CCA 90 bp GGGTGGGCAGCAGCGGTCTCTCTTCTTGTAATCCATGGAGCAAGCATGGCAGAGTGGCACTTCCCCAAGTaGGCGCTGAGGTCATGGAGT +
Preference number: 4 (lower is better)
Translates to: GWAAAVSLLVIHGASMAEWHFPK*ALRSWS
Trigger: ACTCCATGACCTCAGCGCCCACTTGGGGAAGTGCCA...CTCTGCCATGCTTGCTCCATGGATTACAAGAAGAGAGACCGCTGCTGCCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374155.7
CDS-3UTR TCA 90 bp CAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTTTCCCTGGTGAGCTCTaGGTTCAGGAGGCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: QGCWGLIHSHGFAEPRGTFPGEL*VQEAKL
Trigger: CAGCTTTGCCTCCTGAACTCAGAGCTCACCAGGGAA...AGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344321.8
ENST00000374155.7
CDS-3UTR TCA 90 bp GTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACATACCATTCCCTGGTaGGCTCTGAGTTCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: VRAAGVLSTVMDLLSPEGHTIPW*ALSSGG
Trigger: GCCTCCTGAACTCAGAGCTCACCAGGGAATGGTATG...TCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344321.8
ENST00000374155.7
CDS-3UTR TCA 90 bp GTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACCCTCTGTTGTTCTCTaGCCCTCTGCAACCAGCAGA +
Preference number: 4 (lower is better)
Translates to: VRAAGVLSTVMDLLSPEGPSVVL*PSATSR
Trigger: TCTGCTGGTTGCAGAGGGTCAGAGAACAACAGAGGG...TCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR TCA 90 bp GTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGAAGCAGCCTCTGGACGTaGCTCCACTCTGCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: VRAAGVLSTVMDLLSPEGSSLWT*LHSASF
Trigger: AAAGGAAGCAGAGTGGAGTCACGTCCAGAGGCTGCT...TCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR TCA 90 bp GGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTTTACTTCCTGACACCTGCTaGGCTGCTCCCGAAGTGCCT +
Preference number: 4 (lower is better)
Translates to: GCWGLIHSHGFAEPRGTLLPDTC*AAPEVP
Trigger: AGGCACTTCGGGAGCAGCTCAGCAGGTGTCAGGAAG...TAAAGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp TCCTCAGCCTTCCGGAGCCCAAGTCTGAGGCTCTTGATCTCGTCCTGCAGGGACCCCAGGAAGCTCTTCTaGTCTTTCTGGTCAAACTGC +
Preference number: 4 (lower is better)
Translates to: SSAFRSPSLRLLISSCRDPRKLF*SFWSNC
Trigger: GCAGTTTGACCAGAAAGAGCAGAAGAGCTTCCTGGG...GTCCCTGCAGGACGAGATCAAGAGCCTCAGACTTGGGCTCCGGAAGGCTGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR GCA 90 bp GGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTTTATTCAGGAGGCAAAGCTaGAGGGCCTCAGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GCWGLIHSHGFAEPRGTLFRRQS*RASASC
Trigger: GCAGCTGGCTGAGGCCCTGCAGCTTTGCCTCCTGAA...TAAAGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344321.8
ENST00000374155.7
CDS-3UTR GCA 90 bp CACAGGCGGTCCTTCTCTTGGATCAGTTCCAACACCCGCCTCTTCATGGCCTGGTTCAGGCCCTCCATATaGGGCTGGGATCTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: HRRSFSWISSNTRLFMAWFRPSI*GWDLLW
Trigger: CCAAAGAAGATCCCAGCCGCATATGGAGGGCCTGAA...CCAGGCCATGAAGAGGCGGGTGTTGGAACTGATCCAAGAGAAGGACCGCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR GCA 90 bp GCAGCGGTCTCTCTTCTTGTAATCCATGGAGCAAGCATGGCAGAGCAGGCCTCCCTGCTGTCCACTGGGTaGATCTTGCAGACAGATGGC +
Preference number: 4 (lower is better)
Translates to: AAVSLLVIHGASMAEQASLLSTG*ILQTDG
Trigger: GCCATCTGTCTGCAAGATGCACCCAGTGGACAGCAG...GGAGGCCTGCTCTGCCATGCTTGCTCCATGGATTACAAGAAGAGAGACCGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp GCTGCCCTCCAAGCTCCTCCTGGTACATGGCATCCCTCCTCTCAGCCTCCTGTTAGAGTCTTCCTTTGTTaGGTGTCCCTGAAGGACCCA +
Preference number: 4 (lower is better)
Translates to: AALQAPPGTWHPSSQPPVRVFLC*VSLKDP
Trigger: TGGGTCCTTCAGGGACACGCAACAAAGGAAGACTCT...AACAGGAGGCTGAGAGGAGGGATGCCATGTACCAGGAGGAGCTTGGAGGGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR GCA 90 bp CAGGTGGGAGGCCAGTCATGGGCTGGTCTTGGTCTTGGTCAGGTGACCTGGGCTAGGGTCACTTCTGTTTaGACTTGTGGATTCTCCACG +
Preference number: 4 (lower is better)
Translates to: QVGGQSWAGLGLGQVTWARVTSV*TCGFST
Trigger: CGTGGAGAATCCACAAGTGCAAACAGAAGTGACCCT...AGCCCAGGTCACCTGACCAAGACCAAGACCAGCCCATGACTGGCCTCCCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp AAATGTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGATGGACCAAGTCCCGCTaGCCTCCAAGCTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: KCQGCWGLIHSHGFAEPRWTKSR*PPSSSW
Trigger: CCAGGAGGAGCTTGGAGGGCAGCGGGACTTGGTCCA...TCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGACATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp AGCAGCGGTCTCTCTTCTTGTAATCCATGGAGCAAGCATGGCAGAGCAGGCCTCAGATGCTGGAGCCTCTaGCACAGGCGGTCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SSGLSSCNPWSKHGRAGLRCWSL*HRRSFS
Trigger: AGAGAAGGACCGCCTGTGGCAGAGGCTCCAGCATCT...GAGGCCTGCTCTGCCATGCTTGCTCCATGGATTACAAGAAGAGAGACCGCTGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp AGCAGCGGTCTCTCTTCTTGTAATCCATGGAGCAAGCATGGCAGAGCAGGCCTCGCCATGGAAGAGAGATaGTGGAGCCTCTGCCACAGG +
Preference number: 4 (lower is better)
Translates to: SSGLSSCNPWSKHGRAGLAMEER*WSLCHR
Trigger: CCTGTGGCAGAGGCTCCAGCATCTCTCTTCCATGGC...GAGGCCTGCTCTGCCATGCTTGCTCCATGGATTACAAGAAGAGAGACCGCTGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp CTTCTCGTGAATCAGGAAAGGTGGGCACCGCTGCTGGGTGAGTGGGGAGTGTGGATCGGCCAAAGATCTTaGTACAGGCCACACAGCACT +
Preference number: 4 (lower is better)
Translates to: LLVNQERWAPLLGEWGVWIGQRS*YRPHST
Trigger: AGTGCTGTGTGGCCTGTAGCAAGATCTTTGGCCGAT...CCACACTCCCCACTCACCCAGCAGCGGTGCCCACCTTTCCTGATTCACGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp CAGGTGGGAGGCCAGTCATGGGCTGGTCTTGGTCTTGGTCAGGTGACCTGGGCTCTCCCTCTTCTGCCATaGGTACTTGGAAATGATGTG +
Preference number: 4 (lower is better)
Translates to: QVGGQSWAGLGLGQVTWALPLLP*VLGNDV
Trigger: CACATCATTTCCAAGTACCCATGGCAGAAGAGGGAG...AGCCCAGGTCACCTGACCAAGACCAAGACCAGCCCATGACTGGCCTCCCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp CTGCCCTCCAAGCTCCTCCTGGTACATGGCATCCCTCCTCTCAGCCTCCTGTTGTGGGAACGGACAAAGTaGATTGGCTCCATGTTTCCC +
Preference number: 4 (lower is better)
Translates to: LPSKLLLVHGIPPLSLLLWERTK*IGSMFP
Trigger: GGGAAACATGGAGCCAATCCACTTTGTCCGTTCCCA...CAACAGGAGGCTGAGAGGAGGGATGCCATGTACCAGGAGGAGCTTGGAGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR CCA 90 bp GGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTTTAGTCTTCTTGGCGTTCTaGGCAGAGCAGAGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: GCWGLIHSHGFAEPRGTLVFLAF*AEQRAP
Trigger: CGGAGCCCTCTGCTCTGCCCAGAACGCCAAGAAGAC...TAAAGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp GCAGCGGTCTCTCTTCTTGTAATCCATGGAGCAAGCATGGCAGAGCAGGCCTCCTTCCCTGGGTTTGGGTaGAACTGGAGCAGCGTGACT +
Preference number: 4 (lower is better)
Translates to: AAVSLLVIHGASMAEQASFPGFG*NWSSVT
Trigger: AGTCACGCTGCTCCAGTTCCACCCAAACCCAGGGAA...GGAGGCCTGCTCTGCCATGCTTGCTCCATGGATTACAAGAAGAGAGACCGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp GTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACCCTCCATATGCGGCTaGGATCTTCTTTGGGGCATC +
Preference number: 4 (lower is better)
Translates to: VRAAGVLSTVMDLLSPEGPSICG*DLLWGI
Trigger: GATGCCCCAAAGAAGATCCCAGCCGCATATGGAGGG...TCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344321.8
ENST00000457754.6
CDS-3UTR CCA 90 bp TGTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGCCAGCTGCTGTCCACTaGGTGCATCTTGCAGACAGA +
Preference number: 4 (lower is better)
Translates to: CQGCWGLIHSHGFAEPRGPAAVH*VHLADR
Trigger: TCTGTCTGCAAGATGCACCCAGTGGACAGCAGCTGG...CCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp CTGGGTGTTGAGTTCCCCAGGAAGATCTCAATCCATGGGGCTCTTTCCTCCTGGAGATGCCTTTGTTGCTaGGACCTGGGAAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: LGVEFPRKISIHGALSSWRCLCC*DLGSPA
Trigger: GGCAGGGCTTCCCAGGTCCCAGCAACAAAGGCATCT...CCAGGAGGAAAGAGCCCCATGGATTGAGATCTTCCTGGGGAACTCAACACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR CCA 90 bp CTTCTCGTGAATCAGGAAAGGTGGGCACCGCTGCTGGGTGAGTGGGGAGTGTGGGAAGATCTCAATCCATaGGGCTCTTTCCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: LLVNQERWAPLLGEWGVWEDLNP*GSFLLV
Trigger: GACCAGGAGGAAAGAGCCCCATGGATTGAGATCTTC...CCACACTCCCCACTCACCCAGCAGCGGTGCCCACCTTTCCTGATTCACGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp CAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTAGGCGGTCCTTCTCTTaGATCAGTTCCAACACCCGC +
Preference number: 4 (lower is better)
Translates to: QGCWGLIHSHGFAEPRGTRRSFS*ISSNTR
Trigger: GCGGGTGTTGGAACTGATCCAAGAGAAGGACCGCCT...AGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp CACAGTCATGGATTTGCTGAGCCCAGAGGGACTTTAGAGAGGATGGGGCCCAACATGGAAGAGAGATGCTaGAGCCTCTGCCACAGGCGG +
Preference number: 4 (lower is better)
Translates to: HSHGFAEPRGTLERMGPNMEERC*SLCHRR
Trigger: CCGCCTGTGGCAGAGGCTCCAGCATCTCTCTTCCAT...GTTGGGCCCCATCCTCTCTAAAGTCCCTCTGGGCTCAGCAAATCCATGACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp AGCTGCTGGAGAGTCCAAGATAGTGCAGGCTTCACTTCTCGTGAATCAGGAAAGTGGGCTTCTCTTCCCTaGGCGCAGGGTGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SCWRVQDSAGFTSRESGKWASLP*AQGGQQ
Trigger: CTGCTGCCCACCCTGCGCCCAGGGAAGAGAAGCCCA...CTTTCCTGATTCACGAGAAGTGAAGCCTGCACTATCTTGGACTCTCCAGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp AGTCATGGATTTGCTGAGCCCAGAGGGACTTTAGAGAGGATGGGGCCCAACTCTGCTACGGGCAGGGAGTaGATTGAGTGGGATGGGCAG +
Preference number: 4 (lower is better)
Translates to: SHGFAEPRGTLERMGPNSATGRE*IEWDGQ
Trigger: CTGCCCATCCCACTCAATCCACTCCCTGCCCGTAGC...AGAGTTGGGCCCCATCCTCTCTAAAGTCCCTCTGGGCTCAGCAAATCCATGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp AGCAGCGGTCTCTCTTCTTGTAATCCATGGAGCAAGCATGGCAGAGCAGGCCTCGACAAACAAGAGGGCTaGGAAGAGCTACGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SSGLSSCNPWSKHGRAGLDKQEG*EELRAG
Trigger: CCCTGCCCGTAGCTCTTCCCAGCCCTCTTGTTTGTC...GAGGCCTGCTCTGCCATGCTTGCTCCATGGATTACAAGAAGAGAGACCGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp CAGGCAGGTGGGAGGCCAGTCATGGGCTGGTCTTGGTCTTGGTCAGGTGACCTGAAATGTCAGGGCTGCTaGGGTCTTATCCACAGTCAT +
Preference number: 4 (lower is better)
Translates to: QAGGRPVMGWSWSWSGDLKCQGC*GLIHSH
Trigger: ATGACTGTGGATAAGACCCCAGCAGCCCTGACATTT...CAGGTCACCTGACCAAGACCAAGACCAGCCCATGACTGGCCTCCCACCTGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp AGCTGGCACTTCCCCAAGTGGGCGCTGAGGTCATGGAGTTCCAGCATCTTCAGGGGTCCTAGCACTGCATaGATACCGCCGAGAAAATCG +
Preference number: 4 (lower is better)
Translates to: SWHFPKWALRSWSSSIFRGPSTA*IPPRKS
Trigger: CGATTTTCTCGGCGGTATCCATGCAGTGCTAGGACC...CCTGAAGATGCTGGAACTCCATGACCTCAGCGCCCACTTGGGGAAGTGCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374155.7
CDS-3UTR TCA 90 bp CTGGGTGTTGAGTTCCCCAGGAAGATCTCAATCCATGGGGCTCTTTCCTCCTGGAGCAGCCTCTGGACGTaGCTCCACTCTGCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: LGVEFPRKISIHGALSSWSSLWT*LHSASF
Trigger: AAAGGAAGCAGAGTGGAGTCACGTCCAGAGGCTGCT...CCAGGAGGAAAGAGCCCCATGGATTGAGATCTTCCTGGGGAACTCAACACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR TCA 90 bp CAGGTGGGAGGCCAGTCATGGGCTGGTCTTGGTCTTGGTCAGGTGACCTGGGCTCTTCAGTGTCTAGAATaGGGACTGGACAAACAAGAG +
Preference number: 4 (lower is better)
Translates to: QVGGQSWAGLGLGQVTWALQCLE*GLDKQE
Trigger: CTCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAG...AGCCCAGGTCACCTGACCAAGACCAAGACCAGCCCATGACTGGCCTCCCACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR TCA 90 bp GCAGCGGTCTCTCTTCTTGTAATCCATGGAGCAAGCATGGCAGAGCAGGCCTCCAGGCTTCACTTCTCGTaGATCAGGAAAGGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: AAVSLLVIHGASMAEQASRLHFS*IRKGGH
Trigger: GTGCCCACCTTTCCTGATTCACGAGAAGTGAAGCCT...GGAGGCCTGCTCTGCCATGCTTGCTCCATGGATTACAAGAAGAGAGACCGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp AGCTGGCACTTCCCCAAGTGGGCGCTGAGGTCATGGAGTTCCAGCATCTTCAGGGATGGCTCCCTCTTCTaGCATGGGTACTTGGAAATG +
Preference number: 4 (lower is better)
Translates to: SWHFPKWALRSWSSSIFRDGSLF*HGYLEM
Trigger: CATTTCCAAGTACCCATGGCAGAAGAGGGAGCCATC...CCTGAAGATGCTGGAACTCCATGACCTCAGCGCCCACTTGGGGAAGTGCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374155.7
CDS-3UTR GCA 90 bp GCAGCGGTCTCTCTTCTTGTAATCCATGGAGCAAGCATGGCAGAGCAGGCCTCCGCCGTCGTAGGGCAGTaGAGAGAAAGTCCCAGTAAT +
Preference number: 4 (lower is better)
Translates to: AAVSLLVIHGASMAEQASAVVGQ*RESPSN
Trigger: ATTACTGGGACTTTCTCTGCACTGCCCTACGACGGC...GGAGGCCTGCTCTGCCATGCTTGCTCCATGGATTACAAGAAGAGAGACCGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp CAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTTTCAGGCCCTCCATATaGGGCTGGGATCTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: QGCWGLIHSHGFAEPRGTFRPSI*GWDLLW
Trigger: CCAAAGAAGATCCCAGCCGCATATGGAGGGCCTGAA...AGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344321.8
ENST00000457754.6
CDS-3UTR GCA 90 bp CACAGTCATGGATTTGCTGAGCCCAGAGGGACTTTAGAGAGGATGGGGCCCAACCTGCTGTCCACTGGGTaGATCTTGCAGACAGATGGC +
Preference number: 4 (lower is better)
Translates to: HSHGFAEPRGTLERMGPNLLSTG*ILQTDG
Trigger: GCCATCTGTCTGCAAGATGCACCCAGTGGACAGCAG...GTTGGGCCCCATCCTCTCTAAAGTCCCTCTGGGCTCAGCAAATCCATGACTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp AGAGATGCTGGAGCCTCTGCCACAGGCGGTCCTTCTCTTGGATCAGTTCCAACAGGAAGATGCCTTTGTTaGTGGGACCTGGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: RDAGASATGGPSLGSVPTGRCLC*WDLGSP
Trigger: AGGGCTTCCCAGGTCCCAGCAACAAAGGCATCTTCC...TGTTGGAACTGATCCAAGAGAAGGACCGCCTGTGGCAGAGGCTCCAGCATCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR GCA 90 bp CAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTTGTTCTCTGACCCTCTaGAACCAGCAGAACCCCTGT +
Preference number: 4 (lower is better)
Translates to: QGCWGLIHSHGFAEPRGTCSLTL*NQQNPC
Trigger: ACAGGGGTTCTGCTGGTTGCAGAGGGTCAGAGAACA...AGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp TGTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGTGTTCTCTGACCCTCTaGAACCAGCAGAACCCCTGT +
Preference number: 4 (lower is better)
Translates to: CQGCWGLIHSHGFAEPRGCSLTL*NQQNPC
Trigger: ACAGGGGTTCTGCTGGTTGCAGAGGGTCAGAGAACA...CCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp GGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTTTAAGATGCTGGAGCCTCTaGCACAGGCGGTCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: GCWGLIHSHGFAEPRGTLRCWSL*HRRSFS
Trigger: AGAGAAGGACCGCCTGTGGCAGAGGCTCCAGCATCT...TAAAGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp CTTCTCGTGAATCAGGAAAGGTGGGCACCGCTGCTGGGTGAGTGGGGAGTGTGGCCACAGAAGTGCTGGTaGCTTAGATCTTCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: LLVNQERWAPLLGEWGVWPQKCW*LRSSVS
Trigger: AGACACTGAAGATCTAAGGCACCAGCACTTCTGTGG...CCACACTCCCCACTCACCCAGCAGCGGTGCCCACCTTTCCTGATTCACGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp CACAGGCGGTCCTTCTCTTGGATCAGTTCCAACACCCGCCTCTTCATGGCCTGGGAGAAATGTCAGGGCTaGTGGGGTCTTATCCACAGT +
Preference number: 4 (lower is better)
Translates to: HRRSFSWISSNTRLFMAWEKCQG*WGLIHS
Trigger: ACTGTGGATAAGACCCCAGCAGCCCTGACATTTCTC...CCAGGCCATGAAGAGGCGGGTGTTGGAACTGATCCAAGAGAAGGACCGCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR GCA 90 bp CAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTAGTGCTGGTCACCAGTaGCGAATCCCTAGTCCTGAT +
Preference number: 4 (lower is better)
Translates to: QGCWGLIHSHGFAEPRGTSAGHQ*RIPSPD
Trigger: ATCAGGACTAGGGATTCGGCACTGGTGACCAGCACT...AGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR GCA 90 bp GGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTTTAGGGAACCGCAGACGCTaGAGGGAAGAAGTGGTAGAG +
Preference number: 4 (lower is better)
Translates to: GCWGLIHSHGFAEPRGTLGNRRR*REEVVE
Trigger: CTCTACCACTTCTTCCCTGCAGCGTCTGCGGTTCCC...TAAAGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR CCA 90 bp GTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGATCCAGGATGTCTTCTTaGCGTTCTGGGCAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: VRAAGVLSTVMDLLSPEGSRMSS*RSGQSR
Trigger: TCTGCTCTGCCCAGAACGCCAAGAAGACATCCTGGA...TCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp CACAGTCATGGATTTGCTGAGCCCAGAGGGACTTTAGAGAGGATGGGGCCCAACGTGACTCTGAGAACATaGGCCAGGCTCCATCCAGGT +
Preference number: 4 (lower is better)
Translates to: HSHGFAEPRGTLERMGPNVTLRT*ARLHPG
Trigger: ACCTGGATGGAGCCTGGCCCATGTTCTCAGAGTCAC...GTTGGGCCCCATCCTCTCTAAAGTCCCTCTGGGCTCAGCAAATCCATGACTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp AGTCATGGATTTGCTGAGCCCAGAGGGACTTTAGAGAGGATGGGGCCCAACTCTCTGGGTCTCCTTCCCTaGGTTTGGGTGGAACTGGAG +
Preference number: 4 (lower is better)
Translates to: SHGFAEPRGTLERMGPNSLGLLP*VWVELE
Trigger: CTCCAGTTCCACCCAAACCCAGGGAAGGAGACCCAG...AGAGTTGGGCCCCATCCTCTCTAAAGTCCCTCTGGGCTCAGCAAATCCATGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp CTTCTCGTGAATCAGGAAAGGTGGGCACCGCTGCTGGGTGAGTGGGGAGTGTGGCATCTTGCAGACAGATaGCTTGACTGGTGTGTGAGT +
Preference number: 4 (lower is better)
Translates to: LLVNQERWAPLLGEWGVWHLADR*LDWCVS
Trigger: ACTCACACACCAGTCAAGCCATCTGTCTGCAAGATG...CCACACTCCCCACTCACCCAGCAGCGGTGCCCACCTTTCCTGATTCACGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp GGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTTTATTTGTTGCTGGGACCTaGGAAGCCCTGCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GCWGLIHSHGFAEPRGTLFVAGT*EALPAA
Trigger: AGCAGCTGGCAGGGCTTCCCAGGTCCCAGCAACAAA...TAAAGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp AGTCATGGATTTGCTGAGCCCAGAGGGACTTTAGAGAGGATGGGGCCCAACTCTAGATGCCTTTGTTGCTaGGACCTGGGAAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: SHGFAEPRGTLERMGPNSRCLCC*DLGSPA
Trigger: GGCAGGGCTTCCCAGGTCCCAGCAACAAAGGCATCT...AGAGTTGGGCCCCATCCTCTCTAAAGTCCCTCTGGGCTCAGCAAATCCATGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp TTGCTACAGGCCACACAGCACTCGGGAGCCATGGAAGAGAGATGCTGGAGCCTCGAAGATCTCAATCCATaGGGCTCTTTCCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: LLQATQHSGAMEERCWSLEDLNP*GSFLLV
Trigger: GACCAGGAGGAAAGAGCCCCATGGATTGAGATCTTC...GAGGCTCCAGCATCTCTCTTCCATGGCTCCCGAGTGCTGTGTGGCCTGTAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR CCA 90 bp CAGGCAGGTGGGAGGCCAGTCATGGGCTGGTCTTGGTCTTGGTCAGGTGACCTGTTCTGTTTGCACTTGTaGATTCTCCACGGTAGAGTC +
Preference number: 4 (lower is better)
Translates to: QAGGRPVMGWSWSWSGDLFCLHL*ILHGRV
Trigger: GACTCTACCGTGGAGAATCCACAAGTGCAAACAGAA...CAGGTCACCTGACCAAGACCAAGACCAGCCCATGACTGGCCTCCCACCTGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp AGCCATGGAAGAGAGATGCTGGAGCCTCTGCCACAGGCGGTCCTTCTCTTGGATTCCACAGAGCCTGCATaGATACCGCCGAGAAAATCG +
Preference number: 4 (lower is better)
Translates to: SHGREMLEPLPQAVLLLDSTEPA*IPPRKS
Trigger: CGATTTTCTCGGCGGTATCCATGCAGGCTCTGTGGA...ATCCAAGAGAAGGACCGCCTGTGGCAGAGGCTCCAGCATCTCTCTTCCATGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR CCA 90 bp AAATGTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGACTTGGTCAGGTGACCTaGGCTTCTCTTCCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: KCQGCWGLIHSHGFAEPRLGQVT*ASLPWA
Trigger: CGCCCAGGGAAGAGAAGCCCAGGTCACCTGACCAAG...TCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGACATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp CTGGGTGTTGAGTTCCCCAGGAAGATCTCAATCCATGGGGCTCTTTCCTCCTGGGTCATGGGCTGGTCTTaGTCTTGGTCAGGTGACCTG +
Preference number: 4 (lower is better)
Translates to: LGVEFPRKISIHGALSSWVMGWS*SWSGDL
Trigger: CAGGTCACCTGACCAAGACCAAGACCAGCCCATGAC...CCAGGAGGAAAGAGCCCCATGGATTGAGATCTTCCTGGGGAACTCAACACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR CCA 90 bp GGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTTTAGTGAATCAGGAAAGGTaGGCACCGCTGCTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: GCWGLIHSHGFAEPRGTLVNQER*APLLGE
Trigger: CTCACCCAGCAGCGGTGCCCACCTTTCCTGATTCAC...TAAAGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp CAGGTGGGAGGCCAGTCATGGGCTGGTCTTGGTCTTGGTCAGGTGACCTGGGCTTTTCTCATCTCCCAGTaGAATGCCCTTGGTTTGTCT +
Preference number: 4 (lower is better)
Translates to: QVGGQSWAGLGLGQVTWAFLISQ*NALGLS
Trigger: AGACAAACCAAGGGCATTCCACTGGGAGATGAGAAA...AGCCCAGGTCACCTGACCAAGACCAAGACCAGCCCATGACTGGCCTCCCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374155.7
CDS-3UTR CCA 90 bp GCTGCCCTCCAAGCTCCTCCTGGTACATGGCATCCCTCCTCTCAGCCTCCTGTTACCATTCCCTTGTCCTaGGAACGGACAAAGTGGATT +
Preference number: 4 (lower is better)
Translates to: AALQAPPGTWHPSSQPPVTIPLS*ERTKWI
Trigger: AATCCACTTTGTCCGTTCCCAGGACAAGGGAATGGT...AACAGGAGGCTGAGAGGAGGGATGCCATGTACCAGGAGGAGCTTGGAGGGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
3UTR CAA 72 bp CTGCATGGATACCGCCGAGAAAATCGGCCAAAGATCTaGCTACAGGCCACACAGCACTCGGGAGCCATGGAA +
Preference number: 4 (lower is better)
Translates to: LHGYRRENRPKI*LQATQHSGAME
Trigger: TTCCATGGCTCCCGAGTGCTGTGTGGCCTGTAGCAAGATCTTTGGCCGATTTTCTCGGCGGTATCCATGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR TCA 90 bp TGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAGGGCTGGGACCAGGCAGAAGCGGATaGAGGCACGGCCTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: CLRSSVSRMRTGQTRGLGPGRSG*RHGLSP
Trigger: TGGGGAAAGGCCGTGCCTTCATCCGCTTCTGCCTGG...TCCCAGCCCTCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344321.8
ENST00000374155.7
CDS-3UTR TCA 90 bp AGTCATGGATTTGCTGAGCCCAGAGGGACTTTAGAGAGGATGGGGCCCAACTCTTTCCCTGGTGAGCTCTaGGTTCAGGAGGCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: SHGFAEPRGTLERMGPNSFPGEL*VQEAKL
Trigger: CAGCTTTGCCTCCTGAACTCAGAGCTCACCAGGGAA...AGAGTTGGGCCCCATCCTCTCTAAAGTCCCTCTGGGCTCAGCAAATCCATGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344321.8
ENST00000374155.7
CDS-3UTR TCA 90 bp AGCCATGGAAGAGAGATGCTGGAGCCTCTGCCACAGGCGGTCCTTCTCTTGGATGGCTTGACTGGTGTGTaGGTCCTCAATCTGGACATT +
Preference number: 4 (lower is better)
Translates to: SHGREMLEPLPQAVLLLDGLTGV*VLNLDI
Trigger: AATGTCCAGATTGAGGACTCACACACCAGTCAAGCC...ATCCAAGAGAAGGACCGCCTGTGGCAGAGGCTCCAGCATCTCTCTTCCATGGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR TCA 90 bp GGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTTTACCCTCTGTTGTTCTCTaGCCCTCTGCAACCAGCAGA +
Preference number: 4 (lower is better)
Translates to: GCWGLIHSHGFAEPRGTLPSVVL*PSATSR
Trigger: TCTGCTGGTTGCAGAGGGTCAGAGAACAACAGAGGG...TAAAGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR TCA 90 bp TGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAGGGCTGGGATTTGTTGCGTGTCCCTaGAGGACCCAGGGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: CLRSSVSRMRTGQTRGLGFVACP*RTQGSP
Trigger: GGGGGAGCCCTGGGTCCTTCAGGGACACGCAACAAA...TCCCAGCCCTCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR TCA 90 bp CAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTCAGTCATGGATTTGCTaGGCCCAGAGGGACTTTAGA +
Preference number: 4 (lower is better)
Translates to: QGCWGLIHSHGFAEPRGTQSWIC*AQRDFR
Trigger: TCTAAAGTCCCTCTGGGCTCAGCAAATCCATGACTG...AGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR TCA 90 bp AGCTGCTGGAGAGTCCAAGATAGTGCAGGCTTCACTTCTCGTGAATCAGGAAAGAGAGGCAACTCAGAGTaGAGGCAGGGCAGAGGCACC +
Preference number: 4 (lower is better)
Translates to: SCWRVQDSAGFTSRESGKRGNSE*RQGRGT
Trigger: GGTGCCTCTGCCCTGCCTTCACTCTGAGTTGCCTCT...CTTTCCTGATTCACGAGAAGTGAAGCCTGCACTATCTTGGACTCTCCAGCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374155.7
CDS-3UTR TCA 90 bp AGCTGCTGGAGAGTCCAAGATAGTGCAGGCTTCACTTCTCGTGAATCAGGAAAGTCCCCAAGTGGGCGCTaGGGTCATGGAGTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SCWRVQDSAGFTSRESGKSPSGR*GHGVPA
Trigger: TGCTGGAACTCCATGACCTCAGCGCCCACTTGGGGA...CTTTCCTGATTCACGAGAAGTGAAGCCTGCACTATCTTGGACTCTCCAGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374155.7
CDS-3UTR GCA 90 bp CTGGGTGTTGAGTTCCCCAGGAAGATCTCAATCCATGGGGCTCTTTCCTCCTGGTCTTTCTGGTCAAACTaGAGCAGCAGCTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LGVEFPRKISIHGALSSWSFWSN*SSSSRQ
Trigger: CTGCCTGGAGCTGCTGCTGCAGTTTGACCAGAAAGA...CCAGGAGGAAAGAGCCCCATGGATTGAGATCTTCCTGGGGAACTCAACACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR GCA 90 bp AAATGTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGCCATGGAAGAGAGATaGTGGAGCCTCTGCCACAGG +
Preference number: 4 (lower is better)
Translates to: KCQGCWGLIHSHGFAEPRAMEER*WSLCHR
Trigger: CCTGTGGCAGAGGCTCCAGCATCTCTCTTCCATGGC...TCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGACATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp GCAGCGGTCTCTCTTCTTGTAATCCATGGAGCAAGCATGGCAGAGCAGGCCTCCCTCTGCCCACAGAAGTaGTGGTGCCTTAGATCTTCA +
Preference number: 4 (lower is better)
Translates to: AAVSLLVIHGASMAEQASLCPQK*WCLRSS
Trigger: TGAAGATCTAAGGCACCAGCACTTCTGTGGGCAGAG...GGAGGCCTGCTCTGCCATGCTTGCTCCATGGATTACAAGAAGAGAGACCGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp CCAGCTGCTGTCCACTGGGTGCATCTTGCAGACAGATGGCTTGACTGGTGTGTGCTCTGCCCACAGAAGTaGTGGTGCCTTAGATCTTCA +
Preference number: 4 (lower is better)
Translates to: PAAVHWVHLADRWLDWCVLCPQK*WCLRSS
Trigger: TGAAGATCTAAGGCACCAGCACTTCTGTGGGCAGAG...CACACACCAGTCAAGCCATCTGTCTGCAAGATGCACCCAGTGGACAGCAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR GCA 90 bp AGCTGCTGGAGAGTCCAAGATAGTGCAGGCTTCACTTCTCGTGAATCAGGAAAGCCCCACACCCTACTCTaGCCACAGAAGTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: SCWRVQDSAGFTSRESGKPHTLL*PQKCWC
Trigger: GCACCAGCACTTCTGTGGGCAGAGTAGGGTGTGGGG...CTTTCCTGATTCACGAGAAGTGAAGCCTGCACTATCTTGGACTCTCCAGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp GTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTAGTGACTCTGCCTTaGACAGCAGTCCCAGGATTT +
Preference number: 4 (lower is better)
Translates to: VRAAGVLSTVMDLLSPEGLVTLP*TAVPGF
Trigger: AAATCCTGGGACTGCTGTGCAAGGCAGAGTCACTAG...TCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp AGAGATGCTGGAGCCTCTGCCACAGGCGGTCCTTCTCTTGGATCAGTTCCAACAACGGACAAAGTGGATTaGCTCCATGTTTCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: RDAGASATGGPSLGSVPTTDKVD*LHVSPL
Trigger: CAGCGGGGAAACATGGAGCCAATCCACTTTGTCCGT...TGTTGGAACTGATCCAAGAGAAGGACCGCCTGTGGCAGAGGCTCCAGCATCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR CCA 90 bp CAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTTGGGAACGGACAAAGTaGATTGGCTCCATGTTTCCC +
Preference number: 4 (lower is better)
Translates to: QGCWGLIHSHGFAEPRGTWERTK*IGSMFP
Trigger: GGGAAACATGGAGCCAATCCACTTTGTCCGTTCCCA...AGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp GTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGATGGGAACGGACAAAGTaGATTGGCTCCATGTTTCCC +
Preference number: 4 (lower is better)
Translates to: VRAAGVLSTVMDLLSPEGWERTK*IGSMFP
Trigger: GGGAAACATGGAGCCAATCCACTTTGTCCGTTCCCA...TCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp AGTCATGGATTTGCTGAGCCCAGAGGGACTTTAGAGAGGATGGGGCCCAACTCTGTGACTCTGAGAACATaGGCCAGGCTCCATCCAGGT +
Preference number: 4 (lower is better)
Translates to: SHGFAEPRGTLERMGPNSVTLRT*ARLHPG
Trigger: ACCTGGATGGAGCCTGGCCCATGTTCTCAGAGTCAC...AGAGTTGGGCCCCATCCTCTCTAAAGTCCCTCTGGGCTCAGCAAATCCATGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp AGTCATGGATTTGCTGAGCCCAGAGGGACTTTAGAGAGGATGGGGCCCAACTCTGGGTTTGGGTGGAACTaGAGCAGCGTGACTCTGAGA +
Preference number: 4 (lower is better)
Translates to: SHGFAEPRGTLERMGPNSGFGWN*SSVTLR
Trigger: TCTCAGAGTCACGCTGCTCCAGTTCCACCCAAACCC...AGAGTTGGGCCCCATCCTCTCTAAAGTCCCTCTGGGCTCAGCAAATCCATGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp TTGCTACAGGCCACACAGCACTCGGGAGCCATGGAAGAGAGATGCTGGAGCCTCGACAGATGGCTTGACTaGTGTGTGAGTCCTCAATCT +
Preference number: 4 (lower is better)
Translates to: LLQATQHSGAMEERCWSLDRWLD*CVSPQS
Trigger: AGATTGAGGACTCACACACCAGTCAAGCCATCTGTC...GAGGCTCCAGCATCTCTCTTCCATGGCTCCCGAGTGCTGTGTGGCCTGTAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR CCA 90 bp AAATGTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGATCCATGGAGCAAGCATaGCAGAGCAGGCCTCCACAG +
Preference number: 4 (lower is better)
Translates to: KCQGCWGLIHSHGFAEPRSMEQA*QSRPPQ
Trigger: CTGTGGAGGCCTGCTCTGCCATGCTTGCTCCATGGA...TCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGACATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp CTTCTCGTGAATCAGGAAAGGTGGGCACCGCTGCTGGGTGAGTGGGGAGTGTGGTCTTCTTGTAATCCATaGAGCAAGCATGGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LLVNQERWAPLLGEWGVWSSCNP*SKHGRA
Trigger: TGCTCTGCCATGCTTGCTCCATGGATTACAAGAAGA...CCACACTCCCCACTCACCCAGCAGCGGTGCCCACCTTTCCTGATTCACGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp GCTGCCCTCCAAGCTCCTCCTGGTACATGGCATCCCTCCTCTCAGCCTCCTGTTTCTTCTTGTAATCCATaGAGCAAGCATGGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: AALQAPPGTWHPSSQPPVSSCNP*SKHGRA
Trigger: TGCTCTGCCATGCTTGCTCCATGGATTACAAGAAGA...AACAGGAGGCTGAGAGGAGGGATGCCATGTACCAGGAGGAGCTTGGAGGGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR CCA 90 bp AAATGTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGACAAACAAGAGGGCTaGGAAGAGCTACGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: KCQGCWGLIHSHGFAEPRDKQEG*EELRAG
Trigger: CCCTGCCCGTAGCTCTTCCCAGCCCTCTTGTTTGTC...TCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGACATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp CAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTTGCCCACAGAAGTGCTaGTGCCTTAGATCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: QGCWGLIHSHGFAEPRGTCPQKC*CLRSSV
Trigger: CACTGAAGATCTAAGGCACCAGCACTTCTGTGGGCA...AGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp ACTTCTGTTTGCACTTGTGGATTCTCCACGGTAGAGTCTTCCTTTGTTGCGTGTGGTGGGCACCGCTGCTaGGTGAGTGGGGAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: TSVCTCGFSTVESSFVACGGHRC*VSGECG
Trigger: TCCACACTCCCCACTCACCCAGCAGCGGTGCCCACC...ACACGCAACAAAGGAAGACTCTACCGTGGAGAATCCACAAGTGCAAACAGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR CCA 90 bp AAATGTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGTGAATCAGGAAAGGTaGGCACCGCTGCTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: KCQGCWGLIHSHGFAEPRVNQER*APLLGE
Trigger: CTCACCCAGCAGCGGTGCCCACCTTTCCTGATTCAC...TCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGACATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR TCA 90 bp AGAGATGCTGGAGCCTCTGCCACAGGCGGTCCTTCTCTTGGATCAGTTCCAACATTGCAACTTGGACTGTaGGCTCAGGAAGGACTTTCG +
Preference number: 4 (lower is better)
Translates to: RDAGASATGGPSLGSVPTLQLGL*AQEGLS
Trigger: CGAAAGTCCTTCCTGAGCTCACAGTCCAAGTTGCAA...TGTTGGAACTGATCCAAGAGAAGGACCGCCTGTGGCAGAGGCTCCAGCATCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR TCA 90 bp AAATGTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGACATACCATTCCCTGGTaGGCTCTGAGTTCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: KCQGCWGLIHSHGFAEPRHTIPW*ALSSGG
Trigger: GCCTCCTGAACTCAGAGCTCACCAGGGAATGGTATG...TCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGACATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344321.8
ENST00000374155.7
CDS-3UTR TCA 90 bp AAATGTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGACGAAGGCCACCCCATTaGGAGCATAGAGAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: KCQGCWGLIHSHGFAEPRRRPPH*EHRESP
Trigger: TGGACTCTCTCTATGCTCTCAATGGGGTGGCCTTCG...TCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGACATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR TCA 90 bp AGCAGCGGTCTCTCTTCTTGTAATCCATGGAGCAAGCATGGCAGAGCAGGCCTCGGCTTGACTGGTGTGTaGGTCCTCAATCTGGACATT +
Preference number: 4 (lower is better)
Translates to: SSGLSSCNPWSKHGRAGLGLTGV*VLNLDI
Trigger: AATGTCCAGATTGAGGACTCACACACCAGTCAAGCC...GAGGCCTGCTCTGCCATGCTTGCTCCATGGATTACAAGAAGAGAGACCGCTGCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR TCA 90 bp TGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAGGGCTGGGATCGGCTCTCTCTTCCTaGCACCTGCTGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: CLRSSVSRMRTGQTRGLGSALSS*HLLSCS
Trigger: GGAGCAGCTCAGCAGGTGTCAGGAAGAGAGAGCCGA...TCCCAGCCCTCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR TCA 90 bp GGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTTTAAGGCTTCACTTCTCGTaGATCAGGAAAGGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: GCWGLIHSHGFAEPRGTLRLHFS*IRKGGH
Trigger: GTGCCCACCTTTCCTGATTCACGAGAAGTGAAGCCT...TAAAGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp CTGCCCTCCAAGCTCCTCCTGGTACATGGCATCCCTCCTCTCAGCCTCCTGTTGAATGATGTGATTCCTTaGAACTTGGACTGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: LPSKLLLVHGIPPLSLLLNDVIP*NLDCEL
Trigger: GAGCTCACAGTCCAAGTTGCAAGGAATCACATCATT...CAACAGGAGGCTGAGAGGAGGGATGCCATGTACCAGGAGGAGCTTGGAGGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR GCA 90 bp TGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAGGGCTGGGATCCATGTTTCCCCGCTaGCGTCGTAGGGCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: CLRSSVSRMRTGQTRGLGSMFPR*RRRAVQ
Trigger: CTGCACTGCCCTACGACGGCAGCGGGGAAACATGGA...TCCCAGCCCTCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp AGCTGCTGGAGAGTCCAAGATAGTGCAGGCTTCACTTCTCGTGAATCAGGAAAGCCATCCAGGTCTGGCTaGTGGAGGTCCAACTCGAAG +
Preference number: 4 (lower is better)
Translates to: SCWRVQDSAGFTSRESGKPSRSG*WRSNSK
Trigger: CTTCGAGTTGGACCTCCAGCAGCCAGACCTGGATGG...CTTTCCTGATTCACGAGAAGTGAAGCCTGCACTATCTTGGACTCTCCAGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp GTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGAAGGGTCACTTCTGTTTaGACTTGTGGATTCTCCACG +
Preference number: 4 (lower is better)
Translates to: VRAAGVLSTVMDLLSPEGRVTSV*TCGFST
Trigger: CGTGGAGAATCCACAAGTGCAAACAGAAGTGACCCT...TCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp AAGTGCTGGTGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGATGCTCCCGAAGTGCCTaGAGCTCCCCCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: KCWCLRSSVSRMRTGQTRCSRSA*SSPSCS
Trigger: GGAGCAGGAGGGGGAGCTGCAGGCACTTCGGGAGCA...TCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCACCAGCACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp TGTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGCCACAGAAGTGCTGGTaGCTTAGATCTTCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: CQGCWGLIHSHGFAEPRGPQKCW*LRSSVS
Trigger: AGACACTGAAGATCTAAGGCACCAGCACTTCTGTGG...CCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp TGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAGGGCTGGGAAAAGGTGGGCACCGCTaGTGGGTGAGTGGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: CLRSSVSRMRTGQTRGLGKGGHR*WVSGEC
Trigger: ACACTCCCCACTCACCCAGCAGCGGTGCCCACCTTT...TCCCAGCCCTCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp AGCTGCTGGAGAGTCCAAGATAGTGCAGGCTTCACTTCTCGTGAATCAGGAAAGAGCGGTCCACCTGAGTaGTGGTCACCAGTGCCGAAT +
Preference number: 4 (lower is better)
Translates to: SCWRVQDSAGFTSRESGKSGPPE*WSPVPN
Trigger: ATTCGGCACTGGTGACCAGCACTCAGGTGGACCGCT...CTTTCCTGATTCACGAGAAGTGAAGCCTGCACTATCTTGGACTCTCCAGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR CCA 90 bp AGCCATGGAAGAGAGATGCTGGAGCCTCTGCCACAGGCGGTCCTTCTCTTGGATCTCCCTCTTCTGCCATaGGTACTTGGAAATGATGTG +
Preference number: 4 (lower is better)
Translates to: SHGREMLEPLPQAVLLLDLPLLP*VLGNDV
Trigger: CACATCATTTCCAAGTACCCATGGCAGAAGAGGGAG...ATCCAAGAGAAGGACCGCCTGTGGCAGAGGCTCCAGCATCTCTCTTCCATGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR CCA 90 bp GGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTTTAACGGACAAAGTGGATTaGCTCCATGTTTCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: GCWGLIHSHGFAEPRGTLTDKVD*LHVSPL
Trigger: CAGCGGGGAAACATGGAGCCAATCCACTTTGTCCGT...TAAAGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp GGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTTTATCCAGGATGTCTTCTTaGCGTTCTGGGCAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: GCWGLIHSHGFAEPRGTLSRMSS*RSGQSR
Trigger: TCTGCTCTGCCCAGAACGCCAAGAAGACATCCTGGA...TAAAGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp AGTCATGGATTTGCTGAGCCCAGAGGGACTTTAGAGAGGATGGGGCCCAACTCTTCCAGGATGTCTTCTTaGCGTTCTGGGCAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: SHGFAEPRGTLERMGPNSSRMSS*RSGQSR
Trigger: TCTGCTCTGCCCAGAACGCCAAGAAGACATCCTGGA...AGAGTTGGGCCCCATCCTCTCTAAAGTCCCTCTGGGCTCAGCAAATCCATGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp CAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTTGTGAGTCCTCAATCTaGACATTTTCAGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: QGCWGLIHSHGFAEPRGTCESSI*TFSGPP
Trigger: TGGAGGGCCTGAAAATGTCCAGATTGAGGACTCACA...AGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp CCAGCTGCTGTCCACTGGGTGCATCTTGCAGACAGATGGCTTGACTGGTGTGTGTGTGAGTCCTCAATCTaGACATTTTCAGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: PAAVHWVHLADRWLDWCVCESSI*TFSGPP
Trigger: TGGAGGGCCTGAAAATGTCCAGATTGAGGACTCACA...CACACACCAGTCAAGCCATCTGTCTGCAAGATGCACCCAGTGGACAGCAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR CCA 90 bp CAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTGACAGATGGCTTGACTaGTGTGTGAGTCCTCAATCT +
Preference number: 4 (lower is better)
Translates to: QGCWGLIHSHGFAEPRGTDRWLD*CVSPQS
Trigger: AGATTGAGGACTCACACACCAGTCAAGCCATCTGTC...AGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp AGCTGCTGGAGAGTCCAAGATAGTGCAGGCTTCACTTCTCGTGAATCAGGAAAGTTTGTTGCTGGGACCTaGGAAGCCCTGCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SCWRVQDSAGFTSRESGKFVAGT*EALPAA
Trigger: AGCAGCTGGCAGGGCTTCCCAGGTCCCAGCAACAAA...CTTTCCTGATTCACGAGAAGTGAAGCCTGCACTATCTTGGACTCTCCAGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp AGCTGCTGGAGAGTCCAAGATAGTGCAGGCTTCACTTCTCGTGAATCAGGAAAGCCTCCAAGCTCCTCCTaGTACATGGCATCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SCWRVQDSAGFTSRESGKPPSSS*YMASLL
Trigger: GAGGAGGGATGCCATGTACCAGGAGGAGCTTGGAGG...CTTTCCTGATTCACGAGAAGTGAAGCCTGCACTATCTTGGACTCTCCAGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp ACTTCTGTTTGCACTTGTGGATTCTCCACGGTAGAGTCTTCCTTTGTTGCGTGTCGCCTCTTCATGGCCTaGACCAAGTCCCGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: TSVCTCGFSTVESSFVACRLFMA*TKSRCP
Trigger: AGGGCAGCGGGACTTGGTCCAGGCCATGAAGAGGCG...ACACGCAACAAAGGAAGACTCTACCGTGGAGAATCCACAAGTGCAAACAGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR CCA 90 bp AGCTGCTGGAGAGTCCAAGATAGTGCAGGCTTCACTTCTCGTGAATCAGGAAAGAGCACTCGGGAGCCATaGAAGAGAGATGCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: SCWRVQDSAGFTSRESGKSTREP*KRDAGA
Trigger: GGCTCCAGCATCTCTCTTCCATGGCTCCCGAGTGCT...CTTTCCTGATTCACGAGAAGTGAAGCCTGCACTATCTTGGACTCTCCAGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp GGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTTTATCCACAGAGCCTGCATaGATACCGCCGAGAAAATCG +
Preference number: 4 (lower is better)
Translates to: GCWGLIHSHGFAEPRGTLSTEPA*IPPRKS
Trigger: CGATTTTCTCGGCGGTATCCATGCAGGCTCTGTGGA...TAAAGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344321.8
ENST00000457754.6
CDS-3UTR CCA 90 bp TGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAGGGCTGGGAGCTACGGGCAGGGAGTaGATTGAGTGGGATGGGCAG +
Preference number: 4 (lower is better)
Translates to: CLRSSVSRMRTGQTRGLGATGRE*IEWDGQ
Trigger: CTGCCCATCCCACTCAATCCACTCCCTGCCCGTAGC...TCCCAGCCCTCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp AAGTGCTGGTGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAAGAGGCAGGAAAGCCTaGGGCGGCCTCTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: KCWCLRSSVSRMRTGQTRRGRKA*GGLCSW
Trigger: CCAGCTGCAGAGGCCGCCCCAGGCTTTCCTGCCTCT...TCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCACCAGCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374155.7
CDS-3UTR CCA 90 bp CCCTTCTGGCTCCCACATGCTCTGGGGGTACCTATGTTTCCTGGAACTTTCCCCCCAGGATTTACAGCCTaGGAAGAAGTAACTCAGTCC +
Preference number: 4 (lower is better)
Translates to: PFWLPHALGVPMFPGTFPPGFTA*EEVTQS
Trigger: GGACTGAGTTACTTCTTCCCAGGCTGTAAATCCTGG...GGGGAAAGTTCCAGGAAACATAGGTACCCCCAGAGCATGTGGGAGCCAGAAGGG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR TCA 90 bp AGTCATGGATTTGCTGAGCCCAGAGGGACTTTAGAGAGGATGGGGCCCAACTCTTTGCAACTTGGACTGTaGGCTCAGGAAGGACTTTCG +
Preference number: 4 (lower is better)
Translates to: SHGFAEPRGTLERMGPNSLQLGL*AQEGLS
Trigger: CGAAAGTCCTTCCTGAGCTCACAGTCCAAGTTGCAA...AGAGTTGGGCCCCATCCTCTCTAAAGTCCCTCTGGGCTCAGCAAATCCATGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR TCA 90 bp GGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTTTAGGCTTGACTGGTGTGTaGGTCCTCAATCTGGACATT +
Preference number: 4 (lower is better)
Translates to: GCWGLIHSHGFAEPRGTLGLTGV*VLNLDI
Trigger: AATGTCCAGATTGAGGACTCACACACCAGTCAAGCC...TAAAGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR TCA 90 bp TGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAGGGCTGGGACTGGGTGCTGGGTGTTaGGTTCCCCAGGAAGATCTC +
Preference number: 4 (lower is better)
Translates to: CLRSSVSRMRTGQTRGLGLGAGC*VPQEDL
Trigger: GAGATCTTCCTGGGGAACTCAACACCCAGCACCCAG...TCCCAGCCCTCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR TCA 90 bp TGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAGGGCTGGGACCTATCACCTCCTTCTaGGTGCCCATAGCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: CLRSSVSRMRTGQTRGLGPITSF*VPIAPF
Trigger: GAAGGGGGCTATGGGCACTCAGAAGGAGGTGATAGG...TCCCAGCCCTCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR TCA 90 bp AAGTGCTGGTGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGATTTGTTGCGTGTCCCTaGAGGACCCAGGGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: KCWCLRSSVSRMRTGQTRFVACP*RTQGSP
Trigger: GGGGGAGCCCTGGGTCCTTCAGGGACACGCAACAAA...TCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCACCAGCACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR TCA 90 bp TGTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGCTTCAGTGTCTAGAATaGGGACTGGACAAACAAGAG +
Preference number: 4 (lower is better)
Translates to: CQGCWGLIHSHGFAEPRGLQCLE*GLDKQE
Trigger: CTCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAG...CCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR TCA 90 bp AAATGTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGATTAGAGAAGAAGCCCTaGGCACTGAGAGCTTCGCCA +
Preference number: 4 (lower is better)
Translates to: KCQGCWGLIHSHGFAEPRLEKKP*ALRASP
Trigger: TGGCGAAGCTCTCAGTGCTCAGGGCTTCTTCTCTAA...TCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGACATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp TGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAGGGCTGGGACCATCCAGGTCTGGCTaGTGGAGGTCCAACTCGAAG +
Preference number: 4 (lower is better)
Translates to: CLRSSVSRMRTGQTRGLGPSRSG*WRSNSK
Trigger: CTTCGAGTTGGACCTCCAGCAGCCAGACCTGGATGG...TCCCAGCCCTCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp TGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAGGGCTGGGACTCTTGATCTCGTCCTaGAGGGACACCTCGGCTTGC +
Preference number: 4 (lower is better)
Translates to: CLRSSVSRMRTGQTRGLGLLISS*RDTSAC
Trigger: GCAAGCCGAGGTGTCCCTGCAGGACGAGATCAAGAG...TCCCAGCCCTCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp AAGTGCTGGTGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGATGGACCAAGTCCCGCTaGCCTCCAAGCTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: KCWCLRSSVSRMRTGQTRWTKSR*PPSSSW
Trigger: CCAGGAGGAGCTTGGAGGGCAGCGGGACTTGGTCCA...TCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCACCAGCACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp AGCAGCGGTCTCTCTTCTTGTAATCCATGGAGCAAGCATGGCAGAGCAGGCCTCCCACAGAAGTGCTGGTaGCTTAGATCTTCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: SSGLSSCNPWSKHGRAGLPQKCW*LRSSVS
Trigger: AGACACTGAAGATCTAAGGCACCAGCACTTCTGTGG...GAGGCCTGCTCTGCCATGCTTGCTCCATGGATTACAAGAAGAGAGACCGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp GGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTTTACATCTCCCAGTGGAATaGCCTTGGTTTGTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: GCWGLIHSHGFAEPRGTLHLPVE*PWFVSG
Trigger: TCCTGAGACAAACCAAGGGCATTCCACTGGGAGATG...TAAAGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374155.7
CDS-3UTR CCA 90 bp AAGTGCTGGTGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGATGTGCAGCTCGGCACTaGTGTCCGTCACTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: KCWCLRSSVSRMRTGQTRCAARH*CPSLAP
Trigger: AGGGGCCAGTGACGGACACCAGTGCCGAGCTGCACA...TCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCACCAGCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp GGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTTTACTCTTCTGCTCTTTCTaGTCAAACTGCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GCWGLIHSHGFAEPRGTLLFCSF*SNCSSS
Trigger: GCTGCTGCTGCAGTTTGACCAGAAAGAGCAGAAGAG...TAAAGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp AAATGTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAACGGACAAAGTGGATTaGCTCCATGTTTCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: KCQGCWGLIHSHGFAEPRTDKVD*LHVSPL
Trigger: CAGCGGGGAAACATGGAGCCAATCCACTTTGTCCGT...TCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGACATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp GTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGAGTCTTCAACTTGTCCTaGGAACGGACAAAGTGGATT +
Preference number: 4 (lower is better)
Translates to: VRAAGVLSTVMDLLSPEGVFNLS*ERTKWI
Trigger: AATCCACTTTGTCCGTTCCCAGGACAAGTTGAAGAC...TCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344321.8
ENST00000374155.7
CDS-3UTR CCA 90 bp TGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAGGGCTGGGACTGGGTCTCCTTCCCTaGGTTTGGGTGGAACTGGAG +
Preference number: 4 (lower is better)
Translates to: CLRSSVSRMRTGQTRGLGLGLLP*VWVELE
Trigger: CTCCAGTTCCACCCAAACCCAGGGAAGGAGACCCAG...TCCCAGCCCTCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp TGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAGGGCTGGGACCTCCAAGCTCCTCCTaGTACATGGCATCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: CLRSSVSRMRTGQTRGLGPPSSS*YMASLL
Trigger: GAGGAGGGATGCCATGTACCAGGAGGAGCTTGGAGG...TCCCAGCCCTCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp AGCTGCTGGAGAGTCCAAGATAGTGCAGGCTTCACTTCTCGTGAATCAGGAAAGTGGGCGCTGAGGTCATaGAGTTCCAGCATCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SCWRVQDSAGFTSRESGKWALRS*SSSIFR
Trigger: CCTGAAGATGCTGGAACTCCATGACCTCAGCGCCCA...CTTTCCTGATTCACGAGAAGTGAAGCCTGCACTATCTTGGACTCTCCAGCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374155.7
CDS-3UTR GCA 90 bp TGTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGAATGATGTGATTCCTTaGAACTTGGACTGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: CQGCWGLIHSHGFAEPRGNDVIP*NLDCEL
Trigger: GAGCTCACAGTCCAAGTTGCAAGGAATCACATCATT...CCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp AAATGTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGATGGCTCCCTCTTCTaGCATGGGTACTTGGAAATG +
Preference number: 4 (lower is better)
Translates to: KCQGCWGLIHSHGFAEPRDGSLF*HGYLEM
Trigger: CATTTCCAAGTACCCATGGCAGAAGAGGGAGCCATC...TCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGACATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp TGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAGGGCTGGGAGGAAGATGCCTTTGTTaGTGGGACCTGGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: CLRSSVSRMRTGQTRGLGGRCLC*WDLGSP
Trigger: AGGGCTTCCCAGGTCCCAGCAACAAAGGCATCTTCC...TCCCAGCCCTCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp CAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTAAAAAGAAAGGAAGATaGCTTTGTTGCTGGGACCTG +
Preference number: 4 (lower is better)
Translates to: QGCWGLIHSHGFAEPRGTKKKGR*LCCWDL
Trigger: CAGGTCCCAGCAACAAAGGCATCTTCCTTTCTTTTT...AGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp CCCTTCTGGCTCCCACATGCTCTGGGGGTACCTATGTTTCCTGGAACTTTCCCCAAAAAGAAAGGAAGATaGCTTTGTTGCTGGGACCTG +
Preference number: 4 (lower is better)
Translates to: PFWLPHALGVPMFPGTFPKKKGR*LCCWDL
Trigger: CAGGTCCCAGCAACAAAGGCATCTTCCTTTCTTTTT...GGGGAAAGTTCCAGGAAACATAGGTACCCCCAGAGCATGTGGGAGCCAGAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR GCA 90 bp AAATGTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAATCGGCCAAAGATCTTaGTACAGGCCACACAGCACT +
Preference number: 4 (lower is better)
Translates to: KCQGCWGLIHSHGFAEPRIGQRS*YRPHST
Trigger: AGTGCTGTGTGGCCTGTAGCAAGATCTTTGGCCGAT...TCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGACATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp AAGTGCTGGTGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGACCCCACACCCTACTCTaGCCACAGAAGTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: KCWCLRSSVSRMRTGQTRPHTLL*PQKCWC
Trigger: GCACCAGCACTTCTGTGGGCAGAGTAGGGTGTGGGG...TCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCACCAGCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp AAGTGCTGGTGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAAAAGGTGGGCACCGCTaGTGGGTGAGTGGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: KCWCLRSSVSRMRTGQTRKGGHR*WVSGEC
Trigger: ACACTCCCCACTCACCCAGCAGCGGTGCCCACCTTT...TCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCACCAGCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp GGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTTTACTCCCTCTTCTGCCATaGGTACTTGGAAATGATGTG +
Preference number: 4 (lower is better)
Translates to: GCWGLIHSHGFAEPRGTLLPLLP*VLGNDV
Trigger: CACATCATTTCCAAGTACCCATGGCAGAAGAGGGAG...TAAAGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp AAGTGCTGGTGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAACTGGTGTCCGTCACTaGCCCCTGCCCATCCCCATA +
Preference number: 4 (lower is better)
Translates to: KCWCLRSSVSRMRTGQTRTGVRH*PLPIPI
Trigger: TATGGGGATGGGCAGGGGCCAGTGACGGACACCAGT...TCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCACCAGCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp TGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAGGGCTGGGAGGGTTTGGGTGGAACTaGAGCAGCGTGACTCTGAGA +
Preference number: 4 (lower is better)
Translates to: CLRSSVSRMRTGQTRGLGGFGWN*SSVTLR
Trigger: TCTCAGAGTCACGCTGCTCCAGTTCCACCCAAACCC...TCCCAGCCCTCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp TGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAGGGCTGGGATTCCCTGGGTTTGGGTaGAACTGGAGCAGCGTGACT +
Preference number: 4 (lower is better)
Translates to: CLRSSVSRMRTGQTRGLGFPGFG*NWSSVT
Trigger: AGTCACGCTGCTCCAGTTCCACCCAAACCCAGGGAA...TCCCAGCCCTCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp AGTCATGGATTTGCTGAGCCCAGAGGGACTTTAGAGAGGATGGGGCCCAACTCTGACAGATGGCTTGACTaGTGTGTGAGTCCTCAATCT +
Preference number: 4 (lower is better)
Translates to: SHGFAEPRGTLERMGPNSDRWLD*CVSPQS
Trigger: AGATTGAGGACTCACACACCAGTCAAGCCATCTGTC...AGAGTTGGGCCCCATCCTCTCTAAAGTCCCTCTGGGCTCAGCAAATCCATGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp AGTCATGGATTTGCTGAGCCCAGAGGGACTTTAGAGAGGATGGGGCCCAACTCTCATCTTGCAGACAGATaGCTTGACTGGTGTGTGAGT +
Preference number: 4 (lower is better)
Translates to: SHGFAEPRGTLERMGPNSHLADR*LDWCVS
Trigger: ACTCACACACCAGTCAAGCCATCTGTCTGCAAGATG...AGAGTTGGGCCCCATCCTCTCTAAAGTCCCTCTGGGCTCAGCAAATCCATGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp TGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAGGGCTGGGAGGCTCCCACATGCTCTaGGGGTACCTATGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: CLRSSVSRMRTGQTRGLGGSHML*GYLCFL
Trigger: CAGGAAACATAGGTACCCCCAGAGCATGTGGGAGCC...TCCCAGCCCTCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp AGCAGCGGTCTCTCTTCTTGTAATCCATGGAGCAAGCATGGCAGAGCAGGCCTCTTCTGTTTGCACTTGTaGATTCTCCACGGTAGAGTC +
Preference number: 4 (lower is better)
Translates to: SSGLSSCNPWSKHGRAGLFCLHL*ILHGRV
Trigger: GACTCTACCGTGGAGAATCCACAAGTGCAAACAGAA...GAGGCCTGCTCTGCCATGCTTGCTCCATGGATTACAAGAAGAGAGACCGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp TGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAGGGCTGGGAAGGCGGTCCTTCTCTTaGATCAGTTCCAACACCCGC +
Preference number: 4 (lower is better)
Translates to: CLRSSVSRMRTGQTRGLGRRSFS*ISSNTR
Trigger: GCGGGTGTTGGAACTGATCCAAGAGAAGGACCGCCT...TCCCAGCCCTCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp TGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAGGGCTGGGAGTCATGGGCTGGTCTTaGTCTTGGTCAGGTGACCTG +
Preference number: 4 (lower is better)
Translates to: CLRSSVSRMRTGQTRGLGVMGWS*SWSGDL
Trigger: CAGGTCACCTGACCAAGACCAAGACCAGCCCATGAC...TCCCAGCCCTCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp AGTCATGGATTTGCTGAGCCCAGAGGGACTTTAGAGAGGATGGGGCCCAACTCTAAATGTCAGGGCTGCTaGGGTCTTATCCACAGTCAT +
Preference number: 4 (lower is better)
Translates to: SHGFAEPRGTLERMGPNSKCQGC*GLIHSH
Trigger: ATGACTGTGGATAAGACCCCAGCAGCCCTGACATTT...AGAGTTGGGCCCCATCCTCTCTAAAGTCCCTCTGGGCTCAGCAAATCCATGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
3UTR CAA 72 bp TTGCTCCTCCCTTCTGGCCACAAGGGTCACTTCTGTTaGCACTTGTGGATTCTCCACGGTAGAGTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: LLLPSGHKGHFC*HLWILHGRVFL
Trigger: AAGGAAGACTCTACCGTGGAGAATCCACAAGTGCAAACAGAAGTGACCCTTGTGGCCAGAAGGGAGGAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR TCA 90 bp CAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTATGGGTACTTGGAAATaGTGTGATTCCTTGCAACTT +
Preference number: 4 (lower is better)
Translates to: QGCWGLIHSHGFAEPRGTMGTWK*CDSLQL
Trigger: AAGTTGCAAGGAATCACATCATTTCCAAGTACCCAT...AGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR TCA 90 bp GGGTGGGCAGCAGCGGTCTCTCTTCTTGTAATCCATGGAGCAAGCATGGCAGAGATGGGTACTTGGAAATaGTGTGATTCCTTGCAACTT +
Preference number: 4 (lower is better)
Translates to: GWAAAVSLLVIHGASMAEMGTWK*CDSLQL
Trigger: AAGTTGCAAGGAATCACATCATTTCCAAGTACCCAT...CTCTGCCATGCTTGCTCCATGGATTACAAGAAGAGAGACCGCTGCTGCCCACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR TCA 90 bp AAGTGCTGGTGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGACTGGGTGCTGGGTGTTaGGTTCCCCAGGAAGATCTC +
Preference number: 4 (lower is better)
Translates to: KCWCLRSSVSRMRTGQTRLGAGC*VPQEDL
Trigger: GAGATCTTCCTGGGGAACTCAACACCCAGCACCCAG...TCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCACCAGCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR TCA 90 bp TGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAGGGCTGGGAAGGGGCTTCCTGAGCTaGAGCAGAATGAAACTGCTG +
Preference number: 4 (lower is better)
Translates to: CLRSSVSRMRTGQTRGLGRGFLS*SRMKLL
Trigger: CAGCAGTTTCATTCTGCTTCAGCTCAGGAAGCCCCT...TCCCAGCCCTCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR GCA 90 bp TGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAGGGCTGGGATCTTTCTGGTCAAACTaGAGCAGCAGCTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: CLRSSVSRMRTGQTRGLGSFWSN*SSSSRQ
Trigger: CTGCCTGGAGCTGCTGCTGCAGTTTGACCAGAAAGA...TCCCAGCCCTCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp AGCTGCTGGAGAGTCCAAGATAGTGCAGGCTTCACTTCTCGTGAATCAGGAAAGCCCAGGAAGCTCTTCTaGTCTTTCTGGTCAAACTGC +
Preference number: 4 (lower is better)
Translates to: SCWRVQDSAGFTSRESGKPRKLF*SFWSNC
Trigger: GCAGTTTGACCAGAAAGAGCAGAAGAGCTTCCTGGG...CTTTCCTGATTCACGAGAAGTGAAGCCTGCACTATCTTGGACTCTCCAGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp TGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAGGGCTGGGACTTCTGGCTCCCACATaGTCTGGGGGTACCTATGTT +
Preference number: 4 (lower is better)
Translates to: CLRSSVSRMRTGQTRGLGLLAPT*SGGTYV
Trigger: AACATAGGTACCCCCAGAGCATGTGGGAGCCAGAAG...TCCCAGCCCTCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp AGCTGCTGGAGAGTCCAAGATAGTGCAGGCTTCACTTCTCGTGAATCAGGAAAGAGAGTCTTCCTTTGTTaGGTGTCCCTGAAGGACCCA +
Preference number: 4 (lower is better)
Translates to: SCWRVQDSAGFTSRESGKRVFLC*VSLKDP
Trigger: TGGGTCCTTCAGGGACACGCAACAAAGGAAGACTCT...CTTTCCTGATTCACGAGAAGTGAAGCCTGCACTATCTTGGACTCTCCAGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp AAGTGCTGGTGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAGCCATGGAAGAGAGATaGTGGAGCCTCTGCCACAGG +
Preference number: 4 (lower is better)
Translates to: KCWCLRSSVSRMRTGQTRAMEER*WSLCHR
Trigger: CCTGTGGCAGAGGCTCCAGCATCTCTCTTCCATGGC...TCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCACCAGCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp AGCTGCTGGAGAGTCCAAGATAGTGCAGGCTTCACTTCTCGTGAATCAGGAAAGGAGAAATGTCAGGGCTaGTGGGGTCTTATCCACAGT +
Preference number: 4 (lower is better)
Translates to: SCWRVQDSAGFTSRESGKEKCQG*WGLIHS
Trigger: ACTGTGGATAAGACCCCAGCAGCCCTGACATTTCTC...CTTTCCTGATTCACGAGAAGTGAAGCCTGCACTATCTTGGACTCTCCAGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp AAGTGCTGGTGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAAGATGCCTTTGTTGCTaGGACCTGGGAAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: KCWCLRSSVSRMRTGQTRRCLCC*DLGSPA
Trigger: GGCAGGGCTTCCCAGGTCCCAGCAACAAAGGCATCT...TCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCACCAGCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR TCA 90 bp TGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAGGGCTGGGATTGCAACTTGGACTGTaGGCTCAGGAAGGACTTTCG +
Preference number: 4 (lower is better)
Translates to: CLRSSVSRMRTGQTRGLGLQLGL*AQEGLS
Trigger: CGAAAGTCCTTCCTGAGCTCACAGTCCAAGTTGCAA...TCCCAGCCCTCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR TCA 90 bp AGCAGCGGTCTCTCTTCTTGTAATCCATGGAGCAAGCATGGCAGAGCAGGCCTCTACTTGGAAATGATGTaGTTCCTTGCAACTTGGACT +
Preference number: 4 (lower is better)
Translates to: SSGLSSCNPWSKHGRAGLYLEMM*FLATWT
Trigger: AGTCCAAGTTGCAAGGAATCACATCATTTCCAAGTA...GAGGCCTGCTCTGCCATGCTTGCTCCATGGATTACAAGAAGAGAGACCGCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR TCA 90 bp AAGTGCTGGTGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAAGCAGCCTCTGGACGTaGCTCCACTCTGCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: KCWCLRSSVSRMRTGQTRSSLWT*LHSASF
Trigger: AAAGGAAGCAGAGTGGAGTCACGTCCAGAGGCTGCT...TCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCACCAGCACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR TCA 90 bp TGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAGGGCTGGGACAGTCATGGATTTGCTaGGCCCAGAGGGACTTTAGA +
Preference number: 4 (lower is better)
Translates to: CLRSSVSRMRTGQTRGLGQSWIC*AQRDFR
Trigger: TCTAAAGTCCCTCTGGGCTCAGCAAATCCATGACTG...TCCCAGCCCTCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp AAGTGCTGGTGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGACTGCTGTCCACTGGGTaGATCTTGCAGACAGATGGC +
Preference number: 4 (lower is better)
Translates to: KCWCLRSSVSRMRTGQTRLLSTG*ILQTDG
Trigger: GCCATCTGTCTGCAAGATGCACCCAGTGGACAGCAG...TCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCACCAGCACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp TGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAGGGCTGGGAAGAGTCTTCCTTTGTTaGGTGTCCCTGAAGGACCCA +
Preference number: 4 (lower is better)
Translates to: CLRSSVSRMRTGQTRGLGRVFLC*VSLKDP
Trigger: TGGGTCCTTCAGGGACACGCAACAAAGGAAGACTCT...TCCCAGCCCTCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp TGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAGGGCTGGGACTCTGCCCACAGAAGTaGTGGTGCCTTAGATCTTCA +
Preference number: 4 (lower is better)
Translates to: CLRSSVSRMRTGQTRGLGLCPQK*WCLRSS
Trigger: TGAAGATCTAAGGCACCAGCACTTCTGTGGGCAGAG...TCCCAGCCCTCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp TGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAGGGCTGGGAGAGAAATGTCAGGGCTaGTGGGGTCTTATCCACAGT +
Preference number: 4 (lower is better)
Translates to: CLRSSVSRMRTGQTRGLGEKCQG*WGLIHS
Trigger: ACTGTGGATAAGACCCCAGCAGCCCTGACATTTCTC...TCCCAGCCCTCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp AAATGTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGTCTTCAACTTGTCCTaGGAACGGACAAAGTGGATT +
Preference number: 4 (lower is better)
Translates to: KCQGCWGLIHSHGFAEPRVFNLS*ERTKWI
Trigger: AATCCACTTTGTCCGTTCCCAGGACAAGTTGAAGAC...TCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGACATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344321.8
ENST00000374155.7
CDS-3UTR CCA 90 bp AAGTGCTGGTGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGACTTGCTCCTCCCTTCTaGCCACAAGGGTCACTTCTG +
Preference number: 4 (lower is better)
Translates to: KCWCLRSSVSRMRTGQTRLAPPF*PQGSLL
Trigger: CAGAAGTGACCCTTGTGGCCAGAAGGGAGGAGCAAG...TCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCACCAGCACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp TGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAGGGCTGGGATGCCCACAGAAGTGCTaGTGCCTTAGATCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: CLRSSVSRMRTGQTRGLGCPQKC*CLRSSV
Trigger: CACTGAAGATCTAAGGCACCAGCACTTCTGTGGGCA...TCCCAGCCCTCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR TCA 90 bp GGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTTTATACTTGGAAATGATGTaGTTCCTTGCAACTTGGACT +
Preference number: 4 (lower is better)
Translates to: GCWGLIHSHGFAEPRGTLYLEMM*FLATWT
Trigger: AGTCCAAGTTGCAAGGAATCACATCATTTCCAAGTA...TAAAGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR TCA 90 bp GGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTTTAATGGGTACTTGGAAATaGTGTGATTCCTTGCAACTT +
Preference number: 4 (lower is better)
Translates to: GCWGLIHSHGFAEPRGTLMGTWK*CDSLQL
Trigger: AAGTTGCAAGGAATCACATCATTTCCAAGTACCCAT...TAAAGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp AAGTGCTGGTGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGATCTTTCTGGTCAAACTaGAGCAGCAGCTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: KCWCLRSSVSRMRTGQTRSFWSN*SSSSRQ
Trigger: CTGCCTGGAGCTGCTGCTGCAGTTTGACCAGAAAGA...TCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCACCAGCACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp AAGTGCTGGTGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAGCCGTCGTAGGGCAGTaGAGAGAAAGTCCCAGTAAT +
Preference number: 4 (lower is better)
Translates to: KCWCLRSSVSRMRTGQTRAVVGQ*RESPSN
Trigger: ATTACTGGGACTTTCTCTGCACTGCCCTACGACGGC...TCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCACCAGCACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp AAGTGCTGGTGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGATGTTCTCTGACCCTCTaGAACCAGCAGAACCCCTGT +
Preference number: 4 (lower is better)
Translates to: KCWCLRSSVSRMRTGQTRCSLTL*NQQNPC
Trigger: ACAGGGGTTCTGCTGGTTGCAGAGGGTCAGAGAACA...TCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCACCAGCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp ACTTCTGTTTGCACTTGTGGATTCTCCACGGTAGAGTCTTCCTTTGTTGCGTGTCTCTTCTGCTCTTTCTaGTCAAACTGCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TSVCTCGFSTVESSFVACLFCSF*SNCSSS
Trigger: GCTGCTGCTGCAGTTTGACCAGAAAGAGCAGAAGAG...ACACGCAACAAAGGAAGACTCTACCGTGGAGAATCCACAAGTGCAAACAGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR CCA 90 bp TGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAGGGCTGGGACATCTTGCAGACAGATaGCTTGACTGGTGTGTGAGT +
Preference number: 4 (lower is better)
Translates to: CLRSSVSRMRTGQTRGLGHLADR*LDWCVS
Trigger: ACTCACACACCAGTCAAGCCATCTGTCTGCAAGATG...TCCCAGCCCTCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR TCA 90 bp TGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAGGGCTGGGACTTCAGTGTCTAGAATaGGGACTGGACAAACAAGAG +
Preference number: 4 (lower is better)
Translates to: CLRSSVSRMRTGQTRGLGLQCLE*GLDKQE
Trigger: CTCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAG...TCCCAGCCCTCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp AGCTGCTGGAGAGTCCAAGATAGTGCAGGCTTCACTTCTCGTGAATCAGGAAAGAATGATGTGATTCCTTaGAACTTGGACTGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: SCWRVQDSAGFTSRESGKNDVIP*NLDCEL
Trigger: GAGCTCACAGTCCAAGTTGCAAGGAATCACATCATT...CTTTCCTGATTCACGAGAAGTGAAGCCTGCACTATCTTGGACTCTCCAGCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp AAGTGCTGGTGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGACTAGTGACTCTGCCTTaGACAGCAGTCCCAGGATTT +
Preference number: 4 (lower is better)
Translates to: KCWCLRSSVSRMRTGQTRLVTLP*TAVPGF
Trigger: AAATCCTGGGACTGCTGTGCAAGGCAGAGTCACTAG...TCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCACCAGCACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp AAGTGCTGGTGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGACTCTTCTGCTCTTTCTaGTCAAACTGCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KCWCLRSSVSRMRTGQTRLFCSF*SNCSSS
Trigger: GCTGCTGCTGCAGTTTGACCAGAAAGAGCAGAAGAG...TCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCACCAGCACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp AAGTGCTGGTGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAGAAGATCTCAATCCATaGGGCTCTTTCCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: KCWCLRSSVSRMRTGQTREDLNP*GSFLLV
Trigger: GACCAGGAGGAAAGAGCCCCATGGATTGAGATCTTC...TCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCACCAGCACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp AAGTGCTGGTGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGATGTGAGTCCTCAATCTaGACATTTTCAGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: KCWCLRSSVSRMRTGQTRCESSI*TFSGPP
Trigger: TGGAGGGCCTGAAAATGTCCAGATTGAGGACTCACA...TCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCACCAGCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp AAGTGCTGGTGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGATTCTGTTTGCACTTGTaGATTCTCCACGGTAGAGTC +
Preference number: 4 (lower is better)
Translates to: KCWCLRSSVSRMRTGQTRFCLHL*ILHGRV
Trigger: GACTCTACCGTGGAGAATCCACAAGTGCAAACAGAA...TCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCACCAGCACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CCA 90 bp AAGTGCTGGTGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGATCTTCTTGTAATCCATaGAGCAAGCATGGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: KCWCLRSSVSRMRTGQTRSSCNP*SKHGRA
Trigger: TGCTCTGCCATGCTTGCTCCATGGATTACAAGAAGA...TCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCACCAGCACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR GCA 90 bp AAGTGCTGGTGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAAAAAAGAAAGGAAGATaGCTTTGTTGCTGGGACCTG +
Preference number: 4 (lower is better)
Translates to: KCWCLRSSVSRMRTGQTRKKKGR*LCCWDL
Trigger: CAGGTCCCAGCAACAAAGGCATCTTCCTTTCTTTTT...TCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCACCAGCACTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS TCA 90 bp GCTGCAGGGCCTCAGCCAGCTGCCCACGGGCCAGGCAGAAGCGGATaGAGGCACGGCCTTTCCCCAGAGGGGTCTTCAACTTGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: AAGPQPAAHGPGRSG*RHGLSPEGSSTCPG
Trigger: CCCAGGACAAGTTGAAGACCCCTCTGGGGAAAGGCCGTGCCTTCATCCGCTTCTGCCTGGCCCGTGGGCAGCTGGCTGAGGCCCTGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344321.8
ENST00000374155.7
CDS GCA 90 bp GGTCCATACCATTCCCTGGTGAGCTCTGAGTTCAGGAGGCAAAGCTaGAGGGCCTCAGCCAGCTGCCCACGGGCCAGGCAGAAGCGGATG +
Preference number: 5 (lower is better)
Translates to: GPYHSLVSSEFRRQS*RASASCPRARQKRM
Trigger: CATCCGCTTCTGCCTGGCCCGTGGGCAGCTGGCTGAGGCCCTGCAGCTTTGCCTCCTGAACTCAGAGCTCACCAGGGAATGGTATGGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344321.8
ENST00000374155.7
CDS CCA 90 bp GGAAGAAGTAACTCAGTCCCAGCCCAGCAGCCTGGAGGGGGAACCTaGCTCACAGCGGTGGGGGAACCGCAGACGCTGCAGGGAAGAAGT +
Preference number: 5 (lower is better)
Translates to: GRSNSVPAQQPGGGT*LTAVGEPQTLQGRS
Trigger: ACTTCTTCCCTGCAGCGTCTGCGGTTCCCCCACCGCTGTGAGCCAGGTTCCCCCTCCAGGCTGCTGGGCTGGGACTGAGTTACTTCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000457754.6
ENST00000465568.5
ENST00000480164.5
CDS CCA 90 bp GGAAGAAGTAACTCAGTCCCAGCCCAGCAGCCTGGAGGGGGAACCTaGCTCACAGCGGTGGGGGAACCGCAGACGCTTCCTGAGCTGAAG +
Preference number: 5 (lower is better)
Translates to: GRSNSVPAQQPGGGT*LTAVGEPQTLPELK
Trigger: CTTCAGCTCAGGAAGCGTCTGCGGTTCCCCCACCGCTGTGAGCCAGGTTCCCCCTCCAGGCTGCTGGGCTGGGACTGAGTTACTTCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000463618.6
CDS-3UTR CAA 90 bp CTTCTCGTGAATCAGGAAAGGTGGGCACCGCTGCTGGGTGAGTGGGGAGTGTGGTCTCCTTCCCTGGGTTaGGGTGGAACTGGAGCAGCG +
Preference number: 5 (lower is better)
Translates to: LLVNQERWAPLLGEWGVWSPSLG*GGTGAA
Trigger: CGCTGCTCCAGTTCCACCCAAACCCAGGGAAGGAGA...CCACACTCCCCACTCACCCAGCAGCGGTGCCCACCTTTCCTGATTCACGAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CAA 90 bp CAGGTGGGAGGCCAGTCATGGGCTGGTCTTGGTCTTGGTCAGGTGACCTGGGCTCCAAGTCTGAGGCTCTaGATCTCGTCCTGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: QVGGQSWAGLGLGQVTWAPSLRL*ISSCRD
Trigger: GTCCCTGCAGGACGAGATCAAGAGCCTCAGACTTGG...AGCCCAGGTCACCTGACCAAGACCAAGACCAGCCCATGACTGGCCTCCCACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CAA 90 bp CCGCCTCTTCATGGCCTGGACCAAGTCCCGCTGCCCTCCAAGCTCCTCCTGGTATCCACTGGGTGCATCTaGCAGACAGATGGCTTGACT +
Preference number: 5 (lower is better)
Translates to: PPLHGLDQVPLPSKLLLVSTGCI*QTDGLT
Trigger: AGTCAAGCCATCTGTCTGCAAGATGCACCCAGTGGA...TACCAGGAGGAGCTTGGAGGGCAGCGGGACTTGGTCCAGGCCATGAAGAGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR CAA 90 bp CAGGCAGGTGGGAGGCCAGTCATGGGCTGGTCTTGGTCTTGGTCAGGTGACCTGCCTAGTGACTCTGCCTaGCACAGCAGTCCCAGGATT +
Preference number: 5 (lower is better)
Translates to: QAGGRPVMGWSWSWSGDLPSDSA*HSSPRI
Trigger: AATCCTGGGACTGCTGTGCAAGGCAGAGTCACTAGG...CAGGTCACCTGACCAAGACCAAGACCAGCCCATGACTGGCCTCCCACCTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CAA 90 bp GTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGATCTCCTTCCCTGGGTTaGGGTGGAACTGGAGCAGCG +
Preference number: 5 (lower is better)
Translates to: VRAAGVLSTVMDLLSPEGSPSLG*GGTGAA
Trigger: CGCTGCTCCAGTTCCACCCAAACCCAGGGAAGGAGA...TCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CAA 90 bp CTTCTCGTGAATCAGGAAAGGTGGGCACCGCTGCTGGGTGAGTGGGGAGTGTGGCCCAGTGGAATGCCCTaGGTTTGTCTCAGGAGGTCT +
Preference number: 5 (lower is better)
Translates to: LLVNQERWAPLLGEWGVWPSGMP*VCLRRS
Trigger: AGACCTCCTGAGACAAACCAAGGGCATTCCACTGGG...CCACACTCCCCACTCACCCAGCAGCGGTGCCCACCTTTCCTGATTCACGAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374155.7
CDS TCA 90 bp GAACCTGGCTCACAGCGGTGGGGGAACCGCAGACGCTTCCTGAGCTaGAGCAGAATGAAACTGCTGCTCCAATTCCCGCTTCCAGATCTC +
Preference number: 5 (lower is better)
Translates to: EPGSQRWGNRRRFLS*SRMKLLLQFPLPDL
Trigger: GAGATCTGGAAGCGGGAATTGGAGCAGCAGTTTCATTCTGCTTCAGCTCAGGAAGCGTCTGCGGTTCCCCCACCGCTGTGAGCCAGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463618.6
CDS GCA 90 bp CAAAGTGGATTGGCTCCATGTTTCCCCGCTGCCGTCGTAGGGCAGTaGAGAGAAAGTCCCAGTAATCCTTCCGAGGCCCCAGGAAGCTCT +
Preference number: 5 (lower is better)
Translates to: QSGLAPCFPAAVVGQ*RESPSNPSEAPGSS
Trigger: AGAGCTTCCTGGGGCCTCGGAAGGATTACTGGGACTTTCTCTGCACTGCCCTACGACGGCAGCGGGGAAACATGGAGCCAATCCACTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
ENST00000495721.1
CDS CCA 90 bp TCCCTAGTGACTCTGCCTTGCACAGCAGTCCCAGGATTTACAGCCTaGGAAGAAGTAACTCAGTCCCAGCCCAGCAGCCTGGAGGGGGAA +
Preference number: 5 (lower is better)
Translates to: SLVTLPCTAVPGFTA*EEVTQSQPSSLEGE
Trigger: TTCCCCCTCCAGGCTGCTGGGCTGGGACTGAGTTACTTCTTCCCAGGCTGTAAATCCTGGGACTGCTGTGCAAGGCAGAGTCACTAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000457754.6
ENST00000463618.6
ENST00000465568.5
ENST00000472496.1
ENST00000480164.5
CDS-3UTR CAA 90 bp CTTCTCGTGAATCAGGAAAGGTGGGCACCGCTGCTGGGTGAGTGGGGAGTGTGGAACGGACAAAGTGGATaGGCTCCATGTTTCCCCGCT +
Preference number: 5 (lower is better)
Translates to: LLVNQERWAPLLGEWGVWNGQSG*APCFPA
Trigger: AGCGGGGAAACATGGAGCCAATCCACTTTGTCCGTT...CCACACTCCCCACTCACCCAGCAGCGGTGCCCACCTTTCCTGATTCACGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CAA 90 bp CCCTTCTGGCTCCCACATGCTCTGGGGGTACCTATGTTTCCTGGAACTTTCCCCGTCCAGGATGTCTTCTaGGCGTTCTGGGCAGAGCAG +
Preference number: 5 (lower is better)
Translates to: PFWLPHALGVPMFPGTFPVQDVF*AFWAEQ
Trigger: CTGCTCTGCCCAGAACGCCAAGAAGACATCCTGGAC...GGGGAAAGTTCCAGGAAACATAGGTACCCCCAGAGCATGTGGGAGCCAGAAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR CAA 90 bp CAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTCCTGGGTGCTGGGTGTaGAGTTCCCCAGGAAGATCT +
Preference number: 5 (lower is better)
Translates to: QGCWGLIHSHGFAEPRGTPGCWV*SSPGRS
Trigger: AGATCTTCCTGGGGAACTCAACACCCAGCACCCAGG...AGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CAA 90 bp TGTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGCAGGCGGTCCTTCTCTaGGATCAGTTCCAACACCCG +
Preference number: 5 (lower is better)
Translates to: CQGCWGLIHSHGFAEPRGQAVLL*DQFQHP
Trigger: CGGGTGTTGGAACTGATCCAAGAGAAGGACCGCCTG...CCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CAA 90 bp CTGCCCTCCAAGCTCCTCCTGGTACATGGCATCCCTCCTCTCAGCCTCCTGTTGAATCGGCCAAAGATCTaGCTACAGGCCACACAGCAC +
Preference number: 5 (lower is better)
Translates to: LPSKLLLVHGIPPLSLLLNRPKI*LQATQH
Trigger: GTGCTGTGTGGCCTGTAGCAAGATCTTTGGCCGATT...CAACAGGAGGCTGAGAGGAGGGATGCCATGTACCAGGAGGAGCTTGGAGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR CAA 90 bp TGTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGGACGCAGAGCCTTCCTaGAGCCTCAGTTTCCCAACC +
Preference number: 5 (lower is better)
Translates to: CQGCWGLIHSHGFAEPRGDAEPS*SLSFPT
Trigger: GGTTGGGAAACTGAGGCTCAAGGAAGGCTCTGCGTC...CCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CAA 90 bp AGCCATGGAAGAGAGATGCTGGAGCCTCTGCCACAGGCGGTCCTTCTCTTGGATGACGCAGAGCCTTCCTaGAGCCTCAGTTTCCCAACC +
Preference number: 5 (lower is better)
Translates to: SHGREMLEPLPQAVLLLDDAEPS*SLSFPT
Trigger: GGTTGGGAAACTGAGGCTCAAGGAAGGCTCTGCGTC...ATCCAAGAGAAGGACCGCCTGTGGCAGAGGCTCCAGCATCTCTCTTCCATGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR CAA 90 bp AGCTGGCACTTCCCCAAGTGGGCGCTGAGGTCATGGAGTTCCAGCATCTTCAGGTATGCGGCTGGGATCTaGAGGATGCCAAGGAGATGG +
Preference number: 5 (lower is better)
Translates to: SWHFPKWALRSWSSSIFRYAAGI*RMPRRW
Trigger: CCATCTCCTTGGCATCCTCAAGATCCCAGCCGCATA...CCTGAAGATGCTGGAACTCCATGACCTCAGCGCCCACTTGGGGAAGTGCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374155.7
CDS-3UTR CAA 90 bp CCCTTCTGGCTCCCACATGCTCTGGGGGTACCTATGTTTCCTGGAACTTTCCCCTCTCGTCTCTGTCACTaGGTTGGGCTGAGAGGCAGC +
Preference number: 5 (lower is better)
Translates to: PFWLPHALGVPMFPGTFPSRLCH*VGLRGS
Trigger: GCTGCCTCTCAGCCCAACCAAGTGACAGAGACGAGA...GGGGAAAGTTCCAGGAAACATAGGTACCCCCAGAGCATGTGGGAGCCAGAAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR CAA 90 bp AGTCATGGATTTGCTGAGCCCAGAGGGACTTTAGAGAGGATGGGGCCCAACTCTTCTCCTTCCCTGGGTTaGGGTGGAACTGGAGCAGCG +
Preference number: 5 (lower is better)
Translates to: SHGFAEPRGTLERMGPNSSPSLG*GGTGAA
Trigger: CGCTGCTCCAGTTCCACCCAAACCCAGGGAAGGAGA...AGAGTTGGGCCCCATCCTCTCTAAAGTCCCTCTGGGCTCAGCAAATCCATGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CAA 90 bp AGCAGCGGTCTCTCTTCTTGTAATCCATGGAGCAAGCATGGCAGAGCAGGCCTCCAGGCGGTCCTTCTCTaGGATCAGTTCCAACACCCG +
Preference number: 5 (lower is better)
Translates to: SSGLSSCNPWSKHGRAGLQAVLL*DQFQHP
Trigger: CGGGTGTTGGAACTGATCCAAGAGAAGGACCGCCTG...GAGGCCTGCTCTGCCATGCTTGCTCCATGGATTACAAGAAGAGAGACCGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CAA 90 bp AGCTGGCACTTCCCCAAGTGGGCGCTGAGGTCATGGAGTTCCAGCATCTTCAGGAATCGGCCAAAGATCTaGCTACAGGCCACACAGCAC +
Preference number: 5 (lower is better)
Translates to: SWHFPKWALRSWSSSIFRNRPKI*LQATQH
Trigger: GTGCTGTGTGGCCTGTAGCAAGATCTTTGGCCGATT...CCTGAAGATGCTGGAACTCCATGACCTCAGCGCCCACTTGGGGAAGTGCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374155.7
CDS-3UTR CAA 90 bp GTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGATGGAATGCCCTTGGTTaGTCTCAGGAGGTCTCCCCT +
Preference number: 5 (lower is better)
Translates to: VRAAGVLSTVMDLLSPEGWNALG*SQEVSP
Trigger: AGGGGAGACCTCCTGAGACAAACCAAGGGCATTCCA...TCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374155.7
CDS TCA 90 bp CCTGCCAGCTGCTGTCCACTGGGTGCATCTTGCAGACAGATGGCTTaGCTGGTGTGTGAGTCCTCAATCTGGACATTTTCAGGCCCTCCA +
Preference number: 5 (lower is better)
Translates to: PASCCPLGASCRQMA*LVCESSIWTFSGPP
Trigger: TGGAGGGCCTGAAAATGTCCAGATTGAGGACTCACACACCAGTCAAGCCATCTGTCTGCAAGATGCACCCAGTGGACAGCAGCTGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
ENST00000463872.1
CDS GCA 90 bp CCTTGCAACTTGGACTGTGAGCTCAGGAAGGACTTTCGGCCTCACTaGCCAGCTCTCTCCTTACACAAAGCAGGACGCAGAGCCTTCCTT +
Preference number: 5 (lower is better)
Translates to: PCNLDCELRKDFRPH*PALSLHKAGRRAFL
Trigger: AAGGAAGGCTCTGCGTCCTGCTTTGTGTAAGGAGAGAGCTGGGCAGTGAGGCCGAAAGTCCTTCCTGAGCTCACAGTCCAAGTTGCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374155.7
ENST00000457754.6
ENST00000465568.5
ENST00000472496.1
ENST00000480164.5
CDS GCA 90 bp CCTTGCAACTTGGACTGTGAGCTCAGGAAGGACTTTCGGCCTCACTaGCCAGCTCTCTCCTTACACAAAGCAGGACGCAGAGCCTACAGA +
Preference number: 5 (lower is better)
Translates to: PCNLDCELRKDFRPH*PALSLHKAGRRAYR
Trigger: TCTGTAGGCTCTGCGTCCTGCTTTGTGTAAGGAGAGAGCTGGGCAGTGAGGCCGAAAGTCCTTCCTGAGCTCACAGTCCAAGTTGCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495721.1
CDS CCA 90 bp GAAGCCCTGCCAGCTGCTGTCCACTGGGTGCATCTTGCAGACAGATaGCTTGACTGGTGTGTGAGTCCTCAATCTGGACATTTTCAGGCC +
Preference number: 5 (lower is better)
Translates to: EALPAAVHWVHLADR*LDWCVSPQSGHFQA
Trigger: GGCCTGAAAATGTCCAGATTGAGGACTCACACACCAGTCAAGCCATCTGTCTGCAAGATGCACCCAGTGGACAGCAGCTGGCAGGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
ENST00000463872.1
CDS-3UTR CAA 90 bp TGTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGAGAGGGGTCTTCAACTaGTCCTGGGAACGGACAAAG +
Preference number: 5 (lower is better)
Translates to: CQGCWGLIHSHGFAEPRGRGVFN*SWERTK
Trigger: CTTTGTCCGTTCCCAGGACAAGTTGAAGACCCCTCT...CCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344321.8
ENST00000374155.7
CDS-3UTR CAA 90 bp AGTCATGGATTTGCTGAGCCCAGAGGGACTTTAGAGAGGATGGGGCCCAACTCTGTCCAGGATGTCTTCTaGGCGTTCTGGGCAGAGCAG +
Preference number: 5 (lower is better)
Translates to: SHGFAEPRGTLERMGPNSVQDVF*AFWAEQ
Trigger: CTGCTCTGCCCAGAACGCCAAGAAGACATCCTGGAC...AGAGTTGGGCCCCATCCTCTCTAAAGTCCCTCTGGGCTCAGCAAATCCATGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CAA 90 bp TGTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGTCCACTGGGTGCATCTaGCAGACAGATGGCTTGACT +
Preference number: 5 (lower is better)
Translates to: CQGCWGLIHSHGFAEPRGSTGCI*QTDGLT
Trigger: AGTCAAGCCATCTGTCTGCAAGATGCACCCAGTGGA...CCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CAA 90 bp AGTCATGGATTTGCTGAGCCCAGAGGGACTTTAGAGAGGATGGGGCCCAACTCTCCTGGGTGCTGGGTGTaGAGTTCCCCAGGAAGATCT +
Preference number: 5 (lower is better)
Translates to: SHGFAEPRGTLERMGPNSPGCWV*SSPGRS
Trigger: AGATCTTCCTGGGGAACTCAACACCCAGCACCCAGG...AGAGTTGGGCCCCATCCTCTCTAAAGTCCCTCTGGGCTCAGCAAATCCATGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CAA 90 bp CTTCTCGTGAATCAGGAAAGGTGGGCACCGCTGCTGGGTGAGTGGGGAGTGTGGCACTTCTGTTTGCACTaGTGGATTCTCCACGGTAGA +
Preference number: 5 (lower is better)
Translates to: LLVNQERWAPLLGEWGVWHFCLH*WILHGR
Trigger: TCTACCGTGGAGAATCCACAAGTGCAAACAGAAGTG...CCACACTCCCCACTCACCCAGCAGCGGTGCCCACCTTTCCTGATTCACGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CAA 90 bp CTTCTCGTGAATCAGGAAAGGTGGGCACCGCTGCTGGGTGAGTGGGGAGTGTGGAAGGGTCACTTCTGTTaGCACTTGTGGATTCTCCAC +
Preference number: 5 (lower is better)
Translates to: LLVNQERWAPLLGEWGVWKGHFC*HLWILH
Trigger: GTGGAGAATCCACAAGTGCAAACAGAAGTGACCCTT...CCACACTCCCCACTCACCCAGCAGCGGTGCCCACCTTTCCTGATTCACGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS TCA 90 bp CTGTCCACTGGGTGCATCTTGCAGACAGATGGCTTGACTGGTGTGTaGGTCCTCAATCTGGACATTTTCAGGCCCTCCATATGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: LSTGCILQTDGLTGV*VLNLDIFRPSICGW
Trigger: CCAGCCGCATATGGAGGGCCTGAAAATGTCCAGATTGAGGACTCACACACCAGTCAAGCCATCTGTCTGCAAGATGCACCCAGTGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
ENST00000463872.1
CDS CCA 90 bp GGTCCACCTGAGACATCTGTTTCTCATCTCCCAGTGGAATGCCCTTaGTTTGTCTCAGGAGGTCTCCCCTCTCCTGAAGGGTGTCCTGAT +
Preference number: 5 (lower is better)
Translates to: GPPETSVSHLPVECP*FVSGGLPSPEGCPD
Trigger: ATCAGGACACCCTTCAGGAGAGGGGAGACCTCCTGAGACAAACCAAGGGCATTCCACTGGGAGATGAGAAACAGATGTCTCAGGTGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374155.7
CDS-3UTR CAA 90 bp CACAGTCATGGATTTGCTGAGCCCAGAGGGACTTTAGAGAGGATGGGGCCCAACTGTGAGTCCCCTCTGTaGTTCTCTGACCCTCTGCAA +
Preference number: 5 (lower is better)
Translates to: HSHGFAEPRGTLERMGPNCESPL*FSDPLQ
Trigger: TTGCAGAGGGTCAGAGAACAACAGAGGGGACTCACA...GTTGGGCCCCATCCTCTCTAAAGTCCCTCTGGGCTCAGCAAATCCATGACTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CAA 90 bp AGTCATGGATTTGCTGAGCCCAGAGGGACTTTAGAGAGGATGGGGCCCAACTCTCCTAGTGACTCTGCCTaGCACAGCAGTCCCAGGATT +
Preference number: 5 (lower is better)
Translates to: SHGFAEPRGTLERMGPNSPSDSA*HSSPRI
Trigger: AATCCTGGGACTGCTGTGCAAGGCAGAGTCACTAGG...AGAGTTGGGCCCCATCCTCTCTAAAGTCCCTCTGGGCTCAGCAAATCCATGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CAA 90 bp TCCTTCTCTTGGATCAGTTCCAACACCCGCCTCTTCATGGCCTGGACCAAGTCCGTCCATACCATTCCCTaGTCCTGGGAACGGACAAAG +
Preference number: 5 (lower is better)
Translates to: SFSWISSNTRLFMAWTKSVHTIP*SWERTK
Trigger: CTTTGTCCGTTCCCAGGACAAGGGAATGGTATGGAC...GGACTTGGTCCAGGCCATGAAGAGGCGGGTGTTGGAACTGATCCAAGAGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS GCA 90 bp TCTTCAGGTCCACCTGAGACATCTGTTTCTCATCTCCCAGTGGAATaGCCTTGGTTTGTCTCAGGAGGTCTCCCCTCTCCTGAAGGGTGT +
Preference number: 5 (lower is better)
Translates to: SSGPPETSVSHLPVE*PWFVSGGLPSPEGC
Trigger: ACACCCTTCAGGAGAGGGGAGACCTCCTGAGACAAACCAAGGGCATTCCACTGGGAGATGAGAAACAGATGTCTCAGGTGGACCTGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374155.7
CDS CCA 90 bp CCAGCTGCTGTCCACTGGGTGCATCTTGCAGACAGATGGCTTGACTaGTGTGTGAGTCCTCAATCTGGACATTTTCAGGCCCTCCATATG +
Preference number: 5 (lower is better)
Translates to: PAAVHWVHLADRWLD*CVSPQSGHFQALHM
Trigger: CATATGGAGGGCCTGAAAATGTCCAGATTGAGGACTCACACACCAGTCAAGCCATCTGTCTGCAAGATGCACCCAGTGGACAGCAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
ENST00000463872.1
CDS CCA 90 bp CAGCATCTTCAGGTCCACCTGAGACATCTGTTTCTCATCTCCCAGTaGAATGCCCTTGGTTTGTCTCAGGAGGTCTCCCCTCTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: QHLQVHLRHLFLISQ*NALGLSQEVSPLLK
Trigger: CTTCAGGAGAGGGGAGACCTCCTGAGACAAACCAAGGGCATTCCACTGGGAGATGAGAAACAGATGTCTCAGGTGGACCTGAAGATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374155.7
CDS-3UTR CAA 90 bp GGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTTTAAACGGACAAAGTGGATaGGCTCCATGTTTCCCCGCT +
Preference number: 5 (lower is better)
Translates to: GCWGLIHSHGFAEPRGTLNGQSG*APCFPA
Trigger: AGCGGGGAAACATGGAGCCAATCCACTTTGTCCGTT...TAAAGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CAA 90 bp AGCTGCTGGAGAGTCCAAGATAGTGCAGGCTTCACTTCTCGTGAATCAGGAAAGCCTGGGTGCTGGGTGTaGAGTTCCCCAGGAAGATCT +
Preference number: 5 (lower is better)
Translates to: SCWRVQDSAGFTSRESGKPGCWV*SSPGRS
Trigger: AGATCTTCCTGGGGAACTCAACACCCAGCACCCAGG...CTTTCCTGATTCACGAGAAGTGAAGCCTGCACTATCTTGGACTCTCCAGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CAA 90 bp AGCTGCTGGAGAGTCCAAGATAGTGCAGGCTTCACTTCTCGTGAATCAGGAAAGCCAAGTCTGAGGCTCTaGATCTCGTCCTGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: SCWRVQDSAGFTSRESGKPSLRL*ISSCRD
Trigger: GTCCCTGCAGGACGAGATCAAGAGCCTCAGACTTGG...CTTTCCTGATTCACGAGAAGTGAAGCCTGCACTATCTTGGACTCTCCAGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CAA 90 bp AAATGTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGCAGCTCTTAGGTCTTaGGTGACCTTGAGGATGGCT +
Preference number: 5 (lower is better)
Translates to: KCQGCWGLIHSHGFAEPRAALRS*VTLRMA
Trigger: AGCCATCCTCAAGGTCACCAAAGACCTAAGAGCTGC...TCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGACATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CAA 90 bp TGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAGGGCTGGGAGTCCAGGATGTCTTCTaGGCGTTCTGGGCAGAGCAG +
Preference number: 5 (lower is better)
Translates to: CLRSSVSRMRTGQTRGLGVQDVF*AFWAEQ
Trigger: CTGCTCTGCCCAGAACGCCAAGAAGACATCCTGGAC...TCCCAGCCCTCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CAA 90 bp AAATGTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGATGTGAGTCCCCTCTGTaGTTCTCTGACCCTCTGCAA +
Preference number: 5 (lower is better)
Translates to: KCQGCWGLIHSHGFAEPRCESPL*FSDPLQ
Trigger: TTGCAGAGGGTCAGAGAACAACAGAGGGGACTCACA...TCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGACATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CAA 90 bp TCCTTCTCTTGGATCAGTTCCAACACCCGCCTCTTCATGGCCTGGACCAAGTCCAAGGGTCACTTCTGTTaGCACTTGTGGATTCTCCAC +
Preference number: 5 (lower is better)
Translates to: SFSWISSNTRLFMAWTKSKGHFC*HLWILH
Trigger: GTGGAGAATCCACAAGTGCAAACAGAAGTGACCCTT...GGACTTGGTCCAGGCCATGAAGAGGCGGGTGTTGGAACTGATCCAAGAGAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS-3UTR CAA 90 bp AAATGTCAGGGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAAATCGGCCAAAGATCTaGCTACAGGCCACACAGCAC +
Preference number: 5 (lower is better)
Translates to: KCQGCWGLIHSHGFAEPRNRPKI*LQATQH
Trigger: GTGCTGTGTGGCCTGTAGCAAGATCTTTGGCCGATT...TCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCCCTGACATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CAA 90 bp AGCTGCTGGAGAGTCCAAGATAGTGCAGGCTTCACTTCTCGTGAATCAGGAAAGGCAGCTCTTAGGTCTTaGGTGACCTTGAGGATGGCT +
Preference number: 5 (lower is better)
Translates to: SCWRVQDSAGFTSRESGKAALRS*VTLRMA
Trigger: AGCCATCCTCAAGGTCACCAAAGACCTAAGAGCTGC...CTTTCCTGATTCACGAGAAGTGAAGCCTGCACTATCTTGGACTCTCCAGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CAA 90 bp AGCTGCTGGAGAGTCCAAGATAGTGCAGGCTTCACTTCTCGTGAATCAGGAAAGTCCACTGGGTGCATCTaGCAGACAGATGGCTTGACT +
Preference number: 5 (lower is better)
Translates to: SCWRVQDSAGFTSRESGKSTGCI*QTDGLT
Trigger: AGTCAAGCCATCTGTCTGCAAGATGCACCCAGTGGA...CTTTCCTGATTCACGAGAAGTGAAGCCTGCACTATCTTGGACTCTCCAGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CAA 90 bp GGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTTTACACTTCTGTTTGCACTaGTGGATTCTCCACGGTAGA +
Preference number: 5 (lower is better)
Translates to: GCWGLIHSHGFAEPRGTLHFCLH*WILHGR
Trigger: TCTACCGTGGAGAATCCACAAGTGCAAACAGAAGTG...TAAAGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CAA 90 bp AGTCATGGATTTGCTGAGCCCAGAGGGACTTTAGAGAGGATGGGGCCCAACTCTCACTTCTGTTTGCACTaGTGGATTCTCCACGGTAGA +
Preference number: 5 (lower is better)
Translates to: SHGFAEPRGTLERMGPNSHFCLH*WILHGR
Trigger: TCTACCGTGGAGAATCCACAAGTGCAAACAGAAGTG...AGAGTTGGGCCCCATCCTCTCTAAAGTCCCTCTGGGCTCAGCAAATCCATGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CAA 90 bp GGCTGCTGGGGTCTTATCCACAGTCATGGATTTGCTGAGCCCAGAGGGACTTTAAAGGGTCACTTCTGTTaGCACTTGTGGATTCTCCAC +
Preference number: 5 (lower is better)
Translates to: GCWGLIHSHGFAEPRGTLKGHFC*HLWILH
Trigger: GTGGAGAATCCACAAGTGCAAACAGAAGTGACCCTT...TAAAGTCCCTCTGGGCTCAGCAAATCCATGACTGTGGATAAGACCCCAGCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CAA 90 bp AAGTGCTGGTGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGACCAAGTCTGAGGCTCTaGATCTCGTCCTGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: KCWCLRSSVSRMRTGQTRPSLRL*ISSCRD
Trigger: GTCCCTGCAGGACGAGATCAAGAGCCTCAGACTTGG...TCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCACCAGCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CAA 90 bp AAGTGCTGGTGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGACAGGCGGTCCTTCTCTaGGATCAGTTCCAACACCCG +
Preference number: 5 (lower is better)
Translates to: KCWCLRSSVSRMRTGQTRQAVLL*DQFQHP
Trigger: CGGGTGTTGGAACTGATCCAAGAGAAGGACCGCCTG...TCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCACCAGCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS TCA 90 bp CTCTCTCCTTACACAAAGCAGGACGCAGAGCCTACAGAGGGAAAGTaGCTAATCTTGGGTGACATAGCAAGTTACCTAGTAGGGGGAGAA +
Preference number: 5 (lower is better)
Translates to: LSPYTKQDAEPTEGK*LILGDIASYLVGGE
Trigger: TTCTCCCCCTACTAGGTAACTTGCTATGTCACCCAAGATTAGTCACTTTCCCTCTGTAGGCTCTGCGTCCTGCTTTGTGTAAGGAGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495721.1
CDS-3UTR CAA 90 bp AAGTGCTGGTGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAGCAGCTCTTAGGTCTTaGGTGACCTTGAGGATGGCT +
Preference number: 5 (lower is better)
Translates to: KCWCLRSSVSRMRTGQTRAALRS*VTLRMA
Trigger: AGCCATCCTCAAGGTCACCAAAGACCTAAGAGCTGC...TCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCACCAGCACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS-3UTR CAA 90 bp AAGTGCTGGTGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGAAGAGGGGTCTTCAACTaGTCCTGGGAACGGACAAAG +
Preference number: 5 (lower is better)
Translates to: KCWCLRSSVSRMRTGQTRRGVFN*SWERTK
Trigger: CTTTGTCCGTTCCCAGGACAAGTTGAAGACCCCTCT...TCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCACCAGCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344321.8
ENST00000374155.7
CDS-3UTR CAA 90 bp AAGTGCTGGTGCCTTAGATCTTCAGTGTCTAGAATGAGGACTGGACAAACAAGATGTGAGTCCCCTCTGTaGTTCTCTGACCCTCTGCAA +
Preference number: 5 (lower is better)
Translates to: KCWCLRSSVSRMRTGQTRCESPL*FSDPLQ
Trigger: TTGCAGAGGGTCAGAGAACAACAGAGGGGACTCACA...TCTTGTTTGTCCAGTCCTCATTCTAGACACTGAAGATCTAAGGCACCAGCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS CCA 72 bp AACTCAGTCCCAGCCCAGCAGCCTGGAGGGGGAACCTaGCTCACAGCGGTGGGGGAACCGCAGACGCTGGGG +
Preference number: 6 (lower is better)
Translates to: NSVPAQQPGGGT*LTAVGEPQTLG
Trigger: CCCCAGCGTCTGCGGTTCCCCCACCGCTGTGAGCCAGGTTCCCCCTCCAGGCTGCTGGGCTGGGACTGAGTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000472496.1
CDS CCA 72 bp AACTCAGTCCCAGCCCAGCAGCCTGGAGGGGGAACCTaGCTCACAGCGGTGGGGGAACCGCAGACGCTGCAG +
Preference number: 6 (lower is better)
Translates to: NSVPAQQPGGGT*LTAVGEPQTLQ
Trigger: CTGCAGCGTCTGCGGTTCCCCCACCGCTGTGAGCCAGGTTCCCCCTCCAGGCTGCTGGGCTGGGACTGAGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000457754.6
ENST00000465568.5
ENST00000480164.5
CDS CCA 72 bp GCTCCAGGCAGCCACAGAGTCTGTGCAGCTCGGCACTaGTGTCCGTCACTGGCCCCTGCCCATCCCCATAGC +
Preference number: 6 (lower is better)
Translates to: APGSHRVCAARH*CPSLAPAHPHS
Trigger: GCTATGGGGATGGGCAGGGGCCAGTGACGGACACCAGTGCCGAGCTGCACAGACTCTGTGGCTGCCTGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
ENST00000495721.1
CDS CCA 72 bp AACTCAGTCCCAGCCCAGCAGCCTGGAGGGGGAACCTaGCTCACAGCGGTGGGGGAACCGCAGACGCTTCCT +
Preference number: 6 (lower is better)
Translates to: NSVPAQQPGGGT*LTAVGEPQTLP
Trigger: AGGAAGCGTCTGCGGTTCCCCCACCGCTGTGAGCCAGGTTCCCCCTCCAGGCTGCTGGGCTGGGACTGAGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000463618.6
CDS TCA 72 bp CCTCAGCCAGCTGCCCACGGGCCAGGCAGAAGCGGATaGAGGCACGGCCTTTCCCCAGAGGGGTCTTCAACT +
Preference number: 6 (lower is better)
Translates to: PQPAAHGPGRSG*RHGLSPEGSST
Trigger: AGTTGAAGACCCCTCTGGGGAAAGGCCGTGCCTTCATCCGCTTCTGCCTGGCCCGTGGGCAGCTGGCTGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344321.8
ENST00000374155.7
CDS GCA 72 bp CATTCCCTGGTGAGCTCTGAGTTCAGGAGGCAAAGCTaGAGGGCCTCAGCCAGCTGCCCACGGGCCAGGCAG +
Preference number: 6 (lower is better)
Translates to: HSLVSSEFRRQS*RASASCPRARQ
Trigger: CTGCCTGGCCCGTGGGCAGCTGGCTGAGGCCCTGCAGCTTTGCCTCCTGAACTCAGAGCTCACCAGGGAATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344321.8
ENST00000374155.7
CDS CCA 72 bp CCTCCAGAGCCTCCACCTCCACATGGCAGCTTCTCCTaGTGGCTCACTTTCCTCTCTCCCAAGGCTGGTCCT +
Preference number: 6 (lower is better)
Translates to: PPEPPPPHGSFS*WLTFLSPKAGP
Trigger: AGGACCAGCCTTGGGAGAGAGGAAAGTGAGCCACCAGGAGAAGCTGCCATGTGGAGGTGGAGGCTCTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374155.7
CDS GCA 72 bp TTGGCTCCATGTTTCCCCGCTGCCGTCGTAGGGCAGTaGAGAGAAAGTCCCAGTAATCCTTCCGAGGCCCCA +
Preference number: 6 (lower is better)
Translates to: LAPCFPAAVVGQ*RESPSNPSEAP
Trigger: TGGGGCCTCGGAAGGATTACTGGGACTTTCTCTGCACTGCCCTACGACGGCAGCGGGGAAACATGGAGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
ENST00000495721.1
CDS CAA 72 bp CCCATTGAGAGCATAGAGAGAGTCCAGGATGTCTTCTaGGCGTTCTGGGCAGAGCAGAGGGCTCCGGGGTCC +
Preference number: 6 (lower is better)
Translates to: PIESIERVQDVF*AFWAEQRAPGS
Trigger: GGACCCCGGAGCCCTCTGCTCTGCCCAGAACGCCAAGAAGACATCCTGGACTCTCTCTATGCTCTCAATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
ENST00000463872.1
CDS CAA 90 bp CCGGGGTCCATACCATTCCCTTGTCCTGGGAACGGACAAAGTGGATaGGCTCCATGTTTCCCCGCTGCCGTCGTAGGGCAGTGCAGAGAA +
Preference number: 6 (lower is better)
Translates to: PGSIPFPCPGNGQSG*APCFPAAVVGQCRE
Trigger: TTCTCTGCACTGCCCTACGACGGCAGCGGGGAAACATGGAGCCAATCCACTTTGTCCGTTCCCAGGACAAGGGAATGGTATGGACCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS CAA 72 bp GGGTCTTCAACTTGTCCTGGGAACGGACAAAGTGGATaGGCTCCATGTTTCCCCGCTGCCGTCGTAGGGCAG +
Preference number: 6 (lower is better)
Translates to: GSSTCPGNGQSG*APCFPAAVVGQ
Trigger: CTGCCCTACGACGGCAGCGGGGAAACATGGAGCCAATCCACTTTGTCCGTTCCCAGGACAAGTTGAAGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344321.8
ENST00000374155.7
CDS TCA 72 bp CTGGCTGCTGGAGGTCCAACTCGAAGGCCACCCCATTaGGAGCATAGAGAGAGTCCAGGATGTCTTCTTGGC +
Preference number: 6 (lower is better)
Translates to: LAAGGPTRRPPH*EHRESPGCLLG
Trigger: GCCAAGAAGACATCCTGGACTCTCTCTATGCTCTCAATGGGGTGGCCTTCGAGTTGGACCTCCAGCAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
ENST00000463872.1
CDS TCA 72 bp TCACAGCGGTGGGGGAACCGCAGACGCTTCCTGAGCTaGAGCAGAATGAAACTGCTGCTCCAATTCCCGCTT +
Preference number: 6 (lower is better)
Translates to: SQRWGNRRRFLS*SRMKLLLQFPL
Trigger: AAGCGGGAATTGGAGCAGCAGTTTCATTCTGCTTCAGCTCAGGAAGCGTCTGCGGTTCCCCCACCGCTGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463618.6
CDS CCA 72 bp AGAGGGGTCTTCAACTTGTCCTGGGAACGGACAAAGTaGATTGGCTCCATGTTTCCCCGCTGCCGTCGTAGG +
Preference number: 6 (lower is better)
Translates to: RGVFNLSWERTK*IGSMFPRCRRR
Trigger: CCTACGACGGCAGCGGGGAAACATGGAGCCAATCCACTTTGTCCGTTCCCAGGACAAGTTGAAGACCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344321.8
ENST00000374155.7
CDS CCA 72 bp TTTTTCTGGGTCTCCTTCCCTGGGTTTGGGTGGAACTaGAGCAGCGTGACTCTGAGAACATGGGCCAGGCTC +
Preference number: 6 (lower is better)
Translates to: FFWVSFPGFGWN*SSVTLRTWARL
Trigger: GAGCCTGGCCCATGTTCTCAGAGTCACGCTGCTCCAGTTCCACCCAAACCCAGGGAAGGAGACCCAGAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
CDS CCA 72 bp ACTCTGCCTTGCACAGCAGTCCCAGGATTTACAGCCTaGGAAGAAGTAACTCAGTCCCAGCCCAGCAGCCTG +
Preference number: 6 (lower is better)
Translates to: TLPCTAVPGFTA*EEVTQSQPSSL
Trigger: CAGGCTGCTGGGCTGGGACTGAGTTACTTCTTCCCAGGCTGTAAATCCTGGGACTGCTGTGCAAGGCAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000457754.6
ENST00000463618.6
ENST00000465568.5
ENST00000472496.1
ENST00000480164.5
CDS CCA 72 bp GTCCATACCATTCCCTTGTCCTGGGAACGGACAAAGTaGATTGGCTCCATGTTTCCCCGCTGCCGTCGTAGG +
Preference number: 6 (lower is better)
Translates to: VHTIPLSWERTK*IGSMFPRCRRR
Trigger: CCTACGACGGCAGCGGGGAAACATGGAGCCAATCCACTTTGTCCGTTCCCAGGACAAGGGAATGGTATGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS CAA 72 bp ATACCATTCCCTTGTCCTGGGAACGGACAAAGTGGATaGGCTCCATGTTTCCCCGCTGCCGTCGTAGGGCAG +
Preference number: 6 (lower is better)
Translates to: IPFPCPGNGQSG*APCFPAAVVGQ
Trigger: CTGCCCTACGACGGCAGCGGGGAAACATGGAGCCAATCCACTTTGTCCGTTCCCAGGACAAGGGAATGGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457754.6
CDS CAA 72 bp GCAGAGACGGCAGCTGCTCTTAGGTCTTTGGTGACCTaGAGGATGGCTCCCTCTTCTGCCATGGGTACTTGG +
Preference number: 6 (lower is better)
Translates to: AETAAALRSLVT*RMAPSSAMGTW
Trigger: CCAAGTACCCATGGCAGAAGAGGGAGCCATCCTCAAGGTCACCAAAGACCTAAGAGCAGCTGCCGTCTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465568.5
ENST00000495721.1
CDS CAA 90 bp GTCCTAGCACTGCATGGATACCGCCGAGAAAATCGGCCAAAGATCTaGCTACAGGCCACACAGCACTCGGGAGCCATGGAAGAGAGATGC +
Preference number: 6 (lower is better)
Translates to: VLALHGYRRENRPKI*LQATQHSGAMEERC
Trigger: GCATCTCTCTTCCATGGCTCCCGAGTGCTGTGTGGCCTGTAGCAAGATCTTTGGCCGATTTTCTCGGCGGTATCCATGCAGTGCTAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374155.7
CDS CAA 90 bp CACCTGAGACATCTGTTTCTCATCTCCCAGTGGAATGCCCTTGGTTaGTCTCAGGAGGTCTCCCCTCTCCTGAAGGGTGTCCTGATGCCC +
Preference number: 6 (lower is better)
Translates to: HLRHLFLISQWNALG*SQEVSPLLKGVLMP
Trigger: GGGCATCAGGACACCCTTCAGGAGAGGGGAGACCTCCTGAGACAAACCAAGGGCATTCCACTGGGAGATGAGAAACAGATGTCTCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374155.7
CDS CAA 72 bp ATGGCAGAGACGGCAGCTCTTAGGTCTTTGGTGACCTaGAGGATGGCTCCCTCTTCTGCCATGGGTACTTGG +
Preference number: 6 (lower is better)
Translates to: MAETAALRSLVT*RMAPSSAMGTW
Trigger: CCAAGTACCCATGGCAGAAGAGGGAGCCATCCTCAAGGTCACCAAAGACCTAAGAGCTGCCGTCTCTGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
ENST00000472496.1
CDS TCA 72 bp AGTCAGCTGAGCGGTCCACCTGAGTGCTTCCTGAGCTaGAGCAGAATGAAACTGCTGCTCCAATTCCCGCTT +
Preference number: 6 (lower is better)
Translates to: SQLSGPPECFLS*SRMKLLLQFPL
Trigger: AAGCGGGAATTGGAGCAGCAGTTTCATTCTGCTTCAGCTCAGGAAGCACTCAGGTGGACCGCTCAGCTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497857.5
CDS GCA 72 bp CCACCTGAGACATCTGTTTCTCATCTCCCAGTGGAATaGCCTTGGTTTGTCTCAGGAGGTCTCCCCTCTCCT +
Preference number: 6 (lower is better)
Translates to: PPETSVSHLPVE*PWFVSGGLPSP
Trigger: AGGAGAGGGGAGACCTCCTGAGACAAACCAAGGGCATTCCACTGGGAGATGAGAAACAGATGTCTCAGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374155.7
CDS CCA 72 bp CAGGTCCACCTGAGACATCTGTTTCTCATCTCCCAGTaGAATGCCCTTGGTTTGTCTCAGGAGGTCTCCCCT +
Preference number: 6 (lower is better)
Translates to: QVHLRHLFLISQ*NALGLSQEVSP
Trigger: AGGGGAGACCTCCTGAGACAAACCAAGGGCATTCCACTGGGAGATGAGAAACAGATGTCTCAGGTGGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374155.7
CDS CAA 72 bp CATCTGTTTCTCATCTCCCAGTGGAATGCCCTTGGTTaGTCTCAGGAGGTCTCCCCTCTCCTGAAGGGTGTC +
Preference number: 6 (lower is better)
Translates to: HLFLISQWNALG*SQEVSPLLKGV
Trigger: GACACCCTTCAGGAGAGGGGAGACCTCCTGAGACAAACCAAGGGCATTCCACTGGGAGATGAGAAACAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374155.7
CDS CCA 72 bp GTCCACTGGGTGCATCTTGCAGACAGATGGCTTGACTaGTGTGTGAGTCCTCAATCTGGACATTTTCAGGCC +
Preference number: 6 (lower is better)
Translates to: VHWVHLADRWLD*CVSPQSGHFQA
Trigger: GGCCTGAAAATGTCCAGATTGAGGACTCACACACCAGTCAAGCCATCTGTCTGCAAGATGCACCCAGTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
ENST00000463872.1
CDS TCA 72 bp GGGTGCATCTTGCAGACAGATGGCTTGACTGGTGTGTaGGTCCTCAATCTGGACATTTTCAGGCCCTCCATA +
Preference number: 6 (lower is better)
Translates to: GCILQTDGLTGV*VLNLDIFRPSI
Trigger: TATGGAGGGCCTGAAAATGTCCAGATTGAGGACTCACACACCAGTCAAGCCATCTGTCTGCAAGATGCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344321.8
ENST00000374155.7
ENST00000457754.6
ENST00000463872.1
CDS TCA 72 bp CGCAGAGCCTACAGAGGGAAAGTGACTAATCTTGGGTaGCATAGCAAGTTACCTAGTAGGGGGAGAATCCCA +
Preference number: 6 (lower is better)
Translates to: RRAYRGKVTNLG*HSKLPSRGRIP
Trigger: TGGGATTCTCCCCCTACTAGGTAACTTGCTATGTCACCCAAGATTAGTCACTTTCCCTCTGTAGGCTCTGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495721.1
CDS TCA 72 bp TACACAAAGCAGGACGCAGAGCCTACAGAGGGAAAGTaGCTAATCTTGGGTGACATAGCAAGTTACCTAGTA +
Preference number: 6 (lower is better)
Translates to: YTKQDAEPTEGK*LILGDIASYLV
Trigger: TACTAGGTAACTTGCTATGTCACCCAAGATTAGTCACTTTCCCTCTGTAGGCTCTGCGTCCTGCTTTGTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495721.1