Pregenerated sensors for RUFY3 (Homo sapiens)
Ensembl gene IDs: ENSG00000018189Ensembl transcript IDs: ENST00000226328.8, ENST00000381006.8, ENST00000417478.6, ENST00000502653.5, ENST00000504805.6, ENST00000512331.5, ENST00000513597.5, ENST00000514898.1, ENST00000515442.1, ENST00000515479.5
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTTCATCACACTGCAATGGCAGAACAGGCTTGCAGATACAGACATaGACAATGCACCGAGAATCTGGTATTATCAAGGACTGGGTTGTA | + |
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Preference number: 1 (lower is better) Translates to: GSSHCNGRTGLQIQT*TMHRESGIIKDWVV Trigger: TACAACCCAGTCCTTGATAATACCAGATTCTCGGTGCATTGTTCATGTCTGTATCTGCAAGCCTGTTCTGCCATTGCAGTGTGATGAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| 3UTR CCA 90 bp | GTTCAAGTTCACATGGTAGTTACCTCTAGGTTCATCACACTGCAATaGCAGAACAGGCTTGCAGATACAGACATGAACAATGCACCGAGA | + |
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Preference number: 1 (lower is better) Translates to: VQVHMVVTSRFITLQ*QNRLADTDMNNAPR Trigger: TCTCGGTGCATTGTTCATGTCTGTATCTGCAAGCCTGTTCTGCCATTGCAGTGTGATGAACCTAGAGGTAACTACCATGTGAACTTGAAC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| 3UTR CCA 90 bp | CAGAACAGGCTTGCAGATACAGACATGAACAATGCACCGAGAATCTaGTATTATCAAGGACTGGGTTGTAAAGGCATCATTAGTATATGT | + |
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Preference number: 1 (lower is better) Translates to: QNRLADTDMNNAPRI*YYQGLGCKGIISIC Trigger: ACATATACTAATGATGCCTTTACAACCCAGTCCTTGATAATACCAGATTCTCGGTGCATTGTTCATGTCTGTATCTGCAAGCCTGTTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| 3UTR TCA 90 bp | AAACGCATGCTATGTGTAGGTTTTAGAAAGTTCAATTTCGGTATTTaGTCACTCCTTCCAAATGCTCGTAGAAAAGGCAACCCATCACCA | + |
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Preference number: 1 (lower is better) Translates to: KRMLCVGFRKFNFGI*SLLPNARRKGNPSP Trigger: TGGTGATGGGTTGCCTTTTCTACGAGCATTTGGAAGGAGTGATCAAATACCGAAATTGAACTTTCTAAAACCTACACATAGCATGCGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| 3UTR-3UTR GCA 90 bp | TTCTCTCTGAACTGCCTAAGTAGGAAGCGGAATTGCAGGAAAACGGCAGAGGTAATGGCAGAACAGGCTTaGAGATACAGACATGAACAA | + |
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Preference number: 2 (lower is better) Translates to: FSLNCLSRKRNCRKTAEVMAEQA*RYRHEQ Trigger: TTGTTCATGTCTGTATCTGCAAGCCTGTTCTGCCAT...TACCTCTGCCGTTTTCCTGCAATTCCGCTTCCTACTTAGGCAGTTCAGAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTCTCTGAACTGCCTAAGTAGGAAGCGGAATTGCAGGAAAACGGCAGAGGTAAATGCACCGAGAATCTaGTATTATCAAGGACTGGGT | + |
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Preference number: 2 (lower is better) Translates to: FSLNCLSRKRNCRKTAEVNAPRI*YYQGLG Trigger: ACCCAGTCCTTGATAATACCAGATTCTCGGTGCATT...TACCTCTGCCGTTTTCCTGCAATTCCGCTTCCTACTTAGGCAGTTCAGAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| 3UTR-3UTR GCA 90 bp | GGTTATTCTATAAGGAAAAGCCTTTGTCAGAGTTTGGCTGTCTCCTTCCTTTCCCTAGGTTCATCACACTaGAATGGCAGAACAGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: GYSIRKSLCQSLAVSFLSLGSSH*NGRTGL Trigger: CAAGCCTGTTCTGCCATTGCAGTGTGATGAACCTAG...GGAAAGGAAGGAGACAGCCAAACTCTGACAAAGGCTTTTCCTTATAGAATAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| 3UTR-3UTR TCA 90 bp | GGTTATTCTATAAGGAAAAGCCTTTGTCAGAGTTTGGCTGTCTCCTTCCTTTCCCCCACAAAAGATGTGTaGCTAAGTGGACAAAGAACT | + |
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Preference number: 2 (lower is better) Translates to: GYSIRKSLCQSLAVSFLSPTKDV*LSGQRT Trigger: AGTTCTTTGTCCACTTAGTCACACATCTTTTGTGGG...GGAAAGGAAGGAGACAGCCAAACTCTGACAAAGGCTTTTCCTTATAGAATAACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| 3UTR-3UTR CCA 90 bp | TTTGGGTTATTCTATAAGGAAAAGCCTTTGTCAGAGTTTGGCTGTCTCCTTCCTTTCATCACACTGCAATaGCAGAACAGGCTTGCAGAT | + |
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Preference number: 2 (lower is better) Translates to: FGLFYKEKPLSEFGCLLPFITLQ*QNRLAD Trigger: ATCTGCAAGCCTGTTCTGCCATTGCAGTGTGATGAA...AGGAAGGAGACAGCCAAACTCTGACAAAGGCTTTTCCTTATAGAATAACCCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| 3UTR-3UTR CCA 90 bp | GGTTATTCTATAAGGAAAAGCCTTTGTCAGAGTTTGGCTGTCTCCTTCCTTTCCAGTGAAAAGGGGTCATaGTCTAAGAGACACAGAACT | + |
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Preference number: 2 (lower is better) Translates to: GYSIRKSLCQSLAVSFLSSEKGS*SKRHRT Trigger: AGTTCTGTGTCTCTTAGACCATGACCCCTTTTCACT...GGAAAGGAAGGAGACAGCCAAACTCTGACAAAGGCTTTTCCTTATAGAATAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| 3UTR-3UTR TCA 90 bp | GGTTATTCTATAAGGAAAAGCCTTTGTCAGAGTTTGGCTGTCTCCTTCCTTTCCTTTACAATTAAGTTGTaGTATCGGACTTGCGACGTG | + |
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Preference number: 2 (lower is better) Translates to: GYSIRKSLCQSLAVSFLSFTIKL*YRTCDV Trigger: CACGTCGCAAGTCCGATATCACAACTTAATTGTAAA...GGAAAGGAAGGAGACAGCCAAACTCTGACAAAGGCTTTTCCTTATAGAATAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| 3UTR-3UTR TCA 90 bp | GGTTATTCTATAAGGAAAAGCCTTTGTCAGAGTTTGGCTGTCTCCTTCCTTTCCTTTGTCAGGACCTTTTaGAGGAATGAAGGCTTATGT | + |
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Preference number: 2 (lower is better) Translates to: GYSIRKSLCQSLAVSFLSFVRTF*RNEGLC Trigger: ACATAAGCCTTCATTCCTTCAAAAGGTCCTGACAAA...GGAAAGGAAGGAGACAGCCAAACTCTGACAAAGGCTTTTCCTTATAGAATAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| 3UTR-3UTR GCA 90 bp | TTTGGGTTATTCTATAAGGAAAAGCCTTTGTCAGAGTTTGGCTGTCTCCTTCCTTTGTTCTCTCTGAACTaGCTAAGTAGGAAGCGGAAT | + |
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Preference number: 2 (lower is better) Translates to: FGLFYKEKPLSEFGCLLPLFSLN*LSRKRN Trigger: ATTCCGCTTCCTACTTAGGCAGTTCAGAGAGAACAA...AGGAAGGAGACAGCCAAACTCTGACAAAGGCTTTTCCTTATAGAATAACCCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| 3UTR-3UTR GCA 90 bp | TTTGGGTTATTCTATAAGGAAAAGCCTTTGTCAGAGTTTGGCTGTCTCCTTCCTTTCAAGTCCAATCTGTaGAGGGACCTATATAAGCAC | + |
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Preference number: 2 (lower is better) Translates to: FGLFYKEKPLSEFGCLLPFKSNL*RDLYKH Trigger: GTGCTTATATAGGTCCCTGCACAGATTGGACTTGAA...AGGAAGGAGACAGCCAAACTCTGACAAAGGCTTTTCCTTATAGAATAACCCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| 3UTR-3UTR CCA 90 bp | TTTGGGTTATTCTATAAGGAAAAGCCTTTGTCAGAGTTTGGCTGTCTCCTTCCTGAAAGGGTTAGTCTGTaGTCACTTAGAAACAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: FGLFYKEKPLSEFGCLLPERVSL*SLRNRS Trigger: GCTTCTGTTTCTAAGTGACCACAGACTAACCCTTTC...AGGAAGGAGACAGCCAAACTCTGACAAAGGCTTTTCCTTATAGAATAACCCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| 3UTR-3UTR CCA 90 bp | TTTGGGTTATTCTATAAGGAAAAGCCTTTGTCAGAGTTTGGCTGTCTCCTTCCTAGATGTGTGACTAAGTaGACAAAGAACTCAGCACTG | + |
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Preference number: 2 (lower is better) Translates to: FGLFYKEKPLSEFGCLLPRCVTK*TKNSAL Trigger: CAGTGCTGAGTTCTTTGTCCACTTAGTCACACATCT...AGGAAGGAGACAGCCAAACTCTGACAAAGGCTTTTCCTTATAGAATAACCCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| 3UTR CAA 90 bp | CACAGGATCTTCCACTTCCATGAAGTTGGTCTAAACATATGTTCTTaGGACTTAATTTTGGTTCAAGTCCAATCTGTGCAGGGACCTATA | + |
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Preference number: 2 (lower is better) Translates to: HRIFHFHEVGLNICS*DLILVQVQSVQGPI Trigger: TATAGGTCCCTGCACAGATTGGACTTGAACCAAAATTAAGTCCAAAGAACATATGTTTAGACCAACTTCATGGAAGTGGAAGATCCTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCCAGGCAGAATATCATCATTCATGTCTATACCCTGTCCTTTTTACTCCAATTACAGACATGAACAATaGACCGAGAATCTGGTATTA | + |
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Preference number: 2 (lower is better) Translates to: RPGRISSFMSIPCPFYSNYRHEQ*TENLVL Trigger: TAATACCAGATTCTCGGTGCATTGTTCATGTCTGTA...ATTGGAGTAAAAAGGACAGGGTATAGACATGAATGATGATATTCTGCCTGGCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| 3UTR-3UTR CCA 90 bp | GTTCAAGAGCACAGGATCTTCCACTTCCATGAAGTTGGTCTAAACATATGTTCTGTACTATCCTTGGCTTaGGGATTAAACCTATATAAC | + |
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Preference number: 2 (lower is better) Translates to: VQEHRIFHFHEVGLNICSVLSLA*GLNLYN Trigger: GTTATATAGGTTTAATCCCCAAGCCAAGGATAGTAC...AGAACATATGTTTAGACCAACTTCATGGAAGTGGAAGATCCTGTGCTCTTGAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| 3UTR-3UTR TCA 90 bp | TCATTCATGTCTATACCCTGTCCTTTTTACTCCAATATAAGAAAAGCAGGATACTTGCAGATACAGACATaGACAATGCACCGAGAATCT | + |
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Preference number: 2 (lower is better) Translates to: SFMSIPCPFYSNIRKAGYLQIQT*TMHRES Trigger: AGATTCTCGGTGCATTGTTCATGTCTGTATCTGCAA...GTATCCTGCTTTTCTTATATTGGAGTAAAAAGGACAGGGTATAGACATGAATGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| 3UTR CAA 90 bp | AAAGGGTTAGTCTGTGGTCACTTAGAAACAGAAGCCCTGCTAATATaGCTTGTGGATATCTACTGGGAATCTATTTTTGTACTAAATAAT | + |
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Preference number: 2 (lower is better) Translates to: KGLVCGHLETEALLI*LVDIYWESIFVLNN Trigger: ATTATTTAGTACAAAAATAGATTCCCAGTAGATATCCACAAGCAATATTAGCAGGGCTTCTGTTTCTAAGTGACCACAGACTAACCCTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| 3UTR-3UTR CCA 90 bp | TCATTCATGTCTATACCCTGTCCTTTTTACTCCAATATAAGAAAAGCAGGATACGGTATTATCAAGGACTaGGTTGTAAAGGCATCATTA | + |
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Preference number: 2 (lower is better) Translates to: SFMSIPCPFYSNIRKAGYGIIKD*VVKASL Trigger: TAATGATGCCTTTACAACCCAGTCCTTGATAATACC...GTATCCTGCTTTTCTTATATTGGAGTAAAAAGGACAGGGTATAGACATGAATGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| 3UTR TCA 72 bp | GAAGATTGCTTGAGGCCCGGGAGAACAGGGATTCAGTaGGCTGTGATTGCACTACTGCCCTCCAGCTTGTGC | + |
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Preference number: 3 (lower is better) Translates to: EDCLRPGRTGIQ*AVIALLPSSLC Trigger: GCACAAGCTGGAGGGCAGTAGTGCAATCACAGCTCACTGAATCCCTGTTCTCCCGGGCCTCAAGCAATCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381006.8 |
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| 3UTR-3UTR CAA 90 bp | TTTGGGTTATTCTATAAGGAAAAGCCTTTGTCAGAGTTTGGCTGTCTCCTTCCTGAAGCCCTGCTAATATaGCTTGTGGATATCTACTGG | + |
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Preference number: 3 (lower is better) Translates to: FGLFYKEKPLSEFGCLLPEALLI*LVDIYW Trigger: CCAGTAGATATCCACAAGCAATATTAGCAGGGCTTC...AGGAAGGAGACAGCCAAACTCTGACAAAGGCTTTTCCTTATAGAATAACCCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| 3UTR-3UTR CAA 90 bp | TCATTCATGTCTATACCCTGTCCTTTTTACTCCAATATAAGAAAAGCAGGATACGTTGTGATATCGGACTaGCGACGTGACCAACTTAAA | + |
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Preference number: 3 (lower is better) Translates to: SFMSIPCPFYSNIRKAGYVVISD*RRDQLK Trigger: TTTAAGTTGGTCACGTCGCAAGTCCGATATCACAAC...GTATCCTGCTTTTCTTATATTGGAGTAAAAAGGACAGGGTATAGACATGAATGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| 3UTR-3UTR CAA 90 bp | GTTCAAGAGCACAGGATCTTCCACTTCCATGAAGTTGGTCTAAACATATGTTCTAAGTTGCAAGCAATCTaGGTTACTGAGAATAGAAGT | + |
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Preference number: 3 (lower is better) Translates to: VQEHRIFHFHEVGLNICSKLQAI*VTENRS Trigger: ACTTCTATTCTCAGTAACCAAGATTGCTTGCAACTT...AGAACATATGTTTAGACCAACTTCATGGAAGTGGAAGATCCTGTGCTCTTGAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| 3UTR-3UTR CAA 90 bp | TTTGGGTTATTCTATAAGGAAAAGCCTTTGTCAGAGTTTGGCTGTCTCCTTCCTGTACTGCATCATTTTTaGTTAATAGGAGAGGAGTGT | + |
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Preference number: 3 (lower is better) Translates to: FGLFYKEKPLSEFGCLLPVLHHF*LIGEEC Trigger: ACACTCCTCTCCTATTAACAAAAAATGATGCAGTAC...AGGAAGGAGACAGCCAAACTCTGACAAAGGCTTTTCCTTATAGAATAACCCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| 3UTR-3UTR CAA 90 bp | TTTGGGTTATTCTATAAGGAAAAGCCTTTGTCAGAGTTTGGCTGTCTCCTTCCTAAAAACCCAAGTATTTaGTCAGGACCTTTTGAAGGA | + |
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Preference number: 3 (lower is better) Translates to: FGLFYKEKPLSEFGCLLPKNPSI*SGPFEG Trigger: TCCTTCAAAAGGTCCTGACAAAATACTTGGGTTTTT...AGGAAGGAGACAGCCAAACTCTGACAAAGGCTTTTCCTTATAGAATAACCCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| 3UTR-3UTR CAA 90 bp | TTTGGGTTATTCTATAAGGAAAAGCCTTTGTCAGAGTTTGGCTGTCTCCTTCCTTCTTTGGACTTAATTTaGGTTCAAGTCCAATCTGTG | + |
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Preference number: 3 (lower is better) Translates to: FGLFYKEKPLSEFGCLLPSLDLI*VQVQSV Trigger: CACAGATTGGACTTGAACCAAAATTAAGTCCAAAGA...AGGAAGGAGACAGCCAAACTCTGACAAAGGCTTTTCCTTATAGAATAACCCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| 3UTR TCA 72 bp | AAAATAAGTTCAAGAGCACAGGATCTTCCACTTCCATaGAGTTGGTCTAAACATATGTTCTTTGGACTTAAT | + |
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Preference number: 3 (lower is better) Translates to: KISSRAQDLPLP*SWSKHMFFGLN Trigger: ATTAAGTCCAAAGAACATATGTTTAGACCAACTTCATGGAAGTGGAAGATCCTGTGCTCTTGAACTTATTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| CDS-3UTR TCA 90 bp | GTGCCTCTATATCCCCTAGCATCCAAGTATTCAAAGACTTCAGTGATGAACAATCAGGAAGGGCAGCGGTaGGCCGGGGGACGGCGGGGT | + |
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Preference number: 4 (lower is better) Translates to: VPLYPLASKYSKTSVMNNQEGQR*AGGRRG Trigger: ACCCCGCCGTCCCCCGGCTCACCGCTGCCCTTCCTG...ATTGTTCATCACTGAAGTCTTTGAATACTTGGATGCTAGGGGATATAGAGGCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000417478.6 |
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| CDS-3UTR TCA 90 bp | GCAGAGGTAGAAGATGACAAACATGAGGAGGGTTTCCCCAGGCGTCCACATTATCCATGGCAGCCTGTGTaGTCTTGTCAGTGGTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: AEVEDDKHEEGFPRRPHYPWQPV*SCQWWG Trigger: CCCCCACCACTGACAAGATCACACAGGCTGCCATGG...ATAATGTGGACGCCTGGGGAAACCCTCCTCATGTTTGTCATCTTCTACCTCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| CDS-3UTR GCA 90 bp | AGTCCTTCCATGCTTTTAAGTATCCTTCCTCTAACACATGACTCTGACATGGATGATGGTGCTTGCCGCTaGCGCTGCTGCCGCCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: SPSMLLSILPLTHDSDMDDGACR*RCCRRR Trigger: GCGGCGGCGGCAGCAGCGGCAGCGGCAAGCACCATC...ATCCATGTCAGAGTCATGTGTTAGAGGAAGGATACTTAAAAGCATGGAAGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417478.6 |
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| CDS-3UTR CCA 90 bp | AGTCCTTCCATGCTTTTAAGTATCCTTCCTCTAACACATGACTCTGACATGGATATTCGCGCCCGGGCCTaGGCGGGGGAGCAGAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: SPSMLLSILPLTHDSDMDIRARA*AGEQRV Trigger: GACCCTCTGCTCCCCCGCCCAGGCCCGGGCGCGAAT...ATCCATGTCAGAGTCATGTGTTAGAGGAAGGATACTTAAAAGCATGGAAGGACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000417478.6 |
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| CDS-3UTR CCA 90 bp | TTTGCCGAATGTACAGCACATTCTTTTCACTTCAGCACTGACAATCCAAAGTGTTTTCGGCACCAGCGGTaGGCGGCGGCGGGGTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: FAECTAHSFHFSTDNPKCFRHQR*AAAGSQ Trigger: CTGAGACCCCGCCGCCGCCCACCGCTGGTGCCGAAA...ACACTTTGGATTGTCAGTGCTGAAGTGAAAAGAATGTGCTGTACATTCGGCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000417478.6 |
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| CDS-3UTR GCA 90 bp | TTGCCGAATGTACAGCACATTCTTTTCACTTCAGCACTGACAATCCAAAGTGTTTCGCCGGCTCCTCGCTaGAACTTTCGGCACCAGCGG | + |
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Preference number: 4 (lower is better) Translates to: LPNVQHILFTSALTIQSVSPAPR*NFRHQR Trigger: CCGCTGGTGCCGAAAGTTGCAGCGAGGAGCCGGCGA...AACACTTTGGATTGTCAGTGCTGAAGTGAAAAGAATGTGCTGTACATTCGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417478.6 |
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| CDS-3UTR GCA 90 bp | GCAGAGGTAGAAGATGACAAACATGAGGAGGGTTTCCCCAGGCGTCCACATTATATCACTTCCAGGATCTaGTCAGATGAGCTGGGATGC | + |
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Preference number: 4 (lower is better) Translates to: AEVEDDKHEEGFPRRPHYITSRI*SDELGC Trigger: GCATCCCAGCTCATCTGAGCAGATCCTGGAAGTGAT...ATAATGTGGACGCCTGGGGAAACCCTCCTCATGTTTGTCATCTTCTACCTCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| CDS-3UTR GCA 90 bp | GTGCCTCTATATCCCCTAGCATCCAAGTATTCAAAGACTTCAGTGATGAACAATGCGGGGTCTCAGCCATaGTCACTCCTTCCTTCGCCG | + |
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Preference number: 4 (lower is better) Translates to: VPLYPLASKYSKTSVMNNAGSQP*SLLPSP Trigger: CGGCGAAGGAAGGAGTGAGCATGGCTGAGACCCCGC...ATTGTTCATCACTGAAGTCTTTGAATACTTGGATGCTAGGGGATATAGAGGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417478.6 |
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| CDS-3UTR TCA 90 bp | TTCTCTCTGAACTGCCTAAGTAGGAAGCGGAATTGCAGGAAAACGGCAGAGGTATCTCCTGCCTCATGCTaGTCTGCATCTCCAGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: FSLNCLSRKRNCRKTAEVSPASC*SASPVL Trigger: AAGAACTGGAGATGCAGATCAGCATGAGGCAGGAGA...TACCTCTGCCGTTTTCCTGCAATTCCGCTTCCTACTTAGGCAGTTCAGAGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| CDS-3UTR CCA 90 bp | GTTCAAGAGCACAGGATCTTCCACTTCCATGAAGTTGGTCTAAACATATGTTCTGTCAGTGGTGGGGGTTaGCATATCGGTCGGAGGCGT | + |
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Preference number: 4 (lower is better) Translates to: VQEHRIFHFHEVGLNICSVSGGG*HIGRRR Trigger: ACGCCTCCGACCGATATGCCAACCCCCACCACTGAC...AGAACATATGTTTAGACCAACTTCATGGAAGTGGAAGATCCTGTGCTCTTGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| CDS-3UTR CCA 90 bp | GCAGAGGTAGAAGATGACAAACATGAGGAGGGTTTCCCCAGGCGTCCACATTATTTCATCACACTGCAATaGCAGAACAGGCTTGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: AEVEDDKHEEGFPRRPHYFITLQ*QNRLAD Trigger: ATCTGCAAGCCTGTTCTGCCATTGCAGTGTGATGAA...ATAATGTGGACGCCTGGGGAAACCCTCCTCATGTTTGTCATCTTCTACCTCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| CDS-3UTR TCA 90 bp | GCAGAGGTAGAAGATGACAAACATGAGGAGGGTTTCCCCAGGCGTCCACATTATAATCTGGCCTCGATATaGGTAAGTGAAAAATCCTCC | + |
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Preference number: 4 (lower is better) Translates to: AEVEDDKHEEGFPRRPHYNLASI*VSEKSS Trigger: GGAGGATTTTTCACTTACTCATATCGAGGCCAGATT...ATAATGTGGACGCCTGGGGAAACCCTCCTCATGTTTGTCATCTTCTACCTCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| CDS-3UTR TCA 90 bp | TTCTCTCTGAACTGCCTAAGTAGGAAGCGGAATTGCAGGAAAACGGCAGAGGTAAGAATTGCAGTAATCTaGCCGTCTCCTTCAGTACCT | + |
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Preference number: 4 (lower is better) Translates to: FSLNCLSRKRNCRKTAEVRIAVI*PSPSVP Trigger: AGGTACTGAAGGAGACGGTCAGATTACTGCAATTCT...TACCTCTGCCGTTTTCCTGCAATTCCGCTTCCTACTTAGGCAGTTCAGAGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| CDS-3UTR GCA 90 bp | GCAGAGGTAGAAGATGACAAACATGAGGAGGGTTTCCCCAGGCGTCCACATTATCCAAAGCAGCTGAAATaGTGCAAAGCATACCAGAAT | + |
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Preference number: 4 (lower is better) Translates to: AEVEDDKHEEGFPRRPHYPKQLK*CKAYQN Trigger: ATTCTGGTATGCTTTGCAGCATTTCAGCTGCTTTGG...ATAATGTGGACGCCTGGGGAAACCCTCCTCATGTTTGTCATCTTCTACCTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| CDS-3UTR CCA 90 bp | GCAGAGGTAGAAGATGACAAACATGAGGAGGGTTTCCCCAGGCGTCCACATTATAATGCACCGAGAATCTaGTATTATCAAGGACTGGGT | + |
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Preference number: 4 (lower is better) Translates to: AEVEDDKHEEGFPRRPHYNAPRI*YYQGLG Trigger: ACCCAGTCCTTGATAATACCAGATTCTCGGTGCATT...ATAATGTGGACGCCTGGGGAAACCCTCCTCATGTTTGTCATCTTCTACCTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| CDS-3UTR CCA 90 bp | GCAGAGGTAGAAGATGACAAACATGAGGAGGGTTTCCCCAGGCGTCCACATTATAGATGTGTGACTAAGTaGACAAAGAACTCAGCACTG | + |
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Preference number: 4 (lower is better) Translates to: AEVEDDKHEEGFPRRPHYRCVTK*TKNSAL Trigger: CAGTGCTGAGTTCTTTGTCCACTTAGTCACACATCT...ATAATGTGGACGCCTGGGGAAACCCTCCTCATGTTTGTCATCTTCTACCTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| CDS-3UTR TCA 90 bp | AGGCCAGGCAGAATATCATCATTCATGTCTATACCCTGTCCTTTTTACTCCAATCAGGATCTGCTCAGATaGGCTGGGATGCTGAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RPGRISSFMSIPCPFYSNQDLLR*AGMLSS Trigger: AGAACTCAGCATCCCAGCTCATCTGAGCAGATCCTG...ATTGGAGTAAAAAGGACAGGGTATAGACATGAATGATGATATTCTGCCTGGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000226328.8 |
||
| CDS-3UTR TCA 90 bp | GCAGAGGTAGAAGATGACAAACATGAGGAGGGTTTCCCCAGGCGTCCACATTATCTCGATATGAGTAAGTaGAAAATCCTCCTCCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AEVEDDKHEEGFPRRPHYLDMSK*KILLLC Trigger: ACAAAGGAGGAGGATTTTTCACTTACTCATATCGAG...ATAATGTGGACGCCTGGGGAAACCCTCCTCATGTTTGTCATCTTCTACCTCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000226328.8 |
||
| CDS-3UTR GCA 90 bp | GCAGAGGTAGAAGATGACAAACATGAGGAGGGTTTCCCCAGGCGTCCACATTATAAGATCTTTAACACTTaGTGTTATCTCTGCGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AEVEDDKHEEGFPRRPHYKIFNT*CYLCGF Trigger: GAAGCCGCAGAGATAACAGCAAGTGTTAAAGATCTT...ATAATGTGGACGCCTGGGGAAACCCTCCTCATGTTTGTCATCTTCTACCTCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000226328.8 |
||
| CDS-3UTR TCA 90 bp | TTGCCGAATGTACAGCACATTCTTTTCACTTCAGCACTGACAATCCAAAGTGTTTCTCCTGCCTCATGCTaGTCTGCATCTCCAGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LPNVQHILFTSALTIQSVSPASC*SASPVL Trigger: AAGAACTGGAGATGCAGATCAGCATGAGGCAGGAGA...AACACTTTGGATTGTCAGTGCTGAAGTGAAAAGAATGTGCTGTACATTCGGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417478.6 |
||
| CDS-3UTR GCA 90 bp | GTTCAAGAGCACAGGATCTTCCACTTCCATGAAGTTGGTCTAAACATATGTTCTGCCAATTCCATCTCCTaGCTCATGCTGATCTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: VQEHRIFHFHEVGLNICSANSIS*LMLICI Trigger: GATGCAGATCAGCATGAGGCAGGAGATGGAATTGGC...AGAACATATGTTTAGACCAACTTCATGGAAGTGGAAGATCCTGTGCTCTTGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000226328.8 |
||
| 3UTR CAA 72 bp | CACCTAGGCTTTGGGTTATTCTATAAGGAAAAGCCTTaGTCAGAGTTTGGCTGTCTCCTTCCTTTCCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: HLGFGLFYKEKP*SEFGCLLPFPF Trigger: GAATGGGAAAGGAAGGAGACAGCCAAACTCTGACAAAGGCTTTTCCTTATAGAATAACCCAAAGCCTAGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000226328.8 |
||
| CDS-3UTR GCA 90 bp | TTTGGGTTATTCTATAAGGAAAAGCCTTTGTCAGAGTTTGGCTGTCTCCTTCCTCTAGGTTCATCACACTaGAATGGCAGAACAGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FGLFYKEKPLSEFGCLLPLGSSH*NGRTGL Trigger: CAAGCCTGTTCTGCCATTGCAGTGTGATGAACCTAG...AGGAAGGAGACAGCCAAACTCTGACAAAGGCTTTTCCTTATAGAATAACCCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000226328.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCAGGCAGAATATCATCATTCATGTCTATACCCTGTCCTTTTTACTCCAATATTTGCAAAGGTAGATaGTCTCCATGGCAGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RPGRISSFMSIPCPFYSNICKGR*SPWQPV Trigger: CACAGGCTGCCATGGAGACCATCTACCTTTGCAAAT...ATTGGAGTAAAAAGGACAGGGTATAGACATGAATGATGATATTCTGCCTGGCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000226328.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCTCTGAACTGCCTAAGTAGGAAGCGGAATTGCAGGAAAACGGCAGAGGTATGCCTAATGATGTTTTaGGATCAGTTTATTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FSLNCLSRKRNCRKTAEVCLMMF*DQFICC Trigger: GCAGCAAATAAACTGATCCCAAAACATCATTAGGCA...TACCTCTGCCGTTTTCCTGCAATTCCGCTTCCTACTTAGGCAGTTCAGAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000226328.8 |
||
| CDS-3UTR TCA 90 bp | TCATTCATGTCTATACCCTGTCCTTTTTACTCCAATATAAGAAAAGCAGGATACTGGGTCAGGTGTAAGTaGGATGTCATCCAGCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SFMSIPCPFYSNIRKAGYWVRCK*DVIQLS Trigger: CGAGAGCTGGATGACATCTCACTTACACCTGACCCA...GTATCCTGCTTTTCTTATATTGGAGTAAAAAGGACAGGGTATAGACATGAATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000226328.8 |
||
| CDS-3UTR TCA 90 bp | AGGCCAGGCAGAATATCATCATTCATGTCTATACCCTGTCCTTTTTACTCCAATTCTATAACTCCAACCTaGGAGTCCAAGTCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RPGRISSFMSIPCPFYSNSITPT*ESKSSP Trigger: AGGAGAAGACTTGGACTCTCAGGTTGGAGTTATAGA...ATTGGAGTAAAAAGGACAGGGTATAGACATGAATGATGATATTCTGCCTGGCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000226328.8 |
||
| CDS-3UTR TCA 90 bp | AGTCCTTCCATGCTTTTAAGTATCCTTCCTCTAACACATGACTCTGACATGGATTCTATAACTCCAACCTaGGAGTCCAAGTCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SPSMLLSILPLTHDSDMDSITPT*ESKSSP Trigger: AGGAGAAGACTTGGACTCTCAGGTTGGAGTTATAGA...ATCCATGTCAGAGTCATGTGTTAGAGGAAGGATACTTAAAAGCATGGAAGGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417478.6 |
||
| CDS-3UTR GCA 90 bp | TTTGGGTTATTCTATAAGGAAAAGCCTTTGTCAGAGTTTGGCTGTCTCCTTCCTACTTGCTGTTATCTCTaGGGCTTCTGGAACAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FGLFYKEKPLSEFGCLLPTCCYL*GFWNKL Trigger: AAGCTTGTTCCAGAAGCCGCAGAGATAACAGCAAGT...AGGAAGGAGACAGCCAAACTCTGACAAAGGCTTTTCCTTATAGAATAACCCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000226328.8 |
||
| CDS-3UTR GCA 90 bp | AGTCCTTCCATGCTTTTAAGTATCCTTCCTCTAACACATGACTCTGACATGGATACTTGCTGTTATCTCTaGGGCTTCTGGAACAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SPSMLLSILPLTHDSDMDTCCYL*GFWNKL Trigger: AAGCTTGTTCCAGAAGCCGCAGAGATAACAGCAAGT...ATCCATGTCAGAGTCATGTGTTAGAGGAAGGATACTTAAAAGCATGGAAGGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417478.6 |
||
| CDS-3UTR GCA 90 bp | GTTCAAGAGCACAGGATCTTCCACTTCCATGAAGTTGGTCTAAACATATGTTCTCCTGTTGTTTGCAACTaGAAGCTCCTCTGTCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VQEHRIFHFHEVGLNICSPVVCN*KLLCQF Trigger: AAACTGACAGAGGAGCTTGCAGTTGCAAACAACAGG...AGAACATATGTTTAGACCAACTTCATGGAAGTGGAAGATCCTGTGCTCTTGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000226328.8 |
||
| CDS-3UTR GCA 90 bp | TTGCCGAATGTACAGCACATTCTTTTCACTTCAGCACTGACAATCCAAAGTGTTCCTGTTGTTTGCAACTaGAAGCTCCTCTGTCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LPNVQHILFTSALTIQSVPVVCN*KLLCQF Trigger: AAACTGACAGAGGAGCTTGCAGTTGCAAACAACAGG...AACACTTTGGATTGTCAGTGCTGAAGTGAAAAGAATGTGCTGTACATTCGGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417478.6 |
||
| CDS-3UTR GCA 90 bp | AGGCCAGGCAGAATATCATCATTCATGTCTATACCCTGTCCTTTTTACTCCAATTGCCTCATGCTGATCTaGATCTCCAGTTCTTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RPGRISSFMSIPCPFYSNCLMLI*ISSSFS Trigger: TGAGAAAGAACTGGAGATGCAGATCAGCATGAGGCA...ATTGGAGTAAAAAGGACAGGGTATAGACATGAATGATGATATTCTGCCTGGCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000226328.8 |
||
| CDS-3UTR GCA 90 bp | TTTGCCGAATGTACAGCACATTCTTTTCACTTCAGCACTGACAATCCAAAGTGTTGCCTCATGCTGATCTaGATCTCCAGTTCTTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FAECTAHSFHFSTDNPKCCLMLI*ISSSFS Trigger: TGAGAAAGAACTGGAGATGCAGATCAGCATGAGGCA...ACACTTTGGATTGTCAGTGCTGAAGTGAAAAGAATGTGCTGTACATTCGGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417478.6 |
||
| CDS-3UTR GCA 90 bp | CCTCTATATCCCCTAGCATCCAAGTATTCAAAGACTTCAGTGATGAACAATAAAGCCAATTCCATCTCCTaGCTCATGCTGATCTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: PLYPLASKYSKTSVMNNKANSIS*LMLICI Trigger: GATGCAGATCAGCATGAGGCAGGAGATGGAATTGGC...TTTATTGTTCATCACTGAAGTCTTTGAATACTTGGATGCTAGGGGATATAGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417478.6 |
||
| CDS-3UTR CCA 90 bp | TTTGGGTTATTCTATAAGGAAAAGCCTTTGTCAGAGTTTGGCTGTCTCCTTCCTTCTTCCTCTACCTACTaGTGTCTTAAGTCCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FGLFYKEKPLSEFGCLLPSSSTY*CLKSWK Trigger: CTTCCAGGACTTAAGACACCAGTAGGTAGAGGAAGA...AGGAAGGAGACAGCCAAACTCTGACAAAGGCTTTTCCTTATAGAATAACCCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000226328.8 |
||
| CDS-3UTR CCA 90 bp | TTTGCCGAATGTACAGCACATTCTTTTCACTTCAGCACTGACAATCCAAAGTGTTCTTCCTCTACCTACTaGTGTCTTAAGTCCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FAECTAHSFHFSTDNPKCSSSTY*CLKSWK Trigger: CTTCCAGGACTTAAGACACCAGTAGGTAGAGGAAGA...ACACTTTGGATTGTCAGTGCTGAAGTGAAAAGAATGTGCTGTACATTCGGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417478.6 |
||
| CDS-3UTR TCA 90 bp | TTTGGGTTATTCTATAAGGAAAAGCCTTTGTCAGAGTTTGGCTGTCTCCTTCCTCATAGCAAAATAAGATaGTGCTTGTCTTCTCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FGLFYKEKPLSEFGCLLPHSKIR*CLSSPS Trigger: GCTGGGAGAAGACAAGCATCATCTTATTTTGCTATG...AGGAAGGAGACAGCCAAACTCTGACAAAGGCTTTTCCTTATAGAATAACCCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000226328.8 |
||
| CDS-3UTR TCA 90 bp | AGGCCAGGCAGAATATCATCATTCATGTCTATACCCTGTCCTTTTTACTCCAATCCCACAAAAGATGTGTaGCTAAGTGGACAAAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: RPGRISSFMSIPCPFYSNPTKDV*LSGQRT Trigger: AGTTCTTTGTCCACTTAGTCACACATCTTTTGTGGG...ATTGGAGTAAAAAGGACAGGGTATAGACATGAATGATGATATTCTGCCTGGCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000226328.8 |
||
| CDS-3UTR GCA 90 bp | TTGCCGAATGTACAGCACATTCTTTTCACTTCAGCACTGACAATCCAAAGTGTTCCTAAGTCTGAACTCTaGAGCTTAAAGGCAAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LPNVQHILFTSALTIQSVPKSEL*SLKASS Trigger: TGAACTTGCCTTTAAGCTGCAGAGTTCAGACTTAGG...AACACTTTGGATTGTCAGTGCTGAAGTGAAAAGAATGTGCTGTACATTCGGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417478.6 |
||
| CDS-3UTR GCA 90 bp | GTTCAAGAGCACAGGATCTTCCACTTCCATGAAGTTGGTCTAAACATATGTTCTATGGCAGAACAGGCTTaGAGATACAGACATGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: VQEHRIFHFHEVGLNICSMAEQA*RYRHEQ Trigger: TTGTTCATGTCTGTATCTGCAAGCCTGTTCTGCCAT...AGAACATATGTTTAGACCAACTTCATGGAAGTGGAAGATCCTGTGCTCTTGAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000226328.8 |
||
| CDS-3UTR GCA 90 bp | AGGCCAGGCAGAATATCATCATTCATGTCTATACCCTGTCCTTTTTACTCCAATTTCAAGTCCAATCTGTaGAGGGACCTATATAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RPGRISSFMSIPCPFYSNFKSNL*RDLYKH Trigger: GTGCTTATATAGGTCCCTGCACAGATTGGACTTGAA...ATTGGAGTAAAAAGGACAGGGTATAGACATGAATGATGATATTCTGCCTGGCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000226328.8 |
||
| CDS-3UTR CCA 90 bp | GGTTATTCTATAAGGAAAAGCCTTTGTCAGAGTTTGGCTGTCTCCTTCCTTTCCTGGTGTCTTAAGTCCTaGAAGATCTTTAACACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GYSIRKSLCQSLAVSFLSWCLKS*KIFNTC Trigger: GCAAGTGTTAAAGATCTTCCAGGACTTAAGACACCA...GGAAAGGAAGGAGACAGCCAAACTCTGACAAAGGCTTTTCCTTATAGAATAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000226328.8 |
||
| CDS-3UTR CCA 90 bp | TTTGGGTTATTCTATAAGGAAAAGCCTTTGTCAGAGTTTGGCTGTCTCCTTCCTAGTGAAAAGGGGTCATaGTCTAAGAGACACAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: FGLFYKEKPLSEFGCLLPSEKGS*SKRHRT Trigger: AGTTCTGTGTCTCTTAGACCATGACCCCTTTTCACT...AGGAAGGAGACAGCCAAACTCTGACAAAGGCTTTTCCTTATAGAATAACCCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000226328.8 |
||
| CDS-3UTR TCA 90 bp | CCTCTATATCCCCTAGCATCCAAGTATTCAAAGACTTCAGTGATGAACAATAAAAGAATTGCAGTAATCTaGCCGTCTCCTTCAGTACCT | + |
|
Preference number: 4 (lower is better) Translates to: PLYPLASKYSKTSVMNNKRIAVI*PSPSVP Trigger: AGGTACTGAAGGAGACGGTCAGATTACTGCAATTCT...TTTATTGTTCATCACTGAAGTCTTTGAATACTTGGATGCTAGGGGATATAGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417478.6 |
||
| CDS-3UTR GCA 90 bp | TTTGCCGAATGTACAGCACATTCTTTTCACTTCAGCACTGACAATCCAAAGTGTAAGATCTTTAACACTTaGTGTTATCTCTGCGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FAECTAHSFHFSTDNPKCKIFNT*CYLCGF Trigger: GAAGCCGCAGAGATAACAGCAAGTGTTAAAGATCTT...ACACTTTGGATTGTCAGTGCTGAAGTGAAAAGAATGTGCTGTACATTCGGCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417478.6 |
||
| CDS-3UTR GCA 90 bp | GGTTATTCTATAAGGAAAAGCCTTTGTCAGAGTTTGGCTGTCTCCTTCCTTTCCTACAGACATGAACAATaGACCGAGAATCTGGTATTA | + |
|
Preference number: 4 (lower is better) Translates to: GYSIRKSLCQSLAVSFLSYRHEQ*TENLVL Trigger: TAATACCAGATTCTCGGTGCATTGTTCATGTCTGTA...GGAAAGGAAGGAGACAGCCAAACTCTGACAAAGGCTTTTCCTTATAGAATAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000226328.8 |
||
| CDS-3UTR CCA 90 bp | TTTGCCGAATGTACAGCACATTCTTTTCACTTCAGCACTGACAATCCAAAGTGTTGGTGTCTTAAGTCCTaGAAGATCTTTAACACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FAECTAHSFHFSTDNPKCWCLKS*KIFNTC Trigger: GCAAGTGTTAAAGATCTTCCAGGACTTAAGACACCA...ACACTTTGGATTGTCAGTGCTGAAGTGAAAAGAATGTGCTGTACATTCGGCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417478.6 |
||
| CDS-3UTR CCA 90 bp | GGTTATTCTATAAGGAAAAGCCTTTGTCAGAGTTTGGCTGTCTCCTTCCTTTCCGTACTATCCTTGGCTTaGGGATTAAACCTATATAAC | + |
|
Preference number: 4 (lower is better) Translates to: GYSIRKSLCQSLAVSFLSVLSLA*GLNLYN Trigger: GTTATATAGGTTTAATCCCCAAGCCAAGGATAGTAC...GGAAAGGAAGGAGACAGCCAAACTCTGACAAAGGCTTTTCCTTATAGAATAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000226328.8 |
||
| CDS-3UTR TCA 90 bp | GTTCAAGAGCACAGGATCTTCCACTTCCATGAAGTTGGTCTAAACATATGTTCTTTCAATTTCGGTATTTaGTCACTCCTTCCAAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: VQEHRIFHFHEVGLNICSFNFGI*SLLPNA Trigger: AGCATTTGGAAGGAGTGATCAAATACCGAAATTGAA...AGAACATATGTTTAGACCAACTTCATGGAAGTGGAAGATCCTGTGCTCTTGAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000226328.8 |
||
| CDS-3UTR TCA 90 bp | GTGCCTCTATATCCCCTAGCATCCAAGTATTCAAAGACTTCAGTGATGAACAATTTTTCACTTCAGCACTaGCAATCCAAAGTGTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VPLYPLASKYSKTSVMNNFSLQH*QSKVFH Trigger: ATGAAACACTTTGGATTGTCAGTGCTGAAGTGAAAA...ATTGTTCATCACTGAAGTCTTTGAATACTTGGATGCTAGGGGATATAGAGGCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000417478.6 |
||
| CDS-3UTR CCA 90 bp | TCATTCATGTCTATACCCTGTCCTTTTTACTCCAATATAAGAAAAGCAGGATACGCCATTCTCCATCCATaGACACTCGGAATTTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SFMSIPCPFYSNIRKAGYAILHP*TLGICK Trigger: TTTGCAAATTCCGAGTGTCCATGGATGGAGAATGGC...GTATCCTGCTTTTCTTATATTGGAGTAAAAAGGACAGGGTATAGACATGAATGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000226328.8 |
||
| CDS-3UTR CCA 90 bp | TTTGGGTTATTCTATAAGGAAAAGCCTTTGTCAGAGTTTGGCTGTCTCCTTCCTGGTATTATCAAGGACTaGGTTGTAAAGGCATCATTA | + |
|
Preference number: 4 (lower is better) Translates to: FGLFYKEKPLSEFGCLLPGIIKD*VVKASL Trigger: TAATGATGCCTTTACAACCCAGTCCTTGATAATACC...AGGAAGGAGACAGCCAAACTCTGACAAAGGCTTTTCCTTATAGAATAACCCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000226328.8 |
||
| CDS-3UTR CCA 90 bp | GGTTATTCTATAAGGAAAAGCCTTTGTCAGAGTTTGGCTGTCTCCTTCCTTTCCACTGGAACTTGTAAATaGGCAACTACCTTCTTATAT | + |
|
Preference number: 4 (lower is better) Translates to: GYSIRKSLCQSLAVSFLSTGTCK*ATTFLY Trigger: ATATAAGAAGGTAGTTGCCCATTTACAAGTTCCAGT...GGAAAGGAAGGAGACAGCCAAACTCTGACAAAGGCTTTTCCTTATAGAATAACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000226328.8 |
||
| CDS-3UTR GCA 90 bp | TCATTCATGTCTATACCCTGTCCTTTTTACTCCAATATAAGAAAAGCAGGATACCCTAAGTCTGAACTCTaGAGCTTAAAGGCAAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SFMSIPCPFYSNIRKAGYPKSEL*SLKASS Trigger: TGAACTTGCCTTTAAGCTGCAGAGTTCAGACTTAGG...GTATCCTGCTTTTCTTATATTGGAGTAAAAAGGACAGGGTATAGACATGAATGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000226328.8 |
||
| CDS-3UTR GCA 90 bp | TCATTCATGTCTATACCCTGTCCTTTTTACTCCAATATAAGAAAAGCAGGATACTTGTTCTCTCTGAACTaGCTAAGTAGGAAGCGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SFMSIPCPFYSNIRKAGYLFSLN*LSRKRN Trigger: ATTCCGCTTCCTACTTAGGCAGTTCAGAGAGAACAA...GTATCCTGCTTTTCTTATATTGGAGTAAAAAGGACAGGGTATAGACATGAATGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000226328.8 |
||
| CDS-3UTR CCA 90 bp | TCATTCATGTCTATACCCTGTCCTTTTTACTCCAATATAAGAAAAGCAGGATACGAAAGGGTTAGTCTGTaGTCACTTAGAAACAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SFMSIPCPFYSNIRKAGYERVSL*SLRNRS Trigger: GCTTCTGTTTCTAAGTGACCACAGACTAACCCTTTC...GTATCCTGCTTTTCTTATATTGGAGTAAAAAGGACAGGGTATAGACATGAATGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000226328.8 |
||
| CDS GCA 90 bp | TGCAACTTTCGGCACCAGCGGTGGGCGGCGGCGGGGTCTCAGCCATaGTCACTCCTTCCTTCGCCGCAGCCTCCGATTCGCGCCCGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CNFRHQRWAAAGSQP*SLLPSPQPPIRARA Trigger: GGCCCGGGCGCGAATCGGAGGCTGCGGCGAAGGAAGGAGTGAGCATGGCTGAGACCCCGCCGCCGCCCACCGCTGGTGCCGAAAGTTGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417478.6 ENST00000514898.1 |
||
| CDS-3UTR CAA 90 bp | GCAGAGGTAGAAGATGACAAACATGAGGAGGGTTTCCCCAGGCGTCCACATTATGCAGCCTGTGTGATCTaGTCAGTGGTGGGGGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: AEVEDDKHEEGFPRRPHYAACVI*SVVGVG Trigger: GCCAACCCCCACCACTGACAAGATCACACAGGCTGC...ATAATGTGGACGCCTGGGGAAACCCTCCTCATGTTTGTCATCTTCTACCTCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000226328.8 |
||
| CDS TCA 90 bp | GCTGCAGAAATCACTTCCAGGATCTGCTCAGATGAGCTGGGATGCTaGGTTCTCATAGGATTGGCCGTGCGCAGTAAGCAGGGTGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: AAEITSRICSDELGC*VLIGLAVRSKQGVD Trigger: GTCAACACCCTGCTTACTGCGCACGGCCAATCCTATGAGAACTCAGCATCCCAGCTCATCTGAGCAGATCCTGGAAGTGATTTCTGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381006.8 |
||
| CDS CCA 90 bp | GTGAGATGTCATCCAGCTCTCGCAGGCAGAGCCATTCTCCATCCATaGACACTCGGAATTTGCAAAGGTAGATGGTCTCCATGGCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: VRCHPALAGRAILHP*TLGICKGRWSPWQP Trigger: AGGCTGCCATGGAGACCATCTACCTTTGCAAATTCCGAGTGTCCATGGATGGAGAATGGCTCTGCCTGCGAGAGCTGGATGACATCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000226328.8 ENST00000381006.8 |
||
| CDS-3UTR CAA 90 bp | AGGCCAGGCAGAATATCATCATTCATGTCTATACCCTGTCCTTTTTACTCCAATTGTCAGTGGTGGGGGTaGGCATATCGGTCGGAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: RPGRISSFMSIPCPFYSNCQWWG*AYRSEA Trigger: CGCCTCCGACCGATATGCCAACCCCCACCACTGACA...ATTGGAGTAAAAAGGACAGGGTATAGACATGAATGATGATATTCTGCCTGGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| CDS-3UTR CAA 90 bp | GCAGAGGTAGAAGATGACAAACATGAGGAGGGTTTCCCCAGGCGTCCACATTATAGCCTTTGTCAGAGTTaGGCTGTCTCCTTCCTTTCC | + |
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Preference number: 5 (lower is better) Translates to: AEVEDDKHEEGFPRRPHYSLCQS*AVSFLS Trigger: GGAAAGGAAGGAGACAGCCAAACTCTGACAAAGGCT...ATAATGTGGACGCCTGGGGAAACCCTCCTCATGTTTGTCATCTTCTACCTCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| CDS-3UTR CAA 90 bp | TTCTCTCTGAACTGCCTAAGTAGGAAGCGGAATTGCAGGAAAACGGCAGAGGTAGTTGTGATATCGGACTaGCGACGTGACCAACTTAAA | + |
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Preference number: 5 (lower is better) Translates to: FSLNCLSRKRNCRKTAEVVVISD*RRDQLK Trigger: TTTAAGTTGGTCACGTCGCAAGTCCGATATCACAAC...TACCTCTGCCGTTTTCCTGCAATTCCGCTTCCTACTTAGGCAGTTCAGAGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| CDS TCA 90 bp | TCACTGAGACTGCCTTCTGAACACATAATCACAGCTCAGAGAACCTaGCAGTGTAAATCTAAGGCTGACTGCACTGGTGGCAACAAATGT | + |
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Preference number: 5 (lower is better) Translates to: SLRLPSEHIITAQRT*QCKSKADCTGGNKC Trigger: ACATTTGTTGCCACCAGTGCAGTCAGCCTTAGATTTACACTGTCAGGTTCTCTGAGCTGTGATTATGTGTTCAGAAGGCAGTCTCAGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513597.5 |
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| CDS-3UTR CAA 90 bp | TTCTCTCTGAACTGCCTAAGTAGGAAGCGGAATTGCAGGAAAACGGCAGAGGTATATAAGGAAAAGCCTTaGTCAGAGTTTGGCTGTCTC | + |
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Preference number: 5 (lower is better) Translates to: FSLNCLSRKRNCRKTAEVYKEKP*SEFGCL Trigger: GAGACAGCCAAACTCTGACAAAGGCTTTTCCTTATA...TACCTCTGCCGTTTTCCTGCAATTCCGCTTCCTACTTAGGCAGTTCAGAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| CDS GCA 90 bp | TCCAGCATCTTCATAGCCAATTCCATCTCCTGCCTCATGCTGATCTaGATCTCCAGTTCTTTCTCAACATCCAATCGTAATTGTGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: SSIFIANSISCLMLI*ISSSFSTSNRNCVS Trigger: AGAGACACAATTACGATTGGATGTTGAGAAAGAACTGGAGATGCAGATCAGCATGAGGCAGGAGATGGAATTGGCTATGAAGATGCTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000226328.8 ENST00000381006.8 ENST00000417478.6 ENST00000502653.5 |
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| CDS TCA 90 bp | TTTCACACACTGCAACTTCAACCGTTGATTCACTGTTTGGAGTATTaGGCTCTTTATGTGAGAAACCAAAGGTGGGTGTCTTCCTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: FHTLQLQPLIHCLEY*ALYVRNQRWVSSFH Trigger: GTGGAAGGAAGACACCCACCTTTGGTTTCTCACATAAAGAGCTCAATACTCCAAACAGTGAATCAACGGTTGAAGTTGCAGTGTGTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514898.1 |
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| CDS-3UTR CAA 90 bp | GGTTATTCTATAAGGAAAAGCCTTTGTCAGAGTTTGGCTGTCTCCTTCCTTTCCAAGGTAATGATCCTGTaGTTTGCAACTGCAAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: GYSIRKSLCQSLAVSFLSKVMIL*FATASS Trigger: GGAGCTTGCAGTTGCAAACAACAGGATCATTACCTT...GGAAAGGAAGGAGACAGCCAAACTCTGACAAAGGCTTTTCCTTATAGAATAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| CDS-3UTR CAA 90 bp | TTCTCTCTGAACTGCCTAAGTAGGAAGCGGAATTGCAGGAAAACGGCAGAGGTATTGGGATCAGTTTATTaGCTGCACTATTTAAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: FSLNCLSRKRNCRKTAEVLGSVY*LHYLRS Trigger: AGACCTTAAATAGTGCAGCAAATAAACTGATCCCAA...TACCTCTGCCGTTTTCCTGCAATTCCGCTTCCTACTTAGGCAGTTCAGAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| CDS-3UTR CAA 90 bp | AGTCCTTCCATGCTTTTAAGTATCCTTCCTCTAACACATGACTCTGACATGGATAAGGTAATGATCCTGTaGTTTGCAACTGCAAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: SPSMLLSILPLTHDSDMDKVMIL*FATASS Trigger: GGAGCTTGCAGTTGCAAACAACAGGATCATTACCTT...ATCCATGTCAGAGTCATGTGTTAGAGGAAGGATACTTAAAAGCATGGAAGGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417478.6 |
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| CDS-3UTR CAA 90 bp | TTGCCGAATGTACAGCACATTCTTTTCACTTCAGCACTGACAATCCAAAGTGTTATCCAGAATAGATCCTaGGAGGACACCTATCTCTCA | + |
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Preference number: 5 (lower is better) Translates to: LPNVQHILFTSALTIQSVIQNRS*EDTYLS Trigger: TGAGAGATAGGTGTCCTCCAAGGATCTATTCTGGAT...AACACTTTGGATTGTCAGTGCTGAAGTGAAAAGAATGTGCTGTACATTCGGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417478.6 |
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| CDS-3UTR CAA 90 bp | TTTGGGTTATTCTATAAGGAAAAGCCTTTGTCAGAGTTTGGCTGTCTCCTTCCTCACTATTTAAGGTCTTaGCCTGTTTCACCAAATCCT | + |
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Preference number: 5 (lower is better) Translates to: FGLFYKEKPLSEFGCLLPHYLRS*PVSPNP Trigger: AGGATTTGGTGAAACAGGCAAAGACCTTAAATAGTG...AGGAAGGAGACAGCCAAACTCTGACAAAGGCTTTTCCTTATAGAATAACCCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| CDS-3UTR CAA 90 bp | GGTTATTCTATAAGGAAAAGCCTTTGTCAGAGTTTGGCTGTCTCCTTCCTTTCCATGCCTAATGATGTTTaGGGATCAGTTTATTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GYSIRKSLCQSLAVSFLSMPNDV*GSVYLL Trigger: CAGCAAATAAACTGATCCCAAAACATCATTAGGCAT...GGAAAGGAAGGAGACAGCCAAACTCTGACAAAGGCTTTTCCTTATAGAATAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| CDS-3UTR CAA 90 bp | GTTCAAGAGCACAGGATCTTCCACTTCCATGAAGTTGGTCTAAACATATGTTCTCATCACCACAAAAGGTaGATGAAGAGAAGAATACAG | + |
|
Preference number: 5 (lower is better) Translates to: VQEHRIFHFHEVGLNICSHHHKR*MKRRIQ Trigger: CTGTATTCTTCTCTTCATCAACCTTTTGTGGTGATG...AGAACATATGTTTAGACCAACTTCATGGAAGTGGAAGATCCTGTGCTCTTGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| CDS-3UTR CAA 90 bp | GTTCAAGAGCACAGGATCTTCCACTTCCATGAAGTTGGTCTAAACATATGTTCTGTTCAATTTCGGTATTaGATCACTCCTTCCAAATGC | + |
|
Preference number: 5 (lower is better) Translates to: VQEHRIFHFHEVGLNICSVQFRY*ITPSKC Trigger: GCATTTGGAAGGAGTGATCAAATACCGAAATTGAAC...AGAACATATGTTTAGACCAACTTCATGGAAGTGGAAGATCCTGTGCTCTTGAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| CDS-3UTR CAA 90 bp | GTTCAAGAGCACAGGATCTTCCACTTCCATGAAGTTGGTCTAAACATATGTTCTGTACTGCATCATTTTTaGTTAATAGGAGAGGAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: VQEHRIFHFHEVGLNICSVLHHF*LIGEEC Trigger: ACACTCCTCTCCTATTAACAAAAAATGATGCAGTAC...AGAACATATGTTTAGACCAACTTCATGGAAGTGGAAGATCCTGTGCTCTTGAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| CDS-3UTR CAA 90 bp | TCATTCATGTCTATACCCTGTCCTTTTTACTCCAATATAAGAAAAGCAGGATACAAGTTGCAAGCAATCTaGGTTACTGAGAATAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: SFMSIPCPFYSNIRKAGYKLQAI*VTENRS Trigger: ACTTCTATTCTCAGTAACCAAGATTGCTTGCAACTT...GTATCCTGCTTTTCTTATATTGGAGTAAAAAGGACAGGGTATAGACATGAATGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| CDS-3UTR CAA 90 bp | TCATTCATGTCTATACCCTGTCCTTTTTACTCCAATATAAGAAAAGCAGGATACAAAAACCCAAGTATTTaGTCAGGACCTTTTGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SFMSIPCPFYSNIRKAGYKNPSI*SGPFEG Trigger: TCCTTCAAAAGGTCCTGACAAAATACTTGGGTTTTT...GTATCCTGCTTTTCTTATATTGGAGTAAAAAGGACAGGGTATAGACATGAATGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| CDS GCA 72 bp | GGTCAGGGCGAGGAGCCGCCGCCCCGTCCCGTCCGCTaGGCCGCCGCCGCCACCGCCACCTTTCTTCTCGGC | + |
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Preference number: 6 (lower is better) Translates to: GQGEEPPPRPVR*AAAATATFLLG Trigger: GCCGAGAAGAAAGGTGGCGGTGGCGGCGGCGGCGCAGCGGACGGGACGGGGCGGCGGCTCCTCGCCCTGACC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417478.6 |
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| CDS GCA 72 bp | CGGCACCAGCGGTGGGCGGCGGCGGGGTCTCAGCCATaGTCACTCCTTCCTTCGCCGCAGCCTCCGATTCGC | + |
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Preference number: 6 (lower is better) Translates to: RHQRWAAAGSQP*SLLPSPQPPIR Trigger: GCGAATCGGAGGCTGCGGCGAAGGAAGGAGTGAGCATGGCTGAGACCCCGCCGCCGCCCACCGCTGGTGCCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417478.6 ENST00000514898.1 |
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| CDS CCA 72 bp | TCGCCGGCTCCTCGCTGCAACTTTCGGCACCAGCGGTaGGCGGCGGCGGGGTCTCAGCCATGCTCACTCCTT | + |
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Preference number: 6 (lower is better) Translates to: SPAPRCNFRHQR*AAAGSQPCSLL Trigger: AAGGAGTGAGCATGGCTGAGACCCCGCCGCCGCCCACCGCTGGTGCCGAAAGTTGCAGCGAGGAGCCGGCGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417478.6 ENST00000514898.1 |
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| CDS GCA 72 bp | GAGTGCACTGGTGCCATCTCGTCTCACTGCAGCCTCTaGCTCCCGGGTTCAAGCGATTCTTGTGTCTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: ECTGAISSHCSL*LPGSSDSCVSA Trigger: GGCTGAGACACAAGAATCGCTTGAACCCGGGAGGCAGAGGCTGCAGTGAGACGAGATGGCACCAGTGCACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000512331.5 ENST00000515479.5 |
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| CDS TCA 72 bp | CTCCCGGGTTCAAGCGATTCTTGTGTCTCAGCCTCCTaGGTAGCTGGGATTATAGGCGTGCATCACCGTGCC | + |
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Preference number: 6 (lower is better) Translates to: LPGSSDSCVSAS*VAGIIGVHHRA Trigger: GGCACGGTGATGCACGCCTATAATCCCAGCTACTCAGGAGGCTGAGACACAAGAATCGCTTGAACCCGGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000512331.5 ENST00000515479.5 |
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| CDS TCA 72 bp | AGGATCTTCATGGGTAGGCTCTGGGTCAGGTGTAAGTaGGATGTCATCCAGCTCTCGCAGGCAGAGCCATTC | + |
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Preference number: 6 (lower is better) Translates to: RIFMGRLWVRCK*DVIQLSQAEPF Trigger: GAATGGCTCTGCCTGCGAGAGCTGGATGACATCTCACTTACACCTGACCCAGAGCCTACCCATGAAGATCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000226328.8 ENST00000381006.8 |
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| CDS TCA 72 bp | ATCACTTCCAGGATCTGCTCAGATGAGCTGGGATGCTaGGTTCTCATAGGATTGGCCGTGCGCAGTAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: ITSRICSDELGC*VLIGLAVRSKQ Trigger: CTGCTTACTGCGCACGGCCAATCCTATGAGAACTCAGCATCCCAGCTCATCTGAGCAGATCCTGGAAGTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381006.8 |
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| CDS CCA 72 bp | CATCCAGCTCTCGCAGGCAGAGCCATTCTCCATCCATaGACACTCGGAATTTGCAAAGGTAGATGGTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: HPALAGRAILHP*TLGICKGRWSP Trigger: TGGAGACCATCTACCTTTGCAAATTCCGAGTGTCCATGGATGGAGAATGGCTCTGCCTGCGAGAGCTGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000226328.8 ENST00000381006.8 |
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| CDS TCA 72 bp | CTGAGCTGCAGAAATCACTTCCAGGATCTGCTCAGATaGGCTGGGATGCTGAGTTCTCATAGGATTGGCCGT | + |
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Preference number: 6 (lower is better) Translates to: LSCRNHFQDLLR*AGMLSSHRIGR Trigger: ACGGCCAATCCTATGAGAACTCAGCATCCCAGCTCATCTGAGCAGATCCTGGAAGTGATTTCTGCAGCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381006.8 |
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| CDS TCA 72 bp | GCCAGGTTATTTTCAGGGCAGAGCAACAAGAAGGGATaGACCGTGTCCAGAAAACTTTGTCCCATAGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: ARLFSGQSNKKG*TVSRKLCPIGF Trigger: GAAGCCTATGGGACAAAGTTTTCTGGACACGGTTCATCCCTTCTTGTTGCTCTGCCCTGAAAATAACCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000502653.5 ENST00000513597.5 |
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| CDS TCA 72 bp | TGTTGGCCAGGCTGGTCTCGAACTCTTCACCTTAAGTaGTCCACTTGGATTCAAGTGATTCTTGTGCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: CWPGWSRTLHLK*STWIQVILVPQ Trigger: CTGAGGCACAAGAATCACTTGAATCCAAGTGGATCACTTAAGGTGAAGAGTTCGAGACCAGCCTGGCCAACA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512331.5 |
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| CDS TCA 72 bp | GAACTCTTCACCTTAAGTGATCCACTTGGATTCAAGTaGTTCTTGTGCCTCAGCCTCCAGAGTAGCTGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: ELFTLSDPLGFK*FLCLSLQSSWD Trigger: ATCCCAGCTACTCTGGAGGCTGAGGCACAAGAATCACTTGAATCCAAGTGGATCACTTAAGGTGAAGAGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512331.5 |
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| CDS TCA 72 bp | CCTTCTCACTTTGAGAAGTTCACTGAGACTGCCTTCTaGACACATAATCACAGCTCAGAGAACCTGACAGTG | + |
|
Preference number: 6 (lower is better) Translates to: PSHFEKFTETAF*THNHSSENLTV Trigger: CACTGTCAGGTTCTCTGAGCTGTGATTATGTGTTCAGAAGGCAGTCTCAGTGAACTTCTCAAAGTGAGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513597.5 |
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| CDS CAA 90 bp | CTTTCACACACTGCAACTTCAACCGTTGATTCACTGTTTGGAGTATaGAGCTCTTTATGTGAGAAACCAAAGGTGGGTGTCTTCCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LSHTATSTVDSLFGV*SSLCEKPKVGVFLP Trigger: TGGAAGGAAGACACCCACCTTTGGTTTCTCACATAAAGAGCTCAATACTCCAAACAGTGAATCAACGGTTGAAGTTGCAGTGTGTGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514898.1 |
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| CDS TCA 72 bp | CTGCAACTTCAACCGTTGATTCACTGTTTGGAGTATTaGGCTCTTTATGTGAGAAACCAAAGGTGGGTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LQLQPLIHCLEY*ALYVRNQRWVS Trigger: AGACACCCACCTTTGGTTTCTCACATAAAGAGCTCAATACTCCAAACAGTGAATCAACGGTTGAAGTTGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514898.1 |
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| CDS GCA 72 bp | TTCATAGCCAATTCCATCTCCTGCCTCATGCTGATCTaGATCTCCAGTTCTTTCTCAACATCCAATCGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: FIANSISCLMLI*ISSSFSTSNRN Trigger: ATTACGATTGGATGTTGAGAAAGAACTGGAGATGCAGATCAGCATGAGGCAGGAGATGGAATTGGCTATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000226328.8 ENST00000381006.8 ENST00000417478.6 ENST00000502653.5 ENST00000504805.6 |
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| CDS CAA 72 bp | CATGAGATAATTAGGATCTTCTGTATCATCGCGCATTaGCTCCACCAAATCTGTCAAATCCTCCCAAGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: HEIIRIFCIIAH*LHQICQILPRV Trigger: GACTCTTGGGAGGATTTGACAGATTTGGTGGAGCAAATGCGCGATGATACAGAAGATCCTAATTATCTCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502653.5 |
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| CDS CAA 72 bp | ACTGCAACTTCAACCGTTGATTCACTGTTTGGAGTATaGAGCTCTTTATGTGAGAAACCAAAGGTGGGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: TATSTVDSLFGV*SSLCEKPKVGV Trigger: GACACCCACCTTTGGTTTCTCACATAAAGAGCTCAATACTCCAAACAGTGAATCAACGGTTGAAGTTGCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514898.1 |
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| CDS TCA 72 bp | CTTAGTAAACTGCTCAAAGCTGTGCTACTTCCTGTGTaGGCTTCAGGCAATACATATTTGTTCAGGGTATTG | + |
|
Preference number: 6 (lower is better) Translates to: LSKLLKAVLLPV*ASGNTYLFRVL Trigger: CAATACCCTGAACAAATATGTATTGCCTGAAGCTCACACAGGAAGTAGCACAGCTTTGAGCAGTTTACTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515442.1 |
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| CDS CAA 90 bp | TATCGGACTTGCGACGTGACCAACTTAAAAATGCCTAATGATGTTTaGGGATCAGTTTATTTGCTGCACTATTTAAGGTCTTTGCCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: YRTCDVTNLKMPNDV*GSVYLLHYLRSLPV Trigger: AACAGGCAAAGACCTTAAATAGTGCAGCAAATAAACTGATCCCAAAACATCATTAGGCATTTTTAAGTTGGTCACGTCGCAAGTCCGATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| CDS CAA 90 bp | GTGACCAACTTAAAAATGCCTAATGATGTTTTGGGATCAGTTTATTaGCTGCACTATTTAAGGTCTTTGCCTGTTTCACCAAATCCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: VTNLKMPNDVLGSVY*LHYLRSLPVSPNPF Trigger: AAAAGGATTTGGTGAAACAGGCAAAGACCTTAAATAGTGCAGCAAATAAACTGATCCCAAAACATCATTAGGCATTTTTAAGTTGGTCAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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| CDS CAA 72 bp | TTAAAAATGCCTAATGATGTTTTGGGATCAGTTTATTaGCTGCACTATTTAAGGTCTTTGCCTGTTTCACCA | + |
|
Preference number: 6 (lower is better) Translates to: LKMPNDVLGSVY*LHYLRSLPVSP Trigger: TGGTGAAACAGGCAAAGACCTTAAATAGTGCAGCAAATAAACTGATCCCAAAACATCATTAGGCATTTTTAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000226328.8 |
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