RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RUBCN (Homo sapiens)

Ensembl gene IDs: ENSG00000145016

Ensembl transcript IDs: ENST00000273582.9, ENST00000296343.10, ENST00000413360.5, ENST00000415452.5, ENST00000447048.1, ENST00000449205.1, ENST00000467303.5, ENST00000471364.1, ENST00000472149.1, ENST00000474214.2

Found 1186 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AATCAAGGGCAGGGGCCAGTTCCCACATGTTCCCTCTCACGCTGGTaGAGCCTCAGCCCTGGCCATCACCTTAATGCCTCTCCCACTTCC +
Preference number: 1 (lower is better)
Translates to: NQGQGPVPTCSLSRW*SLSPGHHLNASPTS
Trigger: GGAAGTGGGAGAGGCATTAAGGTGATGGCCAGGGCTGAGGCTCCACCAGCGTGAGAGGGAACATGTGGGAACTGGCCCCTGCCCTTGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR CCA 90 bp AGGAATCAAGGGCAGGGGCCAGTTCCCACATGTTCCCTCTCACGCTaGTGGAGCCTCAGCCCTGGCCATCACCTTAATGCCTCTCCCACT +
Preference number: 1 (lower is better)
Translates to: RNQGQGPVPTCSLSR*WSLSPGHHLNASPT
Trigger: AGTGGGAGAGGCATTAAGGTGATGGCCAGGGCTGAGGCTCCACCAGCGTGAGAGGGAACATGTGGGAACTGGCCCCTGCCCTTGATTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR TCA 90 bp GAGAAGACAGGAGATGAGGACACGCTCACTACTGCAGAGACTTGGTaGGCACTAAGAGGGGAGGTAGAGGTGGTCACAATCCCGCCCCTC +
Preference number: 1 (lower is better)
Translates to: EKTGDEDTLTTAETW*ALRGEVEVVTIPPL
Trigger: GAGGGGCGGGATTGTGACCACCTCTACCTCCCCTCTTAGTGCTCACCAAGTCTCTGCAGTAGTGAGCGTGTCCTCATCTCCTGTCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296343.10
3UTR CCA 90 bp ACAGGGAGAGGGAAAACGCCATCCCCGTTTCAGCAGCAGGAGAGGTaGTTGAGAAAGGCCTGGCTCAGAAGCTCCAGAACTGAAACAAAG +
Preference number: 1 (lower is better)
Translates to: TGRGKTPSPFQQQER*LRKAWLRSSRTETK
Trigger: CTTTGTTTCAGTTCTGGAGCTTCTGAGCCAGGCCTTTCTCAACCACCTCTCCTGCTGCTGAAACGGGGATGGCGTTTTCCCTCTCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
3UTR GCA 90 bp AGCTGGAGCTCCAGTGGGCCAGGAGCAGAAGAGAAAGATGCTAGCTaGTCACAGAAGTGGGAACTGAAGCATCTAAGGCAAGTCAGATGT +
Preference number: 1 (lower is better)
Translates to: SWSSSGPGAEEKDAS*SQKWELKHLRQVRC
Trigger: ACATCTGACTTGCCTTAGATGCTTCAGTTCCCACTTCTGTGAGCAGCTAGCATCTTTCTCTTCTGCTCCTGGCCCACTGGAGCTCCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR TCA 90 bp CTTCAGAAGCTGTCAGCATTGTCATCCTTTGATCCTATGCTGATGTaGAACAGGCAGGACAAGACGGCACATCTGTCCTCCAGCGCAGTG +
Preference number: 1 (lower is better)
Translates to: LQKLSALSSFDPMLM*NRQDKTAHLSSSAV
Trigger: CACTGCGCTGGAGGACAGATGTGCCGTCTTGTCCTGCCTGTTTCACATCAGCATAGGATCAAAGGATGACAATGCTGACAGCTTCTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR TCA 90 bp TTCGGCTTCAGAAGCTGTCAGCATTGTCATCCTTTGATCCTATGCTaGTGTGAAACAGGCAGGACAAGACGGCACATCTGTCCTCCAGCG +
Preference number: 1 (lower is better)
Translates to: FGFRSCQHCHPLILC*CETGRTRRHICPPA
Trigger: CGCTGGAGGACAGATGTGCCGTCTTGTCCTGCCTGTTTCACATCAGCATAGGATCAAAGGATGACAATGCTGACAGCTTCTGAAGCCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR CCA 90 bp AGTGGGCCAGGAGCAGAAGAGAAAGATGCTAGCTGCTCACAGAAGTaGGAACTGAAGCATCTAAGGCAAGTCAGATGTTGCGGAGAGGAA +
Preference number: 1 (lower is better)
Translates to: SGPGAEEKDASCSQK*ELKHLRQVRCCGEE
Trigger: TTCCTCTCCGCAACATCTGACTTGCCTTAGATGCTTCAGTTCCCACTTCTGTGAGCAGCTAGCATCTTTCTCTTCTGCTCCTGGCCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR TCA 90 bp CCCCTAGTTAAACTTGAGTTCTGTGGGGTCATTCTTAAAGCTCCCTaGAGGACCTGGGCACTTCTAGTCACAGCCCTTCAGAACTTCTGG +
Preference number: 1 (lower is better)
Translates to: PLVKLEFCGVILKAP*RTWALLVTALQNFW
Trigger: CCAGAAGTTCTGAAGGGCTGTGACTAGAAGTGCCCAGGTCCTTCAGGGAGCTTTAAGAATGACCCCACAGAACTCAAGTTTAACTAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR GCA 90 bp CTTGGAGAAGCCACTCTGACCAGTGTTTTCACAGAGGTTAGAAGCTaGATCAACTTAAGGAACATCACAAACACACACATGGCCCCACCC +
Preference number: 1 (lower is better)
Translates to: LGEATLTSVFTEVRS*INLRNITNTHMAPP
Trigger: GGGTGGGGCCATGTGTGTGTTTGTGATGTTCCTTAAGTTGATGCAGCTTCTAACCTCTGTGAAAACACTGGTCAGAGTGGCTTCTCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR CCA 90 bp GTGACTGAAGGACATTTGGGATGTGTGTCCTCTGATGATGACTGCTaGACAAACACAACAGGAGCAGTTGCAGACAAAGTAGCTGAGGGA +
Preference number: 1 (lower is better)
Translates to: VTEGHLGCVSSDDDC*TNTTGAVADKVAEG
Trigger: TCCCTCAGCTACTTTGTCTGCAACTGCTCCTGTTGTGTTTGTCCAGCAGTCATCATCAGAGGACACACATCCCAAATGTCCTTCAGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
3UTR TCA 90 bp AGACTGTTGAGTTCGGCTTCAGAAGCTGTCAGCATTGTCATCCTTTaGTCCTATGCTGATGTGAAACAGGCAGGACAAGACGGCACATCT +
Preference number: 1 (lower is better)
Translates to: RLLSSASEAVSIVIL*SYADVKQAGQDGTS
Trigger: AGATGTGCCGTCTTGTCCTGCCTGTTTCACATCAGCATAGGATCAAAGGATGACAATGCTGACAGCTTCTGAAGCCGAACTCAACAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR GCA 90 bp CCCACGCCCATTTCTTTCCTACCAGCAAGCAACTATGAGAAGACATaGCCATGGGCAGAATTCAATCCCAGAACAAAAATGATGCAGGCT +
Preference number: 1 (lower is better)
Translates to: PTPISFLPASNYEKT*PWAEFNPRTKMMQA
Trigger: AGCCTGCATCATTTTTGTTCTGGGATTGAATTCTGCCCATGGGCATGTCTTCTCATAGTTGCTTGCTGGTAGGAAAGAAATGGGCGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR TCA 90 bp GCAGGAGAGGTGGTTGAGAAAGGCCTGGCTCAGAAGCTCCAGAACTaGAACAAAGGAAAATTGGAAATGATACCTGACATGCAGGTGAAA +
Preference number: 1 (lower is better)
Translates to: AGEVVEKGLAQKLQN*NKGKLEMIPDMQVK
Trigger: TTTCACCTGCATGTCAGGTATCATTTCCAATTTTCCTTTGTTTCAGTTCTGGAGCTTCTGAGCCAGGCCTTTCTCAACCACCTCTCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
3UTR GCA 90 bp AAAGTGACTGAAGGACATTTGGGATGTGTGTCCTCTGATGATGACTaGTGGACAAACACAACAGGAGCAGTTGCAGACAAAGTAGCTGAG +
Preference number: 1 (lower is better)
Translates to: KVTEGHLGCVSSDDD*WTNTTGAVADKVAE
Trigger: CTCAGCTACTTTGTCTGCAACTGCTCCTGTTGTGTTTGTCCAGCAGTCATCATCAGAGGACACACATCCCAAATGTCCTTCAGTCACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
3UTR TCA 90 bp GGGGACAAAGTATTTATTTTGGTCATAATGACTGAGAACAACAAATaGCGGCCGAGGGTAGACTCCCTCTCGATTCCAATCCAGAGCTCT +
Preference number: 1 (lower is better)
Translates to: GDKVFILVIMTENNK*RPRVDSLSIPIQSS
Trigger: AGAGCTCTGGATTGGAATCGAGAGGGAGTCTACCCTCGGCCGTCATTTGTTGTTCTCAGTCATTATGACCAAAATAAATACTTTGTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415452.5
3UTR CCA 90 bp CCCATTTCTTTCCTACCAGCAAGCAACTATGAGAAGACATGCCCATaGGCAGAATTCAATCCCAGAACAAAAATGATGCAGGCTTTAGTT +
Preference number: 1 (lower is better)
Translates to: PISFLPASNYEKTCP*AEFNPRTKMMQALV
Trigger: AACTAAAGCCTGCATCATTTTTGTTCTGGGATTGAATTCTGCCCATGGGCATGTCTTCTCATAGTTGCTTGCTGGTAGGAAAGAAATGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR GCA 90 bp GCTTTACATTATAACACAGAAACCTTCTCAATGTTCAGATATACCTaGTTTACAGTGGACACATGCCATTTCTTGACAGTCAAGGCAGGC +
Preference number: 1 (lower is better)
Translates to: ALHYNTETFSMFRYT*FTVDTCHFLTVKAG
Trigger: GCCTGCCTTGACTGTCAAGAAATGGCATGTGTCCACTGTAAAGCAGGTATATCTGAACATTGAGAAGGTTTCTGTGTTATAATGTAAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR TCA 90 bp CAATGTTCAGATATACCTGCTTTACAGTGGACACATGCCATTTCTTaGCAGTCAAGGCAGGCTGACGAAAGACAGAATTTTATTTCCTTA +
Preference number: 1 (lower is better)
Translates to: QCSDIPALQWTHAIS*QSRQADERQNFISL
Trigger: TAAGGAAATAAAATTCTGTCTTTCGTCAGCCTGCCTTGACTGTCAAGAAATGGCATGTGTCCACTGTAAAGCAGGTATATCTGAACATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR TCA 90 bp AACAGAAGTTTGGGAACTTACTGGAAATCAAGCTTTGGCTTCCTGTaGACTACACCAGTTTGTAACAATGAACAAAAGGGCCTTAGAACA +
Preference number: 1 (lower is better)
Translates to: NRSLGTYWKSSFGFL*TTPVCNNEQKGLRT
Trigger: TGTTCTAAGGCCCTTTTGTTCATTGTTACAAACTGGTGTAGTTCACAGGAAGCCAAAGCTTGATTTCCAGTAAGTTCCCAAACTTCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296343.10
3UTR TCA 90 bp TTTGTTGTTTTTCTCATGATTAGACTGAGGTTATGGGTTTCTGAATaGATGTCAGGGAAGATGTACCCCTTTCATTGTATTAGTAGGTAC +
Preference number: 1 (lower is better)
Translates to: FVVFLMIRLRLWVSE*MSGKMYPFHCISRY
Trigger: GTACCTACTAATACAATGAAAGGGGTACATCTTCCCTGACATTCATTCAGAAACCCATAACCTCAGTCTAATCATGAGAAAAACAACAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296343.10
3UTR-3UTR GCA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCCTGGACCCATCAACCTaGCGACGGCTGACTGCACAC +
Preference number: 2 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGALDPST*RRLTAH
Trigger: GTGTGCAGTCAGCCGTCGGCAGGTTGATGGGTCCAG...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
3UTR-3UTR GCA 90 bp CAGGACAGGGAGAGGGAAAACGCCATCCCCGTTTCAGCAGCAGGAGAGGTGGTTCTGGACCCATCAACCTaGCGACGGCTGACTGCACAC +
Preference number: 2 (lower is better)
Translates to: QDRERENAIPVSAAGEVVLDPST*RRLTAH
Trigger: GTGTGCAGTCAGCCGTCGGCAGGTTGATGGGTCCAG...AACCACCTCTCCTGCTGCTGAAACGGGGATGGCGTTTTCCCTCTCCCTGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
3UTR-3UTR CCA 90 bp TTCCACCAACCACAGGCAACTTTCCGCTCAGCTTCCAGGGCAGCACCCACGCCCTGTCACCACAGACTCTaGACCCATCAACCTGCCGAC +
Preference number: 2 (lower is better)
Translates to: FHQPQATFRSASRAAPTPCHHRL*THQPAD
Trigger: GTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACA...GGGCGTGGGTGCTGCCCTGGAAGCTGAGCGGAAAGTTGCCTGTGGTTGGTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR TCA 90 bp AGAAGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGTTCTGCAACAGGTGTaGCCCGGCCCGGAGGGAGGG +
Preference number: 2 (lower is better)
Translates to: RRPQTLEELGLAVSSTDRVLQQV*PGPEGG
Trigger: CCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAAC...TCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
3UTR-3UTR CCA 90 bp GAAGTGGTTCGCTCGAGGTCTCATGGCAAGTTAGAGACACAGCCACTCCACCTCTCCCTCTCACGCTGGTaGAGCCTCAGCCCTGGCCAT +
Preference number: 2 (lower is better)
Translates to: EVVRSRSHGKLETQPLHLSLSRW*SLSPGH
Trigger: ATGGCCAGGGCTGAGGCTCCACCAGCGTGAGAGGGA...GAGGTGGAGTGGCTGTGTCTCTAACTTGCCATGAGACCTCGAGCGAACCACTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR TCA 90 bp TTCACAGCTGCCTCTGAGGTCTCTGAGGAGTCTAGGATAGTCAGGATTGTTCTGGTTCTGCAACAGGTGTaGCCCGGCCCGGAGGGAGGG +
Preference number: 2 (lower is better)
Translates to: FTAASEVSEESRIVRIVLVLQQV*PGPEGG
Trigger: CCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAAC...CAGAACAATCCTGACTATCCTAGACTCCTCAGAGACCTCAGAGGCAGCTGTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
3UTR-3UTR TCA 90 bp GCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGTCACCTTCAACCTGCCGACGGCTaGCTGCACACAGACGTCAGA +
Preference number: 2 (lower is better)
Translates to: AHLSSSAVTWRKSWMCHLQPADG*LHTDVR
Trigger: TCTGACGTCTGTGTGCAGTCAGCCGTCGGCAGGTTG...AAGGTGACACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR TCA 90 bp TTCACAGCTGCCTCTGAGGTCTCTGAGGAGTCTAGGATAGTCAGGATTGTTCTGCCTCGGGGCACAGTCTaGCCCCAGTCCAGGACAGGG +
Preference number: 2 (lower is better)
Translates to: FTAASEVSEESRIVRIVLPRGTV*PQSRTG
Trigger: CCCTGTCCTGGACTGGGGTCAGACTGTGCCCCGAGG...CAGAACAATCCTGACTATCCTAGACTCCTCAGAGACCTCAGAGGCAGCTGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
3UTR-3UTR GCA 90 bp CAGCAGCAGGAGAGGTGGTTGAGAAAGGCCTGGCTCAGAAGCTCCAGAACTGAACTGGACCCATCAACCTaGCGACGGCTGACTGCACAC +
Preference number: 2 (lower is better)
Translates to: QQQERWLRKAWLRSSRTELDPST*RRLTAH
Trigger: GTGTGCAGTCAGCCGTCGGCAGGTTGATGGGTCCAG...TTCAGTTCTGGAGCTTCTGAGCCAGGCCTTTCTCAACCACCTCTCCTGCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
3UTR-3UTR CCA 90 bp CAGGACAGGGAGAGGGAAAACGCCATCCCCGTTTCAGCAGCAGGAGAGGTGGTTTGTCACCACAGACTCTaGACCCATCAACCTGCCGAC +
Preference number: 2 (lower is better)
Translates to: QDRERENAIPVSAAGEVVCHHRL*THQPAD
Trigger: GTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACA...AACCACCTCTCCTGCTGCTGAAACGGGGATGGCGTTTTCCCTCTCCCTGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
3UTR-3UTR CCA 90 bp TTCCACCAACCACAGGCAACTTTCCGCTCAGCTTCCAGGGCAGCACCCACGCCCACGCTAAGAAGATGGTaGGTGAGGTTCCTGTCCTCA +
Preference number: 2 (lower is better)
Translates to: FHQPQATFRSASRAAPTPTLRRW*VRFLSS
Trigger: TGAGGACAGGAACCTCACCCACCATCTTCTTAGCGT...GGGCGTGGGTGCTGCCCTGGAAGCTGAGCGGAAAGTTGCCTGTGGTTGGTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR CCA 90 bp TTCCACCAACCACAGGCAACTTTCCGCTCAGCTTCCAGGGCAGCACCCACGCCCTCACAAACACACACATaGCCCCACCCAAGGACTTCA +
Preference number: 2 (lower is better)
Translates to: FHQPQATFRSASRAAPTPSQTHT*PHPRTS
Trigger: TGAAGTCCTTGGGTGGGGCCATGTGTGTGTTTGTGA...GGGCGTGGGTGCTGCCCTGGAAGCTGAGCGGAAAGTTGCCTGTGGTTGGTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR TCA 90 bp CAGGACAGGGAGAGGGAAAACGCCATCCCCGTTTCAGCAGCAGGAGAGGTGGTTTACCTGACATGCAGGTaGAACCTAGAGGAGAAGGCC +
Preference number: 2 (lower is better)
Translates to: QDRERENAIPVSAAGEVVYLTCR*NLEEKA
Trigger: GGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTA...AACCACCTCTCCTGCTGCTGAAACGGGGATGGCGTTTTCCCTCTCCCTGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
3UTR-3UTR TCA 90 bp GAGCCTGGCCTGAGCATCAGTTCTGTTCTTTGCTTCAAGATCACCAAGGTAGATCCTCGGGGCACAGTCTaGCCCCAGTCCAGGACAGGG +
Preference number: 2 (lower is better)
Translates to: EPGLSISSVLCFKITKVDPRGTV*PQSRTG
Trigger: CCCTGTCCTGGACTGGGGTCAGACTGTGCCCCGAGG...ATCTACCTTGGTGATCTTGAAGCAAAGAACAGAACTGATGCTCAGGCCAGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
3UTR-3UTR TCA 90 bp GAAGTGGTTCGCTCGAGGTCTCATGGCAAGTTAGAGACACAGCCACTCCACCTCTGTCCTCCAGCGCAGTaGCCTGGAGAAAGAGCTGGA +
Preference number: 2 (lower is better)
Translates to: EVVRSRSHGKLETQPLHLCPPAQ*PGERAG
Trigger: TCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACA...GAGGTGGAGTGGCTGTGTCTCTAACTTGCCATGAGACCTCGAGCGAACCACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR GCA 90 bp AGGTGGAAACGCAGTTCAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGAGAGTGGCTCAGTTCTaGAACAGGTGTGACCCGGCC +
Preference number: 2 (lower is better)
Translates to: RWKRSSEHGRHTRNISTKRVAQF*NRCDPA
Trigger: GGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCT...CTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTGAACTGCGTTTCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR GCA 90 bp AGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGGCAGAGTGGCTCAGTTCTaGAACAGGTGTGACCCGGCC +
Preference number: 2 (lower is better)
Translates to: RPQTLEELGLAVSSTDRGRVAQF*NRCDPA
Trigger: GGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCT...GCCTCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
3UTR-3UTR GCA 90 bp GAAGTGGTTCGCTCGAGGTCTCATGGCAAGTTAGAGACACAGCCACTCCACCTCGGAAGGACCCAGCTCTaGTGCAGGAAGGGGAGAGAA +
Preference number: 2 (lower is better)
Translates to: EVVRSRSHGKLETQPLHLGRTQL*CRKGRE
Trigger: TTCTCTCCCCTTCCTGCAGCAGAGCTGGGTCCTTCC...GAGGTGGAGTGGCTGTGTCTCTAACTTGCCATGAGACCTCGAGCGAACCACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR CCA 90 bp GCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGTCACCTTCTTCAGCGACAGAGCTaGCGCCTCACGTATGCTTGC +
Preference number: 2 (lower is better)
Translates to: AHLSSSAVTWRKSWMCHLLQRQS*RLTYAC
Trigger: GCAAGCATACGTGAGGCGCCAGCTCTGTCGCTGAAG...AAGGTGACACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR TCA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGCAACCTGCCGACGGCTaGCTGCACACAGACGTCAGA +
Preference number: 2 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKQPADG*LHTDVR
Trigger: TCTGACGTCTGTGTGCAGTCAGCCGTCGGCAGGTTG...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
3UTR-3UTR GCA 90 bp CAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGACTCGCACTCCTTTTAAGAGTGGCTCAGTTCTaGAACAGGTGTGACCCGGCC +
Preference number: 2 (lower is better)
Translates to: QSTGGTHGTSLLRLALLLRVAQF*NRCDPA
Trigger: GGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCT...TAAAAGGAGTGCGAGTCTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR CCA 90 bp GAAGTGGTTCGCTCGAGGTCTCATGGCAAGTTAGAGACACAGCCACTCCACCTCCACGATCTAAAGGGATaGGGTGCGGTTGAGGGAGCT +
Preference number: 2 (lower is better)
Translates to: EVVRSRSHGKLETQPLHLHDLKG*GAVEGA
Trigger: AGCTCCCTCAACCGCACCCCATCCCTTTAGATCGTG...GAGGTGGAGTGGCTGTGTCTCTAACTTGCCATGAGACCTCGAGCGAACCACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR CAA 90 bp GCACCAGCTCCTCCCCTCACTCGAGGTTCTTTAGATCAGGATGATTaGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTCCAGTTCCT +
Preference number: 2 (lower is better)
Translates to: APAPPLTRGSLDQDD*AALQAKEQQPFPVP
Trigger: AGGAACTGGAAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAGGGGAGGAGCTGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
3UTR-3UTR TCA 90 bp CACCCTCAATGGGAGAAGGAATTAAACTCCACCTCCTGGGAGAATTTACGTATTGTTCTGCAACAGGTGTaGCCCGGCCCGGAGGGAGGG +
Preference number: 2 (lower is better)
Translates to: HPQWEKELNSTSWENLRIVLQQV*PGPEGG
Trigger: CCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAAC...AATACGTAAATTCTCCCAGGAGGTGGAGTTTAATTCCTTCTCCCATTGAGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
3UTR-3UTR GCA 90 bp GGAGTAGGAATGAGACGATGCGTGATGAGCTCAGTGTGCCACTTACAGAGGAAGCTGCCGACGGCTGACTaGACACAGACGTCAGACAAG +
Preference number: 2 (lower is better)
Translates to: GVGMRRCVMSSVCHLQRKLPTAD*TQTSDK
Trigger: CTTGTCTGACGTCTGTGTGCAGTCAGCCGTCGGCAG...CTTCCTCTGTAAGTGGCACACTGAGCTCATCACGCATCGTCTCATTCCTACTCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR GCA 90 bp CTAAGAGGGGAGGTAGAGGTGGTCACAATCCCGCCCCTCATGCCACAGTGTGCTGGGATTACAAGCACATaGCACCATGCCTGGCTAATT +
Preference number: 2 (lower is better)
Translates to: LRGEVEVVTIPPLMPQCAGITST*HHAWLI
Trigger: AATTAGCCAGGCATGGTGGCATGTGCTTGTAATCCC...AGCACACTGTGGCATGAGGGGCGGGATTGTGACCACCTCTACCTCCCCTCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296343.10
3UTR-3UTR CCA 90 bp GCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGTCACCTTGAAGGCCACAGACGCTaGAAGAACTTGGTCTTGCTG +
Preference number: 2 (lower is better)
Translates to: AHLSSSAVTWRKSWMCHLEGHRR*KNLVLL
Trigger: CAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCTTC...AAGGTGACACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR CCA 90 bp AGGTGGAAACGCAGTTCAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGTCCAGCGCAGTGACCTaGAGAAAGAGCTGGATGTGT +
Preference number: 2 (lower is better)
Translates to: RWKRSSEHGRHTRNISTKSSAVT*RKSWMC
Trigger: ACACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGA...CTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTGAACTGCGTTTCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR CCA 90 bp ATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTCCAGTTCCTCTCCCAGCTTCCTCAAGCTAAGTaGCAAGAACCCCAGGTCCAC +
Preference number: 2 (lower is better)
Translates to: IWLLSRLRNSSPFQFLSQLPQAK*QEPQVH
Trigger: GTGGACCTGGGGTTCTTGCCACTTAGCTTGAGGAAG...CTGGGAGAGGAACTGGAAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
3UTR-3UTR CCA 90 bp GCCACCGTGCCTGGCCAACACTTCTTGAGTGAAAGTCTACTCGGTCTTGCCCGGTCTCCCAGTGCTGACTaGCCATTTCAACTTCCTCAA +
Preference number: 2 (lower is better)
Translates to: ATVPGQHFLSESLLGLARSPSAD*PFQLPQ
Trigger: TTGAGGAAGTTGAAATGGCCAGTCAGCACTGGGAGA...CCGGGCAAGACCGAGTAGACTTTCACTCAAGAAGTGTTGGCCAGGCACGGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
3UTR CAA 90 bp GAAGGACCCAGCTCTGCTGCAGGAAGGGGAGAGAACGGAGTCGGGTaGTACTTTTACTCAGAAGCACAACGACCATCTAACAGAGGACAG +
Preference number: 2 (lower is better)
Translates to: EGPSSAAGRGENGVG*YFYSEAQRPSNRGQ
Trigger: CTGTCCTCTGTTAGATGGTCGTTGTGCTTCTGAGTAAAAGTACAACCCGACTCCGTTCTCTCCCCTTCCTGCAGCAGAGCTGGGTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR TCA 90 bp GCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGTCACCTTCCCGCATGTCAGTTCTaGTGGAAACACCTGGTGTTT +
Preference number: 2 (lower is better)
Translates to: AHLSSSAVTWRKSWMCHLPACQF*WKHLVF
Trigger: AAACACCAGGTGTTTCCATCAGAACTGACATGCGGG...AAGGTGACACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR TCA 90 bp AGAATTCAATCCCAGAACAAAAATGATGCAGGCTTTAGTTCACAGAGCTGCCAGCCTCGGGGCACAGTCTaGCCCCAGTCCAGGACAGGG +
Preference number: 2 (lower is better)
Translates to: RIQSQNKNDAGFSSQSCQPRGTV*PQSRTG
Trigger: CCCTGTCCTGGACTGGGGTCAGACTGTGCCCCGAGG...CTGGCAGCTCTGTGAACTAAAGCCTGCATCATTTTTGTTCTGGGATTGAATTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR CCA 90 bp AGGTGGAAACGCAGTTCAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGAGGGTTTCACCACATTaGCCAGGCTGGTCTCAAACT +
Preference number: 2 (lower is better)
Translates to: RWKRSSEHGRHTRNISTKRVSPH*PGWSQT
Trigger: AGTTTGAGACCAGCCTGGCCAATGTGGTGAAACCCT...CTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTGAACTGCGTTTCCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR TCA 90 bp ACGAAAGCTCTAAATCCTTGGCAGAGAACGTCAAAAACAGCCTCATTTAAGTGGGGCCGACCGCTCCTCTaGGTAAGCGCTCCTTCAGCG +
Preference number: 2 (lower is better)
Translates to: TKALNPWQRTSKTASFKWGRPLL*VSAPSA
Trigger: CGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCC...CCACTTAAATGAGGCTGTTTTTGACGTTCTCTGCCAAGGATTTAGAGCTTTCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR GCA 90 bp TGTGGCCCCCAAAATACCCAAATAAGTGGACGAAATGCCCATGACGTAGTCCTACTGCCGACGGCTGACTaGACACAGACGTCAGACAAG +
Preference number: 2 (lower is better)
Translates to: CGPQNTQISGRNAHDVVLLPTAD*TQTSDK
Trigger: CTTGTCTGACGTCTGTGTGCAGTCAGCCGTCGGCAG...TAGGACTACGTCATGGGCATTTCGTCCACTTATTTGGGTATTTTGGGGGCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
3UTR-3UTR GCA 90 bp TCTTTGTACTCTCAGCTCTGGCATGGTGTCTGGAACACGGAGGCATCTATAGATGGAAGGACCCAGCTCTaGTGCAGGAAGGGGAGAGAA +
Preference number: 2 (lower is better)
Translates to: SLYSQLWHGVWNTEASIDGRTQL*CRKGRE
Trigger: TTCTCTCCCCTTCCTGCAGCAGAGCTGGGTCCTTCC...ATCTATAGATGCCTCCGTGTTCCAGACACCATGCCAGAGCTGAGAGTACAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296343.10
3UTR-3UTR CCA 90 bp CAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGACTCGCACTCCTTTTAAGGGTTTCACCACATTaGCCAGGCTGGTCTCAAACT +
Preference number: 2 (lower is better)
Translates to: QSTGGTHGTSLLRLALLLRVSPH*PGWSQT
Trigger: AGTTTGAGACCAGCCTGGCCAATGTGGTGAAACCCT...TAAAAGGAGTGCGAGTCTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR GCA 90 bp GGAGTAGGAATGAGACGATGCGTGATGAGCTCAGTGTGCCACTTACAGAGGAAGATGGCATCAGGGACCTaGCTGAGCTTCAAAGATCAC +
Preference number: 2 (lower is better)
Translates to: GVGMRRCVMSSVCHLQRKMASGT*LSFKDH
Trigger: GTGATCTTTGAAGCTCAGGCAGGTCCCTGATGCCAT...CTTCCTCTGTAAGTGGCACACTGAGCTCATCACGCATCGTCTCATTCCTACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR GCA 90 bp CTAAGAGGGGAGGTAGAGGTGGTCACAATCCCGCCCCTCATGCCACAGTGTGCTTTTACAGTGGACACATaGCATTTCTTGACAGTCAAG +
Preference number: 2 (lower is better)
Translates to: LRGEVEVVTIPPLMPQCAFTVDT*HFLTVK
Trigger: CTTGACTGTCAAGAAATGGCATGTGTCCACTGTAAA...AGCACACTGTGGCATGAGGGGCGGGATTGTGACCACCTCTACCTCCCCTCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296343.10
3UTR-3UTR GCA 90 bp CTAAGAGGGGAGGTAGAGGTGGTCACAATCCCGCCCCTCATGCCACAGTGTGCTATGTTCAGATATACCTaGTTTACAGTGGACACATGC +
Preference number: 2 (lower is better)
Translates to: LRGEVEVVTIPPLMPQCAMFRYT*FTVDTC
Trigger: GCATGTGTCCACTGTAAAGCAGGTATATCTGAACAT...AGCACACTGTGGCATGAGGGGCGGGATTGTGACCACCTCTACCTCCCCTCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296343.10
3UTR-3UTR CCA 90 bp TTCACAGCTGCCTCTGAGGTCTCTGAGGAGTCTAGGATAGTCAGGATTGTTCTGAAAAGAAGCCCCAGGTaGGGCGAGTCCTTCAAAGAG +
Preference number: 2 (lower is better)
Translates to: FTAASEVSEESRIVRIVLKRSPR*GESFKE
Trigger: CTCTTTGAAGGACTCGCCCCACCTGGGGCTTCTTTT...CAGAACAATCCTGACTATCCTAGACTCCTCAGAGACCTCAGAGGCAGCTGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
3UTR CAA 90 bp GGCACTTCTAGTCACAGCCCTTCAGAACTTCTGGGACTTGGCTTTTaGAGTCTCACTATGAACAGAAGGGAGAACAGCCTCAGGGTCTTC +
Preference number: 2 (lower is better)
Translates to: GTSSHSPSELLGLGF*SLTMNRRENSLRVF
Trigger: GAAGACCCTGAGGCTGTTCTCCCTTCTGTTCATAGTGAGACTCAAAAAGCCAAGTCCCAGAAGTTCTGAAGGGCTGTGACTAGAAGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR TCA 90 bp TTCACAGCTGCCTCTGAGGTCTCTGAGGAGTCTAGGATAGTCAGGATTGTTCTGCCCGCATGTCAGTTCTaGTGGAAACACCTGGTGTTT +
Preference number: 2 (lower is better)
Translates to: FTAASEVSEESRIVRIVLPACQF*WKHLVF
Trigger: AAACACCAGGTGTTTCCATCAGAACTGACATGCGGG...CAGAACAATCCTGACTATCCTAGACTCCTCAGAGACCTCAGAGGCAGCTGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
3UTR-3UTR TCA 90 bp GAAGTGGTTCGCTCGAGGTCTCATGGCAAGTTAGAGACACAGCCACTCCACCTCGCTTTTCTCCAACTTTaGCCAAAGAAGCTAAGGCAA +
Preference number: 2 (lower is better)
Translates to: EVVRSRSHGKLETQPLHLAFLQL*PKKLRQ
Trigger: TTGCCTTAGCTTCTTTGGTCAAAGTTGGAGAAAAGC...GAGGTGGAGTGGCTGTGTCTCTAACTTGCCATGAGACCTCGAGCGAACCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR GCA 90 bp GAGCCTGGCCTGAGCATCAGTTCTGTTCTTTGCTTCAAGATCACCAAGGTAGATAGTCCTATTCTCTGCTaGTTCTCCTCGGGGCACAGT +
Preference number: 2 (lower is better)
Translates to: EPGLSISSVLCFKITKVDSPILC*FSSGHS
Trigger: ACTGTGCCCCGAGGAGAAGCAGCAGAGAATAGGACT...ATCTACCTTGGTGATCTTGAAGCAAAGAACAGAACTGATGCTCAGGCCAGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
3UTR-3UTR GCA 90 bp AAGGGGAGAGAACGGAGTCGGGTTGTACTTTTACTCAGAAGCACAACGACCATCATGGCATCAGGGACCTaGCTGAGCTTCAAAGATCAC +
Preference number: 2 (lower is better)
Translates to: KGRERSRVVLLLRSTTTIMASGT*LSFKDH
Trigger: GTGATCTTTGAAGCTCAGGCAGGTCCCTGATGCCAT...GATGGTCGTTGTGCTTCTGAGTAAAAGTACAACCCGACTCCGTTCTCTCCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR GCA 90 bp CAAGACGGCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGACAGAGGTTAGAAGCTaGATCAACTTAAGGAACATC +
Preference number: 2 (lower is better)
Translates to: QDGTSVLQRSDLEKELDVTEVRS*INLRNI
Trigger: GATGTTCCTTAAGTTGATGCAGCTTCTAACCTCTGT...CACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGCCGTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR CCA 90 bp GCATCCTCTATGCTTCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACACAGCAGCAGGAGAGGTaGTTGAGAAAGGCCTGGCTC +
Preference number: 2 (lower is better)
Translates to: ASSMLQIFQTGTPGNIGTQQQER*LRKAWL
Trigger: GAGCCAGGCCTTTCTCAACCACCTCTCCTGCTGCTG...TGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGAAGCATAGAGGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
3UTR-3UTR CCA 90 bp CACCTCATTTTAAGTGACAGTTACACCATGCACCAGAAACCCAGAGAAGTGAAGCCTCTCCCACTTCCCTaGGAGACTCCTTCTTACCGC +
Preference number: 2 (lower is better)
Translates to: HLILSDSYTMHQKPREVKPLPLP*ETPSYR
Trigger: GCGGTAAGAAGGAGTCTCCCAGGGAAGTGGGAGAGG...CTTCACTTCTCTGGGTTTCTGGTGCATGGTGTAACTGTCACTTAAAATGAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR CCA 90 bp TCTTTGTACTCTCAGCTCTGGCATGGTGTCTGGAACACGGAGGCATCTATAGATCAGGATGGAGTGCAATaGAGCAAGCTTGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: SLYSQLWHGVWNTEASIDQDGVQ*SKLGSL
Trigger: CAGTGAGCCAAGCTTGCTCCATTGCACTCCATCCTG...ATCTATAGATGCCTCCGTGTTCCAGACACCATGCCAGAGCTGAGAGTACAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
3UTR-3UTR TCA 90 bp GAGCCTGGCCTGAGCATCAGTTCTGTTCTTTGCTTCAAGATCACCAAGGTAGATCCCGCATGTCAGTTCTaGTGGAAACACCTGGTGTTT +
Preference number: 2 (lower is better)
Translates to: EPGLSISSVLCFKITKVDPACQF*WKHLVF
Trigger: AAACACCAGGTGTTTCCATCAGAACTGACATGCGGG...ATCTACCTTGGTGATCTTGAAGCAAAGAACAGAACTGATGCTCAGGCCAGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
3UTR-3UTR TCA 90 bp GAGCCTGGCCTGAGCATCAGTTCTGTTCTTTGCTTCAAGATCACCAAGGTAGATTGGACGAAATGCCCATaGCGTAGTCCTATTCTCTGC +
Preference number: 2 (lower is better)
Translates to: EPGLSISSVLCFKITKVDWTKCP*RSPILC
Trigger: GCAGAGAATAGGACTACGTCATGGGCATTTCGTCCA...ATCTACCTTGGTGATCTTGAAGCAAAGAACAGAACTGATGCTCAGGCCAGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
3UTR-3UTR TCA 90 bp GGAGTAGGAATGAGACGATGCGTGATGAGCTCAGTGTGCCACTTACAGAGGAAGTTTAAGGGGAAATGTTaGGAGAGTTGCAGCGTAGAG +
Preference number: 2 (lower is better)
Translates to: GVGMRRCVMSSVCHLQRKFKGKC*ESCSVE
Trigger: CTCTACGCTGCAACTCTCTCAACATTTCCCCTTAAA...CTTCCTCTGTAAGTGGCACACTGAGCTCATCACGCATCGTCTCATTCCTACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR GCA 90 bp AGAATTCAATCCCAGAACAAAAATGATGCAGGCTTTAGTTCACAGAGCTGCCAGCTGGCGCCTCACGTATaGTTGCGGCGTAAGGCTACA +
Preference number: 2 (lower is better)
Translates to: RIQSQNKNDAGFSSQSCQLAPHV*LRRKAT
Trigger: TGTAGCCTTACGCCGCAAGCATACGTGAGGCGCCAG...CTGGCAGCTCTGTGAACTAAAGCCTGCATCATTTTTGTTCTGGGATTGAATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR CCA 90 bp GCATCCTCTATGCTTCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATGTCACCACAGACTCTaGACCCATCAACCTGCCGAC +
Preference number: 2 (lower is better)
Translates to: ASSMLQIFQTGTPGNIGTCHHRL*THQPAD
Trigger: GTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACA...TGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGAAGCATAGAGGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
3UTR-3UTR CCA 90 bp TGTGGCCCCCAAAATACCCAAATAAGTGGACGAAATGCCCATGACGTAGTCCTAGACGCTGGAAGAACTTaGTCTTGCTGTCTCTTCCAC +
Preference number: 2 (lower is better)
Translates to: CGPQNTQISGRNAHDVVLDAGRT*SCCLFH
Trigger: GTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTC...TAGGACTACGTCATGGGCATTTCGTCCACTTATTTGGGTATTTTGGGGGCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
3UTR-3UTR CCA 90 bp AGAATTCAATCCCAGAACAAAAATGATGCAGGCTTTAGTTCACAGAGCTGCCAGCAGCAGCAGGAGAGGTaGTTGAGAAAGGCCTGGCTC +
Preference number: 2 (lower is better)
Translates to: RIQSQNKNDAGFSSQSCQQQQER*LRKAWL
Trigger: GAGCCAGGCCTTTCTCAACCACCTCTCCTGCTGCTG...CTGGCAGCTCTGTGAACTAAAGCCTGCATCATTTTTGTTCTGGGATTGAATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR CCA 90 bp AGGTGGAAACGCAGTTCAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGAAGAAAGTCAGCTTGTaGCATCCTCTATGCTTCAAA +
Preference number: 2 (lower is better)
Translates to: RWKRSSEHGRHTRNISTKKKVSL*HPLCFK
Trigger: TTTGAAGCATAGAGGATGCCACAAGCTGACTTTCTT...CTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTGAACTGCGTTTCCACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR CCA 90 bp GAAGTGGTTCGCTCGAGGTCTCATGGCAAGTTAGAGACACAGCCACTCCACCTCAGAACTTCTGGGACTTaGCTTTTTGAGTCTCACTAT +
Preference number: 2 (lower is better)
Translates to: EVVRSRSHGKLETQPLHLRTSGT*LFESHY
Trigger: ATAGTGAGACTCAAAAAGCCAAGTCCCAGAAGTTCT...GAGGTGGAGTGGCTGTGTCTCTAACTTGCCATGAGACCTCGAGCGAACCACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR TCA 90 bp GCATCCTCTATGCTTCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATACCTGACATGCAGGTaGAACCTAGAGGAGAAGGCC +
Preference number: 2 (lower is better)
Translates to: ASSMLQIFQTGTPGNIGTYLTCR*NLEEKA
Trigger: GGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTA...TGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGAAGCATAGAGGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
3UTR-3UTR TCA 90 bp TCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATTCACAGCTGCCTCTGGACGAAATGCCCATaGCGTAGTCCTATTCTCTGC +
Preference number: 2 (lower is better)
Translates to: SNISNRNSRQHRDIHSCLWTKCP*RSPILC
Trigger: GCAGAGAATAGGACTACGTCATGGGCATTTCGTCCA...GAGGCAGCTGTGAATGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
3UTR-3UTR TCA 90 bp CACCTCATTTTAAGTGACAGTTACACCATGCACCAGAAACCCAGAGAAGTGAAGCATCAGGGACCTGCCTaGGCTTCAAAGATCACACCT +
Preference number: 2 (lower is better)
Translates to: HLILSDSYTMHQKPREVKHQGPA*ASKITP
Trigger: AGGTGTGATCTTTGAAGCTCAGGCAGGTCCCTGATG...CTTCACTTCTCTGGGTTTCTGGTGCATGGTGTAACTGTCACTTAAAATGAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR GCA 90 bp GCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGTCACCTTCTACACAGAGTTAAGTaGATAATTGGCATAAAGGCT +
Preference number: 2 (lower is better)
Translates to: AHLSSSAVTWRKSWMCHLLHRVK*IIGIKA
Trigger: AGCCTTTATGCCAATTATGCACTTAACTCTGTGTAG...AAGGTGACACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR CCA 90 bp ACGAAAGCTCTAAATCCTTGGCAGAGAACGTCAAAAACAGCCTCATTTAAGTGGCACGATCTAAAGGGATaGGGTGCGGTTGAGGGAGCT +
Preference number: 2 (lower is better)
Translates to: TKALNPWQRTSKTASFKWHDLKG*GAVEGA
Trigger: AGCTCCCTCAACCGCACCCCATCCCTTTAGATCGTG...CCACTTAAATGAGGCTGTTTTTGACGTTCTCTGCCAAGGATTTAGAGCTTTCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR TCA 90 bp AGAATTCAATCCCAGAACAAAAATGATGCAGGCTTTAGTTCACAGAGCTGCCAGTACCTGACATGCAGGTaGAACCTAGAGGAGAAGGCC +
Preference number: 2 (lower is better)
Translates to: RIQSQNKNDAGFSSQSCQYLTCR*NLEEKA
Trigger: GGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTA...CTGGCAGCTCTGTGAACTAAAGCCTGCATCATTTTTGTTCTGGGATTGAATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR TCA 90 bp GATGACTGCTGGACAAACACAACAGGAGCAGTTGCAGACAAAGTAGCTGAGGGAACACCTCATTTTAAGTaGCAGTTACACCATGCACCA +
Preference number: 2 (lower is better)
Translates to: DDCWTNTTGAVADKVAEGTPHFK*QLHHAP
Trigger: TGGTGCATGGTGTAACTGTCACTTAAAATGAGGTGT...TCCCTCAGCTACTTTGTCTGCAACTGCTCCTGTTGTGTTTGTCCAGCAGTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296343.10
3UTR-3UTR GCA 90 bp ACGAAAGCTCTAAATCCTTGGCAGAGAACGTCAAAAACAGCCTCATTTAAGTGGAGTCCTATTCTCTGCTaGTTCTCCTCGGGGCACAGT +
Preference number: 2 (lower is better)
Translates to: TKALNPWQRTSKTASFKWSPILC*FSSGHS
Trigger: ACTGTGCCCCGAGGAGAAGCAGCAGAGAATAGGACT...CCACTTAAATGAGGCTGTTTTTGACGTTCTCTGCCAAGGATTTAGAGCTTTCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR GCA 90 bp GGAGTAGGAATGAGACGATGCGTGATGAGCTCAGTGTGCCACTTACAGAGGAAGACAGAGGTTAGAAGCTaGATCAACTTAAGGAACATC +
Preference number: 2 (lower is better)
Translates to: GVGMRRCVMSSVCHLQRKTEVRS*INLRNI
Trigger: GATGTTCCTTAAGTTGATGCAGCTTCTAACCTCTGT...CTTCCTCTGTAAGTGGCACACTGAGCTCATCACGCATCGTCTCATTCCTACTCC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR CCA 90 bp CAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGACTCGCACTCCTTTTAAAAGCTCTAAATCCTTaGCAGAGAACGTCAAAAACA +
Preference number: 2 (lower is better)
Translates to: QSTGGTHGTSLLRLALLLKALNP*QRTSKT
Trigger: TGTTTTTGACGTTCTCTGCCAAGGATTTAGAGCTTT...TAAAAGGAGTGCGAGTCTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR TCA 90 bp AGAATTCAATCCCAGAACAAAAATGATGCAGGCTTTAGTTCACAGAGCTGCCAGTGGACGAAATGCCCATaGCGTAGTCCTATTCTCTGC +
Preference number: 2 (lower is better)
Translates to: RIQSQNKNDAGFSSQSCQWTKCP*RSPILC
Trigger: GCAGAGAATAGGACTACGTCATGGGCATTTCGTCCA...CTGGCAGCTCTGTGAACTAAAGCCTGCATCATTTTTGTTCTGGGATTGAATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR GCA 90 bp CACCTCATTTTAAGTGACAGTTACACCATGCACCAGAAACCCAGAGAAGTGAAGTTTAGTTCACAGAGCTaGCAGCTCTTGGAGAAGCCA +
Preference number: 2 (lower is better)
Translates to: HLILSDSYTMHQKPREVKFSSQS*QLLEKP
Trigger: TGGCTTCTCCAAGAGCTGGCAGCTCTGTGAACTAAA...CTTCACTTCTCTGGGTTTCTGGTGCATGGTGTAACTGTCACTTAAAATGAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR GCA 90 bp CACCCTCAATGGGAGAAGGAATTAAACTCCACCTCCTGGGAGAATTTACGTATTTTTAGTTCACAGAGCTaGCAGCTCTTGGAGAAGCCA +
Preference number: 2 (lower is better)
Translates to: HPQWEKELNSTSWENLRIFSSQS*QLLEKP
Trigger: TGGCTTCTCCAAGAGCTGGCAGCTCTGTGAACTAAA...AATACGTAAATTCTCCCAGGAGGTGGAGTTTAATTCCTTCTCCCATTGAGGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296343.10
3UTR-3UTR GCA 90 bp CAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGACTCGCACTCCTTTTAAAGAACACTATCACCTaGCTTCATTTAGAAGGAATT +
Preference number: 2 (lower is better)
Translates to: QSTGGTHGTSLLRLALLLKNTIT*LHLEGI
Trigger: AATTCCTTCTAAATGAAGGCAGGTGATAGTGTTCTT...TAAAAGGAGTGCGAGTCTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR CCA 90 bp TCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATTCACAGCTGCCTCGTCAGGATTGTTCTGTaGCCCCCAAAATACCCAAAT +
Preference number: 2 (lower is better)
Translates to: SNISNRNSRQHRDIHSCLVRIVL*PPKYPN
Trigger: ATTTGGGTATTTTGGGGGCCACAGAACAATCCTGAC...GAGGCAGCTGTGAATGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
3UTR-3UTR CCA 90 bp ACGAAAGCTCTAAATCCTTGGCAGAGAACGTCAAAAACAGCCTCATTTAAGTGGACGCTAAGAAGATGGTaGGTGAGGTTCCTGTCCTCA +
Preference number: 2 (lower is better)
Translates to: TKALNPWQRTSKTASFKWTLRRW*VRFLSS
Trigger: TGAGGACAGGAACCTCACCCACCATCTTCTTAGCGT...CCACTTAAATGAGGCTGTTTTTGACGTTCTCTGCCAAGGATTTAGAGCTTTCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR CCA 90 bp CACCCTCAATGGGAGAAGGAATTAAACTCCACCTCCTGGGAGAATTTACGTATTGAGAAGACATGCCCATaGGCAGAATTCAATCCCAGA +
Preference number: 2 (lower is better)
Translates to: HPQWEKELNSTSWENLRIEKTCP*AEFNPR
Trigger: TCTGGGATTGAATTCTGCCCATGGGCATGTCTTCTC...AATACGTAAATTCTCCCAGGAGGTGGAGTTTAATTCCTTCTCCCATTGAGGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
3UTR-3UTR TCA 90 bp GAGCCTGGCCTGAGCATCAGTTCTGTTCTTTGCTTCAAGATCACCAAGGTAGATCAGAAGCTCCAGAACTaGAACAAAGGAAAATTGGAA +
Preference number: 2 (lower is better)
Translates to: EPGLSISSVLCFKITKVDQKLQN*NKGKLE
Trigger: TTCCAATTTTCCTTTGTTTCAGTTCTGGAGCTTCTG...ATCTACCTTGGTGATCTTGAAGCAAAGAACAGAACTGATGCTCAGGCCAGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
3UTR-3UTR TCA 90 bp TCTTTGTACTCTCAGCTCTGGCATGGTGTCTGGAACACGGAGGCATCTATAGATAAAATAAGTGACAAGTaGGGAGCCTATGAGACTGTT +
Preference number: 2 (lower is better)
Translates to: SLYSQLWHGVWNTEASIDKISDK*GAYETV
Trigger: AACAGTCTCATAGGCTCCTCACTTGTCACTTATTTT...ATCTATAGATGCCTCCGTGTTCCAGACACCATGCCAGAGCTGAGAGTACAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296343.10
3UTR-3UTR TCA 90 bp GATGACTGCTGGACAAACACAACAGGAGCAGTTGCAGACAAAGTAGCTGAGGGAATTTTCAAACCTGGGTaGCTAATGGTTAGGTTTTTG +
Preference number: 2 (lower is better)
Translates to: DDCWTNTTGAVADKVAEGIFKPG*LMVRFL
Trigger: CAAAAACCTAACCATTAGTCACCCAGGTTTGAAAAT...TCCCTCAGCTACTTTGTCTGCAACTGCTCCTGTTGTGTTTGTCCAGCAGTCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296343.10
3UTR-3UTR CCA 90 bp CACCTCATTTTAAGTGACAGTTACACCATGCACCAGAAACCCAGAGAAGTGAAGGTCAGGATTGTTCTGTaGCCCCCAAAATACCCAAAT +
Preference number: 2 (lower is better)
Translates to: HLILSDSYTMHQKPREVKVRIVL*PPKYPN
Trigger: ATTTGGGTATTTTGGGGGCCACAGAACAATCCTGAC...CTTCACTTCTCTGGGTTTCTGGTGCATGGTGTAACTGTCACTTAAAATGAGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR TCA 90 bp CACCCTCAATGGGAGAAGGAATTAAACTCCACCTCCTGGGAGAATTTACGTATTCAGAAGCTCCAGAACTaGAACAAAGGAAAATTGGAA +
Preference number: 2 (lower is better)
Translates to: HPQWEKELNSTSWENLRIQKLQN*NKGKLE
Trigger: TTCCAATTTTCCTTTGTTTCAGTTCTGGAGCTTCTG...AATACGTAAATTCTCCCAGGAGGTGGAGTTTAATTCCTTCTCCCATTGAGGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296343.10
3UTR CAA 90 bp CTTGGCAGAGAACGTCAAAAACAGCCTCATTTAAGTGGAAAATATTaGTCTTCCACTCTTCTGCTATGTCTTGAATCTTGTCTCCACCTG +
Preference number: 2 (lower is better)
Translates to: LGRERQKQPHLSGKY*SSTLLLCLESCLHL
Trigger: CAGGTGGAGACAAGATTCAAGACATAGCAGAAGAGTGGAAGACAAATATTTTCCACTTAAATGAGGCTGTTTTTGACGTTCTCTGCCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR GCA 72 bp AGCGCTCCTTCAGCGACAGAGCTGGCGCCTCACGTATaGTTGCGGCGTAAGGCTACAGGTGAGCCTGGCCTG +
Preference number: 3 (lower is better)
Translates to: SAPSATELAPHV*LRRKATGEPGL
Trigger: CAGGCCAGGCTCACCTGTAGCCTTACGCCGCAAGCATACGTGAGGCGCCAGCTCTGTCGCTGAAGGAGCGCT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
3UTR TCA 72 bp GAGACCTTAACACCAAGAGGGGGCCGACCGCTCCTCTaGGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCT +
Preference number: 3 (lower is better)
Translates to: ETLTPRGGRPLL*VSAPSATELAP
Trigger: AGGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCTCTTGGTGTTAAGGTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
3UTR CCA 72 bp CAGGGGCCAGTTCCCACATGTTCCCTCTCACGCTGGTaGAGCCTCAGCCCTGGCCATCACCTTAATGCCTCT +
Preference number: 3 (lower is better)
Translates to: QGPVPTCSLSRW*SLSPGHHLNAS
Trigger: AGAGGCATTAAGGTGATGGCCAGGGCTGAGGCTCCACCAGCGTGAGAGGGAACATGTGGGAACTGGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR CAA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCTGGAAGAACTTGGTCTaGCTGTCTCTTCCACTGACA +
Preference number: 3 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGAWKNLV*LSLPLT
Trigger: TGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCA...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
3UTR CCA 72 bp GGGAAAACGCCATCCCCGTTTCAGCAGCAGGAGAGGTaGTTGAGAAAGGCCTGGCTCAGAAGCTCCAGAACT +
Preference number: 3 (lower is better)
Translates to: GKTPSPFQQQER*LRKAWLRSSRT
Trigger: AGTTCTGGAGCTTCTGAGCCAGGCCTTTCTCAACCACCTCTCCTGCTGCTGAAACGGGGATGGCGTTTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
3UTR-3UTR CAA 90 bp TTCCACCAACCACAGGCAACTTTCCGCTCAGCTTCCAGGGCAGCACCCACGCCCATGAAGAAAGTCAGCTaGTGGCATCCTCTATGCTTC +
Preference number: 3 (lower is better)
Translates to: FHQPQATFRSASRAAPTPMKKVS*WHPLCF
Trigger: GAAGCATAGAGGATGCCACAAGCTGACTTTCTTCAT...GGGCGTGGGTGCTGCCCTGGAAGCTGAGCGGAAAGTTGCCTGTGGTTGGTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR CAA 90 bp TTCCACCAACCACAGGCAACTTTCCGCTCAGCTTCCAGGGCAGCACCCACGCCCCATCAGTTCTGTTCTTaGCTTCAAGATCACCAAGGT +
Preference number: 3 (lower is better)
Translates to: FHQPQATFRSASRAAPTPHQFCS*LQDHQG
Trigger: ACCTTGGTGATCTTGAAGCAAAGAACAGAACTGATG...GGGCGTGGGTGCTGCCCTGGAAGCTGAGCGGAAAGTTGCCTGTGGTTGGTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR TCA 72 bp GGAGATGAGGACACGCTCACTACTGCAGAGACTTGGTaGGCACTAAGAGGGGAGGTAGAGGTGGTCACAATC +
Preference number: 3 (lower is better)
Translates to: GDEDTLTTAETW*ALRGEVEVVTI
Trigger: GATTGTGACCACCTCTACCTCCCCTCTTAGTGCTCACCAAGTCTCTGCAGTAGTGAGCGTGTCCTCATCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296343.10
3UTR GCA 72 bp AATTATCTGTCACCACAGACTCTGGACCCATCAACCTaGCGACGGCTGACTGCACACAGACGTCAGACAAGT +
Preference number: 3 (lower is better)
Translates to: NYLSPQTLDPST*RRLTAHRRQTS
Trigger: ACTTGTCTGACGTCTGTGTGCAGTCAGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
3UTR GCA 72 bp GGTTCCTGTCCTCACCTTAGGATGGCATCAGGGACCTaGCTGAGCTTCAAAGATCACACCTGCACCAAAAAG +
Preference number: 3 (lower is better)
Translates to: GSCPHLRMASGT*LSFKDHTCTKK
Trigger: CTTTTTGGTGCAGGTGTGATCTTTGAAGCTCAGGCAGGTCCCTGATGCCATCCTAAGGTGAGGACAGGAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
3UTR-3UTR CAA 90 bp GCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGTCACCTTGAGAACGGAGTCGGGTaGTACTTTTACTCAGAAGCA +
Preference number: 3 (lower is better)
Translates to: AHLSSSAVTWRKSWMCHLENGVG*YFYSEA
Trigger: TGCTTCTGAGTAAAAGTACAACCCGACTCCGTTCTC...AAGGTGACACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR CAA 90 bp CAAGACGGCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGCTGGGACTTGGCTTTTaGAGTCTCACTATGAACAGA +
Preference number: 3 (lower is better)
Translates to: QDGTSVLQRSDLEKELDVLGLGF*SLTMNR
Trigger: TCTGTTCATAGTGAGACTCAAAAAGCCAAGTCCCAG...CACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGCCGTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR CAA 90 bp CAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGACTCGCACTCCTTTTAGAGAACGGAGTCGGGTaGTACTTTTACTCAGAAGCA +
Preference number: 3 (lower is better)
Translates to: QSTGGTHGTSLLRLALLLENGVG*YFYSEA
Trigger: TGCTTCTGAGTAAAAGTACAACCCGACTCCGTTCTC...TAAAAGGAGTGCGAGTCTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR CAA 90 bp GAAGTGGTTCGCTCGAGGTCTCATGGCAAGTTAGAGACACAGCCACTCCACCTCCTGGGACTTGGCTTTTaGAGTCTCACTATGAACAGA +
Preference number: 3 (lower is better)
Translates to: EVVRSRSHGKLETQPLHLLGLGF*SLTMNR
Trigger: TCTGTTCATAGTGAGACTCAAAAAGCCAAGTCCCAG...GAGGTGGAGTGGCTGTGTCTCTAACTTGCCATGAGACCTCGAGCGAACCACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR TCA 72 bp TATGCTTGCGGCGTAAGGCTACAGGTGAGCCTGGCCTaGGCATCAGTTCTGTTCTTTGCTTCAAGATCACCA +
Preference number: 3 (lower is better)
Translates to: YACGVRLQVSLA*ASVLFFASRSP
Trigger: TGGTGATCTTGAAGCAAAGAACAGAACTGATGCTCAGGCCAGGCTCACCTGTAGCCTTACGCCGCAAGCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
3UTR TCA 72 bp GTTGGAGATGACAAGGGGACATTTAAGGGGAAATGTTaGGAGAGTTGCAGCGTAGAGCTGGAGCTCCAGTGG +
Preference number: 3 (lower is better)
Translates to: VGDDKGTFKGKC*ESCSVELELQW
Trigger: CCACTGGAGCTCCAGCTCTACGCTGCAACTCTCTCAACATTTCCCCTTAAATGTCCCCTTGTCATCTCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR CCA 72 bp ATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTaGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACA +
Preference number: 3 (lower is better)
Translates to: MQVKPRGEGHRR*KNLVLLSLPLT
Trigger: TGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
3UTR CCA 72 bp ACAGCAGCCCTTTCCAGTTCCTCTCCCAGTGCTGACTaGCCATTTCAACTTCCTCAAGCTAAGTGGCAAGAA +
Preference number: 3 (lower is better)
Translates to: TAALSSSSPSAD*PFQLPQAKWQE
Trigger: TTCTTGCCACTTAGCTTGAGGAAGTTGAAATGGCCAGTCAGCACTGGGAGAGGAACTGGAAAGGGCTGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
3UTR TCA 72 bp ACCCACGCCCATTTCTTTCCTACCAGCAAGCAACTATaGGAAGACATGCCCATGGGCAGAATTCAATCCCAG +
Preference number: 3 (lower is better)
Translates to: THAHFFPTSKQL*EDMPMGRIQSQ
Trigger: CTGGGATTGAATTCTGCCCATGGGCATGTCTTCTCATAGTTGCTTGCTGGTAGGAAAGAAATGGGCGTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR TCA 72 bp AAACTTGAGTTCTGTGGGGTCATTCTTAAAGCTCCCTaGAGGACCTGGGCACTTCTAGTCACAGCCCTTCAG +
Preference number: 3 (lower is better)
Translates to: KLEFCGVILKAP*RTWALLVTALQ
Trigger: CTGAAGGGCTGTGACTAGAAGTGCCCAGGTCCTTCAGGGAGCTTTAAGAATGACCCCACAGAACTCAAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR TCA 72 bp CTGTCAGCATTGTCATCCTTTGATCCTATGCTGATGTaGAACAGGCAGGACAAGACGGCACATCTGTCCTCC +
Preference number: 3 (lower is better)
Translates to: LSALSSFDPMLM*NRQDKTAHLSS
Trigger: GGAGGACAGATGTGCCGTCTTGTCCTGCCTGTTTCACATCAGCATAGGATCAAAGGATGACAATGCTGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR TCA 72 bp GTGACAGTTACACCATGCACCAGAAACCCAGAGAAGTaGAGTGGTTCGCTCGAGGTCTCATGGCAAGTTAGA +
Preference number: 3 (lower is better)
Translates to: VTVTPCTRNPEK*SGSLEVSWQVR
Trigger: TCTAACTTGCCATGAGACCTCGAGCGAACCACTTCACTTCTCTGGGTTTCTGGTGCATGGTGTAACTGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR TCA 72 bp GACAAACACAACAGGAGCAGTTGCAGACAAAGTAGCTaGGGGAGAAGACAGGAGATGAGGACACGCTCACTA +
Preference number: 3 (lower is better)
Translates to: DKHNRSSCRQSS*GRRQEMRTRSL
Trigger: TAGTGAGCGTGTCCTCATCTCCTGTCTTCTCCCTCAGCTACTTTGTCTGCAACTGCTCCTGTTGTGTTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296343.10
3UTR GCA 72 bp CTCGCGAGTAGCTGGGATTACAGGCGCCCGCCATCATaGCCAACTAGCTTTTGTATTTTTAGTAGAGACAAG +
Preference number: 3 (lower is better)
Translates to: LASSWDYRRPPS*PTSFCIFSRDK
Trigger: CTTGTCTCTACTAAAAATACAAAAGCTAGTTGGGCATGATGGCGGGCGCCTGTAATCCCAGCTACTCGCGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296343.10
3UTR CCA 72 bp GACAAGACGGCACATCTGTCCTCCAGCGCAGTGACCTaGAGAAAGAGCTGGATGTGTCACCTTTTTGTTTTT +
Preference number: 3 (lower is better)
Translates to: DKTAHLSSSAVT*RKSWMCHLFVF
Trigger: AAAAACAAAAAGGTGACACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGCCGTCTTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR CAA 90 bp TTCACAGCTGCCTCTGAGGTCTCTGAGGAGTCTAGGATAGTCAGGATTGTTCTGTGGAAGAACTTGGTCTaGCTGTCTCTTCCACTGACA +
Preference number: 3 (lower is better)
Translates to: FTAASEVSEESRIVRIVLWKNLV*LSLPLT
Trigger: TGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCA...CAGAACAATCCTGACTATCCTAGACTCCTCAGAGACCTCAGAGGCAGCTGTGAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
3UTR-3UTR CAA 90 bp GAAGTGGTTCGCTCGAGGTCTCATGGCAAGTTAGAGACACAGCCACTCCACCTCTCAGATAGTGGTAACTaGCAAAGTGCTTCCAAAACA +
Preference number: 3 (lower is better)
Translates to: EVVRSRSHGKLETQPLHLSDSGN*QSASKT
Trigger: TGTTTTGGAAGCACTTTGCAAGTTACCACTATCTGA...GAGGTGGAGTGGCTGTGTCTCTAACTTGCCATGAGACCTCGAGCGAACCACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR CCA 72 bp GGAGCAGAAGAGAAAGATGCTAGCTGCTCACAGAAGTaGGAACTGAAGCATCTAAGGCAAGTCAGATGTTGC +
Preference number: 3 (lower is better)
Translates to: GAEEKDASCSQK*ELKHLRQVRCC
Trigger: GCAACATCTGACTTGCCTTAGATGCTTCAGTTCCCACTTCTGTGAGCAGCTAGCATCTTTCTCTTCTGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR CAA 90 bp GGAGTAGGAATGAGACGATGCGTGATGAGCTCAGTGTGCCACTTACAGAGGAAGGAAAGCTCTAAATCCTaGGCAGAGAACGTCAAAAAC +
Preference number: 3 (lower is better)
Translates to: GVGMRRCVMSSVCHLQRKESSKS*AENVKN
Trigger: GTTTTTGACGTTCTCTGCCAAGGATTTAGAGCTTTC...CTTCCTCTGTAAGTGGCACACTGAGCTCATCACGCATCGTCTCATTCCTACTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR CAA 90 bp CACCCTCAATGGGAGAAGGAATTAAACTCCACCTCCTGGGAGAATTTACGTATTCACTACTGCAGAGACTaGGTGAGCACTAAGAGGGGA +
Preference number: 3 (lower is better)
Translates to: HPQWEKELNSTSWENLRIHYCRD*VSTKRG
Trigger: TCCCCTCTTAGTGCTCACCAAGTCTCTGCAGTAGTG...AATACGTAAATTCTCCCAGGAGGTGGAGTTTAATTCCTTCTCCCATTGAGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296343.10
3UTR-3UTR CAA 90 bp GCATCCTCTATGCTTCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACAAGACGCTGGAAGAACTaGGTCTTGCTGTCTCTTCCA +
Preference number: 3 (lower is better)
Translates to: ASSMLQIFQTGTPGNIGTRRWKN*VLLSLP
Trigger: TGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCT...TGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGAAGCATAGAGGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
3UTR TCA 72 bp AGAAGCTGTCAGCATTGTCATCCTTTGATCCTATGCTaGTGTGAAACAGGCAGGACAAGACGGCACATCTGT +
Preference number: 3 (lower is better)
Translates to: RSCQHCHPLILC*CETGRTRRHIC
Trigger: ACAGATGTGCCGTCTTGTCCTGCCTGTTTCACATCAGCATAGGATCAAAGGATGACAATGCTGACAGCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR CCA 72 bp GGACATTTGGGATGTGTGTCCTCTGATGATGACTGCTaGACAAACACAACAGGAGCAGTTGCAGACAAAGTA +
Preference number: 3 (lower is better)
Translates to: GHLGCVSSDDDC*TNTTGAVADKV
Trigger: TACTTTGTCTGCAACTGCTCCTGTTGTGTTTGTCCAGCAGTCATCATCAGAGGACACACATCCCAAATGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
3UTR-3UTR CAA 90 bp ACGAAAGCTCTAAATCCTTGGCAGAGAACGTCAAAAACAGCCTCATTTAAGTGGAGACGCTGGAAGAACTaGGTCTTGCTGTCTCTTCCA +
Preference number: 3 (lower is better)
Translates to: TKALNPWQRTSKTASFKWRRWKN*VLLSLP
Trigger: TGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCT...CCACTTAAATGAGGCTGTTTTTGACGTTCTCTGCCAAGGATTTAGAGCTTTCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR TCA 72 bp TCAGATGTTGCGGAGAGGAAGACACCTCATTTTAAGTaGCAGTTACACCATGCACCAGAAACCCAGAGAAGT +
Preference number: 3 (lower is better)
Translates to: SDVAERKTPHFK*QLHHAPETQRS
Trigger: ACTTCTCTGGGTTTCTGGTGCATGGTGTAACTGTCACTTAAAATGAGGTGTCTTCCTCTCCGCAACATCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR TCA 72 bp CAAGTTAGAGACACAGCCACTCCACCTCACTTTCCTTaGTGTGTGTGGTCCAGTTTGCTTTACATTATAACA +
Preference number: 3 (lower is better)
Translates to: QVRDTATPPHFP*CVWSSLLYIIT
Trigger: TGTTATAATGTAAAGCAAACTGGACCACACACATCAAGGAAAGTGAGGTGGAGTGGCTGTGTCTCTAACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR TCA 72 bp GTATTTATTTTGGTCATAATGACTGAGAACAACAAATaGCGGCCGAGGGTAGACTCCCTCTCGATTCCAATC +
Preference number: 3 (lower is better)
Translates to: VFILVIMTENNK*RPRVDSLSIPI
Trigger: GATTGGAATCGAGAGGGAGTCTACCCTCGGCCGTCATTTGTTGTTCTCAGTCATTATGACCAAAATAAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
3UTR-3UTR CAA 90 bp ACGAAAGCTCTAAATCCTTGGCAGAGAACGTCAAAAACAGCCTCATTTAAGTGGAGCTTTTCTCCAACTTaGACCAAAGAAGCTAAGGCA +
Preference number: 3 (lower is better)
Translates to: TKALNPWQRTSKTASFKWSFSPT*TKEAKA
Trigger: TGCCTTAGCTTCTTTGGTCAAAGTTGGAGAAAAGCT...CCACTTAAATGAGGCTGTTTTTGACGTTCTCTGCCAAGGATTTAGAGCTTTCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR-3UTR CAA 90 bp CACCCTCAATGGGAGAAGGAATTAAACTCCACCTCCTGGGAGAATTTACGTATTGTTGAGAACAGAAGTTaGGGAACTTACTGGAAATCA +
Preference number: 3 (lower is better)
Translates to: HPQWEKELNSTSWENLRIVENRS*GTYWKS
Trigger: TGATTTCCAGTAAGTTCCCAAACTTCTGTTCTCAAC...AATACGTAAATTCTCCCAGGAGGTGGAGTTTAATTCCTTCTCCCATTGAGGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
3UTR TCA 72 bp TTGGGAACTTACTGGAAATCAAGCTTTGGCTTCCTGTaGACTACACCAGTTTGTAACAATGAACAAAAGGGC +
Preference number: 3 (lower is better)
Translates to: LGTYWKSSFGFL*TTPVCNNEQKG
Trigger: GCCCTTTTGTTCATTGTTACAAACTGGTGTAGTTCACAGGAAGCCAAAGCTTGATTTCCAGTAAGTTCCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296343.10
3UTR GCA 72 bp ATTTCTTTCCTACCAGCAAGCAACTATGAGAAGACATaGCCATGGGCAGAATTCAATCCCAGAACAAAAATG +
Preference number: 3 (lower is better)
Translates to: ISFLPASNYEKT*PWAEFNPRTKM
Trigger: CATTTTTGTTCTGGGATTGAATTCTGCCCATGGGCATGTCTTCTCATAGTTGCTTGCTGGTAGGAAAGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR CCA 72 bp CACCCTCAATGGGAGAAGGAATTAAACTCCACCTCCTaGGAGAATTTACGTATTTTGTTTAGAATTCTTCTG +
Preference number: 3 (lower is better)
Translates to: HPQWEKELNSTS*ENLRILFRILL
Trigger: CAGAAGAATTCTAAACAAAATACGTAAATTCTCCCAGGAGGTGGAGTTTAATTCCTTCTCCCATTGAGGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296343.10
3UTR GCA 72 bp GAACAGATAAACATTACCAGGCTACACAGAGTTAAGTaGATAATTGGCATAAAGGCTCTTGTTATCCCAAGA +
Preference number: 3 (lower is better)
Translates to: EQINITRLHRVK*IIGIKALVIPR
Trigger: TCTTGGGATAACAAGAGCCTTTATGCCAATTATGCACTTAACTCTGTGTAGCCTGGTAATGTTTATCTGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR TCA 72 bp TGGAAAATATTTGTCTTCCACTCTTCTGCTATGTCTTaGATCTTGTCTCCACCTGGTAAGCAAACTATGTTT +
Preference number: 3 (lower is better)
Translates to: WKIFVFHSSAMS*ILSPPGKQTMF
Trigger: AAACATAGTTTGCTTACCAGGTGGAGACAAGATTCAAGACATAGCAGAAGAGTGGAAGACAAATATTTTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
3UTR TCA 72 bp TTTCTCATGATTAGACTGAGGTTATGGGTTTCTGAATaGATGTCAGGGAAGATGTACCCCTTTCATTGTATT +
Preference number: 3 (lower is better)
Translates to: FLMIRLRLWVSE*MSGKMYPFHCI
Trigger: AATACAATGAAAGGGGTACATCTTCCCTGACATTCATTCAGAAACCCATAACCTCAGTCTAATCATGAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296343.10
3UTR GCA 72 bp TTCTTTCCCTTTACTTACAGAAAGAACACTATCACCTaGCTTCATTTAGAAGGAATTCTCTTCAGTGCATTC +
Preference number: 3 (lower is better)
Translates to: FFPFTYRKNTIT*LHLEGILFSAF
Trigger: GAATGCACTGAAGAGAATTCCTTCTAAATGAAGGCAGGTGATAGTGTTCTTTCTGTAAGTAAAGGGAAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCGGCCGACCGCTCCTCTaGGTAAGCGCTCCTTCAGCG +
Preference number: 4 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGAGRPLL*VSAPSA
Trigger: CGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCC...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCATGGACGCATCGATCTaGGCCAGGAGGCGGGGGTTG +
Preference number: 4 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGAMDASI*ARRRGL
Trigger: CAACCCCCGCCTCCTGGCTCAGATCGATGCGTCCAT...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCGCCCCTCTGAGAAGCTaGACCTGCGGAGGACACTGG +
Preference number: 4 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGAAPLRS*TCGGHW
Trigger: CCAGTGTCCTCCGCAGGTCCAGCTTCTCAGAGGGGC...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp CAAGACGGCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGCCGGTGGGCTCCGGGTaGTGCGCTACACCCGGGCGG +
Preference number: 4 (lower is better)
Translates to: QDGTSVLQRSDLEKELDVPVGSG*CATPGR
Trigger: CCGCCCGGGTGTAGCGCATCACCCGGAGCCCACCGG...CACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGCCGTCTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR GCA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCGCTGCTGACCCAGGATaGCTCTATGGGGCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGAAADPG*LYGAGQ
Trigger: CTGACCAGCCCCATAGAGGCATCCTGGGTCAGCAGC...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCATTCCTGGGGCCTCCTaGAGCTCCCCTGGAGGCAAT +
Preference number: 4 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGAIPGAS*SSPGGN
Trigger: ATTGCCTCCAGGGGAGCTCCAGGAGGCCCCAGGAAT...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000413360.5
CDS-3UTR TCA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCGGGGCTTGGATGGTTTaGTCCTCTGCTGGTGAGACG +
Preference number: 4 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGAGAWMV*SSAGET
Trigger: CGTCTCACCAGCAGAGGATCAAACCATCCAAGCCCC...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp TTCAAAGAGTGGCTCAGTTCTGCAACAGGTGTGACCCGGCCCGGAGGGAGGGCTGTTCTGCAACAGGTGTaGCCCGGCCCGGAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: FKEWLSSATGVTRPGGRAVLQQV*PGPEGG
Trigger: CCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAAC...AGCCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCTTTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp CAAGACGGCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGCCGCATCCGGGGCGGTaGGGCCGCCTCTTCGCCCAA +
Preference number: 4 (lower is better)
Translates to: QDGTSVLQRSDLEKELDVPHPGR*GRLFAQ
Trigger: TTGGGCGAAGAGGCGGCCTCACCGCCCCGGATGCGG...CACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGCCGTCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR GCA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCTGCTCTGCATGTCCCTaGAAAGCCGCTCCAAGCCAC +
Preference number: 4 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGACSACP*KAAPSH
Trigger: GTGGCTTGGAGCGGCTTTGCAGGGACATGCAGAGCA...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCCTGGCGCCTCACGTATaGTTGCGGCGTAAGGCTACA +
Preference number: 4 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGALAPHV*LRRKAT
Trigger: TGTAGCCTTACGCCGCAAGCATACGTGAGGCGCCAG...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCGGAAGGACCCAGCTCTaGTGCAGGAAGGGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGAGRTQL*CRKGRE
Trigger: TTCTCTCCCCTTCCTGCAGCAGAGCTGGGTCCTTCC...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCCCATCAGCACTGCTCTaGTCGTTCTCGTGCACGCTG +
Preference number: 4 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGAPSALL*SFSCTL
Trigger: CAGCGTGCACGAGAACGACCAGAGCAGTGCTGATGG...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCAGGGCTGTCAGGCTCTaGCTCTTTGTCACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGARAVRL*LFVTRS
Trigger: GCTCCTGGTGACAAAGAGCCAGAGCCTGACAGCCCT...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCCTTCAGCGACAGAGCTaGCGCCTCACGTATGCTTGC +
Preference number: 4 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGALQRQS*RLTYAC
Trigger: GCAAGCATACGTGAGGCGCCAGCTCTGTCGCTGAAG...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
3UTR CAA 72 bp GCTCCTTCAGCGACAGAGCTGGCGCCTCACGTATGCTaGCGGCGTAAGGCTACAGGTGAGCCTGGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: APSATELAPHVC*RRKATGEPGLS
Trigger: GCTCAGGCCAGGCTCACCTGTAGCCTTACGCCGCAAGCATACGTGAGGCGCCAGCTCTGTCGCTGAAGGAGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCAGCATGGCCGTGACATaGGCGTCACTTAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGASMAVT*ASLSRK
Trigger: CTTCCTGCTAAGTGACGCTCATGTCACGGCCATGCT...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp TTCCACCAACCACAGGCAACTTTCCGCTCAGCTTCCAGGGCAGCACCCACGCCCATGGGCAGGAGCTTCTaGGGGGCATCATGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: FHQPQATFRSASRAAPTPMGRSF*GASCSG
Trigger: CCCGGAGCATGATGCCCCTCAGAAGCTCCTGCCCAT...GGGCGTGGGTGCTGCCCTGGAAGCTGAGCGGAAAGTTGCCTGTGGTTGGTGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCTGGCACCATCAGCACTaGTCTGGTCGTTCTCGTGCA +
Preference number: 4 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGAWHHQH*SGRSRA
Trigger: TGCACGAGAACGACCAGAGCAGTGCTGATGGTGCCA...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCTGCTCTCGGCATTGCTaGTGTGACTCTGACAGCTGG +
Preference number: 4 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGACSRHC*CDSDSW
Trigger: CCAGCTGTCAGAGTCACAGCAGCAATGCCGAGAGCA...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp TTCAAAGAGTGGCTCAGTTCTGCAACAGGTGTGACCCGGCCCGGAGGGAGGGCTAGCAGGGGCCGGAGCTaGGCTGAGAGGCAGTGGTAC +
Preference number: 4 (lower is better)
Translates to: FKEWLSSATGVTRPGGRASRGRS*AERQWY
Trigger: GTACCACTGCCTCTCAGCCCAGCTCCGGCCCCTGCT...AGCCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCTTTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCTTGGGCACGGATTGGTaGAGGCTAGAGAAGGACCCA +
Preference number: 4 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGALGTDW*RLEKDP
Trigger: TGGGTCCTTCTCTAGCCTCCACCAATCCGTGCCCAA...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCTGTCACCACAGACTCTaGACCCATCAACCTGCCGAC +
Preference number: 4 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGACHHRL*THQPAD
Trigger: GTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACA...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCCACGATCTAAAGGGATaGGGTGCGGTTGAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGAHDLKG*GAVEGA
Trigger: AGCTCCCTCAACCGCACCCCATCCCTTTAGATCGTG...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp CAGGACAGGGAGAGGGAAAACGCCATCCCCGTTTCAGCAGCAGGAGAGGTGGTTCTCCACGTGAAGGGCTaGGTGGGGACTGAGCCACCG +
Preference number: 4 (lower is better)
Translates to: QDRERENAIPVSAAGEVVLHVKG*VGTEPP
Trigger: CGGTGGCTCAGTCCCCACTCAGCCCTTCACGTGGAG...AACCACCTCTCCTGCTGCTGAAACGGGGATGGCGTTTTCCCTCTCCCTGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp TTCAAAGAGTGGCTCAGTTCTGCAACAGGTGTGACCCGGCCCGGAGGGAGGGCTATGGACGCATCGATCTaGGCCAGGAGGCGGGGGTTG +
Preference number: 4 (lower is better)
Translates to: FKEWLSSATGVTRPGGRAMDASI*ARRRGL
Trigger: CAACCCCCGCCTCCTGGCTCAGATCGATGCGTCCAT...AGCCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCTTTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCCATCAGGGACCTGCCTaGGCTTCAAAGATCACACCT +
Preference number: 4 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGAHQGPA*ASKITP
Trigger: AGGTGTGATCTTTGAAGCTCAGGCAGGTCCCTGATG...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCACCAGCAAGCAACTATaGGAAGACATGCCCATGGGC +
Preference number: 4 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGATSKQL*EDMPMG
Trigger: GCCCATGGGCATGTCTTCTCATAGTTGCTTGCTGGT...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp CAGGACAGGGAGAGGGAAAACGCCATCCCCGTTTCAGCAGCAGGAGAGGTGGTTGAGGCTGCGTTGCGGTaGGCGCGAAAGGCTCGTGTG +
Preference number: 4 (lower is better)
Translates to: QDRERENAIPVSAAGEVVEAALR*ARKARV
Trigger: CACACGAGCCTTTCGCGCCCACCGCAACGCAGCCTC...AACCACCTCTCCTGCTGCTGAAACGGGGATGGCGTTTTCCCTCTCCCTGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273582.9
CDS-3UTR CCA 90 bp CAGGACAGGGAGAGGGAAAACGCCATCCCCGTTTCAGCAGCAGGAGAGGTGGTTAGCAGGGGCCGGAGCTaGGCTGAGAGGCAGTGGTAC +
Preference number: 4 (lower is better)
Translates to: QDRERENAIPVSAAGEVVSRGRS*AERQWY
Trigger: GTACCACTGCCTCTCAGCCCAGCTCCGGCCCCTGCT...AACCACCTCTCCTGCTGCTGAAACGGGGATGGCGTTTTCCCTCTCCCTGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp TTCAAAGAGTGGCTCAGTTCTGCAACAGGTGTGACCCGGCCCGGAGGGAGGGCTTGTGACTCTGACAGCTaGCAGTCCGGCCTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: FKEWLSSATGVTRPGGRACDSDS*QSGLGG
Trigger: ACCCCCGAGGCCGGACTGCCAGCTGTCAGAGTCACA...AGCCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCTTTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp GTGAAAGTCTACTCGGTCTTGCCCGGAGCTACCCAGGACCACAGCCAGCACCAGCCGCCTCAGCAGACGTaGAGTGCAGGAAGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: VKVYSVLPGATQDHSQHQPPQQT*SAGSSG
Trigger: CCCACTGCTTCCTGCACTCCACGTCTGCTGAGGCGG...CTGGTGCTGGCTGTGGTCCTGGGTAGCTCCGGGCAAGACCGAGTAGACTTTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCCTCTGTCAGGTGGCCTaGGACTGTGTCAAAGGAATC +
Preference number: 4 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGALCQVA*DCVKGI
Trigger: GATTCCTTTGACACAGTCCCAGGCCACCTGACAGAG...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCTTCAGTGAGTACAGGTaGAGGTCCTCTGTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGAFSEYR*RSSVRW
Trigger: CCACCTGACAGAGGACCTCCACCTGTACTCACTGAA...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp TTCAAAGAGTGGCTCAGTTCTGCAACAGGTGTGACCCGGCCCGGAGGGAGGGCTCCGAATCACGTGAGCTaGACTGGGAGCTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: FKEWLSSATGVTRPGGRAPNHVS*TGSCWR
Trigger: CCTCCAGCAGCTCCCAGTTCAGCTCACGTGATTCGG...AGCCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCTTTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp CAGGACAGGGAGAGGGAAAACGCCATCCCCGTTTCAGCAGCAGGAGAGGTGGTTATGGGCAGGAGCTTCTaGGGGGCATCATGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: QDRERENAIPVSAAGEVVMGRSF*GASCSG
Trigger: CCCGGAGCATGATGCCCCTCAGAAGCTCCTGCCCAT...AACCACCTCTCCTGCTGCTGAAACGGGGATGGCGTTTTCCCTCTCCCTGTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp AGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGGCGTTCTGCAACAGGTGTaGCCCGGCCCGGAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: RPQTLEELGLAVSSTDRGVLQQV*PGPEGG
Trigger: CCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAAC...GCCTCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCTGGACGAAATGCCCATaGCGTAGTCCTATTCTCTGC +
Preference number: 4 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGAWTKCP*RSPILC
Trigger: GCAGAGAATAGGACTACGTCATGGGCATTTCGTCCA...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCGTTGTTCTGTTCCACTaGTTCCAGGCACTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGAVVLFH*FQALQH
Trigger: ATGCTGCAGTGCCTGGAAGCAGTGGAACAGAACAAC...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp CAGGACAGGGAGAGGGAAAACGCCATCCCCGTTTCAGCAGCAGGAGAGGTGGTTGCCCGGAGGGAGGGCTaGACGTGCTTTCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: QDRERENAIPVSAAGEVVARREG*TCFLQV
Trigger: CACCTGAAGAAAGCACGTGCAGCCCTCCCTCCGGGC...AACCACCTCTCCTGCTGCTGAAACGGGGATGGCGTTTTCCCTCTCCCTGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp CAAGACGGCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGGCCAGTGCTCCCTCCTaGTCTCCTCAGGCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: QDGTSVLQRSDLEKELDVASAPS*SPQAGA
Trigger: AGCGCCTGCCTGAGGAGAGCAGGAGGGAGCACTGGC...CACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGCCGTCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CCA 90 bp CAAGACGGCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGCAGCGCAGCTGTAGGTaGAGGAGCGTGCCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: QDGTSVLQRSDLEKELDVQRSCR*RSVPGR
Trigger: CCTCCCTGGCACGCTCCTCCACCTACAGCTGCGCTG...CACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGCCGTCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273582.9
CDS-3UTR CCA 90 bp TTCCACCAACCACAGGCAACTTTCCGCTCAGCTTCCAGGGCAGCACCCACGCCCCCATCAGCACTGCTCTaGTCGTTCTCGTGCACGCTG +
Preference number: 4 (lower is better)
Translates to: FHQPQATFRSASRAAPTPPSALL*SFSCTL
Trigger: CAGCGTGCACGAGAACGACCAGAGCAGTGCTGATGG...GGGCGTGGGTGCTGCCCTGGAAGCTGAGCGGAAAGTTGCCTGTGGTTGGTGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp GTGAAAGTCTACTCGGTCTTGCCCGGAGCTACCCAGGACCACAGCCAGCACCAGCCGTGCTCAGCCTCCTaGTACATGGGGAGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: VKVYSVLPGATQDHSQHQPCSAS*YMGSRF
Trigger: GAACCTGCTCCCCATGTACCAGGAGGCTGAGCACGG...CTGGTGCTGGCTGTGGTCCTGGGTAGCTCCGGGCAAGACCGAGTAGACTTTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCCAGTGGGAGAAGGACTaGGAGGAAACGAAGGATTTG +
Preference number: 4 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGAQWEKD*EETKDL
Trigger: CAAATCCTTCGTTTCCTCCCAGTCCTTCTCCCACTG...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp CAGGACAGGGAGAGGGAAAACGCCATCCCCGTTTCAGCAGCAGGAGAGGTGGTTCCGCCTCAGCAGACGTaGAGTGCAGGAAGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: QDRERENAIPVSAAGEVVPPQQT*SAGSSG
Trigger: CCCACTGCTTCCTGCACTCCACGTCTGCTGAGGCGG...AACCACCTCTCCTGCTGCTGAAACGGGGATGGCGTTTTCCCTCTCCCTGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp TTCCACCAACCACAGGCAACTTTCCGCTCAGCTTCCAGGGCAGCACCCACGCCCAGCATGGCCGTGACATaGGCGTCACTTAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: FHQPQATFRSASRAAPTPSMAVT*ASLSRK
Trigger: CTTCCTGCTAAGTGACGCTCATGTCACGGCCATGCT...GGGCGTGGGTGCTGCCCTGGAAGCTGAGCGGAAAGTTGCCTGTGGTTGGTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp TTCAAAGAGTGGCTCAGTTCTGCAACAGGTGTGACCCGGCCCGGAGGGAGGGCTGGGGCTTGGATGGTTTaGTCCTCTGCTGGTGAGACG +
Preference number: 4 (lower is better)
Translates to: FKEWLSSATGVTRPGGRAGAWMV*SSAGET
Trigger: CGTCTCACCAGCAGAGGATCAAACCATCCAAGCCCC...AGCCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCTTTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp TTCAAAGAGTGGCTCAGTTCTGCAACAGGTGTGACCCGGCCCGGAGGGAGGGCTCTGTGCCGAATCACGTaGGCTGAACTGGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: FKEWLSSATGVTRPGGRALCRIT*AELGAA
Trigger: AGCAGCTCCCAGTTCAGCTCACGTGATTCGGCACAG...AGCCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCTTTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCCCAGTCGGCAAGTCTTaGACATGTTCTTCATGTGAC +
Preference number: 4 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGAPVGKS*TCSSCD
Trigger: GTCACATGAAGAACATGTTCAAGACTTGCCGACTGG...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp CAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGACTCGCACTCCTTTTAGTTCTGCAACAGGTGTaGCCCGGCCCGGAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: QSTGGTHGTSLLRLALLLVLQQV*PGPEGG
Trigger: CCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAAC...TAAAAGGAGTGCGAGTCTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCGCTGGGCTGCCATTGTaGATCAATGGTCCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGAAGLPL*INGPCF
Trigger: AAAACAAGGACCATTGATTCACAATGGCAGCCCAGC...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR GCA 90 bp TTCCACCAACCACAGGCAACTTTCCGCTCAGCTTCCAGGGCAGCACCCACGCCCGTGAGACGTGCCCTCTaGTTTCTTGAGGTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: FHQPQATFRSASRAAPTPVRRAL*FLEVSG
Trigger: CCCGGAAACCTCAAGAAAGCAGAGGGCACGTCTCAC...GGGCGTGGGTGCTGCCCTGGAAGCTGAGCGGAAAGTTGCCTGTGGTTGGTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp TTCAAAGAGTGGCTCAGTTCTGCAACAGGTGTGACCCGGCCCGGAGGGAGGGCTTTCTTGGTGCGGATTTaGTGGCGCCGAAGGCGGATC +
Preference number: 4 (lower is better)
Translates to: FKEWLSSATGVTRPGGRAFLVRI*WRRRRI
Trigger: GATCCGCCTTCGGCGCCAGCAAATCCGCACCAAGAA...AGCCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCTTTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp TTCAAAGAGTGGCTCAGTTCTGCAACAGGTGTGACCCGGCCCGGAGGGAGGGCTGGAGCAGGTTCTTGGTaGGGATTTGCTGGCGCCGAA +
Preference number: 4 (lower is better)
Translates to: FKEWLSSATGVTRPGGRAGAGSW*GFAGAE
Trigger: TTCGGCGCCAGCAAATCCGCACCAAGAACCTGCTCC...AGCCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCTTTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp GTGAAAGTCTACTCGGTCTTGCCCGGAGCTACCCAGGACCACAGCCAGCACCAGGAGGCGGCTGGAAGCTaGATCCCCTCAAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: VKVYSVLPGATQDHSQHQEAAGS*IPSNCF
Trigger: GAAGCAGTTTGAGGGGATGCAGCTTCCAGCCGCCTC...CTGGTGCTGGCTGTGGTCCTGGGTAGCTCCGGGCAAGACCGAGTAGACTTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR GCA 90 bp CAGGACAGGGAGAGGGAAAACGCCATCCCCGTTTCAGCAGCAGGAGAGGTGGTTCAGGGTCAGTCCGGATaGCACATCCTGCACAGCGGT +
Preference number: 4 (lower is better)
Translates to: QDRERENAIPVSAAGEVVQGQSG*HILHSG
Trigger: ACCGCTGTGCAGGATGTGGCATCCGGACTGACCCTG...AACCACCTCTCCTGCTGCTGAAACGGGGATGGCGTTTTCCCTCTCCCTGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp CAGGACAGGGAGAGGGAAAACGCCATCCCCGTTTCAGCAGCAGGAGAGGTGGTTAGGGAGGGCTGCACGTaGTTTCTTCAGGTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: QDRERENAIPVSAAGEVVREGCT*FLQVAS
Trigger: GGAGGCCACCTGAAGAAAGCACGTGCAGCCCTCCCT...AACCACCTCTCCTGCTGCTGAAACGGGGATGGCGTTTTCCCTCTCCCTGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp TTCAAAGAGTGGCTCAGTTCTGCAACAGGTGTGACCCGGCCCGGAGGGAGGGCTAGAGTGGCTCAGTTCTaGAACAGGTGTGACCCGGCC +
Preference number: 4 (lower is better)
Translates to: FKEWLSSATGVTRPGGRARVAQF*NRCDPA
Trigger: GGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCT...AGCCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCTTTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp AGAAGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGACCGCCGCCTGGGCTaGGGCTTCTATCCCGGCCAC +
Preference number: 4 (lower is better)
Translates to: RRPQTLEELGLAVSSTDRDRRLG*GFYPGH
Trigger: GTGGCCGGGATAGAAGCCGCAGCCCAGGCGGCGGTC...TCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CCA 90 bp CTAAGAGGGGAGGTAGAGGTGGTCACAATCCCGCCCCTCATGCCACAGTGTGCTTGGGCTGAGAGGCAGTaGTACTGCAGGCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LRGEVEVVTIPPLMPQCAWAERQ*YCRLCC
Trigger: GCAGCACAGCCTGCAGTACCACTGCCTCTCAGCCCA...AGCACACTGTGGCATGAGGGGCGGGATTGTGACCACCTCTACCTCCCCTCTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CCA 90 bp TTCAAAGAGTGGCTCAGTTCTGCAACAGGTGTGACCCGGCCCGGAGGGAGGGCTCCCAGGATGCCTCTATaGGGCTGGTCAGAGTACTGG +
Preference number: 4 (lower is better)
Translates to: FKEWLSSATGVTRPGGRAPRMPL*GWSEYW
Trigger: CCAGTACTCTGACCAGCCCCATAGAGGCATCCTGGG...AGCCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCTTTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp CAGGACAGGGAGAGGGAAAACGCCATCCCCGTTTCAGCAGCAGGAGAGGTGGTTATTCCTGGGGCCTCCTaGAGCTCCCCTGGAGGCAAT +
Preference number: 4 (lower is better)
Translates to: QDRERENAIPVSAAGEVVIPGAS*SSPGGN
Trigger: ATTGCCTCCAGGGGAGCTCCAGGAGGCCCCAGGAAT...AACCACCTCTCCTGCTGCTGAAACGGGGATGGCGTTTTCCCTCTCCCTGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000413360.5
CDS-3UTR CCA 90 bp GTGAAAGTCTACTCGGTCTTGCCCGGAGCTACCCAGGACCACAGCCAGCACCAGGCAGTGAGTCAGGAATaGGCAGGAGCTTCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: VKVYSVLPGATQDHSQHQAVSQE*AGASEG
Trigger: CCCCTCAGAAGCTCCTGCCCATTCCTGACTCACTGC...CTGGTGCTGGCTGTGGTCCTGGGTAGCTCCGGGCAAGACCGAGTAGACTTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp AGAAGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAACTCCAGGCTCTGCCTaGCCAGTGCCTCCCGCCGGG +
Preference number: 4 (lower is better)
Translates to: RRPQTLEELGLAVSSTDRTPGSA*PVPPAG
Trigger: CCCGGCGGGAGGCACTGGCCAGGCAGAGCCTGGAGT...TCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp TTCAAAGAGTGGCTCAGTTCTGCAACAGGTGTGACCCGGCCCGGAGGGAGGGCTCAGCAGCAGGAGAGGTaGTTGAGAAAGGCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: FKEWLSSATGVTRPGGRAQQQER*LRKAWL
Trigger: GAGCCAGGCCTTTCTCAACCACCTCTCCTGCTGCTG...AGCCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCTTTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp TTCAAAGAGTGGCTCAGTTCTGCAACAGGTGTGACCCGGCCCGGAGGGAGGGCTCTTCAGCGACAGAGCTaGCGCCTCACGTATGCTTGC +
Preference number: 4 (lower is better)
Translates to: FKEWLSSATGVTRPGGRALQRQS*RLTYAC
Trigger: GCAAGCATACGTGAGGCGCCAGCTCTGTCGCTGAAG...AGCCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCTTTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCAGCTGCTCACAGAAGTaGGAACTGAAGCATCTAAGG +
Preference number: 4 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGASCSQK*ELKHLR
Trigger: CCTTAGATGCTTCAGTTCCCACTTCTGTGAGCAGCT...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp TTCCACCAACCACAGGCAACTTTCCGCTCAGCTTCCAGGGCAGCACCCACGCCCATTCTGGAGCTCCCCTaGAGGCAATGCTGGTATCCG +
Preference number: 4 (lower is better)
Translates to: FHQPQATFRSASRAAPTPILELP*RQCWYP
Trigger: CGGATACCAGCATTGCCTCCAGGGGAGCTCCAGAAT...GGGCGTGGGTGCTGCCCTGGAAGCTGAGCGGAAAGTTGCCTGTGGTTGGTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR TCA 90 bp GCCACCGTGCCTGGCCAACACTTCTTGAGTGAAAGTCTACTCGGTCTTGCCCGGGGGGCTTGGATGGTTTaGTCCTCTGCTGGTGAGACG +
Preference number: 4 (lower is better)
Translates to: ATVPGQHFLSESLLGLARGAWMV*SSAGET
Trigger: CGTCTCACCAGCAGAGGATCAAACCATCCAAGCCCC...CCGGGCAAGACCGAGTAGACTTTCACTCAAGAAGTGTTGGCCAGGCACGGTGGC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR TCA 90 bp GAAGTGGTTCGCTCGAGGTCTCATGGCAAGTTAGAGACACAGCCACTCCACCTCGAGTGTCTGCCCCTCTaGGAAGCTGGACCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: EVVRSRSHGKLETQPLHLECLPL*EAGPAE
Trigger: CTCCGCAGGTCCAGCTTCTCAGAGGGGCAGACACTC...GAGGTGGAGTGGCTGTGTCTCTAACTTGCCATGAGACCTCGAGCGAACCACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp AGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGGCGAGTGTCTGCCCCTCTaGGAAGCTGGACCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: RPQTLEELGLAVSSTDRGECLPL*EAGPAE
Trigger: CTCCGCAGGTCCAGCTTCTCAGAGGGGCAGACACTC...GCCTCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp ATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTCCAGTTCCTCTCCCAGGAGTGTCTGCCCCTCTaGGAAGCTGGACCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: IWLLSRLRNSSPFQFLSQECLPL*EAGPAE
Trigger: CTCCGCAGGTCCAGCTTCTCAGAGGGGCAGACACTC...CTGGGAGAGGAACTGGAAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR TCA 90 bp GTGAAAGTCTACTCGGTCTTGCCCGGAGCTACCCAGGACCACAGCCAGCACCAGGAGAGCTGGGTGTGCTaGCTTCACTGCTTTGACCAG +
Preference number: 4 (lower is better)
Translates to: VKVYSVLPGATQDHSQHQESWVC*LHCFDQ
Trigger: CTGGTCAAAGCAGTGAAGTCAGCACACCCAGCTCTC...CTGGTGCTGGCTGTGGTCCTGGGTAGCTCCGGGCAAGACCGAGTAGACTTTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR TCA 90 bp CAGGACAGGGAGAGGGAAAACGCCATCCCCGTTTCAGCAGCAGGAGAGGTGGTTCGCAGCAGCCGGACTTaGTTGAGCAGCTTGACCTTC +
Preference number: 4 (lower is better)
Translates to: QDRERENAIPVSAAGEVVRSSRT*LSSLTF
Trigger: GAAGGTCAAGCTGCTCAATCAAGTCCGGCTGCTGCG...AACCACCTCTCCTGCTGCTGAAACGGGGATGGCGTTTTCCCTCTCCCTGTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp TTCCACCAACCACAGGCAACTTTCCGCTCAGCTTCCAGGGCAGCACCCACGCCCTACCTGACATGCAGGTaGAACCTAGAGGAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: FHQPQATFRSASRAAPTPYLTCR*NLEEKA
Trigger: GGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTA...GGGCGTGGGTGCTGCCCTGGAAGCTGAGCGGAAAGTTGCCTGTGGTTGGTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp AGAAGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGACCTCGGGGCACAGTCTaGCCCCAGTCCAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: RRPQTLEELGLAVSSTDRPRGTV*PQSRTG
Trigger: CCCTGTCCTGGACTGGGGTCAGACTGTGCCCCGAGG...TCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTCCGGTGGGCTCCGGGTaGTGCGCTACACCCGGGCGG +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTPVGSG*CATPGR
Trigger: CCGCCCGGGTGTAGCGCATCACCCGGAGCCCACCGG...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR TCA 90 bp CAAGACGGCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGATGGTCCCAATCTCTTaGCCTCGTGATCCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: QDGTSVLQRSDLEKELDVMVPIS*PRDPPA
Trigger: GGCGGGCGGATCACGAGGTCAAGAGATTGGGACCAT...CACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGCCGTCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR GCA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGCCTGCCTCCCGAGGCTaGGTTGCGGTGGGCGCGAAA +
Preference number: 4 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKPASRG*VAVGAK
Trigger: TTTCGCGCCCACCGCAACGCAGCCTCGGGAGGCAGG...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273582.9
CDS-3UTR GCA 90 bp TTCAAAGAGTGGCTCAGTTCTGCAACAGGTGTGACCCGGCCCGGAGGGAGGGCTGTGAGACGTGCCCTCTaGTTTCTTGAGGTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: FKEWLSSATGVTRPGGRAVRRAL*FLEVSG
Trigger: CCCGGAAACCTCAAGAAAGCAGAGGGCACGTCTCAC...AGCCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCTTTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp CAGGACAGGGAGAGGGAAAACGCCATCCCCGTTTCAGCAGCAGGAGAGGTGGTTGGAGCAGGTTCTTGGTaGGGATTTGCTGGCGCCGAA +
Preference number: 4 (lower is better)
Translates to: QDRERENAIPVSAAGEVVGAGSW*GFAGAE
Trigger: TTCGGCGCCAGCAAATCCGCACCAAGAACCTGCTCC...AACCACCTCTCCTGCTGCTGAAACGGGGATGGCGTTTTCCCTCTCCCTGTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp TTCAAAGAGTGGCTCAGTTCTGCAACAGGTGTGACCCGGCCCGGAGGGAGGGCTACCCGAAAGCTTCCGTaGTCAGCCTCCTGGTACATG +
Preference number: 4 (lower is better)
Translates to: FKEWLSSATGVTRPGGRATRKLP*SASWYM
Trigger: CATGTACCAGGAGGCTGAGCACGGAAGCTTTCGGGT...AGCCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCTTTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp GCCACCGTGCCTGGCCAACACTTCTTGAGTGAAAGTCTACTCGGTCTTGCCCGGGGGCCCACTCCAAGTTaGCACGAACACGAATCCGCA +
Preference number: 4 (lower is better)
Translates to: ATVPGQHFLSESLLGLARGPTPS*HEHESA
Trigger: TGCGGATTCGTGTTCGTGGCAACTTGGAGTGGGCCC...CCGGGCAAGACCGAGTAGACTTTCACTCAAGAAGTGTTGGCCAGGCACGGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR GCA 90 bp CAAGACGGCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGCACATGGGTAGCCCCTaGCCTGGTGAGCTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: QDGTSVLQRSDLEKELDVHMGSP*PGELSK
Trigger: CTTGCTGAGCTCACCAGGGCAGGGGCTACCCATGTG...CACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGCCGTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCAGGAATTCTCTTCAGTaGATTCAAAGCTTCTCCCCG +
Preference number: 4 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGARNSLQ*IQSFSP
Trigger: CGGGGAGAAGCTTTGAATGCACTGAAGAGAATTCCT...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp CAAGACGGCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGCCCAGCAACTGCCAGTaGTCCCTCCTGCTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: QDGTSVLQRSDLEKELDVPSNCQ*SLLLSS
Trigger: TGAGGAGAGCAGGAGGGAGCACTGGCAGTTGCTGGG...CACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGCCGTCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR GCA 90 bp GTGAAAGTCTACTCGGTCTTGCCCGGAGCTACCCAGGACCACAGCCAGCACCAGATGATCTCGGCTCACTaGAACCTCCGCCTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: VKVYSVLPGATQDHSQHQMISAH*NLRLLD
Trigger: ATCCAGGAGGCGGAGGTTGCAGTGAGCCGAGATCAT...CTGGTGCTGGCTGTGGTCCTGGGTAGCTCCGGGCAAGACCGAGTAGACTTTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp GCCACCGTGCCTGGCCAACACTTCTTGAGTGAAAGTCTACTCGGTCTTGCCCGGCCCAGGATGCCTCTATaGGGCTGGTCAGAGTACTGG +
Preference number: 4 (lower is better)
Translates to: ATVPGQHFLSESLLGLARPRMPL*GWSEYW
Trigger: CCAGTACTCTGACCAGCCCCATAGAGGCATCCTGGG...CCGGGCAAGACCGAGTAGACTTTCACTCAAGAAGTGTTGGCCAGGCACGGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp GCCACCGTGCCTGGCCAACACTTCTTGAGTGAAAGTCTACTCGGTCTTGCCCGGCCTGGGGAATCATTCTaGCTGCTGACCCAGGATGCC +
Preference number: 4 (lower is better)
Translates to: ATVPGQHFLSESLLGLARPGESF*LLTQDA
Trigger: GGCATCCTGGGTCAGCAGCCAGAATGATTCCCCAGG...CCGGGCAAGACCGAGTAGACTTTCACTCAAGAAGTGTTGGCCAGGCACGGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp GAAGTGGTTCGCTCGAGGTCTCATGGCAAGTTAGAGACACAGCCACTCCACCTCACCTGCGGAGGACACTaGACAGCTGGCTCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: EVVRSRSHGKLETQPLHLTCGGH*TAGSPH
Trigger: GTGGGGAGAGCCAGCTGTCCAGTGTCCTCCGCAGGT...GAGGTGGAGTGGCTGTGTCTCTAACTTGCCATGAGACCTCGAGCGAACCACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp ATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTCCAGTTCCTCTCCCAGACCTGCGGAGGACACTaGACAGCTGGCTCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: IWLLSRLRNSSPFQFLSQTCGGH*TAGSPH
Trigger: GTGGGGAGAGCCAGCTGTCCAGTGTCCTCCGCAGGT...CTGGGAGAGGAACTGGAAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp AGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGGCGCCCCTCTGAGAAGCTaGACCTGCGGAGGACACTGG +
Preference number: 4 (lower is better)
Translates to: RPQTLEELGLAVSSTDRGAPLRS*TCGGHW
Trigger: CCAGTGTCCTCCGCAGGTCCAGCTTCTCAGAGGGGC...GCCTCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp GCCACCGTGCCTGGCCAACACTTCTTGAGTGAAAGTCTACTCGGTCTTGCCCGGCAGCCTCCTGGTACATaGGGAGCAGGTTCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: ATVPGQHFLSESLLGLARQPPGT*GAGSWC
Trigger: GCACCAAGAACCTGCTCCCCATGTACCAGGAGGCTG...CCGGGCAAGACCGAGTAGACTTTCACTCAAGAAGTGTTGGCCAGGCACGGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp AGTGGACGAAATGCCCATGACGTAGTCCTATTCTCTGCTGCTTCTCCTCGGGGCCCGCCTCAGCAGACGTaGAGTGCAGGAAGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: SGRNAHDVVLFSAASPRGPPQQT*SAGSSG
Trigger: CCCACTGCTTCCTGCACTCCACGTCTGCTGAGGCGG...GCCCCGAGGAGAAGCAGCAGAGAATAGGACTACGTCATGGGCATTTCGTCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp CAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGACTCGCACTCCTTTTAGCTTCAGGAGCCCCATaGCCACCGCCTCAGCAGACG +
Preference number: 4 (lower is better)
Translates to: QSTGGTHGTSLLRLALLLASGAP*PPPQQT
Trigger: CGTCTGCTGAGGCGGTGGCCATGGGGCTCCTGAAGC...TAAAAGGAGTGCGAGTCTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp AAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTGACTGCGCTTCAGGAGCCCCATaGCCACCGCCTCAGCAGACG +
Preference number: 4 (lower is better)
Translates to: KLSVTTDSGPINLPTADCASGAP*PPPQQT
Trigger: CGTCTGCTGAGGCGGTGGCCATGGGGCTCCTGAAGC...GCAGTCAGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp TTCCACCAACCACAGGCAACTTTCCGCTCAGCTTCCAGGGCAGCACCCACGCCCGAAGGCCACAGACGCTaGAAGAACTTGGTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: FHQPQATFRSASRAAPTPEGHRR*KNLVLL
Trigger: CAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCTTC...GGGCGTGGGTGCTGCCCTGGAAGCTGAGCGGAAAGTTGCCTGTGGTTGGTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp AGTGGACGAAATGCCCATGACGTAGTCCTATTCTCTGCTGCTTCTCCTCGGGGCTGTTCCCTCTCACGCTaGTGGAGCCTCAGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: SGRNAHDVVLFSAASPRGCSLSR*WSLSPG
Trigger: GCCAGGGCTGAGGCTCCACCAGCGTGAGAGGGAACA...GCCCCGAGGAGAAGCAGCAGAGAATAGGACTACGTCATGGGCATTTCGTCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp AAGGGGAGAGAACGGAGTCGGGTTGTACTTTTACTCAGAAGCACAACGACCATCGGCACCTGCGGCCGGTaGGCTCCGGGTGATGCGCTA +
Preference number: 4 (lower is better)
Translates to: KGRERSRVVLLLRSTTTIGTCGR*APGDAL
Trigger: TAGCGCATCACCCGGAGCCCACCGGCCGCAGGTGCC...GATGGTCGTTGTGCTTCTGAGTAAAAGTACAACCCGACTCCGTTCTCTCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR TCA 90 bp GAAGTGGTTCGCTCGAGGTCTCATGGCAAGTTAGAGACACAGCCACTCCACCTCGGGCTGAGTGGGGACTaGGCCACCGGATGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: EVVRSRSHGKLETQPLHLGLSGD*ATGCLS
Trigger: TGAAAGACATCCGGTGGCTCAGTCCCCACTCAGCCC...GAGGTGGAGTGGCTGTGTCTCTAACTTGCCATGAGACCTCGAGCGAACCACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp CAGCAGCAGGAGAGGTGGTTGAGAAAGGCCTGGCTCAGAAGCTCCAGAACTGAAGAACATGCCTTCCCCTaGGCACAGGTACCGACCACC +
Preference number: 4 (lower is better)
Translates to: QQQERWLRKAWLRSSRTEEHAFP*AQVPTT
Trigger: GGTGGTCGGTACCTGTGCTCAGGGGAAGGCATGTTC...TTCAGTTCTGGAGCTTCTGAGCCAGGCCTTTCTCAACCACCTCTCCTGCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp TTCCACCAACCACAGGCAACTTTCCGCTCAGCTTCCAGGGCAGCACCCACGCCCATAAACTCCTGGGTCTaGATCTGGGACCTAACCCCT +
Preference number: 4 (lower is better)
Translates to: FHQPQATFRSASRAAPTPINSWV*IWDLTP
Trigger: AGGGGTTAGGTCCCAGATTCAGACCCAGGAGTTTAT...GGGCGTGGGTGCTGCCCTGGAAGCTGAGCGGAAAGTTGCCTGTGGTTGGTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTCCGCATCCGGGGCGGTaGGGCCGCCTCTTCGCCCAA +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTPHPGR*GRLFAQ
Trigger: TTGGGCGAAGAGGCGGCCTCACCGCCCCGGATGCGG...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR GCA 90 bp AAGGGGAGAGAACGGAGTCGGGTTGTACTTTTACTCAGAAGCACAACGACCATCCCCAGCAACTGCCAGTaGTCCCTCCCCTCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: KGRERSRVVLLLRSTTTIPSNCQ*SLPSRG
Trigger: CCCTCGGGAGGGGAGGGAGCACTGGCAGTTGCTGGG...GATGGTCGTTGTGCTTCTGAGTAAAAGTACAACCCGACTCCGTTCTCTCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000273582.9
CDS-3UTR GCA 90 bp TTCAAAGAGTGGCTCAGTTCTGCAACAGGTGTGACCCGGCCCGGAGGGAGGGCTGCCCGTGATAGAGGATaGTCTGCATGTCCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: FKEWLSSATGVTRPGGRAARDRG*SACPCK
Trigger: TTTGCAGGGACATGCAGAGCATCCTCTATCACGGGC...AGCCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCTTTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp GCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGTCACCTTTGGTACTGCAGGCTGTaGTGCAGCCACAGCTCGGCA +
Preference number: 4 (lower is better)
Translates to: AHLSSSAVTWRKSWMCHLWYCRL*CSHSSA
Trigger: TGCCGAGCTGTGGCTGCAGCACAGCCTGCAGTACCA...AAGGTGACACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp CAGGACAGGGAGAGGGAAAACGCCATCCCCGTTTCAGCAGCAGGAGAGGTGGTTGTGAGACGTGCCCTCTaGTTTCTTGAGGTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: QDRERENAIPVSAAGEVVVRRAL*FLEVSG
Trigger: CCCGGAAACCTCAAGAAAGCAGAGGGCACGTCTCAC...AACCACCTCTCCTGCTGCTGAAACGGGGATGGCGTTTTCCCTCTCCCTGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp GTGAAAGTCTACTCGGTCTTGCCCGGAGCTACCCAGGACCACAGCCAGCACCAGCTGGCTTCTGGGAGCTaGTGGAGGAGAACAAATTGG +
Preference number: 4 (lower is better)
Translates to: VKVYSVLPGATQDHSQHQLASGS*WRRTNW
Trigger: CCAATTTGTTCTCCTCCAGCAGCTCCCAGAAGCCAG...CTGGTGCTGGCTGTGGTCCTGGGTAGCTCCGGGCAAGACCGAGTAGACTTTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR GCA 90 bp AGTGGACGAAATGCCCATGACGTAGTCCTATTCTCTGCTGCTTCTCCTCGGGGCCAGGGTCAGTCCGGATaGCACATCCTGCACAGCGGT +
Preference number: 4 (lower is better)
Translates to: SGRNAHDVVLFSAASPRGQGQSG*HILHSG
Trigger: ACCGCTGTGCAGGATGTGGCATCCGGACTGACCCTG...GCCCCGAGGAGAAGCAGCAGAGAATAGGACTACGTCATGGGCATTTCGTCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp GAAGTGGTTCGCTCGAGGTCTCATGGCAAGTTAGAGACACAGCCACTCCACCTCAGGGAGGGCTGCACGTaGTTTCTTCAGGTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: EVVRSRSHGKLETQPLHLREGCT*FLQVAS
Trigger: GGAGGCCACCTGAAGAAAGCACGTGCAGCCCTCCCT...GAGGTGGAGTGGCTGTGTCTCTAACTTGCCATGAGACCTCGAGCGAACCACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp GCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGTCACCTTCTGGACCCATCAACCTaGCGACGGCTGACTGCACAC +
Preference number: 4 (lower is better)
Translates to: AHLSSSAVTWRKSWMCHLLDPST*RRLTAH
Trigger: GTGTGCAGTCAGCCGTCGGCAGGTTGATGGGTCCAG...AAGGTGACACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp TTCCACCAACCACAGGCAACTTTCCGCTCAGCTTCCAGGGCAGCACCCACGCCCGCTTTCTGGCAAACATaGACGCATCGATCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: FHQPQATFRSASRAAPTPAFWQT*THRSEP
Trigger: TGGCTCAGATCGATGCGTCCATGTTTGCCAGAAAGC...GGGCGTGGGTGCTGCCCTGGAAGCTGAGCGGAAAGTTGCCTGTGGTTGGTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp TTCAAAGAGTGGCTCAGTTCTGCAACAGGTGTGACCCGGCCCGGAGGGAGGGCTGGCTCTCGTGCTTTCTaGCAAACATGGACGCATCGA +
Preference number: 4 (lower is better)
Translates to: FKEWLSSATGVTRPGGRAGSRAF*QTWTHR
Trigger: TCGATGCGTCCATGTTTGCCAGAAAGCACGAGAGCC...AGCCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCTTTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp GCCACCGTGCCTGGCCAACACTTCTTGAGTGAAAGTCTACTCGGTCTTGCCCGGACTCAGGCCCCTCACTaGCATCACCTGGGGAATCAT +
Preference number: 4 (lower is better)
Translates to: ATVPGQHFLSESLLGLARTQAPH*HHLGNH
Trigger: ATGATTCCCCAGGTGATGCCAGTGAGGGGCCTGAGT...CCGGGCAAGACCGAGTAGACTTTCACTCAAGAAGTGTTGGCCAGGCACGGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp CCTCCCCTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTTGTGACTCTGACAGCTaGCAGTCCGGCCTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: PPLTRGSLDQDDLAALQACDSDS*QSGLGG
Trigger: ACCCCCGAGGCCGGACTGCCAGCTGTCAGAGTCACA...AGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAGGGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp AGGTGGAAACGCAGTTCAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGCTCCTGGAGCTCCCCTaGAGGCAATGCTGGTATCCG +
Preference number: 4 (lower is better)
Translates to: RWKRSSEHGRHTRNISTKLLELP*RQCWYP
Trigger: CGGATACCAGCATTGCCTCCAGGGGAGCTCCAGGAG...CTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTGAACTGCGTTTCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273582.9
CDS-3UTR CCA 90 bp AGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGGCTGGGGAGCAGGTTCTTaGTGCGGATTTGCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: RPQTLEELGLAVSSTDRGWGAGS*CGFAGA
Trigger: GGCGCCAGCAAATCCGCACCAAGAACCTGCTCCCCA...GCCTCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp AGGTGGAAACGCAGTTCAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGCAGCTCCGAGGCGGCTaGAAGCTGCATCCCCTCAAA +
Preference number: 4 (lower is better)
Translates to: RWKRSSEHGRHTRNISTKQLRGG*KLHPLK
Trigger: TTTGAGGGGATGCAGCTTCCAGCCGCCTCGGAGCTG...CTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTGAACTGCGTTTCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp AGTGGACGAAATGCCCATGACGTAGTCCTATTCTCTGCTGCTTCTCCTCGGGGCCTGGGGATGGCCATCTaGGCATTCTCGTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: SGRNAHDVVLFSAASPRGLGMAI*AFSWQH
Trigger: GTGCTGCCACGAGAATGCCCAGATGGCCATCCCCAG...GCCCCGAGGAGAAGCAGCAGAGAATAGGACTACGTCATGGGCATTTCGTCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp GAAGTGGTTCGCTCGAGGTCTCATGGCAAGTTAGAGACACAGCCACTCCACCTCGAACCCGGCTGGGGATaGCCATCTGGGCATTCTCGT +
Preference number: 4 (lower is better)
Translates to: EVVRSRSHGKLETQPLHLEPGWG*PSGHSR
Trigger: ACGAGAATGCCCAGATGGCCATCCCCAGCCGGGTTC...GAGGTGGAGTGGCTGTGTCTCTAACTTGCCATGAGACCTCGAGCGAACCACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp AAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTGACTGCTGCGCAGAACCCGGCTaGGGATGGCCATCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: KLSVTTDSGPINLPTADCCAEPG*GWPSGH
Trigger: ATGCCCAGATGGCCATCCCCAGCCGGGTTCTGCGCA...GCAGTCAGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp GTGAAAGTCTACTCGGTCTTGCCCGGAGCTACCCAGGACCACAGCCAGCACCAGTTCAGTGAGTACAGGTaGAGGTCCTCTGTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: VKVYSVLPGATQDHSQHQFSEYR*RSSVRW
Trigger: CCACCTGACAGAGGACCTCCACCTGTACTCACTGAA...CTGGTGCTGGCTGTGGTCCTGGGTAGCTCCGGGCAAGACCGAGTAGACTTTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp TGTGGCCCCCAAAATACCCAAATAAGTGGACGAAATGCCCATGACGTAGTCCTAACTCCAGGCTCTGCCTaGCCAGTGCCTCCCGCCGGG +
Preference number: 4 (lower is better)
Translates to: CGPQNTQISGRNAHDVVLTPGSA*PVPPAG
Trigger: CCCGGCGGGAGGCACTGGCCAGGCAGAGCCTGGAGT...TAGGACTACGTCATGGGCATTTCGTCCACTTATTTGGGTATTTTGGGGGCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp AGGTGGAAACGCAGTTCAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGCGTGCTTTCTTCAGGTaGCCTCCAGGACGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: RWKRSSEHGRHTRNISTKRAFFR*PPGRRL
Trigger: AAGCCGCCGTCCTGGAGGCCACCTGAAGAAAGCACG...CTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTGAACTGCGTTTCCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp GAAGTGGTTCGCTCGAGGTCTCATGGCAAGTTAGAGACACAGCCACTCCACCTCCGTGCTTTCTTCAGGTaGCCTCCAGGACGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: EVVRSRSHGKLETQPLHLRAFFR*PPGRRL
Trigger: AAGCCGCCGTCCTGGAGGCCACCTGAAGAAAGCACG...GAGGTGGAGTGGCTGTGTCTCTAACTTGCCATGAGACCTCGAGCGAACCACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp TTCAAAGAGTGGCTCAGTTCTGCAACAGGTGTGACCCGGCCCGGAGGGAGGGCTGAAGGCCACAGACGCTaGAAGAACTTGGTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: FKEWLSSATGVTRPGGRAEGHRR*KNLVLL
Trigger: CAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCTTC...AGCCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCTTTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp CAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGACTCGCACTCCTTTTATCCCTCTCACGCTGGTaGAGCCTCAGCCCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: QSTGGTHGTSLLRLALLLSLSRW*SLSPGH
Trigger: ATGGCCAGGGCTGAGGCTCCACCAGCGTGAGAGGGA...TAAAAGGAGTGCGAGTCTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp TCTTTGTACTCTCAGCTCTGGCATGGTGTCTGGAACACGGAGGCATCTATAGATGGAGGGACCGCCGCCTaGGCTGCGGCTTCTATCCCG +
Preference number: 4 (lower is better)
Translates to: SLYSQLWHGVWNTEASIDGGTAA*AAASIP
Trigger: CGGGATAGAAGCCGCAGCCCAGGCGGCGGTCCCTCC...ATCTATAGATGCCTCCGTGTTCCAGACACCATGCCAGAGCTGAGAGTACAAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR TCA 90 bp GATGACTGCTGGACAAACACAACAGGAGCAGTTGCAGACAAAGTAGCTGAGGGACTCCACGTGAAGGGCTaGGTGGGGACTGAGCCACCG +
Preference number: 4 (lower is better)
Translates to: DDCWTNTTGAVADKVAEGLHVKG*VGTEPP
Trigger: CGGTGGCTCAGTCCCCACTCAGCCCTTCACGTGGAG...TCCCTCAGCTACTTTGTCTGCAACTGCTCCTGTTGTGTTTGTCCAGCAGTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR TCA 90 bp GGAGTAGGAATGAGACGATGCGTGATGAGCTCAGTGTGCCACTTACAGAGGAAGATGGACGCATCGATCTaGGCCAGGAGGCGGGGGTTG +
Preference number: 4 (lower is better)
Translates to: GVGMRRCVMSSVCHLQRKMDASI*ARRRGL
Trigger: CAACCCCCGCCTCCTGGCTCAGATCGATGCGTCCAT...CTTCCTCTGTAAGTGGCACACTGAGCTCATCACGCATCGTCTCATTCCTACTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGGAGTGTCTGCCCCTCTaGGAAGCTGGACCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKECLPL*EAGPAE
Trigger: CTCCGCAGGTCCAGCTTCTCAGAGGGGCAGACACTC...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp AGAAGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAATGGGCAGGAGCTTCTaGGGGGCATCATGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: RRPQTLEELGLAVSSTDRMGRSF*GASCSG
Trigger: CCCGGAGCATGATGCCCCTCAGAAGCTCCTGCCCAT...TCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp GCCACCGTGCCTGGCCAACACTTCTTGAGTGAAAGTCTACTCGGTCTTGCCCGGAACATGTTCTTCATGTaGCACAGCTGGACCCGCAGC +
Preference number: 4 (lower is better)
Translates to: ATVPGQHFLSESLLGLARNMFFM*HSWTRS
Trigger: GCTGCGGGTCCAGCTGTGTCACATGAAGAACATGTT...CCGGGCAAGACCGAGTAGACTTTCACTCAAGAAGTGTTGGCCAGGCACGGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR TCA 90 bp TTCCACCAACCACAGGCAACTTTCCGCTCAGCTTCCAGGGCAGCACCCACGCCCCCAGTCGGCAAGTCTTaGACATGTTCTTCATGTGAC +
Preference number: 4 (lower is better)
Translates to: FHQPQATFRSASRAAPTPPVGKS*TCSSCD
Trigger: GTCACATGAAGAACATGTTCAAGACTTGCCGACTGG...GGGCGTGGGTGCTGCCCTGGAAGCTGAGCGGAAAGTTGCCTGTGGTTGGTGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp AAGGGGAGAGAACGGAGTCGGGTTGTACTTTTACTCAGAAGCACAACGACCATCGGCCGACCGCTCCTCTaGGTAAGCGCTCCTTCAGCG +
Preference number: 4 (lower is better)
Translates to: KGRERSRVVLLLRSTTTIGRPLL*VSAPSA
Trigger: CGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCC...GATGGTCGTTGTGCTTCTGAGTAAAAGTACAACCCGACTCCGTTCTCTCCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp GTTTACAAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTGGCCGACCGCTCCTCTaGGTAAGCGCTCCTTCAGCG +
Preference number: 4 (lower is better)
Translates to: VYKLSVTTDSGPINLPTAGRPLL*VSAPSA
Trigger: CGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCC...AGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTTGTAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp GAGCCTGGCCTGAGCATCAGTTCTGTTCTTTGCTTCAAGATCACCAAGGTAGATCGCAGGGGTCTGTCCTaGCTCCCGAGGCTGCGTTGC +
Preference number: 4 (lower is better)
Translates to: EPGLSISSVLCFKITKVDRRGLS*LPRLRC
Trigger: GCAACGCAGCCTCGGGAGGCAGGACAGACCCCTGCG...ATCTACCTTGGTGATCTTGAAGCAAAGAACAGAACTGATGCTCAGGCCAGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273582.9
CDS-3UTR GCA 90 bp AGTGGACGAAATGCCCATGACGTAGTCCTATTCTCTGCTGCTTCTCCTCGGGGCTGCTCTGCATGTCCCTaGAAAGCCGCTCCAAGCCAC +
Preference number: 4 (lower is better)
Translates to: SGRNAHDVVLFSAASPRGCSACP*KAAPSH
Trigger: GTGGCTTGGAGCGGCTTTGCAGGGACATGCAGAGCA...GCCCCGAGGAGAAGCAGCAGAGAATAGGACTACGTCATGGGCATTTCGTCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp AGTGGACGAAATGCCCATGACGTAGTCCTATTCTCTGCTGCTTCTCCTCGGGGCCTCGGGGGTCCAAGTTaGCAATGGCCAGGTACTCAG +
Preference number: 4 (lower is better)
Translates to: SGRNAHDVVLFSAASPRGLGGPS*QWPGTQ
Trigger: CTGAGTACCTGGCCATTGGCAACTTGGACCCCCGAG...GCCCCGAGGAGAAGCAGCAGAGAATAGGACTACGTCATGGGCATTTCGTCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp AGTGGACGAAATGCCCATGACGTAGTCCTATTCTCTGCTGCTTCTCCTCGGGGCCTGAGAAGCTGGACCTaGGGAGGACACTGGACAGCT +
Preference number: 4 (lower is better)
Translates to: SGRNAHDVVLFSAASPRGLRSWT*GGHWTA
Trigger: AGCTGTCCAGTGTCCTCCGCAGGTCCAGCTTCTCAG...GCCCCGAGGAGAAGCAGCAGAGAATAGGACTACGTCATGGGCATTTCGTCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp GAAGTGGTTCGCTCGAGGTCTCATGGCAAGTTAGAGACACAGCCACTCCACCTCCTCCCCTGGAGGCAATaGTGGTATCCGAATGGGAGC +
Preference number: 4 (lower is better)
Translates to: EVVRSRSHGKLETQPLHLLPWRQ*WYPNGS
Trigger: GCTCCCATTCGGATACCAGCATTGCCTCCAGGGGAG...GAGGTGGAGTGGCTGTGTCTCTAACTTGCCATGAGACCTCGAGCGAACCACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp AGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGGCCTCCCCTGGAGGCAATaGTGGTATCCGAATGGGAGC +
Preference number: 4 (lower is better)
Translates to: RPQTLEELGLAVSSTDRGLPWRQ*WYPNGS
Trigger: GCTCCCATTCGGATACCAGCATTGCCTCCAGGGGAG...GCCTCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp AGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGGCGGAGCAGGTTCTTGGTaGGGATTTGCTGGCGCCGAA +
Preference number: 4 (lower is better)
Translates to: RPQTLEELGLAVSSTDRGGAGSW*GFAGAE
Trigger: TTCGGCGCCAGCAAATCCGCACCAAGAACCTGCTCC...GCCTCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp GCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGTCACCTTGAGGCGGCTGGAAGCTaGATCCCCTCAAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: AHLSSSAVTWRKSWMCHLEAAGS*IPSNCF
Trigger: GAAGCAGTTTGAGGGGATGCAGCTTCCAGCCGCCTC...AAGGTGACACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp AGTGGACGAAATGCCCATGACGTAGTCCTATTCTCTGCTGCTTCTCCTCGGGGCGGGCCCACTCCAAGTTaGCACGAACACGAATCCGCA +
Preference number: 4 (lower is better)
Translates to: SGRNAHDVVLFSAASPRGGPTPS*HEHESA
Trigger: TGCGGATTCGTGTTCGTGGCAACTTGGAGTGGGCCC...GCCCCGAGGAGAAGCAGCAGAGAATAGGACTACGTCATGGGCATTTCGTCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp TTCAAAGAGTGGCTCAGTTCTGCAACAGGTGTGACCCGGCCCGGAGGGAGGGCTACTGGCAGAAGTACTTaGCCAGGTACTCACAGTACC +
Preference number: 4 (lower is better)
Translates to: FKEWLSSATGVTRPGGRATGRST*PGTHST
Trigger: GGTACTGTGAGTACCTGGGCAAGTACTTCTGCCAGT...AGCCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCTTTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp CCTCCCCTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTCACATGGGTAGCCCCTaGCCTGGTGAGCTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: PPLTRGSLDQDDLAALQAHMGSP*PGELSK
Trigger: CTTGCTGAGCTCACCAGGGCAGGGGCTACCCATGTG...AGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAGGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR GCA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGGCCCGGAGGGAGGGCTaGACGTGCTTTCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKARREG*TCFLQV
Trigger: CACCTGAAGAAAGCACGTGCAGCCCTCCCTCCGGGC...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp CAGCAGCAGGAGAGGTGGTTGAGAAAGGCCTGGCTCAGAAGCTCCAGAACTGAACTGCCGACGGCTGACTaGACACAGACGTCAGACAAG +
Preference number: 4 (lower is better)
Translates to: QQQERWLRKAWLRSSRTELPTAD*TQTSDK
Trigger: CTTGTCTGACGTCTGTGTGCAGTCAGCCGTCGGCAG...TTCAGTTCTGGAGCTTCTGAGCCAGGCCTTTCTCAACCACCTCTCCTGCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp AGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGGCCTGGCGCCTCACGTATaGTTGCGGCGTAAGGCTACA +
Preference number: 4 (lower is better)
Translates to: RPQTLEELGLAVSSTDRGLAPHV*LRRKAT
Trigger: TGTAGCCTTACGCCGCAAGCATACGTGAGGCGCCAG...GCCTCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp AGTGGACGAAATGCCCATGACGTAGTCCTATTCTCTGCTGCTTCTCCTCGGGGCCTGGCGCCTCACGTATaGTTGCGGCGTAAGGCTACA +
Preference number: 4 (lower is better)
Translates to: SGRNAHDVVLFSAASPRGLAPHV*LRRKAT
Trigger: TGTAGCCTTACGCCGCAAGCATACGTGAGGCGCCAG...GCCCCGAGGAGAAGCAGCAGAGAATAGGACTACGTCATGGGCATTTCGTCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp AGGTGGAAACGCAGTTCAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGGGAAGGACCCAGCTCTaGTGCAGGAAGGGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: RWKRSSEHGRHTRNISTKGRTQL*CRKGRE
Trigger: TTCTCTCCCCTTCCTGCAGCAGAGCTGGGTCCTTCC...CTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTGAACTGCGTTTCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTGACCGCCGCCTGGGCTaGGGCTTCTATCCCGGCCAC +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTDRRLG*GFYPGH
Trigger: GTGGCCGGGATAGAAGCCGCAGCCCAGGCGGCGGTC...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR GCA 90 bp CAGGACAGGGAGAGGGAAAACGCCATCCCCGTTTCAGCAGCAGGAGAGGTGGTTGGACACGCTCACTACTaGAGAGACTTGGTGAGCACT +
Preference number: 4 (lower is better)
Translates to: QDRERENAIPVSAAGEVVGHAHY*RDLVST
Trigger: AGTGCTCACCAAGTCTCTGCAGTAGTGAGCGTGTCC...AACCACCTCTCCTGCTGCTGAAACGGGGATGGCGTTTTCCCTCTCCCTGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CCA 90 bp CAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGACTCGCACTCCTTTTATGGGCTGAGAGGCAGTaGTACTGCAGGCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: QSTGGTHGTSLLRLALLLWAERQ*YCRLCC
Trigger: GCAGCACAGCCTGCAGTACCACTGCCTCTCAGCCCA...TAAAAGGAGTGCGAGTCTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp AGGTGGAAACGCAGTTCAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGGGGTGTATGTGGAACTaGGCAGGGCTGTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: RWKRSSEHGRHTRNISTKGCMWN*AGLSGS
Trigger: AGAGCCTGACAGCCCTGCCCAGTTCCACATACACCC...CTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTGAACTGCGTTTCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp CAGCAGCAGGAGAGGTGGTTGAGAAAGGCCTGGCTCAGAAGCTCCAGAACTGAACCCAGGATGCCTCTATaGGGCTGGTCAGAGTACTGG +
Preference number: 4 (lower is better)
Translates to: QQQERWLRKAWLRSSRTEPRMPL*GWSEYW
Trigger: CCAGTACTCTGACCAGCCCCATAGAGGCATCCTGGG...TTCAGTTCTGGAGCTTCTGAGCCAGGCCTTTCTCAACCACCTCTCCTGCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp GAAGTGGTTCGCTCGAGGTCTCATGGCAAGTTAGAGACACAGCCACTCCACCTCCCTGGGGAATCATTCTaGCTGCTGACCCAGGATGCC +
Preference number: 4 (lower is better)
Translates to: EVVRSRSHGKLETQPLHLPGESF*LLTQDA
Trigger: GGCATCCTGGGTCAGCAGCCAGAATGATTCCCCAGG...GAGGTGGAGTGGCTGTGTCTCTAACTTGCCATGAGACCTCGAGCGAACCACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp AGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGGCCCTGGGGAATCATTCTaGCTGCTGACCCAGGATGCC +
Preference number: 4 (lower is better)
Translates to: RPQTLEELGLAVSSTDRGPGESF*LLTQDA
Trigger: GGCATCCTGGGTCAGCAGCCAGAATGATTCCCCAGG...GCCTCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp GTGAAAGTCTACTCGGTCTTGCCCGGAGCTACCCAGGACCACAGCCAGCACCAGTCCTCCTCTAGGCACTaGCTCATCATGTTGCACTTC +
Preference number: 4 (lower is better)
Translates to: VKVYSVLPGATQDHSQHQSSSRH*LIMLHF
Trigger: GAAGTGCAACATGATGAGCCAGTGCCTAGAGGAGGA...CTGGTGCTGGCTGTGGTCCTGGGTAGCTCCGGGCAAGACCGAGTAGACTTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp CCTCCCCTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTTGGGGAGCAGGTTCTTaGTGCGGATTTGCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: PPLTRGSLDQDDLAALQAWGAGS*CGFAGA
Trigger: GGCGCCAGCAAATCCGCACCAAGAACCTGCTCCCCA...AGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAGGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp AGTGGACGAAATGCCCATGACGTAGTCCTATTCTCTGCTGCTTCTCCTCGGGGCCAGCCTCCTGGTACATaGGGAGCAGGTTCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: SGRNAHDVVLFSAASPRGQPPGT*GAGSWC
Trigger: GCACCAAGAACCTGCTCCCCATGTACCAGGAGGCTG...GCCCCGAGGAGAAGCAGCAGAGAATAGGACTACGTCATGGGCATTTCGTCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp AGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGGCTCACGTGAGCTGAACTaGGAGCTGCTGGAGGTGACC +
Preference number: 4 (lower is better)
Translates to: RPQTLEELGLAVSSTDRGSRELN*ELLEVT
Trigger: GGTCACCTCCAGCAGCTCCCAGTTCAGCTCACGTGA...GCCTCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp AGAAGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGACCGCCTCAGCAGACGTaGAGTGCAGGAAGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: RRPQTLEELGLAVSSTDRPPQQT*SAGSSG
Trigger: CCCACTGCTTCCTGCACTCCACGTCTGCTGAGGCGG...TCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp GTTTACAAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTGCTTCAGGAGCCCCATaGCCACCGCCTCAGCAGACG +
Preference number: 4 (lower is better)
Translates to: VYKLSVTTDSGPINLPTAASGAP*PPPQQT
Trigger: CGTCTGCTGAGGCGGTGGCCATGGGGCTCCTGAAGC...AGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTTGTAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp AGTGGACGAAATGCCCATGACGTAGTCCTATTCTCTGCTGCTTCTCCTCGGGGCGCAGTGAGTCAGGAATaGGCAGGAGCTTCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: SGRNAHDVVLFSAASPRGAVSQE*AGASEG
Trigger: CCCCTCAGAAGCTCCTGCCCATTCCTGACTCACTGC...GCCCCGAGGAGAAGCAGCAGAGAATAGGACTACGTCATGGGCATTTCGTCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp CCTCCCCTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTGAACCCGGCTGGGGATaGCCATCTGGGCATTCTCGT +
Preference number: 4 (lower is better)
Translates to: PPLTRGSLDQDDLAALQAEPGWG*PSGHSR
Trigger: ACGAGAATGCCCAGATGGCCATCCCCAGCCGGGTTC...AGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAGGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp GGAGTAGGAATGAGACGATGCGTGATGAGCTCAGTGTGCCACTTACAGAGGAAGTGCGCAGAACCCGGCTaGGGATGGCCATCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: GVGMRRCVMSSVCHLQRKCAEPG*GWPSGH
Trigger: ATGCCCAGATGGCCATCCCCAGCCGGGTTCTGCGCA...CTTCCTCTGTAAGTGGCACACTGAGCTCATCACGCATCGTCTCATTCCTACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp GCCACCGTGCCTGGCCAACACTTCTTGAGTGAAAGTCTACTCGGTCTTGCCCGGCTCTGTCAGGTGGCCTaGGACTGTGTCAAAGGAATC +
Preference number: 4 (lower is better)
Translates to: ATVPGQHFLSESLLGLARLCQVA*DCVKGI
Trigger: GATTCCTTTGACACAGTCCCAGGCCACCTGACAGAG...CCGGGCAAGACCGAGTAGACTTTCACTCAAGAAGTGTTGGCCAGGCACGGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp AGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGGCATGCATCTCTCCACATaGGTAGCCCCTGCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: RPQTLEELGLAVSSTDRGMHLST*VAPALV
Trigger: CACCAGGGCAGGGGCTACCCATGTGGAGAGATGCAT...GCCTCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp TTCAAAGAGTGGCTCAGTTCTGCAACAGGTGTGACCCGGCCCGGAGGGAGGGCTCAGGTCCGGCACTTATaGAGCTCAAAGGGAAAGATG +
Preference number: 4 (lower is better)
Translates to: FKEWLSSATGVTRPGGRAQVRHL*SSKGKM
Trigger: CATCTTTCCCTTTGAGCTCCATAAGTGCCGGACCTG...AGCCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCTTTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp AAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTGACTGCCGTGCTTTCTTCAGGTaGCCTCCAGGACGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: KLSVTTDSGPINLPTADCRAFFR*PPGRRL
Trigger: AAGCCGCCGTCCTGGAGGCCACCTGAAGAAAGCACG...GCAGTCAGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp AGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGGCCAGCAGCAGGAGAGGTaGTTGAGAAAGGCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: RPQTLEELGLAVSSTDRGQQQER*LRKAWL
Trigger: GAGCCAGGCCTTTCTCAACCACCTCTCCTGCTGCTG...GCCTCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp AGAAGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGATCCCTCTCACGCTGGTaGAGCCTCAGCCCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: RRPQTLEELGLAVSSTDRSLSRW*SLSPGH
Trigger: ATGGCCAGGGCTGAGGCTCCACCAGCGTGAGAGGGA...TCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp GGAGTAGGAATGAGACGATGCGTGATGAGCTCAGTGTGCCACTTACAGAGGAAGTGTTCCCTCTCACGCTaGTGGAGCCTCAGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: GVGMRRCVMSSVCHLQRKCSLSR*WSLSPG
Trigger: GCCAGGGCTGAGGCTCCACCAGCGTGAGAGGGAACA...CTTCCTCTGTAAGTGGCACACTGAGCTCATCACGCATCGTCTCATTCCTACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp AGGTGGAAACGCAGTTCAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGGAGCTGGAGCTCCAGTaGGCCAGGAGCAGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: RWKRSSEHGRHTRNISTKELELQ*ARSRRE
Trigger: TTCTCTTCTGCTCCTGGCCCACTGGAGCTCCAGCTC...CTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTGAACTGCGTTTCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTGGAGGGACCGCCGCCTaGGCTGCGGCTTCTATCCCG +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTGGTAA*AAASIP
Trigger: CGGGATAGAAGCCGCAGCCCAGGCGGCGGTCCCTCC...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR CCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTGGCACCTGCGGCCGGTaGGCTCCGGGTGATGCGCTA +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTGTCGR*APGDAL
Trigger: TAGCGCATCACCCGGAGCCCACCGGCCGCAGGTGCC...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR TCA 90 bp GCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGTCACCTTCCTCCCGAGGGAAGCTaGGGTCTTATTAGGGTAGTG +
Preference number: 4 (lower is better)
Translates to: AHLSSSAVTWRKSWMCHLPPEGS*GLIRVV
Trigger: CACTACCCTAATAAGACCTCAGCTTCCCTCGGGAGG...AAGGTGACACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273582.9
CDS-3UTR TCA 90 bp AGTGGACGAAATGCCCATGACGTAGTCCTATTCTCTGCTGCTTCTCCTCGGGGCAGCATGGCCGTGACATaGGCGTCACTTAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SGRNAHDVVLFSAASPRGSMAVT*ASLSRK
Trigger: CTTCCTGCTAAGTGACGCTCATGTCACGGCCATGCT...GCCCCGAGGAGAAGCAGCAGAGAATAGGACTACGTCATGGGCATTTCGTCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp AGGTGGAAACGCAGTTCAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGACTGCAGCATGGCCGTaGCATGAGCGTCACTTAGCA +
Preference number: 4 (lower is better)
Translates to: RWKRSSEHGRHTRNISTKTAAWP*HERHLA
Trigger: TGCTAAGTGACGCTCATGTCACGGCCATGCTGCAGT...CTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTGAACTGCGTTTCCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp AGTGGACGAAATGCCCATGACGTAGTCCTATTCTCTGCTGCTTCTCCTCGGGGCACTGCAGCATGGCCGTaGCATGAGCGTCACTTAGCA +
Preference number: 4 (lower is better)
Translates to: SGRNAHDVVLFSAASPRGTAAWP*HERHLA
Trigger: TGCTAAGTGACGCTCATGTCACGGCCATGCTGCAGT...GCCCCGAGGAGAAGCAGCAGAGAATAGGACTACGTCATGGGCATTTCGTCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp CCCCTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGTGCCCTCTGCTTTCTTaGGGTTTCCGGGGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: PLTRGSLDQDDLAALQAKCPLLS*GFRGGP
Trigger: TGGCCCTCCCCGGAAACCTCAAGAAAGCAGAGGGCA...CTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR TCA 90 bp GCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGTCACCTTGAGGGACTGTCCTTCTaGTGGTCTTCGGAACATGCC +
Preference number: 4 (lower is better)
Translates to: AHLSSSAVTWRKSWMCHLEGLSF*WSSEHA
Trigger: GGCATGTTCCGAAGACCATCAGAAGGACAGTCCCTC...AAGGTGACACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp AAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTGACTGCCTGTGCCGAATCACGTaGGCTGAACTGGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KLSVTTDSGPINLPTADCLCRIT*AELGAA
Trigger: AGCAGCTCCCAGTTCAGCTCACGTGATTCGGCACAG...GCAGTCAGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp CAGCAGCAGGAGAGGTGGTTGAGAAAGGCCTGGCTCAGAAGCTCCAGAACTGAACTCCTCCTCGTAGTCTaGCAGGTAAGACTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: QQQERWLRKAWLRSSRTELLLVV*QVRLQA
Trigger: AGCCTGGAGTCTTACCTGTCAGACTACGAGGAGGAG...TTCAGTTCTGGAGCTTCTGAGCCAGGCCTTTCTCAACCACCTCTCCTGCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp AGAAGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGACAACCTGCCGACGGCTaGCTGCACACAGACGTCAGA +
Preference number: 4 (lower is better)
Translates to: RRPQTLEELGLAVSSTDRQPADG*LHTDVR
Trigger: TCTGACGTCTGTGTGCAGTCAGCCGTCGGCAGGTTG...TCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCTTCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp CAGGACAGGGAGAGGGAAAACGCCATCCCCGTTTCAGCAGCAGGAGAGGTGGTTCCCGCATGTCAGTTCTaGTGGAAACACCTGGTGTTT +
Preference number: 4 (lower is better)
Translates to: QDRERENAIPVSAAGEVVPACQF*WKHLVF
Trigger: AAACACCAGGTGTTTCCATCAGAACTGACATGCGGG...AACCACCTCTCCTGCTGCTGAAACGGGGATGGCGTTTTCCCTCTCCCTGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp CAGGACAGGGAGAGGGAAAACGCCATCCCCGTTTCAGCAGCAGGAGAGGTGGTTGATCCTATGCTGATGTaGAACAGGCAGGACAAGACG +
Preference number: 4 (lower is better)
Translates to: QDRERENAIPVSAAGEVVDPMLM*NRQDKT
Trigger: CGTCTTGTCCTGCCTGTTTCACATCAGCATAGGATC...AACCACCTCTCCTGCTGCTGAAACGGGGATGGCGTTTTCCCTCTCCCTGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp CAAGACGGCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGTGGGTATTTGGAAGGTaGGGACGGCATCGTGTCAGA +
Preference number: 4 (lower is better)
Translates to: QDGTSVLQRSDLEKELDVWVFGR*GRHRVR
Trigger: TCTGACACGATGCCGTCCTCACCTTCCAAATACCCA...CACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGCCGTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp GTGAAAGTCTACTCGGTCTTGCCCGGAGCTACCCAGGACCACAGCCAGCACCAGAGCTGCATGCTACAGTaGGACTTTCTCACCATGCAT +
Preference number: 4 (lower is better)
Translates to: VKVYSVLPGATQDHSQHQSCMLQ*DFLTMH
Trigger: ATGCATGGTGAGAAAGTCTCACTGTAGCATGCAGCT...CTGGTGCTGGCTGTGGTCCTGGGTAGCTCCGGGCAAGACCGAGTAGACTTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR GCA 90 bp AGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGGCCATAAGATTCAGAGGTaGCCGCGGTCTAGCATCCCC +
Preference number: 4 (lower is better)
Translates to: RPQTLEELGLAVSSTDRGHKIQR*PRSSIP
Trigger: GGGGATGCTAGACCGCGGGCACCTCTGAATCTTATG...GCCTCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273582.9
CDS-3UTR GCA 90 bp GCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGTCACCTTTATAGGGGACCTGTCTaGAGCAGGAGGGACTCGAAG +
Preference number: 4 (lower is better)
Translates to: AHLSSSAVTWRKSWMCHLYRGPV*SRRDSK
Trigger: CTTCGAGTCCCTCCTGCTGCAGACAGGTCCCCTATA...AAGGTGACACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273582.9
CDS-3UTR GCA 90 bp AAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTGACTGCTGCTTTGCGTTCAGATaGGGCAGCTCAGCGCAGCTG +
Preference number: 4 (lower is better)
Translates to: KLSVTTDSGPINLPTADCCFAFR*GSSAQL
Trigger: CAGCTGCGCTGAGCTGCCGCATCTGAACGCAAAGCA...GCAGTCAGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273582.9
CDS-3UTR GCA 90 bp AGTGGACGAAATGCCCATGACGTAGTCCTATTCTCTGCTGCTTCTCCTCGGGGCCTGCAGCGTTTGCTTTaGGTTCAGATGCGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: SGRNAHDVVLFSAASPRGLQRLL*VQMRQL
Trigger: GAGCTGCCGCATCTGAACGCAAAGCAAACGCTGCAG...GCCCCGAGGAGAAGCAGCAGAGAATAGGACTACGTCATGGGCATTTCGTCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273582.9
CDS-3UTR GCA 90 bp CAAGACGGCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGGCCCGTGATAGAGGATaGTCTGCATGTCCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: QDGTSVLQRSDLEKELDVARDRG*SACPCK
Trigger: TTTGCAGGGACATGCAGAGCATCCTCTATCACGGGC...CACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGCCGTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp CCCCTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGCTGCTGACCCAGGATaGCTCTATGGGGCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: PLTRGSLDQDDLAALQAKAADPG*LYGAGQ
Trigger: CTGACCAGCCCCATAGAGGCATCCTGGGTCAGCAGC...CTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR GCA 90 bp AGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGGCTGCTCTCGGCATTGCTaGTGTGACTCTGACAGCTGG +
Preference number: 4 (lower is better)
Translates to: RPQTLEELGLAVSSTDRGCSRHC*CDSDSW
Trigger: CCAGCTGTCAGAGTCACAGCAGCAATGCCGAGAGCA...GCCTCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp ATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTCCAGTTCCTCTCCCAGTGCTGCTCTCGGCATTaGTGCTGTGACTCTGACAGC +
Preference number: 4 (lower is better)
Translates to: IWLLSRLRNSSPFQFLSQCCSRH*CCDSDS
Trigger: GCTGTCAGAGTCACAGCAGCAATGCCGAGAGCAGCA...CTGGGAGAGGAACTGGAAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR GCA 90 bp TTCAAAGAGTGGCTCAGTTCTGCAACAGGTGTGACCCGGCCCGGAGGGAGGGCTAGAACAAATTGGAACTaGTGCTCTCGGCATTGCTGC +
Preference number: 4 (lower is better)
Translates to: FKEWLSSATGVTRPGGRARTNWN*CSRHCC
Trigger: GCAGCAATGCCGAGAGCAGCAGTTCCAATTTGTTCT...AGCCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCTTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp ATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTCCAGTTCCTCTCCCAGGTGACAGTGAGTGTCTaGCCCTCTGAGAAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: IWLLSRLRNSSPFQFLSQVTVSV*PSEKLD
Trigger: GTCCAGCTTCTCAGAGGGGCAGACACTCACTGTCAC...CTGGGAGAGGAACTGGAAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR GCA 90 bp CAAGACGGCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGATGGTCTTCGGAACATaGCTTCCCCTGAGCACAGGT +
Preference number: 4 (lower is better)
Translates to: QDGTSVLQRSDLEKELDVMVFGT*LPLSTG
Trigger: ACCTGTGCTCAGGGGAAGGCATGTTCCGAAGACCAT...CACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGCCGTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp CCTCCCCTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTTTCTTGGTGCGGATTTaGTGGCGCCGAAGGCGGATC +
Preference number: 4 (lower is better)
Translates to: PPLTRGSLDQDDLAALQAFLVRI*WRRRRI
Trigger: GATCCGCCTTCGGCGCCAGCAAATCCGCACCAAGAA...AGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAGGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR GCA 90 bp ATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTCCAGTTCCAGGGTCAGTCCGGATaGCACATCCTGCACAGCGGT +
Preference number: 4 (lower is better)
Translates to: IRMIWLLSRLRNSSPFQFQGQSG*HILHSG
Trigger: ACCGCTGTGCAGGATGTGGCATCCGGACTGACCCTG...GAACTGGAAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR GCA 90 bp AAGGGGAGAGAACGGAGTCGGGTTGTACTTTTACTCAGAAGCACAACGACCATCGCCCGGAGGGAGGGCTaGACGTGCTTTCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: KGRERSRVVLLLRSTTTIARREG*TCFLQV
Trigger: CACCTGAAGAAAGCACGTGCAGCCCTCCCTCCGGGC...GATGGTCGTTGTGCTTCTGAGTAAAAGTACAACCCGACTCCGTTCTCTCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp GGAGTAGGAATGAGACGATGCGTGATGAGCTCAGTGTGCCACTTACAGAGGAAGAGGACCCAGCTCTGCTaGAGGAAGGGGAGAGAACGG +
Preference number: 4 (lower is better)
Translates to: GVGMRRCVMSSVCHLQRKRTQLC*RKGRER
Trigger: CCGTTCTCTCCCCTTCCTGCAGCAGAGCTGGGTCCT...CTTCCTCTGTAAGTGGCACACTGAGCTCATCACGCATCGTCTCATTCCTACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCCTACACAGAGTTAAGTaGATAATTGGCATAAAGGCT +
Preference number: 4 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGALHRVK*IIGIKA
Trigger: AGCCTTTATGCCAATTATGCACTTAACTCTGTGTAG...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp TTCAAAGAGTGGCTCAGTTCTGCAACAGGTGTGACCCGGCCCGGAGGGAGGGCTTTTAGTTCACAGAGCTaGCAGCTCTTGGAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: FKEWLSSATGVTRPGGRAFSSQS*QLLEKP
Trigger: TGGCTTCTCCAAGAGCTGGCAGCTCTGTGAACTAAA...AGCCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCTTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp CTAAGAGGGGAGGTAGAGGTGGTCACAATCCCGCCCCTCATGCCACAGTGTGCTAGACGTTGGGGCTGTTaGTTGATACCAAACCCTCCA +
Preference number: 4 (lower is better)
Translates to: LRGEVEVVTIPPLMPQCARRWGC*LIPNPP
Trigger: TGGAGGGTTTGGTATCAACCAACAGCCCCAACGTCT...AGCACACTGTGGCATGAGGGGCGGGATTGTGACCACCTCTACCTCCCCTCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CCA 90 bp AGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGGCTTGGAGGGGTGTATGTaGAACTGGGCAGGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: RPQTLEELGLAVSSTDRGLEGCM*NWAGLS
Trigger: TGACAGCCCTGCCCAGTTCCACATACACCCCTCCAA...GCCTCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp AGTGGACGAAATGCCCATGACGTAGTCCTATTCTCTGCTGCTTCTCCTCGGGGCTTGGGCACGGATTGGTaGAGGCTAGAGAAGGACCCA +
Preference number: 4 (lower is better)
Translates to: SGRNAHDVVLFSAASPRGLGTDW*RLEKDP
Trigger: TGGGTCCTTCTCTAGCCTCCACCAATCCGTGCCCAA...GCCCCGAGGAGAAGCAGCAGAGAATAGGACTACGTCATGGGCATTTCGTCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp TTCAAAGAGTGGCTCAGTTCTGCAACAGGTGTGACCCGGCCCGGAGGGAGGGCTTCAAAGGGGAATCCCTaGCTAGTGCAGAGACTGAAA +
Preference number: 4 (lower is better)
Translates to: FKEWLSSATGVTRPGGRASKGNP*LVQRLK
Trigger: TTTCAGTCTCTGCACTAGCCAGGGATTCCCCTTTGA...AGCCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCTTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp CAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGACTCGCACTCCTTTTAGGTCCAAGTTGCCAATaGCCAGGTACTCAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: QSTGGTHGTSLLRLALLLGPSCQ*PGTQAP
Trigger: AGGGGCCTGAGTACCTGGCCATTGGCAACTTGGACC...TAAAAGGAGTGCGAGTCTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp TTCACAGCTGCCTCTGAGGTCTCTGAGGAGTCTAGGATAGTCAGGATTGTTCTGACCTGCGGAGGACACTaGACAGCTGGCTCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: FTAASEVSEESRIVRIVLTCGGH*TAGSPH
Trigger: GTGGGGAGAGCCAGCTGTCCAGTGTCCTCCGCAGGT...CAGAACAATCCTGACTATCCTAGACTCCTCAGAGACCTCAGAGGCAGCTGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp GAAGTGGTTCGCTCGAGGTCTCATGGCAAGTTAGAGACACAGCCACTCCACCTCCCCTGGAGGCAATGCTaGTATCCGAATGGGAGCGAA +
Preference number: 4 (lower is better)
Translates to: EVVRSRSHGKLETQPLHLPWRQC*YPNGSE
Trigger: TTCGCTCCCATTCGGATACCAGCATTGCCTCCAGGG...GAGGTGGAGTGGCTGTGTCTCTAACTTGCCATGAGACCTCGAGCGAACCACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp AGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGGCCCCTGGAGGCAATGCTaGTATCCGAATGGGAGCGAA +
Preference number: 4 (lower is better)
Translates to: RPQTLEELGLAVSSTDRGPWRQC*YPNGSE
Trigger: TTCGCTCCCATTCGGATACCAGCATTGCCTCCAGGG...GCCTCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp AAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTGACTGCTTGGTGCGGATTTGCTaGCGCCGAAGGCGGATCTTC +
Preference number: 4 (lower is better)
Translates to: KLSVTTDSGPINLPTADCLVRIC*RRRRIF
Trigger: GAAGATCCGCCTTCGGCGCCAGCAAATCCGCACCAA...GCAGTCAGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp AGAAGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGACCGTGCTCAGCCTCCTaGTACATGGGGAGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: RRPQTLEELGLAVSSTDRPCSAS*YMGSRF
Trigger: GAACCTGCTCCCCATGTACCAGGAGGCTGAGCACGG...TCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCCTGATGTCAGCATCTTaGATTTCAAATTCATCAACC +
Preference number: 4 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGALMSAS*ISNSST
Trigger: GGTTGATGAATTTGAAATCCAAGATGCTGACATCAG...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp CAGGACAGGGAGAGGGAAAACGCCATCCCCGTTTCAGCAGCAGGAGAGGTGGTTCAGTGGGAGAAGGACTaGGAGGAAACGAAGGATTTG +
Preference number: 4 (lower is better)
Translates to: QDRERENAIPVSAAGEVVQWEKD*EETKDL
Trigger: CAAATCCTTCGTTTCCTCCCAGTCCTTCTCCCACTG...AACCACCTCTCCTGCTGCTGAAACGGGGATGGCGTTTTCCCTCTCCCTGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp TCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTGCTTCAGGAGCCCCATaGCCACCGCCTCAGCAGACG +
Preference number: 4 (lower is better)
Translates to: SLDQDDLAALQAKEQQPFASGAP*PPPQQT
Trigger: CGTCTGCTGAGGCGGTGGCCATGGGGCTCCTGAAGC...AAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp GGAGTAGGAATGAGACGATGCGTGATGAGCTCAGTGTGCCACTTACAGAGGAAGCAGCTCCGAGGCGGCTaGAAGCTGCATCCCCTCAAA +
Preference number: 4 (lower is better)
Translates to: GVGMRRCVMSSVCHLQRKQLRGG*KLHPLK
Trigger: TTTGAGGGGATGCAGCTTCCAGCCGCCTCGGAGCTG...CTTCCTCTGTAAGTGGCACACTGAGCTCATCACGCATCGTCTCATTCCTACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp AGAAGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGACAGCTCCGAGGCGGCTaGAAGCTGCATCCCCTCAAA +
Preference number: 4 (lower is better)
Translates to: RRPQTLEELGLAVSSTDRQLRGG*KLHPLK
Trigger: TTTGAGGGGATGCAGCTTCCAGCCGCCTCGGAGCTG...TCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp CAGGACAGGGAGAGGGAAAACGCCATCCCCGTTTCAGCAGCAGGAGAGGTGGTTAGCGGTAATTCTGCTTaGCCACGGCAATTTTCCTCG +
Preference number: 4 (lower is better)
Translates to: QDRERENAIPVSAAGEVVSGNSA*PRQFSS
Trigger: CGAGGAAAATTGCCGTGGCCAAGCAGAATTACCGCT...AACCACCTCTCCTGCTGCTGAAACGGGGATGGCGTTTTCCCTCTCCCTGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp AGAAGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGAACCCGGCTGGGGATaGCCATCTGGGCATTCTCGT +
Preference number: 4 (lower is better)
Translates to: RRPQTLEELGLAVSSTDREPGWG*PSGHSR
Trigger: ACGAGAATGCCCAGATGGCCATCCCCAGCCGGGTTC...TCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGGAACCCGGCTGGGGATaGCCATCTGGGCATTCTCGT +
Preference number: 4 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKEPGWG*PSGHSR
Trigger: ACGAGAATGCCCAGATGGCCATCCCCAGCCGGGTTC...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp CAGCAGCAGGAGAGGTGGTTGAGAAAGGCCTGGCTCAGAAGCTCCAGAACTGAAAGGTCCTCTGTCAGGTaGCCTGGGACTGTGTCAAAG +
Preference number: 4 (lower is better)
Translates to: QQQERWLRKAWLRSSRTERSSVR*PGTVSK
Trigger: CTTTGACACAGTCCCAGGCCACCTGACAGAGGACCT...TTCAGTTCTGGAGCTTCTGAGCCAGGCCTTTCTCAACCACCTCTCCTGCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp AGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGGCTGTCACCACAGACTCTaGACCCATCAACCTGCCGAC +
Preference number: 4 (lower is better)
Translates to: RPQTLEELGLAVSSTDRGCHHRL*THQPAD
Trigger: GTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACA...GCCTCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp GCCACCGTGCCTGGCCAACACTTCTTGAGTGAAAGTCTACTCGGTCTTGCCCGGATCATTGCAGGATTCTaGAGCTCCCCTGGAGGCAAT +
Preference number: 4 (lower is better)
Translates to: ATVPGQHFLSESLLGLARIIAGF*SSPGGN
Trigger: ATTGCCTCCAGGGGAGCTCCAGAATCCTGCAATGAT...CCGGGCAAGACCGAGTAGACTTTCACTCAAGAAGTGTTGGCCAGGCACGGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp ATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTCCAGTTCCTCTCCCAGGGCCTCCCAAATTGCTaGGATGAGAGGCCTAAGCCA +
Preference number: 4 (lower is better)
Translates to: IWLLSRLRNSSPFQFLSQGLPNC*DERPKP
Trigger: TGGCTTAGGCCTCTCATCCCAGCAATTTGGGAGGCC...CTGGGAGAGGAACTGGAAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR TCA 90 bp GCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGTCACCTTACTTTGGAGTTAAGGTaGCGCAGGAACCGTCACTGC +
Preference number: 4 (lower is better)
Translates to: AHLSSSAVTWRKSWMCHLTLELR*RRNRHC
Trigger: GCAGTGACGGTTCCTGCGTCACCTTAACTCCAAAGT...AAGGTGACACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273582.9
CDS-3UTR TCA 90 bp TTCACAGCTGCCTCTGAGGTCTCTGAGGAGTCTAGGATAGTCAGGATTGTTCTGGGGCTGAGTGGGGACTaGGCCACCGGATGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: FTAASEVSEESRIVRIVLGLSGD*ATGCLS
Trigger: TGAAAGACATCCGGTGGCTCAGTCCCCACTCAGCCC...CAGAACAATCCTGACTATCCTAGACTCCTCAGAGACCTCAGAGGCAGCTGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTCTCCACGTGAAGGGCTaGGTGGGGACTGAGCCACCG +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTLHVKG*VGTEPP
Trigger: CGGTGGCTCAGTCCCCACTCAGCCCTTCACGTGGAG...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR TCA 90 bp GATGACTGCTGGACAAACACAACAGGAGCAGTTGCAGACAAAGTAGCTGAGGGATGCCCTCTGCTTTCTTaGGGTTTCCGGGGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: DDCWTNTTGAVADKVAEGCPLLS*GFRGGP
Trigger: TGGCCCTCCCCGGAAACCTCAAGAAAGCAGAGGGCA...TCCCTCAGCTACTTTGTCTGCAACTGCTCCTGTTGTGTTTGTCCAGCAGTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR TCA 90 bp GTTTACAAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTTGCCCTCTGCTTTCTTaGGGTTTCCGGGGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: VYKLSVTTDSGPINLPTACPLLS*GFRGGP
Trigger: TGGCCCTCCCCGGAAACCTCAAGAAAGCAGAGGGCA...AGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTTGTAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp GATGACTGCTGGACAAACACAACAGGAGCAGTTGCAGACAAAGTAGCTGAGGGACCGAATCACGTGAGCTaGACTGGGAGCTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: DDCWTNTTGAVADKVAEGPNHVS*TGSCWR
Trigger: CCTCCAGCAGCTCCCAGTTCAGCTCACGTGATTCGG...TCCCTCAGCTACTTTGTCTGCAACTGCTCCTGTTGTGTTTGTCCAGCAGTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR TCA 90 bp GTTTACAAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTCCGAATCACGTGAGCTaGACTGGGAGCTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: VYKLSVTTDSGPINLPTAPNHVS*TGSCWR
Trigger: CCTCCAGCAGCTCCCAGTTCAGCTCACGTGATTCGG...AGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTTGTAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp ATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTCCAGTTCCTGTGCCGAATCACGTaGGCTGAACTGGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: IRMIWLLSRLRNSSPFQFLCRIT*AELGAA
Trigger: AGCAGCTCCCAGTTCAGCTCACGTGATTCGGCACAG...GAACTGGAAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR TCA 90 bp CTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAAATGGGCAGGAGCTTCTaGGGGGCATCATGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: LTRGSLDQDDLAALQAKEMGRSF*GASCSG
Trigger: CCCGGAGCATGATGCCCCTCAGAAGCTCCTGCCCAT...TTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR TCA 90 bp AGAAGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGACGCAGCAGCCGGACTTaGTTGAGCAGCTTGACCTTC +
Preference number: 4 (lower is better)
Translates to: RRPQTLEELGLAVSSTDRRSSRT*LSSLTF
Trigger: GAAGGTCAAGCTGCTCAATCAAGTCCGGCTGCTGCG...TCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCTTCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGCGCAGCAGCCGGACTTaGTTGAGCAGCTTGACCTTC +
Preference number: 4 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKRSSRT*LSSLTF
Trigger: GAAGGTCAAGCTGCTCAATCAAGTCCGGCTGCTGCG...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp ATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTCCAGTTCCTCTCCCAGAGTCAGGTCATTCAGTaGGTACAGGTGGAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: IWLLSRLRNSSPFQFLSQSQVIQ*VQVEVL
Trigger: GAGGACCTCCACCTGTACTCACTGAATGACCTGACT...CTGGGAGAGGAACTGGAAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR TCA 90 bp TTCCACCAACCACAGGCAACTTTCCGCTCAGCTTCCAGGGCAGCACCCACGCCCATGTCATCCTCATTCTaGCAGAACTCACAGATGAAG +
Preference number: 4 (lower is better)
Translates to: FHQPQATFRSASRAAPTPMSSSF*QNSQMK
Trigger: CTTCATCTGTGAGTTCTGTCAGAATGAGGATGACAT...GGGCGTGGGTGCTGCCCTGGAAGCTGAGCGGAAAGTTGCCTGTGGTTGGTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp GCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGTCACCTTTACCTGACATGCAGGTaGAACCTAGAGGAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: AHLSSSAVTWRKSWMCHLYLTCR*NLEEKA
Trigger: GGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTA...AAGGTGACACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp AGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGGCTACCTGACATGCAGGTaGAACCTAGAGGAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: RPQTLEELGLAVSSTDRGYLTCR*NLEEKA
Trigger: GGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTA...GCCTCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp CAGCAGCAGGAGAGGTGGTTGAGAAAGGCCTGGCTCAGAAGCTCCAGAACTGAACAGGTGAGCCTGGCCTaGGCATCAGTTCTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: QQQERWLRKAWLRSSRTEQVSLA*ASVLFF
Trigger: AAAGAACAGAACTGATGCTCAGGCCAGGCTCACCTG...TTCAGTTCTGGAGCTTCTGAGCCAGGCCTTTCTCAACCACCTCTCCTGCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp AGGTGGAAACGCAGTTCAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGCAGGTGAGCCTGGCCTaGGCATCAGTTCTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: RWKRSSEHGRHTRNISTKQVSLA*ASVLFF
Trigger: AAAGAACAGAACTGATGCTCAGGCCAGGCTCACCTG...CTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTGAACTGCGTTTCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp AGTGGACGAAATGCCCATGACGTAGTCCTATTCTCTGCTGCTTCTCCTCGGGGCCATCAGGGACCTGCCTaGGCTTCAAAGATCACACCT +
Preference number: 4 (lower is better)
Translates to: SGRNAHDVVLFSAASPRGHQGPA*ASKITP
Trigger: AGGTGTGATCTTTGAAGCTCAGGCAGGTCCCTGATG...GCCCCGAGGAGAAGCAGCAGAGAATAGGACTACGTCATGGGCATTTCGTCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp GAAGTGGTTCGCTCGAGGTCTCATGGCAAGTTAGAGACACAGCCACTCCACCTCACCAGCAAGCAACTATaGGAAGACATGCCCATGGGC +
Preference number: 4 (lower is better)
Translates to: EVVRSRSHGKLETQPLHLTSKQL*EDMPMG
Trigger: GCCCATGGGCATGTCTTCTCATAGTTGCTTGCTGGT...GAGGTGGAGTGGCTGTGTCTCTAACTTGCCATGAGACCTCGAGCGAACCACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp AGAAGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGATGTCCTCCAGCGCAGTaGCCTGGAGAAAGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: RRPQTLEELGLAVSSTDRCPPAQ*PGERAG
Trigger: TCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACA...TCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp CAAGACGGCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGGATCCTATGCTGATGTaGAACAGGCAGGACAAGACG +
Preference number: 4 (lower is better)
Translates to: QDGTSVLQRSDLEKELDVDPMLM*NRQDKT
Trigger: CGTCTTGTCCTGCCTGTTTCACATCAGCATAGGATC...CACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGCCGTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp AGGTGGAAACGCAGTTCAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGTGGGTATTTGGAAGGTaGGGACGGCATCGTGTCAGA +
Preference number: 4 (lower is better)
Translates to: RWKRSSEHGRHTRNISTKWVFGR*GRHRVR
Trigger: TCTGACACGATGCCGTCCTCACCTTCCAAATACCCA...CTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTGAACTGCGTTTCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp AGGTGGAAACGCAGTTCAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGACTGCAGAGACTTGGTaGGCACTAAGAGGGGAGGTA +
Preference number: 4 (lower is better)
Translates to: RWKRSSEHGRHTRNISTKTAETW*ALRGEV
Trigger: TACCTCCCCTCTTAGTGCTCACCAAGTCTCTGCAGT...CTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTGAACTGCGTTTCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR TCA 90 bp TCTTTGTACTCTCAGCTCTGGCATGGTGTCTGGAACACGGAGGCATCTATAGATAATCTCTTGACCTCGTaGTCCGCCCGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: SLYSQLWHGVWNTEASIDNLLTS*SARLGL
Trigger: GAGGCCGAGGCGGGCGGATCACGAGGTCAAGAGATT...ATCTATAGATGCCTCCGTGTTCCAGACACCATGCCAGAGCTGAGAGTACAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR TCA 90 bp GCCACCGTGCCTGGCCAACACTTCTTGAGTGAAAGTCTACTCGGTCTTGCCCGGCCAACACTTCTTGAGTaGAAGTCTACTCGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: ATVPGQHFLSESLLGLARPTLLE*KSTRSC
Trigger: GCAAGACCGAGTAGACTTTCACTCAAGAAGTGTTGG...CCGGGCAAGACCGAGTAGACTTTCACTCAAGAAGTGTTGGCCAGGCACGGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR GCA 90 bp CAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGACTCGCACTCCTTTTATGGCACCATCAGCACTaGTCTGGTCGTTCTCGTGCA +
Preference number: 4 (lower is better)
Translates to: QSTGGTHGTSLLRLALLLWHHQH*SGRSRA
Trigger: TGCACGAGAACGACCAGAGCAGTGCTGATGGTGCCA...TAAAAGGAGTGCGAGTCTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp GTTTACAAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTTGGTACTGCAGGCTGTaGTGCAGCCACAGCTCGGCA +
Preference number: 4 (lower is better)
Translates to: VYKLSVTTDSGPINLPTAWYCRL*CSHSSA
Trigger: TGCCGAGCTGTGGCTGCAGCACAGCCTGCAGTACCA...AGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTTGTAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp CAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGACTCGCACTCCTTTTAAGGAGCGGGCTCTCGTaGTTTCTGGCAAACATGGAC +
Preference number: 4 (lower is better)
Translates to: QSTGGTHGTSLLRLALLLRSGLS*FLANMD
Trigger: GTCCATGTTTGCCAGAAAGCACGAGAGCCCGCTCCT...TAAAAGGAGTGCGAGTCTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGCTCGGGGGTCCAAGTTaGCAATGGCCAGGTACTCAG +
Preference number: 4 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKLGGPS*QWPGTQ
Trigger: CTGAGTACCTGGCCATTGGCAACTTGGACCCCCGAG...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp CAGGACAGGGAGAGGGAAAACGCCATCCCCGTTTCAGCAGCAGGAGAGGTGGTTACAAATTGGAACTGCTaGTCTCGGCATTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: QDRERENAIPVSAAGEVVTNWNC*SRHCCC
Trigger: ACAGCAGCAATGCCGAGAGCAGCAGTTCCAATTTGT...AACCACCTCTCCTGCTGCTGAAACGGGGATGGCGTTTTCCCTCTCCCTGTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp CTAAGAGGGGAGGTAGAGGTGGTCACAATCCCGCCCCTCATGCCACAGTGTGCTAGAACAAATTGGAACTaGTGCTCTCGGCATTGCTGC +
Preference number: 4 (lower is better)
Translates to: LRGEVEVVTIPPLMPQCARTNWN*CSRHCC
Trigger: GCAGCAATGCCGAGAGCAGCAGTTCCAATTTGTTCT...AGCACACTGTGGCATGAGGGGCGGGATTGTGACCACCTCTACCTCCCCTCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR GCA 90 bp CAGCAGCAGGAGAGGTGGTTGAGAAAGGCCTGGCTCAGAAGCTCCAGAACTGAACTGGCTTCTGGGAGCTaGTGGAGGAGAACAAATTGG +
Preference number: 4 (lower is better)
Translates to: QQQERWLRKAWLRSSRTELASGS*WRRTNW
Trigger: CCAATTTGTTCTCCTCCAGCAGCTCCCAGAAGCCAG...TTCAGTTCTGGAGCTTCTGAGCCAGGCCTTTCTCAACCACCTCTCCTGCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp GGAGTAGGAATGAGACGATGCGTGATGAGCTCAGTGTGCCACTTACAGAGGAAGCTGAGAAGCTGGACCTaGGGAGGACACTGGACAGCT +
Preference number: 4 (lower is better)
Translates to: GVGMRRCVMSSVCHLQRKLRSWT*GGHWTA
Trigger: AGCTGTCCAGTGTCCTCCGCAGGTCCAGCTTCTCAG...CTTCCTCTGTAAGTGGCACACTGAGCTCATCACGCATCGTCTCATTCCTACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGCTGAGAAGCTGGACCTaGGGAGGACACTGGACAGCT +
Preference number: 4 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKLRSWT*GGHWTA
Trigger: AGCTGTCCAGTGTCCTCCGCAGGTCCAGCTTCTCAG...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp CCCCTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGCTGAGAAGCTGGACCTaGGGAGGACACTGGACAGCT +
Preference number: 4 (lower is better)
Translates to: PLTRGSLDQDDLAALQAKLRSWT*GGHWTA
Trigger: AGCTGTCCAGTGTCCTCCGCAGGTCCAGCTTCTCAG...CTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR GCA 90 bp AGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGGCATGGTCTTCGGAACATaGCTTCCCCTGAGCACAGGT +
Preference number: 4 (lower is better)
Translates to: RPQTLEELGLAVSSTDRGMVFGT*LPLSTG
Trigger: ACCTGTGCTCAGGGGAAGGCATGTTCCGAAGACCAT...GCCTCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp GCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGTCACCTTCGAAGGCGGATCTTCTaGTTCAGCTCCTGGATCTCT +
Preference number: 4 (lower is better)
Translates to: AHLSSSAVTWRKSWMCHLRRRIF*FSSWIS
Trigger: AGAGATCCAGGAGCTGAAGCAGAAGATCCGCCTTCG...AAGGTGACACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp AGAAGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGATTCTTGGTGCGGATTTaGTGGCGCCGAAGGCGGATC +
Preference number: 4 (lower is better)
Translates to: RRPQTLEELGLAVSSTDRFLVRI*WRRRRI
Trigger: GATCCGCCTTCGGCGCCAGCAAATCCGCACCAAGAA...TCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp ATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTCCAGTTCGGAGCAGGTTCTTGGTaGGGATTTGCTGGCGCCGAA +
Preference number: 4 (lower is better)
Translates to: IRMIWLLSRLRNSSPFQFGAGSW*GFAGAE
Trigger: TTCGGCGCCAGCAAATCCGCACCAAGAACCTGCTCC...GAACTGGAAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR GCA 90 bp CCTCCCCTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTTCAGCAGACGTGGAGTaGAGGAAGCAGTGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PPLTRGSLDQDDLAALQASADVE*RKQWEK
Trigger: CTTCTCCCACTGCTTCCTGCACTCCACGTCTGCTGA...AGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAGGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR GCA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGGAGGCGGCTGGAAGCTaGATCCCCTCAAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKEAAGS*IPSNCF
Trigger: GAAGCAGTTTGAGGGGATGCAGCTTCCAGCCGCCTC...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGGGGCCCACTCCAAGTTaGCACGAACACGAATCCGCA +
Preference number: 4 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKGPTPS*HEHESA
Trigger: TGCGGATTCGTGTTCGTGGCAACTTGGAGTGGGCCC...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp CAGCAGCAGGAGAGGTGGTTGAGAAAGGCCTGGCTCAGAAGCTCCAGAACTGAACCGGATGCCACATCCTaGACAGCGGTAATTCTGCTT +
Preference number: 4 (lower is better)
Translates to: QQQERWLRKAWLRSSRTEPDATS*TAVILL
Trigger: AAGCAGAATTACCGCTGTGCAGGATGTGGCATCCGG...TTCAGTTCTGGAGCTTCTGAGCCAGGCCTTTCTCAACCACCTCTCCTGCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp AGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGGCCCGGATGCCACATCCTaGACAGCGGTAATTCTGCTT +
Preference number: 4 (lower is better)
Translates to: RPQTLEELGLAVSSTDRGPDATS*TAVILL
Trigger: AAGCAGAATTACCGCTGTGCAGGATGTGGCATCCGG...GCCTCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp TTCACAGCTGCCTCTGAGGTCTCTGAGGAGTCTAGGATAGTCAGGATTGTTCTGCACATGGGTAGCCCCTaGCCTGGTGAGCTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: FTAASEVSEESRIVRIVLHMGSP*PGELSK
Trigger: CTTGCTGAGCTCACCAGGGCAGGGGCTACCCATGTG...CAGAACAATCCTGACTATCCTAGACTCCTCAGAGACCTCAGAGGCAGCTGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp TTCACAGCTGCCTCTGAGGTCTCTGAGGAGTCTAGGATAGTCAGGATTGTTCTGAGGGAGGGCTGCACGTaGTTTCTTCAGGTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: FTAASEVSEESRIVRIVLREGCT*FLQVAS
Trigger: GGAGGCCACCTGAAGAAAGCACGTGCAGCCCTCCCT...CAGAACAATCCTGACTATCCTAGACTCCTCAGAGACCTCAGAGGCAGCTGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp GGAGTAGGAATGAGACGATGCGTGATGAGCTCAGTGTGCCACTTACAGAGGAAGAGAGTGGCTCAGTTCTaGAACAGGTGTGACCCGGCC +
Preference number: 4 (lower is better)
Translates to: GVGMRRCVMSSVCHLQRKRVAQF*NRCDPA
Trigger: GGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCT...CTTCCTCTGTAAGTGGCACACTGAGCTCATCACGCATCGTCTCATTCCTACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGCTGCCGACGGCTGACTaGACACAGACGTCAGACAAG +
Preference number: 4 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKLPTAD*TQTSDK
Trigger: CTTGTCTGACGTCTGTGTGCAGTCAGCCGTCGGCAG...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp GATGACTGCTGGACAAACACAACAGGAGCAGTTGCAGACAAAGTAGCTGAGGGAAGGACCCAGCTCTGCTaGAGGAAGGGGAGAGAACGG +
Preference number: 4 (lower is better)
Translates to: DDCWTNTTGAVADKVAEGRTQLC*RKGRER
Trigger: CCGTTCTCTCCCCTTCCTGCAGCAGAGCTGGGTCCT...TCCCTCAGCTACTTTGTCTGCAACTGCTCCTGTTGTGTTTGTCCAGCAGTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR GCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTCAAGAGAGGCGTCCCTaGCGCTTCGCCCTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTQERRP*RFALQG
Trigger: GCCCTGAAGGGCGAAGCGGCAGGGACGCCTCTCTTG...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR GCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTGCCAGTGCTCCCTCCTaGTCTCCTCAGGCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTASAPS*SPQAGA
Trigger: AGCGCCTGCCTGAGGAGAGCAGGAGGGAGCACTGGC...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR GCA 90 bp CCCCTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGAAGTCTACTCGGTCTTaGCCGGAGCTACCCAGGACC +
Preference number: 4 (lower is better)
Translates to: PLTRGSLDQDDLAALQAKKSTRS*PELPRT
Trigger: GGTCCTGGGTAGCTCCGGGCAAGACCGAGTAGACTT...CTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR GCA 90 bp CCTCCCCTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTCTCGGCCTCCCAAATTaGTGGGATGAGAGGCCTAAG +
Preference number: 4 (lower is better)
Translates to: PPLTRGSLDQDDLAALQALGLPN*WDERPK
Trigger: CTTAGGCCTCTCATCCCAGCAATTTGGGAGGCCGAG...AGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAGGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp GTTTACAAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTTGGGCTGAGAGGCAGTaGTACTGCAGGCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: VYKLSVTTDSGPINLPTAWAERQ*YCRLCC
Trigger: GCAGCACAGCCTGCAGTACCACTGCCTCTCAGCCCA...AGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTTGTAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTAGCAGGGGCCGGAGCTaGGCTGAGAGGCAGTGGTAC +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTSRGRS*AERQWY
Trigger: GTACCACTGCCTCTCAGCCCAGCTCCGGCCCCTGCT...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR CCA 90 bp AGTGGACGAAATGCCCATGACGTAGTCCTATTCTCTGCTGCTTCTCCTCGGGGCATGCCTCTATGGGGCTaGTCAGAGTACTGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: SGRNAHDVVLFSAASPRGMPLWG*SEYWSS
Trigger: TGAGCTCCAGTACTCTGACCAGCCCCATAGAGGCAT...GCCCCGAGGAGAAGCAGCAGAGAATAGGACTACGTCATGGGCATTTCGTCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGCCTGGGGAATCATTCTaGCTGCTGACCCAGGATGCC +
Preference number: 4 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKPGESF*LLTQDA
Trigger: GGCATCCTGGGTCAGCAGCCAGAATGATTCCCCAGG...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp CCCCTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGGTCCAAGTTGCCAATaGCCAGGTACTCAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: PLTRGSLDQDDLAALQAKGPSCQ*PGTQAP
Trigger: AGGGGCCTGAGTACCTGGCCATTGGCAACTTGGACC...CTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp CTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAAGCCCCTCTGAGAAGCTaGACCTGCGGAGGACACTGG +
Preference number: 4 (lower is better)
Translates to: LTRGSLDQDDLAALQAKEAPLRS*TCGGHW
Trigger: CCAGTGTCCTCCGCAGGTCCAGCTTCTCAGAGGGGC...TTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp CCCCTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGTTGGTGCGGATTTGCTaGCGCCGAAGGCGGATCTTC +
Preference number: 4 (lower is better)
Translates to: PLTRGSLDQDDLAALQAKLVRIC*RRRRIF
Trigger: GAAGATCCGCCTTCGGCGCCAGCAAATCCGCACCAA...CTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp GATGACTGCTGGACAAACACAACAGGAGCAGTTGCAGACAAAGTAGCTGAGGGACCGTGCTCAGCCTCCTaGTACATGGGGAGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: DDCWTNTTGAVADKVAEGPCSAS*YMGSRF
Trigger: GAACCTGCTCCCCATGTACCAGGAGGCTGAGCACGG...TCCCTCAGCTACTTTGTCTGCAACTGCTCCTGTTGTGTTTGTCCAGCAGTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CCA 90 bp CCCCTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGTCACGTGAGCTGAACTaGGAGCTGCTGGAGGTGACC +
Preference number: 4 (lower is better)
Translates to: PLTRGSLDQDDLAALQAKSRELN*ELLEVT
Trigger: GGTCACCTCCAGCAGCTCCCAGTTCAGCTCACGTGA...CTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGGCAGTGAGTCAGGAATaGGCAGGAGCTTCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKAVSQE*AGASEG
Trigger: CCCCTCAGAAGCTCCTGCCCATTCCTGACTCACTGC...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp CAGCAGCAGGAGAGGTGGTTGAGAAAGGCCTGGCTCAGAAGCTCCAGAACTGAAATCTGGGCATTCTCGTaGCAGCACTGGCAGAAGTAC +
Preference number: 4 (lower is better)
Translates to: QQQERWLRKAWLRSSRTEIWAFS*QHWQKY
Trigger: GTACTTCTGCCAGTGCTGCCACGAGAATGCCCAGAT...TTCAGTTCTGGAGCTTCTGAGCCAGGCCTTTCTCAACCACCTCTCCTGCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp GTTTACAAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTCTGGGGATGGCCATCTaGGCATTCTCGTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: VYKLSVTTDSGPINLPTALGMAI*AFSWQH
Trigger: GTGCTGCCACGAGAATGCCCAGATGGCCATCCCCAG...AGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTTGTAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp TCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTTGCGCAGAACCCGGCTaGGGATGGCCATCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: SLDQDDLAALQAKEQQPFCAEPG*GWPSGH
Trigger: ATGCCCAGATGGCCATCCCCAGCCGGGTTCTGCGCA...AAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp AAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTGACTGCAGGTCCTCTGTCAGGTaGCCTGGGACTGTGTCAAAG +
Preference number: 4 (lower is better)
Translates to: KLSVTTDSGPINLPTADCRSSVR*PGTVSK
Trigger: CTTTGACACAGTCCCAGGCCACCTGACAGAGGACCT...GCAGTCAGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp AGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGGCTTCAGTGAGTACAGGTaGAGGTCCTCTGTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: RPQTLEELGLAVSSTDRGFSEYR*RSSVRW
Trigger: CCACCTGACAGAGGACCTCCACCTGTACTCACTGAA...GCCTCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp CAGCAGCAGGAGAGGTGGTTGAGAAAGGCCTGGCTCAGAAGCTCCAGAACTGAATTCAGTGAGTACAGGTaGAGGTCCTCTGTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: QQQERWLRKAWLRSSRTEFSEYR*RSSVRW
Trigger: CCACCTGACAGAGGACCTCCACCTGTACTCACTGAA...TTCAGTTCTGGAGCTTCTGAGCCAGGCCTTTCTCAACCACCTCTCCTGCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp GGAGTAGGAATGAGACGATGCGTGATGAGCTCAGTGTGCCACTTACAGAGGAAGATGCATCTCTCCACATaGGTAGCCCCTGCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: GVGMRRCVMSSVCHLQRKMHLST*VAPALV
Trigger: CACCAGGGCAGGGGCTACCCATGTGGAGAGATGCAT...CTTCCTCTGTAAGTGGCACACTGAGCTCATCACGCATCGTCTCATTCCTACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp ATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTCCAGTTCATGCATCTCTCCACATaGGTAGCCCCTGCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: IRMIWLLSRLRNSSPFQFMHLST*VAPALV
Trigger: CACCAGGGCAGGGGCTACCCATGTGGAGAGATGCAT...GAACTGGAAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp TTCAAAGAGTGGCTCAGTTCTGCAACAGGTGTGACCCGGCCCGGAGGGAGGGCTGTCAGGATTGTTCTGTaGCCCCCAAAATACCCAAAT +
Preference number: 4 (lower is better)
Translates to: FKEWLSSATGVTRPGGRAVRIVL*PPKYPN
Trigger: ATTTGGGTATTTTGGGGGCCACAGAACAATCCTGAC...AGCCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCTTTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGCTTCAGCGACAGAGCTaGCGCCTCACGTATGCTTGC +
Preference number: 4 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKLQRQS*RLTYAC
Trigger: GCAAGCATACGTGAGGCGCCAGCTCTGTCGCTGAAG...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp CAGGACAGGGAGAGGGAAAACGCCATCCCCGTTTCAGCAGCAGGAGAGGTGGTTGAGAAGACATGCCCATaGGCAGAATTCAATCCCAGA +
Preference number: 4 (lower is better)
Translates to: QDRERENAIPVSAAGEVVEKTCP*AEFNPR
Trigger: TCTGGGATTGAATTCTGCCCATGGGCATGTCTTCTC...AACCACCTCTCCTGCTGCTGAAACGGGGATGGCGTTTTCCCTCTCCCTGTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp TTCCACCAACCACAGGCAACTTTCCGCTCAGCTTCCAGGGCAGCACCCACGCCCTCTTCTAGCCCTACATaGCTTTCAGATCCCAACTTT +
Preference number: 4 (lower is better)
Translates to: FHQPQATFRSASRAAPTPSSSPT*LSDPNF
Trigger: AAAGTTGGGATCTGAAAGCCATGTAGGGCTAGAAGA...GGGCGTGGGTGCTGCCCTGGAAGCTGAGCGGAAAGTTGCCTGTGGTTGGTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp GAAGTGGTTCGCTCGAGGTCTCATGGCAAGTTAGAGACACAGCCACTCCACCTCTCCAGCGCAGTGACCTaGAGAAAGAGCTGGATGTGT +
Preference number: 4 (lower is better)
Translates to: EVVRSRSHGKLETQPLHLSSAVT*RKSWMC
Trigger: ACACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGA...GAGGTGGAGTGGCTGTGTCTCTAACTTGCCATGAGACCTCGAGCGAACCACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp GCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGTCACCTTTCCAGCGCAGTGACCTaGAGAAAGAGCTGGATGTGT +
Preference number: 4 (lower is better)
Translates to: AHLSSSAVTWRKSWMCHLSSAVT*RKSWMC
Trigger: ACACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGA...AAGGTGACACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp CAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGACTCGCACTCCTTTTACACGATCTAAAGGGATaGGGTGCGGTTGAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: QSTGGTHGTSLLRLALLLHDLKG*GAVEGA
Trigger: AGCTCCCTCAACCGCACCCCATCCCTTTAGATCGTG...TAAAAGGAGTGCGAGTCTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp GAAGTGGTTCGCTCGAGGTCTCATGGCAAGTTAGAGACACAGCCACTCCACCTCTCGCTCGAGGTCTCATaGCAAGTTAGAGACACAGCC +
Preference number: 4 (lower is better)
Translates to: EVVRSRSHGKLETQPLHLSLEVS*QVRDTA
Trigger: GGCTGTGTCTCTAACTTGCCATGAGACCTCGAGCGA...GAGGTGGAGTGGCTGTGTCTCTAACTTGCCATGAGACCTCGAGCGAACCACTTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGGAGCTGGAGCTCCAGTaGGCCAGGAGCAGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKELELQ*ARSRRE
Trigger: TTCTCTTCTGCTCCTGGCCCACTGGAGCTCCAGCTC...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp CCTCCCCTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTATTCTGGAGCTCCCCTaGAGGCAATGCTGGTATCCG +
Preference number: 4 (lower is better)
Translates to: PPLTRGSLDQDDLAALQAILELP*RQCWYP
Trigger: CGGATACCAGCATTGCCTCCAGGGGAGCTCCAGAAT...AGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAGGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp AGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGGCCAGGATGGAGTGCAATaGAGCAAGCTTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: RPQTLEELGLAVSSTDRGQDGVQ*SKLGSL
Trigger: CAGTGAGCCAAGCTTGCTCCATTGCACTCCATCCTG...GCCTCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR TCA 90 bp TTCCACCAACCACAGGCAACTTTCCGCTCAGCTTCCAGGGCAGCACCCACGCCCCTGTGTAGAATTTTCTaGTATACTGTCTATCCCCGA +
Preference number: 4 (lower is better)
Translates to: FHQPQATFRSASRAAPTPLCRIF*YTVYPR
Trigger: TCGGGGATAGACAGTATATCAGAAAATTCTACACAG...GGGCGTGGGTGCTGCCCTGGAAGCTGAGCGGAAAGTTGCCTGTGGTTGGTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGACTGCAGCATGGCCGTaGCATGAGCGTCACTTAGCA +
Preference number: 4 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKTAAWP*HERHLA
Trigger: TGCTAAGTGACGCTCATGTCACGGCCATGCTGCAGT...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTATGGACGCATCGATCTaGGCCAGGAGGCGGGGGTTG +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTMDASI*ARRRGL
Trigger: CAACCCCCGCCTCCTGGCTCAGATCGATGCGTCCAT...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR TCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTGAGTGTCTGCCCCTCTaGGAAGCTGGACCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTECLPL*EAGPAE
Trigger: CTCCGCAGGTCCAGCTTCTCAGAGGGGCAGACACTC...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR TCA 90 bp AGAAGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGAGAGCTGGGTGTGCTaGCTTCACTGCTTTGACCAG +
Preference number: 4 (lower is better)
Translates to: RRPQTLEELGLAVSSTDRESWVC*LHCFDQ
Trigger: CTGGTCAAAGCAGTGAAGTCAGCACACCCAGCTCTC...TCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp GAGCCTGGCCTGAGCATCAGTTCTGTTCTTTGCTTCAAGATCACCAAGGTAGATGAACATGCCTTCCCCTaGGCACAGGTACCGACCACC +
Preference number: 4 (lower is better)
Translates to: EPGLSISSVLCFKITKVDEHAFP*AQVPTT
Trigger: GGTGGTCGGTACCTGTGCTCAGGGGAAGGCATGTTC...ATCTACCTTGGTGATCTTGAAGCAAAGAACAGAACTGATGCTCAGGCCAGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp TCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTGAACATGCCTTCCCCTaGGCACAGGTACCGACCACC +
Preference number: 4 (lower is better)
Translates to: SLDQDDLAALQAKEQQPFEHAFP*AQVPTT
Trigger: GGTGGTCGGTACCTGTGCTCAGGGGAAGGCATGTTC...AAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR TCA 90 bp AGAAGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGAGGGACTGTCCTTCTaGTGGTCTTCGGAACATGCC +
Preference number: 4 (lower is better)
Translates to: RRPQTLEELGLAVSSTDREGLSF*WSSEHA
Trigger: GGCATGTTCCGAAGACCATCAGAAGGACAGTCCCTC...TCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp TCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTCCGAATCACGTGAGCTaGACTGGGAGCTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: SLDQDDLAALQAKEQQPFPNHVS*TGSCWR
Trigger: CCTCCAGCAGCTCCCAGTTCAGCTCACGTGATTCGG...AAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR TCA 90 bp CAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGACTCGCACTCCTTTTAAGTACCGCAGTCGCTTaGTGTAATCAGGGTCAGTCC +
Preference number: 4 (lower is better)
Translates to: QSTGGTHGTSLLRLALLLSTAVA*CNQGQS
Trigger: GGACTGACCCTGATTACATCAAGCGACTGCGGTACT...TAAAAGGAGTGCGAGTCTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp CCTCCCCTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAGTACCGCAGTCGCTTaGTGTAATCAGGGTCAGTCC +
Preference number: 4 (lower is better)
Translates to: PPLTRGSLDQDDLAALQASTAVA*CNQGQS
Trigger: GGACTGACCCTGATTACATCAAGCGACTGCGGTACT...AGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAGGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR TCA 90 bp AGTGGACGAAATGCCCATGACGTAGTCCTATTCTCTGCTGCTTCTCCTCGGGGCGACAGAACTCACAGATaGAGCCTTTGGCTTGGCAGA +
Preference number: 4 (lower is better)
Translates to: SGRNAHDVVLFSAASPRGDRTHR*SLWLGR
Trigger: TCTGCCAAGCCAAAGGCTTCATCTGTGAGTTCTGTC...GCCCCGAGGAGAAGCAGCAGAGAATAGGACTACGTCATGGGCATTTCGTCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGCTCCTCCTCGTAGTCTaGCAGGTAAGACTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKLLLVV*QVRLQA
Trigger: AGCCTGGAGTCTTACCTGTCAGACTACGAGGAGGAG...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp GAGCCTGGCCTGAGCATCAGTTCTGTTCTTTGCTTCAAGATCACCAAGGTAGATCAACCTGCCGACGGCTaGCTGCACACAGACGTCAGA +
Preference number: 4 (lower is better)
Translates to: EPGLSISSVLCFKITKVDQPADG*LHTDVR
Trigger: TCTGACGTCTGTGTGCAGTCAGCCGTCGGCAGGTTG...ATCTACCTTGGTGATCTTGAAGCAAAGAACAGAACTGATGCTCAGGCCAGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp AGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGGCCCCGCATGTCAGTTCTaGTGGAAACACCTGGTGTTT +
Preference number: 4 (lower is better)
Translates to: RPQTLEELGLAVSSTDRGPACQF*WKHLVF
Trigger: AAACACCAGGTGTTTCCATCAGAACTGACATGCGGG...GCCTCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp AGTGGACGAAATGCCCATGACGTAGTCCTATTCTCTGCTGCTTCTCCTCGGGGCCCCGCATGTCAGTTCTaGTGGAAACACCTGGTGTTT +
Preference number: 4 (lower is better)
Translates to: SGRNAHDVVLFSAASPRGPACQF*WKHLVF
Trigger: AAACACCAGGTGTTTCCATCAGAACTGACATGCGGG...GCCCCGAGGAGAAGCAGCAGAGAATAGGACTACGTCATGGGCATTTCGTCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp CAGCAGCAGGAGAGGTGGTTGAGAAAGGCCTGGCTCAGAAGCTCCAGAACTGAATGGACGAAATGCCCATaGCGTAGTCCTATTCTCTGC +
Preference number: 4 (lower is better)
Translates to: QQQERWLRKAWLRSSRTEWTKCP*RSPILC
Trigger: GCAGAGAATAGGACTACGTCATGGGCATTTCGTCCA...TTCAGTTCTGGAGCTTCTGAGCCAGGCCTTTCTCAACCACCTCTCCTGCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp CAAGACGGCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGATTCTTAAAGCTCCCTaGAGGACCTGGGCACTTCTA +
Preference number: 4 (lower is better)
Translates to: QDGTSVLQRSDLEKELDVILKAP*RTWALL
Trigger: TAGAAGTGCCCAGGTCCTTCAGGGAGCTTTAAGAAT...CACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGCCGTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp GCCACCGTGCCTGGCCAACACTTCTTGAGTGAAAGTCTACTCGGTCTTGCCCGGCCGTTCTTTGATATGTaGGTCAGGTTAGATCCTTCG +
Preference number: 4 (lower is better)
Translates to: ATVPGQHFLSESLLGLARPFFDM*VRLDPS
Trigger: CGAAGGATCTAACCTGACTCACATATCAAAGAACGG...CCGGGCAAGACCGAGTAGACTTTCACTCAAGAAGTGTTGGCCAGGCACGGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR GCA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGCGTCACTGCAGCGTTTaGTTTGCGTTCAGATGCGGC +
Preference number: 4 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKRHCSV*FAFRCG
Trigger: GCCGCATCTGAACGCAAAGCAAACGCTGCAGTGACG...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273582.9
CDS-3UTR GCA 90 bp GTTTACAAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTTGCTCTGCATGTCCCTaGAAAGCCGCTCCAAGCCAC +
Preference number: 4 (lower is better)
Translates to: VYKLSVTTDSGPINLPTACSACP*KAAPSH
Trigger: GTGGCTTGGAGCGGCTTTGCAGGGACATGCAGAGCA...AGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTTGTAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp AGAAGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGATGGCACCATCAGCACTaGTCTGGTCGTTCTCGTGCA +
Preference number: 4 (lower is better)
Translates to: RRPQTLEELGLAVSSTDRWHHQH*SGRSRA
Trigger: TGCACGAGAACGACCAGAGCAGTGCTGATGGTGCCA...TCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCTTCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp TGTGGCCCCCAAAATACCCAAATAAGTGGACGAAATGCCCATGACGTAGTCCTATGGTACTGCAGGCTGTaGTGCAGCCACAGCTCGGCA +
Preference number: 4 (lower is better)
Translates to: CGPQNTQISGRNAHDVVLWYCRL*CSHSSA
Trigger: TGCCGAGCTGTGGCTGCAGCACAGCCTGCAGTACCA...TAGGACTACGTCATGGGCATTTCGTCCACTTATTTGGGTATTTTGGGGGCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp GCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGTCACCTTGTTGTTCTGTTCCACTaGTTCCAGGCACTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: AHLSSSAVTWRKSWMCHLVVLFH*FQALQH
Trigger: ATGCTGCAGTGCCTGGAAGCAGTGGAACAGAACAAC...AAGGTGACACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp AGAAGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAAGGAGCGGGCTCTCGTaGTTTCTGGCAAACATGGAC +
Preference number: 4 (lower is better)
Translates to: RRPQTLEELGLAVSSTDRRSGLS*FLANMD
Trigger: GTCCATGTTTGCCAGAAAGCACGAGAGCCCGCTCCT...TCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp CCCCTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGTGAGACGTGCCCTCTaGTTTCTTGAGGTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: PLTRGSLDQDDLAALQAKVRRAL*FLEVSG
Trigger: CCCGGAAACCTCAAGAAAGCAGAGGGCACGTCTCAC...CTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR GCA 90 bp CAAGACGGCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGACAAATTGGAACTGCTaGTCTCGGCATTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: QDGTSVLQRSDLEKELDVTNWNC*SRHCCC
Trigger: ACAGCAGCAATGCCGAGAGCAGCAGTTCCAATTTGT...CACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGCCGTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGGTGACAGTGAGTGTCTaGCCCTCTGAGAAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKVTVSV*PSEKLD
Trigger: GTCCAGCTTCTCAGAGGGGCAGACACTCACTGTCAC...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp GTTTACAAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTCTCCCCTGGAGGCAATaGTGGTATCCGAATGGGAGC +
Preference number: 4 (lower is better)
Translates to: VYKLSVTTDSGPINLPTALPWRQ*WYPNGS
Trigger: GCTCCCATTCGGATACCAGCATTGCCTCCAGGGGAG...AGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTTGTAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp ATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTCCAGTTCACCCGAAAGCTTCCGTaGTCAGCCTCCTGGTACATG +
Preference number: 4 (lower is better)
Translates to: IRMIWLLSRLRNSSPFQFTRKLP*SASWYM
Trigger: CATGTACCAGGAGGCTGAGCACGGAAGCTTTCGGGT...GAACTGGAAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR GCA 90 bp AGAAGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGATCAGCAGACGTGGAGTaGAGGAAGCAGTGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: RRPQTLEELGLAVSSTDRSADVE*RKQWEK
Trigger: CTTCTCCCACTGCTTCCTGCACTCCACGTCTGCTGA...TCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp GTTTACAAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTGAGGCGGCTGGAAGCTaGATCCCCTCAAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: VYKLSVTTDSGPINLPTAEAAGS*IPSNCF
Trigger: GAAGCAGTTTGAGGGGATGCAGCTTCCAGCCGCCTC...AGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTTGTAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp TTCACAGCTGCCTCTGAGGTCTCTGAGGAGTCTAGGATAGTCAGGATTGTTCTGGGGCCCACTCCAAGTTaGCACGAACACGAATCCGCA +
Preference number: 4 (lower is better)
Translates to: FTAASEVSEESRIVRIVLGPTPS*HEHESA
Trigger: TGCGGATTCGTGTTCGTGGCAACTTGGAGTGGGCCC...CAGAACAATCCTGACTATCCTAGACTCCTCAGAGACCTCAGAGGCAGCTGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp GCCACCGTGCCTGGCCAACACTTCTTGAGTGAAAGTCTACTCGGTCTTGCCCGGGCACTGTTTATGTCCTaGACGTTGAAGAGAGGATCA +
Preference number: 4 (lower is better)
Translates to: ATVPGQHFLSESLLGLARALFMS*TLKRGS
Trigger: TGATCCTCTCTTCAACGTGCAGGACATAAACAGTGC...CCGGGCAAGACCGAGTAGACTTTCACTCAAGAAGTGTTGGCCAGGCACGGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR GCA 90 bp CAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGACTCGCACTCCTTTTAAGTCCTATTCTCTGCTaGTTCTCCTCGGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: QSTGGTHGTSLLRLALLLSPILC*FSSGHS
Trigger: ACTGTGCCCCGAGGAGAAGCAGCAGAGAATAGGACT...TAAAAGGAGTGCGAGTCTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp AAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTGACTGCAGTCCTATTCTCTGCTaGTTCTCCTCGGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: KLSVTTDSGPINLPTADCSPILC*FSSGHS
Trigger: ACTGTGCCCCGAGGAGAAGCAGCAGAGAATAGGACT...GCAGTCAGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp TTCACAGCTGCCTCTGAGGTCTCTGAGGAGTCTAGGATAGTCAGGATTGTTCTGCGCCTCACGTATGCTTaGGGCGTAAGGCTACAGGTG +
Preference number: 4 (lower is better)
Translates to: FTAASEVSEESRIVRIVLRLTYA*GVRLQV
Trigger: CACCTGTAGCCTTACGCCGCAAGCATACGTGAGGCG...CAGAACAATCCTGACTATCCTAGACTCCTCAGAGACCTCAGAGGCAGCTGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp AAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTGACTGCAATGAACTGCCAGGCTaGACAAGCACCACAGCAGGT +
Preference number: 4 (lower is better)
Translates to: KLSVTTDSGPINLPTADCNELPG*TSTTAG
Trigger: ACCTGCTGTGGTGCTTGTGCAGCCTGGCAGTTCATT...GCAGTCAGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp GCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGTCACCTTGTAGGAATGAGACGATaGGTGATGAGCTCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: AHLSSSAVTWRKSWMCHLVGMRR*VMSSVC
Trigger: GCACACTGAGCTCATCACGCATCGTCTCATTCCTAC...AAGGTGACACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp CACCTCATTTTAAGTGACAGTTACACCATGCACCAGAAACCCAGAGAAGTGAAGCAAGAGAGGCGTCCCTaGCGCTTCGCCCTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: HLILSDSYTMHQKPREVKQERRP*RFALQG
Trigger: GCCCTGAAGGGCGAAGCGGCAGGGACGCCTCTCTTG...CTTCACTTCTCTGGGTTTCTGGTGCATGGTGTAACTGTCACTTAAAATGAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR GCA 90 bp ATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTCCAGTTCCTCTCCCAGACTTCGCCTTATCATTaGAGGATTCTGGAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: IWLLSRLRNSSPFQFLSQTSPYH*RILELP
Trigger: GGGGAGCTCCAGAATCCTGCAATGATAAGGCGAAGT...CTGGGAGAGGAACTGGAAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR GCA 90 bp TTCACAGCTGCCTCTGAGGTCTCTGAGGAGTCTAGGATAGTCAGGATTGTTCTGCAATCCCGCCCCTCATaGCACAGTGTGCTGGTGCTT +
Preference number: 4 (lower is better)
Translates to: FTAASEVSEESRIVRIVLQSRPS*HSVLVL
Trigger: AAGCACCAGCACACTGTGGCATGAGGGGCGGGATTG...CAGAACAATCCTGACTATCCTAGACTCCTCAGAGACCTCAGAGGCAGCTGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CCA 90 bp GTTTACAAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTCCATCAGCACTGCTCTaGTCGTTCTCGTGCACGCTG +
Preference number: 4 (lower is better)
Translates to: VYKLSVTTDSGPINLPTAPSALL*SFSCTL
Trigger: CAGCGTGCACGAGAACGACCAGAGCAGTGCTGATGG...AGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTTGTAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp GAAGTGGTTCGCTCGAGGTCTCATGGCAAGTTAGAGACACAGCCACTCCACCTCGCTTTCTGGCAAACATaGACGCATCGATCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: EVVRSRSHGKLETQPLHLAFWQT*THRSEP
Trigger: TGGCTCAGATCGATGCGTCCATGTTTGCCAGAAAGC...GAGGTGGAGTGGCTGTGTCTCTAACTTGCCATGAGACCTCGAGCGAACCACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp AAGGGGAGAGAACGGAGTCGGGTTGTACTTTTACTCAGAAGCACAACGACCATCAGGGCTGTCAGGCTCTaGCTCTTTGTCACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: KGRERSRVVLLLRSTTTIRAVRL*LFVTRS
Trigger: GCTCCTGGTGACAAAGAGCCAGAGCCTGACAGCCCT...GATGGTCGTTGTGCTTCTGAGTAAAAGTACAACCCGACTCCGTTCTCTCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp TTCACAGCTGCCTCTGAGGTCTCTGAGGAGTCTAGGATAGTCAGGATTGTTCTGGGGTGTATGTGGAACTaGGCAGGGCTGTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: FTAASEVSEESRIVRIVLGCMWN*AGLSGS
Trigger: AGAGCCTGACAGCCCTGCCCAGTTCCACATACACCC...CAGAACAATCCTGACTATCCTAGACTCCTCAGAGACCTCAGAGGCAGCTGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp CAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGACTCGCACTCCTTTTAATGCCTCTATGGGGCTaGTCAGAGTACTGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: QSTGGTHGTSLLRLALLLMPLWG*SEYWSS
Trigger: TGAGCTCCAGTACTCTGACCAGCCCCATAGAGGCAT...TAAAAGGAGTGCGAGTCTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp CCTCCCCTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTATGCCTCTATGGGGCTaGTCAGAGTACTGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: PPLTRGSLDQDDLAALQAMPLWG*SEYWSS
Trigger: TGAGCTCCAGTACTCTGACCAGCCCCATAGAGGCAT...AGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAGGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp AAGGGGAGAGAACGGAGTCGGGTTGTACTTTTACTCAGAAGCACAACGACCATCCCCAGGATGCCTCTATaGGGCTGGTCAGAGTACTGG +
Preference number: 4 (lower is better)
Translates to: KGRERSRVVLLLRSTTTIPRMPL*GWSEYW
Trigger: CCAGTACTCTGACCAGCCCCATAGAGGCATCCTGGG...GATGGTCGTTGTGCTTCTGAGTAAAAGTACAACCCGACTCCGTTCTCTCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTTGTGACTCTGACAGCTaGCAGTCCGGCCTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTCDSDS*QSGLGG
Trigger: ACCCCCGAGGCCGGACTGCCAGCTGTCAGAGTCACA...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR CCA 90 bp CAGCAGCAGGAGAGGTGGTTGAGAAAGGCCTGGCTCAGAAGCTCCAGAACTGAAGCTTCTGGGAGCTGCTaGAGGAGAACAAATTGGAAC +
Preference number: 4 (lower is better)
Translates to: QQQERWLRKAWLRSSRTEASGSC*RRTNWN
Trigger: GTTCCAATTTGTTCTCCTCCAGCAGCTCCCAGAAGC...TTCAGTTCTGGAGCTTCTGAGCCAGGCCTTTCTCAACCACCTCTCCTGCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp ATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTCCAGTTCCTCTCCCAGGCTTCTGGGAGCTGCTaGAGGAGAACAAATTGGAAC +
Preference number: 4 (lower is better)
Translates to: IWLLSRLRNSSPFQFLSQASGSC*RRTNWN
Trigger: GTTCCAATTTGTTCTCCTCCAGCAGCTCCCAGAAGC...CTGGGAGAGGAACTGGAAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTACCTGCGGAGGACACTaGACAGCTGGCTCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTTCGGH*TAGSPH
Trigger: GTGGGGAGAGCCAGCTGTCCAGTGTCCTCCGCAGGT...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR CCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTGCCCCTCTGAGAAGCTaGACCTGCGGAGGACACTGG +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTAPLRS*TCGGHW
Trigger: CCAGTGTCCTCCGCAGGTCCAGCTTCTCAGAGGGGC...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR CCA 90 bp CCCCTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGCCCTGGAGGCAATGCTaGTATCCGAATGGGAGCGAA +
Preference number: 4 (lower is better)
Translates to: PLTRGSLDQDDLAALQAKPWRQC*YPNGSE
Trigger: TTCGCTCCCATTCGGATACCAGCATTGCCTCCAGGG...CTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp TGTGGCCCCCAAAATACCCAAATAAGTGGACGAAATGCCCATGACGTAGTCCTACTCCTGGAGCTCCCCTaGAGGCAATGCTGGTATCCG +
Preference number: 4 (lower is better)
Translates to: CGPQNTQISGRNAHDVVLLLELP*RQCWYP
Trigger: CGGATACCAGCATTGCCTCCAGGGGAGCTCCAGGAG...TAGGACTACGTCATGGGCATTTCGTCCACTTATTTGGGTATTTTGGGGGCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000413360.5
CDS-3UTR CCA 90 bp GTGAAAGTCTACTCGGTCTTGCCCGGAGCTACCCAGGACCACAGCCAGCACCAGACTTCATTAGCTCGATaGCAGCAATTAAGGACTCTG +
Preference number: 4 (lower is better)
Translates to: VKVYSVLPGATQDHSQHQTSLAR*QQLRTL
Trigger: CAGAGTCCTTAATTGCTGCCATCGAGCTAATGAAGT...CTGGTGCTGGCTGTGGTCCTGGGTAGCTCCGGGCAAGACCGAGTAGACTTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp GCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGTCACCTTTCCTCCTCTAGGCACTaGCTCATCATGTTGCACTTC +
Preference number: 4 (lower is better)
Translates to: AHLSSSAVTWRKSWMCHLSSSRH*LIMLHF
Trigger: GAAGTGCAACATGATGAGCCAGTGCCTAGAGGAGGA...AAGGTGACACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp GTTTACAAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTTTGGTGCGGATTTGCTaGCGCCGAAGGCGGATCTTC +
Preference number: 4 (lower is better)
Translates to: VYKLSVTTDSGPINLPTALVRIC*RRRRIF
Trigger: GAAGATCCGCCTTCGGCGCCAGCAAATCCGCACCAA...AGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTTGTAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp GTTTACAAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTCAGCCTCCTGGTACATaGGGAGCAGGTTCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: VYKLSVTTDSGPINLPTAQPPGT*GAGSWC
Trigger: GCACCAAGAACCTGCTCCCCATGTACCAGGAGGCTG...AGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTTGTAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp TTCACAGCTGCCTCTGAGGTCTCTGAGGAGTCTAGGATAGTCAGGATTGTTCTGCAGCCTCCTGGTACATaGGGAGCAGGTTCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: FTAASEVSEESRIVRIVLQPPGT*GAGSWC
Trigger: GCACCAAGAACCTGCTCCCCATGTACCAGGAGGCTG...CAGAACAATCCTGACTATCCTAGACTCCTCAGAGACCTCAGAGGCAGCTGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp GAGCCTGGCCTGAGCATCAGTTCTGTTCTTTGCTTCAAGATCACCAAGGTAGATCCGTGCTCAGCCTCCTaGTACATGGGGAGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: EPGLSISSVLCFKITKVDPCSAS*YMGSRF
Trigger: GAACCTGCTCCCCATGTACCAGGAGGCTGAGCACGG...ATCTACCTTGGTGATCTTGAAGCAAAGAACAGAACTGATGCTCAGGCCAGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp AAGGGGAGAGAACGGAGTCGGGTTGTACTTTTACTCAGAAGCACAACGACCATCTCACGTGAGCTGAACTaGGAGCTGCTGGAGGTGACC +
Preference number: 4 (lower is better)
Translates to: KGRERSRVVLLLRSTTTISRELN*ELLEVT
Trigger: GGTCACCTCCAGCAGCTCCCAGTTCAGCTCACGTGA...GATGGTCGTTGTGCTTCTGAGTAAAAGTACAACCCGACTCCGTTCTCTCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp AGTGGACGAAATGCCCATGACGTAGTCCTATTCTCTGCTGCTTCTCCTCGGGGCCAGTGGGAGAAGGACTaGGAGGAAACGAAGGATTTG +
Preference number: 4 (lower is better)
Translates to: SGRNAHDVVLFSAASPRGQWEKD*EETKDL
Trigger: CAAATCCTTCGTTTCCTCCCAGTCCTTCTCCCACTG...GCCCCGAGGAGAAGCAGCAGAGAATAGGACTACGTCATGGGCATTTCGTCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp CTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAACAGCTCCGAGGCGGCTaGAAGCTGCATCCCCTCAAA +
Preference number: 4 (lower is better)
Translates to: LTRGSLDQDDLAALQAKEQLRGG*KLHPLK
Trigger: TTTGAGGGGATGCAGCTTCCAGCCGCCTCGGAGCTG...TTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp GTTTACAAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTGCAGTGAGTCAGGAATaGGCAGGAGCTTCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: VYKLSVTTDSGPINLPTAAVSQE*AGASEG
Trigger: CCCCTCAGAAGCTCCTGCCCATTCCTGACTCACTGC...AGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTTGTAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp TTCAAAGAGTGGCTCAGTTCTGCAACAGGTGTGACCCGGCCCGGAGGGAGGGCTGGCAATTTTCCTCGTTaGGGCTGGATGAACATTAAA +
Preference number: 4 (lower is better)
Translates to: FKEWLSSATGVTRPGGRAGNFPR*GWMNIK
Trigger: TTTAATGTTCATCCAGCCCCAACGAGGAAAATTGCC...AGCCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCTTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp TCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTCTGGGGATGGCCATCTaGGCATTCTCGTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: SLDQDDLAALQAKEQQPFLGMAI*AFSWQH
Trigger: GTGCTGCCACGAGAATGCCCAGATGGCCATCCCCAG...AAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp AGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGGCGACGCTGGAAGAACTTaGTCTTGCTGTCTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: RPQTLEELGLAVSSTDRGDAGRT*SCCLFH
Trigger: GTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTC...GCCTCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp AGTGGACGAAATGCCCATGACGTAGTCCTATTCTCTGCTGCTTCTCCTCGGGGCGACGCTGGAAGAACTTaGTCTTGCTGTCTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: SGRNAHDVVLFSAASPRGDAGRT*SCCLFH
Trigger: GTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTC...GCCCCGAGGAGAAGCAGCAGAGAATAGGACTACGTCATGGGCATTTCGTCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp AGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGGCACGCTAAGAAGATGGTaGGTGAGGTTCCTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: RPQTLEELGLAVSSTDRGTLRRW*VRFLSS
Trigger: TGAGGACAGGAACCTCACCCACCATCTTCTTAGCGT...GCCTCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp AGTGGACGAAATGCCCATGACGTAGTCCTATTCTCTGCTGCTTCTCCTCGGGGCTCACAAACACACACATaGCCCCACCCAAGGACTTCA +
Preference number: 4 (lower is better)
Translates to: SGRNAHDVVLFSAASPRGSQTHT*PHPRTS
Trigger: TGAAGTCCTTGGGTGGGGCCATGTGTGTGTTTGTGA...GCCCCGAGGAGAAGCAGCAGAGAATAGGACTACGTCATGGGCATTTCGTCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp GTTTACAAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTCCTCTCCCACTTCCCTaGGAGACTCCTTCTTACCGC +
Preference number: 4 (lower is better)
Translates to: VYKLSVTTDSGPINLPTAPLPLP*ETPSYR
Trigger: GCGGTAAGAAGGAGTCTCCCAGGGAAGTGGGAGAGG...AGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTTGTAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp TTCCACCAACCACAGGCAACTTTCCGCTCAGCTTCCAGGGCAGCACCCACGCCCAGAACTTCTGGGACTTaGCTTTTTGAGTCTCACTAT +
Preference number: 4 (lower is better)
Translates to: FHQPQATFRSASRAAPTPRTSGT*LFESHY
Trigger: ATAGTGAGACTCAAAAAGCCAAGTCCCAGAAGTTCT...GGGCGTGGGTGCTGCCCTGGAAGCTGAGCGGAAAGTTGCCTGTGGTTGGTGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp AGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGGCTTGTACTCTCAGCTCTaGCATGGTGTCTGGAACACG +
Preference number: 4 (lower is better)
Translates to: RPQTLEELGLAVSSTDRGLYSQL*HGVWNT
Trigger: CGTGTTCCAGACACCATGCCAGAGCTGAGAGTACAA...GCCTCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
3UTR CAA 72 bp CCTCCCCTCACTCGAGGTTCTTTAGATCAGGATGATTaGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTT +
Preference number: 4 (lower is better)
Translates to: PPLTRGSLDQDD*AALQAKEQQPF
Trigger: AAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAGGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR TCA 90 bp AAGGGGAGAGAACGGAGTCGGGTTGTACTTTTACTCAGAAGCACAACGACCATCGTTGGGGCTGTTGGTTaGTACCAAACCCTCCACCGT +
Preference number: 4 (lower is better)
Translates to: KGRERSRVVLLLRSTTTIVGAVG*YQTLHR
Trigger: ACGGTGGAGGGTTTGGTATCAACCAACAGCCCCAAC...GATGGTCGTTGTGCTTCTGAGTAAAAGTACAACCCGACTCCGTTCTCTCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp TTCACAGCTGCCTCTGAGGTCTCTGAGGAGTCTAGGATAGTCAGGATTGTTCTGGTTGGGGCTGTTGGTTaGTACCAAACCCTCCACCGT +
Preference number: 4 (lower is better)
Translates to: FTAASEVSEESRIVRIVLVGAVG*YQTLHR
Trigger: ACGGTGGAGGGTTTGGTATCAACCAACAGCCCCAAC...CAGAACAATCCTGACTATCCTAGACTCCTCAGAGACCTCAGAGGCAGCTGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTGGGCTGAGTGGGGACTaGGCCACCGGATGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTGLSGD*ATGCLS
Trigger: TGAAAGACATCCGGTGGCTCAGTCCCCACTCAGCCC...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR TCA 90 bp AGAATTCAATCCCAGAACAAAAATGATGCAGGCTTTAGTTCACAGAGCTGCCAGCTCCACGTGAAGGGCTaGGTGGGGACTGAGCCACCG +
Preference number: 4 (lower is better)
Translates to: RIQSQNKNDAGFSSQSCQLHVKG*VGTEPP
Trigger: CGGTGGCTCAGTCCCCACTCAGCCCTTCACGTGGAG...CTGGCAGCTCTGTGAACTAAAGCCTGCATCATTTTTGTTCTGGGATTGAATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp AAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTGACTGCAGTAGATCTTCTCTCTaGGCCATTGTTGGGCACGGA +
Preference number: 4 (lower is better)
Translates to: KLSVTTDSGPINLPTADCSRSSL*AIVGHG
Trigger: TCCGTGCCCAACAATGGCTCAGAGAGAAGATCTACT...GCAGTCAGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp TCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATTCACAGCTGCCTCTGCCCTCTGCTTTCTTaGGGTTTCCGGGGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SNISNRNSRQHRDIHSCLCPLLS*GFRGGP
Trigger: TGGCCCTCCCCGGAAACCTCAAGAAAGCAGAGGGCA...GAGGCAGCTGTGAATGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTTGCCCTCTGCTTTCTTaGGGTTTCCGGGGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTCPLLS*GFRGGP
Trigger: TGGCCCTCCCCGGAAACCTCAAGAAAGCAGAGGGCA...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR TCA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGAATCATTCTGGCTGCTaGCCCAGGATGCCTCTATGG +
Preference number: 4 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKNHSGC*PRMPLW
Trigger: CCATAGAGGCATCCTGGGTCAGCAGCCAGAATGATT...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp GTTTACAAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTGAGAGCTGGGTGTGCTaGCTTCACTGCTTTGACCAG +
Preference number: 4 (lower is better)
Translates to: VYKLSVTTDSGPINLPTAESWVC*LHCFDQ
Trigger: CTGGTCAAAGCAGTGAAGTCAGCACACCCAGCTCTC...AGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTTGTAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGAGTACCGCAGTCGCTTaGTGTAATCAGGGTCAGTCC +
Preference number: 4 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKSTAVA*CNQGQS
Trigger: GGACTGACCCTGATTACATCAAGCGACTGCGGTACT...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp CTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAACGCAGCAGCCGGACTTaGTTGAGCAGCTTGACCTTC +
Preference number: 4 (lower is better)
Translates to: LTRGSLDQDDLAALQAKERSSRT*LSSLTF
Trigger: GAAGGTCAAGCTGCTCAATCAAGTCCGGCTGCTGCG...TTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR TCA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGAACATGTTCTTCATGTaGCACAGCTGGACCCGCAGC +
Preference number: 4 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKNMFFM*HSWTRS
Trigger: GCTGCGGGTCCAGCTGTGTCACATGAAGAACATGTT...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp AGAAGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAAACATGTTCTTCATGTaGCACAGCTGGACCCGCAGC +
Preference number: 4 (lower is better)
Translates to: RRPQTLEELGLAVSSTDRNMFFM*HSWTRS
Trigger: GCTGCGGGTCCAGCTGTGTCACATGAAGAACATGTT...TCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp ATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTCCAGTTCCTCTCCCAGCCAGTCGGCAAGTCTTaGACATGTTCTTCATGTGAC +
Preference number: 4 (lower is better)
Translates to: IWLLSRLRNSSPFQFLSQPVGKS*TCSSCD
Trigger: GTCACATGAAGAACATGTTCAAGACTTGCCGACTGG...CTGGGAGAGGAACTGGAAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR TCA 90 bp AGAAGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAAGTCAGGTCATTCAGTaGGTACAGGTGGAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: RRPQTLEELGLAVSSTDRSQVIQ*VQVEVL
Trigger: GAGGACCTCCACCTGTACTCACTGAATGACCTGACT...TCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCTTCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp TTCACAGCTGCCTCTGAGGTCTCTGAGGAGTCTAGGATAGTCAGGATTGTTCTGCTCCTCCTCGTAGTCTaGCAGGTAAGACTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: FTAASEVSEESRIVRIVLLLLVV*QVRLQA
Trigger: AGCCTGGAGTCTTACCTGTCAGACTACGAGGAGGAG...CAGAACAATCCTGACTATCCTAGACTCCTCAGAGACCTCAGAGGCAGCTGTGAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp TCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATTCACAGCTGCCTCCAACCTGCCGACGGCTaGCTGCACACAGACGTCAGA +
Preference number: 4 (lower is better)
Translates to: SNISNRNSRQHRDIHSCLQPADG*LHTDVR
Trigger: TCTGACGTCTGTGTGCAGTCAGCCGTCGGCAGGTTG...GAGGCAGCTGTGAATGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp TTCAAAGAGTGGCTCAGTTCTGCAACAGGTGTGACCCGGCCCGGAGGGAGGGCTCAGAAGCTCCAGAACTaGAACAAAGGAAAATTGGAA +
Preference number: 4 (lower is better)
Translates to: FKEWLSSATGVTRPGGRAQKLQN*NKGKLE
Trigger: TTCCAATTTTCCTTTGTTTCAGTTCTGGAGCTTCTG...AGCCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCTTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp TTCAAAGAGTGGCTCAGTTCTGCAACAGGTGTGACCCGGCCCGGAGGGAGGGCTAGCATTGTCATCCTTTaGTCCTATGCTGATGTGAAA +
Preference number: 4 (lower is better)
Translates to: FKEWLSSATGVTRPGGRASIVIL*SYADVK
Trigger: TTTCACATCAGCATAGGATCAAAGGATGACAATGCT...AGCCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCTTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp CAAGACGGCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGTCTTCTGCTATGTCTTaGATCTTGTCTCCACCTGGT +
Preference number: 4 (lower is better)
Translates to: QDGTSVLQRSDLEKELDVSSAMS*ILSPPG
Trigger: ACCAGGTGGAGACAAGATTCAAGACATAGCAGAAGA...CACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGCCGTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp CTAAGAGGGGAGGTAGAGGTGGTCACAATCCCGCCCCTCATGCCACAGTGTGCTATGATCAAGAACACCTaGATTTGTGTGCTAGTGGCA +
Preference number: 4 (lower is better)
Translates to: LRGEVEVVTIPPLMPQCAMIKNT*ICVLVA
Trigger: TGCCACTAGCACACAAATTCAGGTGTTCTTGATCAT...AGCACACTGTGGCATGAGGGGCGGGATTGTGACCACCTCTACCTCCCCTCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR TCA 90 bp GATGACTGCTGGACAAACACAACAGGAGCAGTTGCAGACAAAGTAGCTGAGGGACTGGTCTTGAATTCCTaGCCTCAGGTGATCCCCCTG +
Preference number: 4 (lower is better)
Translates to: DDCWTNTTGAVADKVAEGLVLNS*PQVIPL
Trigger: CAGGGGGATCACCTGAGGTCAGGAATTCAAGACCAG...TCCCTCAGCTACTTTGTCTGCAACTGCTCCTGTTGTGTTTGTCCAGCAGTCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR TCA 90 bp ATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTCCAGTTCCTCTCCCAGAGGCTGTGTTCCTTCTaGTGTCAGCATCTGAGAACA +
Preference number: 4 (lower is better)
Translates to: IWLLSRLRNSSPFQFLSQRLCSF*CQHLRT
Trigger: TGTTCTCAGATGCTGACATCAGAAGGAACACAGCCT...CTGGGAGAGGAACTGGAAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR TCA 90 bp ATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTCCAGTTCCTCTCCCAGTTCTTTAGATCAGGATaGTTTGGCTGCTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: IWLLSRLRNSSPFQFLSQFFRSG*FGCSPG
Trigger: GCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAA...CTGGGAGAGGAACTGGAAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR GCA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGGCCCGTGATAGAGGATaGTCTGCATGTCCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKARDRG*SACPCK
Trigger: TTTGCAGGGACATGCAGAGCATCCTCTATCACGGGC...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTTGGTACTGCAGGCTGTaGTGCAGCCACAGCTCGGCA +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTWYCRL*CSHSSA
Trigger: TGCCGAGCTGTGGCTGCAGCACAGCCTGCAGTACCA...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR GCA 90 bp AAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTGACTGCGTTGTTCTGTTCCACTaGTTCCAGGCACTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: KLSVTTDSGPINLPTADCVVLFH*FQALQH
Trigger: ATGCTGCAGTGCCTGGAAGCAGTGGAACAGAACAAC...GCAGTCAGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp AAGGGGAGAGAACGGAGTCGGGTTGTACTTTTACTCAGAAGCACAACGACCATCAGGAGCGGGCTCTCGTaGTTTCTGGCAAACATGGAC +
Preference number: 4 (lower is better)
Translates to: KGRERSRVVLLLRSTTTIRSGLS*FLANMD
Trigger: GTCCATGTTTGCCAGAAAGCACGAGAGCCCGCTCCT...GATGGTCGTTGTGCTTCTGAGTAAAAGTACAACCCGACTCCGTTCTCTCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTGCTGCTGACCCAGGATaGCTCTATGGGGCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTAADPG*LYGAGQ
Trigger: CTGACCAGCCCCATAGAGGCATCCTGGGTCAGCAGC...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR GCA 90 bp TCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTCTCGGGGGTCCAAGTTaGCAATGGCCAGGTACTCAG +
Preference number: 4 (lower is better)
Translates to: SLDQDDLAALQAKEQQPFLGGPS*QWPGTQ
Trigger: CTGAGTACCTGGCCATTGGCAACTTGGACCCCCGAG...AAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR GCA 90 bp TTCACAGCTGCCTCTGAGGTCTCTGAGGAGTCTAGGATAGTCAGGATTGTTCTGTGCTCTCGGCATTGCTaGTGTGACTCTGACAGCTGG +
Preference number: 4 (lower is better)
Translates to: FTAASEVSEESRIVRIVLCSRHC*CDSDSW
Trigger: CCAGCTGTCAGAGTCACAGCAGCAATGCCGAGAGCA...CAGAACAATCCTGACTATCCTAGACTCCTCAGAGACCTCAGAGGCAGCTGTGAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp GCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGTCACCTTACAAATTGGAACTGCTaGTCTCGGCATTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: AHLSSSAVTWRKSWMCHLTNWNC*SRHCCC
Trigger: ACAGCAGCAATGCCGAGAGCAGCAGTTCCAATTTGT...AAGGTGACACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp TTCACAGCTGCCTCTGAGGTCTCTGAGGAGTCTAGGATAGTCAGGATTGTTCTGGTGACAGTGAGTGTCTaGCCCTCTGAGAAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: FTAASEVSEESRIVRIVLVTVSV*PSEKLD
Trigger: GTCCAGCTTCTCAGAGGGGCAGACACTCACTGTCAC...CAGAACAATCCTGACTATCCTAGACTCCTCAGAGACCTCAGAGGCAGCTGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp GTTTACAAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTGTGACAGTGAGTGTCTaGCCCTCTGAGAAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: VYKLSVTTDSGPINLPTAVTVSV*PSEKLD
Trigger: GTCCAGCTTCTCAGAGGGGCAGACACTCACTGTCAC...AGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTTGTAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp TCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTCTCCCCTGGAGGCAATaGTGGTATCCGAATGGGAGC +
Preference number: 4 (lower is better)
Translates to: SLDQDDLAALQAKEQQPFLPWRQ*WYPNGS
Trigger: GCTCCCATTCGGATACCAGCATTGCCTCCAGGGGAG...AAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR GCA 90 bp CCCCTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGATGGTCTTCGGAACATaGCTTCCCCTGAGCACAGGT +
Preference number: 4 (lower is better)
Translates to: PLTRGSLDQDDLAALQAKMVFGT*LPLSTG
Trigger: ACCTGTGCTCAGGGGAAGGCATGTTCCGAAGACCAT...CTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR GCA 90 bp CAGCAGCAGGAGAGGTGGTTGAGAAAGGCCTGGCTCAGAAGCTCCAGAACTGAAAGGAAACGAAGGATTTaGTGCTTGAGGCTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: QQQERWLRKAWLRSSRTERKRRI*CLRLCS
Trigger: GGAACACAGCCTCAAGCAGCAAATCCTTCGTTTCCT...TTCAGTTCTGGAGCTTCTGAGCCAGGCCTTTCTCAACCACCTCTCCTGCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp GTTTACAAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTTCAGCAGACGTGGAGTaGAGGAAGCAGTGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: VYKLSVTTDSGPINLPTASADVE*RKQWEK
Trigger: CTTCTCCCACTGCTTCCTGCACTCCACGTCTGCTGA...AGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTTGTAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp CCCCTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGCCGGATGCCACATCCTaGACAGCGGTAATTCTGCTT +
Preference number: 4 (lower is better)
Translates to: PLTRGSLDQDDLAALQAKPDATS*TAVILL
Trigger: AAGCAGAATTACCGCTGTGCAGGATGTGGCATCCGG...CTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR GCA 90 bp TCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATTCACAGCTGCCTCCAGGGTCAGTCCGGATaGCACATCCTGCACAGCGGT +
Preference number: 4 (lower is better)
Translates to: SNISNRNSRQHRDIHSCLQGQSG*HILHSG
Trigger: ACCGCTGTGCAGGATGTGGCATCCGGACTGACCCTG...GAGGCAGCTGTGAATGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp GAGCCTGGCCTGAGCATCAGTTCTGTTCTTTGCTTCAAGATCACCAAGGTAGATAGAGTGGCTCAGTTCTaGAACAGGTGTGACCCGGCC +
Preference number: 4 (lower is better)
Translates to: EPGLSISSVLCFKITKVDRVAQF*NRCDPA
Trigger: GGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCT...ATCTACCTTGGTGATCTTGAAGCAAAGAACAGAACTGATGCTCAGGCCAGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp TCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATTCACAGCTGCCTCCTGGACCCATCAACCTaGCGACGGCTGACTGCACAC +
Preference number: 4 (lower is better)
Translates to: SNISNRNSRQHRDIHSCLLDPST*RRLTAH
Trigger: GTGTGCAGTCAGCCGTCGGCAGGTTGATGGGTCCAG...GAGGCAGCTGTGAATGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp GAGCCTGGCCTGAGCATCAGTTCTGTTCTTTGCTTCAAGATCACCAAGGTAGATCGCCTCACGTATGCTTaGGGCGTAAGGCTACAGGTG +
Preference number: 4 (lower is better)
Translates to: EPGLSISSVLCFKITKVDRLTYA*GVRLQV
Trigger: CACCTGTAGCCTTACGCCGCAAGCATACGTGAGGCG...ATCTACCTTGGTGATCTTGAAGCAAAGAACAGAACTGATGCTCAGGCCAGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp CAAGACGGCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGAGGAATTCTCTTCAGTaGATTCAAAGCTTCTCCCCG +
Preference number: 4 (lower is better)
Translates to: QDGTSVLQRSDLEKELDVRNSLQ*IQSFSP
Trigger: CGGGGAGAAGCTTTGAATGCACTGAAGAGAATTCCT...CACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGCCGTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp GCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGTCACCTTGTGATGAGCTCAGTGTaGCACTTACAGAGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: AHLSSSAVTWRKSWMCHLVMSSV*HLQRKL
Trigger: CAACTTCCTCTGTAAGTGGCACACTGAGCTCATCAC...AAGGTGACACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTCCCAGCAACTGCCAGTaGTCCCTCCTGCTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTPSNCQ*SLLLSS
Trigger: TGAGGAGAGCAGGAGGGAGCACTGGCAGTTGCTGGG...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR GCA 90 bp CAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGACTCGCACTCCTTTTATCATCCAGGATGGAGTaGAATGGAGCAAGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: QSTGGTHGTSLLRLALLLSSRME*NGASLA
Trigger: AGCCAAGCTTGCTCCATTGCACTCCATCCTGGATGA...TAAAAGGAGTGCGAGTCTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR GCA 90 bp AGGTGGAAACGCAGTTCAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGTTCAGTCATCGTATCTaGTTAGTCTCCTCTCGTCCG +
Preference number: 4 (lower is better)
Translates to: RWKRSSEHGRHTRNISTKFSHRI*LVSSRP
Trigger: CGGACGAGAGGAGACTAAGCAGATACGATGACTGAA...CTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTGAACTGCGTTTCCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR GCA 90 bp TCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTTCGCTCAGGCTGGAGTaGAGTGGCATGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: SLDQDDLAALQAKEQQPFSLRLE*SGMISA
Trigger: AGCCGAGATCATGCCACTGCACTCCAGCCTGAGCGA...AAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTTGGGCTGAGAGGCAGTaGTACTGCAGGCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTWAERQ*YCRLCC
Trigger: GCAGCACAGCCTGCAGTACCACTGCCTCTCAGCCCA...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR CCA 90 bp ACGAAAGCTCTAAATCCTTGGCAGAGAACGTCAAAAACAGCCTCATTTAAGTGGAGCAGGGGCCGGAGCTaGGCTGAGAGGCAGTGGTAC +
Preference number: 4 (lower is better)
Translates to: TKALNPWQRTSKTASFKWSRGRS*AERQWY
Trigger: GTACCACTGCCTCTCAGCCCAGCTCCGGCCCCTGCT...CCACTTAAATGAGGCTGTTTTTGACGTTCTCTGCCAAGGATTTAGAGCTTTCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGGGCTCTCGTGCTTTCTaGCAAACATGGACGCATCGA +
Preference number: 4 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKGSRAF*QTWTHR
Trigger: TCGATGCGTCCATGTTTGCCAGAAAGCACGAGAGCC...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp GTTTACAAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTTTGGAGGGGTGTATGTaGAACTGGGCAGGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: VYKLSVTTDSGPINLPTALEGCM*NWAGLS
Trigger: TGACAGCCCTGCCCAGTTCCACATACACCCCTCCAA...AGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTTGTAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp AGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGGCCTGAGCATAGCTGTTTaGAGGGGTGTATGTGGAACT +
Preference number: 4 (lower is better)
Translates to: RPQTLEELGLAVSSTDRGLSIAV*RGVCGT
Trigger: AGTTCCACATACACCCCTCCAAACAGCTATGCTCAG...GCCTCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp TTCACAGCTGCCTCTGAGGTCTCTGAGGAGTCTAGGATAGTCAGGATTGTTCTGTCTCTGAGCCATTGTTaGGCACGGATTGGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: FTAASEVSEESRIVRIVLSLSHC*ARIGGG
Trigger: GCCTCCACCAATCCGTGCCCAACAATGGCTCAGAGA...CAGAACAATCCTGACTATCCTAGACTCCTCAGAGACCTCAGAGGCAGCTGTGAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp AGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGGCGGAGCTCATTTCATTTaGGGTCAAAGGGGAATCCCT +
Preference number: 4 (lower is better)
Translates to: RPQTLEELGLAVSSTDRGGAHFI*GQRGIP
Trigger: AGGGATTCCCCTTTGACCCCAAATGAAATGAGCTCC...GCCTCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp GTTTACAAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTACTCAGGCCCCTCACTaGCATCACCTGGGGAATCAT +
Preference number: 4 (lower is better)
Translates to: VYKLSVTTDSGPINLPTATQAPH*HHLGNH
Trigger: ATGATTCCCCAGGTGATGCCAGTGAGGGGCCTGAGT...AGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTTGTAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp TGTGGCCCCCAAAATACCCAAATAAGTGGACGAAATGCCCATGACGTAGTCCTAGGTCCAAGTTGCCAATaGCCAGGTACTCAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: CGPQNTQISGRNAHDVVLGPSCQ*PGTQAP
Trigger: AGGGGCCTGAGTACCTGGCCATTGGCAACTTGGACC...TAGGACTACGTCATGGGCATTTCGTCCACTTATTTGGGTATTTTGGGGGCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp CACCTCATTTTAAGTGACAGTTACACCATGCACCAGAAACCCAGAGAAGTGAAGTGTGACTCTGACAGCTaGCAGTCCGGCCTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: HLILSDSYTMHQKPREVKCDSDS*QSGLGG
Trigger: ACCCCCGAGGCCGGACTGCCAGCTGTCAGAGTCACA...CTTCACTTCTCTGGGTTTCTGGTGCATGGTGTAACTGTCACTTAAAATGAGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp GCATCCTCTATGCTTCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATGTGACTCTGACAGCTaGCAGTCCGGCCTCGGGGGT +
Preference number: 4 (lower is better)
Translates to: ASSMLQIFQTGTPGNIGTCDSDS*QSGLGG
Trigger: ACCCCCGAGGCCGGACTGCCAGCTGTCAGAGTCACA...TGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGAAGCATAGAGGATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp CACCCTCAATGGGAGAAGGAATTAAACTCCACCTCCTGGGAGAATTTACGTATTACCTGCGGAGGACACTaGACAGCTGGCTCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: HPQWEKELNSTSWENLRITCGGH*TAGSPH
Trigger: GTGGGGAGAGCCAGCTGTCCAGTGTCCTCCGCAGGT...AATACGTAAATTCTCCCAGGAGGTGGAGTTTAATTCCTTCTCCCATTGAGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CCA 90 bp AGGTGGAAACGCAGTTCAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGATGCTGGTATCCGAATaGGAGCGAATGTGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: RWKRSSEHGRHTRNISTKMLVSE*ERMWLF
Trigger: GAAAAGCCACATTCGCTCCCATTCGGATACCAGCAT...CTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTGAACTGCGTTTCCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp CTAAGAGGGGAGGTAGAGGTGGTCACAATCCCGCCCCTCATGCCACAGTGTGCTACTTCATTAGCTCGATaGCAGCAATTAAGGACTCTG +
Preference number: 4 (lower is better)
Translates to: LRGEVEVVTIPPLMPQCATSLAR*QQLRTL
Trigger: CAGAGTCCTTAATTGCTGCCATCGAGCTAATGAAGT...AGCACACTGTGGCATGAGGGGCGGGATTGTGACCACCTCTACCTCCCCTCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CCA 90 bp TCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATTCACAGCTGCCTCTGGGGAGCAGGTTCTTaGTGCGGATTTGCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: SNISNRNSRQHRDIHSCLWGAGS*CGFAGA
Trigger: GGCGCCAGCAAATCCGCACCAAGAACCTGCTCCCCA...GAGGCAGCTGTGAATGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp GCCACCGTGCCTGGCCAACACTTCTTGAGTGAAAGTCTACTCGGTCTTGCCCGGGGCAATTTTCCTCGTTaGGGCTGGATGAACATTAAA +
Preference number: 4 (lower is better)
Translates to: ATVPGQHFLSESLLGLARGNFPR*GWMNIK
Trigger: TTTAATGTTCATCCAGCCCCAACGAGGAAAATTGCC...CCGGGCAAGACCGAGTAGACTTTCACTCAAGAAGTGTTGGCCAGGCACGGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp ATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTCCAGTTCATCTGGGCATTCTCGTaGCAGCACTGGCAGAAGTAC +
Preference number: 4 (lower is better)
Translates to: IRMIWLLSRLRNSSPFQFIWAFS*QHWQKY
Trigger: GTACTTCTGCCAGTGCTGCCACGAGAATGCCCAGAT...GAACTGGAAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp GATGACTGCTGGACAAACACAACAGGAGCAGTTGCAGACAAAGTAGCTGAGGGAAGGTCCTCTGTCAGGTaGCCTGGGACTGTGTCAAAG +
Preference number: 4 (lower is better)
Translates to: DDCWTNTTGAVADKVAEGRSSVR*PGTVSK
Trigger: CTTTGACACAGTCCCAGGCCACCTGACAGAGGACCT...TCCCTCAGCTACTTTGTCTGCAACTGCTCCTGTTGTGTTTGTCCAGCAGTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CCA 90 bp GAGCCTGGCCTGAGCATCAGTTCTGTTCTTTGCTTCAAGATCACCAAGGTAGATATGCATCTCTCCACATaGGTAGCCCCTGCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: EPGLSISSVLCFKITKVDMHLST*VAPALV
Trigger: CACCAGGGCAGGGGCTACCCATGTGGAGAGATGCAT...ATCTACCTTGGTGATCTTGAAGCAAAGAACAGAACTGATGCTCAGGCCAGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp GGAGTAGGAATGAGACGATGCGTGATGAGCTCAGTGTGCCACTTACAGAGGAAGAAAAGAAGCCCCAGGTaGGGCGAGTCCTTCAAAGAG +
Preference number: 4 (lower is better)
Translates to: GVGMRRCVMSSVCHLQRKKRSPR*GESFKE
Trigger: CTCTTTGAAGGACTCGCCCCACCTGGGGCTTCTTTT...CTTCCTCTGTAAGTGGCACACTGAGCTCATCACGCATCGTCTCATTCCTACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGAAAAGAAGCCCCAGGTaGGGCGAGTCCTTCAAAGAG +
Preference number: 4 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKKRSPR*GESFKE
Trigger: CTCTTTGAAGGACTCGCCCCACCTGGGGCTTCTTTT...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp TTCAAAGAGTGGCTCAGTTCTGCAACAGGTGTGACCCGGCCCGGAGGGAGGGCTAAGAAAGTCAGCTTGTaGCATCCTCTATGCTTCAAA +
Preference number: 4 (lower is better)
Translates to: FKEWLSSATGVTRPGGRAKKVSL*HPLCFK
Trigger: TTTGAAGCATAGAGGATGCCACAAGCTGACTTTCTT...AGCCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCTTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp TGTGGCCCCCAAAATACCCAAATAAGTGGACGAAATGCCCATGACGTAGTCCTACCTCTCCCACTTCCCTaGGAGACTCCTTCTTACCGC +
Preference number: 4 (lower is better)
Translates to: CGPQNTQISGRNAHDVVLPLPLP*ETPSYR
Trigger: GCGGTAAGAAGGAGTCTCCCAGGGAAGTGGGAGAGG...TAGGACTACGTCATGGGCATTTCGTCCACTTATTTGGGTATTTTGGGGGCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGTCGCTCGAGGTCTCATaGCAAGTTAGAGACACAGCC +
Preference number: 4 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKSLEVS*QVRDTA
Trigger: GGCTGTGTCTCTAACTTGCCATGAGACCTCGAGCGA...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp AGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGGCAGCTGCTCACAGAAGTaGGAACTGAAGCATCTAAGG +
Preference number: 4 (lower is better)
Translates to: RPQTLEELGLAVSSTDRGSCSQK*ELKHLR
Trigger: CCTTAGATGCTTCAGTTCCCACTTCTGTGAGCAGCT...GCCTCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp AGAAGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGATTTGAGAGTGCCGATTaGGAGAAGGTACAGACACGG +
Preference number: 4 (lower is better)
Translates to: RRPQTLEELGLAVSSTDRFESAD*EKVQTR
Trigger: CCGTGTCTGTACCTTCTCTCAATCGGCACTCTCAAA...TCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273582.9
CDS-3UTR TCA 90 bp GCATCCTCTATGCTTCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACAGGGCTGAGTGGGGACTaGGCCACCGGATGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: ASSMLQIFQTGTPGNIGTGLSGD*ATGCLS
Trigger: TGAAAGACATCCGGTGGCTCAGTCCCCACTCAGCCC...TGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGAAGCATAGAGGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp AGAAGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAAGTAGATCTTCTCTCTaGGCCATTGTTGGGCACGGA +
Preference number: 4 (lower is better)
Translates to: RRPQTLEELGLAVSSTDRSRSSL*AIVGHG
Trigger: TCCGTGCCCAACAATGGCTCAGAGAGAAGATCTACT...TCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTGGGGCTTGGATGGTTTaGTCCTCTGCTGGTGAGACG +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTGAWMV*SSAGET
Trigger: CGTCTCACCAGCAGAGGATCAAACCATCCAAGCCCC...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR TCA 90 bp CTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAAGAGGGACTGTCCTTCTaGTGGTCTTCGGAACATGCC +
Preference number: 4 (lower is better)
Translates to: LTRGSLDQDDLAALQAKEEGLSF*WSSEHA
Trigger: GGCATGTTCCGAAGACCATCAGAAGGACAGTCCCTC...TTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR TCA 90 bp GTTTACAAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTAGTCAGGTCATTCAGTaGGTACAGGTGGAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: VYKLSVTTDSGPINLPTASQVIQ*VQVEVL
Trigger: GAGGACCTCCACCTGTACTCACTGAATGACCTGACT...AGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTTGTAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp TTCACAGCTGCCTCTGAGGTCTCTGAGGAGTCTAGGATAGTCAGGATTGTTCTGCAGGTGAGCCTGGCCTaGGCATCAGTTCTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: FTAASEVSEESRIVRIVLQVSLA*ASVLFF
Trigger: AAAGAACAGAACTGATGCTCAGGCCAGGCTCACCTG...CAGAACAATCCTGACTATCCTAGACTCCTCAGAGACCTCAGAGGCAGCTGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp AGAAGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAACACATGCCATTTCTTaGCAGTCAAGGCAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: RRPQTLEELGLAVSSTDRTHAIS*QSRQAD
Trigger: GTCAGCCTGCCTTGACTGTCAAGAAATGGCATGTGT...TCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp GAAGTGGTTCGCTCGAGGTCTCATGGCAAGTTAGAGACACAGCCACTCCACCTCAGCTTTGGCTTCCTGTaGACTACACCAGTTTGTAAC +
Preference number: 4 (lower is better)
Translates to: EVVRSRSHGKLETQPLHLSFGFL*TTPVCN
Trigger: GTTACAAACTGGTGTAGTTCACAGGAAGCCAAAGCT...GAGGTGGAGTGGCTGTGTCTCTAACTTGCCATGAGACCTCGAGCGAACCACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR GCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTTGCTCTGCATGTCCCTaGAAAGCCGCTCCAAGCCAC +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTCSACP*KAAPSH
Trigger: GTGGCTTGGAGCGGCTTTGCAGGGACATGCAGAGCA...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR GCA 90 bp GTTTACAAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTCTCTGGTCGTTCTCGTaGACGCTGATGAACTTCTCC +
Preference number: 4 (lower is better)
Translates to: VYKLSVTTDSGPINLPTALWSFS*TLMNFS
Trigger: GGAGAAGTTCATCAGCGTGCACGAGAACGACCAGAG...AGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTTGTAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp GCATCCTCTATGCTTCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACAGCTGCTGACCCAGGATaGCTCTATGGGGCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: ASSMLQIFQTGTPGNIGTAADPG*LYGAGQ
Trigger: CTGACCAGCCCCATAGAGGCATCCTGGGTCAGCAGC...TGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGAAGCATAGAGGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTCTCGGGGGTCCAAGTTaGCAATGGCCAGGTACTCAG +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTLGGPS*QWPGTQ
Trigger: CTGAGTACCTGGCCATTGGCAACTTGGACCCCCGAG...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR GCA 90 bp CTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAATGCTCTCGGCATTGCTaGTGTGACTCTGACAGCTGG +
Preference number: 4 (lower is better)
Translates to: LTRGSLDQDDLAALQAKECSRHC*CDSDSW
Trigger: CCAGCTGTCAGAGTCACAGCAGCAATGCCGAGAGCA...TTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR GCA 90 bp GTTTACAAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTCTGGCTTCTGGGAGCTaGTGGAGGAGAACAAATTGG +
Preference number: 4 (lower is better)
Translates to: VYKLSVTTDSGPINLPTALASGS*WRRTNW
Trigger: CCAATTTGTTCTCCTCCAGCAGCTCCCAGAAGCCAG...AGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTTGTAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTCTGAGAAGCTGGACCTaGGGAGGACACTGGACAGCT +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTLRSWT*GGHWTA
Trigger: AGCTGTCCAGTGTCCTCCGCAGGTCCAGCTTCTCAG...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR GCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTCTCCCCTGGAGGCAATaGTGGTATCCGAATGGGAGC +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTLPWRQ*WYPNGS
Trigger: GCTCCCATTCGGATACCAGCATTGCCTCCAGGGGAG...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR GCA 90 bp GTTTACAAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTATGGTCTTCGGAACATaGCTTCCCCTGAGCACAGGT +
Preference number: 4 (lower is better)
Translates to: VYKLSVTTDSGPINLPTAMVFGT*LPLSTG
Trigger: ACCTGTGCTCAGGGGAAGGCATGTTCCGAAGACCAT...AGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTTGTAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp AGGTGGAAACGCAGTTCAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGACTGGCTCATCATGTTaGACTTCATTAGCTCGATGG +
Preference number: 4 (lower is better)
Translates to: RWKRSSEHGRHTRNISTKTGSSC*TSLARW
Trigger: CCATCGAGCTAATGAAGTGCAACATGATGAGCCAGT...CTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTGAACTGCGTTTCCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp TTCACAGCTGCCTCTGAGGTCTCTGAGGAGTCTAGGATAGTCAGGATTGTTCTGCGAAGGCGGATCTTCTaGTTCAGCTCCTGGATCTCT +
Preference number: 4 (lower is better)
Translates to: FTAASEVSEESRIVRIVLRRRIF*FSSWIS
Trigger: AGAGATCCAGGAGCTGAAGCAGAAGATCCGCCTTCG...CAGAACAATCCTGACTATCCTAGACTCCTCAGAGACCTCAGAGGCAGCTGTGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp TCTTTGTACTCTCAGCTCTGGCATGGTGTCTGGAACACGGAGGCATCTATAGATACCCGAAAGCTTCCGTaGTCAGCCTCCTGGTACATG +
Preference number: 4 (lower is better)
Translates to: SLYSQLWHGVWNTEASIDTRKLP*SASWYM
Trigger: CATGTACCAGGAGGCTGAGCACGGAAGCTTTCGGGT...ATCTATAGATGCCTCCGTGTTCCAGACACCATGCCAGAGCTGAGAGTACAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR GCA 90 bp CAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGACTCGCACTCCTTTTAAGGAAACGAAGGATTTaGTGCTTGAGGCTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: QSTGGTHGTSLLRLALLLRKRRI*CLRLCS
Trigger: GGAACACAGCCTCAAGCAGCAAATCCTTCGTTTCCT...TAAAAGGAGTGCGAGTCTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp TTCACAGCTGCCTCTGAGGTCTCTGAGGAGTCTAGGATAGTCAGGATTGTTCTGCCGGATGCCACATCCTaGACAGCGGTAATTCTGCTT +
Preference number: 4 (lower is better)
Translates to: FTAASEVSEESRIVRIVLPDATS*TAVILL
Trigger: AAGCAGAATTACCGCTGTGCAGGATGTGGCATCCGG...CAGAACAATCCTGACTATCCTAGACTCCTCAGAGACCTCAGAGGCAGCTGTGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp AGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGGCGCACTGTTTATGTCCTaGACGTTGAAGAGAGGATCA +
Preference number: 4 (lower is better)
Translates to: RPQTLEELGLAVSSTDRGALFMS*TLKRGS
Trigger: TGATCCTCTCTTCAACGTGCAGGACATAAACAGTGC...GCCTCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp TCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATTCACAGCTGCCTCCGCCTCACGTATGCTTaGGGCGTAAGGCTACAGGTG +
Preference number: 4 (lower is better)
Translates to: SNISNRNSRQHRDIHSCLRLTYA*GVRLQV
Trigger: CACCTGTAGCCTTACGCCGCAAGCATACGTGAGGCG...GAGGCAGCTGTGAATGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp TTCACAGCTGCCTCTGAGGTCTCTGAGGAGTCTAGGATAGTCAGGATTGTTCTGAATGAACTGCCAGGCTaGACAAGCACCACAGCAGGT +
Preference number: 4 (lower is better)
Translates to: FTAASEVSEESRIVRIVLNELPG*TSTTAG
Trigger: ACCTGCTGTGGTGCTTGTGCAGCCTGGCAGTTCATT...CAGAACAATCCTGACTATCCTAGACTCCTCAGAGACCTCAGAGGCAGCTGTGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGACTTCGCCTTATCATTaGAGGATTCTGGAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKTSPYH*RILELP
Trigger: GGGGAGCTCCAGAATCCTGCAATGATAAGGCGAAGT...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CCA 90 bp AGAAGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAAGACGTTGGGGCTGTTaGTTGATACCAAACCCTCCA +
Preference number: 4 (lower is better)
Translates to: RRPQTLEELGLAVSSTDRRRWGC*LIPNPP
Trigger: TGGAGGGTTTGGTATCAACCAACAGCCCCAACGTCT...TCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTCCATCAGCACTGCTCTaGTCGTTCTCGTGCACGCTG +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTPSALL*SFSCTL
Trigger: CAGCGTGCACGAGAACGACCAGAGCAGTGCTGATGG...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR CCA 90 bp GATGACTGCTGGACAAACACAACAGGAGCAGTTGCAGACAAAGTAGCTGAGGGAGGCTCTCGTGCTTTCTaGCAAACATGGACGCATCGA +
Preference number: 4 (lower is better)
Translates to: DDCWTNTTGAVADKVAEGGSRAF*QTWTHR
Trigger: TCGATGCGTCCATGTTTGCCAGAAAGCACGAGAGCC...TCCCTCAGCTACTTTGTCTGCAACTGCTCCTGTTGTGTTTGTCCAGCAGTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTAGGGCTGTCAGGCTCTaGCTCTTTGTCACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTRAVRL*LFVTRS
Trigger: GCTCCTGGTGACAAAGAGCCAGAGCCTGACAGCCCT...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR CCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTGGGTGTATGTGGAACTaGGCAGGGCTGTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTGCMWN*AGLSGS
Trigger: AGAGCCTGACAGCCCTGCCCAGTTCCACATACACCC...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR CCA 90 bp GAGCCTGGCCTGAGCATCAGTTCTGTTCTTTGCTTCAAGATCACCAAGGTAGATTCTCTGAGCCATTGTTaGGCACGGATTGGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: EPGLSISSVLCFKITKVDSLSHC*ARIGGG
Trigger: GCCTCCACCAATCCGTGCCCAACAATGGCTCAGAGA...ATCTACCTTGGTGATCTTGAAGCAAAGAACAGAACTGATGCTCAGGCCAGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp AGAAGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGGCTGGTCAGAGTACTaGAGCTCATTTCATTTGGGG +
Preference number: 4 (lower is better)
Translates to: RRPQTLEELGLAVSSTDRGWSEY*SSFHLG
Trigger: CCCCAAATGAAATGAGCTCCAGTACTCTGACCAGCC...TCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGGGCTGGTCAGAGTACTaGAGCTCATTTCATTTGGGG +
Preference number: 4 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKGWSEY*SSFHLG
Trigger: CCCCAAATGAAATGAGCTCCAGTACTCTGACCAGCC...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp CCCCTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGGCTGGTCAGAGTACTaGAGCTCATTTCATTTGGGG +
Preference number: 4 (lower is better)
Translates to: PLTRGSLDQDDLAALQAKGWSEY*SSFHLG
Trigger: CCCCAAATGAAATGAGCTCCAGTACTCTGACCAGCC...CTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTCCCAGGATGCCTCTATaGGGCTGGTCAGAGTACTGG +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTPRMPL*GWSEYW
Trigger: CCAGTACTCTGACCAGCCCCATAGAGGCATCCTGGG...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR CCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTCCTGGGGAATCATTCTaGCTGCTGACCCAGGATGCC +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTPGESF*LLTQDA
Trigger: GGCATCCTGGGTCAGCAGCCAGAATGATTCCCCAGG...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR CCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTGGTCCAAGTTGCCAATaGCCAGGTACTCAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTGPSCQ*PGTQAP
Trigger: AGGGGCCTGAGTACCTGGCCATTGGCAACTTGGACC...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR CCA 90 bp GGAGTAGGAATGAGACGATGCGTGATGAGCTCAGTGTGCCACTTACAGAGGAAGGCTTCTGGGAGCTGCTaGAGGAGAACAAATTGGAAC +
Preference number: 4 (lower is better)
Translates to: GVGMRRCVMSSVCHLQRKASGSC*RRTNWN
Trigger: GTTCCAATTTGTTCTCCTCCAGCAGCTCCCAGAAGC...CTTCCTCTGTAAGTGGCACACTGAGCTCATCACGCATCGTCTCATTCCTACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGGCTTCTGGGAGCTGCTaGAGGAGAACAAATTGGAAC +
Preference number: 4 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKASGSC*RRTNWN
Trigger: GTTCCAATTTGTTCTCCTCCAGCAGCTCCCAGAAGC...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp CCCCTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGCAGTGGGAGAAGGACTaGGAGGAAACGAAGGATTTG +
Preference number: 4 (lower is better)
Translates to: PLTRGSLDQDDLAALQAKQWEKD*EETKDL
Trigger: CAAATCCTTCGTTTCCTCCCAGTCCTTCTCCCACTG...CTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp AGAAGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAAGCGGTAATTCTGCTTaGCCACGGCAATTTTCCTCG +
Preference number: 4 (lower is better)
Translates to: RRPQTLEELGLAVSSTDRSGNSA*PRQFSS
Trigger: CGAGGAAAATTGCCGTGGCCAAGCAGAATTACCGCT...TCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp ATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTCCAGTTCAGCGGTAATTCTGCTTaGCCACGGCAATTTTCCTCG +
Preference number: 4 (lower is better)
Translates to: IRMIWLLSRLRNSSPFQFSGNSA*PRQFSS
Trigger: CGAGGAAAATTGCCGTGGCCAAGCAGAATTACCGCT...GAACTGGAAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp GCATCCTCTATGCTTCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACACTGGGGATGGCCATCTaGGCATTCTCGTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: ASSMLQIFQTGTPGNIGTLGMAI*AFSWQH
Trigger: GTGCTGCCACGAGAATGCCCAGATGGCCATCCCCAG...TGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGAAGCATAGAGGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp AGAATTCAATCCCAGAACAAAAATGATGCAGGCTTTAGTTCACAGAGCTGCCAGTGCGCAGAACCCGGCTaGGGATGGCCATCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: RIQSQNKNDAGFSSQSCQCAEPG*GWPSGH
Trigger: ATGCCCAGATGGCCATCCCCAGCCGGGTTCTGCGCA...CTGGCAGCTCTGTGAACTAAAGCCTGCATCATTTTTGTTCTGGGATTGAATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp TCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTAGGTCCTCTGTCAGGTaGCCTGGGACTGTGTCAAAG +
Preference number: 4 (lower is better)
Translates to: SLDQDDLAALQAKEQQPFRSSVR*PGTVSK
Trigger: CTTTGACACAGTCCCAGGCCACCTGACAGAGGACCT...AAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp GATGACTGCTGGACAAACACAACAGGAGCAGTTGCAGACAAAGTAGCTGAGGGAAAAAGAAGCCCCAGGTaGGGCGAGTCCTTCAAAGAG +
Preference number: 4 (lower is better)
Translates to: DDCWTNTTGAVADKVAEGKRSPR*GESFKE
Trigger: CTCTTTGAAGGACTCGCCCCACCTGGGGCTTCTTTT...TCCCTCAGCTACTTTGTCTGCAACTGCTCCTGTTGTGTTTGTCCAGCAGTCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CCA 90 bp GAAGTGGTTCGCTCGAGGTCTCATGGCAAGTTAGAGACACAGCCACTCCACCTCGTCAGGATTGTTCTGTaGCCCCCAAAATACCCAAAT +
Preference number: 4 (lower is better)
Translates to: EVVRSRSHGKLETQPLHLVRIVL*PPKYPN
Trigger: ATTTGGGTATTTTGGGGGCCACAGAACAATCCTGAC...GAGGTGGAGTGGCTGTGTCTCTAACTTGCCATGAGACCTCGAGCGAACCACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp AGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGGCGTCAGGATTGTTCTGTaGCCCCCAAAATACCCAAAT +
Preference number: 4 (lower is better)
Translates to: RPQTLEELGLAVSSTDRGVRIVL*PPKYPN
Trigger: ATTTGGGTATTTTGGGGGCCACAGAACAATCCTGAC...GCCTCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp GGAGTAGGAATGAGACGATGCGTGATGAGCTCAGTGTGCCACTTACAGAGGAAGACGCTAAGAAGATGGTaGGTGAGGTTCCTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: GVGMRRCVMSSVCHLQRKTLRRW*VRFLSS
Trigger: TGAGGACAGGAACCTCACCCACCATCTTCTTAGCGT...CTTCCTCTGTAAGTGGCACACTGAGCTCATCACGCATCGTCTCATTCCTACTCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp AAGGGGAGAGAACGGAGTCGGGTTGTACTTTTACTCAGAAGCACAACGACCATCGACACGCTAAGAAGATaGTGGGTGAGGTTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: KGRERSRVVLLLRSTTTIDTLRR*WVRFLS
Trigger: GGACAGGAACCTCACCCACCATCTTCTTAGCGTGTC...GATGGTCGTTGTGCTTCTGAGTAAAAGTACAACCCGACTCCGTTCTCTCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp AGAAGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGATCACAAACACACACATaGCCCCACCCAAGGACTTCA +
Preference number: 4 (lower is better)
Translates to: RRPQTLEELGLAVSSTDRSQTHT*PHPRTS
Trigger: TGAAGTCCTTGGGTGGGGCCATGTGTGTGTTTGTGA...TCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp GATGACTGCTGGACAAACACAACAGGAGCAGTTGCAGACAAAGTAGCTGAGGGATCCTGGTTTAGTCCCTaGCAAGGAAAGAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: DDCWTNTTGAVADKVAEGSWFSP*QGKSWQ
Trigger: CTGCCAGCTCTTTCCTTGCCAGGGACTAAACCAGGA...TCCCTCAGCTACTTTGTCTGCAACTGCTCCTGTTGTGTTTGTCCAGCAGTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CCA 90 bp AAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTGACTGCCCAGTCCACCCTCAATaGGAGAAGGAATTAAACTCC +
Preference number: 4 (lower is better)
Translates to: KLSVTTDSGPINLPTADCPVHPQ*EKELNS
Trigger: GGAGTTTAATTCCTTCTCCCATTGAGGGTGGACTGG...GCAGTCAGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CCA 90 bp CCTCCCCTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTTCTCCCAGTGCTGACTaGCCATTTCAACTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: PPLTRGSLDQDDLAALQASPSAD*PFQLPQ
Trigger: TTGAGGAAGTTGAAATGGCCAGTCAGCACTGGGAGA...AGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAGGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTTACCTGGAGCTCCCCTaGAGGCAATGCTGGTATCCG +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTYLELP*RQCWYP
Trigger: CGGATACCAGCATTGCCTCCAGGGGAGCTCCAGGTA...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449205.1
3UTR CAA 72 bp AGCTCTGCTGCAGGAAGGGGAGAGAACGGAGTCGGGTaGTACTTTTACTCAGAAGCACAACGACCATCTAAC +
Preference number: 4 (lower is better)
Translates to: SSAAGRGENGVG*YFYSEAQRPSN
Trigger: GTTAGATGGTCGTTGTGCTTCTGAGTAAAAGTACAACCCGACTCCGTTCTCTCCCCTTCCTGCAGCAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp TTCACAGCTGCCTCTGAGGTCTCTGAGGAGTCTAGGATAGTCAGGATTGTTCTGCCGTGCCAGATGTTTTaGGAGTGCCGATTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: FTAASEVSEESRIVRIVLPCQMF*ECRLRE
Trigger: TTCTCTCAATCGGCACTCTCAAAACATCTGGCACGG...CAGAACAATCCTGACTATCCTAGACTCCTCAGAGACCTCAGAGGCAGCTGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273582.9
CDS-3UTR TCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTGTTGGGGCTGTTGGTTaGTACCAAACCCTCCACCGT +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTVGAVG*YQTLHR
Trigger: ACGGTGGAGGGTTTGGTATCAACCAACAGCCCCAAC...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR TCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTAGCATGGCCGTGACATaGGCGTCACTTAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTSMAVT*ASLSRK
Trigger: CTTCCTGCTAAGTGACGCTCATGTCACGGCCATGCT...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR TCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTACTGCAGCATGGCCGTaGCATGAGCGTCACTTAGCA +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTTAAWP*HERHLA
Trigger: TGCTAAGTGACGCTCATGTCACGGCCATGCTGCAGT...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR TCA 90 bp GAGCCTGGCCTGAGCATCAGTTCTGTTCTTTGCTTCAAGATCACCAAGGTAGATAATCATTCTGGCTGCTaGCCCAGGATGCCTCTATGG +
Preference number: 4 (lower is better)
Translates to: EPGLSISSVLCFKITKVDNHSGC*PRMPLW
Trigger: CCATAGAGGCATCCTGGGTCAGCAGCCAGAATGATT...ATCTACCTTGGTGATCTTGAAGCAAAGAACAGAACTGATGCTCAGGCCAGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp CTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAAAATCATTCTGGCTGCTaGCCCAGGATGCCTCTATGG +
Preference number: 4 (lower is better)
Translates to: LTRGSLDQDDLAALQAKENHSGC*PRMPLW
Trigger: CCATAGAGGCATCCTGGGTCAGCAGCCAGAATGATT...TTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR TCA 90 bp ACGAAAGCTCTAAATCCTTGGCAGAGAACGTCAAAAACAGCCTCATTTAAGTGGGAACATGCCTTCCCCTaGGCACAGGTACCGACCACC +
Preference number: 4 (lower is better)
Translates to: TKALNPWQRTSKTASFKWEHAFP*AQVPTT
Trigger: GGTGGTCGGTACCTGTGCTCAGGGGAAGGCATGTTC...CCACTTAAATGAGGCTGTTTTTGACGTTCTCTGCCAAGGATTTAGAGCTTTCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp GCATCCTCTATGCTTCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACACTGTGCCGAATCACGTaGGCTGAACTGGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: ASSMLQIFQTGTPGNIGTLCRIT*AELGAA
Trigger: AGCAGCTCCCAGTTCAGCTCACGTGATTCGGCACAG...TGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGAAGCATAGAGGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGGAAGGATTTGCTGCTTaGGGCTGTGTTCCTTCTGAT +
Preference number: 4 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKEGFAA*GCVPSD
Trigger: ATCAGAAGGAACACAGCCTCAAGCAGCAAATCCTTC...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp ATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTCCAGTTCGAAGGATTTGCTGCTTaGGGCTGTGTTCCTTCTGAT +
Preference number: 4 (lower is better)
Translates to: IRMIWLLSRLRNSSPFQFEGFAA*GCVPSD
Trigger: ATCAGAAGGAACACAGCCTCAAGCAGCAAATCCTTC...GAACTGGAAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR TCA 90 bp GAGCCTGGCCTGAGCATCAGTTCTGTTCTTTGCTTCAAGATCACCAAGGTAGATAGTACCGCAGTCGCTTaGTGTAATCAGGGTCAGTCC +
Preference number: 4 (lower is better)
Translates to: EPGLSISSVLCFKITKVDSTAVA*CNQGQS
Trigger: GGACTGACCCTGATTACATCAAGCGACTGCGGTACT...ATCTACCTTGGTGATCTTGAAGCAAAGAACAGAACTGATGCTCAGGCCAGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp GAGCCTGGCCTGAGCATCAGTTCTGTTCTTTGCTTCAAGATCACCAAGGTAGATAGTCAGGTCATTCAGTaGGTACAGGTGGAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: EPGLSISSVLCFKITKVDSQVIQ*VQVEVL
Trigger: GAGGACCTCCACCTGTACTCACTGAATGACCTGACT...ATCTACCTTGGTGATCTTGAAGCAAAGAACAGAACTGATGCTCAGGCCAGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp GCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGTCACCTTATGTCATCCTCATTCTaGCAGAACTCACAGATGAAG +
Preference number: 4 (lower is better)
Translates to: AHLSSSAVTWRKSWMCHLMSSSF*QNSQMK
Trigger: CTTCATCTGTGAGTTCTGTCAGAATGAGGATGACAT...AAGGTGACACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp AAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTGACTGCGCTCAAAGGGAAAGATaGTGTCATCCTCATTCTGAC +
Preference number: 4 (lower is better)
Translates to: KLSVTTDSGPINLPTADCAQRER*CHPHSD
Trigger: GTCAGAATGAGGATGACATCATCTTTCCCTTTGAGC...GCAGTCAGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp TCTTTGTACTCTCAGCTCTGGCATGGTGTCTGGAACACGGAGGCATCTATAGATCATCAGGGACCTGCCTaGGCTTCAAAGATCACACCT +
Preference number: 4 (lower is better)
Translates to: SLYSQLWHGVWNTEASIDHQGPA*ASKITP
Trigger: AGGTGTGATCTTTGAAGCTCAGGCAGGTCCCTGATG...ATCTATAGATGCCTCCGTGTTCCAGACACCATGCCAGAGCTGAGAGTACAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR TCA 90 bp AGGTGGAAACGCAGTTCAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGGCTTTTCTCCAACTTTaGCCAAAGAAGCTAAGGCAA +
Preference number: 4 (lower is better)
Translates to: RWKRSSEHGRHTRNISTKAFLQL*PKKLRQ
Trigger: TTGCCTTAGCTTCTTTGGTCAAAGTTGGAGAAAAGC...CTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTGAACTGCGTTTCCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp GATGACTGCTGGACAAACACAACAGGAGCAGTTGCAGACAAAGTAGCTGAGGGAATAAACTCCTGGGTCTaGATCTGGGACCTAACCCCT +
Preference number: 4 (lower is better)
Translates to: DDCWTNTTGAVADKVAEGINSWV*IWDLTP
Trigger: AGGGGTTAGGTCCCAGATTCAGACCCAGGAGTTTAT...TCCCTCAGCTACTTTGTCTGCAACTGCTCCTGTTGTGTTTGTCCAGCAGTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR TCA 90 bp CACCCTCAATGGGAGAAGGAATTAAACTCCACCTCCTGGGAGAATTTACGTATTTGTCCTCCAGCGCAGTaGCCTGGAGAAAGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: HPQWEKELNSTSWENLRICPPAQ*PGERAG
Trigger: TCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACA...AATACGTAAATTCTCCCAGGAGGTGGAGTTTAATTCCTTCTCCCATTGAGGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR TCA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGCCTTTGATCCTATGCTaGTGTGAAACAGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKPLILC*CETGRT
Trigger: TGTCCTGCCTGTTTCACATCAGCATAGGATCAAAGG...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp ATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTCCAGTTCCTCTCCCAGTTTGGTCATAATGACTaGGAACAACAAATGACGGCC +
Preference number: 4 (lower is better)
Translates to: IWLLSRLRNSSPFQFLSQFGHND*EQQMTA
Trigger: GGCCGTCATTTGTTGTTCTCAGTCATTATGACCAAA...CTGGGAGAGGAACTGGAAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR GCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTTGGCACCATCAGCACTaGTCTGGTCGTTCTCGTGCA +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTWHHQH*SGRSRA
Trigger: TGCACGAGAACGACCAGAGCAGTGCTGATGGTGCCA...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR GCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTAGGAGCGGGCTCTCGTaGTTTCTGGCAAACATGGAC +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTRSGLS*FLANMD
Trigger: GTCCATGTTTGCCAGAAAGCACGAGAGCCCGCTCCT...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR GCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTGTGAGACGTGCCCTCTaGTTTCTTGAGGTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTVRRAL*FLEVSG
Trigger: CCCGGAAACCTCAAGAAAGCAGAGGGCACGTCTCAC...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR GCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTTGCTCTCGGCATTGCTaGTGTGACTCTGACAGCTGG +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTCSRHC*CDSDSW
Trigger: CCAGCTGTCAGAGTCACAGCAGCAATGCCGAGAGCA...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR GCA 90 bp TCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATTCACAGCTGCCTCTGCTGCTCTCGGCATTaGTGCTGTGACTCTGACAGC +
Preference number: 4 (lower is better)
Translates to: SNISNRNSRQHRDIHSCLCCSRH*CCDSDS
Trigger: GCTGTCAGAGTCACAGCAGCAATGCCGAGAGCAGCA...GAGGCAGCTGTGAATGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTTGCTGCTCTCGGCATTaGTGCTGTGACTCTGACAGC +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTCCSRH*CCDSDS
Trigger: GCTGTCAGAGTCACAGCAGCAATGCCGAGAGCAGCA...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR GCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTGTGACAGTGAGTGTCTaGCCCTCTGAGAAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTVTVSV*PSEKLD
Trigger: GTCCAGCTTCTCAGAGGGGCAGACACTCACTGTCAC...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR GCA 90 bp TCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTCGAAGGCGGATCTTCTaGTTCAGCTCCTGGATCTCT +
Preference number: 4 (lower is better)
Translates to: SLDQDDLAALQAKEQQPFRRRIF*FSSWIS
Trigger: AGAGATCCAGGAGCTGAAGCAGAAGATCCGCCTTCG...AAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR GCA 90 bp GCATCCTCTATGCTTCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATTCTTGGTGCGGATTTaGTGGCGCCGAAGGCGGATC +
Preference number: 4 (lower is better)
Translates to: ASSMLQIFQTGTPGNIGTFLVRI*WRRRRI
Trigger: GATCCGCCTTCGGCGCCAGCAAATCCGCACCAAGAA...TGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGAAGCATAGAGGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp TCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATTCACAGCTGCCTCACCCGAAAGCTTCCGTaGTCAGCCTCCTGGTACATG +
Preference number: 4 (lower is better)
Translates to: SNISNRNSRQHRDIHSCLTRKLP*SASWYM
Trigger: CATGTACCAGGAGGCTGAGCACGGAAGCTTTCGGGT...GAGGCAGCTGTGAATGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp ATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTCCAGTTCAGGAAACGAAGGATTTaGTGCTTGAGGCTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: IRMIWLLSRLRNSSPFQFRKRRI*CLRLCS
Trigger: GGAACACAGCCTCAAGCAGCAAATCCTTCGTTTCCT...GAACTGGAAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR GCA 90 bp AAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTGACTGCGCACTGTTTATGTCCTaGACGTTGAAGAGAGGATCA +
Preference number: 4 (lower is better)
Translates to: KLSVTTDSGPINLPTADCALFMS*TLKRGS
Trigger: TGATCCTCTCTTCAACGTGCAGGACATAAACAGTGC...GCAGTCAGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp TTCAAAGAGTGGCTCAGTTCTGCAACAGGTGTGACCCGGCCCGGAGGGAGGGCTAAGAACACTATCACCTaGCTTCATTTAGAAGGAATT +
Preference number: 4 (lower is better)
Translates to: FKEWLSSATGVTRPGGRAKNTIT*LHLEGI
Trigger: AATTCCTTCTAAATGAAGGCAGGTGATAGTGTTCTT...AGCCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCTTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp AAGGGGAGAGAACGGAGTCGGGTTGTACTTTTACTCAGAAGCACAACGACCATCGTAGGAATGAGACGATaGGTGATGAGCTCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: KGRERSRVVLLLRSTTTIVGMRR*VMSSVC
Trigger: GCACACTGAGCTCATCACGCATCGTCTCATTCCTAC...GATGGTCGTTGTGCTTCTGAGTAAAAGTACAACCCGACTCCGTTCTCTCCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp GCATCCTCTATGCTTCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACAGGGTGTATGTGGAACTaGGCAGGGCTGTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: ASSMLQIFQTGTPGNIGTGCMWN*AGLSGS
Trigger: AGAGCCTGACAGCCCTGCCCAGTTCCACATACACCC...TGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGAAGCATAGAGGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp TCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATTCACAGCTGCCTCTTGGAGGGGTGTATGTaGAACTGGGCAGGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: SNISNRNSRQHRDIHSCLLEGCM*NWAGLS
Trigger: TGACAGCCCTGCCCAGTTCCACATACACCCCTCCAA...GAGGCAGCTGTGAATGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTTTGGAGGGGTGTATGTaGAACTGGGCAGGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTLEGCM*NWAGLS
Trigger: TGACAGCCCTGCCCAGTTCCACATACACCCCTCCAA...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR CCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTTTGGGCACGGATTGGTaGAGGCTAGAGAAGGACCCA +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTLGTDW*RLEKDP
Trigger: TGGGTCCTTCTCTAGCCTCCACCAATCCGTGCCCAA...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR CCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTTCTCTGAGCCATTGTTaGGCACGGATTGGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTSLSHC*ARIGGG
Trigger: GCCTCCACCAATCCGTGCCCAACAATGGCTCAGAGA...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR CCA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGTCAAAGGGGAATCCCTaGCTAGTGCAGAGACTGAAA +
Preference number: 4 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKSKGNP*LVQRLK
Trigger: TTTCAGTCTCTGCACTAGCCAGGGATTCCCCTTTGA...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGGGAGCTCATTTCATTTaGGGTCAAAGGGGAATCCCT +
Preference number: 4 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKGAHFI*GQRGIP
Trigger: AGGGATTCCCCTTTGACCCCAAATGAAATGAGCTCC...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp CCCCTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGGAGCTCATTTCATTTaGGGTCAAAGGGGAATCCCT +
Preference number: 4 (lower is better)
Translates to: PLTRGSLDQDDLAALQAKGAHFI*GQRGIP
Trigger: AGGGATTCCCCTTTGACCCCAAATGAAATGAGCTCC...CTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp TCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATTCACAGCTGCCTCACTCAGGCCCCTCACTaGCATCACCTGGGGAATCAT +
Preference number: 4 (lower is better)
Translates to: SNISNRNSRQHRDIHSCLTQAPH*HHLGNH
Trigger: ATGATTCCCCAGGTGATGCCAGTGAGGGGCCTGAGT...GAGGCAGCTGTGAATGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTACTCAGGCCCCTCACTaGCATCACCTGGGGAATCAT +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTTQAPH*HHLGNH
Trigger: ATGATTCCCCAGGTGATGCCAGTGAGGGGCCTGAGT...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR CCA 90 bp CACCTCATTTTAAGTGACAGTTACACCATGCACCAGAAACCCAGAGAAGTGAAGGGTCCAAGTTGCCAATaGCCAGGTACTCAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: HLILSDSYTMHQKPREVKGPSCQ*PGTQAP
Trigger: AGGGGCCTGAGTACCTGGCCATTGGCAACTTGGACC...CTTCACTTCTCTGGGTTTCTGGTGCATGGTGTAACTGTCACTTAAAATGAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp CCCCTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGTGGAGGAGAACAAATTaGAACTGCTGCTCTCGGCAT +
Preference number: 4 (lower is better)
Translates to: PLTRGSLDQDDLAALQAKWRRTN*NCCSRH
Trigger: ATGCCGAGAGCAGCAGTTCCAATTTGTTCTCCTCCA...CTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp ATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTCCAGTTCATGCTGGTATCCGAATaGGAGCGAATGTGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: IRMIWLLSRLRNSSPFQFMLVSE*ERMWLF
Trigger: GAAAAGCCACATTCGCTCCCATTCGGATACCAGCAT...GAACTGGAAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTCCCTGGAGGCAATGCTaGTATCCGAATGGGAGCGAA +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTPWRQC*YPNGSE
Trigger: TTCGCTCCCATTCGGATACCAGCATTGCCTCCAGGG...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR CCA 90 bp CAGCAGCAGGAGAGGTGGTTGAGAAAGGCCTGGCTCAGAAGCTCCAGAACTGAAACTTCATTAGCTCGATaGCAGCAATTAAGGACTCTG +
Preference number: 4 (lower is better)
Translates to: QQQERWLRKAWLRSSRTETSLAR*QQLRTL
Trigger: CAGAGTCCTTAATTGCTGCCATCGAGCTAATGAAGT...TTCAGTTCTGGAGCTTCTGAGCCAGGCCTTTCTCAACCACCTCTCCTGCTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp GTTTACAAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTTCCTCCTCTAGGCACTaGCTCATCATGTTGCACTTC +
Preference number: 4 (lower is better)
Translates to: VYKLSVTTDSGPINLPTASSSRH*LIMLHF
Trigger: GAAGTGCAACATGATGAGCCAGTGCCTAGAGGAGGA...AGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTTGTAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp GCATCCTCTATGCTTCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATTGGTGCGGATTTGCTaGCGCCGAAGGCGGATCTTC +
Preference number: 4 (lower is better)
Translates to: ASSMLQIFQTGTPGNIGTLVRIC*RRRRIF
Trigger: GAAGATCCGCCTTCGGCGCCAGCAAATCCGCACCAA...TGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGAAGCATAGAGGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp ACGAAAGCTCTAAATCCTTGGCAGAGAACGTCAAAAACAGCCTCATTTAAGTGGTGGGGAGCAGGTTCTTaGTGCGGATTTGCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: TKALNPWQRTSKTASFKWWGAGS*CGFAGA
Trigger: GGCGCCAGCAAATCCGCACCAAGAACCTGCTCCCCA...CCACTTAAATGAGGCTGTTTTTGACGTTCTCTGCCAAGGATTTAGAGCTTTCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp CACCTCATTTTAAGTGACAGTTACACCATGCACCAGAAACCCAGAGAAGTGAAGTCACGTGAGCTGAACTaGGAGCTGCTGGAGGTGACC +
Preference number: 4 (lower is better)
Translates to: HLILSDSYTMHQKPREVKSRELN*ELLEVT
Trigger: GGTCACCTCCAGCAGCTCCCAGTTCAGCTCACGTGA...CTTCACTTCTCTGGGTTTCTGGTGCATGGTGTAACTGTCACTTAAAATGAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp AGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGGCGGCAATTTTCCTCGTTaGGGCTGGATGAACATTAAA +
Preference number: 4 (lower is better)
Translates to: RPQTLEELGLAVSSTDRGGNFPR*GWMNIK
Trigger: TTTAATGTTCATCCAGCCCCAACGAGGAAAATTGCC...GCCTCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp TGTGGCCCCCAAAATACCCAAATAAGTGGACGAAATGCCCATGACGTAGTCCTAATCTGGGCATTCTCGTaGCAGCACTGGCAGAAGTAC +
Preference number: 4 (lower is better)
Translates to: CGPQNTQISGRNAHDVVLIWAFS*QHWQKY
Trigger: GTACTTCTGCCAGTGCTGCCACGAGAATGCCCAGAT...TAGGACTACGTCATGGGCATTTCGTCCACTTATTTGGGTATTTTGGGGGCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp GAGCCTGGCCTGAGCATCAGTTCTGTTCTTTGCTTCAAGATCACCAAGGTAGATCTCTGTCAGGTGGCCTaGGACTGTGTCAAAGGAATC +
Preference number: 4 (lower is better)
Translates to: EPGLSISSVLCFKITKVDLCQVA*DCVKGI
Trigger: GATTCCTTTGACACAGTCCCAGGCCACCTGACAGAG...ATCTACCTTGGTGATCTTGAAGCAAAGAACAGAACTGATGCTCAGGCCAGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp GTTTACAAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTCAGGTCCGGCACTTATaGAGCTCAAAGGGAAAGATG +
Preference number: 4 (lower is better)
Translates to: VYKLSVTTDSGPINLPTAQVRHL*SSKGKM
Trigger: CATCTTTCCCTTTGAGCTCCATAAGTGCCGGACCTG...AGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTTGTAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp TGTGGCCCCCAAAATACCCAAATAAGTGGACGAAATGCCCATGACGTAGTCCTAGAAGGCCACAGACGCTaGAAGAACTTGGTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: CGPQNTQISGRNAHDVVLEGHRR*KNLVLL
Trigger: CAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCTTC...TAGGACTACGTCATGGGCATTTCGTCCACTTATTTGGGTATTTTGGGGGCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp CAAGACGGCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGAAGAAAGTCAGCTTGTaGCATCCTCTATGCTTCAAA +
Preference number: 4 (lower is better)
Translates to: QDGTSVLQRSDLEKELDVKKVSL*HPLCFK
Trigger: TTTGAAGCATAGAGGATGCCACAAGCTGACTTTCTT...CACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGCCGTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp CAAGACGGCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGAGAACTTCTGGGACTTaGCTTTTTGAGTCTCACTAT +
Preference number: 4 (lower is better)
Translates to: QDGTSVLQRSDLEKELDVRTSGT*LFESHY
Trigger: ATAGTGAGACTCAAAAAGCCAAGTCCCAGAAGTTCT...CACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGCCGTCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp TGTGGCCCCCAAAATACCCAAATAAGTGGACGAAATGCCCATGACGTAGTCCTAAAGCACCACAGCAGGTaGAAACGCAGTTCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: CGPQNTQISGRNAHDVVLKHHSR*KRSSEH
Trigger: GTGCTCTGAACTGCGTTTCCACCTGCTGTGGTGCTT...TAGGACTACGTCATGGGCATTTCGTCCACTTATTTGGGTATTTTGGGGGCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp GCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGTCACCTTTATCATCTTATCTCCTaGTTTAGTCCCTGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: AHLSSSAVTWRKSWMCHLYHLIS*FSPWQG
Trigger: TCCTTGCCAGGGACTAAACCAGGAGATAAGATGATA...AAGGTGACACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CCA 90 bp GTTTACAAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTCTCTGGCATGGTGTCTaGAACACGGAGGCATCTATA +
Preference number: 4 (lower is better)
Translates to: VYKLSVTTDSGPINLPTALWHGV*NTEASI
Trigger: TATAGATGCCTCCGTGTTCCAGACACCATGCCAGAG...AGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTTGTAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CCA 90 bp CTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAACTTCCTCAAGCTAAGTaGCAAGAACCCCAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: LTRGSLDQDDLAALQAKELPQAK*QEPQVH
Trigger: GTGGACCTGGGGTTCTTGCCACTTAGCTTGAGGAAG...TTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR TCA 90 bp CACCTCATTTTAAGTGACAGTTACACCATGCACCAGAAACCCAGAGAAGTGAAGGTTGGGGCTGTTGGTTaGTACCAAACCCTCCACCGT +
Preference number: 4 (lower is better)
Translates to: HLILSDSYTMHQKPREVKVGAVG*YQTLHR
Trigger: ACGGTGGAGGGTTTGGTATCAACCAACAGCCCCAAC...CTTCACTTCTCTGGGTTTCTGGTGCATGGTGTAACTGTCACTTAAAATGAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp TCTTTGTACTCTCAGCTCTGGCATGGTGTCTGGAACACGGAGGCATCTATAGATAGTAGATCTTCTCTCTaGGCCATTGTTGGGCACGGA +
Preference number: 4 (lower is better)
Translates to: SLYSQLWHGVWNTEASIDSRSSL*AIVGHG
Trigger: TCCGTGCCCAACAATGGCTCAGAGAGAAGATCTACT...ATCTATAGATGCCTCCGTGTTCCAGACACCATGCCAGAGCTGAGAGTACAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR TCA 90 bp AGAATTCAATCCCAGAACAAAAATGATGCAGGCTTTAGTTCACAGAGCTGCCAGGGGGCTTGGATGGTTTaGTCCTCTGCTGGTGAGACG +
Preference number: 4 (lower is better)
Translates to: RIQSQNKNDAGFSSQSCQGAWMV*SSAGET
Trigger: CGTCTCACCAGCAGAGGATCAAACCATCCAAGCCCC...CTGGCAGCTCTGTGAACTAAAGCCTGCATCATTTTTGTTCTGGGATTGAATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTAATCATTCTGGCTGCTaGCCCAGGATGCCTCTATGG +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTNHSGC*PRMPLW
Trigger: CCATAGAGGCATCCTGGGTCAGCAGCCAGAATGATT...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR TCA 90 bp GAGCCTGGCCTGAGCATCAGTTCTGTTCTTTGCTTCAAGATCACCAAGGTAGATGACAGAACTCACAGATaGAGCCTTTGGCTTGGCAGA +
Preference number: 4 (lower is better)
Translates to: EPGLSISSVLCFKITKVDDRTHR*SLWLGR
Trigger: TCTGCCAAGCCAAAGGCTTCATCTGTGAGTTCTGTC...ATCTACCTTGGTGATCTTGAAGCAAAGAACAGAACTGATGCTCAGGCCAGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp AAGGGGAGAGAACGGAGTCGGGTTGTACTTTTACTCAGAAGCACAACGACCATCGACAGCTTCCAGACTTaGAGCAGGCTTTATGGTAAC +
Preference number: 4 (lower is better)
Translates to: KGRERSRVVLLLRSTTTIDSFQT*SRLYGN
Trigger: GTTACCATAAAGCCTGCTTCAAGTCTGGAAGCTGTC...GATGGTCGTTGTGCTTCTGAGTAAAAGTACAACCCGACTCCGTTCTCTCCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp AAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTGACTGCGCTTTTCTCCAACTTTaGCCAAAGAAGCTAAGGCAA +
Preference number: 4 (lower is better)
Translates to: KLSVTTDSGPINLPTADCAFLQL*PKKLRQ
Trigger: TTGCCTTAGCTTCTTTGGTCAAAGTTGGAGAAAAGC...GCAGTCAGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp GAAGTGGTTCGCTCGAGGTCTCATGGCAAGTTAGAGACACAGCCACTCCACCTCAGCATTGTCATCCTTTaGTCCTATGCTGATGTGAAA +
Preference number: 4 (lower is better)
Translates to: EVVRSRSHGKLETQPLHLSIVIL*SYADVK
Trigger: TTTCACATCAGCATAGGATCAAAGGATGACAATGCT...GAGGTGGAGTGGCTGTGTCTCTAACTTGCCATGAGACCTCGAGCGAACCACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp GGAGTAGGAATGAGACGATGCGTGATGAGCTCAGTGTGCCACTTACAGAGGAAGTCTTCTGCTATGTCTTaGATCTTGTCTCCACCTGGT +
Preference number: 4 (lower is better)
Translates to: GVGMRRCVMSSVCHLQRKSSAMS*ILSPPG
Trigger: ACCAGGTGGAGACAAGATTCAAGACATAGCAGAAGA...CTTCCTCTGTAAGTGGCACACTGAGCTCATCACGCATCGTCTCATTCCTACTCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp AAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTGACTGCACACCTCATTTTAAGTaGCAGTTACACCATGCACCA +
Preference number: 4 (lower is better)
Translates to: KLSVTTDSGPINLPTADCTPHFK*QLHHAP
Trigger: TGGTGCATGGTGTAACTGTCACTTAAAATGAGGTGT...GCAGTCAGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp CAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGACTCGCACTCCTTTTAACACCTCATTTTAAGTaGCAGTTACACCATGCACCA +
Preference number: 4 (lower is better)
Translates to: QSTGGTHGTSLLRLALLLTPHFK*QLHHAP
Trigger: TGGTGCATGGTGTAACTGTCACTTAAAATGAGGTGT...TAAAAGGAGTGCGAGTCTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp CACCCTCAATGGGAGAAGGAATTAAACTCCACCTCCTGGGAGAATTTACGTATTGGAGAAGACAGGAGATaGGGACACGCTCACTACTGC +
Preference number: 4 (lower is better)
Translates to: HPQWEKELNSTSWENLRIGEDRR*GHAHYC
Trigger: GCAGTAGTGAGCGTGTCCTCATCTCCTGTCTTCTCC...AATACGTAAATTCTCCCAGGAGGTGGAGTTTAATTCCTTCTCCCATTGAGGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR GCA 90 bp AGAATTCAATCCCAGAACAAAAATGATGCAGGCTTTAGTTCACAGAGCTGCCAGGAGCTGGGATGCAGCTaGAATCTACACTCGCAGGGG +
Preference number: 4 (lower is better)
Translates to: RIQSQNKNDAGFSSQSCQELGCS*NLHSQG
Trigger: CCCCTGCGAGTGTAGATTGCAGCTGCATCCCAGCTC...CTGGCAGCTCTGTGAACTAAAGCCTGCATCATTTTTGTTCTGGGATTGAATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273582.9
CDS-3UTR GCA 90 bp CACCTCATTTTAAGTGACAGTTACACCATGCACCAGAAACCCAGAGAAGTGAAGCGCAGGAACCGTCACTaGAGCGTTTGCTTTGCGTTC +
Preference number: 4 (lower is better)
Translates to: HLILSDSYTMHQKPREVKRRNRH*SVCFAF
Trigger: GAACGCAAAGCAAACGCTGCAGTGACGGTTCCTGCG...CTTCACTTCTCTGGGTTTCTGGTGCATGGTGTAACTGTCACTTAAAATGAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273582.9
CDS-3UTR GCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTGCCCGTGATAGAGGATaGTCTGCATGTCCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTARDRG*SACPCK
Trigger: TTTGCAGGGACATGCAGAGCATCCTCTATCACGGGC...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR GCA 90 bp TCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATTCACAGCTGCCTCCTCTGGTCGTTCTCGTaGACGCTGATGAACTTCTCC +
Preference number: 4 (lower is better)
Translates to: SNISNRNSRQHRDIHSCLLWSFS*TLMNFS
Trigger: GGAGAAGTTCATCAGCGTGCACGAGAACGACCAGAG...GAGGCAGCTGTGAATGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTCTCTGGTCGTTCTCGTaGACGCTGATGAACTTCTCC +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTLWSFS*TLMNFS
Trigger: GGAGAAGTTCATCAGCGTGCACGAGAACGACCAGAG...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR GCA 90 bp AGAATTCAATCCCAGAACAAAAATGATGCAGGCTTTAGTTCACAGAGCTGCCAGCTCGGGGGTCCAAGTTaGCAATGGCCAGGTACTCAG +
Preference number: 4 (lower is better)
Translates to: RIQSQNKNDAGFSSQSCQLGGPS*QWPGTQ
Trigger: CTGAGTACCTGGCCATTGGCAACTTGGACCCCCGAG...CTGGCAGCTCTGTGAACTAAAGCCTGCATCATTTTTGTTCTGGGATTGAATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp CACCTCATTTTAAGTGACAGTTACACCATGCACCAGAAACCCAGAGAAGTGAAGTGCTGCTCTCGGCATTaGTGCTGTGACTCTGACAGC +
Preference number: 4 (lower is better)
Translates to: HLILSDSYTMHQKPREVKCCSRH*CCDSDS
Trigger: GCTGTCAGAGTCACAGCAGCAATGCCGAGAGCAGCA...CTTCACTTCTCTGGGTTTCTGGTGCATGGTGTAACTGTCACTTAAAATGAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTCTGGCTTCTGGGAGCTaGTGGAGGAGAACAAATTGG +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTLASGS*WRRTNW
Trigger: CCAATTTGTTCTCCTCCAGCAGCTCCCAGAAGCCAG...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR GCA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGAAACGAAGGATTTGCTaGTTGAGGCTGTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKKRRIC*LRLCSF
Trigger: GAAGGAACACAGCCTCAAGCAGCAAATCCTTCGTTT...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp CTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAAACTGGCAGAAGTACTTaGCCAGGTACTCACAGTACC +
Preference number: 4 (lower is better)
Translates to: LTRGSLDQDDLAALQAKETGRST*PGTHST
Trigger: GGTACTGTGAGTACCTGGGCAAGTACTTCTGCCAGT...TTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR GCA 90 bp ACGAAAGCTCTAAATCCTTGGCAGAGAACGTCAAAAACAGCCTCATTTAAGTGGCTGCCGACGGCTGACTaGACACAGACGTCAGACAAG +
Preference number: 4 (lower is better)
Translates to: TKALNPWQRTSKTASFKWLPTAD*TQTSDK
Trigger: CTTGTCTGACGTCTGTGTGCAGTCAGCCGTCGGCAG...CCACTTAAATGAGGCTGTTTTTGACGTTCTCTGCCAAGGATTTAGAGCTTTCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp TGTGGCCCCCAAAATACCCAAATAAGTGGACGAAATGCCCATGACGTAGTCCTAATGGCATCAGGGACCTaGCTGAGCTTCAAAGATCAC +
Preference number: 4 (lower is better)
Translates to: CGPQNTQISGRNAHDVVLMASGT*LSFKDH
Trigger: GTGATCTTTGAAGCTCAGGCAGGTCCCTGATGCCAT...TAGGACTACGTCATGGGCATTTCGTCCACTTATTTGGGTATTTTGGGGGCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp TTCACAGCTGCCTCTGAGGTCTCTGAGGAGTCTAGGATAGTCAGGATTGTTCTGTTTAGTTCACAGAGCTaGCAGCTCTTGGAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: FTAASEVSEESRIVRIVLFSSQS*QLLEKP
Trigger: TGGCTTCTCCAAGAGCTGGCAGCTCTGTGAACTAAA...CAGAACAATCCTGACTATCCTAGACTCCTCAGAGACCTCAGAGGCAGCTGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp AGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGGCTTTACAGTGGACACATaGCATTTCTTGACAGTCAAG +
Preference number: 4 (lower is better)
Translates to: RPQTLEELGLAVSSTDRGFTVDT*HFLTVK
Trigger: CTTGACTGTCAAGAAATGGCATGTGTCCACTGTAAA...GCCTCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp AAGGGGAGAGAACGGAGTCGGGTTGTACTTTTACTCAGAAGCACAACGACCATCGAGAAAGATGCTAGCTaGTCACAGAAGTGGGAACTG +
Preference number: 4 (lower is better)
Translates to: KGRERSRVVLLLRSTTTIEKDAS*SQKWEL
Trigger: CAGTTCCCACTTCTGTGAGCAGCTAGCATCTTTCTC...GATGGTCGTTGTGCTTCTGAGTAAAAGTACAACCCGACTCCGTTCTCTCCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTGGCTCTCGTGCTTTCTaGCAAACATGGACGCATCGA +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTGSRAF*QTWTHR
Trigger: TCGATGCGTCCATGTTTGCCAGAAAGCACGAGAGCC...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR CCA 90 bp TTCACAGCTGCCTCTGAGGTCTCTGAGGAGTCTAGGATAGTCAGGATTGTTCTGCTGAGCATAGCTGTTTaGAGGGGTGTATGTGGAACT +
Preference number: 4 (lower is better)
Translates to: FTAASEVSEESRIVRIVLLSIAV*RGVCGT
Trigger: AGTTCCACATACACCCCTCCAAACAGCTATGCTCAG...CAGAACAATCCTGACTATCCTAGACTCCTCAGAGACCTCAGAGGCAGCTGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp CACCTCATTTTAAGTGACAGTTACACCATGCACCAGAAACCCAGAGAAGTGAAGTTGGGCACGGATTGGTaGAGGCTAGAGAAGGACCCA +
Preference number: 4 (lower is better)
Translates to: HLILSDSYTMHQKPREVKLGTDW*RLEKDP
Trigger: TGGGTCCTTCTCTAGCCTCCACCAATCCGTGCCCAA...CTTCACTTCTCTGGGTTTCTGGTGCATGGTGTAACTGTCACTTAAAATGAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp CACCCTCAATGGGAGAAGGAATTAAACTCCACCTCCTGGGAGAATTTACGTATTTCTCTGAGCCATTGTTaGGCACGGATTGGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: HPQWEKELNSTSWENLRISLSHC*ARIGGG
Trigger: GCCTCCACCAATCCGTGCCCAACAATGGCTCAGAGA...AATACGTAAATTCTCCCAGGAGGTGGAGTTTAATTCCTTCTCCCATTGAGGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CCA 90 bp GAGCCTGGCCTGAGCATCAGTTCTGTTCTTTGCTTCAAGATCACCAAGGTAGATGGCTGGTCAGAGTACTaGAGCTCATTTCATTTGGGG +
Preference number: 4 (lower is better)
Translates to: EPGLSISSVLCFKITKVDGWSEY*SSFHLG
Trigger: CCCCAAATGAAATGAGCTCCAGTACTCTGACCAGCC...ATCTACCTTGGTGATCTTGAAGCAAAGAACAGAACTGATGCTCAGGCCAGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp TCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATTCACAGCTGCCTCATGCCTCTATGGGGCTaGTCAGAGTACTGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: SNISNRNSRQHRDIHSCLMPLWG*SEYWSS
Trigger: TGAGCTCCAGTACTCTGACCAGCCCCATAGAGGCAT...GAGGCAGCTGTGAATGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTATGCCTCTATGGGGCTaGTCAGAGTACTGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTMPLWG*SEYWSS
Trigger: TGAGCTCCAGTACTCTGACCAGCCCCATAGAGGCAT...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR CCA 90 bp AAGGGGAGAGAACGGAGTCGGGTTGTACTTTTACTCAGAAGCACAACGACCATCTGGAGGAGAACAAATTaGAACTGCTGCTCTCGGCAT +
Preference number: 4 (lower is better)
Translates to: KGRERSRVVLLLRSTTTIWRRTN*NCCSRH
Trigger: ATGCCGAGAGCAGCAGTTCCAATTTGTTCTCCTCCA...GATGGTCGTTGTGCTTCTGAGTAAAAGTACAACCCGACTCCGTTCTCTCCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp GCATCCTCTATGCTTCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACACCCTGGAGGCAATGCTaGTATCCGAATGGGAGCGAA +
Preference number: 4 (lower is better)
Translates to: ASSMLQIFQTGTPGNIGTPWRQC*YPNGSE
Trigger: TTCGCTCCCATTCGGATACCAGCATTGCCTCCAGGG...TGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGAAGCATAGAGGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp GAGCCTGGCCTGAGCATCAGTTCTGTTCTTTGCTTCAAGATCACCAAGGTAGATTCCTCCTCTAGGCACTaGCTCATCATGTTGCACTTC +
Preference number: 4 (lower is better)
Translates to: EPGLSISSVLCFKITKVDSSSRH*LIMLHF
Trigger: GAAGTGCAACATGATGAGCCAGTGCCTAGAGGAGGA...ATCTACCTTGGTGATCTTGAAGCAAAGAACAGAACTGATGCTCAGGCCAGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp GGAGTAGGAATGAGACGATGCGTGATGAGCTCAGTGTGCCACTTACAGAGGAAGTTCTGCTTCAGCTCCTaGATCTCTCTATCACTGTCT +
Preference number: 4 (lower is better)
Translates to: GVGMRRCVMSSVCHLQRKFCFSS*ISLSLS
Trigger: AGACAGTGATAGAGAGATCCAGGAGCTGAAGCAGAA...CTTCCTCTGTAAGTGGCACACTGAGCTCATCACGCATCGTCTCATTCCTACTCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp CCCCTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGTTCTGCTTCAGCTCCTaGATCTCTCTATCACTGTCT +
Preference number: 4 (lower is better)
Translates to: PLTRGSLDQDDLAALQAKFCFSS*ISLSLS
Trigger: AGACAGTGATAGAGAGATCCAGGAGCTGAAGCAGAA...CTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp CTAAGAGGGGAGGTAGAGGTGGTCACAATCCCGCCCCTCATGCCACAGTGTGCTTTTCCTCGTTGGGGCTaGATGAACATTAAAAATTAT +
Preference number: 4 (lower is better)
Translates to: LRGEVEVVTIPPLMPQCAFPRWG*MNIKNY
Trigger: ATAATTTTTAATGTTCATCCAGCCCCAACGAGGAAA...AGCACACTGTGGCATGAGGGGCGGGATTGTGACCACCTCTACCTCCCCTCTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CCA 90 bp CAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGACTCGCACTCCTTTTAGGCAATTTTCCTCGTTaGGGCTGGATGAACATTAAA +
Preference number: 4 (lower is better)
Translates to: QSTGGTHGTSLLRLALLLGNFPR*GWMNIK
Trigger: TTTAATGTTCATCCAGCCCCAACGAGGAAAATTGCC...TAAAAGGAGTGCGAGTCTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp TCTTTGTACTCTCAGCTCTGGCATGGTGTCTGGAACACGGAGGCATCTATAGATAGCGGTAATTCTGCTTaGCCACGGCAATTTTCCTCG +
Preference number: 4 (lower is better)
Translates to: SLYSQLWHGVWNTEASIDSGNSA*PRQFSS
Trigger: CGAGGAAAATTGCCGTGGCCAAGCAGAATTACCGCT...ATCTATAGATGCCTCCGTGTTCCAGACACCATGCCAGAGCTGAGAGTACAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CCA 90 bp GCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGTCACCTTAAGAAAGTCAGCTTGTaGCATCCTCTATGCTTCAAA +
Preference number: 4 (lower is better)
Translates to: AHLSSSAVTWRKSWMCHLKKVSL*HPLCFK
Trigger: TTTGAAGCATAGAGGATGCCACAAGCTGACTTTCTT...AAGGTGACACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp GAGCCTGGCCTGAGCATCAGTTCTGTTCTTTGCTTCAAGATCACCAAGGTAGATACGCTAAGAAGATGGTaGGTGAGGTTCCTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: EPGLSISSVLCFKITKVDTLRRW*VRFLSS
Trigger: TGAGGACAGGAACCTCACCCACCATCTTCTTAGCGT...ATCTACCTTGGTGATCTTGAAGCAAAGAACAGAACTGATGCTCAGGCCAGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp TCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATTCACAGCTGCCTCGACACGCTAAGAAGATaGTGGGTGAGGTTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: SNISNRNSRQHRDIHSCLDTLRR*WVRFLS
Trigger: GGACAGGAACCTCACCCACCATCTTCTTAGCGTGTC...GAGGCAGCTGTGAATGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp TGTGGCCCCCAAAATACCCAAATAAGTGGACGAAATGCCCATGACGTAGTCCTAGTGATCCCCCTGCCTTaGTCTCTCAAAGTACTGGAT +
Preference number: 4 (lower is better)
Translates to: CGPQNTQISGRNAHDVVLVIPLP*SLKVLD
Trigger: ATCCAGTACTTTGAGAGACCAAGGCAGGGGGATCAC...TAGGACTACGTCATGGGCATTTCGTCCACTTATTTGGGTATTTTGGGGGCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CCA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGTCTGATGATGACTGCTaGACAAACACAACAGGAGCA +
Preference number: 4 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKSDDDC*TNTTGA
Trigger: TGCTCCTGTTGTGTTTGTCCAGCAGTCATCATCAGA...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CCA 90 bp TCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATTCACAGCTGCCTCCCATGTTGGCCAGGATaGTCCCAATCTCTTGACCTC +
Preference number: 4 (lower is better)
Translates to: SNISNRNSRQHRDIHSCLPCWPG*SQSLDL
Trigger: GAGGTCAAGAGATTGGGACCATCCTGGCCAACATGG...GAGGCAGCTGTGAATGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTGTGTTCCTCATTACCTaGAGCTCCCCTGGAGGCAAT +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTVFLIT*SSPGGN
Trigger: ATTGCCTCCAGGGGAGCTCCAGGTAATGAGGAACAC...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449205.1
3UTR CAA 72 bp AGTCACAGCCCTTCAGAACTTCTGGGACTTGGCTTTTaGAGTCTCACTATGAACAGAAGGGAGAACAGCCTC +
Preference number: 4 (lower is better)
Translates to: SHSPSELLGLGF*SLTMNRRENSL
Trigger: GAGGCTGTTCTCCCTTCTGTTCATAGTGAGACTCAAAAAGCCAAGTCCCAGAAGTTCTGAAGGGCTGTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTAGTAGATCTTCTCTCTaGGCCATTGTTGGGCACGGA +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTSRSSL*AIVGHG
Trigger: TCCGTGCCCAACAATGGCTCAGAGAGAAGATCTACT...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR TCA 90 bp ACGAAAGCTCTAAATCCTTGGCAGAGAACGTCAAAAACAGCCTCATTTAAGTGGGAGGGACTGTCCTTCTaGTGGTCTTCGGAACATGCC +
Preference number: 4 (lower is better)
Translates to: TKALNPWQRTSKTASFKWEGLSF*WSSEHA
Trigger: GGCATGTTCCGAAGACCATCAGAAGGACAGTCCCTC...CCACTTAAATGAGGCTGTTTTTGACGTTCTCTGCCAAGGATTTAGAGCTTTCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp TGTGGCCCCCAAAATACCCAAATAAGTGGACGAAATGCCCATGACGTAGTCCTAGAAGGATTTGCTGCTTaGGGCTGTGTTCCTTCTGAT +
Preference number: 4 (lower is better)
Translates to: CGPQNTQISGRNAHDVVLEGFAA*GCVPSD
Trigger: ATCAGAAGGAACACAGCCTCAAGCAGCAAATCCTTC...TAGGACTACGTCATGGGCATTTCGTCCACTTATTTGGGTATTTTGGGGGCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp TGTGGCCCCCAAAATACCCAAATAAGTGGACGAAATGCCCATGACGTAGTCCTACCAGTCGGCAAGTCTTaGACATGTTCTTCATGTGAC +
Preference number: 4 (lower is better)
Translates to: CGPQNTQISGRNAHDVVLPVGKS*TCSSCD
Trigger: GTCACATGAAGAACATGTTCAAGACTTGCCGACTGG...TAGGACTACGTCATGGGCATTTCGTCCACTTATTTGGGTATTTTGGGGGCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp GTTTACAAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTGCTCAAAGGGAAAGATaGTGTCATCCTCATTCTGAC +
Preference number: 4 (lower is better)
Translates to: VYKLSVTTDSGPINLPTAAQRER*CHPHSD
Trigger: GTCAGAATGAGGATGACATCATCTTTCCCTTTGAGC...AGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTTGTAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp GAGCCTGGCCTGAGCATCAGTTCTGTTCTTTGCTTCAAGATCACCAAGGTAGATGACAGCTTCCAGACTTaGAGCAGGCTTTATGGTAAC +
Preference number: 4 (lower is better)
Translates to: EPGLSISSVLCFKITKVDDSFQT*SRLYGN
Trigger: GTTACCATAAAGCCTGCTTCAAGTCTGGAAGCTGTC...ATCTACCTTGGTGATCTTGAAGCAAAGAACAGAACTGATGCTCAGGCCAGGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp GAGCCTGGCCTGAGCATCAGTTCTGTTCTTTGCTTCAAGATCACCAAGGTAGATATTCTTAAAGCTCCCTaGAGGACCTGGGCACTTCTA +
Preference number: 4 (lower is better)
Translates to: EPGLSISSVLCFKITKVDILKAP*RTWALL
Trigger: TAGAAGTGCCCAGGTCCTTCAGGGAGCTTTAAGAAT...ATCTACCTTGGTGATCTTGAAGCAAAGAACAGAACTGATGCTCAGGCCAGGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTGTTGTTCTGTTCCACTaGTTCCAGGCACTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTVVLFH*FQALQH
Trigger: ATGCTGCAGTGCCTGGAAGCAGTGGAACAGAACAAC...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR GCA 90 bp AGAATTCAATCCCAGAACAAAAATGATGCAGGCTTTAGTTCACAGAGCTGCCAGTGCTGCTCTCGGCATTaGTGCTGTGACTCTGACAGC +
Preference number: 4 (lower is better)
Translates to: RIQSQNKNDAGFSSQSCQCCSRH*CCDSDS
Trigger: GCTGTCAGAGTCACAGCAGCAATGCCGAGAGCAGCA...CTGGCAGCTCTGTGAACTAAAGCCTGCATCATTTTTGTTCTGGGATTGAATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp CTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAAACAAATTGGAACTGCTaGTCTCGGCATTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LTRGSLDQDDLAALQAKETNWNC*SRHCCC
Trigger: ACAGCAGCAATGCCGAGAGCAGCAGTTCCAATTTGT...TTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR GCA 90 bp CTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAAAGAACAAATTGGAACTaGTGCTCTCGGCATTGCTGC +
Preference number: 4 (lower is better)
Translates to: LTRGSLDQDDLAALQAKERTNWN*CSRHCC
Trigger: GCAGCAATGCCGAGAGCAGCAGTTCCAATTTGTTCT...TTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR GCA 90 bp TTCACAGCTGCCTCTGAGGTCTCTGAGGAGTCTAGGATAGTCAGGATTGTTCTGACTGGCTCATCATGTTaGACTTCATTAGCTCGATGG +
Preference number: 4 (lower is better)
Translates to: FTAASEVSEESRIVRIVLTGSSC*TSLARW
Trigger: CCATCGAGCTAATGAAGTGCAACATGATGAGCCAGT...CAGAACAATCCTGACTATCCTAGACTCCTCAGAGACCTCAGAGGCAGCTGTGAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp GCATCCTCTATGCTTCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACACGAAGGCGGATCTTCTaGTTCAGCTCCTGGATCTCT +
Preference number: 4 (lower is better)
Translates to: ASSMLQIFQTGTPGNIGTRRRIF*FSSWIS
Trigger: AGAGATCCAGGAGCTGAAGCAGAAGATCCGCCTTCG...TGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGAAGCATAGAGGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp GTTTACAAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTAAACGAAGGATTTGCTaGTTGAGGCTGTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: VYKLSVTTDSGPINLPTAKRRIC*LRLCSF
Trigger: GAAGGAACACAGCCTCAAGCAGCAAATCCTTCGTTT...AGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTTGTAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp AGAATTCAATCCCAGAACAAAAATGATGCAGGCTTTAGTTCACAGAGCTGCCAGTCAGCAGACGTGGAGTaGAGGAAGCAGTGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: RIQSQNKNDAGFSSQSCQSADVE*RKQWEK
Trigger: CTTCTCCCACTGCTTCCTGCACTCCACGTCTGCTGA...CTGGCAGCTCTGTGAACTAAAGCCTGCATCATTTTTGTTCTGGGATTGAATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp TCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATTCACAGCTGCCTCACTGGCAGAAGTACTTaGCCAGGTACTCACAGTACC +
Preference number: 4 (lower is better)
Translates to: SNISNRNSRQHRDIHSCLTGRST*PGTHST
Trigger: GGTACTGTGAGTACCTGGGCAAGTACTTCTGCCAGT...GAGGCAGCTGTGAATGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp AGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGGCCAGATAGTGGTAACTTaGAAAGTGCTTCCAAAACAT +
Preference number: 4 (lower is better)
Translates to: RPQTLEELGLAVSSTDRGQIVVT*KVLPKH
Trigger: ATGTTTTGGAAGCACTTTGCAAGTTACCACTATCTG...GCCTCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTGCTTTCTGGCAAACATaGACGCATCGATCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTAFWQT*THRSEP
Trigger: TGGCTCAGATCGATGCGTCCATGTTTGCCAGAAAGC...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR CCA 90 bp GAGCCTGGCCTGAGCATCAGTTCTGTTCTTTGCTTCAAGATCACCAAGGTAGATCTGAGCATAGCTGTTTaGAGGGGTGTATGTGGAACT +
Preference number: 4 (lower is better)
Translates to: EPGLSISSVLCFKITKVDLSIAV*RGVCGT
Trigger: AGTTCCACATACACCCCTCCAAACAGCTATGCTCAG...ATCTACCTTGGTGATCTTGAAGCAAAGAACAGAACTGATGCTCAGGCCAGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp GAGCCTGGCCTGAGCATCAGTTCTGTTCTTTGCTTCAAGATCACCAAGGTAGATTCAAAGGGGAATCCCTaGCTAGTGCAGAGACTGAAA +
Preference number: 4 (lower is better)
Translates to: EPGLSISSVLCFKITKVDSKGNP*LVQRLK
Trigger: TTTCAGTCTCTGCACTAGCCAGGGATTCCCCTTTGA...ATCTACCTTGGTGATCTTGAAGCAAAGAACAGAACTGATGCTCAGGCCAGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp CTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAATCAAAGGGGAATCCCTaGCTAGTGCAGAGACTGAAA +
Preference number: 4 (lower is better)
Translates to: LTRGSLDQDDLAALQAKESKGNP*LVQRLK
Trigger: TTTCAGTCTCTGCACTAGCCAGGGATTCCCCTTTGA...TTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTGGCTGGTCAGAGTACTaGAGCTCATTTCATTTGGGG +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTGWSEY*SSFHLG
Trigger: CCCCAAATGAAATGAGCTCCAGTACTCTGACCAGCC...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR CCA 90 bp ACGAAAGCTCTAAATCCTTGGCAGAGAACGTCAAAAACAGCCTCATTTAAGTGGACTCAGGCCCCTCACTaGCATCACCTGGGGAATCAT +
Preference number: 4 (lower is better)
Translates to: TKALNPWQRTSKTASFKWTQAPH*HHLGNH
Trigger: ATGATTCCCCAGGTGATGCCAGTGAGGGGCCTGAGT...CCACTTAAATGAGGCTGTTTTTGACGTTCTCTGCCAAGGATTTAGAGCTTTCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTGCTTCTGGGAGCTGCTaGAGGAGAACAAATTGGAAC +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTASGSC*RRTNWN
Trigger: GTTCCAATTTGTTCTCCTCCAGCAGCTCCCAGAAGC...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR CCA 90 bp TTCACAGCTGCCTCTGAGGTCTCTGAGGAGTCTAGGATAGTCAGGATTGTTCTGTTCTGCTTCAGCTCCTaGATCTCTCTATCACTGTCT +
Preference number: 4 (lower is better)
Translates to: FTAASEVSEESRIVRIVLFCFSS*ISLSLS
Trigger: AGACAGTGATAGAGAGATCCAGGAGCTGAAGCAGAA...CAGAACAATCCTGACTATCCTAGACTCCTCAGAGACCTCAGAGGCAGCTGTGAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp GCATCCTCTATGCTTCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACAGACACGCTAAGAAGATaGTGGGTGAGGTTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: ASSMLQIFQTGTPGNIGTDTLRR*WVRFLS
Trigger: GGACAGGAACCTCACCCACCATCTTCTTAGCGTGTC...TGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGAAGCATAGAGGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp GCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGTCACCTTAAAGCTCTAAATCCTTaGCAGAGAACGTCAAAAACA +
Preference number: 4 (lower is better)
Translates to: AHLSSSAVTWRKSWMCHLKALNP*QRTSKT
Trigger: TGTTTTTGACGTTCTCTGCCAAGGATTTAGAGCTTT...AAGGTGACACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp CACCTCATTTTAAGTGACAGTTACACCATGCACCAGAAACCCAGAGAAGTGAAGAGCCTCCCGAGTAGCTaGGATTACAAGCACATGCCA +
Preference number: 4 (lower is better)
Translates to: HLILSDSYTMHQKPREVKSLPSS*DYKHMP
Trigger: TGGCATGTGCTTGTAATCCCAGCTACTCGGGAGGCT...CTTCACTTCTCTGGGTTTCTGGTGCATGGTGTAACTGTCACTTAAAATGAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CCA 90 bp TCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATTCACAGCTGCCTCGCTCTTCATCCAGGATaGAGTGCAATGGAGCAAGCT +
Preference number: 4 (lower is better)
Translates to: SNISNRNSRQHRDIHSCLALHPG*SAMEQA
Trigger: AGCTTGCTCCATTGCACTCCATCCTGGATGAAGAGC...GAGGCAGCTGTGAATGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CCA 90 bp AGTGGACGAAATGCCCATGACGTAGTCCTATTCTCTGCTGCTTCTCCTCGGGGCTGGCAAGGAAAGAGCTaGCAGTTTAATAATAAAGTG +
Preference number: 4 (lower is better)
Translates to: SGRNAHDVVLFSAASPRGWQGKS*QFNNKV
Trigger: CACTTTATTATTAAACTGCCAGCTCTTTCCTTGCCA...GCCCCGAGGAGAAGCAGCAGAGAATAGGACTACGTCATGGGCATTTCGTCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CCA 90 bp TGTGGCCCCCAAAATACCCAAATAAGTGGACGAAATGCCCATGACGTAGTCCTAAAGGTTTCACCATGTTaGCCAGGATGGTCCCAATCT +
Preference number: 4 (lower is better)
Translates to: CGPQNTQISGRNAHDVVLKVSPC*PGWSQS
Trigger: AGATTGGGACCATCCTGGCCAACATGGTGAAACCTT...TAGGACTACGTCATGGGCATTTCGTCCACTTATTTGGGTATTTTGGGGGCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR TCA 90 bp AGAAGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGACTGTGTAGAATTTTCTaGTATACTGTCTATCCCCGA +
Preference number: 4 (lower is better)
Translates to: RRPQTLEELGLAVSSTDRLCRIF*YTVYPR
Trigger: TCGGGGATAGACAGTATATCAGAAAATTCTACACAG...TCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp AGAATTCAATCCCAGAACAAAAATGATGCAGGCTTTAGTTCACAGAGCTGCCAGAACATGTTCTTCATGTaGCACAGCTGGACCCGCAGC +
Preference number: 4 (lower is better)
Translates to: RIQSQNKNDAGFSSQSCQNMFFM*HSWTRS
Trigger: GCTGCGGGTCCAGCTGTGTCACATGAAGAACATGTT...CTGGCAGCTCTGTGAACTAAAGCCTGCATCATTTTTGTTCTGGGATTGAATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp CACCTCATTTTAAGTGACAGTTACACCATGCACCAGAAACCCAGAGAAGTGAAGGACAGAACTCACAGATaGAGCCTTTGGCTTGGCAGA +
Preference number: 4 (lower is better)
Translates to: HLILSDSYTMHQKPREVKDRTHR*SLWLGR
Trigger: TCTGCCAAGCCAAAGGCTTCATCTGTGAGTTCTGTC...CTTCACTTCTCTGGGTTTCTGGTGCATGGTGTAACTGTCACTTAAAATGAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp TTCACAGCTGCCTCTGAGGTCTCTGAGGAGTCTAGGATAGTCAGGATTGTTCTGATGTCATCCTCATTCTaGCAGAACTCACAGATGAAG +
Preference number: 4 (lower is better)
Translates to: FTAASEVSEESRIVRIVLMSSSF*QNSQMK
Trigger: CTTCATCTGTGAGTTCTGTCAGAATGAGGATGACAT...CAGAACAATCCTGACTATCCTAGACTCCTCAGAGACCTCAGAGGCAGCTGTGAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp GCATCCTCTATGCTTCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATGGACGAAATGCCCATaGCGTAGTCCTATTCTCTGC +
Preference number: 4 (lower is better)
Translates to: ASSMLQIFQTGTPGNIGTWTKCP*RSPILC
Trigger: GCAGAGAATAGGACTACGTCATGGGCATTTCGTCCA...TGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGAAGCATAGAGGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp TTCACAGCTGCCTCTGAGGTCTCTGAGGAGTCTAGGATAGTCAGGATTGTTCTGACAGTCAAGGCAGGCTaGCGAAAGACAGAATTTTAT +
Preference number: 4 (lower is better)
Translates to: FTAASEVSEESRIVRIVLTVKAG*RKTEFY
Trigger: ATAAAATTCTGTCTTTCGTCAGCCTGCCTTGACTGT...CAGAACAATCCTGACTATCCTAGACTCCTCAGAGACCTCAGAGGCAGCTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp AGAAGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGATTATGGGTTTCTGAATaGATGTCAGGGAAGATGTAC +
Preference number: 4 (lower is better)
Translates to: RRPQTLEELGLAVSSTDRLWVSE*MSGKMY
Trigger: GTACATCTTCCCTGACATTCATTCAGAAACCCATAA...TCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR GCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTACAAATTGGAACTGCTaGTCTCGGCATTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTTNWNC*SRHCCC
Trigger: ACAGCAGCAATGCCGAGAGCAGCAGTTCCAATTTGT...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR GCA 90 bp TCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATTCACAGCTGCCTCAGAACAAATTGGAACTaGTGCTCTCGGCATTGCTGC +
Preference number: 4 (lower is better)
Translates to: SNISNRNSRQHRDIHSCLRTNWN*CSRHCC
Trigger: GCAGCAATGCCGAGAGCAGCAGTTCCAATTTGTTCT...GAGGCAGCTGTGAATGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTAGAACAAATTGGAACTaGTGCTCTCGGCATTGCTGC +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTRTNWN*CSRHCC
Trigger: GCAGCAATGCCGAGAGCAGCAGTTCCAATTTGTTCT...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR GCA 90 bp GAGCCTGGCCTGAGCATCAGTTCTGTTCTTTGCTTCAAGATCACCAAGGTAGATACTGGCTCATCATGTTaGACTTCATTAGCTCGATGG +
Preference number: 4 (lower is better)
Translates to: EPGLSISSVLCFKITKVDTGSSC*TSLARW
Trigger: CCATCGAGCTAATGAAGTGCAACATGATGAGCCAGT...ATCTACCTTGGTGATCTTGAAGCAAAGAACAGAACTGATGCTCAGGCCAGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp CTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAAACTGGCTCATCATGTTaGACTTCATTAGCTCGATGG +
Preference number: 4 (lower is better)
Translates to: LTRGSLDQDDLAALQAKETGSSC*TSLARW
Trigger: CCATCGAGCTAATGAAGTGCAACATGATGAGCCAGT...TTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR GCA 90 bp TCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTAAACGAAGGATTTGCTaGTTGAGGCTGTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SLDQDDLAALQAKEQQPFKRRIC*LRLCSF
Trigger: GAAGGAACACAGCCTCAAGCAGCAAATCCTTCGTTT...AAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR GCA 90 bp CACCTCATTTTAAGTGACAGTTACACCATGCACCAGAAACCCAGAGAAGTGAAGACTGGCAGAAGTACTTaGCCAGGTACTCACAGTACC +
Preference number: 4 (lower is better)
Translates to: HLILSDSYTMHQKPREVKTGRST*PGTHST
Trigger: GGTACTGTGAGTACCTGGGCAAGTACTTCTGCCAGT...CTTCACTTCTCTGGGTTTCTGGTGCATGGTGTAACTGTCACTTAAAATGAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp AGAATTCAATCCCAGAACAAAAATGATGCAGGCTTTAGTTCACAGAGCTGCCAGAGTCCTATTCTCTGCTaGTTCTCCTCGGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: RIQSQNKNDAGFSSQSCQSPILC*FSSGHS
Trigger: ACTGTGCCCCGAGGAGAAGCAGCAGAGAATAGGACT...CTGGCAGCTCTGTGAACTAAAGCCTGCATCATTTTTGTTCTGGGATTGAATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp CACCTCATTTTAAGTGACAGTTACACCATGCACCAGAAACCCAGAGAAGTGAAGATGGCATCAGGGACCTaGCTGAGCTTCAAAGATCAC +
Preference number: 4 (lower is better)
Translates to: HLILSDSYTMHQKPREVKMASGT*LSFKDH
Trigger: GTGATCTTTGAAGCTCAGGCAGGTCCCTGATGCCAT...CTTCACTTCTCTGGGTTTCTGGTGCATGGTGTAACTGTCACTTAAAATGAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGACAGAGGTTAGAAGCTaGATCAACTTAAGGAACATC +
Preference number: 4 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKTEVRS*INLRNI
Trigger: GATGTTCCTTAAGTTGATGCAGCTTCTAACCTCTGT...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp AAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTGACTGCCAGATAGTGGTAACTTaGAAAGTGCTTCCAAAACAT +
Preference number: 4 (lower is better)
Translates to: KLSVTTDSGPINLPTADCQIVVT*KVLPKH
Trigger: ATGTTTTGGAAGCACTTTGCAAGTTACCACTATCTG...GCAGTCAGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp AGTGGACGAAATGCCCATGACGTAGTCCTATTCTCTGCTGCTTCTCCTCGGGGCAAGAACACTATCACCTaGCTTCATTTAGAAGGAATT +
Preference number: 4 (lower is better)
Translates to: SGRNAHDVVLFSAASPRGKNTIT*LHLEGI
Trigger: AATTCCTTCTAAATGAAGGCAGGTGATAGTGTTCTT...GCCCCGAGGAGAAGCAGCAGAGAATAGGACTACGTCATGGGCATTTCGTCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp GCATCCTCTATGCTTCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACAAGACGTTGGGGCTGTTaGTTGATACCAAACCCTCCA +
Preference number: 4 (lower is better)
Translates to: ASSMLQIFQTGTPGNIGTRRWGC*LIPNPP
Trigger: TGGAGGGTTTGGTATCAACCAACAGCCCCAACGTCT...TGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGAAGCATAGAGGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp GCATCCTCTATGCTTCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACAGCTTTCTGGCAAACATaGACGCATCGATCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: ASSMLQIFQTGTPGNIGTAFWQT*THRSEP
Trigger: TGGCTCAGATCGATGCGTCCATGTTTGCCAGAAAGC...TGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGAAGCATAGAGGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTCTGAGCATAGCTGTTTaGAGGGGTGTATGTGGAACT +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTLSIAV*RGVCGT
Trigger: AGTTCCACATACACCCCTCCAAACAGCTATGCTCAG...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR CCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTTCAAAGGGGAATCCCTaGCTAGTGCAGAGACTGAAA +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTSKGNP*LVQRLK
Trigger: TTTCAGTCTCTGCACTAGCCAGGGATTCCCCTTTGA...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR CCA 90 bp TCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATTCACAGCTGCCTCGGAGCTCATTTCATTTaGGGTCAAAGGGGAATCCCT +
Preference number: 4 (lower is better)
Translates to: SNISNRNSRQHRDIHSCLGAHFI*GQRGIP
Trigger: AGGGATTCCCCTTTGACCCCAAATGAAATGAGCTCC...GAGGCAGCTGTGAATGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTGGAGCTCATTTCATTTaGGGTCAAAGGGGAATCCCT +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTGAHFI*GQRGIP
Trigger: AGGGATTCCCCTTTGACCCCAAATGAAATGAGCTCC...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR CCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTTGGAGGAGAACAAATTaGAACTGCTGCTCTCGGCAT +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTWRRTN*NCCSRH
Trigger: ATGCCGAGAGCAGCAGTTCCAATTTGTTCTCCTCCA...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR CCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTATGCTGGTATCCGAATaGGAGCGAATGTGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTMLVSE*ERMWLF
Trigger: GAAAAGCCACATTCGCTCCCATTCGGATACCAGCAT...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR CCA 90 bp AGAATTCAATCCCAGAACAAAAATGATGCAGGCTTTAGTTCACAGAGCTGCCAGATCTGGGCATTCTCGTaGCAGCACTGGCAGAAGTAC +
Preference number: 4 (lower is better)
Translates to: RIQSQNKNDAGFSSQSCQIWAFS*QHWQKY
Trigger: GTACTTCTGCCAGTGCTGCCACGAGAATGCCCAGAT...CTGGCAGCTCTGTGAACTAAAGCCTGCATCATTTTTGTTCTGGGATTGAATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp ACGAAAGCTCTAAATCCTTGGCAGAGAACGTCAAAAACAGCCTCATTTAAGTGGAAGCACCACAGCAGGTaGAAACGCAGTTCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: TKALNPWQRTSKTASFKWKHHSR*KRSSEH
Trigger: GTGCTCTGAACTGCGTTTCCACCTGCTGTGGTGCTT...CCACTTAAATGAGGCTGTTTTTGACGTTCTCTGCCAAGGATTTAGAGCTTTCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp CACCCTCAATGGGAGAAGGAATTAAACTCCACCTCCTGGGAGAATTTACGTATTATCATTGCAGGATTCTaGAGCTCCCCTGGAGGCAAT +
Preference number: 4 (lower is better)
Translates to: HPQWEKELNSTSWENLRIIIAGF*SSPGGN
Trigger: ATTGCCTCCAGGGGAGCTCCAGAATCCTGCAATGAT...AATACGTAAATTCTCCCAGGAGGTGGAGTTTAATTCCTTCTCCCATTGAGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CCA 90 bp ATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTCCAGTTCCCTTCGCTACCATCTTaGATTTCAAATTCATCAACC +
Preference number: 4 (lower is better)
Translates to: IRMIWLLSRLRNSSPFQFPSLPS*ISNSST
Trigger: GGTTGATGAATTTGAAATCCAAGATGGTAGCGAAGG...GAACTGGAAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR TCA 90 bp CACCCTCAATGGGAGAAGGAATTAAACTCCACCTCCTGGGAGAATTTACGTATTGAAGGATTTGCTGCTTaGGGCTGTGTTCCTTCTGAT +
Preference number: 4 (lower is better)
Translates to: HPQWEKELNSTSWENLRIEGFAA*GCVPSD
Trigger: ATCAGAAGGAACACAGCCTCAAGCAGCAAATCCTTC...AATACGTAAATTCTCCCAGGAGGTGGAGTTTAATTCCTTCTCCCATTGAGGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR TCA 90 bp TCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATTCACAGCTGCCTCGCTCAAAGGGAAAGATaGTGTCATCCTCATTCTGAC +
Preference number: 4 (lower is better)
Translates to: SNISNRNSRQHRDIHSCLAQRER*CHPHSD
Trigger: GTCAGAATGAGGATGACATCATCTTTCCCTTTGAGC...GAGGCAGCTGTGAATGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp CACCCTCAATGGGAGAAGGAATTAAACTCCACCTCCTGGGAGAATTTACGTATTGACAGCTTCCAGACTTaGAGCAGGCTTTATGGTAAC +
Preference number: 4 (lower is better)
Translates to: HPQWEKELNSTSWENLRIDSFQT*SRLYGN
Trigger: GTTACCATAAAGCCTGCTTCAAGTCTGGAAGCTGTC...AATACGTAAATTCTCCCAGGAGGTGGAGTTTAATTCCTTCTCCCATTGAGGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR TCA 90 bp GTTTACAAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTCAGAAGCTCCAGAACTaGAACAAAGGAAAATTGGAA +
Preference number: 4 (lower is better)
Translates to: VYKLSVTTDSGPINLPTAQKLQN*NKGKLE
Trigger: TTCCAATTTTCCTTTGTTTCAGTTCTGGAGCTTCTG...AGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTTGTAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR TCA 90 bp CACCTCATTTTAAGTGACAGTTACACCATGCACCAGAAACCCAGAGAAGTGAAGCCTTTGATCCTATGCTaGTGTGAAACAGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: HLILSDSYTMHQKPREVKPLILC*CETGRT
Trigger: TGTCCTGCCTGTTTCACATCAGCATAGGATCAAAGG...CTTCACTTCTCTGGGTTTCTGGTGCATGGTGTAACTGTCACTTAAAATGAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp TTCACAGCTGCCTCTGAGGTCTCTGAGGAGTCTAGGATAGTCAGGATTGTTCTGAAAATAAGTGACAAGTaGGGAGCCTATGAGACTGTT +
Preference number: 4 (lower is better)
Translates to: FTAASEVSEESRIVRIVLKISDK*GAYETV
Trigger: AACAGTCTCATAGGCTCCTCACTTGTCACTTATTTT...CAGAACAATCCTGACTATCCTAGACTCCTCAGAGACCTCAGAGGCAGCTGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGATTTTCAAACCTGGGTaGCTAATGGTTAGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKIFKPG*LMVRFL
Trigger: CAAAAACCTAACCATTAGTCACCCAGGTTTGAAAAT...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp CACCTCATTTTAAGTGACAGTTACACCATGCACCAGAAACCCAGAGAAGTGAAGAGGAAACGAAGGATTTaGTGCTTGAGGCTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: HLILSDSYTMHQKPREVKRKRRI*CLRLCS
Trigger: GGAACACAGCCTCAAGCAGCAAATCCTTCGTTTCCT...CTTCACTTCTCTGGGTTTCTGGTGCATGGTGTAACTGTCACTTAAAATGAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp GTTTACAAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTATGTTCAGATATACCTaGTTTACAGTGGACACATGC +
Preference number: 4 (lower is better)
Translates to: VYKLSVTTDSGPINLPTAMFRYT*FTVDTC
Trigger: GCATGTGTCCACTGTAAAGCAGGTATATCTGAACAT...AGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTTGTAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp CACCTCATTTTAAGTGACAGTTACACCATGCACCAGAAACCCAGAGAAGTGAAGGGGATTACAAGCACATaGCACCATGCCTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: HLILSDSYTMHQKPREVKGITST*HHAWLI
Trigger: AATTAGCCAGGCATGGTGGCATGTGCTTGTAATCCC...CTTCACTTCTCTGGGTTTCTGGTGCATGGTGTAACTGTCACTTAAAATGAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR GCA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGAAAAATACTCCACAATaGCACCATTCTAACAGAACC +
Preference number: 4 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKKNTPQ*HHSNRT
Trigger: GGTTCTGTTAGAATGGTGGCATTGTGGAGTATTTTT...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR GCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTCAGAACATCTCTTTCTaGCACCTGAAAAGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTQNISF*HLKSPH
Trigger: ATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR CCA 90 bp CACCTCATTTTAAGTGACAGTTACACCATGCACCAGAAACCCAGAGAAGTGAAGTGGAGGAGAACAAATTaGAACTGCTGCTCTCGGCAT +
Preference number: 4 (lower is better)
Translates to: HLILSDSYTMHQKPREVKWRRTN*NCCSRH
Trigger: ATGCCGAGAGCAGCAGTTCCAATTTGTTCTCCTCCA...CTTCACTTCTCTGGGTTTCTGGTGCATGGTGTAACTGTCACTTAAAATGAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp GCATCCTCTATGCTTCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATGGAGGAGAACAAATTaGAACTGCTGCTCTCGGCAT +
Preference number: 4 (lower is better)
Translates to: ASSMLQIFQTGTPGNIGTWRRTN*NCCSRH
Trigger: ATGCCGAGAGCAGCAGTTCCAATTTGTTCTCCTCCA...TGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGAAGCATAGAGGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp GCATCCTCTATGCTTCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACAATGCTGGTATCCGAATaGGAGCGAATGTGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: ASSMLQIFQTGTPGNIGTMLVSE*ERMWLF
Trigger: GAAAAGCCACATTCGCTCCCATTCGGATACCAGCAT...TGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGAAGCATAGAGGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp AGAAGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGACTGATGTCAGCATCTTaGATTTCAAATTCATCAACC +
Preference number: 4 (lower is better)
Translates to: RRPQTLEELGLAVSSTDRLMSAS*ISNSST
Trigger: GGTTGATGAATTTGAAATCCAAGATGCTGACATCAG...TCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp AAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTGACTGCTTTCCTCGTTGGGGCTaGATGAACATTAAAAATTAT +
Preference number: 4 (lower is better)
Translates to: KLSVTTDSGPINLPTADCFPRWG*MNIKNY
Trigger: ATAATTTTTAATGTTCATCCAGCCCCAACGAGGAAA...GCAGTCAGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp CCTCCCCTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTTTTCCTCGTTGGGGCTaGATGAACATTAAAAATTAT +
Preference number: 4 (lower is better)
Translates to: PPLTRGSLDQDDLAALQAFPRWG*MNIKNY
Trigger: ATAATTTTTAATGTTCATCCAGCCCCAACGAGGAAA...AGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAGGGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CCA 90 bp CACCTCATTTTAAGTGACAGTTACACCATGCACCAGAAACCCAGAGAAGTGAAGGAGAAGACATGCCCATaGGCAGAATTCAATCCCAGA +
Preference number: 4 (lower is better)
Translates to: HLILSDSYTMHQKPREVKEKTCP*AEFNPR
Trigger: TCTGGGATTGAATTCTGCCCATGGGCATGTCTTCTC...CTTCACTTCTCTGGGTTTCTGGTGCATGGTGTAACTGTCACTTAAAATGAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp TGTGGCCCCCAAAATACCCAAATAAGTGGACGAAATGCCCATGACGTAGTCCTATCTTCTAGCCCTACATaGCTTTCAGATCCCAACTTT +
Preference number: 4 (lower is better)
Translates to: CGPQNTQISGRNAHDVVLSSSPT*LSDPNF
Trigger: AAAGTTGGGATCTGAAAGCCATGTAGGGCTAGAAGA...TAGGACTACGTCATGGGCATTTCGTCCACTTATTTGGGTATTTTGGGGGCCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp GCATCCTCTATGCTTCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATTTAAGGGGAAATGTTaGGAGAGTTGCAGCGTAGAG +
Preference number: 4 (lower is better)
Translates to: ASSMLQIFQTGTPGNIGTFKGKC*ESCSVE
Trigger: CTCTACGCTGCAACTCTCTCAACATTTCCCCTTAAA...TGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGAAGCATAGAGGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp TCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATTCACAGCTGCCTCACTTCGCCTTATCATTaGAGGATTCTGCAATGGGAT +
Preference number: 4 (lower is better)
Translates to: SNISNRNSRQHRDIHSCLTSPYH*RILQWD
Trigger: ATCCCATTGCAGAATCCTGCAATGATAAGGCGAAGT...GAGGCAGCTGTGAATGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273582.9
CDS-3UTR GCA 90 bp GCATCCTCTATGCTTCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACAAAACGAAGGATTTGCTaGTTGAGGCTGTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: ASSMLQIFQTGTPGNIGTKRRIC*LRLCSF
Trigger: GAAGGAACACAGCCTCAAGCAGCAAATCCTTCGTTT...TGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGAAGCATAGAGGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp GCATCCTCTATGCTTCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACAGCACTGTTTATGTCCTaGACGTTGAAGAGAGGATCA +
Preference number: 4 (lower is better)
Translates to: ASSMLQIFQTGTPGNIGTALFMS*TLKRGS
Trigger: TGATCCTCTCTTCAACGTGCAGGACATAAACAGTGC...TGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGAAGCATAGAGGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR GCA 90 bp AGAATTCAATCCCAGAACAAAAATGATGCAGGCTTTAGTTCACAGAGCTGCCAGGAGAAAGATGCTAGCTaGTCACAGAAGTGGGAACTG +
Preference number: 4 (lower is better)
Translates to: RIQSQNKNDAGFSSQSCQEKDAS*SQKWEL
Trigger: CAGTTCCCACTTCTGTGAGCAGCTAGCATCTTTCTC...CTGGCAGCTCTGTGAACTAAAGCCTGCATCATTTTTGTTCTGGGATTGAATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp AGAATTCAATCCCAGAACAAAAATGATGCAGGCTTTAGTTCACAGAGCTGCCAGGTGATGAGCTCAGTGTaGCACTTACAGAGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: RIQSQNKNDAGFSSQSCQVMSSV*HLQRKL
Trigger: CAACTTCCTCTGTAAGTGGCACACTGAGCTCATCAC...CTGGCAGCTCTGTGAACTAAAGCCTGCATCATTTTTGTTCTGGGATTGAATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp ACGAAAGCTCTAAATCCTTGGCAGAGAACGTCAAAAACAGCCTCATTTAAGTGGATGCTGGTATCCGAATaGGAGCGAATGTGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: TKALNPWQRTSKTASFKWMLVSE*ERMWLF
Trigger: GAAAAGCCACATTCGCTCCCATTCGGATACCAGCAT...CCACTTAAATGAGGCTGTTTTTGACGTTCTCTGCCAAGGATTTAGAGCTTTCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp CACCCTCAATGGGAGAAGGAATTAAACTCCACCTCCTGGGAGAATTTACGTATTTTCTGCTTCAGCTCCTaGATCTCTCTATCACTGTCT +
Preference number: 4 (lower is better)
Translates to: HPQWEKELNSTSWENLRIFCFSS*ISLSLS
Trigger: AGACAGTGATAGAGAGATCCAGGAGCTGAAGCAGAA...AATACGTAAATTCTCCCAGGAGGTGGAGTTTAATTCCTTCTCCCATTGAGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CCA 90 bp GTTTACAAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTCTGATGTCAGCATCTTaGATTTCAAATTCATCAACC +
Preference number: 4 (lower is better)
Translates to: VYKLSVTTDSGPINLPTALMSAS*ISNSST
Trigger: GGTTGATGAATTTGAAATCCAAGATGCTGACATCAG...AGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTTGTAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp CACCTCATTTTAAGTGACAGTTACACCATGCACCAGAAACCCAGAGAAGTGAAGCTGGAAATCAAGCTTTaGCTTCCTGTGAACTACACC +
Preference number: 4 (lower is better)
Translates to: HLILSDSYTMHQKPREVKLEIKL*LPVNYT
Trigger: GGTGTAGTTCACAGGAAGCCAAAGCTTGATTTCCAG...CTTCACTTCTCTGGGTTTCTGGTGCATGGTGTAACTGTCACTTAAAATGAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR TCA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTCTGTGTAGAATTTTCTaGTATACTGTCTATCCCCGA +
Preference number: 4 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTLCRIF*YTVYPR
Trigger: TCGGGGATAGACAGTATATCAGAAAATTCTACACAG...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR TCA 90 bp TCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATTCACAGCTGCCTCAAAATAAGTGACAAGTaGGGAGCCTATGAGACTGTT +
Preference number: 4 (lower is better)
Translates to: SNISNRNSRQHRDIHSCLKISDK*GAYETV
Trigger: AACAGTCTCATAGGCTCCTCACTTGTCACTTATTTT...GAGGCAGCTGTGAATGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp AGAATTCAATCCCAGAACAAAAATGATGCAGGCTTTAGTTCACAGAGCTGCCAGTTTAAGGGGAAATGTTaGGAGAGTTGCAGCGTAGAG +
Preference number: 4 (lower is better)
Translates to: RIQSQNKNDAGFSSQSCQFKGKC*ESCSVE
Trigger: CTCTACGCTGCAACTCTCTCAACATTTCCCCTTAAA...CTGGCAGCTCTGTGAACTAAAGCCTGCATCATTTTTGTTCTGGGATTGAATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp TGTGGCCCCCAAAATACCCAAATAAGTGGACGAAATGCCCATGACGTAGTCCTAATTTTCAAACCTGGGTaGCTAATGGTTAGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: CGPQNTQISGRNAHDVVLIFKPG*LMVRFL
Trigger: CAAAAACCTAACCATTAGTCACCCAGGTTTGAAAAT...TAGGACTACGTCATGGGCATTTCGTCCACTTATTTGGGTATTTTGGGGGCCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp TGTGGCCCCCAAAATACCCAAATAAGTGGACGAAATGCCCATGACGTAGTCCTACTACACAGAGTTAAGTaGATAATTGGCATAAAGGCT +
Preference number: 4 (lower is better)
Translates to: CGPQNTQISGRNAHDVVLLHRVK*IIGIKA
Trigger: AGCCTTTATGCCAATTATGCACTTAACTCTGTGTAG...TAGGACTACGTCATGGGCATTTCGTCCACTTATTTGGGTATTTTGGGGGCCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp TCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATTCACAGCTGCCTCTTTACAGTGGACACATaGCATTTCTTGACAGTCAAG +
Preference number: 4 (lower is better)
Translates to: SNISNRNSRQHRDIHSCLFTVDT*HFLTVK
Trigger: CTTGACTGTCAAGAAATGGCATGTGTCCACTGTAAA...GAGGCAGCTGTGAATGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp CACCTCATTTTAAGTGACAGTTACACCATGCACCAGAAACCCAGAGAAGTGAAGACCTGGAGAAAGAGCTaGATGTGTCACCTTTTTGTT +
Preference number: 4 (lower is better)
Translates to: HLILSDSYTMHQKPREVKTWRKS*MCHLFV
Trigger: AACAAAAAGGTGACACATCCAGCTCTTTCTCCAGGT...CTTCACTTCTCTGGGTTTCTGGTGCATGGTGTAACTGTCACTTAAAATGAGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp CACCCTCAATGGGAGAAGGAATTAAACTCCACCTCCTGGGAGAATTTACGTATTACCTGGAGAAAGAGCTaGATGTGTCACCTTTTTGTT +
Preference number: 4 (lower is better)
Translates to: HPQWEKELNSTSWENLRITWRKS*MCHLFV
Trigger: AACAAAAAGGTGACACATCCAGCTCTTTCTCCAGGT...AATACGTAAATTCTCCCAGGAGGTGGAGTTTAATTCCTTCTCCCATTGAGGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CCA 90 bp TCTTTGTACTCTCAGCTCTGGCATGGTGTCTGGAACACGGAGGCATCTATAGATAAAGCTCTAAATCCTTaGCAGAGAACGTCAAAAACA +
Preference number: 4 (lower is better)
Translates to: SLYSQLWHGVWNTEASIDKALNP*QRTSKT
Trigger: TGTTTTTGACGTTCTCTGCCAAGGATTTAGAGCTTT...ATCTATAGATGCCTCCGTGTTCCAGACACCATGCCAGAGCTGAGAGTACAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296343.10
3UTR CAA 72 bp GGCATCTCTTTCCTTGTTTTCGAGACCTTGGCAATTTaGAGTAGGGTCAAGTGTTTTGTAGAAAGTTCCTCG +
Preference number: 4 (lower is better)
Translates to: GISFLVFETLAI*SRVKCFVESSS
Trigger: CGAGGAACTTTCTACAAAACACTTGACCCTACTCAAAATTGCCAAGGTCTCGAAAACAAGGAAAGAGATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR TCA 90 bp ACGAAAGCTCTAAATCCTTGGCAGAGAACGTCAAAAACAGCCTCATTTAAGTGGGGAGGATTATATCACTaGAGGCATAAGATTCAGAGG +
Preference number: 4 (lower is better)
Translates to: TKALNPWQRTSKTASFKWGGLYH*RHKIQR
Trigger: CCTCTGAATCTTATGCCTTCAGTGATATAATCCTCC...CCACTTAAATGAGGCTGTTTTTGACGTTCTCTGCCAAGGATTTAGAGCTTTCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273582.9
CDS-3UTR TCA 90 bp CACCTCATTTTAAGTGACAGTTACACCATGCACCAGAAACCCAGAGAAGTGAAGCAGAAGCTCCAGAACTaGAACAAAGGAAAATTGGAA +
Preference number: 4 (lower is better)
Translates to: HLILSDSYTMHQKPREVKQKLQN*NKGKLE
Trigger: TTCCAATTTTCCTTTGTTTCAGTTCTGGAGCTTCTG...CTTCACTTCTCTGGGTTTCTGGTGCATGGTGTAACTGTCACTTAAAATGAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR TCA 90 bp AGAATTCAATCCCAGAACAAAAATGATGCAGGCTTTAGTTCACAGAGCTGCCAGACAGTCAAGGCAGGCTaGCGAAAGACAGAATTTTAT +
Preference number: 4 (lower is better)
Translates to: RIQSQNKNDAGFSSQSCQTVKAG*RKTEFY
Trigger: ATAAAATTCTGTCTTTCGTCAGCCTGCCTTGACTGT...CTGGCAGCTCTGTGAACTAAAGCCTGCATCATTTTTGTTCTGGGATTGAATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp CACCCTCAATGGGAGAAGGAATTAAACTCCACCTCCTGGGAGAATTTACGTATTACAGAGGTTAGAAGCTaGATCAACTTAAGGAACATC +
Preference number: 4 (lower is better)
Translates to: HPQWEKELNSTSWENLRITEVRS*INLRNI
Trigger: GATGTTCCTTAAGTTGATGCAGCTTCTAACCTCTGT...AATACGTAAATTCTCCCAGGAGGTGGAGTTTAATTCCTTCTCCCATTGAGGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR GCA 90 bp GCATCCTCTATGCTTCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACAAACTATGAGAAGACATaGCCATGGGCAGAATTCAAT +
Preference number: 4 (lower is better)
Translates to: ASSMLQIFQTGTPGNIGTNYEKT*PWAEFN
Trigger: ATTGAATTCTGCCCATGGGCATGTCTTCTCATAGTT...TGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGAAGCATAGAGGATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR GCA 90 bp CACCCTCAATGGGAGAAGGAATTAAACTCCACCTCCTGGGAGAATTTACGTATTAACTATGAGAAGACATaGCCATGGGCAGAATTCAAT +
Preference number: 4 (lower is better)
Translates to: HPQWEKELNSTSWENLRINYEKT*PWAEFN
Trigger: ATTGAATTCTGCCCATGGGCATGTCTTCTCATAGTT...AATACGTAAATTCTCCCAGGAGGTGGAGTTTAATTCCTTCTCCCATTGAGGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR GCA 90 bp CACCTCATTTTAAGTGACAGTTACACCATGCACCAGAAACCCAGAGAAGTGAAGATGTTCAGATATACCTaGTTTACAGTGGACACATGC +
Preference number: 4 (lower is better)
Translates to: HLILSDSYTMHQKPREVKMFRYT*FTVDTC
Trigger: GCATGTGTCCACTGTAAAGCAGGTATATCTGAACAT...CTTCACTTCTCTGGGTTTCTGGTGCATGGTGTAACTGTCACTTAAAATGAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CCA 90 bp TGTGGCCCCCAAAATACCCAAATAAGTGGACGAAATGCCCATGACGTAGTCCTATTTCCTCGTTGGGGCTaGATGAACATTAAAAATTAT +
Preference number: 4 (lower is better)
Translates to: CGPQNTQISGRNAHDVVLFPRWG*MNIKNY
Trigger: ATAATTTTTAATGTTCATCCAGCCCCAACGAGGAAA...TAGGACTACGTCATGGGCATTTCGTCCACTTATTTGGGTATTTTGGGGGCCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CCA 90 bp CACCTCATTTTAAGTGACAGTTACACCATGCACCAGAAACCCAGAGAAGTGAAGTTAAACTCCACCTCCTaGGAGAATTTACGTATTTTG +
Preference number: 4 (lower is better)
Translates to: HLILSDSYTMHQKPREVKLNSTS*ENLRIL
Trigger: CAAAATACGTAAATTCTCCCAGGAGGTGGAGTTTAA...CTTCACTTCTCTGGGTTTCTGGTGCATGGTGTAACTGTCACTTAAAATGAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR GCA 90 bp AGAATTCAATCCCAGAACAAAAATGATGCAGGCTTTAGTTCACAGAGCTGCCAGATCATTGCAGGATTCTaGAATGGGATCTTCAACTAT +
Preference number: 4 (lower is better)
Translates to: RIQSQNKNDAGFSSQSCQIIAGF*NGIFNY
Trigger: ATAGTTGAAGATCCCATTGCAGAATCCTGCAATGAT...CTGGCAGCTCTGTGAACTAAAGCCTGCATCATTTTTGTTCTGGGATTGAATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273582.9
CDS-3UTR GCA 90 bp CACCCTCAATGGGAGAAGGAATTAAACTCCACCTCCTGGGAGAATTTACGTATTAAGTTCCTCGAATTTTaGTCCTGTGTTTATGTTGTT +
Preference number: 4 (lower is better)
Translates to: HPQWEKELNSTSWENLRIKFLEF*SCVYVV
Trigger: AACAACATAAACACAGGAGCAAAATTCGAGGAACTT...AATACGTAAATTCTCCCAGGAGGTGGAGTTTAATTCCTTCTCCCATTGAGGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CCA 90 bp GCATCCTCTATGCTTCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATTGAGAACAGAAGTTTaGGAACTTACTGGAAATCAA +
Preference number: 4 (lower is better)
Translates to: ASSMLQIFQTGTPGNIGTLRTEV*ELTGNQ
Trigger: TTGATTTCCAGTAAGTTCCCAAACTTCTGTTCTCAA...TGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGAAGCATAGAGGATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
3UTR CAA 72 bp AGAACAGAAGTTTGGGAACTTACTGGAAATCAAGCTTaGGCTTCCTGTGAACTACACCAGTTTGTAACAATG +
Preference number: 4 (lower is better)
Translates to: RTEVWELTGNQA*ASCELHQFVTM
Trigger: CATTGTTACAAACTGGTGTAGTTCACAGGAAGCCAAAGCTTGATTTCCAGTAAGTTCCCAAACTTCTGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
3UTR CAA 72 bp GAACGTCAAAAACAGCCTCATTTAAGTGGAAAATATTaGTCTTCCACTCTTCTGCTATGTCTTGAATCTTGT +
Preference number: 4 (lower is better)
Translates to: ERQKQPHLSGKY*SSTLLLCLESC
Trigger: ACAAGATTCAAGACATAGCAGAAGAGTGGAAGACAAATATTTTCCACTTAAATGAGGCTGTTTTTGACGTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS TCA 90 bp GCCTCCGAGCTCCATTCCCGCGCCCTCCGGCCGCATCCGGGGCGGTaGGGCCGCCTCTTCGCCCAAGAGAGGCGTCCCTGCCGCTTCGCC +
Preference number: 5 (lower is better)
Translates to: ASELHSRALRPHPGR*GRLFAQERRPCRFA
Trigger: GGCGAAGCGGCAGGGACGCCTCTCTTGGGCGAAGAGGCGGCCTCACCGCCCCGGATGCGGCCGGAGGGCGCGGGAATGGAGCTCGGAGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296343.10
ENST00000449205.1
ENST00000474214.2
CDS CCA 90 bp GGTGTGACCCGGCCCGGAGGGAGGGCTGCACGTGCTTTCTTCAGGTaGCCTCCAGGACGGCGGCTTCCAGGGCCAGCGCTTCCGCGGGCT +
Preference number: 5 (lower is better)
Translates to: GVTRPGGRAARAFFR*PPGRRLPGPALPRA
Trigger: AGCCCGCGGAAGCGCTGGCCCTGGAAGCCGCCGTCCTGGAGGCCACCTGAAGAAAGCACGTGCAGCCCTCCCTCCGGGCCGGGTCACACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS CCA 90 bp CGGGCTCCTCCTCGTAGTCTGACAGGTAAGACTCCAGGCTCTGCCTaGCCAGTGCCTCCCGCCGGGCCTGCAGCCGCTCGCAGCGCGGAC +
Preference number: 5 (lower is better)
Translates to: RAPPRSLTGKTPGSA*PVPPAGPAAARSAD
Trigger: GTCCGCGCTGCGAGCGGCTGCAGGCCCGGCGGGAGGCACTGGCCAGGCAGAGCCTGGAGTCTTACCTGTCAGACTACGAGGAGGAGCCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS TCA 90 bp GGCGGCTTCCAGGGCCAGCGCTTCCGCGGGCTCCTCCTCGTAGTCTaGCAGGTAAGACTCCAGGCTCTGCCTGGCCAGTGCCTCCCGCCG +
Preference number: 5 (lower is better)
Translates to: GGFQGQRFRGLLLVV*QVRLQALPGQCLPP
Trigger: CGGCGGGAGGCACTGGCCAGGCAGAGCCTGGAGTCTTACCTGTCAGACTACGAGGAGGAGCCCGCGGAAGCGCTGGCCCTGGAAGCCGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCGCCAGGAGGCGGGGGTaGTTCTGTTCCACTGCTTCC +
Preference number: 5 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGAARRRG*FCSTAS
Trigger: GGAAGCAGTGGAACAGAACAACCCCCGCCTCCTGGC...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS GCA 90 bp GGGAGCTGGGATGCAGCTGCAATCTACACTCGCAGGGGTCTGTCCTaGCTCCCGAGGCTGCGTTGCGGTGGGCGCGAAAGGCTCGTGTGT +
Preference number: 5 (lower is better)
Translates to: GSWDAAAIYTRRGLS*LPRLRCGGRERLVC
Trigger: ACACACGAGCCTTTCGCGCCCACCGCAACGCAGCCTCGGGAGGCAGGACAGACCCCTGCGAGTGTAGATTGCAGCTGCATCCCAGCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000467303.5
CDS GCA 90 bp AGCCACTCCAGCTCCGAGGCGGCTGGAAGCTGCATCCCCTCAAACTaGTTCAGGAGCCCCATGGCCACCGCCTCAGCAGACGTGGAGTGC +
Preference number: 5 (lower is better)
Translates to: SHSSSEAAGSCIPSN*FRSPMATASADVEC
Trigger: GCACTCCACGTCTGCTGAGGCGGTGGCCATGGGGCTCCTGAAGCAGTTTGAGGGGATGCAGCTTCCAGCCGCCTCGGAGCTGGAGTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
ENST00000471364.1
CDS-3UTR CAA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCCCTCGGGGGTCCAAGTaGCCAATGGCCAGGTACTCA +
Preference number: 5 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGAPRGSK*PMARYS
Trigger: TGAGTACCTGGCCATTGGCAACTTGGACCCCCGAGG...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCGTTCTTGGTGCGGATTaGCTGGCGCCGAAGGCGGAT +
Preference number: 5 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGAVLGAD*LAPKAD
Trigger: ATCCGCCTTCGGCGCCAGCAAATCCGCACCAAGAAC...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCATGGGGAGCAGGTTCTaGGTGCGGATTTGCTGGCGC +
Preference number: 5 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGAMGSRF*VRICWR
Trigger: GCGCCAGCAAATCCGCACCAAGAACCTGCTCCCCAT...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS GCA 90 bp TGCTGTGACTCTGACAGCTGGCAGTCCGGCCTCGGGGGTCCAAGTTaGCAATGGCCAGGTACTCAGGCCCCTCACTGGCATCACCTGGGG +
Preference number: 5 (lower is better)
Translates to: CCDSDSWQSGLGGPS*QWPGTQAPHWHHLG
Trigger: CCCCAGGTGATGCCAGTGAGGGGCCTGAGTACCTGGCCATTGGCAACTTGGACCCCCGAGGCCGGACTGCCAGCTGTCAGAGTCACAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
ENST00000449205.1
CDS GCA 90 bp TCATGCTCCGGGACAAGCCACTCCAGCTCCGAGGCGGCTGGAAGCTaGATCCCCTCAAACTGCTTCAGGAGCCCCATGGCCACCGCCTCA +
Preference number: 5 (lower is better)
Translates to: SCSGTSHSSSEAAGS*IPSNCFRSPMATAS
Trigger: TGAGGCGGTGGCCATGGGGCTCCTGAAGCAGTTTGAGGGGATGCAGCTTCCAGCCGCCTCGGAGCTGGAGTGGCTTGTCCCGGAGCATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
ENST00000471364.1
CDS TCA 90 bp GGTGGGGCGAGTCCTTCAAAGAGTGGCTCAGTTCTGCAACAGGTGTaGCCCGGCCCGGAGGGAGGGCTGCACGTGCTTTCTTCAGGTGGC +
Preference number: 5 (lower is better)
Translates to: GGASPSKSGSVLQQV*PGPEGGLHVLSSGG
Trigger: GCCACCTGAAGAAAGCACGTGCAGCCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCTTTGAAGGACTCGCCCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS CCA 90 bp CTACACTCGCAGGGGTCTGTCCTGCCTCCCGAGGCTGCGTTGCGGTaGGCGCGAAAGGCTCGTGTGTACCGAAGTATAGGGGACCTGTCT +
Preference number: 5 (lower is better)
Translates to: LHSQGSVLPPEAALR*ARKARVYRSIGDLS
Trigger: AGACAGGTCCCCTATACTTCGGTACACACGAGCCTTTCGCGCCCACCGCAACGCAGCCTCGGGAGGCAGGACAGACCCCTGCGAGTGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000467303.5
CDS CCA 90 bp AGGCGGCTGGAAGCTGCATCCCCTCAAACTGCTTCAGGAGCCCCATaGCCACCGCCTCAGCAGACGTGGAGTGCAGGAAGCAGTGGGAGA +
Preference number: 5 (lower is better)
Translates to: RRLEAASPQTASGAP*PPPQQTWSAGSSGR
Trigger: TCTCCCACTGCTTCCTGCACTCCACGTCTGCTGAGGCGGTGGCCATGGGGCTCCTGAAGCAGTTTGAGGGGATGCAGCTTCCAGCCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
ENST00000471364.1
CDS GCA 90 bp CAGCTGCAATCTACACTCGCAGGGGTCTGTCCTGCCTCCCGAGGCTaGGTTGCGGTGGGCGCGAAAGGCTCGTGTGTACCGAAGTATAGG +
Preference number: 5 (lower is better)
Translates to: QLQSTLAGVCPASRG*VAVGAKGSCVPKYR
Trigger: CCTATACTTCGGTACACACGAGCCTTTCGCGCCCACCGCAACGCAGCCTCGGGAGGCAGGACAGACCCCTGCGAGTGTAGATTGCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000467303.5
CDS-3UTR CAA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCGCTGAGCATAGCTGTTaGGAGGGGTGTATGTGGAAC +
Preference number: 5 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGAAEHSC*EGCMWN
Trigger: GTTCCACATACACCCCTCCAAACAGCTATGCTCAGC...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp TTCAAAGAGTGGCTCAGTTCTGCAACAGGTGTGACCCGGCCCGGAGGGAGGGCTGGGGCCCACTCCAAGTaGCCACGAACACGAATCCGC +
Preference number: 5 (lower is better)
Translates to: FKEWLSSATGVTRPGGRAGAHSK*PRTRIR
Trigger: GCGGATTCGTGTTCGTGGCAACTTGGAGTGGGCCCC...AGCCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCTTTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCGATGAAGCCTTTGGCTaGGCAGAGCATGCATCTCTC +
Preference number: 5 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGADEAFG*AEHASL
Trigger: GAGAGATGCATGCTCTGCCAAGCCAAAGGCTTCATC...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCAAGGCAAGTCAGATGTaGCGGAGAGGAAGACACCTC +
Preference number: 5 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGAKASQM*RRGRHL
Trigger: GAGGTGTCTTCCTCTCCGCAACATCTGACTTGCCTT...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS TCA 90 bp CCCGCCGGGCCTGCAGCCGCTCGCAGCGCGGACAGCTTCCAGACTTaGAGCAGGCTTTATGGTAACACGCTTTACACTCTTCACAGGTCC +
Preference number: 5 (lower is better)
Translates to: PAGPAAARSADSFQT*SRLYGNTLYTLHRS
Trigger: GGACCTGTGAAGAGTGTAAAGCGTGTTACCATAAAGCCTGCTTCAAGTCTGGAAGCTGTCCGCGCTGCGAGCGGCTGCAGGCCCGGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS GCA 90 bp GGGAGCTGCTGGAGGAGAACAAATTGGAACTGCTGCTCTCGGCATTaGTGCTGTGACTCTGACAGCTGGCAGTCCGGCCTCGGGGGTCCA +
Preference number: 5 (lower is better)
Translates to: GSCWRRTNWNCCSRH*CCDSDSWQSGLGGP
Trigger: TGGACCCCCGAGGCCGGACTGCCAGCTGTCAGAGTCACAGCAGCAATGCCGAGAGCAGCAGTTCCAATTTGTTCTCCTCCAGCAGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
ENST00000449205.1
CDS CCA 90 bp CCTCAAACTGCTTCAGGAGCCCCATGGCCACCGCCTCAGCAGACGTaGAGTGCAGGAAGCAGTGGGAGAAGGACTGGGAGGAAACGAAGG +
Preference number: 5 (lower is better)
Translates to: PQTASGAPWPPPQQT*SAGSSGRRTGRKRR
Trigger: CCTTCGTTTCCTCCCAGTCCTTCTCCCACTGCTTCCTGCACTCCACGTCTGCTGAGGCGGTGGCCATGGGGCTCCTGAAGCAGTTTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
ENST00000471364.1
CDS-3UTR CAA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCTACTTAGACCAGACGTaGGGGCTGTTGGTTGATACC +
Preference number: 5 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGAYLDQT*GLLVDT
Trigger: GGTATCAACCAACAGCCCCAACGTCTGGTCTAAGTA...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp CAGGACAGGGAGAGGGAAAACGCCATCCCCGTTTCAGCAGCAGGAGAGGTGGTTGCCAGGAGGCGGGGGTaGTTCTGTTCCACTGCTTCC +
Preference number: 5 (lower is better)
Translates to: QDRERENAIPVSAAGEVVARRRG*FCSTAS
Trigger: GGAAGCAGTGGAACAGAACAACCCCCGCCTCCTGGC...AACCACCTCTCCTGCTGCTGAAACGGGGATGGCGTTTTCCCTCTCCCTGTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp AGGGGGCCGACCGCTCCTCTGAGTAAGCGCTCCTTCAGCGACAGAGCTGGCGCCGAGGAAACGAAGGATTaGCTGCTTGAGGCTGTGTTC +
Preference number: 5 (lower is better)
Translates to: RGPTAPLSKRSFSDRAGAEETKD*LLEAVF
Trigger: GAACACAGCCTCAAGCAGCAAATCCTTCGTTTCCTC...GGCGCCAGCTCTGTCGCTGAAGGAGCGCTTACTCAGAGGAGCGGTCGGCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp CAGGACAGGGAGAGGGAAAACGCCATCCCCGTTTCAGCAGCAGGAGAGGTGGTTTTGCTGAAGTCCCACTaGCGCAGAACCCGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: QDRERENAIPVSAAGEVVLLKSH*RRTRLG
Trigger: CCCCAGCCGGGTTCTGCGCAAGTGGGACTTCAGCAA...AACCACCTCTCCTGCTGCTGAAACGGGGATGGCGTTTTCCCTCTCCCTGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp TTCAAAGAGTGGCTCAGTTCTGCAACAGGTGTGACCCGGCCCGGAGGGAGGGCTGCGCCTCACGTATGCTaGCGGCGTAAGGCTACAGGT +
Preference number: 5 (lower is better)
Translates to: FKEWLSSATGVTRPGGRAAPHVC*RRKATG
Trigger: ACCTGTAGCCTTACGCCGCAAGCATACGTGAGGCGC...AGCCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCTTTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS GCA 90 bp AGCTTCCGTGCTCAGCCTCCTGGTACATGGGGAGCAGGTTCTTGGTaGGGATTTGCTGGCGCCGAAGGCGGATCTTCTGCTTCAGCTCCT +
Preference number: 5 (lower is better)
Translates to: SFRAQPPGTWGAGSW*GFAGAEGGSSASAP
Trigger: AGGAGCTGAAGCAGAAGATCCGCCTTCGGCGCCAGCAAATCCGCACCAAGAACCTGCTCCCCATGTACCAGGAGGCTGAGCACGGAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
CDS-3UTR CAA 90 bp CAAGACGGCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGGTGCCCTCTGCTTTCTaGAGGTTTCCGGGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: QDGTSVLQRSDLEKELDVVPSAF*RFPGRA
Trigger: GGCCCTCCCCGGAAACCTCAAGAAAGCAGAGGGCAC...CACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGCCGTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS GCA 90 bp AGCTGCTGGAGGAGAACAAATTGGAACTGCTGCTCTCGGCATTGCTaGTGTGACTCTGACAGCTGGCAGTCCGGCCTCGGGGGTCCAAGT +
Preference number: 5 (lower is better)
Translates to: SCWRRTNWNCCSRHC*CDSDSWQSGLGGPS
Trigger: ACTTGGACCCCCGAGGCCGGACTGCCAGCTGTCAGAGTCACAGCAGCAATGCCGAGAGCAGCAGTTCCAATTTGTTCTCCTCCAGCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
ENST00000449205.1
CDS GCA 90 bp GAGCGAATGTGGCTTTTCTTTGCCCCACTGGTGACAGTGAGTGTCTaGCCCTCTGAGAAGCTGGACCTGCGGAGGACACTGGACAGCTGG +
Preference number: 5 (lower is better)
Translates to: ERMWLFFAPLVTVSV*PSEKLDLRRTLDSW
Trigger: CCAGCTGTCCAGTGTCCTCCGCAGGTCCAGCTTCTCAGAGGGGCAGACACTCACTGTCACCAGTGGGGCAAAGAAAAGCCACATTCGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
ENST00000447048.1
ENST00000449205.1
CDS GCA 90 bp TGCTCAGCCTCCTGGTACATGGGGAGCAGGTTCTTGGTGCGGATTTaGTGGCGCCGAAGGCGGATCTTCTGCTTCAGCTCCTGGATCTCT +
Preference number: 5 (lower is better)
Translates to: CSASWYMGSRFLVRI*WRRRRIFCFSSWIS
Trigger: AGAGATCCAGGAGCTGAAGCAGAAGATCCGCCTTCGGCGCCAGCAAATCCGCACCAAGAACCTGCTCCCCATGTACCAGGAGGCTGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
CDS CCA 90 bp CTGTTTGGAGGGGTGTATGTGGAACTGGGCAGGGCTGTCAGGCTCTaGCTCTTTGTCACCAGGAGCGGGCTCTCGTGCTTTCTGGCAAAC +
Preference number: 5 (lower is better)
Translates to: LFGGVYVELGRAVRL*LFVTRSGLSCFLAN
Trigger: GTTTGCCAGAAAGCACGAGAGCCCGCTCCTGGTGACAAAGAGCCAGAGCCTGACAGCCCTGCCCAGTTCCACATACACCCCTCCAAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000449205.1
ENST00000467303.5
CDS CCA 90 bp CAAGTTGCCAATGGCCAGGTACTCAGGCCCCTCACTGGCATCACCTaGGGAATCATTCTGGCTGCTGACCCAGGATGCCTCTATGGGGCT +
Preference number: 5 (lower is better)
Translates to: QVANGQVLRPLTGIT*GIILAADPGCLYGA
Trigger: AGCCCCATAGAGGCATCCTGGGTCAGCAGCCAGAATGATTCCCCAGGTGATGCCAGTGAGGGGCCTGAGTACCTGGCCATTGGCAACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
ENST00000449205.1
CDS CCA 90 bp GAAAGCTTCCGTGCTCAGCCTCCTGGTACATGGGGAGCAGGTTCTTaGTGCGGATTTGCTGGCGCCGAAGGCGGATCTTCTGCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: ESFRAQPPGTWGAGS*CGFAGAEGGSSASA
Trigger: AGCTGAAGCAGAAGATCCGCCTTCGGCGCCAGCAAATCCGCACCAAGAACCTGCTCCCCATGTACCAGGAGGCTGAGCACGGAAGCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
CDS-3UTR CAA 90 bp CAGCAGCAGGAGAGGTGGTTGAGAAAGGCCTGGCTCAGAAGCTCCAGAACTGAAGTGCCCTCTGCTTTCTaGAGGTTTCCGGGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: QQQERWLRKAWLRSSRTEVPSAF*RFPGRA
Trigger: GGCCCTCCCCGGAAACCTCAAGAAAGCAGAGGGCAC...TTCAGTTCTGGAGCTTCTGAGCCAGGCCTTTCTCAACCACCTCTCCTGCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp ATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTCCAGTTCCTCTCCCAGGTGCCCTCTGCTTTCTaGAGGTTTCCGGGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: IWLLSRLRNSSPFQFLSQVPSAF*RFPGRA
Trigger: GGCCCTCCCCGGAAACCTCAAGAAAGCAGAGGGCAC...CTGGGAGAGGAACTGGAAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CAA 90 bp CAAGACGGCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGCCTCGGGGGTCCAAGTaGCCAATGGCCAGGTACTCA +
Preference number: 5 (lower is better)
Translates to: QDGTSVLQRSDLEKELDVPRGSK*PMARYS
Trigger: TGAGTACCTGGCCATTGGCAACTTGGACCCCCGAGG...CACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGCCGTCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp CTAAGAGGGGAGGTAGAGGTGGTCACAATCCCGCCCCTCATGCCACAGTGTGCTCCGCAGCAGCCGGACTaGATTGAGCAGCTTGACCTT +
Preference number: 5 (lower is better)
Translates to: LRGEVEVVTIPPLMPQCAPQQPD*IEQLDL
Trigger: AAGGTCAAGCTGCTCAATCAAGTCCGGCTGCTGCGG...AGCACACTGTGGCATGAGGGGCGGGATTGTGACCACCTCTACCTCCCCTCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS TCA 90 bp AACCTCATCAGCAGAGCCAGAGTCAGAGAGCTGTGCCGAATCACGTaGGCTGAACTGGGAGCTGCTGGAGGTGACCCGAAAGCTTCCGTG +
Preference number: 5 (lower is better)
Translates to: NLISRARVRELCRIT*AELGAAGGDPKASV
Trigger: CACGGAAGCTTTCGGGTCACCTCCAGCAGCTCCCAGTTCAGCTCACGTGATTCGGCACAGCTCTCTGACTCTGGCTCTGCTGATGAGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
CDS GCA 90 bp TTTGGAGTTAAGGTGACGCAGGAACCGTCACTGCAGCGTTTGCTTTaGGTTCAGATGCGGCAGCTCAGCGCAGCTGTAGGTGGAGGAGCG +
Preference number: 5 (lower is better)
Translates to: FGVKVTQEPSLQRLL*VQMRQLSAAVGGGA
Trigger: CGCTCCTCCACCTACAGCTGCGCTGAGCTGCCGCATCTGAACGCAAAGCAAACGCTGCAGTGACGGTTCCTGCGTCACCTTAACTCCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000467303.5
CDS CCA 90 bp AGTAGGAATGCTGAGCATAGCTGTTTGGAGGGGTGTATGTGGAACTaGGCAGGGCTGTCAGGCTCTGGCTCTTTGTCACCAGGAGCGGGC +
Preference number: 5 (lower is better)
Translates to: SRNAEHSCLEGCMWN*AGLSGSGSLSPGAG
Trigger: GCCCGCTCCTGGTGACAAAGAGCCAGAGCCTGACAGCCCTGCCCAGTTCCACATACACCCCTCCAAACAGCTATGCTCAGCATTCCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000449205.1
ENST00000467303.5
CDS CCA 90 bp TCAGCCTCCTGGTACATGGGGAGCAGGTTCTTGGTGCGGATTTGCTaGCGCCGAAGGCGGATCTTCTGCTTCAGCTCCTGGATCTCTCTA +
Preference number: 5 (lower is better)
Translates to: SASWYMGSRFLVRIC*RRRRIFCFSSWISL
Trigger: TAGAGAGATCCAGGAGCTGAAGCAGAAGATCCGCCTTCGGCGCCAGCAAATCCGCACCAAGAACCTGCTCCCCATGTACCAGGAGGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
CDS CCA 90 bp AGCTCCCCCTTCCTGGTCGCAGTCAGGTCATTCAGTGAGTACAGGTaGAGGTCCTCTGTCAGGTGGCCTGGGACTGTGTCAAAGGAATCC +
Preference number: 5 (lower is better)
Translates to: SSPFLVAVRSFSEYR*RSSVRWPGTVSKES
Trigger: GGATTCCTTTGACACAGTCCCAGGCCACCTGACAGAGGACCTCCACCTGTACTCACTGAATGACCTGACTGCGACCAGGAAGGGGGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
CDS-3UTR CAA 90 bp AGGTGGAAACGCAGTTCAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGTCAGGCTCTGGCTCTTaGTCACCAGGAGCGGGCTCT +
Preference number: 5 (lower is better)
Translates to: RWKRSSEHGRHTRNISTKSGSGS*SPGAGS
Trigger: AGAGCCCGCTCCTGGTGACAAAGAGCCAGAGCCTGA...CTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTGAACTGCGTTTCCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp TTCAAAGAGTGGCTCAGTTCTGCAACAGGTGTGACCCGGCCCGGAGGGAGGGCTGCTGAGCATAGCTGTTaGGAGGGGTGTATGTGGAAC +
Preference number: 5 (lower is better)
Translates to: FKEWLSSATGVTRPGGRAAEHSC*EGCMWN
Trigger: GTTCCACATACACCCCTCCAAACAGCTATGCTCAGC...AGCCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCTTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp CAGGACAGGGAGAGGGAAAACGCCATCCCCGTTTCAGCAGCAGGAGAGGTGGTTCTTCTCTCTGAGCCATaGTTGGGCACGGATTGGTGG +
Preference number: 5 (lower is better)
Translates to: QDRERENAIPVSAAGEVVLLSEP*LGTDWW
Trigger: CCACCAATCCGTGCCCAACAATGGCTCAGAGAGAAG...AACCACCTCTCCTGCTGCTGAAACGGGGATGGCGTTTTCCCTCTCCCTGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp AAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTGACTGCGTGCCCTCTGCTTTCTaGAGGTTTCCGGGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: KLSVTTDSGPINLPTADCVPSAF*RFPGRA
Trigger: GGCCCTCCCCGGAAACCTCAAGAAAGCAGAGGGCAC...GCAGTCAGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp TTCCACCAACCACAGGCAACTTTCCGCTCAGCTTCCAGGGCAGCACCCACGCCCTGGAGCTCATTTCATTaGGGGTCAAAGGGGAATCCC +
Preference number: 5 (lower is better)
Translates to: FHQPQATFRSASRAAPTPWSSFH*GSKGNP
Trigger: GGGATTCCCCTTTGACCCCAAATGAAATGAGCTCCA...GGGCGTGGGTGCTGCCCTGGAAGCTGAGCGGAAAGTTGCCTGTGGTTGGTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp TTCAAAGAGTGGCTCAGTTCTGCAACAGGTGTGACCCGGCCCGGAGGGAGGGCTGCTGACTTCACTGCTTaGACCAGAGTAGGGCAAAGG +
Preference number: 5 (lower is better)
Translates to: FKEWLSSATGVTRPGGRAADFTA*TRVGQR
Trigger: CCTTTGCCCTACTCTGGTCAAAGCAGTGAAGTCAGC...AGCCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCTTTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp GCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGTCACCTTGTTCTTGGTGCGGATTaGCTGGCGCCGAAGGCGGAT +
Preference number: 5 (lower is better)
Translates to: AHLSSSAVTWRKSWMCHLVLGAD*LAPKAD
Trigger: ATCCGCCTTCGGCGCCAGCAAATCCGCACCAAGAAC...AAGGTGACACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp AGTGGACGAAATGCCCATGACGTAGTCCTATTCTCTGCTGCTTCTCCTCGGGGCATGGGGAGCAGGTTCTaGGTGCGGATTTGCTGGCGC +
Preference number: 5 (lower is better)
Translates to: SGRNAHDVVLFSAASPRGMGSRF*VRICWR
Trigger: GCGCCAGCAAATCCGCACCAAGAACCTGCTCCCCAT...GCCCCGAGGAGAAGCAGCAGAGAATAGGACTACGTCATGGGCATTTCGTCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp ATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTCCAGTTCCTCTCCCAGATGGGGAGCAGGTTCTaGGTGCGGATTTGCTGGCGC +
Preference number: 5 (lower is better)
Translates to: IWLLSRLRNSSPFQFLSQMGSRF*VRICWR
Trigger: GCGCCAGCAAATCCGCACCAAGAACCTGCTCCCCAT...CTGGGAGAGGAACTGGAAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CAA 90 bp CAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGACTCGCACTCCTTTTATTGCTGAAGTCCCACTaGCGCAGAACCCGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: QSTGGTHGTSLLRLALLLLLKSH*RRTRLG
Trigger: CCCCAGCCGGGTTCTGCGCAAGTGGGACTTCAGCAA...TAAAAGGAGTGCGAGTCTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp CTAAGAGGGGAGGTAGAGGTGGTCACAATCCCGCCCCTCATGCCACAGTGTGCTGAATCCAGAAGCTCCTaGGCCAGTCGGCAAGTCTTG +
Preference number: 5 (lower is better)
Translates to: LRGEVEVVTIPPLMPQCAESRSS*ASRQVL
Trigger: CAAGACTTGCCGACTGGCCAAGGAGCTTCTGGATTC...AGCACACTGTGGCATGAGGGGCGGGATTGTGACCACCTCTACCTCCCCTCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CAA 90 bp TTCAAAGAGTGGCTCAGTTCTGCAACAGGTGTGACCCGGCCCGGAGGGAGGGCTCACTACTGCAGAGACTaGGTGAGCACTAAGAGGGGA +
Preference number: 5 (lower is better)
Translates to: FKEWLSSATGVTRPGGRAHYCRD*VSTKRG
Trigger: TCCCCTCTTAGTGCTCACCAAGTCTCTGCAGTAGTG...AGCCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCTTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS GCA 90 bp CCTGGTCCCCTAAGGAAGAGGCAGCAGAATCTGGCTTCTGGGAGCTaGTGGAGGAGAACAAATTGGAACTGCTGCTCTCGGCATTGCTGC +
Preference number: 5 (lower is better)
Translates to: PGPLRKRQQNLASGS*WRRTNWNCCSRHCC
Trigger: GCAGCAATGCCGAGAGCAGCAGTTCCAATTTGTTCTCCTCCAGCAGCTCCCAGAAGCCAGATTCTGCTGCCTCTTCCTTAGGGGACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
ENST00000449205.1
CDS-3UTR CAA 90 bp AGGTGGAAACGCAGTTCAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGCGTTGGGGCTGTTGGTaGATACCAAACCCTCCACCG +
Preference number: 5 (lower is better)
Translates to: RWKRSSEHGRHTRNISTKRWGCW*IPNPPP
Trigger: CGGTGGAGGGTTTGGTATCAACCAACAGCCCCAACG...CTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTGAACTGCGTTTCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp CAGGACAGGGAGAGGGAAAACGCCATCCCCGTTTCAGCAGCAGGAGAGGTGGTTATTGTTGGGCACGGATaGGTGGAGGCTAGAGAAGGA +
Preference number: 5 (lower is better)
Translates to: QDRERENAIPVSAAGEVVIVGHG*VEAREG
Trigger: TCCTTCTCTAGCCTCCACCAATCCGTGCCCAACAAT...AACCACCTCTCCTGCTGCTGAAACGGGGATGGCGTTTTCCCTCTCCCTGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp GCCACCGTGCCTGGCCAACACTTCTTGAGTGAAAGTCTACTCGGTCTTGCCCGGGCTGACTTCACTGCTTaGACCAGAGTAGGGCAAAGG +
Preference number: 5 (lower is better)
Translates to: ATVPGQHFLSESLLGLARADFTA*TRVGQR
Trigger: CCTTTGCCCTACTCTGGTCAAAGCAGTGAAGTCAGC...CCGGGCAAGACCGAGTAGACTTTCACTCAAGAAGTGTTGGCCAGGCACGGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CAA 90 bp CAGGACAGGGAGAGGGAAAACGCCATCCCCGTTTCAGCAGCAGGAGAGGTGGTTACAGCTGCCGAAGTCTaGCTCAGAGAGGTAGCTGAT +
Preference number: 5 (lower is better)
Translates to: QDRERENAIPVSAAGEVVTAAEV*LREVAD
Trigger: ATCAGCTACCTCTCTGAGCAAGACTTCGGCAGCTGT...AACCACCTCTCCTGCTGCTGAAACGGGGATGGCGTTTTCCCTCTCCCTGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp ATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTCCAGTTCGGGGCCCACTCCAAGTaGCCACGAACACGAATCCGC +
Preference number: 5 (lower is better)
Translates to: IRMIWLLSRLRNSSPFQFGAHSK*PRTRIR
Trigger: GCGGATTCGTGTTCGTGGCAACTTGGAGTGGGCCCC...GAACTGGAAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CAA 90 bp CAGGACAGGGAGAGGGAAAACGCCATCCCCGTTTCAGCAGCAGGAGAGGTGGTTCACTGGCAGAAGTACTaGCCCAGGTACTCACAGTAC +
Preference number: 5 (lower is better)
Translates to: QDRERENAIPVSAAGEVVHWQKY*PRYSQY
Trigger: GTACTGTGAGTACCTGGGCAAGTACTTCTGCCAGTG...AACCACCTCTCCTGCTGCTGAAACGGGGATGGCGTTTTCCCTCTCCCTGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp CAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGACTCGCACTCCTTTTATGCAATGGAGCAAGCTaGGCTCACTGCAGCCCTCGC +
Preference number: 5 (lower is better)
Translates to: QSTGGTHGTSLLRLALLLCNGAS*AHCSPR
Trigger: GCGAGGGCTGCAGTGAGCCAAGCTTGCTCCATTGCA...TAAAAGGAGTGCGAGTCTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS TCA 90 bp TGTCTGCAGCAGGAGGGACTCGAAGGACACGGAGGATTATATCACTaGAGGCATAAGATTCAGAGGTGCCCGCGGTCTAGCATCCCCCAG +
Preference number: 5 (lower is better)
Translates to: CLQQEGLEGHGGLYH*RHKIQRCPRSSIPQ
Trigger: CTGGGGGATGCTAGACCGCGGGCACCTCTGAATCTTATGCCTTCAGTGATATAATCCTCCGTGTCCTTCGAGTCCCTCCTGCTGCAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000467303.5
CDS TCA 90 bp AACCTCATCAGCAGAGCCAGAGTCAGAGAGCTGTGCCGAATCACGTaGGCTGAACTGGGAGCTGCTGGAGGTGACCCGAAAGCCTGTTAT +
Preference number: 5 (lower is better)
Translates to: NLISRARVRELCRIT*AELGAAGGDPKACY
Trigger: ATAACAGGCTTTCGGGTCACCTCCAGCAGCTCCCAGTTCAGCTCACGTGATTCGGCACAGCTCTCTGACTCTGGCTCTGCTGATGAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471364.1
CDS GCA 90 bp GTGGGCGCGAAAGGCTCGTGTGTACCGAAGTATAGGGGACCTGTCTaGAGCAGGAGGGACTCGAAGGACACGGAGGATTATATCACTGAA +
Preference number: 5 (lower is better)
Translates to: VGAKGSCVPKYRGPV*SRRDSKDTEDYITE
Trigger: TTCAGTGATATAATCCTCCGTGTCCTTCGAGTCCCTCCTGCTGCAGACAGGTCCCCTATACTTCGGTACACACGAGCCTTTCGCGCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000467303.5
CDS GCA 90 bp CCGCAGTCGCTTGATGTAATCAGGGTCAGTCCGGATGCCACATCCTaGACAGCGGTAATTCTGCTTGGCCACGGCAATTTTCCTCGTTGG +
Preference number: 5 (lower is better)
Translates to: PQSLDVIRVSPDATS*TAVILLGHGNFPRW
Trigger: CCAACGAGGAAAATTGCCGTGGCCAAGCAGAATTACCGCTGTGCAGGATGTGGCATCCGGACTGACCCTGATTACATCAAGCGACTGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
CDS CCA 90 bp GGTCCCCTAAGGAAGAGGCAGCAGAATCTGGCTTCTGGGAGCTGCTaGAGGAGAACAAATTGGAACTGCTGCTCTCGGCATTGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: GPLRKRQQNLASGSC*RRTNWNCCSRHCCC
Trigger: ACAGCAGCAATGCCGAGAGCAGCAGTTCCAATTTGTTCTCCTCCAGCAGCTCCCAGAAGCCAGATTCTGCTGCCTCTTCCTTAGGGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
ENST00000449205.1
CDS CCA 90 bp GCAGTCAGGTCATTCAGTGAGTACAGGTGGAGGTCCTCTGTCAGGTaGCCTGGGACTGTGTCAAAGGAATCCAGAAGCTCCTTGGCCAGT +
Preference number: 5 (lower is better)
Translates to: AVRSFSEYRWRSSVR*PGTVSKESRSSLAS
Trigger: ACTGGCCAAGGAGCTTCTGGATTCCTTTGACACAGTCCCAGGCCACCTGACAGAGGACCTCCACCTGTACTCACTGAATGACCTGACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
CDS-3UTR CAA 90 bp GCATCCTCTATGCTTCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACACCTCCCGAGGCTGCGTaGCGGTGGGCGCGAAAGGCT +
Preference number: 5 (lower is better)
Translates to: ASSMLQIFQTGTPGNIGTPPEAA*RWARKA
Trigger: AGCCTTTCGCGCCCACCGCAACGCAGCCTCGGGAGG...TGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGAAGCATAGAGGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273582.9
CDS-3UTR CAA 90 bp AGGTGGAAACGCAGTTCAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGCAGACGTTGGGGCTGTaGGTTGATACCAAACCCTCC +
Preference number: 5 (lower is better)
Translates to: RWKRSSEHGRHTRNISTKQTLGL*VDTKPS
Trigger: GGAGGGTTTGGTATCAACCAACAGCCCCAACGTCTG...CTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTGAACTGCGTTTCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp AGAAGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGATCAGGCTCTGGCTCTTaGTCACCAGGAGCGGGCTCT +
Preference number: 5 (lower is better)
Translates to: RRPQTLEELGLAVSSTDRSGSGS*SPGAGS
Trigger: AGAGCCCGCTCCTGGTGACAAAGAGCCAGAGCCTGA...TCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp CAAGACGGCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGGCTGAGCATAGCTGTTaGGAGGGGTGTATGTGGAAC +
Preference number: 5 (lower is better)
Translates to: QDGTSVLQRSDLEKELDVAEHSC*EGCMWN
Trigger: GTTCCACATACACCCCTCCAAACAGCTATGCTCAGC...CACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGCCGTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp CAAGACGGCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGCTGGAGGAGAACAAATaGGAACTGCTGCTCTCGGCA +
Preference number: 5 (lower is better)
Translates to: QDGTSVLQRSDLEKELDVLEENK*ELLLSA
Trigger: TGCCGAGAGCAGCAGTTCCAATTTGTTCTCCTCCAG...CACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGCCGTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGGTTCTTGGTGCGGATTaGCTGGCGCCGAAGGCGGAT +
Preference number: 5 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKVLGAD*LAPKAD
Trigger: ATCCGCCTTCGGCGCCAGCAAATCCGCACCAAGAAC...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp CCCCTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGTTCTTGGTGCGGATTaGCTGGCGCCGAAGGCGGAT +
Preference number: 5 (lower is better)
Translates to: PLTRGSLDQDDLAALQAKVLGAD*LAPKAD
Trigger: ATCCGCCTTCGGCGCCAGCAAATCCGCACCAAGAAC...CTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CAA 90 bp AAGGGGAGAGAACGGAGTCGGGTTGTACTTTTACTCAGAAGCACAACGACCATCGGGGCCCACTCCAAGTaGCCACGAACACGAATCCGC +
Preference number: 5 (lower is better)
Translates to: KGRERSRVVLLLRSTTTIGAHSK*PRTRIR
Trigger: GCGGATTCGTGTTCGTGGCAACTTGGAGTGGGCCCC...GATGGTCGTTGTGCTTCTGAGTAAAAGTACAACCCGACTCCGTTCTCTCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp CAGCAGCAGGAGAGGTGGTTGAGAAAGGCCTGGCTCAGAAGCTCCAGAACTGAAGAATCCAGAAGCTCCTaGGCCAGTCGGCAAGTCTTG +
Preference number: 5 (lower is better)
Translates to: QQQERWLRKAWLRSSRTEESRSS*ASRQVL
Trigger: CAAGACTTGCCGACTGGCCAAGGAGCTTCTGGATTC...TTCAGTTCTGGAGCTTCTGAGCCAGGCCTTTCTCAACCACCTCTCCTGCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp AGTGGACGAAATGCCCATGACGTAGTCCTATTCTCTGCTGCTTCTCCTCGGGGCGAATCCAGAAGCTCCTaGGCCAGTCGGCAAGTCTTG +
Preference number: 5 (lower is better)
Translates to: SGRNAHDVVLFSAASPRGESRSS*ASRQVL
Trigger: CAAGACTTGCCGACTGGCCAAGGAGCTTCTGGATTC...GCCCCGAGGAGAAGCAGCAGAGAATAGGACTACGTCATGGGCATTTCGTCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS TCA 90 bp GGGGGTTGTTCTGTTCCACTGCTTCCAGGCACTGCAGCATGGCCGTaGCATGAGCGTCACTTAGCAGGAAGGCAGCATCTGTGTAGAATT +
Preference number: 5 (lower is better)
Translates to: GGCSVPLLPGTAAWP*HERHLAGRQHLCRI
Trigger: AATTCTACACAGATGCTGCCTTCCTGCTAAGTGACGCTCATGTCACGGCCATGCTGCAGTGCCTGGAAGCAGTGGAACAGAACAACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000449205.1
ENST00000467303.5
ENST00000474214.2
CDS TCA 90 bp CTGTGTCAAAGGAATCCAGAAGCTCCTTGGCCAGTCGGCAAGTCTTaGACATGTTCTTCATGTGACACAGCTGGACCCGCAGCAGCCGGA +
Preference number: 5 (lower is better)
Translates to: LCQRNPEAPWPVGKS*TCSSCDTAGPAAAG
Trigger: TCCGGCTGCTGCGGGTCCAGCTGTGTCACATGAAGAACATGTTCAAGACTTGCCGACTGGCCAAGGAGCTTCTGGATTCCTTTGACACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
CDS GCA 90 bp AGCAGGTTCTTGGTGCGGATTTGCTGGCGCCGAAGGCGGATCTTCTaGTTCAGCTCCTGGATCTCTCTATCACTGTCTTCCTCTTCCACT +
Preference number: 5 (lower is better)
Translates to: SRFLVRICWRRRRIF*FSSWISLSLSSSST
Trigger: AGTGGAAGAGGAAGACAGTGATAGAGAGATCCAGGAGCTGAAGCAGAAGATCCGCCTTCGGCGCCAGCAAATCCGCACCAAGAACCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
CDS CCA 90 bp ACCCAAAGTAGGAATGCTGAGCATAGCTGTTTGGAGGGGTGTATGTaGAACTGGGCAGGGCTGTCAGGCTCTGGCTCTTTGTCACCAGGA +
Preference number: 5 (lower is better)
Translates to: TQSRNAEHSCLEGCM*NWAGLSGSGSLSPG
Trigger: TCCTGGTGACAAAGAGCCAGAGCCTGACAGCCCTGCCCAGTTCCACATACACCCCTCCAAACAGCTATGCTCAGCATTCCTACTTTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000449205.1
ENST00000467303.5
CDS-3UTR CAA 90 bp TTCACAGCTGCCTCTGAGGTCTCTGAGGAGTCTAGGATAGTCAGGATTGTTCTGTCAGGCTCTGGCTCTTaGTCACCAGGAGCGGGCTCT +
Preference number: 5 (lower is better)
Translates to: FTAASEVSEESRIVRIVLSGSGS*SPGAGS
Trigger: AGAGCCCGCTCCTGGTGACAAAGAGCCAGAGCCTGA...CAGAACAATCCTGACTATCCTAGACTCCTCAGAGACCTCAGAGGCAGCTGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp CAGCAGCAGGAGAGGTGGTTGAGAAAGGCCTGGCTCAGAAGCTCCAGAACTGAACTGGAGGAGAACAAATaGGAACTGCTGCTCTCGGCA +
Preference number: 5 (lower is better)
Translates to: QQQERWLRKAWLRSSRTELEENK*ELLLSA
Trigger: TGCCGAGAGCAGCAGTTCCAATTTGTTCTCCTCCAG...TTCAGTTCTGGAGCTTCTGAGCCAGGCCTTTCTCAACCACCTCTCCTGCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp ATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTCCAGTTCCTCTCCCAGACAGCTGCCGAAGTCTaGCTCAGAGAGGTAGCTGAT +
Preference number: 5 (lower is better)
Translates to: IWLLSRLRNSSPFQFLSQTAAEV*LREVAD
Trigger: ATCAGCTACCTCTCTGAGCAAGACTTCGGCAGCTGT...CTGGGAGAGGAACTGGAAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CAA 90 bp CTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAATTGCTGAAGTCCCACTaGCGCAGAACCCGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: LTRGSLDQDDLAALQAKELLKSH*RRTRLG
Trigger: CCCCAGCCGGGTTCTGCGCAAGTGGGACTTCAGCAA...TTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CAA 90 bp ATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTCCAGTTCCCGCAGCAGCCGGACTaGATTGAGCAGCTTGACCTT +
Preference number: 5 (lower is better)
Translates to: IRMIWLLSRLRNSSPFQFPQQPD*IEQLDL
Trigger: AAGGTCAAGCTGCTCAATCAAGTCCGGCTGCTGCGG...GAACTGGAAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CAA 90 bp AGGTGGAAACGCAGTTCAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGGATGAAGCCTTTGGCTaGGCAGAGCATGCATCTCTC +
Preference number: 5 (lower is better)
Translates to: RWKRSSEHGRHTRNISTKDEAFG*AEHASL
Trigger: GAGAGATGCATGCTCTGCCAAGCCAAAGGCTTCATC...CTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTGAACTGCGTTTCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp TTCAAAGAGTGGCTCAGTTCTGCAACAGGTGTGACCCGGCCCGGAGGGAGGGCTATGAAGAAAGTCAGCTaGTGGCATCCTCTATGCTTC +
Preference number: 5 (lower is better)
Translates to: FKEWLSSATGVTRPGGRAMKKVS*WHPLCF
Trigger: GAAGCATAGAGGATGCCACAAGCTGACTTTCTTCAT...AGCCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAACTGAGCCACTCTTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp AAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTGACTGCAGGGATGGGGTGCGGTaGAGGGAGCTAGGGAAAAAT +
Preference number: 5 (lower is better)
Translates to: KLSVTTDSGPINLPTADCRDGVR*RELGKN
Trigger: ATTTTTCCCTAGCTCCCTCAACCGCACCCCATCCCT...GCAGTCAGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp TTCCACCAACCACAGGCAACTTTCCGCTCAGCTTCCAGGGCAGCACCCACGCCCGAAAGCTCTAAATCCTaGGCAGAGAACGTCAAAAAC +
Preference number: 5 (lower is better)
Translates to: FHQPQATFRSASRAAPTPESSKS*AENVKN
Trigger: GTTTTTGACGTTCTCTGCCAAGGATTTAGAGCTTTC...GGGCGTGGGTGCTGCCCTGGAAGCTGAGCGGAAAGTTGCCTGTGGTTGGTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp GAAGTGGTTCGCTCGAGGTCTCATGGCAAGTTAGAGACACAGCCACTCCACCTCAAGGCAAGTCAGATGTaGCGGAGAGGAAGACACCTC +
Preference number: 5 (lower is better)
Translates to: EVVRSRSHGKLETQPLHLKASQM*RRGRHL
Trigger: GAGGTGTCTTCCTCTCCGCAACATCTGACTTGCCTT...GAGGTGGAGTGGCTGTGTCTCTAACTTGCCATGAGACCTCGAGCGAACCACTTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp AGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGGCCAAGGTTTCACCATGTaGGCCAGGATGGTCCCAATC +
Preference number: 5 (lower is better)
Translates to: RPQTLEELGLAVSSTDRGQGFTM*ARMVPI
Trigger: GATTGGGACCATCCTGGCCAACATGGTGAAACCTTG...GCCTCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CAA 90 bp CCCCTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGAAAGTCTACTCGGTCTaGCCCGGAGCTACCCAGGAC +
Preference number: 5 (lower is better)
Translates to: PLTRGSLDQDDLAALQAKKVYSV*PGATQD
Trigger: GTCCTGGGTAGCTCCGGGCAAGACCGAGTAGACTTT...CTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS TCA 90 bp CCGCTCCAAGCCACCATACTTAGACCAGACGTTGGGGCTGTTGGTTaGTACCAAACCCTCCACCGTCGTCTTCAAATTACCCAGCAACTG +
Preference number: 5 (lower is better)
Translates to: PLQATILRPDVGAVG*YQTLHRRLQITQQL
Trigger: CAGTTGCTGGGTAATTTGAAGACGACGGTGGAGGGTTTGGTATCAACCAACAGCCCCAACGTCTGGTCTAAGTATGGTGGCTTGGAGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000449205.1
CDS CCA 90 bp GCAGAGCCAGAGTCAGAGAGCTGTGCCGAATCACGTGAGCTGAACTaGGAGCTGCTGGAGGTGACCCGAAAGCCTGTTATGTTTAAAAAC +
Preference number: 5 (lower is better)
Translates to: AEPESESCAESRELN*ELLEVTRKPVMFKN
Trigger: GTTTTTAAACATAACAGGCTTTCGGGTCACCTCCAGCAGCTCCCAGTTCAGCTCACGTGATTCGGCACAGCTCTCTGACTCTGGCTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471364.1
CDS-3UTR CAA 90 bp TTCACAGCTGCCTCTGAGGTCTCTGAGGAGTCTAGGATAGTCAGGATTGTTCTGCTAGCATCCCCCAGTTaGGGCGGAAAGTCGAACTGC +
Preference number: 5 (lower is better)
Translates to: FTAASEVSEESRIVRIVLLASPS*GGKSNC
Trigger: GCAGTTCGACTTTCCGCCCAAACTGGGGGATGCTAG...CAGAACAATCCTGACTATCCTAGACTCCTCAGAGACCTCAGAGGCAGCTGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273582.9
CDS-3UTR CAA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGACTGCAGCGTTTGCTTaGCGTTCAGATGCGGCAGCT +
Preference number: 5 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKTAAFA*RSDAAA
Trigger: AGCTGCCGCATCTGAACGCAAAGCAAACGCTGCAGT...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273582.9
CDS-3UTR CAA 90 bp TTCACAGCTGCCTCTGAGGTCTCTGAGGAGTCTAGGATAGTCAGGATTGTTCTGCGTTGGGGCTGTTGGTaGATACCAAACCCTCCACCG +
Preference number: 5 (lower is better)
Translates to: FTAASEVSEESRIVRIVLRWGCW*IPNPPP
Trigger: CGGTGGAGGGTTTGGTATCAACCAACAGCCCCAACG...CAGAACAATCCTGACTATCCTAGACTCCTCAGAGACCTCAGAGGCAGCTGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp AGAAGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGACAGACGTTGGGGCTGTaGGTTGATACCAAACCCTCC +
Preference number: 5 (lower is better)
Translates to: RRPQTLEELGLAVSSTDRQTLGL*VDTKPS
Trigger: GGAGGGTTTGGTATCAACCAACAGCCCCAACGTCTG...TCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGCAGACGTTGGGGCTGTaGGTTGATACCAAACCCTCC +
Preference number: 5 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKQTLGL*VDTKPS
Trigger: GGAGGGTTTGGTATCAACCAACAGCCCCAACGTCTG...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp AGGTGGAAACGCAGTTCAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGTACTTAGACCAGACGTaGGGGCTGTTGGTTGATACC +
Preference number: 5 (lower is better)
Translates to: RWKRSSEHGRHTRNISTKYLDQT*GLLVDT
Trigger: GGTATCAACCAACAGCCCCAACGTCTGGTCTAAGTA...CTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTGAACTGCGTTTCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTGCCAGGAGGCGGGGGTaGTTCTGTTCCACTGCTTCC +
Preference number: 5 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTARRRG*FCSTAS
Trigger: GGAAGCAGTGGAACAGAACAACCCCCGCCTCCTGGC...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR CAA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTGTGCCCTCTGCTTTCTaGAGGTTTCCGGGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTVPSAF*RFPGRA
Trigger: GGCCCTCCCCGGAAACCTCAAGAAAGCAGAGGGCAC...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR CAA 90 bp TGTGGCCCCCAAAATACCCAAATAAGTGGACGAAATGCCCATGACGTAGTCCTACCTCGGGGGTCCAAGTaGCCAATGGCCAGGTACTCA +
Preference number: 5 (lower is better)
Translates to: CGPQNTQISGRNAHDVVLPRGSK*PMARYS
Trigger: TGAGTACCTGGCCATTGGCAACTTGGACCCCCGAGG...TAGGACTACGTCATGGGCATTTCGTCCACTTATTTGGGTATTTTGGGGGCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp TCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTCCTCGGGGGTCCAAGTaGCCAATGGCCAGGTACTCA +
Preference number: 5 (lower is better)
Translates to: SLDQDDLAALQAKEQQPFPRGSK*PMARYS
Trigger: TGAGTACCTGGCCATTGGCAACTTGGACCCCCGAGG...AAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CAA 90 bp CAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGACTCGCACTCCTTTTACTGGAGGAGAACAAATaGGAACTGCTGCTCTCGGCA +
Preference number: 5 (lower is better)
Translates to: QSTGGTHGTSLLRLALLLLEENK*ELLLSA
Trigger: TGCCGAGAGCAGCAGTTCCAATTTGTTCTCCTCCAG...TAAAAGGAGTGCGAGTCTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp TGTGGCCCCCAAAATACCCAAATAAGTGGACGAAATGCCCATGACGTAGTCCTAATGGGGAGCAGGTTCTaGGTGCGGATTTGCTGGCGC +
Preference number: 5 (lower is better)
Translates to: CGPQNTQISGRNAHDVVLMGSRF*VRICWR
Trigger: GCGCCAGCAAATCCGCACCAAGAACCTGCTCCCCAT...TAGGACTACGTCATGGGCATTTCGTCCACTTATTTGGGTATTTTGGGGGCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp CAGCAGCAGGAGAGGTGGTTGAGAAAGGCCTGGCTCAGAAGCTCCAGAACTGAAGAGGAAACGAAGGATTaGCTGCTTGAGGCTGTGTTC +
Preference number: 5 (lower is better)
Translates to: QQQERWLRKAWLRSSRTEEETKD*LLEAVF
Trigger: GAACACAGCCTCAAGCAGCAAATCCTTCGTTTCCTC...TTCAGTTCTGGAGCTTCTGAGCCAGGCCTTTCTCAACCACCTCTCCTGCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp AAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTGACTGCCACTGGCAGAAGTACTaGCCCAGGTACTCACAGTAC +
Preference number: 5 (lower is better)
Translates to: KLSVTTDSGPINLPTADCHWQKY*PRYSQY
Trigger: GTACTGTGAGTACCTGGGCAAGTACTTCTGCCAGTG...GCAGTCAGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp CCTCCCCTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTCACTGGCAGAAGTACTaGCCCAGGTACTCACAGTAC +
Preference number: 5 (lower is better)
Translates to: PPLTRGSLDQDDLAALQAHWQKY*PRYSQY
Trigger: GTACTGTGAGTACCTGGGCAAGTACTTCTGCCAGTG...AGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAGGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CAA 90 bp GTTTACAAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTCCGCAGCAGCCGGACTaGATTGAGCAGCTTGACCTT +
Preference number: 5 (lower is better)
Translates to: VYKLSVTTDSGPINLPTAPQQPD*IEQLDL
Trigger: AAGGTCAAGCTGCTCAATCAAGTCCGGCTGCTGCGG...AGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTTGTAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp AAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTGACTGCGATGAAGCCTTTGGCTaGGCAGAGCATGCATCTCTC +
Preference number: 5 (lower is better)
Translates to: KLSVTTDSGPINLPTADCDEAFG*AEHASL
Trigger: GAGAGATGCATGCTCTGCCAAGCCAAAGGCTTCATC...GCAGTCAGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp AGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGGCAGACGCTGGAAGAACTaGGTCTTGCTGTCTCTTCCA +
Preference number: 5 (lower is better)
Translates to: RPQTLEELGLAVSSTDRGRRWKN*VLLSLP
Trigger: TGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCT...GCCTCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp AGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGGCGAGCCTATGAGACTGTaGAGTTCGGCTTCAGAAGCT +
Preference number: 5 (lower is better)
Translates to: RPQTLEELGLAVSSTDRGEPMRL*SSASEA
Trigger: AGCTTCTGAAGCCGAACTCAACAGTCTCATAGGCTC...GCCTCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGAGGGATGGGGTGCGGTaGAGGGAGCTAGGGAAAAAT +
Preference number: 5 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKRDGVR*RELGKN
Trigger: ATTTTTCCCTAGCTCCCTCAACCGCACCCCATCCCT...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS TCA 90 bp GGTACCGACCACCTTCATATTCCATGTACAGAGAGCTGGGTGTGCTaGCTTCACTGCTTTGACCAGAGTAGGGCAAAGGGCCTCTCAACT +
Preference number: 5 (lower is better)
Translates to: GTDHLHIPCTESWVC*LHCFDQSRAKGLST
Trigger: AGTTGAGAGGCCCTTTGCCCTACTCTGGTCAAAGCAGTGAAGTCAGCACACCCAGCTCTCTGTACATGGAATATGAAGGTGGTCGGTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000415452.5
CDS-3UTR CAA 90 bp GAGCCTGGCCTGAGCATCAGTTCTGTTCTTTGCTTCAAGATCACCAAGGTAGATCGTTGGGGCTGTTGGTaGATACCAAACCCTCCACCG +
Preference number: 5 (lower is better)
Translates to: EPGLSISSVLCFKITKVDRWGCW*IPNPPP
Trigger: CGGTGGAGGGTTTGGTATCAACCAACAGCCCCAACG...ATCTACCTTGGTGATCTTGAAGCAAAGAACAGAACTGATGCTCAGGCCAGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTTCAGGCTCTGGCTCTTaGTCACCAGGAGCGGGCTCT +
Preference number: 5 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTSGSGS*SPGAGS
Trigger: AGAGCCCGCTCCTGGTGACAAAGAGCCAGAGCCTGA...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR CAA 90 bp GTTTACAAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTCTTCTCTCTGAGCCATaGTTGGGCACGGATTGGTGG +
Preference number: 5 (lower is better)
Translates to: VYKLSVTTDSGPINLPTALLSEP*LGTDWW
Trigger: CCACCAATCCGTGCCCAACAATGGCTCAGAGAGAAG...AGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTTGTAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTCCTCGGGGGTCCAAGTaGCCAATGGCCAGGTACTCA +
Preference number: 5 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTPRGSK*PMARYS
Trigger: TGAGTACCTGGCCATTGGCAACTTGGACCCCCGAGG...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR CAA 90 bp GGAGTAGGAATGAGACGATGCGTGATGAGCTCAGTGTGCCACTTACAGAGGAAGGCTGACTTCACTGCTTaGACCAGAGTAGGGCAAAGG +
Preference number: 5 (lower is better)
Translates to: GVGMRRCVMSSVCHLQRKADFTA*TRVGQR
Trigger: CCTTTGCCCTACTCTGGTCAAAGCAGTGAAGTCAGC...CTTCCTCTGTAAGTGGCACACTGAGCTCATCACGCATCGTCTCATTCCTACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp AGAAGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAACAGCTGCCGAAGTCTaGCTCAGAGAGGTAGCTGAT +
Preference number: 5 (lower is better)
Translates to: RRPQTLEELGLAVSSTDRTAAEV*LREVAD
Trigger: ATCAGCTACCTCTCTGAGCAAGACTTCGGCAGCTGT...TCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCTTCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp CCTCCCCTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTGAGGAAACGAAGGATTaGCTGCTTGAGGCTGTGTTC +
Preference number: 5 (lower is better)
Translates to: PPLTRGSLDQDDLAALQAEETKD*LLEAVF
Trigger: GAACACAGCCTCAAGCAGCAAATCCTTCGTTTCCTC...AGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAGGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CAA 90 bp GCATCCTCTATGCTTCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACAGGGGCCCACTCCAAGTaGCCACGAACACGAATCCGC +
Preference number: 5 (lower is better)
Translates to: ASSMLQIFQTGTPGNIGTGAHSK*PRTRIR
Trigger: GCGGATTCGTGTTCGTGGCAACTTGGAGTGGGCCCC...TGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGAAGCATAGAGGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp AGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGGCTGGAAGAACTTGGTCTaGCTGTCTCTTCCACTGACA +
Preference number: 5 (lower is better)
Translates to: RPQTLEELGLAVSSTDRGWKNLV*LSLPLT
Trigger: TGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCA...GCCTCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp TCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATTCACAGCTGCCTCGCGCCTCACGTATGCTaGCGGCGTAAGGCTACAGGT +
Preference number: 5 (lower is better)
Translates to: SNISNRNSRQHRDIHSCLAPHVC*RRKATG
Trigger: ACCTGTAGCCTTACGCCGCAAGCATACGTGAGGCGC...GAGGCAGCTGTGAATGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTCGTTGGGGCTGTTGGTaGATACCAAACCCTCCACCG +
Preference number: 5 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTRWGCW*IPNPPP
Trigger: CGGTGGAGGGTTTGGTATCAACCAACAGCCCCAACG...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR CAA 90 bp AGAATTCAATCCCAGAACAAAAATGATGCAGGCTTTAGTTCACAGAGCTGCCAGGCCAGGAGGCGGGGGTaGTTCTGTTCCACTGCTTCC +
Preference number: 5 (lower is better)
Translates to: RIQSQNKNDAGFSSQSCQARRRG*FCSTAS
Trigger: GGAAGCAGTGGAACAGAACAACCCCCGCCTCCTGGC...CTGGCAGCTCTGTGAACTAAAGCCTGCATCATTTTTGTTCTGGGATTGAATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp GTTTACAAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTACAGCTGCCGAAGTCTaGCTCAGAGAGGTAGCTGAT +
Preference number: 5 (lower is better)
Translates to: VYKLSVTTDSGPINLPTATAAEV*LREVAD
Trigger: ATCAGCTACCTCTCTGAGCAAGACTTCGGCAGCTGT...AGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTTGTAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp CCTCCCCTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTCACTGGCTCATCATGTaGCACTTCATTAGCTCGATG +
Preference number: 5 (lower is better)
Translates to: PPLTRGSLDQDDLAALQAHWLIM*HFISSM
Trigger: CATCGAGCTAATGAAGTGCAACATGATGAGCCAGTG...AGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAGGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CAA 90 bp AGAATTCAATCCCAGAACAAAAATGATGCAGGCTTTAGTTCACAGAGCTGCCAGTTGCTGAAGTCCCACTaGCGCAGAACCCGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: RIQSQNKNDAGFSSQSCQLLKSH*RRTRLG
Trigger: CCCCAGCCGGGTTCTGCGCAAGTGGGACTTCAGCAA...CTGGCAGCTCTGTGAACTAAAGCCTGCATCATTTTTGTTCTGGGATTGAATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp GAAGTGGTTCGCTCGAGGTCTCATGGCAAGTTAGAGACACAGCCACTCCACCTCTTTATGTCCTGCACGTaGAAGAGAGGATCATTCCAG +
Preference number: 5 (lower is better)
Translates to: EVVRSRSHGKLETQPLHLFMSCT*KRGSFQ
Trigger: CTGGAATGATCCTCTCTTCAACGTGCAGGACATAAA...GAGGTGGAGTGGCTGTGTCTCTAACTTGCCATGAGACCTCGAGCGAACCACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp AGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGGCTTTATGTCCTGCACGTaGAAGAGAGGATCATTCCAG +
Preference number: 5 (lower is better)
Translates to: RPQTLEELGLAVSSTDRGFMSCT*KRGSFQ
Trigger: CTGGAATGATCCTCTCTTCAACGTGCAGGACATAAA...GCCTCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp TCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAACAGCAGCCCTTTGAATCCAGAAGCTCCTaGGCCAGTCGGCAAGTCTTG +
Preference number: 5 (lower is better)
Translates to: SLDQDDLAALQAKEQQPFESRSS*ASRQVL
Trigger: CAAGACTTGCCGACTGGCCAAGGAGCTTCTGGATTC...AAAGGGCTGCTGTTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CAA 90 bp AAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTGACTGCTGGAAGAACTTGGTCTaGCTGTCTCTTCCACTGACA +
Preference number: 5 (lower is better)
Translates to: KLSVTTDSGPINLPTADCWKNLV*LSLPLT
Trigger: TGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCA...GCAGTCAGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp CACCTCATTTTAAGTGACAGTTACACCATGCACCAGAAACCCAGAGAAGTGAAGGCGCCTCACGTATGCTaGCGGCGTAAGGCTACAGGT +
Preference number: 5 (lower is better)
Translates to: HLILSDSYTMHQKPREVKAPHVC*RRKATG
Trigger: ACCTGTAGCCTTACGCCGCAAGCATACGTGAGGCGC...CTTCACTTCTCTGGGTTTCTGGTGCATGGTGTAACTGTCACTTAAAATGAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp GAGCCTGGCCTGAGCATCAGTTCTGTTCTTTGCTTCAAGATCACCAAGGTAGATCAGGGTTTCACCACATaGGCCAGGCTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: EPGLSISSVLCFKITKVDQGFTT*ARLVSN
Trigger: GTTTGAGACCAGCCTGGCCAATGTGGTGAAACCCTG...ATCTACCTTGGTGATCTTGAAGCAAAGAACAGAACTGATGCTCAGGCCAGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp AGGTGGAAACGCAGTTCAGAGCACGGGCGGCACACACGGAACATCTCTACTAAGCAGAAGCTGTCAGCATaGTCATCCTTTGATCCTATG +
Preference number: 5 (lower is better)
Translates to: RWKRSSEHGRHTRNISTKQKLSA*SSFDPM
Trigger: CATAGGATCAAAGGATGACAATGCTGACAGCTTCTG...CTTAGTAGAGATGTTCCGTGTGTGCCGCCCGTGCTCTGAACTGCGTTTCCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp CAAGACGGCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGAAACATCCACAGAACTaGATGACAGGGAGTAGGAAT +
Preference number: 5 (lower is better)
Translates to: QDGTSVLQRSDLEKELDVKHPQN*MTGSRN
Trigger: ATTCCTACTCCCTGTCATCAAGTTCTGTGGATGTTT...CACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGCCGTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp GCATCCTCTATGCTTCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACACCGTCACTGCAGCGTTaGCTTTGCGTTCAGATGCGG +
Preference number: 5 (lower is better)
Translates to: ASSMLQIFQTGTPGNIGTPSLQR*LCVQMR
Trigger: CCGCATCTGAACGCAAAGCAAACGCTGCAGTGACGG...TGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGAAGCATAGAGGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273582.9
CDS-3UTR CAA 90 bp AAGGGGAGAGAACGGAGTCGGGTTGTACTTTTACTCAGAAGCACAACGACCATCACCGTGCCAGATGTTTaGAGAGTGCCGATTGAGAGA +
Preference number: 5 (lower is better)
Translates to: KGRERSRVVLLLRSTTTITVPDV*RVPIER
Trigger: TCTCTCAATCGGCACTCTCAAAACATCTGGCACGGT...GATGGTCGTTGTGCTTCTGAGTAAAAGTACAACCCGACTCCGTTCTCTCCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273582.9
CDS-3UTR CAA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTCAGACGTTGGGGCTGTaGGTTGATACCAAACCCTCC +
Preference number: 5 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTQTLGL*VDTKPS
Trigger: GGAGGGTTTGGTATCAACCAACAGCCCCAACGTCTG...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR CAA 90 bp TCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATTCACAGCTGCCTCCTTCTCTCTGAGCCATaGTTGGGCACGGATTGGTGG +
Preference number: 5 (lower is better)
Translates to: SNISNRNSRQHRDIHSCLLLSEP*LGTDWW
Trigger: CCACCAATCCGTGCCCAACAATGGCTCAGAGAGAAG...GAGGCAGCTGTGAATGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTCTTCTCTCTGAGCCATaGTTGGGCACGGATTGGTGG +
Preference number: 5 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTLLSEP*LGTDWW
Trigger: CCACCAATCCGTGCCCAACAATGGCTCAGAGAGAAG...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR CAA 90 bp CTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAACTGGAGGAGAACAAATaGGAACTGCTGCTCTCGGCA +
Preference number: 5 (lower is better)
Translates to: LTRGSLDQDDLAALQAKELEENK*ELLLSA
Trigger: TGCCGAGAGCAGCAGTTCCAATTTGTTCTCCTCCAG...TTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CAA 90 bp GGAGTAGGAATGAGACGATGCGTGATGAGCTCAGTGTGCCACTTACAGAGGAAGCACTGGCTCATCATGTaGCACTTCATTAGCTCGATG +
Preference number: 5 (lower is better)
Translates to: GVGMRRCVMSSVCHLQRKHWLIM*HFISSM
Trigger: CATCGAGCTAATGAAGTGCAACATGATGAGCCAGTG...CTTCCTCTGTAAGTGGCACACTGAGCTCATCACGCATCGTCTCATTCCTACTCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp TTCACAGCTGCCTCTGAGGTCTCTGAGGAGTCTAGGATAGTCAGGATTGTTCTGGAGGAAACGAAGGATTaGCTGCTTGAGGCTGTGTTC +
Preference number: 5 (lower is better)
Translates to: FTAASEVSEESRIVRIVLEETKD*LLEAVF
Trigger: GAACACAGCCTCAAGCAGCAAATCCTTCGTTTCCTC...CAGAACAATCCTGACTATCCTAGACTCCTCAGAGACCTCAGAGGCAGCTGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp GCATCCTCTATGCTTCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACACCGCAGCAGCCGGACTaGATTGAGCAGCTTGACCTT +
Preference number: 5 (lower is better)
Translates to: ASSMLQIFQTGTPGNIGTPQQPD*IEQLDL
Trigger: AAGGTCAAGCTGCTCAATCAAGTCCGGCTGCTGCGG...TGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGAAGCATAGAGGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp AGAAGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGATGGAAGAACTTGGTCTaGCTGTCTCTTCCACTGACA +
Preference number: 5 (lower is better)
Translates to: RRPQTLEELGLAVSSTDRWKNLV*LSLPLT
Trigger: TGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCA...TCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCTTCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp TCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATTCACAGCTGCCTCCAGGGTTTCACCACATaGGCCAGGCTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: SNISNRNSRQHRDIHSCLQGFTT*ARLVSN
Trigger: GTTTGAGACCAGCCTGGCCAATGTGGTGAAACCCTG...GAGGCAGCTGTGAATGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp CAGCAGCAGGAGAGGTGGTTGAGAAAGGCCTGGCTCAGAAGCTCCAGAACTGAAAAACATCCACAGAACTaGATGACAGGGAGTAGGAAT +
Preference number: 5 (lower is better)
Translates to: QQQERWLRKAWLRSSRTEKHPQN*MTGSRN
Trigger: ATTCCTACTCCCTGTCATCAAGTTCTGTGGATGTTT...TTCAGTTCTGGAGCTTCTGAGCCAGGCCTTTCTCAACCACCTCTCCTGCTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTGCTGAGCATAGCTGTTaGGAGGGGTGTATGTGGAAC +
Preference number: 5 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTAEHSC*EGCMWN
Trigger: GTTCCACATACACCCCTCCAAACAGCTATGCTCAGC...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR CAA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTATTGTTGGGCACGGATaGGTGGAGGCTAGAGAAGGA +
Preference number: 5 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTIVGHG*VEAREG
Trigger: TCCTTCTCTAGCCTCCACCAATCCGTGCCCAACAAT...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR CAA 90 bp GAGCCTGGCCTGAGCATCAGTTCTGTTCTTTGCTTCAAGATCACCAAGGTAGATTGGAGCTCATTTCATTaGGGGTCAAAGGGGAATCCC +
Preference number: 5 (lower is better)
Translates to: EPGLSISSVLCFKITKVDWSSFH*GSKGNP
Trigger: GGGATTCCCCTTTGACCCCAAATGAAATGAGCTCCA...ATCTACCTTGGTGATCTTGAAGCAAAGAACAGAACTGATGCTCAGGCCAGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp CTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAATGGAGCTCATTTCATTaGGGGTCAAAGGGGAATCCC +
Preference number: 5 (lower is better)
Translates to: LTRGSLDQDDLAALQAKEWSSFH*GSKGNP
Trigger: GGGATTCCCCTTTGACCCCAAATGAAATGAGCTCCA...TTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CAA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTCTGGAGGAGAACAAATaGGAACTGCTGCTCTCGGCA +
Preference number: 5 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTLEENK*ELLLSA
Trigger: TGCCGAGAGCAGCAGTTCCAATTTGTTCTCCTCCAG...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR CAA 90 bp CAAGACGGCACATCTGTCCTCCAGCGCAGTGACCTGGAGAAAGAGCTGGATGTGTCTGATGTCAGCATCTaGGATTTCAAATTCATCAAC +
Preference number: 5 (lower is better)
Translates to: QDGTSVLQRSDLEKELDVSDVSI*DFKFIN
Trigger: GTTGATGAATTTGAAATCCAAGATGCTGACATCAGA...CACATCCAGCTCTTTCTCCAGGTCACTGCGCTGGAGGACAGATGTGCCGTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp TCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATTCACAGCTGCCTCCACTGGCAGAAGTACTaGCCCAGGTACTCACAGTAC +
Preference number: 5 (lower is better)
Translates to: SNISNRNSRQHRDIHSCLHWQKY*PRYSQY
Trigger: GTACTGTGAGTACCTGGGCAAGTACTTCTGCCAGTG...GAGGCAGCTGTGAATGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp CCCCTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGTTTATGTCCTGCACGTaGAAGAGAGGATCATTCCAG +
Preference number: 5 (lower is better)
Translates to: PLTRGSLDQDDLAALQAKFMSCT*KRGSFQ
Trigger: CTGGAATGATCCTCTCTTCAACGTGCAGGACATAAA...CTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CAA 90 bp GAGCCTGGCCTGAGCATCAGTTCTGTTCTTTGCTTCAAGATCACCAAGGTAGATAGACGCTGGAAGAACTaGGTCTTGCTGTCTCTTCCA +
Preference number: 5 (lower is better)
Translates to: EPGLSISSVLCFKITKVDRRWKN*VLLSLP
Trigger: TGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCT...ATCTACCTTGGTGATCTTGAAGCAAAGAACAGAACTGATGCTCAGGCCAGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp GTTTACAAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTGAGAACGGAGTCGGGTaGTACTTTTACTCAGAAGCA +
Preference number: 5 (lower is better)
Translates to: VYKLSVTTDSGPINLPTAENGVG*YFYSEA
Trigger: TGCTTCTGAGTAAAAGTACAACCCGACTCCGTTCTC...AGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTTGTAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp GTTTACAAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTTCCACCTCACTTTCCTaGATGTGTGTGGTCCAGTTT +
Preference number: 5 (lower is better)
Translates to: VYKLSVTTDSGPINLPTASTSLS*MCVVQF
Trigger: AAACTGGACCACACACATCAAGGAAAGTGAGGTGGA...AGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTTGTAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp TCTTTGTACTCTCAGCTCTGGCATGGTGTCTGGAACACGGAGGCATCTATAGATAACTTCGCCTTATCATaGCAGGATTCTGGAGCTCCC +
Preference number: 5 (lower is better)
Translates to: SLYSQLWHGVWNTEASIDNFALS*QDSGAP
Trigger: GGGAGCTCCAGAATCCTGCAATGATAAGGCGAAGTT...ATCTATAGATGCCTCCGTGTTCCAGACACCATGCCAGAGCTGAGAGTACAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CAA 90 bp CTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAAAACTTCGCCTTATCATaGCAGGATTCTGGAGCTCCC +
Preference number: 5 (lower is better)
Translates to: LTRGSLDQDDLAALQAKENFALS*QDSGAP
Trigger: GGGAGCTCCAGAATCCTGCAATGATAAGGCGAAGTT...TTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CAA 90 bp GTTTACAAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTGTGACTGAAGGACATTaGGGATGTGTGTCCTCTGAT +
Preference number: 5 (lower is better)
Translates to: VYKLSVTTDSGPINLPTAVTEGH*GCVSSD
Trigger: ATCAGAGGACACACATCCCAAATGTCCTTCAGTCAC...AGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTTGTAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CAA 90 bp AGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGAGGCGTTGAGAACAGAAGTTaGGGAACTTACTGGAAATCA +
Preference number: 5 (lower is better)
Translates to: RPQTLEELGLAVSSTDRGVENRS*GTYWKS
Trigger: TGATTTCCAGTAAGTTCCCAAACTTCTGTTCTCAAC...GCCTCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CAA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTTACTTAGACCAGACGTaGGGGCTGTTGGTTGATACC +
Preference number: 5 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTYLDQT*GLLVDT
Trigger: GGTATCAACCAACAGCCCCAACGTCTGGTCTAAGTA...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR CAA 90 bp GCATCCTCTATGCTTCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACAATTGTTGGGCACGGATaGGTGGAGGCTAGAGAAGGA +
Preference number: 5 (lower is better)
Translates to: ASSMLQIFQTGTPGNIGTIVGHG*VEAREG
Trigger: TCCTTCTCTAGCCTCCACCAATCCGTGCCCAACAAT...TGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGAAGCATAGAGGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp TCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATTCACAGCTGCCTCTGGAGCTCATTTCATTaGGGGTCAAAGGGGAATCCC +
Preference number: 5 (lower is better)
Translates to: SNISNRNSRQHRDIHSCLWSSFH*GSKGNP
Trigger: GGGATTCCCCTTTGACCCCAAATGAAATGAGCTCCA...GAGGCAGCTGTGAATGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp CAGAACATCTCTTTCTGCCACCTGAAAAGTCCCCATAACAAGCCCTCTCTTACTTGGAGCTCATTTCATTaGGGGTCAAAGGGGAATCCC +
Preference number: 5 (lower is better)
Translates to: QNISFCHLKSPHNKPSLTWSSFH*GSKGNP
Trigger: GGGATTCCCCTTTGACCCCAAATGAAATGAGCTCCA...AGTAAGAGAGGGCTTGTTATGGGGACTTTTCAGGTGGCAGAAAGAGATGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS-3UTR CAA 90 bp TGTGGCCCCCAAAATACCCAAATAAGTGGACGAAATGCCCATGACGTAGTCCTACACTGGCTCATCATGTaGCACTTCATTAGCTCGATG +
Preference number: 5 (lower is better)
Translates to: CGPQNTQISGRNAHDVVLHWLIM*HFISSM
Trigger: CATCGAGCTAATGAAGTGCAACATGATGAGCCAGTG...TAGGACTACGTCATGGGCATTTCGTCCACTTATTTGGGTATTTTGGGGGCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp AAGGGGAGAGAACGGAGTCGGGTTGTACTTTTACTCAGAAGCACAACGACCATCATGAAGAAAGTCAGCTaGTGGCATCCTCTATGCTTC +
Preference number: 5 (lower is better)
Translates to: KGRERSRVVLLLRSTTTIMKKVS*WHPLCF
Trigger: GAAGCATAGAGGATGCCACAAGCTGACTTTCTTCAT...GATGGTCGTTGTGCTTCTGAGTAAAAGTACAACCCGACTCCGTTCTCTCCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp AAGGGGAGAGAACGGAGTCGGGTTGTACTTTTACTCAGAAGCACAACGACCATCCTGGGACTTGGCTTTTaGAGTCTCACTATGAACAGA +
Preference number: 5 (lower is better)
Translates to: KGRERSRVVLLLRSTTTILGLGF*SLTMNR
Trigger: TCTGTTCATAGTGAGACTCAAAAAGCCAAGTCCCAG...GATGGTCGTTGTGCTTCTGAGTAAAAGTACAACCCGACTCCGTTCTCTCCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp TTCACAGCTGCCTCTGAGGTCTCTGAGGAGTCTAGGATAGTCAGGATTGTTCTGCTGGGACTTGGCTTTTaGAGTCTCACTATGAACAGA +
Preference number: 5 (lower is better)
Translates to: FTAASEVSEESRIVRIVLLGLGF*SLTMNR
Trigger: TCTGTTCATAGTGAGACTCAAAAAGCCAAGTCCCAG...CAGAACAATCCTGACTATCCTAGACTCCTCAGAGACCTCAGAGGCAGCTGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp TCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATTCACAGCTGCCTCGAGCCTATGAGACTGTaGAGTTCGGCTTCAGAAGCT +
Preference number: 5 (lower is better)
Translates to: SNISNRNSRQHRDIHSCLEPMRL*SSASEA
Trigger: AGCTTCTGAAGCCGAACTCAACAGTCTCATAGGCTC...GAGGCAGCTGTGAATGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp TCTTTGTACTCTCAGCTCTGGCATGGTGTCTGGAACACGGAGGCATCTATAGATCTCTTCTGCTATGTCTaGAATCTTGTCTCCACCTGG +
Preference number: 5 (lower is better)
Translates to: SLYSQLWHGVWNTEASIDLFCYV*NLVSTW
Trigger: CCAGGTGGAGACAAGATTCAAGACATAGCAGAAGAG...ATCTATAGATGCCTCCGTGTTCCAGACACCATGCCAGAGCTGAGAGTACAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CAA 90 bp TCTTTGTACTCTCAGCTCTGGCATGGTGTCTGGAACACGGAGGCATCTATAGATTCCACCTCACTTTCCTaGATGTGTGTGGTCCAGTTT +
Preference number: 5 (lower is better)
Translates to: SLYSQLWHGVWNTEASIDSTSLS*MCVVQF
Trigger: AAACTGGACCACACACATCAAGGAAAGTGAGGTGGA...ATCTATAGATGCCTCCGTGTTCCAGACACCATGCCAGAGCTGAGAGTACAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CAA 90 bp TTCACAGCTGCCTCTGAGGTCTCTGAGGAGTCTAGGATAGTCAGGATTGTTCTGACTGGAAATCAAGCTTaGGCTTCCTGTGAACTACAC +
Preference number: 5 (lower is better)
Translates to: FTAASEVSEESRIVRIVLTGNQA*ASCELH
Trigger: GTGTAGTTCACAGGAAGCCAAAGCTTGATTTCCAGT...CAGAACAATCCTGACTATCCTAGACTCCTCAGAGACCTCAGAGGCAGCTGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CAA 90 bp ATGATACCTGACATGCAGGTGAAACCTAGAGGAGAAGGCCACAGACGCTGGAAGGAGACCTTGGCAATTTaGAGTAGGGTCAAGTGTTTT +
Preference number: 5 (lower is better)
Translates to: MIPDMQVKPRGEGHRRWKETLAI*SRVKCF
Trigger: AAAACACTTGACCCTACTCAAAATTGCCAAGGTCTC...CTTCCAGCGTCTGTGGCCTTCTCCTCTAGGTTTCACCTGCATGTCAGGTATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CAA 90 bp CTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAATTAGATCAGGATGATTaGGCTGCTCTCCAGGCTAAG +
Preference number: 5 (lower is better)
Translates to: LTRGSLDQDDLAALQAKELDQDD*AALQAK
Trigger: CTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAA...TTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CAA 90 bp GCATCCTCTATGCTTCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATACTTAGACCAGACGTaGGGGCTGTTGGTTGATACC +
Preference number: 5 (lower is better)
Translates to: ASSMLQIFQTGTPGNIGTYLDQT*GLLVDT
Trigger: GGTATCAACCAACAGCCCCAACGTCTGGTCTAAGTA...TGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGAAGCATAGAGGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp AGAATTCAATCCCAGAACAAAAATGATGCAGGCTTTAGTTCACAGAGCTGCCAGATTGTTGGGCACGGATaGGTGGAGGCTAGAGAAGGA +
Preference number: 5 (lower is better)
Translates to: RIQSQNKNDAGFSSQSCQIVGHG*VEAREG
Trigger: TCCTTCTCTAGCCTCCACCAATCCGTGCCCAACAAT...CTGGCAGCTCTGTGAACTAAAGCCTGCATCATTTTTGTTCTGGGATTGAATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp GTTTACAAATTATCTGTCACCACAGACTCTGGACCCATCAACCTGCCGACGGCTGTGAATCAATGGTCCTaGTTTTCCTCTTCAACAGTC +
Preference number: 5 (lower is better)
Translates to: VYKLSVTTDSGPINLPTAVNQWS*FSSSTV
Trigger: GACTGTTGAAGAGGAAAACAAGGACCATTGATTCAC...AGCCGTCGGCAGGTTGATGGGTCCAGAGTCTGTGGTGACAGATAATTTGTAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CAA 90 bp AGAAGGCCACAGACGCTGGAAGAACTTGGTCTTGCTGTCTCTTCCACTGACAGATCTGATGTCAGCATCTaGGATTTCAAATTCATCAAC +
Preference number: 5 (lower is better)
Translates to: RRPQTLEELGLAVSSTDRSDVSI*DFKFIN
Trigger: GTTGATGAATTTGAAATCCAAGATGCTGACATCAGA...TCTGTCAGTGGAAGAGACAGCAAGACCAAGTTCTTCCAGCGTCTGTGGCCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp TCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATTCACAGCTGCCTCTTTATGTCCTGCACGTaGAAGAGAGGATCATTCCAG +
Preference number: 5 (lower is better)
Translates to: SNISNRNSRQHRDIHSCLFMSCT*KRGSFQ
Trigger: CTGGAATGATCCTCTCTTCAACGTGCAGGACATAAA...GAGGCAGCTGTGAATGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp TGTGGCCCCCAAAATACCCAAATAAGTGGACGAAATGCCCATGACGTAGTCCTACATCAGTTCTGTTCTTaGCTTCAAGATCACCAAGGT +
Preference number: 5 (lower is better)
Translates to: CGPQNTQISGRNAHDVVLHQFCS*LQDHQG
Trigger: ACCTTGGTGATCTTGAAGCAAAGAACAGAACTGATG...TAGGACTACGTCATGGGCATTTCGTCCACTTATTTGGGTATTTTGGGGGCCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp GAGCCTGGCCTGAGCATCAGTTCTGTTCTTTGCTTCAAGATCACCAAGGTAGATCATCAGTTCTGTTCTTaGCTTCAAGATCACCAAGGT +
Preference number: 5 (lower is better)
Translates to: EPGLSISSVLCFKITKVDHQFCS*LQDHQG
Trigger: ACCTTGGTGATCTTGAAGCAAAGAACAGAACTGATG...ATCTACCTTGGTGATCTTGAAGCAAAGAACAGAACTGATGCTCAGGCCAGGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp TCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATTCACAGCTGCCTCCAGAAGCTGTCAGCATaGTCATCCTTTGATCCTATG +
Preference number: 5 (lower is better)
Translates to: SNISNRNSRQHRDIHSCLQKLSA*SSFDPM
Trigger: CATAGGATCAAAGGATGACAATGCTGACAGCTTCTG...GAGGCAGCTGTGAATGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp CACCTCATTTTAAGTGACAGTTACACCATGCACCAGAAACCCAGAGAAGTGAAGCTCTTCTGCTATGTCTaGAATCTTGTCTCCACCTGG +
Preference number: 5 (lower is better)
Translates to: HLILSDSYTMHQKPREVKLFCYV*NLVSTW
Trigger: CCAGGTGGAGACAAGATTCAAGACATAGCAGAAGAG...CTTCACTTCTCTGGGTTTCTGGTGCATGGTGTAACTGTCACTTAAAATGAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS TCA 90 bp GAGAACATCGAGGCCAGTGACACTGACAGTCCGTTCTTTGATATGTaGGTCAGGTTAGATCCTTCGCTACCATCTTGGATTTCAAATTCA +
Preference number: 5 (lower is better)
Translates to: ENIEASDTDSPFFDM*VRLDPSLPSWISNS
Trigger: TGAATTTGAAATCCAAGATGGTAGCGAAGGATCTAACCTGACTCACATATCAAAGAACGGACTGTCAGTGTCACTGGCCTCGATGTTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CAA 90 bp ACGAAAGCTCTAAATCCTTGGCAGAGAACGTCAAAAACAGCCTCATTTAAGTGGCACTGGCTCATCATGTaGCACTTCATTAGCTCGATG +
Preference number: 5 (lower is better)
Translates to: TKALNPWQRTSKTASFKWHWLIM*HFISSM
Trigger: CATCGAGCTAATGAAGTGCAACATGATGAGCCAGTG...CCACTTAAATGAGGCTGTTTTTGACGTTCTCTGCCAAGGATTTAGAGCTTTCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp AGAATTCAATCCCAGAACAAAAATGATGCAGGCTTTAGTTCACAGAGCTGCCAGGAGAACGGAGTCGGGTaGTACTTTTACTCAGAAGCA +
Preference number: 5 (lower is better)
Translates to: RIQSQNKNDAGFSSQSCQENGVG*YFYSEA
Trigger: TGCTTCTGAGTAAAAGTACAACCCGACTCCGTTCTC...CTGGCAGCTCTGTGAACTAAAGCCTGCATCATTTTTGTTCTGGGATTGAATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp TCTTTGTACTCTCAGCTCTGGCATGGTGTCTGGAACACGGAGGCATCTATAGATTCAGATAGTGGTAACTaGCAAAGTGCTTCCAAAACA +
Preference number: 5 (lower is better)
Translates to: SLYSQLWHGVWNTEASIDSDSGN*QSASKT
Trigger: TGTTTTGGAAGCACTTTGCAAGTTACCACTATCTGA...ATCTATAGATGCCTCCGTGTTCCAGACACCATGCCAGAGCTGAGAGTACAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CAA 90 bp TCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACATTCACAGCTGCCTCGAAAGCTCTAAATCCTaGGCAGAGAACGTCAAAAAC +
Preference number: 5 (lower is better)
Translates to: SNISNRNSRQHRDIHSCLESSKS*AENVKN
Trigger: GTTTTTGACGTTCTCTGCCAAGGATTTAGAGCTTTC...GAGGCAGCTGTGAATGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp CTCACTCGAGGTTCTTTAGATCAGGATGATTTGGCTGCTCTCCAGGCTAAGGAATCCTTCGCTACCATCTaGGATTTCAAATTCATCAAC +
Preference number: 5 (lower is better)
Translates to: LTRGSLDQDDLAALQAKESFATI*DFKFIN
Trigger: GTTGATGAATTTGAAATCCAAGATGGTAGCGAAGGA...TTCCTTAGCCTGGAGAGCAGCCAAATCATCCTGATCTAAAGAACCTCGAGTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS-3UTR CAA 90 bp ACGAAAGCTCTAAATCCTTGGCAGAGAACGTCAAAAACAGCCTCATTTAAGTGGAACTTCGCCTTATCATaGCAGGATTCTGCAATGGGA +
Preference number: 5 (lower is better)
Translates to: TKALNPWQRTSKTASFKWNFALS*QDSAMG
Trigger: TCCCATTGCAGAATCCTGCAATGATAAGGCGAAGTT...CCACTTAAATGAGGCTGTTTTTGACGTTCTCTGCCAAGGATTTAGAGCTTTCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273582.9
CDS-3UTR CAA 90 bp TGTGGCCCCCAAAATACCCAAATAAGTGGACGAAATGCCCATGACGTAGTCCTATCTGATGTCAGCATCTaGGATTTCAAATTCATCAAC +
Preference number: 5 (lower is better)
Translates to: CGPQNTQISGRNAHDVVLSDVSI*DFKFIN
Trigger: GTTGATGAATTTGAAATCCAAGATGCTGACATCAGA...TAGGACTACGTCATGGGCATTTCGTCCACTTATTTGGGTATTTTGGGGGCCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS-3UTR CAA 90 bp AGAATTCAATCCCAGAACAAAAATGATGCAGGCTTTAGTTCACAGAGCTGCCAGATGAAGAAAGTCAGCTaGTGGCATCCTCTATGCTTC +
Preference number: 5 (lower is better)
Translates to: RIQSQNKNDAGFSSQSCQMKKVS*WHPLCF
Trigger: GAAGCATAGAGGATGCCACAAGCTGACTTTCTTCAT...CTGGCAGCTCTGTGAACTAAAGCCTGCATCATTTTTGTTCTGGGATTGAATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp CACCTCATTTTAAGTGACAGTTACACCATGCACCAGAAACCCAGAGAAGTGAAGCATCAGTTCTGTTCTTaGCTTCAAGATCACCAAGGT +
Preference number: 5 (lower is better)
Translates to: HLILSDSYTMHQKPREVKHQFCS*LQDHQG
Trigger: ACCTTGGTGATCTTGAAGCAAAGAACAGAACTGATG...CTTCACTTCTCTGGGTTTCTGGTGCATGGTGTAACTGTCACTTAAAATGAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp GCATCCTCTATGCTTCAAATATTTCAAACAGGAACTCCCGGCAACATAGGGACAAGCTTTTCTCCAACTTaGACCAAAGAAGCTAAGGCA +
Preference number: 5 (lower is better)
Translates to: ASSMLQIFQTGTPGNIGTSFSPT*TKEAKA
Trigger: TGCCTTAGCTTCTTTGGTCAAAGTTGGAGAAAAGCT...TGTCCCTATGTTGCCGGGAGTTCCTGTTTGAAATATTTGAAGCATAGAGGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp CACCTCATTTTAAGTGACAGTTACACCATGCACCAGAAACCCAGAGAAGTGAAGAGCTTTTCTCCAACTTaGACCAAAGAAGCTAAGGCA +
Preference number: 5 (lower is better)
Translates to: HLILSDSYTMHQKPREVKSFSPT*TKEAKA
Trigger: TGCCTTAGCTTCTTTGGTCAAAGTTGGAGAAAAGCT...CTTCACTTCTCTGGGTTTCTGGTGCATGGTGTAACTGTCACTTAAAATGAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS-3UTR CAA 90 bp CACCTCATTTTAAGTGACAGTTACACCATGCACCAGAAACCCAGAGAAGTGAAGCAAGAACACCTGAATTaGTGTGCTAGTGGCAGAAAA +
Preference number: 5 (lower is better)
Translates to: HLILSDSYTMHQKPREVKQEHLN*CASGRK
Trigger: TTTTCTGCCACTAGCACACAAATTCAGGTGTTCTTG...CTTCACTTCTCTGGGTTTCTGGTGCATGGTGTAACTGTCACTTAAAATGAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CAA 90 bp CACCCTCAATGGGAGAAGGAATTAAACTCCACCTCCTGGGAGAATTTACGTATTATATTCTGTGATTCTTaGTACTCTCAGCTCTGGCAT +
Preference number: 5 (lower is better)
Translates to: HPQWEKELNSTSWENLRIIFCDS*YSQLWH
Trigger: ATGCCAGAGCTGAGAGTACAAAGAATCACAGAATAT...AATACGTAAATTCTCCCAGGAGGTGGAGTTTAATTCCTTCTCCCATTGAGGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296343.10
CDS-3UTR CAA 90 bp AGAATTCAATCCCAGAACAAAAATGATGCAGGCTTTAGTTCACAGAGCTGCCAGTCAGATAGTGGTAACTaGCAAAGTGCTTCCAAAACA +
Preference number: 5 (lower is better)
Translates to: RIQSQNKNDAGFSSQSCQSDSGN*QSASKT
Trigger: TGTTTTGGAAGCACTTTGCAAGTTACCACTATCTGA...CTGGCAGCTCTGTGAACTAAAGCCTGCATCATTTTTGTTCTGGGATTGAATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000296343.10
CDS GCA 90 bp ATCAAGCACATTATGCTAAGGACATACATGATATTCTCCTTGACATaGCAAATATTGTTCTTGAGTTTCCGAGTCCAAACTTTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: IKHIMLRTYMIFSLT*QILFLSFRVQTFLH
Trigger: GTGGAGGAAAGTTTGGACTCGGAAACTCAAGAACAATATTTGGCATGTCAAGGAGAATATCATGTATGTCCTTAGCATAATGTGCTTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472149.1
CDS TCA 72 bp CTCCATTCCCGCGCCCTCCGGCCGCATCCGGGGCGGTaGGGCCGCCTCTTCGCCCAAGAGAGGCGTCCCTGC +
Preference number: 6 (lower is better)
Translates to: LHSRALRPHPGR*GRLFAQERRPC
Trigger: GCAGGGACGCCTCTCTTGGGCGAAGAGGCGGCCTCACCGCCCCGGATGCGGCCGGAGGGCGCGGGAATGGAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296343.10
ENST00000449205.1
ENST00000474214.2
CDS CCA 72 bp CCTCGTAGTCTGACAGGTAAGACTCCAGGCTCTGCCTaGCCAGTGCCTCCCGCCGGGCCTGCAGCCGCTCGC +
Preference number: 6 (lower is better)
Translates to: PRSLTGKTPGSA*PVPPAGPAAAR
Trigger: GCGAGCGGCTGCAGGCCCGGCGGGAGGCACTGGCCAGGCAGAGCCTGGAGTCTTACCTGTCAGACTACGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS TCA 72 bp CAGGGCCAGCGCTTCCGCGGGCTCCTCCTCGTAGTCTaGCAGGTAAGACTCCAGGCTCTGCCTGGCCAGTGC +
Preference number: 6 (lower is better)
Translates to: QGQRFRGLLLVV*QVRLQALPGQC
Trigger: GCACTGGCCAGGCAGAGCCTGGAGTCTTACCTGTCAGACTACGAGGAGGAGCCCGCGGAAGCGCTGGCCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS GCA 72 bp TCTACACTCGCAGGGGTCTGTCCTGCCTCCCGAGGCTaGGTTGCGGTGGGCGCGAAAGGCTCGTGTGTACCG +
Preference number: 6 (lower is better)
Translates to: STLAGVCPASRG*VAVGAKGSCVP
Trigger: CGGTACACACGAGCCTTTCGCGCCCACCGCAACGCAGCCTCGGGAGGCAGGACAGACCCCTGCGAGTGTAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000467303.5
CDS GCA 72 bp TTCTGCAACAGGTGTGACCCGGCCCGGAGGGAGGGCTaGACGTGCTTTCTTCAGGTGGCCTCCAGGACGGCG +
Preference number: 6 (lower is better)
Translates to: FCNRCDPARREG*TCFLQVASRTA
Trigger: CGCCGTCCTGGAGGCCACCTGAAGAAAGCACGTGCAGCCCTCCCTCCGGGCCGGGTCACACCTGTTGCAGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS CAA 72 bp CACTCGCAGGGGTCTGTCCTGCCTCCCGAGGCTGCGTaGCGGTGGGCGCGAAAGGCTCGTGTGTACCGAAGT +
Preference number: 6 (lower is better)
Translates to: HSQGSVLPPEAA*RWARKARVYRS
Trigger: ACTTCGGTACACACGAGCCTTTCGCGCCCACCGCAACGCAGCCTCGGGAGGCAGGACAGACCCCTGCGAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000467303.5
CDS GCA 72 bp ACTCGCAGGGGTCTGTCCTGCCTCCCGAGGCTGCGTTaGGGTGGGCGCGAAAGGCTCGTGTGTACCGAAGTA +
Preference number: 6 (lower is better)
Translates to: TRRGLSCLPRLR*GGRERLVCTEV
Trigger: TACTTCGGTACACACGAGCCTTTCGCGCCCACCGCAACGCAGCCTCGGGAGGCAGGACAGACCCCTGCGAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000467303.5
CDS GCA 72 bp AGCTCCGAGGCGGCTGGAAGCTGCATCCCCTCAAACTaGTTCAGGAGCCCCATGGCCACCGCCTCAGCAGAC +
Preference number: 6 (lower is better)
Translates to: SSEAAGSCIPSN*FRSPMATASAD
Trigger: GTCTGCTGAGGCGGTGGCCATGGGGCTCCTGAAGCAGTTTGAGGGGATGCAGCTTCCAGCCGCCTCGGAGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
ENST00000471364.1
CDS GCA 72 bp GGGACAAGCCACTCCAGCTCCGAGGCGGCTGGAAGCTaGATCCCCTCAAACTGCTTCAGGAGCCCCATGGCC +
Preference number: 6 (lower is better)
Translates to: GTSHSSSEAAGS*IPSNCFRSPMA
Trigger: GGCCATGGGGCTCCTGAAGCAGTTTGAGGGGATGCAGCTTCCAGCCGCCTCGGAGCTGGAGTGGCTTGTCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
ENST00000471364.1
CDS CCA 72 bp CAGGGGTCTGTCCTGCCTCCCGAGGCTGCGTTGCGGTaGGCGCGAAAGGCTCGTGTGTACCGAAGTATAGGG +
Preference number: 6 (lower is better)
Translates to: QGSVLPPEAALR*ARKARVYRSIG
Trigger: CCCTATACTTCGGTACACACGAGCCTTTCGCGCCCACCGCAACGCAGCCTCGGGAGGCAGGACAGACCCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000467303.5
CDS CCA 72 bp AGCTGGCAGTCCGGCCTCGGGGGTCCAAGTTGCCAATaGCCAGGTACTCAGGCCCCTCACTGGCATCACCTG +
Preference number: 6 (lower is better)
Translates to: SWQSGLGGPSCQ*PGTQAPHWHHL
Trigger: CAGGTGATGCCAGTGAGGGGCCTGAGTACCTGGCCATTGGCAACTTGGACCCCCGAGGCCGGACTGCCAGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
ENST00000449205.1
CDS CAA 90 bp TGCAATCTACACTCGCAGGGGTCTGTCCTGCCTCCCGAGGCTGCGTaGCGGTGGGCGCGAAAGGCTCGTGTGTACCGAAGTATAGGGGAC +
Preference number: 6 (lower is better)
Translates to: CNLHSQGSVLPPEAA*RWARKARVYRSIGD
Trigger: GTCCCCTATACTTCGGTACACACGAGCCTTTCGCGCCCACCGCAACGCAGCCTCGGGAGGCAGGACAGACCCCTGCGAGTGTAGATTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000467303.5
CDS TCA 72 bp TCCGTCTGGCGGCGGCACGCCCCTCCCGAGGGAAGCTaGGGTCTTATTAGGGTAGTGAACACCGTGCCAGAT +
Preference number: 6 (lower is better)
Translates to: SVWRRHAPPEGS*GLIRVVNTVPD
Trigger: ATCTGGCACGGTGTTCACTACCCTAATAAGACCTCAGCTTCCCTCGGGAGGGGCGTGCCGCCGCCAGACGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467303.5
CDS CCA 72 bp CTGATATACTGTCTATCCCCGAGCAGGGGCCGGAGCTaGGCTGAGAGGCAGTGGTACTGCAGGCTGTGCTGC +
Preference number: 6 (lower is better)
Translates to: LIYCLSPSRGRS*AERQWYCRLCC
Trigger: GCAGCACAGCCTGCAGTACCACTGCCTCTCAGCCCAGCTCCGGCCCCTGCTCGGGGATAGACAGTATATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000449205.1
ENST00000467303.5
ENST00000474214.2
CDS CCA 72 bp GAAGCTGCATCCCCTCAAACTGCTTCAGGAGCCCCATaGCCACCGCCTCAGCAGACGTGGAGTGCAGGAAGC +
Preference number: 6 (lower is better)
Translates to: EAASPQTASGAP*PPPQQTWSAGS
Trigger: GCTTCCTGCACTCCACGTCTGCTGAGGCGGTGGCCATGGGGCTCCTGAAGCAGTTTGAGGGGATGCAGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
ENST00000471364.1
CDS CAA 90 bp GAAGGCATAAGATTCAGAGGTGCCCGCGGTCTAGCATCCCCCAGTTaGGGCGGAAAGTCGAACTGCTCACAACGGCGGTCCTCGCGAGCG +
Preference number: 6 (lower is better)
Translates to: EGIRFRGARGLASPS*GGKSNCSQRRSSRA
Trigger: CGCTCGCGAGGACCGCCGTTGTGAGCAGTTCGACTTTCCGCCCAAACTGGGGGATGCTAGACCGCGGGCACCTCTGAATCTTATGCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467303.5
CDS TCA 72 bp CTTTGCCCCACTGGTGACAGTGAGTGTCTGCCCCTCTaGGAAGCTGGACCTGCGGAGGACACTGGACAGCTG +
Preference number: 6 (lower is better)
Translates to: LCPTGDSECLPL*EAGPAEDTGQL
Trigger: CAGCTGTCCAGTGTCCTCCGCAGGTCCAGCTTCTCAGAGGGGCAGACACTCACTGTCACCAGTGGGGCAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
ENST00000447048.1
ENST00000449205.1
CDS TCA 72 bp CAGCTCCCCCTTCCTGGTCGCAGTCAGGTCATTCAGTaGGTACAGGTGGAGGTCCTCTGTCAGGTGGCCTGG +
Preference number: 6 (lower is better)
Translates to: QLPLPGRSQVIQ*VQVEVLCQVAW
Trigger: CCAGGCCACCTGACAGAGGACCTCCACCTGTACTCACTGAATGACCTGACTGCGACCAGGAAGGGGGAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
CDS GCA 72 bp GATCTGAGCCAGGAGGCGGGGGTTGTTCTGTTCCACTaGTTCCAGGCACTGCAGCATGGCCGTGACATGAGC +
Preference number: 6 (lower is better)
Translates to: DLSQEAGVVLFH*FQALQHGRDMS
Trigger: GCTCATGTCACGGCCATGCTGCAGTGCCTGGAAGCAGTGGAACAGAACAACCCCCGCCTCCTGGCTCAGATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000449205.1
ENST00000467303.5
ENST00000474214.2
CDS GCA 72 bp GCTCAGCCTCCTGGTACATGGGGAGCAGGTTCTTGGTaGGGATTTGCTGGCGCCGAAGGCGGATCTTCTGCT +
Preference number: 6 (lower is better)
Translates to: AQPPGTWGAGSW*GFAGAEGGSSA
Trigger: AGCAGAAGATCCGCCTTCGGCGCCAGCAAATCCGCACCAAGAACCTGCTCCCCATGTACCAGGAGGCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
CDS CCA 72 bp GGGGTGTATGTGGAACTGGGCAGGGCTGTCAGGCTCTaGCTCTTTGTCACCAGGAGCGGGCTCTCGTGCTTT +
Preference number: 6 (lower is better)
Translates to: GVYVELGRAVRL*LFVTRSGLSCF
Trigger: AAAGCACGAGAGCCCGCTCCTGGTGACAAAGAGCCAGAGCCTGACAGCCCTGCCCAGTTCCACATACACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000449205.1
ENST00000467303.5
CDS CCA 72 bp CGTGCTCAGCCTCCTGGTACATGGGGAGCAGGTTCTTaGTGCGGATTTGCTGGCGCCGAAGGCGGATCTTCT +
Preference number: 6 (lower is better)
Translates to: RAQPPGTWGAGS*CGFAGAEGGSS
Trigger: AGAAGATCCGCCTTCGGCGCCAGCAAATCCGCACCAAGAACCTGCTCCCCATGTACCAGGAGGCTGAGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
CDS CCA 72 bp TCCCACTTGCGCAGAACCCGGCTGGGGATGGCCATCTaGGCATTCTCGTGGCAGCACTGGCAGAAGTACTTG +
Preference number: 6 (lower is better)
Translates to: SHLRRTRLGMAI*AFSWQHWQKYL
Trigger: CAAGTACTTCTGCCAGTGCTGCCACGAGAATGCCCAGATGGCCATCCCCAGCCGGGTTCTGCGCAAGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
CDS CAA 72 bp AGATTCAGAGGTGCCCGCGGTCTAGCATCCCCCAGTTaGGGCGGAAAGTCGAACTGCTCACAACGGCGGTCC +
Preference number: 6 (lower is better)
Translates to: RFRGARGLASPS*GGKSNCSQRRS
Trigger: GGACCGCCGTTGTGAGCAGTTCGACTTTCCGCCCAAACTGGGGGATGCTAGACCGCGGGCACCTCTGAATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467303.5
CDS CAA 90 bp GTGCTCAGCCTCCTGGTACATGGGGAGCAGGTTCTTGGTGCGGATTaGCTGGCGCCGAAGGCGGATCTTCTGCTTCAGCTCCTGGATCTC +
Preference number: 6 (lower is better)
Translates to: VLSLLVHGEQVLGAD*LAPKADLLLQLLDL
Trigger: GAGATCCAGGAGCTGAAGCAGAAGATCCGCCTTCGGCGCCAGCAAATCCGCACCAAGAACCTGCTCCCCATGTACCAGGAGGCTGAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
CDS CAA 90 bp CGAAAGCTTCCGTGCTCAGCCTCCTGGTACATGGGGAGCAGGTTCTaGGTGCGGATTTGCTGGCGCCGAAGGCGGATCTTCTGCTTCAGC +
Preference number: 6 (lower is better)
Translates to: RKLPCSASWYMGSRF*VRICWRRRRIFCFS
Trigger: GCTGAAGCAGAAGATCCGCCTTCGGCGCCAGCAAATCCGCACCAAGAACCTGCTCCCCATGTACCAGGAGGCTGAGCACGGAAGCTTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
CDS GCA 72 bp AAACCCTCCACCGTCGTCTTCAAATTACCCAGCAACTaGCAGTGCTCCCTCCCCTCCCGAGGGAAGCTGAGG +
Preference number: 6 (lower is better)
Translates to: KPSTVVFKLPSN*QCSLPSRGKLR
Trigger: CCTCAGCTTCCCTCGGGAGGGGAGGGAGCACTGGCAGTTGCTGGGTAATTTGAAGACGACGGTGGAGGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273582.9
CDS GCA 72 bp TCCTGGTACATGGGGAGCAGGTTCTTGGTGCGGATTTaGTGGCGCCGAAGGCGGATCTTCTGCTTCAGCTCC +
Preference number: 6 (lower is better)
Translates to: SWYMGSRFLVRI*WRRRRIFCFSS
Trigger: GGAGCTGAAGCAGAAGATCCGCCTTCGGCGCCAGCAAATCCGCACCAAGAACCTGCTCCCCATGTACCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
CDS CCA 72 bp TGGTACATGGGGAGCAGGTTCTTGGTGCGGATTTGCTaGCGCCGAAGGCGGATCTTCTGCTTCAGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: WYMGSRFLVRIC*RRRRIFCFSSW
Trigger: CCAGGAGCTGAAGCAGAAGATCCGCCTTCGGCGCCAGCAAATCCGCACCAAGAACCTGCTCCCCATGTACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
CDS CCA 72 bp CTGGAGGTGACCCGAAAGCTTCCGTGCTCAGCCTCCTaGTACATGGGGAGCAGGTTCTTGGTGCGGATTTGC +
Preference number: 6 (lower is better)
Translates to: LEVTRKLPCSAS*YMGSRFLVRIC
Trigger: GCAAATCCGCACCAAGAACCTGCTCCCCATGTACCAGGAGGCTGAGCACGGAAGCTTTCGGGTCACCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
CDS CAA 72 bp CTCCTGGTACATGGGGAGCAGGTTCTTGGTGCGGATTaGCTGGCGCCGAAGGCGGATCTTCTGCTTCAGCTC +
Preference number: 6 (lower is better)
Translates to: LLVHGEQVLGAD*LAPKADLLLQL
Trigger: GAGCTGAAGCAGAAGATCCGCCTTCGGCGCCAGCAAATCCGCACCAAGAACCTGCTCCCCATGTACCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
CDS GCA 72 bp AAGGTGACGCAGGAACCGTCACTGCAGCGTTTGCTTTaGGTTCAGATGCGGCAGCTCAGCGCAGCTGTAGGT +
Preference number: 6 (lower is better)
Translates to: KVTQEPSLQRLL*VQMRQLSAAVG
Trigger: ACCTACAGCTGCGCTGAGCTGCCGCATCTGAACGCAAAGCAAACGCTGCAGTGACGGTTCCTGCGTCACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000467303.5
CDS GCA 72 bp GGATGGTTTGATCCTCTGCTGGTGAGACGTGCCCTCTaGTTTCTTGAGGTTTCCGGGGAGGGCCAGAGAGTG +
Preference number: 6 (lower is better)
Translates to: GWFDPLLVRRAL*FLEVSGEGQRV
Trigger: CACTCTCTGGCCCTCCCCGGAAACCTCAAGAAAGCAGAGGGCACGTCTCACCAGCAGAGGATCAAACCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
ENST00000449205.1
CDS CAA 72 bp GGAGTTAAGGTGACGCAGGAACCGTCACTGCAGCGTTaGCTTTGCGTTCAGATGCGGCAGCTCAGCGCAGCT +
Preference number: 6 (lower is better)
Translates to: GVKVTQEPSLQR*LCVQMRQLSAA
Trigger: AGCTGCGCTGAGCTGCCGCATCTGAACGCAAAGCAAACGCTGCAGTGACGGTTCCTGCGTCACCTTAACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000467303.5
CDS TCA 72 bp CTCGTGCACGCTGATGAACTTCTCCACGTGAAGGGCTaGGTGGGGACTGAGCCACCGGATGTCTTTCACGAA +
Preference number: 6 (lower is better)
Translates to: LVHADELLHVKG*VGTEPPDVFHE
Trigger: TTCGTGAAAGACATCCGGTGGCTCAGTCCCCACTCAGCCCTTCACGTGGAGAAGTTCATCAGCGTGCACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000449205.1
ENST00000467303.5
ENST00000474214.2
CDS TCA 72 bp TCTGTTCCACTGCTTCCAGGCACTGCAGCATGGCCGTaGCATGAGCGTCACTTAGCAGGAAGGCAGCATCTG +
Preference number: 6 (lower is better)
Translates to: SVPLLPGTAAWP*HERHLAGRQHL
Trigger: CAGATGCTGCCTTCCTGCTAAGTGACGCTCATGTCACGGCCATGCTGCAGTGCCTGGAAGCAGTGGAACAGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000449205.1
ENST00000467303.5
ENST00000474214.2
CDS TCA 72 bp CTCTCGTGCTTTCTGGCAAACATGGACGCATCGATCTaGGCCAGGAGGCGGGGGTTGTTCTGTTCCACTGCT +
Preference number: 6 (lower is better)
Translates to: LSCFLANMDASI*ARRRGLFCSTA
Trigger: AGCAGTGGAACAGAACAACCCCCGCCTCCTGGCTCAGATCGATGCGTCCATGTTTGCCAGAAAGCACGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000449205.1
ENST00000467303.5
CDS GCA 72 bp TGGAGGAGAACAAATTGGAACTGCTGCTCTCGGCATTaGTGCTGTGACTCTGACAGCTGGCAGTCCGGCCTC +
Preference number: 6 (lower is better)
Translates to: WRRTNWNCCSRH*CCDSDSWQSGL
Trigger: GAGGCCGGACTGCCAGCTGTCAGAGTCACAGCAGCAATGCCGAGAGCAGCAGTTCCAATTTGTTCTCCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
ENST00000449205.1
CDS GCA 72 bp AAATTATCTGAGGCCGGGGCGGGGCCCACTCCAAGTTaGCACGAACACGAATCCGCAGCTTGTAGATGTCAG +
Preference number: 6 (lower is better)
Translates to: KLSEAGAGPTPS*HEHESAACRCQ
Trigger: CTGACATCTACAAGCTGCGGATTCGTGTTCGTGGCAACTTGGAGTGGGCCCCGCCCCGGCCTCAGATAATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
CDS CCA 72 bp GCTGAGCATAGCTGTTTGGAGGGGTGTATGTGGAACTaGGCAGGGCTGTCAGGCTCTGGCTCTTTGTCACCA +
Preference number: 6 (lower is better)
Translates to: AEHSCLEGCMWN*AGLSGSGSLSP
Trigger: TGGTGACAAAGAGCCAGAGCCTGACAGCCCTGCCCAGTTCCACATACACCCCTCCAAACAGCTATGCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000449205.1
ENST00000467303.5
CDS CCA 72 bp TTCCTGGTCGCAGTCAGGTCATTCAGTGAGTACAGGTaGAGGTCCTCTGTCAGGTGGCCTGGGACTGTGTCA +
Preference number: 6 (lower is better)
Translates to: FLVAVRSFSEYR*RSSVRWPGTVS
Trigger: TGACACAGTCCCAGGCCACCTGACAGAGGACCTCCACCTGTACTCACTGAATGACCTGACTGCGACCAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
CDS CCA 72 bp CTAGCAGCCGGTGTTCCTCATTACCTGGAGCTCCCCTaGAGGCAATGCTGGTATCCGAATGGGAGCGAATGT +
Preference number: 6 (lower is better)
Translates to: LAAGVPHYLELP*RQCWYPNGSEC
Trigger: ACATTCGCTCCCATTCGGATACCAGCATTGCCTCCAGGGGAGCTCCAGGTAATGAGGAACACCGGCTGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS CCA 72 bp GAGTCAGAGAGCTGTGCCGAATCACGTGAGCTGAACTaGGAGCTGCTGGAGGTGACCCGAAAGCCTGTTATG +
Preference number: 6 (lower is better)
Translates to: ESESCAESRELN*ELLEVTRKPVM
Trigger: CATAACAGGCTTTCGGGTCACCTCCAGCAGCTCCCAGTTCAGCTCACGTGATTCGGCACAGCTCTCTGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471364.1
CDS TCA 72 bp CCTGCAGCCGCTCGCAGCGCGGACAGCTTCCAGACTTaGAGCAGGCTTTATGGTAACACGCTTTACACTCTT +
Preference number: 6 (lower is better)
Translates to: PAAARSADSFQT*SRLYGNTLYTL
Trigger: AAGAGTGTAAAGCGTGTTACCATAAAGCCTGCTTCAAGTCTGGAAGCTGTCCGCGCTGCGAGCGGCTGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
CDS GCA 72 bp TTGGTGCGGATTTGCTGGCGCCGAAGGCGGATCTTCTaGTTCAGCTCCTGGATCTCTCTATCACTGTCTTCC +
Preference number: 6 (lower is better)
Translates to: LVRICWRRRRIF*FSSWISLSLSS
Trigger: GGAAGACAGTGATAGAGAGATCCAGGAGCTGAAGCAGAAGATCCGCCTTCGGCGCCAGCAAATCCGCACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
CDS CCA 72 bp AGGAATGCTGAGCATAGCTGTTTGGAGGGGTGTATGTaGAACTGGGCAGGGCTGTCAGGCTCTGGCTCTTTG +
Preference number: 6 (lower is better)
Translates to: RNAEHSCLEGCM*NWAGLSGSGSL
Trigger: CAAAGAGCCAGAGCCTGACAGCCCTGCCCAGTTCCACATACACCCCTCCAAACAGCTATGCTCAGCATTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000449205.1
ENST00000467303.5
CDS CCA 72 bp TCCGGATGCCACATCCTGCACAGCGGTAATTCTGCTTaGCCACGGCAATTTTCCTCGTTGGGGCTGGATGAA +
Preference number: 6 (lower is better)
Translates to: SGCHILHSGNSA*PRQFSSLGLDE
Trigger: TTCATCCAGCCCCAACGAGGAAAATTGCCGTGGCCAAGCAGAATTACCGCTGTGCAGGATGTGGCATCCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
CDS CCA 72 bp ACCGACCACCTTCTGGAGCTCCCCTGGAGGCAATGCTaGTATCCGAATGGGAGCGAATGTGGCTTTTCTTTG +
Preference number: 6 (lower is better)
Translates to: TDHLLELPWRQC*YPNGSECGFSL
Trigger: CAAAGAAAAGCCACATTCGCTCCCATTCGGATACCAGCATTGCCTCCAGGGGAGCTCCAGAAGGTGGTCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447048.1
CDS CAA 72 bp CAAAGCCGCTCCAAGCCACCATACTTAGACCAGACGTaGGGGCTGTTGGTTGATACCAAACCCTCCACCGTC +
Preference number: 6 (lower is better)
Translates to: QSRSKPPYLDQT*GLLVDTKPSTV
Trigger: GACGGTGGAGGGTTTGGTATCAACCAACAGCCCCAACGTCTGGTCTAAGTATGGTGGCTTGGAGCGGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000449205.1
CDS CAA 72 bp ATCTGGGCATTCTCGTGGCAGCACTGGCAGAAGTACTaGCCCAGGTACTCACAGTACCGCAGTCGCTTGATG +
Preference number: 6 (lower is better)
Translates to: IWAFSWQHWQKY*PRYSQYRSRLM
Trigger: CATCAAGCGACTGCGGTACTGTGAGTACCTGGGCAAGTACTTCTGCCAGTGCTGCCACGAGAATGCCCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
CDS TCA 72 bp CAGGAGGGACTCGAAGGACACGGAGGATTATATCACTaGAGGCATAAGATTCAGAGGTGCCCGCGGTCTAGC +
Preference number: 6 (lower is better)
Translates to: QEGLEGHGGLYH*RHKIQRCPRSS
Trigger: GCTAGACCGCGGGCACCTCTGAATCTTATGCCTTCAGTGATATAATCCTCCGTGTCCTTCGAGTCCCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000467303.5
CDS GCA 72 bp AAAGGCTCGTGTGTACCGAAGTATAGGGGACCTGTCTaGAGCAGGAGGGACTCGAAGGACACGGAGGATTAT +
Preference number: 6 (lower is better)
Translates to: KGSCVPKYRGPV*SRRDSKDTEDY
Trigger: ATAATCCTCCGTGTCCTTCGAGTCCCTCCTGCTGCAGACAGGTCCCCTATACTTCGGTACACACGAGCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000467303.5
CDS GCA 72 bp CTAAGGAAGAGGCAGCAGAATCTGGCTTCTGGGAGCTaGTGGAGGAGAACAAATTGGAACTGCTGCTCTCGG +
Preference number: 6 (lower is better)
Translates to: LRKRQQNLASGS*WRRTNWNCCSR
Trigger: CCGAGAGCAGCAGTTCCAATTTGTTCTCCTCCAGCAGCTCCCAGAAGCCAGATTCTGCTGCCTCTTCCTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
ENST00000449205.1
CDS CCA 72 bp GAAGGACCCAAAGTAGGAATGCTGAGCATAGCTGTTTaGAGGGGTGTATGTGGAACTGGGCAGGGCTGTCAG +
Preference number: 6 (lower is better)
Translates to: EGPKVGMLSIAV*RGVCGTGQGCQ
Trigger: CTGACAGCCCTGCCCAGTTCCACATACACCCCTCCAAACAGCTATGCTCAGCATTCCTACTTTGGGTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000449205.1
ENST00000467303.5
CDS CCA 72 bp TCATTCAGTGAGTACAGGTGGAGGTCCTCTGTCAGGTaGCCTGGGACTGTGTCAAAGGAATCCAGAAGCTCC +
Preference number: 6 (lower is better)
Translates to: SFSEYRWRSSVR*PGTVSKESRSS
Trigger: GGAGCTTCTGGATTCCTTTGACACAGTCCCAGGCCACCTGACAGAGGACCTCCACCTGTACTCACTGAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
CDS CAA 72 bp CATGTACAGAGAGCTGGGTGTGCTGACTTCACTGCTTaGACCAGAGTAGGGCAAAGGGCCTCTCAACTTCGC +
Preference number: 6 (lower is better)
Translates to: HVQRAGCADFTA*TRVGQRASQLR
Trigger: GCGAAGTTGAGAGGCCCTTTGCCCTACTCTGGTCAAAGCAGTGAAGTCAGCACACCCAGCTCTCTGTACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000415452.5
CDS CAA 72 bp ATTCTCCTTTTCCAGGTCGGCACAGCTGCCGAAGTCTaGCTCAGAGAGGTAGCTGATGAGGGACTGTCCTTC +
Preference number: 6 (lower is better)
Translates to: ILLFQVGTAAEV*LREVADEGLSF
Trigger: GAAGGACAGTCCCTCATCAGCTACCTCTCTGAGCAAGACTTCGGCAGCTGTGCCGACCTGGAAAAGGAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
ENST00000447048.1
CDS CAA 90 bp ATTTACTTTGGAGTTAAGGTGACGCAGGAACCGTCACTGCAGCGTTaGCTTTGCGTTCAGATGCGGCAGCTCAGCGCAGCTGTAGGTGGA +
Preference number: 6 (lower is better)
Translates to: IYFGVKVTQEPSLQR*LCVQMRQLSAAVGG
Trigger: TCCACCTACAGCTGCGCTGAGCTGCCGCATCTGAACGCAAAGCAAACGCTGCAGTGACGGTTCCTGCGTCACCTTAACTCCAAAGTAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000467303.5
CDS CAA 90 bp CAAAGCCGCTCCAAGCCACCATACTTAGACCAGACGTTGGGGCTGTaGGTTGATACCAAACCCTCCACCGTCGTCTTCAAATTACCCAGC +
Preference number: 6 (lower is better)
Translates to: QSRSKPPYLDQTLGL*VDTKPSTVVFKLPS
Trigger: GCTGGGTAATTTGAAGACGACGGTGGAGGGTTTGGTATCAACCAACAGCCCCAACGTCTGGTCTAAGTATGGTGGCTTGGAGCGGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000449205.1
CDS CAA 90 bp ATGTCCCTGCAAAGCCGCTCCAAGCCACCATACTTAGACCAGACGTaGGGGCTGTTGGTTGATACCAAACCCTCCACCGTCGTCTTCAAA +
Preference number: 6 (lower is better)
Translates to: MSLQSRSKPPYLDQT*GLLVDTKPSTVVFK
Trigger: TTTGAAGACGACGGTGGAGGGTTTGGTATCAACCAACAGCCCCAACGTCTGGTCTAAGTATGGTGGCTTGGAGCGGCTTTGCAGGGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000449205.1
CDS TCA 72 bp AGGAATCCAGAAGCTCCTTGGCCAGTCGGCAAGTCTTaGACATGTTCTTCATGTGACACAGCTGGACCCGCA +
Preference number: 6 (lower is better)
Translates to: RNPEAPWPVGKS*TCSSCDTAGPA
Trigger: TGCGGGTCCAGCTGTGTCACATGAAGAACATGTTCAAGACTTGCCGACTGGCCAAGGAGCTTCTGGATTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
CDS CCA 72 bp GTTCCTCATTACCTGGAGCTCCCCTGGAGGCAATGCTaGTATCCGAATGGGAGCGAATGTGGCTTTTCTTTG +
Preference number: 6 (lower is better)
Translates to: VPHYLELPWRQC*YPNGSECGFSL
Trigger: CAAAGAAAAGCCACATTCGCTCCCATTCGGATACCAGCATTGCCTCCAGGGGAGCTCCAGGTAATGAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449205.1
CDS CAA 72 bp AGAAGGACCCAAAGTAGGAATGCTGAGCATAGCTGTTaGGAGGGGTGTATGTGGAACTGGGCAGGGCTGTCA +
Preference number: 6 (lower is better)
Translates to: RRTQSRNAEHSC*EGCMWNWAGLS
Trigger: TGACAGCCCTGCCCAGTTCCACATACACCCCTCCAAACAGCTATGCTCAGCATTCCTACTTTGGGTCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000449205.1
ENST00000467303.5
CDS TCA 72 bp GCCACCATACTTAGACCAGACGTTGGGGCTGTTGGTTaGTACCAAACCCTCCACCGTCGTCTTCAAATTACC +
Preference number: 6 (lower is better)
Translates to: ATILRPDVGAVG*YQTLHRRLQIT
Trigger: GGTAATTTGAAGACGACGGTGGAGGGTTTGGTATCAACCAACAGCCCCAACGTCTGGTCTAAGTATGGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000449205.1
CDS GCA 72 bp CTTGATGTAATCAGGGTCAGTCCGGATGCCACATCCTaGACAGCGGTAATTCTGCTTGGCCACGGCAATTTT +
Preference number: 6 (lower is better)
Translates to: LDVIRVSPDATS*TAVILLGHGNF
Trigger: AAAATTGCCGTGGCCAAGCAGAATTACCGCTGTGCAGGATGTGGCATCCGGACTGACCCTGATTACATCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
CDS CAA 72 bp TCCAAGCCACCATACTTAGACCAGACGTTGGGGCTGTaGGTTGATACCAAACCCTCCACCGTCGTCTTCAAA +
Preference number: 6 (lower is better)
Translates to: SKPPYLDQTLGL*VDTKPSTVVFK
Trigger: TTTGAAGACGACGGTGGAGGGTTTGGTATCAACCAACAGCCCCAACGTCTGGTCTAAGTATGGTGGCTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000449205.1
CDS GCA 72 bp CCACTTCCTCCTCCTCTAGGCACTGGCTCATCATGTTaGACTTCATTAGCTCGATGGCAGCAATTAAGGACT +
Preference number: 6 (lower is better)
Translates to: PLPPPLGTGSSC*TSLARWQQLRT
Trigger: AGTCCTTAATTGCTGCCATCGAGCTAATGAAGTGCAACATGATGAGCCAGTGCCTAGAGGAGGAGGAAGTGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
ENST00000447048.1
CDS CAA 72 bp GGTCTTATTAGGGTAGTGAACACCGTGCCAGATGTTTaGAGAGTGCCGATTGAGAGAAGGTACAGACACGGG +
Preference number: 6 (lower is better)
Translates to: GLIRVVNTVPDV*RVPIERRYRHG
Trigger: CCCGTGTCTGTACCTTCTCTCAATCGGCACTCTCAAAACATCTGGCACGGTGTTCACTACCCTAATAAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000467303.5
CDS CAA 72 bp TCCACTTCCTCCTCCTCTAGGCACTGGCTCATCATGTaGCACTTCATTAGCTCGATGGCAGCAATTAAGGAC +
Preference number: 6 (lower is better)
Translates to: STSSSSRHWLIM*HFISSMAAIKD
Trigger: GTCCTTAATTGCTGCCATCGAGCTAATGAAGTGCAACATGATGAGCCAGTGCCTAGAGGAGGAGGAAGTGGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000413360.5
ENST00000415452.5
ENST00000447048.1
CDS TCA 72 bp TCTTCCTATATTGTTATGTCCCCTCCCGAGGGAAGCTaGGGTCTTATTAGGGTAGTGAACACCGTGCCAGAT +
Preference number: 6 (lower is better)
Translates to: SSYIVMSPPEGS*GLIRVVNTVPD
Trigger: ATCTGGCACGGTGTTCACTACCCTAATAAGACCTCAGCTTCCCTCGGGAGGGGACATAACAATATAGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472149.1
CDS CAA 90 bp TTCATATTCCATGTACAGAGAGCTGGGTGTGCTGACTTCACTGCTTaGACCAGAGTAGGGCAAAGGGCCTCTCAACTTCGCCTTATCATT +
Preference number: 6 (lower is better)
Translates to: FIFHVQRAGCADFTA*TRVGQRASQLRLII
Trigger: AATGATAAGGCGAAGTTGAGAGGCCCTTTGCCCTACTCTGGTCAAAGCAGTGAAGTCAGCACACCCAGCTCTCTGTACATGGAATATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273582.9
ENST00000296343.10
ENST00000415452.5
CDS TCA 72 bp AGTGAACACCGTGCCAGATGTTTTGAGAGTGCCGATTaGGAGAAGGTACAGACACGGGAAACGTTAGCATTT +
Preference number: 6 (lower is better)
Translates to: SEHRARCFESAD*EKVQTRETLAF
Trigger: AAATGCTAACGTTTCCCGTGTCTGTACCTTCTCTCAATCGGCACTCTCAAAACATCTGGCACGGTGTTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273582.9
ENST00000467303.5
CDS TCA 72 bp GAGGCCAGTGACACTGACAGTCCGTTCTTTGATATGTaGGTCAGGTTAGATCCTTCGCTACCATCTTGGATT +
Preference number: 6 (lower is better)
Translates to: EASDTDSPFFDM*VRLDPSLPSWI
Trigger: AATCCAAGATGGTAGCGAAGGATCTAACCTGACTCACATATCAAAGAACGGACTGTCAGTGTCACTGGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415452.5
CDS CAA 72 bp AGGACATACATGATATTCTCCTTGACATGCCAAATATaGTTCTTGAGTTTCCGAGTCCAAACTTTCCTCCAC +
Preference number: 6 (lower is better)
Translates to: RTYMIFSLTCQI*FLSFRVQTFLH
Trigger: GTGGAGGAAAGTTTGGACTCGGAAACTCAAGAACAATATTTGGCATGTCAAGGAGAATATCATGTATGTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472149.1
CDS CAA 72 bp AAGCACATTATGCTAAGGACATACATGATATTCTCCTaGACATGCCAAATATTGTTCTTGAGTTTCCGAGTC +
Preference number: 6 (lower is better)
Translates to: KHIMLRTYMIFS*TCQILFLSFRV
Trigger: GACTCGGAAACTCAAGAACAATATTTGGCATGTCAAGGAGAATATCATGTATGTCCTTAGCATAATGTGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472149.1
CDS CAA 90 bp AGTAAAATCAAGCACATTATGCTAAGGACATACATGATATTCTCCTaGACATGCCAAATATTGTTCTTGAGTTTCCGAGTCCAAACTTTC +
Preference number: 6 (lower is better)
Translates to: SKIKHIMLRTYMIFS*TCQILFLSFRVQTF
Trigger: GAAAGTTTGGACTCGGAAACTCAAGAACAATATTTGGCATGTCAAGGAGAATATCATGTATGTCCTTAGCATAATGTGCTTGATTTTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472149.1