RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RTTN (Homo sapiens)

Ensembl gene IDs: ENSG00000176225

Ensembl transcript IDs: ENST00000255674.11, ENST00000578780.2, ENST00000579021.1, ENST00000579986.6, ENST00000580034.2, ENST00000581161.5, ENST00000581583.1, ENST00000581709.1, ENST00000583043.5, ENST00000638251.1, ENST00000638799.1, ENST00000639128.1, ENST00000639487.1, ENST00000640376.1, ENST00000640408.1, ENST00000640525.1, ENST00000640654.1, ENST00000640736.1, ENST00000640769.2, ENST00000640931.1, ENST00000677824.1, ENST00000679113.1

Found 1763 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGAAGAATGTTCACCACAGTTCCCCAGAGCCCACCGGAAATGTTCTaGCAACTGTTTGCTAAGGCCACACAGCCCGTTTCAAGGGTGGTC +
Preference number: 1 (lower is better)
Translates to: RRMFTTVPQSPPEMF*QLFAKATQPVSRVV
Trigger: GACCACCCTTGAAACGGGCTGTGTGGCCTTAGCAAACAGTTGTCAGAACATTTCCGGTGGGCTCTGGGGAACTGTGGTGAACATTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
3UTR TCA 90 bp ATTCTGAAGAATAAATGCCGCCTCCCGGCGCACCATACTACATTCTaGCTGGTCCAGAAGAATGTTCACCACAGTTCCCCAGAGCCCACC +
Preference number: 1 (lower is better)
Translates to: ILKNKCRLPAHHTTF*LVQKNVHHSSPEPT
Trigger: GGTGGGCTCTGGGGAACTGTGGTGAACATTCTTCTGGACCAGTCAGAATGTAGTATGGTGCGCCGGGAGGCGGCATTTATTCTTCAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
3UTR CCA 90 bp GAACAGAAAGGAATTGCAAGCTGGCAGTATACAGGGCAGGACACGTaGCAGACAAGCCTGCACATGTGCAGAACATATCAATCGCCGCTG +
Preference number: 1 (lower is better)
Translates to: EQKGIASWQYTGQDT*QTSLHMCRTYQSPL
Trigger: CAGCGGCGATTGATATGTTCTGCACATGTGCAGGCTTGTCTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAATTCCTTTCTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR TCA 90 bp GCCACCGTTGTTTCTGAGGTGGAGAGAGAACTTGGATCTCGATCCTaGCTTGTCCTAGATGGAGCCCTCCAAAACTTGAATGAGTCATCT +
Preference number: 1 (lower is better)
Translates to: ATVVSEVERELGSRS*LVLDGALQNLNESS
Trigger: AGATGACTCATTCAAGTTTTGGAGGGCTCCATCTAGGACAAGTCAGGATCGAGATCCAAGTTCTCTCTCCACCTCAGAAACAACGGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
ENST00000679113.1
3UTR TCA 90 bp TCATGGGAGGCTTCAGGTAGAAGTGTTGTTGACTGCACAAGTGGCTaGAATTCAGTACTCCCCAATGAAGGTGCCACCGTTGTTTCTGAG +
Preference number: 1 (lower is better)
Translates to: SWEASGRSVVDCTSG*NSVLPNEGATVVSE
Trigger: CTCAGAAACAACGGTGGCACCTTCATTGGGGAGTACTGAATTTCAGCCACTTGTGCAGTCAACAACACTTCTACCTGAAGCCTCCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
ENST00000679113.1
3UTR TCA 90 bp TCATGCGACAAGGCCAGGTTTGAAAGAAGCATAAAAACCATCTGCTaGACCGTGGTGTTCTCCAGTGGCATCTGGGAAGCCAACTTTAGG +
Preference number: 1 (lower is better)
Translates to: SCDKARFERSIKTIC*TVVFSSGIWEANFR
Trigger: CCTAAAGTTGGCTTCCCAGATGCCACTGGAGAACACCACGGTTCAGCAGATGGTTTTTATGCTTCTTTCAAACCTGGCCTTGTCGCATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR GCA 90 bp GGAAAAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTaGCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCA +
Preference number: 1 (lower is better)
Translates to: GKGTESCQLLLLLES*HNWTVLEYHQFSLS
Trigger: TGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
3UTR CCA 90 bp CTGTCATCATCAATCGTCCCTGAAGCAGGTATAACAGAATGGCCTTaGCAGCAGTGTTCACCTGCTCAACAACACAGACCCGATAAACCA +
Preference number: 1 (lower is better)
Translates to: LSSSIVPEAGITEWP*QQCSPAQQHRPDKP
Trigger: TGGTTTATCGGGTCTGTGTTGTTGAGCAGGTGAACACTGCTGCCAAGGCCATTCTGTTATACCTGCTTCAGGGACGATTGATGATGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638251.1
3UTR CCA 90 bp TCAATGCTGTCATCATCAATCGTCCCTGAAGCAGGTATAACAGAATaGCCTTGGCAGCAGTGTTCACCTGCTCAACAACACAGACCCGAT +
Preference number: 1 (lower is better)
Translates to: SMLSSSIVPEAGITE*PWQQCSPAQQHRPD
Trigger: ATCGGGTCTGTGTTGTTGAGCAGGTGAACACTGCTGCCAAGGCCATTCTGTTATACCTGCTTCAGGGACGATTGATGATGACAGCATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638251.1
3UTR TCA 90 bp CACGGCTCCTCTATGTGTAGCTTGAACAGGGTGTTGTCCACAACTTaGCCAACAAAGAGAACTGCAACCTCTACTCCTTGTCTTTGCTCA +
Preference number: 1 (lower is better)
Translates to: HGSSMCSLNRVLSTT*PTKRTATSTPCLCS
Trigger: TGAGCAAAGACAAGGAGTAGAGGTTGCAGTTCTCTTTGTTGGTCAAGTTGTGGACAACACCCTGTTCAAGCTACACATAGAGGAGCCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679113.1
3UTR CCA 90 bp ACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTaGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGA +
Preference number: 1 (lower is better)
Translates to: TESCQLLLLLESCHN*TVLEYHQFSLSWER
Trigger: TCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
3UTR CCA 90 bp GAATCACAAGGTCAGGCTCCACCAATAAACATGACTGCAGAAGCCTaGACAAAGAGGATAGGTATTCCAGGAGAAAGGAAACCTGAGCCT +
Preference number: 1 (lower is better)
Translates to: ESQGQAPPINMTAEA*TKRIGIPGERKPEP
Trigger: AGGCTCAGGTTTCCTTTCTCCTGGAATACCTATCCTCTTTGTCCAGGCTTCTGCAGTCATGTTTATTGGTGGAGCCTGACCTTGTGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
3UTR TCA 90 bp CCTCCCAGGTTGAAGAGATTCTCGTGCCTCAGCCACTGGAGTAGCTaGGATTATAGACGCTCAAGACCAGGAATGGCTAATTTTTGTATT +
Preference number: 1 (lower is better)
Translates to: PPRLKRFSCLSHWSS*DYRRSRPGMANFCI
Trigger: AATACAAAAATTAGCCATTCCTGGTCTTGAGCGTCTATAATCTCAGCTACTCCAGTGGCTGAGGCACGAGAATCTCTTCAACCTGGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000578780.2
ENST00000639487.1
ENST00000640769.2
3UTR TCA 90 bp TCAATAAACTTGTTCCAGGTCAATGCTGTCATCATCAATCGTCCCTaGAGCAGGTATAACAGAATGGCCTTGGCAGCAGTGTTCACCTGC +
Preference number: 1 (lower is better)
Translates to: SINLFQVNAVIINRP*SRYNRMALAAVFTC
Trigger: GCAGGTGAACACTGCTGCCAAGGCCATTCTGTTATACCTGCTTCAGGGACGATTGATGATGACAGCATTGACCTGGAACAAGTTTATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638251.1
3UTR GCA 90 bp GAAGCATCTCTTCTGTGTCAGAACTTGCTTTGCTTAGAAGGAGAATaGAGTTACCCAGAGGATCTTCTGTGTCGGCATAGCCCTGTAGTA +
Preference number: 1 (lower is better)
Translates to: EASLLCQNLLCLEGE*SYPEDLLCRHSPVV
Trigger: TACTACAGGGCTATGCCGACACAGAAGATCCTCTGGGTAACTGCATTCTCCTTCTAAGCAAAGCAAGTTCTGACACAGAAGAGATGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
3UTR TCA 90 bp TCAATAAACTTGTTCCAGGTCAATGCTGTCATCATCAATCGTCCCTaGAGCAGGTATAACAGAATGGCCTTGGCAGCAGTGTTCACCTCA +
Preference number: 1 (lower is better)
Translates to: SINLFQVNAVIINRP*SRYNRMALAAVFTS
Trigger: TGAGGTGAACACTGCTGCCAAGGCCATTCTGTTATACCTGCTTCAGGGACGATTGATGATGACAGCATTGACCTGGAACAAGTTTATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581161.5
3UTR GCA 90 bp AGAAGCCTGGACAAAGAGGATAGGTATTCCAGGAGAAAGGAAACCTaGATAGGTTGGAATCTATGTCAGAGACCTTGGACAAGTCACTCA +
Preference number: 1 (lower is better)
Translates to: RSLDKEDRYSRRKET*IGWNLCQRPWTSHS
Trigger: TGAGTGACTTGTCCAAGGTCTCTGACATAGATTCCAACCTATGCAGGTTTCCTTTCTCCTGGAATACCTATCCTCTTTGTCCAGGCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679113.1
3UTR CCA 90 bp GACAAAGAGGATAGGTATTCCAGGAGAAAGGAAACCTGCATAGGTTaGAATCTATGTCAGAGACCTTGGACAAGTCACTCATCTCTCTGG +
Preference number: 1 (lower is better)
Translates to: DKEDRYSRRKETCIG*NLCQRPWTSHSSLW
Trigger: CCAGAGAGATGAGTGACTTGTCCAAGGTCTCTGACATAGATTCCAACCTATGCAGGTTTCCTTTCTCCTGGAATACCTATCCTCTTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679113.1
3UTR TCA 90 bp GCAAGGTATCAAAAAGAGCAATCAGTTCTTTCTGAAGTTGTTGCCTaGCAGCAGTCCGGATATCATCTGTTTCTTCTCGTGCCTGTGACT +
Preference number: 1 (lower is better)
Translates to: ARYQKEQSVLSEVVA*QQSGYHLFLLVPVT
Trigger: AGTCACAGGCACGAGAAGAAACAGATGATATCCGGACTGCTGTCAGGCAACAACTTCAGAAAGAACTGATTGCTCTTTTTGATACCTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
3UTR TCA 90 bp TCCTCTTCTCCCCAGAATCAATGTTCACTCCTTAGAGACTGGGGGTaGTATCACCTTGTTGAGCTTGTCCAGTCTAACCTAATAAGCTTA +
Preference number: 1 (lower is better)
Translates to: SSSPQNQCSLLRDWG*YHLVELVQSNLISL
Trigger: TAAGCTTATTAGGTTAGACTGGACAAGCTCAACAAGGTGATATCACCCCCAGTCTCTAAGGAGTGAACATTGATTCTGGGGAGAAGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639487.1
3UTR GCA 90 bp TGTTTTTGCCTTCTGATAATTGTAAATCAGAGCCCAAAGGGCAGCTaGTCCAATCCTCTGAGCATTTTGATTCTCACTTTCCAGACAGGC +
Preference number: 1 (lower is better)
Translates to: CFCLLIIVNQSPKGS*SNPLSILILTFQTG
Trigger: GCCTGTCTGGAAAGTGAGAATCAAAATGCTCAGAGGATTGGAGCAGCTGCCCTTTGGGCTCTGATTTACAATTATCAGAAGGCAAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR CCA 90 bp TCTATTAGAGGACGCTTTGTATCAGCCCCTTCTTCACTGGTAAGATaGAATGCTAAAAGCTTTAATGCTAGCGAACGGACCGATGGCTTT +
Preference number: 1 (lower is better)
Translates to: SIRGRFVSAPSSLVR*NAKSFNASERTDGF
Trigger: AAAGCCATCGGTCCGTTCGCTAGCATTAAAGCTTTTAGCATTCCATCTTACCAGTGAAGAAGGGGCTGATACAAAGCGTCCTCTAATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
3UTR TCA 90 bp CACGGCTCCTCTATGTGTAGCTTGAACAGGGTGTTGTCCACAACTTaGCCAACAAAGAGAACTGCAACCATTTGGAAAATTTGCAGTATA +
Preference number: 1 (lower is better)
Translates to: HGSSMCSLNRVLSTT*PTKRTATIWKICSI
Trigger: TATACTGCAAATTTTCCAAATGGTTGCAGTTCTCTTTGTTGGTCAAGTTGTGGACAACACCCTGTTCAAGCTACACATAGAGGAGCCGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
3UTR TCA 90 bp AGAATTCCAATGATATTGGTGATAAGAGGTTTCACAAGCTCATCCTaGATCACAAGGTCAGGCTCCACCAATAAACATGACTGCAGAAGC +
Preference number: 1 (lower is better)
Translates to: RIPMILVIRGFTSSS*ITRSGSTNKHDCRS
Trigger: GCTTCTGCAGTCATGTTTATTGGTGGAGCCTGACCTTGTGATTCAGGATGAGCTTGTGAAACCTCTTATCACCAATATCATTGGAATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
3UTR TCA 90 bp ATTTGCAGTATAGACACAAAGGAGCTGCAGAGAAATTTGCATCAATaGATCATCCATCAAAATCCAAGGCCAGAGAGAGTGCAAGACAGG +
Preference number: 1 (lower is better)
Translates to: ICSIDTKELQRNLHQ*IIHQNPRPERVQDR
Trigger: CCTGTCTTGCACTCTCTCTGGCCTTGGATTTTGATGGATGATTCATTGATGCAAATTTCTCTGCAGCTCCTTTGTGTCTATACTGCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR GCA 90 bp AATATTAAGGAAACTCTGAATAACACGGTCAAAAGAGAAGACTGTTaGGAGAGCGAAACACGCATGACTGGATCACCACATAAAACCTTC +
Preference number: 1 (lower is better)
Translates to: NIKETLNNTVKREDC*ESETRMTGSPHKTF
Trigger: GAAGGTTTTATGTGGTGATCCAGTCATGCGTGTTTCGCTCTCGCAACAGTCTTCTCTTTTGACCGTGTTATTCAGAGTTTCCTTAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
3UTR TCA 90 bp GTTTTAGTTTCAGAGTTCATTTGCTTCAACAGATTATCACTCCCATaGTACCATGACAGGTTCCAAGCTATTCTCAGCATATCTGACACC +
Preference number: 1 (lower is better)
Translates to: VLVSEFICFNRLSLP*YHDRFQAILSISDT
Trigger: GGTGTCAGATATGCTGAGAATAGCTTGGAACCTGTCATGGTATCATGGGAGTGATAATCTGTTGAAGCAAATGAACTCTGAAACTAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
3UTR GCA 90 bp GATTCTTCTCTCCCTCTTTCCCAATATCAGACAGGAAGTTACAGGTaGATTCAATTGAATAAACGGCCTCTGCAGTTCGTTTATAAATAC +
Preference number: 1 (lower is better)
Translates to: DSSLPLSQYQTGSYR*IQLNKRPLQFVYKY
Trigger: GTATTTATAAACGAACTGCAGAGGCCGTTTATTCAATTGAATGCACCTGTAACTTCCTGTCTGATATTGGGAAAGAGGGAGAGAAGAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581161.5
3UTR GCA 90 bp TCTGTTAGTAAGTCTAGACAGCCATCAAGCCTCAGAATCATTTGTTaGCCATCTTCTCCAGATGATATATTCAGGAGTAACTTCAACCAA +
Preference number: 1 (lower is better)
Translates to: SVSKSRQPSSLRIIC*PSSPDDIFRSNFNQ
Trigger: TTGGTTGAAGTTACTCCTGAATATATCATCTGGAGAAGATGGGCAACAAATGATTCTGAGGCTTGATGGCTGTCTAGACTTACTAACAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR TCA 90 bp TCCCTCTTTCCCAATATCAGACAGGAAGTTACAGGTGCATTCAATTaGATAAACGGCCTCTGCAGTTCGTTTATAAATACTGTAGTTTTC +
Preference number: 1 (lower is better)
Translates to: SLFPNIRQEVTGAFN*INGLCSSFINTVVF
Trigger: GAAAACTACAGTATTTATAAACGAACTGCAGAGGCCGTTTATTCAATTGAATGCACCTGTAACTTCCTGTCTGATATTGGGAAAGAGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581161.5
3UTR-3UTR TCA 90 bp GGCCAGGGCCACGGTAACAAACGGGAGTGTGATGGCACCAGCTTTCCTCAGGAGTTCAGTACTCCCCAATaGAGGTGCCACCGTTGTTTC +
Preference number: 2 (lower is better)
Translates to: GQGHGNKRECDGTSFPQEFSTPQ*RCHRCF
Trigger: GAAACAACGGTGGCACCTTCATTGGGGAGTACTGAA...CTCCTGAGGAAAGCTGGTGCCATCACACTCCCGTTTGTTACCGTGGCCCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
3UTR-3UTR CCA 90 bp GCACATGTGCAGAACATATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGAGAGCTGCCACAACTaGACGGTGTTGGAGTATCAC +
Preference number: 2 (lower is better)
Translates to: AHVQNISIAAVQCLARATESCHN*TVLEYH
Trigger: GTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTC...CGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGATATGTTCTGCACATGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR-3UTR TCA 90 bp ACTGGTCCAGAAGAATGTTCACCACAGTTCCCCAGAGCCCACCGGAAATGTTCTTGTGAGAGGAGAGTGTaGGCTCCATCCCGGAAACGC +
Preference number: 2 (lower is better)
Translates to: TGPEECSPQFPRAHRKCSCERRV*APSRKR
Trigger: GCGTTTCCGGGATGGAGCTCACACTCTCCTCTCACA...AGAACATTTCCGGTGGGCTCTGGGGAACTGTGGTGAACATTCTTCTGGACCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
3UTR-3UTR TCA 90 bp AATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGTAACAAACGGGAGTGTGATACAGGTGCATTCAATTaGATAAACGGCCTCTGCAGT +
Preference number: 2 (lower is better)
Translates to: NRRCPVLGQGHGNKRECDTGAFN*INGLCS
Trigger: ACTGCAGAGGCCGTTTATTCAATTGAATGCACCTGT...ATCACACTCCCGTTTGTTACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581161.5
3UTR-3UTR TCA 90 bp GCAGGCCATAGAAATGAGGCGCATCCGTCACTTTCAGACACTGGAGCAGTTTCACTGTGGGTTGCAGCCTaGACAATGGAATGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: AGHRNEAHPSLSDTGAVSLWVAA*TMEWRQ
Trigger: CTGCCTCCATTCCATTGTTCAGGCTGCAACCCACAG...TGAAACTGCTCCAGTGTCTGAAAGTGACGGATGCGCCTCATTTCTATGGCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
3UTR-3UTR TCA 90 bp GGGACGGCAGGCCATAGAAATGAGGCGCATCCGTCACTTTCAGACACTGGAGCATCTGAAGTTGTTGCCTaGCAGCAGTCCGGATATCAT +
Preference number: 2 (lower is better)
Translates to: GTAGHRNEAHPSLSDTGASEVVA*QQSGYH
Trigger: ATGATATCCGGACTGCTGTCAGGCAACAACTTCAGA...TGCTCCAGTGTCTGAAAGTGACGGATGCGCCTCATTTCTATGGCCTGCCGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
3UTR-3UTR CCA 90 bp ATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGTAACAAACGGGAGTGTCAGTTCTCTCTCTCATaGGAAAGAAGGGGATCAACA +
Preference number: 2 (lower is better)
Translates to: INRRCPVLGQGHGNKRECQFSLS*ERRGST
Trigger: TGTTGATCCCCTTCTTTCCCATGAGAGAGAGAACTG...ACACTCCCGTTTGTTACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR-3UTR CCA 90 bp CAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGACAAGCCTGCACATGTGCAACAACTGGACGGTGTTaGAGTATCACCAGTTCTCTC +
Preference number: 2 (lower is better)
Translates to: QAGSIQGRTRGRQACTCATTGRC*SITSSL
Trigger: GAGAGAACTGGTGATACTCCAACACCGTCCAGTTGT...TGCACATGTGCAGGCTTGTCTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR-3UTR CCA 90 bp CACATGTGCAGAACATATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGAGCCCTTTTCCAGTGTaGATGCTCTGGATAACAGAA +
Preference number: 2 (lower is better)
Translates to: HMCRTYQSPLSSAWPGPRSPFPV*MLWITE
Trigger: TTCTGTTATCCAGAGCATCCACACTGGAAAAGGGCT...CCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGATATGTTCTGCACATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639487.1
3UTR-3UTR CCA 90 bp GTAAGGTCCGCTCAAGGGACGGCAGGCCATAGAAATGAGGCGCATCCGTCACTTATAACAGAATGGCCTTaGCAGCAGTGTTCACCTGCT +
Preference number: 2 (lower is better)
Translates to: VRSAQGTAGHRNEAHPSLITEWP*QQCSPA
Trigger: AGCAGGTGAACACTGCTGCCAAGGCCATTCTGTTAT...AAGTGACGGATGCGCCTCATTTCTATGGCCTGCCGTCCCTTGAGCGGACCTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638251.1
3UTR-3UTR TCA 90 bp GGCCAGGGCCACGGTAACAAACGGGAGTGTGATGGCACCAGCTTTCCTCAGGAGATATGTTCTTCACTATaGCTACCCAAAGGCAAGAAC +
Preference number: 2 (lower is better)
Translates to: GQGHGNKRECDGTSFPQEICSSL*LPKGKN
Trigger: GTTCTTGCCTTTGGGTAGTCATAGTGAAGAACATAT...CTCCTGAGGAAAGCTGGTGCCATCACACTCCCGTTTGTTACCGTGGCCCTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
3UTR-3UTR GCA 90 bp ATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGTAACAAACGGGAGTGTCAGAAAGTTGTCAGCTaGTATTACTTCTGGAGAGCT +
Preference number: 2 (lower is better)
Translates to: INRRCPVLGQGHGNKRECQKVVS*YYFWRA
Trigger: AGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTG...ACACTCCCGTTTGTTACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR-3UTR GCA 90 bp AAGCTGTTTTTGCCTTCTGATAATTGTAAATCAGAGCCCAAAGGGCAGCTGCTCATCGCCGCTGTCCAGTaGTTGGCCAGGGCCACGGTA +
Preference number: 2 (lower is better)
Translates to: KLFLPSDNCKSEPKGQLLIAAVQ*LARATV
Trigger: TACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGAT...GAGCAGCTGCCCTTTGGGCTCTGATTTACAATTATCAGAAGGCAAAAACAGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR-3UTR CCA 90 bp AGAGAACAGAAAGGAATTGCAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGGAGAGCTGCCACAACTaGACGGTGTTGGAGTATCAC +
Preference number: 2 (lower is better)
Translates to: REQKGIASWQYTGQDTWQESCHN*TVLEYH
Trigger: GTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTC...CTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAATTCCTTTCTGTTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR-3UTR CCA 90 bp AGGTCCGCTCAAGGGACGGCAGGCCATAGAAATGAGGCGCATCCGTCACTTTCATTTCACTCGTGGCAATaGGTGAGACAACATATGGAG +
Preference number: 2 (lower is better)
Translates to: RSAQGTAGHRNEAHPSLSFHSWQ*VRQHME
Trigger: CTCCATATGTTGTCTCACCCATTGCCACGAGTGAAA...TGAAAGTGACGGATGCGCCTCATTTCTATGGCCTGCCGTCCCTTGAGCGGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581161.5
3UTR-3UTR TCA 90 bp GTAAGGTCCGCTCAAGGGACGGCAGGCCATAGAAATGAGGCGCATCCGTCACTTAGATTATCACTCCCATaGTACCATGACAGGTTCCAA +
Preference number: 2 (lower is better)
Translates to: VRSAQGTAGHRNEAHPSLRLSLP*YHDRFQ
Trigger: TTGGAACCTGTCATGGTATCATGGGAGTGATAATCT...AAGTGACGGATGCGCCTCATTTCTATGGCCTGCCGTCCCTTGAGCGGACCTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
3UTR-3UTR GCA 90 bp AGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGTCTTCAGGTAACAGCTaGTACACACAGCTGGCTTCA +
Preference number: 2 (lower is better)
Translates to: RAATTGRCWSITSSLSHGSSGNS*YTQLAS
Trigger: TGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGA...CCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
3UTR-3UTR GCA 90 bp CTGTTTAGTGCGGTGTGCCAAGCCAAGGACTTCAAGGTAACCCCACATGGACCATCTTCAGGTAACAGCTaGTACACACAGCTGGCTTCA +
Preference number: 2 (lower is better)
Translates to: LFSAVCQAKDFKVTPHGPSSGNS*YTQLAS
Trigger: TGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGA...TGGTCCATGTGGGGTTACCTTGAAGTCCTTGGCTTGGCACACCGCACTAAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
3UTR-3UTR CCA 90 bp TGGGAAGCCAACTTTAGGATACACAGCATCAGAGAGTTGCTCACGGCTCCTCTAGAGAGCTGCCACAACTaGACGGTGTTGGAGTATCAC +
Preference number: 2 (lower is better)
Translates to: WEANFRIHSIRELLTAPLESCHN*TVLEYH
Trigger: GTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTC...TAGAGGAGCCGTGAGCAACTCTCTGATGCTGTGTATCCTAAAGTTGGCTTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR-3UTR CCA 90 bp GTTTGGGCAGGGGAGCAGAAAGAGATGAATCATGAGGTGGCCGTGGTGATGTACATAACAGAATGGCCTTaGCAGCAGTGTTCACCTCAC +
Preference number: 2 (lower is better)
Translates to: VWAGEQKEMNHEVAVVMYITEWP*QQCSPH
Trigger: GTGAGGTGAACACTGCTGCCAAGGCCATTCTGTTAT...GTACATCACCACGGCCACCTCATGATTCATCTCTTTCTGCTCCCCTGCCCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581161.5
3UTR-3UTR CCA 90 bp CTGTTTAGTGCGGTGTGCCAAGCCAAGGACTTCAAGGTAACCCCACATGGACCAGCAGGTATAACAGAATaGCCTTGGCAGCAGTGTTCA +
Preference number: 2 (lower is better)
Translates to: LFSAVCQAKDFKVTPHGPAGITE*PWQQCS
Trigger: TGAACACTGCTGCCAAGGCCATTCTGTTATACCTGC...TGGTCCATGTGGGGTTACCTTGAAGTCCTTGGCTTGGCACACCGCACTAAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
3UTR CAA 90 bp TGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGTGTaGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGGGGATCA +
Preference number: 2 (lower is better)
Translates to: CQLLLLLESCHNWTV*EYHQFSLSWERRGS
Trigger: TGATCCCCTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
3UTR CAA 90 bp CAGGAGAAAGGAAACCTGCATAGGTTGGAATCTATGTCAGAGACCTaGGACAAGTCACTCATCTCTCTGGGCCTCAGGCATTTCCTGAGC +
Preference number: 2 (lower is better)
Translates to: QEKGNLHRLESMSET*DKSLISLGLRHFLS
Trigger: GCTCAGGAAATGCCTGAGGCCCAGAGAGATGAGTGACTTGTCCAAGGTCTCTGACATAGATTCCAACCTATGCAGGTTTCCTTTCTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679113.1
3UTR-3UTR TCA 90 bp GTTTGGGCAGGGGAGCAGAAAGAGATGAATCATGAGGTGGCCGTGGTGATGTACCTAAACATTCCTTCGTaGTTTCCAGACAGCAGTGGT +
Preference number: 2 (lower is better)
Translates to: VWAGEQKEMNHEVAVVMYLNIPS*FPDSSG
Trigger: ACCACTGCTGTCTGGAAATCACGAAGGAATGTTTAG...GTACATCACCACGGCCACCTCATGATTCATCTCTTTCTGCTCCCCTGCCCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581161.5
3UTR-3UTR TCA 90 bp CTTCTACTGACAGCCAGCAGTGACATCAATGCATTTGCAGCTACTCTTTTCAGGCTGTGGGTTGCAGCCTaGACAATGGAATGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: LLLTASSDINAFAATLFRLWVAA*TMEWRQ
Trigger: CTGCCTCCATTCCATTGTTCAGGCTGCAACCCACAG...CCTGAAAAGAGTAGCTGCAAATGCATTGATGTCACTGCTGGCTGTCAGTAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
3UTR-3UTR TCA 90 bp AGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCGACCTCAAGGAGACCTaGCAAGTACTTCACACAGAT +
Preference number: 2 (lower is better)
Translates to: SCYTQLASTLAPLLMTVSDLKET*QVLHTD
Trigger: ATCTGTGTGAAGTACTTGTCAGGTCTCCTTGAGGTC...GCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
3UTR-3UTR TCA 90 bp CTTCTACTGACAGCCAGCAGTGACATCAATGCATTTGCAGCTACTCTTTTCAGGATGAGGTGGCCGTGGTaGTGTACTTTCCTGGTGACC +
Preference number: 2 (lower is better)
Translates to: LLLTASSDINAFAATLFRMRWPW*CTFLVT
Trigger: GGTCACCAGGAAAGTACATCACCACGGCCACCTCAT...CCTGAAAAGAGTAGCTGCAAATGCATTGATGTCACTGCTGGCTGTCAGTAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
3UTR-3UTR TCA 90 bp CTTCTACTGACAGCCAGCAGTGACATCAATGCATTTGCAGCTACTCTTTTCAGGAAGGCAGCAGGGCTCTaGGTTCCTGGACACATGTCT +
Preference number: 2 (lower is better)
Translates to: LLLTASSDINAFAATLFRKAAGL*VPGHMS
Trigger: AGACATGTGTCCAGGAACTCAGAGCCCTGCTGCCTT...CCTGAAAAGAGTAGCTGCAAATGCATTGATGTCACTGCTGGCTGTCAGTAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
3UTR-3UTR TCA 90 bp CACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGGCCTCTGAGTATTAGATaGGTTGGTCCTGGAAGCCGA +
Preference number: 2 (lower is better)
Translates to: HNWTVLEYHQFSLSWERRPLSIR*VGPGSR
Trigger: TCGGCTTCCAGGACCAACTCATCTAATACTCAGAGG...CCTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679113.1
3UTR-3UTR GCA 90 bp TGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCTTACTTCTGGAGAGCTaGCACAACTGGACGGTGTTG +
Preference number: 2 (lower is better)
Translates to: CYTQLASTLAPLLMTVSFLLLES*HNWTVL
Trigger: CAACACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAA...GAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
3UTR-3UTR GCA 90 bp TCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGTTGAAGAGATTCTCGTaGCTCAGCCACTGGAGTAGC +
Preference number: 2 (lower is better)
Translates to: SSGNSCYTQLASTLAPLLLKRFS*LSHWSS
Trigger: GCTACTCCAGTGGCTGAGGCACGAGAATCTCTTCAA...CAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578780.2
ENST00000639487.1
ENST00000640769.2
3UTR-3UTR CCA 90 bp ACAGAAAGGAATTGCAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGACAAGACAACTGGACGGTGTTaGAGTATCACCAGTTCTCTC +
Preference number: 2 (lower is better)
Translates to: TERNCKLAVYRAGHVADKTTGRC*SITSSL
Trigger: GAGAGAACTGGTGATACTCCAACACCGTCCAGTTGT...CTTGTCTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAATTCCTTTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR CAA 90 bp CTTGAGCCACAAACTGGTCATGGGAGGCTTCAGGTAGAAGTGTTGTaGACTGCACAAGTGGCTGAAATTCAGTACTCCCCAATGAAGGTG +
Preference number: 2 (lower is better)
Translates to: LEPQTGHGRLQVEVL*TAQVAEIQYSPMKV
Trigger: CACCTTCATTGGGGAGTACTGAATTTCAGCCACTTGTGCAGTCAACAACACTTCTACCTGAAGCCTCCCATGACCAGTTTGTGGCTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
3UTR CAA 90 bp GACCTTGAGCCACAAACTGGTCATGGGAGGCTTCAGGTAGAAGTGTaGTTGACTGCACAAGTGGCTGAAATTCAGTACTCCCCAATGAAG +
Preference number: 2 (lower is better)
Translates to: DLEPQTGHGRLQVEV*LTAQVAEIQYSPMK
Trigger: CTTCATTGGGGAGTACTGAATTTCAGCCACTTGTGCAGTCAACAACACTTCTACCTGAAGCCTCCCATGACCAGTTTGTGGCTCAAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
3UTR-3UTR TCA 90 bp TGCAGCCCACTAGCCATGTGTGTTATCTTCAGAGTGAGGATGTCCTCTGTAGATACTCGTGGCAATGGGTaGGACAACATATGGAGAAGC +
Preference number: 2 (lower is better)
Translates to: CSPLAMCVIFRVRMSSVDTRGNG*DNIWRS
Trigger: GCTTCTCCATATGTTGTCTCACCCATTGCCACGAGT...ATCTACAGAGGACATCCTCACTCTGAAGATAACACACATGGCTAGTGGGCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581161.5
3UTR-3UTR TCA 90 bp CAGTCCTGCAGCCCACTAGCCATGTGTGTTATCTTCAGAGTGAGGATGTCCTCTCCTGTAGTATTGGGATaGCAGGACAGAGAGATTCAA +
Preference number: 2 (lower is better)
Translates to: QSCSPLAMCVIFRVRMSSPVVLG*QDREIQ
Trigger: TTGAATCTCTCTGTCCTGTCATCCCAATACTACAGG...AGAGGACATCCTCACTCTGAAGATAACACACATGGCTAGTGGGCTGCAGGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
3UTR-3UTR TCA 90 bp CAGTCCTGCAGCCCACTAGCCATGTGTGTTATCTTCAGAGTGAGGATGTCCTCTAGAGCGAAACACGCATaGCTGGATCACCACATAAAA +
Preference number: 2 (lower is better)
Translates to: QSCSPLAMCVIFRVRMSSRAKHA*LDHHIK
Trigger: TTTTATGTGGTGATCCAGTCATGCGTGTTTCGCTCT...AGAGGACATCCTCACTCTGAAGATAACACACATGGCTAGTGGGCTGCAGGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
3UTR-3UTR TCA 90 bp AAATGTTCTGACAACTGTTTGCTAAGGCCACACAGCCCGTTTCAAGGGTGGTCACGGAAACAGGCAAACTaGAGACCGATGGCAAAGAAG +
Preference number: 2 (lower is better)
Translates to: KCSDNCLLRPHSPFQGWSRKQAN*RPMAKK
Trigger: CTTCTTTGCCATCGGTCTTCAGTTTGCCTGTTTCCG...TGACCACCCTTGAAACGGGCTGTGTGGCCTTAGCAAACAGTTGTCAGAACATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
3UTR-3UTR TCA 90 bp AAGGCCAGAGAGAGTGCAAGACAGGGACAAGGTGAGCTTCAAGAGCTGCTTCTTGCAATCAGTTCTTTCTaGAGTTGTTGCCTGACAGCA +
Preference number: 2 (lower is better)
Translates to: KARESARQGQGELQELLLAISSF*SCCLTA
Trigger: TGCTGTCAGGCAACAACTTCAGAAAGAACTGATTGC...AAGAAGCAGCTCTTGAAGCTCACCTTGTCCCTGTCTTGCACTCTCTCTGGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
3UTR-3UTR TCA 90 bp GCTGAGCTAAATTTGAACCCAGGCTTATACAGCCCCAACTCTATTTCTTTCTTCCCCTGCCTCCCAGGTTaGAGAGATTCTCGTGCCTCA +
Preference number: 2 (lower is better)
Translates to: AELNLNPGLYSPNSISFFPCLPG*RDSRAS
Trigger: TGAGGCACGAGAATCTCTTCAACCTGGGAGGCAGGG...GAAGAAAGAAATAGAGTTGGGGCTGTATAAGCCTGGGTTCAAATTTAGCTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578780.2
ENST00000639487.1
ENST00000640769.2
3UTR-3UTR TCA 90 bp AGACAGGCAGCAAGCACAGTAATGACTTTTTCATTAGCCAGGATCTTGGGTTTACCCTGCCTCCCAGGTTaGAGAGATTCTCGTGCCTCA +
Preference number: 2 (lower is better)
Translates to: RQAASTVMTFSLARILGLPCLPG*RDSRAS
Trigger: TGAGGCACGAGAATCTCTTCAACCTGGGAGGCAGGG...TAAACCCAAGATCCTGGCTAATGAAAAAGTCATTACTGTGCTTGCTGCCTGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639487.1
3UTR-3UTR GCA 90 bp CCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGTCTTCAGGTAACAGCTaGTACACACAGCTGGCTTCA +
Preference number: 2 (lower is better)
Translates to: PQLDGVGVSPVLSLMGKKSSGNS*YTQLAS
Trigger: TGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGA...CTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
3UTR-3UTR GCA 90 bp CATGTGCAGAACATATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGTATCCCAGAACTTTCTATaGCTTTTCAACAGAAAGGAA +
Preference number: 2 (lower is better)
Translates to: HVQNISIAAVQCLARATVSQNFL*LFNRKE
Trigger: TTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGA...TACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGATATGTTCTGCACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR-3UTR CCA 90 bp CCGTGGTGTTCTCCAGTGGCATCTGGGAAGCCAACTTTAGGATACACAGCATCACAGTTCTCTCTCTCATaGGAAAGAAGGGGATCAACA +
Preference number: 2 (lower is better)
Translates to: PWCSPVASGKPTLGYTASQFSLS*ERRGST
Trigger: TGTTGATCCCCTTCTTTCCCATGAGAGAGAGAACTG...TGATGCTGTGTATCCTAAAGTTGGCTTCCCAGATGCCACTGGAGAACACCACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR-3UTR CCA 90 bp TGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCACAACTGGACGGTGTTaGAGTATCACCAGTTCTCTC +
Preference number: 2 (lower is better)
Translates to: CYTQLASTLAPLLMTVSFTTGRC*SITSSL
Trigger: GAGAGAACTGGTGATACTCCAACACCGTCCAGTTGT...GAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
3UTR-3UTR CCA 90 bp CCATCAAAATCCAAGGCCAGAGAGAGTGCAAGACAGGGACAAGGTGAGCTTCAAAGCTGCTATTACTTCTaGAGAGCTGCCACAACTGGA +
Preference number: 2 (lower is better)
Translates to: PSKSKARESARQGQGELQSCYYF*RAATTG
Trigger: TCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCT...TTGAAGCTCACCTTGTCCCTGTCTTGCACTCTCTCTGGCCTTGGATTTTGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR-3UTR CCA 90 bp AAGCATAAAAACCATCTGCTGAACCGTGGTGTTCTCCAGTGGCATCTGGGAAGCAGCTGCTATTACTTCTaGAGAGCTGCCACAACTGGA +
Preference number: 2 (lower is better)
Translates to: KHKNHLLNRGVLQWHLGSSCYYF*RAATTG
Trigger: TCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCT...GCTTCCCAGATGCCACTGGAGAACACCACGGTTCAGCAGATGGTTTTTATGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR CAA 90 bp TGTCGAAAAGCCTTTGCAGTGTCTCTGGGAGCAATCGTCAAGAGGTaGTCCAAGAGGCTGCACATTGCTGAAAGAAGAGATGGAGTAACA +
Preference number: 2 (lower is better)
Translates to: CRKAFAVSLGAIVKR*SKRLHIAERRDGVT
Trigger: TGTTACTCCATCTCTTCTTTCAGCAATGTGCAGCCTCTTGGACAACCTCTTGACGATTGCTCCCAGAGACACTGCAAAGGCTTTTCGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
3UTR CAA 90 bp GAGGGTAGCATCTGCAATGCTACAGAGAAGTTCTATGAGATGAGCTaGTCGAAAAGCCTTTGCAGTGTCTCTGGGAGCAATCGTCAAGAG +
Preference number: 2 (lower is better)
Translates to: EGSICNATEKFYEMS*SKSLCSVSGSNRQE
Trigger: CTCTTGACGATTGCTCCCAGAGACACTGCAAAGGCTTTTCGACAAGCTCATCTCATAGAACTTCTCTGTAGCATTGCAGATGCTACCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
3UTR-3UTR TCA 90 bp AGTATACAGGGCAGGACACGTGGCAGACAAGCCTGCACATGTGCAGAACATATCTCACTTTCGGGCTCTTaGATGCCAAATACAGAGATT +
Preference number: 2 (lower is better)
Translates to: SIQGRTRGRQACTCAEHISLSGS*MPNTEI
Trigger: AATCTCTGTATTTGGCATTCAAGAGCCCGAAAGTGA...GATATGTTCTGCACATGTGCAGGCTTGTCTGCCACGTGTCCTGCCCTGTATACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581161.5
3UTR-3UTR TCA 90 bp TGTGCTCTTCTACTGACAGCCAGCAGTGACATCAATGCATTTGCAGCTACTCTTCGGAAACAGGCAAACTaGAGACCGATGGCAAAGAAG +
Preference number: 2 (lower is better)
Translates to: CALLLTASSDINAFAATLRKQAN*RPMAKK
Trigger: CTTCTTTGCCATCGGTCTTCAGTTTGCCTGTTTCCG...AAGAGTAGCTGCAAATGCATTGATGTCACTGCTGGCTGTCAGTAGAAGAGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
3UTR-3UTR TCA 90 bp AAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACCAGAGTCCTCATCATaGACACAGGGACCATACAAA +
Preference number: 2 (lower is better)
Translates to: KAQKVVSCYYFWRAATTGPESSS*TQGPYK
Trigger: TTTGTATGGTCCCTGTGTTCATGATGAGGACTCTGG...TCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679113.1
3UTR-3UTR GCA 90 bp TGTGCTCTTCTACTGACAGCCAGCAGTGACATCAATGCATTTGCAGCTACTCTTTTACTTCTGGAGAGCTaGCACAACTGGACGGTGTTG +
Preference number: 2 (lower is better)
Translates to: CALLLTASSDINAFAATLLLLES*HNWTVL
Trigger: CAACACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAA...AAGAGTAGCTGCAAATGCATTGATGTCACTGCTGGCTGTCAGTAGAAGAGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR-3UTR GCA 90 bp CAAGCTCATCCTGAATCACAAGGTCAGGCTCCACCAATAAACATGACTGCAGAATTACTTCTGGAGAGCTaGCACAACTGGACGGTGTTG +
Preference number: 2 (lower is better)
Translates to: QAHPESQGQAPPINMTAELLLES*HNWTVL
Trigger: CAACACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAA...TTCTGCAGTCATGTTTATTGGTGGAGCCTGACCTTGTGATTCAGGATGAGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000579986.6
ENST00000583043.5
ENST00000679113.1
3UTR-3UTR GCA 90 bp TTGACTGCACAAGTGGCTGAAATTCAGTACTCCCCAATGAAGGTGCCACCGTTGCTTGTTCCAGGTCAATaGTGTCATCATCAATCGTCC +
Preference number: 2 (lower is better)
Translates to: LTAQVAEIQYSPMKVPPLLVPGQ*CHHQSS
Trigger: GGACGATTGATGATGACAGCATTGACCTGGAACAAG...CAACGGTGGCACCTTCATTGGGGAGTACTGAATTTCAGCCACTTGTGCAGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
3UTR-3UTR GCA 90 bp ACTGGTCCAGAAGAATGTTCACCACAGTTCCCCAGAGCCCACCGGAAATGTTCTTGCTTAGAAGGAGAATaGAGTTACCCAGAGGATCTT +
Preference number: 2 (lower is better)
Translates to: TGPEECSPQFPRAHRKCSCLEGE*SYPEDL
Trigger: AAGATCCTCTGGGTAACTGCATTCTCCTTCTAAGCA...AGAACATTTCCGGTGGGCTCTGGGGAACTGTGGTGAACATTCTTCTGGACCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
3UTR-3UTR GCA 90 bp CCATCAAAATCCAAGGCCAGAGAGAGTGCAAGACAGGGACAAGGTGAGCTTCAAAAAAGAGAAGACTGTTaGGAGAGCGAAACACGCATG +
Preference number: 2 (lower is better)
Translates to: PSKSKARESARQGQGELQKREDC*ESETRM
Trigger: CATGCGTGTTTCGCTCTCGCAACAGTCTTCTCTTTT...TTGAAGCTCACCTTGTCCCTGTCTTGCACTCTCTCTGGCCTTGGATTTTGATGG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
3UTR-3UTR CCA 90 bp AGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTAGCTGCTATTACTTCTaGAGAGCTGCCACAACTGGA +
Preference number: 2 (lower is better)
Translates to: RRGSTLCREVARLQVTAASCYYF*RAATTG
Trigger: TCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCT...AGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
3UTR-3UTR CCA 90 bp CAAGCTCATCCTGAATCACAAGGTCAGGCTCCACCAATAAACATGACTGCAGAAAAGCTACGCAAGGCTTaGTCTGCCAGCTCCACTAAT +
Preference number: 2 (lower is better)
Translates to: QAHPESQGQAPPINMTAEKLRKA*SASSTN
Trigger: ATTAGTGGAGCTGGCAGACCAAGCCTTGCGTAGCTT...TTCTGCAGTCATGTTTATTGGTGGAGCCTGACCTTGTGATTCAGGATGAGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581161.5
3UTR-3UTR CCA 90 bp CAAGGTGTAGCATCCCATGGCACTCAGGAAGAATTAAGGAGCTGCACGAGGTTTCTGACTTGTCCTAGATaGAGCCCTCCAAAACTTGAA +
Preference number: 2 (lower is better)
Translates to: QGVASHGTQEELRSCTRFLTCPR*SPPKLE
Trigger: TTCAAGTTTTGGAGGGCTCCATCTAGGACAAGTCAG...AAACCTCGTGCAGCTCCTTAATTCTTCCTGAGTGCCATGGGATGCTACACCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
3UTR-3UTR TCA 90 bp GTTTCTTCTCGTGCCTGTGACTCTGTCAGAACCAAGAGGTCTAACAGTGGGTTTCCTGTAGTATTGGGATaGCAGGACAGAGAGATTCAA +
Preference number: 2 (lower is better)
Translates to: VSSRACDSVRTKRSNSGFPVVLG*QDREIQ
Trigger: TTGAATCTCTCTGTCCTGTCATCCCAATACTACAGG...AAACCCACTGTTAGACCTCTTGGTTCTGACAGAGTCACAGGCACGAGAAGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
3UTR-3UTR TCA 90 bp CTTTCCAGACAGGCAGCAAGCACAGTAATGACTTTTTCATTAGCCAGGATCTTGCGGAAACAGGCAAACTaGAGACCGATGGCAAAGAAG +
Preference number: 2 (lower is better)
Translates to: LSRQAASTVMTFSLARILRKQAN*RPMAKK
Trigger: CTTCTTTGCCATCGGTCTTCAGTTTGCCTGTTTCCG...CAAGATCCTGGCTAATGAAAAAGTCATTACTGTGCTTGCTGCCTGTCTGGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
3UTR-3UTR TCA 90 bp TCTTCTCGTGCCTGTGACTCTGTCAGAACCAAGAGGTCTAACAGTGGGTTTGCATGGTGTCCAATTACATaGACAGGTAGATGGTACCTT +
Preference number: 2 (lower is better)
Translates to: SSRACDSVRTKRSNSGFAWCPIT*TGRWYL
Trigger: AAGGTACCATCTACCTGTTCATGTAATTGGACACCA...TGCAAACCCACTGTTAGACCTCTTGGTTCTGACAGAGTCACAGGCACGAGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
3UTR-3UTR TCA 90 bp CAAGCCTCAGAATCATTTGTTGCCCATCTTCTCCAGATGATATATTCAGGAGTAGGGAGCAGAAAGAGATaGATCATGAGGTGGCCGTGG +
Preference number: 2 (lower is better)
Translates to: QASESFVAHLLQMIYSGVGSRKR*IMRWPW
Trigger: CCACGGCCACCTCATGATTCATCTCTTTCTGCTCCC...TACTCCTGAATATATCATCTGGAGAAGATGGGCAACAAATGATTCTGAGGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
3UTR-3UTR GCA 90 bp TTGACTGCACAAGTGGCTGAAATTCAGTACTCCCCAATGAAGGTGCCACCGTTGCAGAAAGTTGTCAGCTaGTATTACTTCTGGAGAGCT +
Preference number: 2 (lower is better)
Translates to: LTAQVAEIQYSPMKVPPLQKVVS*YYFWRA
Trigger: AGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTG...CAACGGTGGCACCTTCATTGGGGAGTACTGAATTTCAGCCACTTGTGCAGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000583043.5
ENST00000679113.1
3UTR-3UTR GCA 90 bp TACTCCCCAATGAAGGTGCCACCGTTGTTTCTGAGGTGGAGAGAGAACTTGGATTGCTTAGAAGGAGAATaGAGTTACCCAGAGGATCTT +
Preference number: 2 (lower is better)
Translates to: YSPMKVPPLFLRWRENLDCLEGE*SYPEDL
Trigger: AAGATCCTCTGGGTAACTGCATTCTCCTTCTAAGCA...ATCCAAGTTCTCTCTCCACCTCAGAAACAACGGTGGCACCTTCATTGGGGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
3UTR-3UTR CCA 90 bp AATGCACACTTACTTCTACATAGCCCTTTTCCAGTGTGGATGCTCTGGATAACAGAGAGCTGCCACAACTaGACGGTGTTGGAGTATCAC +
Preference number: 2 (lower is better)
Translates to: NAHLLLHSPFPVWMLWITESCHN*TVLEYH
Trigger: GTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTC...TGTTATCCAGAGCATCCACACTGGAAAAGGGCTATGTAGAAGTAAGTGTGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578780.2
ENST00000639487.1
ENST00000640769.2
3UTR-3UTR CCA 90 bp CGGCGCACCATACTACATTCTGACTGGTCCAGAAGAATGTTCACCACAGTTCCCCAAACTGAAGACCGATaGCAAAGAAGGTTTATTGGA +
Preference number: 2 (lower is better)
Translates to: RRTILHSDWSRRMFTTVPQTEDR*QRRFIG
Trigger: TCCAATAAACCTTCTTTGCCATCGGTCTTCAGTTTG...GGGAACTGTGGTGAACATTCTTCTGGACCAGTCAGAATGTAGTATGGTGCGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
3UTR CAA 90 bp ATCCGTCACTTTCAGACACTGGAGCAGTTTCAGAGCCAGCTGCGTTaGAAAAACGTAAAGAAGTTCCGAGCATTTCCTGTCAGTAACTTC +
Preference number: 2 (lower is better)
Translates to: IRHFQTLEQFQSQLR*KNVKKFRAFPVSNF
Trigger: GAAGTTACTGACAGGAAATGCTCGGAACTTCTTTACGTTTTTCAAACGCAGCTGGCTCTGAAACTGCTCCAGTGTCTGAAAGTGACGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
3UTR-3UTR TCA 90 bp TATCACTCCCATGATACCATGACAGGTTCCAAGCTATTCTCAGCATATCTGACACCTTCCTCAAGAGTGTaGGGCATGGTTGTACCAAAC +
Preference number: 2 (lower is better)
Translates to: YHSHDTMTGSKLFSAYLTPSSRV*GMVVPN
Trigger: GTTTGGTACAACCATGCCTCACACTCTTGAGGAAGG...TGTCAGATATGCTGAGAATAGCTTGGAACCTGTCATGGTATCATGGGAGTGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
3UTR-3UTR TCA 90 bp TGCAGCCCACTAGCCATGTGTGTTATCTTCAGAGTGAGGATGTCCTCTGTAGATTGGTGTCCAATTACATaGACAGGTAGATGGTACCTT +
Preference number: 2 (lower is better)
Translates to: CSPLAMCVIFRVRMSSVDWCPIT*TGRWYL
Trigger: AAGGTACCATCTACCTGTTCATGTAATTGGACACCA...ATCTACAGAGGACATCCTCACTCTGAAGATAACACACATGGCTAGTGGGCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
3UTR-3UTR TCA 90 bp AAATGTTCTGACAACTGTTTGCTAAGGCCACACAGCCCGTTTCAAGGGTGGTCAAGATTATCACTCCCATaGTACCATGACAGGTTCCAA +
Preference number: 2 (lower is better)
Translates to: KCSDNCLLRPHSPFQGWSRLSLP*YHDRFQ
Trigger: TTGGAACCTGTCATGGTATCATGGGAGTGATAATCT...TGACCACCCTTGAAACGGGCTGTGTGGCCTTAGCAAACAGTTGTCAGAACATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
3UTR-3UTR TCA 90 bp TTGACTGCACAAGTGGCTGAAATTCAGTACTCCCCAATGAAGGTGCCACCGTTGATCTCATGGGATAAGTaGAGCAAGCAAAGAATTGTG +
Preference number: 2 (lower is better)
Translates to: LTAQVAEIQYSPMKVPPLISWDK*SKQRIV
Trigger: CACAATTCTTTGCTTGCTTCACTTATCCCATGAGAT...CAACGGTGGCACCTTCATTGGGGAGTACTGAATTTCAGCCACTTGTGCAGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
3UTR-3UTR TCA 90 bp AGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTGAGCCCTCCAAAACTTaGATGAGTCATCTAAACCAT +
Preference number: 2 (lower is better)
Translates to: RRGSTLCREVARLQVTAAEPSKT*MSHLNH
Trigger: ATGGTTTAGATGACTCATTCAAGTTTTGGAGGGCTC...AGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
3UTR-3UTR GCA 90 bp CACTTACTTCTACATAGCCCTTTTCCAGTGTGGATGCTCTGGATAACAGAAAGTTTACTTCTGGAGAGCTaGCACAACTGGACGGTGTTG +
Preference number: 2 (lower is better)
Translates to: HLLLHSPFPVWMLWITESLLLES*HNWTVL
Trigger: CAACACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAA...ACTTTCTGTTATCCAGAGCATCCACACTGGAAAAGGGCTATGTAGAAGTAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578780.2
ENST00000639487.1
ENST00000640769.2
3UTR-3UTR GCA 90 bp CAGCCAGCAGTGACATCAATGCATTTGCAGCTACTCTTTTCAGGATATCTTTGGGGGATTTCACCAAGTTaGCCAAGCTGGTCTCAAACT +
Preference number: 2 (lower is better)
Translates to: QPAVTSMHLQLLFSGYLWGISPS*PSWSQT
Trigger: AGTTTGAGACCAGCTTGGGCAACTTGGTGAAATCCC...CCAAAGATATCCTGAAAAGAGTAGCTGCAAATGCATTGATGTCACTGCTGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639487.1
3UTR-3UTR GCA 90 bp TTAATAACCAGCTCTCTTCTGTCATCCAGTCTGAGTTCAATAGGTTTCTTCCCAGCAGCAGTGTTCACCTaGTCAACAACACAGACCCGA +
Preference number: 2 (lower is better)
Translates to: LITSSLLSSSLSSIGFFPAAVFT*STTQTR
Trigger: TCGGGTCTGTGTTGTTGAGCAGGTGAACACTGCTGC...TGGGAAGAAACCTATTGAACTCAGACTGGATGACAGAAGAGAGCTGGTTATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638251.1
3UTR-3UTR GCA 90 bp CGGCGCACCATACTACATTCTGACTGGTCCAGAAGAATGTTCACCACAGTTCCCAACATTCTACAACCTTaGCATCTTGACTCACACATT +
Preference number: 2 (lower is better)
Translates to: RRTILHSDWSRRMFTTVPNILQP*HLDSHI
Trigger: AATGTGTGAGTCAAGATGGCAAGGTTGTAGAATGTT...GGGAACTGTGGTGAACATTCTTCTGGACCAGTCAGAATGTAGTATGGTGCGCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638251.1
3UTR-3UTR GCA 90 bp GTTTGGGCAGGGGAGCAGAAAGAGATGAATCATGAGGTGGCCGTGGTGATGTACTCCATTTGGAAAATTTaGAGTATAGACACAAAGGAG +
Preference number: 2 (lower is better)
Translates to: VWAGEQKEMNHEVAVVMYSIWKI*SIDTKE
Trigger: CTCCTTTGTGTCTATACTGCAAATTTTCCAAATGGA...GTACATCACCACGGCCACCTCATGATTCATCTCTTTCTGCTCCCCTGCCCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679113.1
3UTR-3UTR CCA 90 bp AAAAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGCAGTTCTCTCTCTCATaGGAAAGAAGGGGATCAACA +
Preference number: 2 (lower is better)
Translates to: KRHRKLSAAITSGELPQLQFSLS*ERRGST
Trigger: TGTTGATCCCCTTCTTTCCCATGAGAGAGAGAACTG...CAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
3UTR-3UTR CCA 90 bp CAGCCAGCAGTGACATCAATGCATTTGCAGCTACTCTTTTCAGGATATCTTTGGAGCTGCTATTACTTCTaGAGAGCTGCCACAACTGGA +
Preference number: 2 (lower is better)
Translates to: QPAVTSMHLQLLFSGYLWSCYYF*RAATTG
Trigger: TCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCT...CCAAAGATATCCTGAAAAGAGTAGCTGCAAATGCATTGATGTCACTGCTGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR-3UTR CCA 90 bp AGGTCAATGCTGTCATCATCAATCGTCCCTGAAGCAGGTATAACAGAATGGCCTTTCAGCTTTCACTCGTaGCAATGGGTGAGACAACAT +
Preference number: 2 (lower is better)
Translates to: RSMLSSSIVPEAGITEWPFSFHS*QWVRQH
Trigger: ATGTTGTCTCACCCATTGCCACGAGTGAAAGCTGAA...AGGCCATTCTGTTATACCTGCTTCAGGGACGATTGATGATGACAGCATTGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581161.5
3UTR-3UTR CCA 90 bp ACTTTCCAGACAGGCAGCAAGCACAGTAATGACTTTTTCATTAGCCAGGATCTTCTCTGGAGAGAACTCTaGCGTCTATTAGAGGACGCT +
Preference number: 2 (lower is better)
Translates to: TFQTGSKHSNDFFISQDLLWREL*RLLEDA
Trigger: AGCGTCCTCTAATAGACGCCAGAGTTCTCTCCAGAG...AAGATCCTGGCTAATGAAAAAGTCATTACTGTGCTTGCTGCCTGTCTGGAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581161.5
3UTR-3UTR CCA 90 bp AAGCTGTTTTTGCCTTCTGATAATTGTAAATCAGAGCCCAAAGGGCAGCTGCTCGGTGGAGAGAGAACTTaGATCTCGATCCTGACTTGT +
Preference number: 2 (lower is better)
Translates to: KLFLPSDNCKSEPKGQLLGGERT*ISILTC
Trigger: ACAAGTCAGGATCGAGATCCAAGTTCTCTCTCCACC...GAGCAGCTGCCCTTTGGGCTCTGATTTACAATTATCAGAAGGCAAAAACAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
3UTR CAA 90 bp TCATCAAGAAGTGAAGCCACTGTTGGACTACAGCATAAATGTGTTTaGCTCTTAGCCTGGAGATGCCCTTTTGCTTCTTCGGTCAAGAGA +
Preference number: 2 (lower is better)
Translates to: SSRSEATVGLQHKCV*LLAWRCPFASSVKR
Trigger: TCTCTTGACCGAAGAAGCAAAAGGGCATCTCCAGGCTAAGAGCAAAACACATTTATGCTGTAGTCCAACAGTGGCTTCACTTCTTGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR-3UTR TCA 90 bp CAAGCTCATCCTGAATCACAAGGTCAGGCTCCACCAATAAACATGACTGCAGAAAATTCCATTGCAAAGTaGAGACACGGGTTTAGTGAC +
Preference number: 2 (lower is better)
Translates to: QAHPESQGQAPPINMTAENSIAK*RHGFSD
Trigger: GTCACTAAACCCGTGTCTTCACTTTGCAATGGAATT...TTCTGCAGTCATGTTTATTGGTGGAGCCTGACCTTGTGATTCAGGATGAGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581161.5
3UTR-3UTR GCA 90 bp TCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGTCCCAGAACTTTCTATaGCTTTTCAACAGAAAGGAA +
Preference number: 2 (lower is better)
Translates to: SSGNSCYTQLASTLAPLLSQNFL*LFNRKE
Trigger: TTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGA...CAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
3UTR-3UTR GCA 90 bp AGCAATCAGTTCTTTCTGAAGTTGTTGCCTGACAGCAGTCCGGATATCATCTGTAAAAGAGAAGACTGTTaGGAGAGCGAAACACGCATG +
Preference number: 2 (lower is better)
Translates to: SNQFFLKLLPDSSPDIICKREDC*ESETRM
Trigger: CATGCGTGTTTCGCTCTCGCAACAGTCTTCTCTTTT...ACAGATGATATCCGGACTGCTGTCAGGCAACAACTTCAGAAAGAACTGATTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
3UTR-3UTR GCA 90 bp AAGGCCAGAGAGAGTGCAAGACAGGGACAAGGTGAGCTTCAAGAGCTGCTTCTTGTTTCAGAGTTCATTTaGTTCAACAGATTATCACTC +
Preference number: 2 (lower is better)
Translates to: KARESARQGQGELQELLLVSEFI*FNRLSL
Trigger: GAGTGATAATCTGTTGAAGCAAATGAACTCTGAAAC...AAGAAGCAGCTCTTGAAGCTCACCTTGTCCCTGTCTTGCACTCTCTCTGGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
3UTR-3UTR CCA 90 bp AGACAGGCAGCAAGCACAGTAATGACTTTTTCATTAGCCAGGATCTTGGGTTTAACAACTGGACGGTGTTaGAGTATCACCAGTTCTCTC +
Preference number: 2 (lower is better)
Translates to: RQAASTVMTFSLARILGLTTGRC*SITSSL
Trigger: GAGAGAACTGGTGATACTCCAACACCGTCCAGTTGT...TAAACCCAAGATCCTGGCTAATGAAAAAGTCATTACTGTGCTTGCTGCCTGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR-3UTR CCA 90 bp TGCTTGTATTTGCTCATCTCTGTTAGTAAGTCTAGACAGCCATCAAGCCTCAGAACAACTGGACGGTGTTaGAGTATCACCAGTTCTCTC +
Preference number: 2 (lower is better)
Translates to: CLYLLISVSKSRQPSSLRTTGRC*SITSSL
Trigger: GAGAGAACTGGTGATACTCCAACACCGTCCAGTTGT...TCTGAGGCTTGATGGCTGTCTAGACTTACTAACAGAGATGAGCAAATACAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR-3UTR CCA 90 bp AATGCACACTTACTTCTACATAGCCCTTTTCCAGTGTGGATGCTCTGGATAACAAGCTGCTATTACTTCTaGAGAGCTGCCACAACTGGA +
Preference number: 2 (lower is better)
Translates to: NAHLLLHSPFPVWMLWITSCYYF*RAATTG
Trigger: TCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCT...TGTTATCCAGAGCATCCACACTGGAAAAGGGCTATGTAGAAGTAAGTGTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578780.2
ENST00000639487.1
ENST00000640769.2
3UTR-3UTR CCA 90 bp TGGAGTAAGGACTCACAGCATGGTGTCCAATTACATGAACAGGTAGATGGTACCCAAGAGTGTGAGGCATaGTTGTACCAAACATTCTAC +
Preference number: 2 (lower is better)
Translates to: WSKDSQHGVQLHEQVDGTQECEA*LYQTFY
Trigger: GTAGAATGTTTGGTACAACCATGCCTCACACTCTTG...GGTACCATCTACCTGTTCATGTAATTGGACACCATGCTGTGAGTCCTTACTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
3UTR-3UTR CCA 90 bp CATCCGTCACTTTCAGACACTGGAGCAGTTTCAGAGCCAGCTGCGTTTGAAAAACAAACTGAAGACCGATaGCAAAGAAGGTTTATTGGA +
Preference number: 2 (lower is better)
Translates to: HPSLSDTGAVSEPAAFEKQTEDR*QRRFIG
Trigger: TCCAATAAACCTTCTTTGCCATCGGTCTTCAGTTTG...TTTTTCAAACGCAGCTGGCTCTGAAACTGCTCCAGTGTCTGAAAGTGACGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
3UTR-3UTR CCA 90 bp CTTCTACTGACAGCCAGCAGTGACATCAATGCATTTGCAGCTACTCTTTTCAGGATGACTGCAGAAGCCTaGACAAAGAGGATAGGTATT +
Preference number: 2 (lower is better)
Translates to: LLLTASSDINAFAATLFRMTAEA*TKRIGI
Trigger: AATACCTATCCTCTTTGTCCAGGCTTCTGCAGTCAT...CCTGAAAAGAGTAGCTGCAAATGCATTGATGTCACTGCTGGCTGTCAGTAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
3UTR-3UTR CCA 90 bp AAGGCCAGAGAGAGTGCAAGACAGGGACAAGGTGAGCTTCAAGAGCTGCTTCTTAGTGTTCTCTCCATTTaGAAAATTTGCAGTATAGAC +
Preference number: 2 (lower is better)
Translates to: KARESARQGQGELQELLLSVLSI*KICSID
Trigger: GTCTATACTGCAAATTTTCCAAATGGAGAGAACACT...AAGAAGCAGCTCTTGAAGCTCACCTTGTCCCTGTCTTGCACTCTCTCTGGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679113.1
3UTR-3UTR TCA 90 bp TTGGTACATATGGTGAGAATTCCAATGATATTGGTGATAAGAGGTTTCACAAGCAGGCAAGAACCAAAGTaGCATCCACTCCAAGCTCCC +
Preference number: 2 (lower is better)
Translates to: LVHMVRIPMILVIRGFTSRQEPK*HPLQAP
Trigger: GGGAGCTTGGAGTGGATGTCACTTTGGTTCTTGCCT...GCTTGTGAAACCTCTTATCACCAATATCATTGGAATTCTCACCATATGTACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
3UTR-3UTR TCA 90 bp TGTGCTCTTCTACTGACAGCCAGCAGTGACATCAATGCATTTGCAGCTACTCTTATATGTTCTTCACTATaGCTACCCAAAGGCAAGAAC +
Preference number: 2 (lower is better)
Translates to: CALLLTASSDINAFAATLICSSL*LPKGKN
Trigger: GTTCTTGCCTTTGGGTAGTCATAGTGAAGAACATAT...AAGAGTAGCTGCAAATGCATTGATGTCACTGCTGGCTGTCAGTAGAAGAGCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
3UTR-3UTR TCA 90 bp GCTGAGCTAAATTTGAACCCAGGCTTATACAGCCCCAACTCTATTTCTTTCTTCCATGATGTTTTGGGCTaGGCTAAATTTGAACCCAGG +
Preference number: 2 (lower is better)
Translates to: AELNLNPGLYSPNSISFFHDVLG*AKFEPR
Trigger: CCTGGGTTCAAATTTAGCTCAGCCCAAAACATCATG...GAAGAAAGAAATAGAGTTGGGGCTGTATAAGCCTGGGTTCAAATTTAGCTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578780.2
ENST00000639487.1
ENST00000640769.2
3UTR-3UTR GCA 90 bp AACACAGGGACCCTGCCAAGTATAATCCTTTATAATTTCTGTAGGCATTGGAATTTACTTCTGGAGAGCTaGCACAACTGGACGGTGTTG +
Preference number: 2 (lower is better)
Translates to: NTGTLPSIILYNFCRHWNLLLES*HNWTVL
Trigger: CAACACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAA...ATTCCAATGCCTACAGAAATTATAAAGGATTATACTTGGCAGGGTCCCTGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583043.5
3UTR-3UTR GCA 90 bp TCTGTTTCTTCTCGTGCCTGTGACTCTGTCAGAACCAAGAGGTCTAACAGTGGGGTTTCAGAGTTCATTTaGTTCAACAGATTATCACTC +
Preference number: 2 (lower is better)
Translates to: SVSSRACDSVRTKRSNSGVSEFI*FNRLSL
Trigger: GAGTGATAATCTGTTGAAGCAAATGAACTCTGAAAC...CCCACTGTTAGACCTCTTGGTTCTGACAGAGTCACAGGCACGAGAAGAAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
3UTR-3UTR GCA 90 bp GTAAGAAGTTACTCTTCTGAATTACTCCTTTACAGTCATGCGACAAGGCCAGGTTTGTCGAAAAGCCTTTaGAGTGTCTCTGGGAGCAAT +
Preference number: 2 (lower is better)
Translates to: VRSYSSELLLYSHATRPGLSKSL*SVSGSN
Trigger: ATTGCTCCCAGAGACACTGCAAAGGCTTTTCGACAA...ACCTGGCCTTGTCGCATGACTGTAAAGGAGTAATTCAGAAGAGTAACTTCTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579986.6
ENST00000581161.5
3UTR-3UTR GCA 90 bp AAGCTGTTTTTGCCTTCTGATAATTGTAAATCAGAGCCCAAAGGGCAGCTGCTCCAGTTTCTTAGGAGCTaGATGGCAATGCTTAACTCT +
Preference number: 2 (lower is better)
Translates to: KLFLPSDNCKSEPKGQLLQFLRS*MAMLNS
Trigger: AGAGTTAAGCATTGCCATGCAGCTCCTAAGAAACTG...GAGCAGCTGCCCTTTGGGCTCTGATTTACAATTATCAGAAGGCAAAAACAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR-3UTR CCA 90 bp TGCTTGTATTTGCTCATCTCTGTTAGTAAGTCTAGACAGCCATCAAGCCTCAGACAGTTCTCTCTCTCATaGGAAAGAAGGGGATCAACA +
Preference number: 2 (lower is better)
Translates to: CLYLLISVSKSRQPSSLRQFSLS*ERRGST
Trigger: TGTTGATCCCCTTCTTTCCCATGAGAGAGAGAACTG...TCTGAGGCTTGATGGCTGTCTAGACTTACTAACAGAGATGAGCAAATACAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR-3UTR CCA 90 bp TGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGGCTTTCAAAGCATGTTTCGAGAGCTGCCACAACTaGACGGTGTTGGAGTATCAC +
Preference number: 2 (lower is better)
Translates to: CFICSMQLSIRLAFKACFESCHN*TVLEYH
Trigger: GTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTC...GAAACATGCTTTGAAAGCCAATCTTATAGACAATTGCATGGAGCAGATGAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR-3UTR CCA 90 bp CAAGCCTCAGAATCATTTGTTGCCCATCTTCTCCAGATGATATATTCAGGAGTAAGCTGCTATTACTTCTaGAGAGCTGCCACAACTGGA +
Preference number: 2 (lower is better)
Translates to: QASESFVAHLLQMIYSGVSCYYF*RAATTG
Trigger: TCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCT...TACTCCTGAATATATCATCTGGAGAAGATGGGCAACAAATGATTCTGAGGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR-3UTR TCA 90 bp AAATCAGTAACTCTGGAGAGAACTCTGGCGTCTATTAGAGGACGCTTTGTATCAATCATCAATCGTCCCTaGAGCAGGTATAACAGAATG +
Preference number: 2 (lower is better)
Translates to: KSVTLERTLASIRGRFVSIINRP*SRYNRM
Trigger: CATTCTGTTATACCTGCTTCAGGGACGATTGATGAT...TGATACAAAGCGTCCTCTAATAGACGCCAGAGTTCTCTCCAGAGTTACTGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
3UTR-3UTR CCA 90 bp TTCTTGCGTTTTAGTTTCAGAGTTCATTTGCTTCAACAGATTATCACTCCCATGCTCTGGAGAGAACTCTaGCGTCTATTAGAGGACGCT +
Preference number: 2 (lower is better)
Translates to: FLRFSFRVHLLQQIITPMLWREL*RLLEDA
Trigger: AGCGTCCTCTAATAGACGCCAGAGTTCTCTCCAGAG...CATGGGAGTGATAATCTGTTGAAGCAAATGAACTCTGAAACTAAAACGCAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
3UTR-3UTR CCA 90 bp GGCAATAAAGGGCTGCTCTTGTGCTTGTATTTGCTCATCTCTGTTAGTAAGTCTGAAACCTGCATAGGTTaGAATCTATGTCAGAGACCT +
Preference number: 2 (lower is better)
Translates to: GNKGLLLCLYLLISVSKSETCIG*NLCQRP
Trigger: AGGTCTCTGACATAGATTCCAACCTATGCAGGTTTC...AGACTTACTAACAGAGATGAGCAAATACAAGCACAAGAGCAGCCCTTTATTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679113.1
3UTR CAA 90 bp CACAACTTGACCAACAAAGAGAACTGCAACCTCTACTCCTTGTCTTaGCTCATTCTTAGTGGTCAGTGTTCTCTCCATTTGGAAAATTTG +
Preference number: 2 (lower is better)
Translates to: HNLTNKENCNLYSLS*LILSGQCSLHLENL
Trigger: CAAATTTTCCAAATGGAGAGAACACTGACCACTAAGAATGAGCAAAGACAAGGAGTAGAGGTTGCAGTTCTCTTTGTTGGTCAAGTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679113.1
3UTR-3UTR GCA 90 bp AGGTTCAGTTGTGCATTTATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGATCTTCAGGTAACAGCTaGTACACACAGCTGGCTTCA +
Preference number: 2 (lower is better)
Translates to: RFSCAFMCFICSMQLSIRSSGNS*YTQLAS
Trigger: TGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGA...TCTTATAGACAATTGCATGGAGCAGATGAAACACATAAATGCACAACTGAACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR-3UTR GCA 90 bp TATGAGGGTAGCATCTGCAATGCTACAGAGAAGTTCTATGAGATGAGCTTGTCGACAGGAAGTTACAGGTaGATTCAATTGAATAAACGG +
Preference number: 2 (lower is better)
Translates to: YEGSICNATEKFYEMSLSTGSYR*IQLNKR
Trigger: CCGTTTATTCAATTGAATGCACCTGTAACTTCCTGT...CGACAAGCTCATCTCATAGAACTTCTCTGTAGCATTGCAGATGCTACCCTCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581161.5
3UTR-3UTR GCA 90 bp CAGCCAGCAGTGACATCAATGCATTTGCAGCTACTCTTTTCAGGATATCTTTGGTTTCGGGCTCTTGAATaGCAAATACAGAGATTTCAT +
Preference number: 2 (lower is better)
Translates to: QPAVTSMHLQLLFSGYLWFRALE*QIQRFH
Trigger: ATGAAATCTCTGTATTTGGCATTCAAGAGCCCGAAA...CCAAAGATATCCTGAAAAGAGTAGCTGCAAATGCATTGATGTCACTGCTGGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581161.5
3UTR-3UTR CCA 90 bp GGCAATAAAGGGCTGCTCTTGTGCTTGTATTTGCTCATCTCTGTTAGTAAGTCTCAAACTGAAGACCGATaGCAAAGAAGGTTTATTGGA +
Preference number: 2 (lower is better)
Translates to: GNKGLLLCLYLLISVSKSQTEDR*QRRFIG
Trigger: TCCAATAAACCTTCTTTGCCATCGGTCTTCAGTTTG...AGACTTACTAACAGAGATGAGCAAATACAAGCACAAGAGCAGCCCTTTATTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
3UTR-3UTR TCA 90 bp CGTTTTAGTTTCAGAGTTCATTTGCTTCAACAGATTATCACTCCCATGATACCAAGTAATGGACTGGCCTaGGCAGATTTCCAGATCTTT +
Preference number: 2 (lower is better)
Translates to: RFSFRVHLLQQIITPMIPSNGLA*ADFQIF
Trigger: AAAGATCTGGAAATCTGCTCAGGCCAGTCCATTACT...TGGTATCATGGGAGTGATAATCTGTTGAAGCAAATGAACTCTGAAACTAAAACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581161.5
3UTR-3UTR GCA 90 bp TTCAGTTGTGCATTTATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGTCTTCAGGTAACAGCTaGTACACACAGCTGGCTTCA +
Preference number: 2 (lower is better)
Translates to: FSCAFMCFICSMQLSIRLSSGNS*YTQLAS
Trigger: TGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGA...CAATCTTATAGACAATTGCATGGAGCAGATGAAACACATAAATGCACAACTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR-3UTR GCA 90 bp GCTGAGCTAAATTTGAACCCAGGCTTATACAGCCCCAACTCTATTTCTTTCTTCTCCCAGAACTTTCTATaGCTTTTCAACAGAAAGGAA +
Preference number: 2 (lower is better)
Translates to: AELNLNPGLYSPNSISFFSQNFL*LFNRKE
Trigger: TTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGA...GAAGAAAGAAATAGAGTTGGGGCTGTATAAGCCTGGGTTCAAATTTAGCTCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578780.2
ENST00000639487.1
ENST00000640769.2
3UTR-3UTR GCA 90 bp CCATCAAGCCTCAGAATCATTTGTTGCCCATCTTCTCCAGATGATATATTCAGGTCCCAGAACTTTCTATaGCTTTTCAACAGAAAGGAA +
Preference number: 2 (lower is better)
Translates to: PSSLRIICCPSSPDDIFRSQNFL*LFNRKE
Trigger: TTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGA...CCTGAATATATCATCTGGAGAAGATGGGCAACAAATGATTCTGAGGCTTGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR-3UTR GCA 90 bp AAAGTTTTCTTTGCTAAGGAGTATGCTTCATCCACTCTTCTTTTTACTGATGGGAAAAGAGAAGACTGTTaGGAGAGCGAAACACGCATG +
Preference number: 2 (lower is better)
Translates to: KVFFAKEYASSTLLFTDGKREDC*ESETRM
Trigger: CATGCGTGTTTCGCTCTCGCAACAGTCTTCTCTTTT...CCCATCAGTAAAAAGAAGAGTGGATGAAGCATACTCCTTAGCAAAGAAAACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
3UTR-3UTR GCA 90 bp AAAGTTTTCTTTGCTAAGGAGTATGCTTCATCCACTCTTCTTTTTACTGATGGGGAGGCAATAAAGGGCTaGTCTTGTGCTTGTATTTGC +
Preference number: 2 (lower is better)
Translates to: KVFFAKEYASSTLLFTDGEAIKG*SCACIC
Trigger: GCAAATACAAGCACAAGAGCAGCCCTTTATTGCCTC...CCCATCAGTAAAAAGAAGAGTGGATGAAGCATACTCCTTAGCAAAGAAAACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR-3UTR CCA 90 bp TTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAACAGTTCTCTCTCTCATaGGAAAGAAGGGGATCAACA +
Preference number: 2 (lower is better)
Translates to: LCSQNFLCLFNRKEKAQKQFSLS*ERRGST
Trigger: TGTTGATCCCCTTCTTTCCCATGAGAGAGAGAACTG...TTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
3UTR CAA 90 bp CTCCCTCTTTCCCAATATCAGACAGGAAGTTACAGGTGCATTCAATaGAATAAACGGCCTCTGCAGTTCGTTTATAAATACTGTAGTTTT +
Preference number: 2 (lower is better)
Translates to: LPLSQYQTGSYRCIQ*NKRPLQFVYKYCSF
Trigger: AAAACTACAGTATTTATAAACGAACTGCAGAGGCCGTTTATTCAATTGAATGCACCTGTAACTTCCTGTCTGATATTGGGAAAGAGGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581161.5
3UTR CAA 90 bp TCTTTGCTCATTCTTAGTGGTCAGTGTTCTCTCCATTTGGAAAATTaGCAGTATAGACACAAAGGAGCTGCAGAGAAATTTGCATCAATG +
Preference number: 2 (lower is better)
Translates to: SLLILSGQCSLHLEN*QYRHKGAAEKFASM
Trigger: CATTGATGCAAATTTCTCTGCAGCTCCTTTGTGTCTATACTGCAAATTTTCCAAATGGAGAGAACACTGACCACTAAGAATGAGCAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679113.1
3UTR CAA 90 bp TACTCCTTGTCTTTGCTCATTCTTAGTGGTCAGTGTTCTCTCCATTaGGAAAATTTGCAGTATAGACACAAAGGAGCTGCAGAGAAATTT +
Preference number: 2 (lower is better)
Translates to: YSLSLLILSGQCSLH*ENLQYRHKGAAEKF
Trigger: AAATTTCTCTGCAGCTCCTTTGTGTCTATACTGCAAATTTTCCAAATGGAGAGAACACTGACCACTAAGAATGAGCAAAGACAAGGAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679113.1
3UTR-3UTR TCA 90 bp ATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGGCTTTCAAAGCATGTATCTCATGGGATAAGTaGAGCAAGCAAAGAATTGTG +
Preference number: 2 (lower is better)
Translates to: MCFICSMQLSIRLAFKACISWDK*SKQRIV
Trigger: CACAATTCTTTGCTTGCTTCACTTATCCCATGAGAT...ACATGCTTTGAAAGCCAATCTTATAGACAATTGCATGGAGCAGATGAAACACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
3UTR-3UTR GCA 90 bp AGTTGTGCATTTATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGGCTTCCCAGAACTTTCTATaGCTTTTCAACAGAAAGGAA +
Preference number: 2 (lower is better)
Translates to: SCAFMCFICSMQLSIRLASQNFL*LFNRKE
Trigger: TTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGA...AGCCAATCTTATAGACAATTGCATGGAGCAGATGAAACACATAAATGCACAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR-3UTR CAA 90 bp CAAGGTGTAGCATCCCATGGCACTCAGGAAGAATTAAGGAGCTGCACGAGGTTTGCCGCTGTCCAGTGCTaGGCCAGGGCCACGGTAACA +
Preference number: 3 (lower is better)
Translates to: QGVASHGTQEELRSCTRFAAVQC*ARATVT
Trigger: TGTTACCGTGGCCCTGGCCAAGCACTGGACAGCGGC...AAACCTCGTGCAGCTCCTTAATTCTTCCTGAGTGCCATGGGATGCTACACCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR GCA 72 bp CATCCTGGTGACAGCAGCCCTAACTTCCCTGTGGGTTaGAGCCTGAACAATGGAATGGAGGCAGTCCTGCAG +
Preference number: 3 (lower is better)
Translates to: HPGDSSPNFPVG*SLNNGMEAVLQ
Trigger: CTGCAGGACTGCCTCCATTCCATTGTTCAGGCTGCAACCCACAGGGAAGTTAGGGCTGCTGTCACCAGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
3UTR GCA 72 bp GCACATGTGCAGAACATATCAATCGCCGCTGTCCAGTaGTTGGCCAGGGCCACGGTAACAAACGGGAGTGTG +
Preference number: 3 (lower is better)
Translates to: AHVQNISIAAVQ*LARATVTNGSV
Trigger: CACACTCCCGTTTGTTACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGATATGTTCTGCACATGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR GCA 72 bp GGCAGTATACAGGGCAGGACACGTGGCAGACAAGCCTaGACATGTGCAGAACATATCAATCGCCGCTGTCCA +
Preference number: 3 (lower is better)
Translates to: GSIQGRTRGRQA*TCAEHINRRCP
Trigger: TGGACAGCGGCGATTGATATGTTCTGCACATGTGCAGGCTTGTCTGCCACGTGTCCTGCCCTGTATACTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR CCA 72 bp AATGCCGCCTCCCGGCGCACCATACTACATTCTGACTaGTCCAGAAGAATGTTCACCACAGTTCCCCAGAGC +
Preference number: 3 (lower is better)
Translates to: NAASRRTILHSD*SRRMFTTVPQS
Trigger: GCTCTGGGGAACTGTGGTGAACATTCTTCTGGACCAGTCAGAATGTAGTATGGTGCGCCGGGAGGCGGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
3UTR-3UTR CAA 90 bp CAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGACAAGCCTGCACATGTGCACACAACTGGACGGTGTaGGAGTATCACCAGTTCTCT +
Preference number: 3 (lower is better)
Translates to: QAGSIQGRTRGRQACTCAHNWTV*EYHQFS
Trigger: AGAGAACTGGTGATACTCCAACACCGTCCAGTTGTG...TGCACATGTGCAGGCTTGTCTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR-3UTR CAA 90 bp GCACATGTGCAGAACATATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGCAAAAGAGAAGACTGTaGCGAGAGCGAAACACGCAT +
Preference number: 3 (lower is better)
Translates to: AHVQNISIAAVQCLARATQKRRL*RERNTH
Trigger: ATGCGTGTTTCGCTCTCGCAACAGTCTTCTCTTTTG...CGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGATATGTTCTGCACATGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
3UTR CCA 72 bp GCTGGAGGTGATGAAGGCAGCAGGGCTCTGAGTTCCTaGACACATGTCTGTATGAGGGTAGCATCTGCAATG +
Preference number: 3 (lower is better)
Translates to: AGGDEGSRALSS*THVCMRVASAM
Trigger: CATTGCAGATGCTACCCTCATACAGACATGTGTCCAGGAACTCAGAGCCCTGCTGCCTTCATCACCTCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
3UTR-3UTR CAA 90 bp CATGTGCAGAACATATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGTAACTTTAGCTCCCCTGTaGATGACTGTCAGCTTCAAG +
Preference number: 3 (lower is better)
Translates to: HVQNISIAAVQCLARATVTLAPL*MTVSFK
Trigger: CTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGT...TACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGATATGTTCTGCACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR TCA 72 bp TTCACCACAGTTCCCCAGAGCCCACCGGAAATGTTCTaGCAACTGTTTGCTAAGGCCACACAGCCCGTTTCA +
Preference number: 3 (lower is better)
Translates to: FTTVPQSPPEMF*QLFAKATQPVS
Trigger: TGAAACGGGCTGTGTGGCCTTAGCAAACAGTTGTCAGAACATTTCCGGTGGGCTCTGGGGAACTGTGGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
3UTR-3UTR CAA 90 bp AATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGTAACAAACGGGAGTGTGATAAAAGGCACAGAAAGTaGTCAGCTGCTATTACTTCT +
Preference number: 3 (lower is better)
Translates to: NRRCPVLGQGHGNKRECDKRHRK*SAAITS
Trigger: AGAAGTAATAGCAGCTGACAACTTTCTGTGCCTTTT...ATCACACTCCCGTTTGTTACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR TCA 72 bp AATAAATGCCGCCTCCCGGCGCACCATACTACATTCTaGCTGGTCCAGAAGAATGTTCACCACAGTTCCCCA +
Preference number: 3 (lower is better)
Translates to: NKCRLPAHHTTF*LVQKNVHHSSP
Trigger: TGGGGAACTGTGGTGAACATTCTTCTGGACCAGTCAGAATGTAGTATGGTGCGCCGGGAGGCGGCATTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
3UTR GCA 72 bp GCAGGAAGCACCTGTAAAAACCTGTTTAGTGCGGTGTaGCAAGCCAAGGACTTCAAGGTAACCCCACATGGA +
Preference number: 3 (lower is better)
Translates to: AGSTCKNLFSAV*QAKDFKVTPHG
Trigger: TCCATGTGGGGTTACCTTGAAGTCCTTGGCTTGGCACACCGCACTAAACAGGTTTTTACAGGTGCTTCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
3UTR CCA 72 bp TACTCCCCAATGAAGGTGCCACCGTTGTTTCTGAGGTaGAGAGAGAACTTGGATCTCGATCCTGACTTGTCC +
Preference number: 3 (lower is better)
Translates to: YSPMKVPPLFLR*RENLDLDPDLS
Trigger: GGACAAGTCAGGATCGAGATCCAAGTTCTCTCTCCACCTCAGAAACAACGGTGGCACCTTCATTGGGGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
ENST00000679113.1
3UTR CCA 72 bp GGAATTGCAAGCTGGCAGTATACAGGGCAGGACACGTaGCAGACAAGCCTGCACATGTGCAGAACATATCAA +
Preference number: 3 (lower is better)
Translates to: GIASWQYTGQDT*QTSLHMCRTYQ
Trigger: TTGATATGTTCTGCACATGTGCAGGCTTGTCTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR CCA 72 bp TCAATCGTCCCTGAAGCAGGTATAACAGAATGGCCTTaGCAGCAGTGTTCACCTGCTCAACAACACAGACCC +
Preference number: 3 (lower is better)
Translates to: SIVPEAGITEWP*QQCSPAQQHRP
Trigger: GGGTCTGTGTTGTTGAGCAGGTGAACACTGCTGCCAAGGCCATTCTGTTATACCTGCTTCAGGGACGATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638251.1
3UTR-3UTR CAA 90 bp GCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAACTTTAGCTCCCCTGTaGATGACTGTCAGCTTCAAG +
Preference number: 3 (lower is better)
Translates to: AATTGRCWSITSSLSHGKTLAPL*MTVSFK
Trigger: CTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGT...TTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
3UTR-3UTR CAA 90 bp GGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGACTTTAGCTCCCCTGTaGATGACTGTCAGCTTCAAG +
Preference number: 3 (lower is better)
Translates to: GTESCQLLLLLESCHNWTTLAPL*MTVSFK
Trigger: CTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGT...CGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
3UTR-3UTR CAA 90 bp CTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGACTTTAGCTCCCCTGTaGATGACTGTCAGCTTCAAG +
Preference number: 3 (lower is better)
Translates to: LPQLDGVGVSPVLSLMGKTLAPL*MTVSFK
Trigger: CTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGT...CTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
3UTR-3UTR CAA 90 bp GAAAGGAATTGCAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGACAAGCCTGAGTGTGAGGCATGGTaGTACCAAACATTCTACAAC +
Preference number: 3 (lower is better)
Translates to: ERNCKLAVYRAGHVADKPECEAW*YQTFYN
Trigger: GTTGTAGAATGTTTGGTACAACCATGCCTCACACTC...AGGCTTGTCTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAATTCCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581161.5
3UTR-3UTR CAA 90 bp AGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTATGAAGGTGCCACCGTaGTTTCTGAGGTGGAGAGAG +
Preference number: 3 (lower is better)
Translates to: RRGSTLCREVARLQVTAAMKVPP*FLRWRE
Trigger: CTCTCTCCACCTCAGAAACAACGGTGGCACCTTCAT...AGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
3UTR TCA 72 bp AAGGCCAGGTTTGAAAGAAGCATAAAAACCATCTGCTaGACCGTGGTGTTCTCCAGTGGCATCTGGGAAGCC +
Preference number: 3 (lower is better)
Translates to: KARFERSIKTIC*TVVFSSGIWEA
Trigger: GGCTTCCCAGATGCCACTGGAGAACACCACGGTTCAGCAGATGGTTTTTATGCTTCTTTCAAACCTGGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR CCA 72 bp TGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTaGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCA +
Preference number: 3 (lower is better)
Translates to: CQLLLLLESCHN*TVLEYHQFSLS
Trigger: TGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
3UTR CCA 72 bp TCAATCGTCCCTGAAGCAGGTATAACAGAATGGCCTTaGCAGCAGTGTTCACCTCACTTTCGGGCTCTTGAA +
Preference number: 3 (lower is better)
Translates to: SIVPEAGITEWP*QQCSPHFRALE
Trigger: TTCAAGAGCCCGAAAGTGAGGTGAACACTGCTGCCAAGGCCATTCTGTTATACCTGCTTCAGGGACGATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581161.5
3UTR CCA 72 bp TCATCATCAATCGTCCCTGAAGCAGGTATAACAGAATaGCCTTGGCAGCAGTGTTCACCTCACTTTCGGGCT +
Preference number: 3 (lower is better)
Translates to: SSSIVPEAGITE*PWQQCSPHFRA
Trigger: AGCCCGAAAGTGAGGTGAACACTGCTGCCAAGGCCATTCTGTTATACCTGCTTCAGGGACGATTGATGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581161.5
3UTR-3UTR CAA 90 bp AGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTCACAACTGGACGGTGTaGGAGTATCACCAGTTCTCT +
Preference number: 3 (lower is better)
Translates to: RRGSTLCREVARLQVTAAHNWTV*EYHQFS
Trigger: AGAGAACTGGTGATACTCCAACACCGTCCAGTTGTG...AGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
3UTR-3UTR CAA 90 bp AAGCATAAAAACCATCTGCTGAACCGTGGTGTTCTCCAGTGGCATCTGGGAAGCGGAAACCTGCATAGGTaGGAATCTATGTCAGAGACC +
Preference number: 3 (lower is better)
Translates to: KHKNHLLNRGVLQWHLGSGNLHR*ESMSET
Trigger: GGTCTCTGACATAGATTCCAACCTATGCAGGTTTCC...GCTTCCCAGATGCCACTGGAGAACACCACGGTTCAGCAGATGGTTTTTATGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679113.1
3UTR TCA 72 bp TTGTTCCAGGTCAATGCTGTCATCATCAATCGTCCCTaGAGCAGGTATAACAGAATGGCCTTGGCAGCAGTG +
Preference number: 3 (lower is better)
Translates to: LFQVNAVIINRP*SRYNRMALAAV
Trigger: CACTGCTGCCAAGGCCATTCTGTTATACCTGCTTCAGGGACGATTGATGATGACAGCATTGACCTGGAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
3UTR TCA 72 bp GCTTCAGGTAGAAGTGTTGTTGACTGCACAAGTGGCTaGAATTCAGTACTCCCCAATGAAGGTGCCACCGTT +
Preference number: 3 (lower is better)
Translates to: ASGRSVVDCTSG*NSVLPNEGATV
Trigger: AACGGTGGCACCTTCATTGGGGAGTACTGAATTTCAGCCACTTGTGCAGTCAACAACACTTCTACCTGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
ENST00000679113.1
3UTR GCA 72 bp ACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTaGCACAACTGGACGGTGTTGGAGTATCACCAGTTC +
Preference number: 3 (lower is better)
Translates to: TESCQLLLLLES*HNWTVLEYHQF
Trigger: GAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
3UTR CCA 72 bp TCATCATCAATCGTCCCTGAAGCAGGTATAACAGAATaGCCTTGGCAGCAGTGTTCACCTGCTCAACAACAC +
Preference number: 3 (lower is better)
Translates to: SSSIVPEAGITE*PWQQCSPAQQH
Trigger: GTGTTGTTGAGCAGGTGAACACTGCTGCCAAGGCCATTCTGTTATACCTGCTTCAGGGACGATTGATGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638251.1
3UTR CCA 72 bp GAAACCTGCATAGGTTGGAATCTATGTCAGAGACCTTaGACAAGTCACTCATCTCTCTGGGCCTCAGGCATT +
Preference number: 3 (lower is better)
Translates to: ETCIGWNLCQRP*TSHSSLWASGI
Trigger: AATGCCTGAGGCCCAGAGAGATGAGTGACTTGTCCAAGGTCTCTGACATAGATTCCAACCTATGCAGGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679113.1
3UTR-3UTR CAA 90 bp TGCAGCCCACTAGCCATGTGTGTTATCTTCAGAGTGAGGATGTCCTCTGTAGATACTTTAGCTCCCCTGTaGATGACTGTCAGCTTCAAG +
Preference number: 3 (lower is better)
Translates to: CSPLAMCVIFRVRMSSVDTLAPL*MTVSFK
Trigger: CTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGT...ATCTACAGAGGACATCCTCACTCTGAAGATAACACACATGGCTAGTGGGCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
3UTR-3UTR CAA 90 bp TCTCTGGGAGCAATCGTCAAGAGGTTGTCCAAGAGGCTGCACATTGCTGAAAGATACAGGTGCATTCAATaGAATAAACGGCCTCTGCAG +
Preference number: 3 (lower is better)
Translates to: SLGAIVKRLSKRLHIAERYRCIQ*NKRPLQ
Trigger: CTGCAGAGGCCGTTTATTCAATTGAATGCACCTGTA...TCTTTCAGCAATGTGCAGCCTCTTGGACAACCTCTTGACGATTGCTCCCAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581161.5
3UTR-3UTR CAA 90 bp CATCCGTCACTTTCAGACACTGGAGCAGTTTCAGAGCCAGCTGCGTTTGAAAAATATAACAGAATGGCCTaGGCAGCAGTGTTCACCTCA +
Preference number: 3 (lower is better)
Translates to: HPSLSDTGAVSEPAAFEKYNRMA*AAVFTS
Trigger: TGAGGTGAACACTGCTGCCAAGGCCATTCTGTTATA...TTTTTCAAACGCAGCTGGCTCTGAAACTGCTCCAGTGTCTGAAAGTGACGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581161.5
3UTR-3UTR CAA 90 bp ACTGGTCCAGAAGAATGTTCACCACAGTTCCCCAGAGCCCACCGGAAATGTTCTCTTCTGTGTCAGAACTaGCTTTGCTTAGAAGGAGAA +
Preference number: 3 (lower is better)
Translates to: TGPEECSPQFPRAHRKCSLLCQN*LCLEGE
Trigger: TTCTCCTTCTAAGCAAAGCAAGTTCTGACACAGAAG...AGAACATTTCCGGTGGGCTCTGGGGAACTGTGGTGAACATTCTTCTGGACCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
3UTR-3UTR CAA 90 bp TGCAGCCCACTAGCCATGTGTGTTATCTTCAGAGTGAGGATGTCCTCTGTAGATCTATTAGAGGACGCTTaGTATCAGCCCCTTCTTCAC +
Preference number: 3 (lower is better)
Translates to: CSPLAMCVIFRVRMSSVDLLEDA*YQPLLH
Trigger: GTGAAGAAGGGGCTGATACAAAGCGTCCTCTAATAG...ATCTACAGAGGACATCCTCACTCTGAAGATAACACACATGGCTAGTGGGCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
3UTR-3UTR CAA 90 bp CGGCGCACCATACTACATTCTGACTGGTCCAGAAGAATGTTCACCACAGTTCCCCCAAGCCAATCCTTGTaGAGTAGGAATATGTTCTTC +
Preference number: 3 (lower is better)
Translates to: RRTILHSDWSRRMFTTVPPSQSL*SRNMFF
Trigger: GAAGAACATATTCCTACTCAACAAGGATTGGCTTGG...GGGAACTGTGGTGAACATTCTTCTGGACCAGTCAGAATGTAGTATGGTGCGCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
3UTR-3UTR CAA 90 bp AGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTTGGGCTGAGCTAAATTaGAACCCAGGCTTATACAGC +
Preference number: 3 (lower is better)
Translates to: RRGSTLCREVARLQVTAAWAELN*NPGLYS
Trigger: GCTGTATAAGCCTGGGTTCAAATTTAGCTCAGCCCA...AGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578780.2
ENST00000639487.1
ENST00000640769.2
3UTR-3UTR CAA 90 bp AGAGAACAGAAAGGAATTGCAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGAAAAGGCACAGAAAGTaGTCAGCTGCTATTACTTCT +
Preference number: 3 (lower is better)
Translates to: REQKGIASWQYTGQDTWQKRHRK*SAAITS
Trigger: AGAAGTAATAGCAGCTGACAACTTTCTGTGCCTTTT...CTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAATTCCTTTCTGTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR-3UTR CAA 90 bp GTTTCTTCTCGTGCCTGTGACTCTGTCAGAACCAAGAGGTCTAACAGTGGGTTTCTCACTTTCGGGCTCTaGAATGCCAAATACAGAGAT +
Preference number: 3 (lower is better)
Translates to: VSSRACDSVRTKRSNSGFLTFGL*NAKYRD
Trigger: ATCTCTGTATTTGGCATTCAAGAGCCCGAAAGTGAG...AAACCCACTGTTAGACCTCTTGGTTCTGACAGAGTCACAGGCACGAGAAGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581161.5
3UTR-3UTR CAA 90 bp GACAGGTTCCAAGCTATTCTCAGCATATCTGACACCGGCTTCAAGGCCAAACAAGAGTGTGAGGCATGGTaGTACCAAACATTCTACAAC +
Preference number: 3 (lower is better)
Translates to: DRFQAILSISDTGFKAKQECEAW*YQTFYN
Trigger: GTTGTAGAATGTTTGGTACAACCATGCCTCACACTC...TTGTTTGGCCTTGAAGCCGGTGTCAGATATGCTGAGAATAGCTTGGAACCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
3UTR-3UTR CAA 90 bp TGGAGTAAGGACTCACAGCATGGTGTCCAATTACATGAACAGGTAGATGGTACCCAAAAGAGAAGACTGTaGCGAGAGCGAAACACGCAT +
Preference number: 3 (lower is better)
Translates to: WSKDSQHGVQLHEQVDGTQKRRL*RERNTH
Trigger: ATGCGTGTTTCGCTCTCGCAACAGTCTTCTCTTTTG...GGTACCATCTACCTGTTCATGTAATTGGACACCATGCTGTGAGTCCTTACTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
3UTR TCA 72 bp AGTGATATAAAAGAGCCTGAAGGGCAGGTTTTCCAATaGGCGATAGGCCAGAGTCCTCATCATGAACACAGG +
Preference number: 3 (lower is better)
Translates to: SDIKEPEGQVFQ*AIGQSPHHEHR
Trigger: CCTGTGTTCATGATGAGGACTCTGGCCTATCGCTCATTGGAAAACCTGCCCTTCAGGCTCTTTTATATCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
ENST00000679113.1
3UTR TCA 72 bp GTTTCTGAGGTGGAGAGAGAACTTGGATCTCGATCCTaGCTTGTCCTAGATGGAGCCCTCCAAAACTTGAAT +
Preference number: 3 (lower is better)
Translates to: VSEVERELGSRS*LVLDGALQNLN
Trigger: ATTCAAGTTTTGGAGGGCTCCATCTAGGACAAGTCAGGATCGAGATCCAAGTTCTCTCTCCACCTCAGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
ENST00000679113.1
3UTR TCA 72 bp ATCAGAGAGTTGCTCACGGCTCCTCTATGTGTAGCTTaGACAGGGTGTTGTCCACAACTTGACCAACAAAGA +
Preference number: 3 (lower is better)
Translates to: IRELLTAPLCVA*TGCCPQLDQQR
Trigger: TCTTTGTTGGTCAAGTTGTGGACAACACCCTGTTCAAGCTACACATAGAGGAGCCGTGAGCAACTCTCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR TCA 72 bp CCCCAGAATCAATGTTCACTCCTTAGAGACTGGGGGTaGTATCACCTTGTTGAGCTTGTCCAGTCTAACCTA +
Preference number: 3 (lower is better)
Translates to: PQNQCSLLRDWG*YHLVELVQSNL
Trigger: TAGGTTAGACTGGACAAGCTCAACAAGGTGATATCACCCCCAGTCTCTAAGGAGTGAACATTGATTCTGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639487.1
3UTR GCA 72 bp CTTCTGTGTCAGAACTTGCTTTGCTTAGAAGGAGAATaGAGTTACCCAGAGGATCTTCTGTGTCGGCATAGC +
Preference number: 3 (lower is better)
Translates to: LLCQNLLCLEGE*SYPEDLLCRHS
Trigger: GCTATGCCGACACAGAAGATCCTCTGGGTAACTGCATTCTCCTTCTAAGCAAAGCAAGTTCTGACACAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
3UTR CCA 72 bp TTCCAGACAGCAGTGGTAAGTTTCAGCTTTCACTCGTaGCAATGGGTGAGACAACATATGGAGAAGCACCTT +
Preference number: 3 (lower is better)
Translates to: FQTAVVSFSFHS*QWVRQHMEKHL
Trigger: AAGGTGCTTCTCCATATGTTGTCTCACCCATTGCCACGAGTGAAAGCTGAAACTTACCACTGCTGTCTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581161.5
3UTR CCA 72 bp GGACGCTTTGTATCAGCCCCTTCTTCACTGGTAAGATaGAATGCTAAAAGCTTTAATGCTAGCGAACGGACC +
Preference number: 3 (lower is better)
Translates to: GRFVSAPSSLVR*NAKSFNASERT
Trigger: GGTCCGTTCGCTAGCATTAAAGCTTTTAGCATTCCATCTTACCAGTGAAGAAGGGGCTGATACAAAGCGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
3UTR-3UTR CAA 90 bp ACTGGTCCAGAAGAATGTTCACCACAGTTCCCCAGAGCCCACCGGAAATGTTCTGTAACTTCCATGAAATaGAGCAGCAAGGTATCAAAA +
Preference number: 3 (lower is better)
Translates to: TGPEECSPQFPRAHRKCSVTSMK*SSKVSK
Trigger: TTTTGATACCTTGCTGCTCAATTTCATGGAAGTTAC...AGAACATTTCCGGTGGGCTCTGGGGAACTGTGGTGAACATTCTTCTGGACCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
3UTR-3UTR CAA 90 bp AGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTCAACCAAGCCAATCCTaGTTGAGTAGGAATATGTTC +
Preference number: 3 (lower is better)
Translates to: RRGSTLCREVARLQVTAAQPSQS*LSRNMF
Trigger: GAACATATTCCTACTCAACAAGGATTGGCTTGGTTG...AGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
3UTR TCA 72 bp TCAAAAGAGAAGACTGTTGCGAGAGCGAAACACGCATaGCTGGATCACCACATAAAACCTTCCTCAAGAGTG +
Preference number: 3 (lower is better)
Translates to: SKEKTVARAKHA*LDHHIKPSSRV
Trigger: CACTCTTGAGGAAGGTTTTATGTGGTGATCCAGTCATGCGTGTTTCGCTCTCGCAACAGTCTTCTCTTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
3UTR TCA 72 bp GTAGCATCTGCAATGCTACAGAGAAGTTCTATGAGATaGGCTTGTCGAAAAGCCTTTGCAGTGTCTCTGGGA +
Preference number: 3 (lower is better)
Translates to: VASAMLQRSSMR*ACRKAFAVSLG
Trigger: TCCCAGAGACACTGCAAAGGCTTTTCGACAAGCTCATCTCATAGAACTTCTCTGTAGCATTGCAGATGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
3UTR-3UTR CAA 90 bp GGCTTTTCAAAGCTGTTTTTGCCTTCTGATAATTGTAAATCAGAGCCCAAAGGGCACAACTGGACGGTGTaGGAGTATCACCAGTTCTCT +
Preference number: 3 (lower is better)
Translates to: GFSKLFLPSDNCKSEPKGHNWTV*EYHQFS
Trigger: AGAGAACTGGTGATACTCCAACACCGTCCAGTTGTG...CCCTTTGGGCTCTGATTTACAATTATCAGAAGGCAAAAACAGCTTTGAAAAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR-3UTR CAA 90 bp GACTTCAAGGTAACCCCACATGGACCAGGGCAACCCTTTAAAGACAATCTGTCAAAAAGGCACAGAAAGTaGTCAGCTGCTATTACTTCT +
Preference number: 3 (lower is better)
Translates to: DFKVTPHGPGQPFKDNLSKRHRK*SAAITS
Trigger: AGAAGTAATAGCAGCTGACAACTTTCTGTGCCTTTT...TGACAGATTGTCTTTAAAGGGTTGCCCTGGTCCATGTGGGGTTACCTTGAAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583043.5
3UTR-3UTR CAA 90 bp CAAGCTCATCCTGAATCACAAGGTCAGGCTCCACCAATAAACATGACTGCAGAACTTCTGTGTCAGAACTaGCTTTGCTTAGAAGGAGAA +
Preference number: 3 (lower is better)
Translates to: QAHPESQGQAPPINMTAELLCQN*LCLEGE
Trigger: TTCTCCTTCTAAGCAAAGCAAGTTCTGACACAGAAG...TTCTGCAGTCATGTTTATTGGTGGAGCCTGACCTTGTGATTCAGGATGAGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581161.5
3UTR-3UTR CAA 90 bp CAAGCCTCAGAATCATTTGTTGCCCATCTTCTCCAGATGATATATTCAGGAGTACAGTTCTTTCTGAAGTaGTTGCCTGACAGCAGTCCG +
Preference number: 3 (lower is better)
Translates to: QASESFVAHLLQMIYSGVQFFLK*LPDSSP
Trigger: CGGACTGCTGTCAGGCAACAACTTCAGAAAGAACTG...TACTCCTGAATATATCATCTGGAGAAGATGGGCAACAAATGATTCTGAGGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
3UTR TCA 72 bp GCCTTGGCAGCAGTGTTCACCTCACTTTCGGGCTCTTaGATGCCAAATACAGAGATTTCATACAGAACTTTT +
Preference number: 3 (lower is better)
Translates to: ALAAVFTSLSGS*MPNTEISYRTF
Trigger: AAAAGTTCTGTATGAAATCTCTGTATTTGGCATTCAAGAGCCCGAAAGTGAGGTGAACACTGCTGCCAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581161.5
3UTR GCA 72 bp CTCCCTCTTTCCCAATATCAGACAGGAAGTTACAGGTaGATTCAATTGAATAAACGGCCTCTGCAGTTCGTT +
Preference number: 3 (lower is better)
Translates to: LPLSQYQTGSYR*IQLNKRPLQFV
Trigger: AACGAACTGCAGAGGCCGTTTATTCAATTGAATGCACCTGTAACTTCCTGTCTGATATTGGGAAAGAGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581161.5
3UTR GCA 72 bp TACACGGAAGCATCTCTTCTGTGTCAGAACTTGCTTTaGTTAGAAGGAGAATGCAGTTACCCAGAGGATCTT +
Preference number: 3 (lower is better)
Translates to: YTEASLLCQNLL*LEGECSYPEDL
Trigger: AAGATCCTCTGGGTAACTGCATTCTCCTTCTAAGCAAAGCAAGTTCTGACACAGAAGAGATGCTTCCGTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
3UTR GCA 72 bp GACAAAGAGGATAGGTATTCCAGGAGAAAGGAAACCTaGATAGGTTGGAATCTATGTCAGAGACCTTGGACA +
Preference number: 3 (lower is better)
Translates to: DKEDRYSRRKET*IGWNLCQRPWT
Trigger: TGTCCAAGGTCTCTGACATAGATTCCAACCTATGCAGGTTTCCTTTCTCCTGGAATACCTATCCTCTTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679113.1
3UTR CCA 72 bp GAAGCACCTTCTGACTTTCTCCTTGTAGTAATGGACTaGCCTGAGCAGATTTCCAGATCTTTGAACAAATGC +
Preference number: 3 (lower is better)
Translates to: EAPSDFLLVVMD*PEQISRSLNKC
Trigger: GCATTTGTTCAAAGATCTGGAAATCTGCTCAGGCCAGTCCATTACTACAAGGAGAAAGTCAGAAGGTGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581161.5
3UTR CCA 72 bp GTTGGACTACAGCATAAATGTGTTTTGCTCTTAGCCTaGAGATGCCCTTTTGCTTCTTCGGTCAAGAGAACA +
Preference number: 3 (lower is better)
Translates to: VGLQHKCVLLLA*RCPFASSVKRT
Trigger: TGTTCTCTTGACCGAAGAAGCAAAAGGGCATCTCCAGGCTAAGAGCAAAACACATTTATGCTGTAGTCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR CCA 72 bp GATAGGTATTCCAGGAGAAAGGAAACCTGCATAGGTTaGAATCTATGTCAGAGACCTTGGACAAGTCACTCA +
Preference number: 3 (lower is better)
Translates to: DRYSRRKETCIG*NLCQRPWTSHS
Trigger: TGAGTGACTTGTCCAAGGTCTCTGACATAGATTCCAACCTATGCAGGTTTCCTTTCTCCTGGAATACCTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679113.1
3UTR-3UTR CAA 90 bp TATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAAGCACAACTGGACGGTGTaGGAGTATCACCAGTTCTCT +
Preference number: 3 (lower is better)
Translates to: YVPRTFYAFSTERKRHRKHNWTV*EYHQFS
Trigger: AGAGAACTGGTGATACTCCAACACCGTCCAGTTGTG...CTTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
3UTR TCA 72 bp GGTTTTCCAATGAGCGATAGGCCAGAGTCCTCATCATaGACACAGGGACCATACAAATACCAGAAAACTTTT +
Preference number: 3 (lower is better)
Translates to: GFPMSDRPESSS*TQGPYKYQKTF
Trigger: AAAAGTTTTCTGGTATTTGTATGGTCCCTGTGTTCATGATGAGGACTCTGGCCTATCGCTCATTGGAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679113.1
3UTR GCA 72 bp TGGCAGCAGTGTTCACCTCACTTTCGGGCTCTTGAATaGCAAATACAGAGATTTCATACAGAACTTTTGGAT +
Preference number: 3 (lower is better)
Translates to: WQQCSPHFRALE*QIQRFHTELLD
Trigger: ATCCAAAAGTTCTGTATGAAATCTCTGTATTTGGCATTCAAGAGCCCGAAAGTGAGGTGAACACTGCTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581161.5
3UTR GCA 72 bp GAAGAGGCAATAAAGGGCTGCTCTTGTGCTTGTATTTaGTCATCTCTGTTAGTAAGTCTAGACAGCCATCAA +
Preference number: 3 (lower is better)
Translates to: EEAIKGCSCACI*SSLLVSLDSHQ
Trigger: TTGATGGCTGTCTAGACTTACTAACAGAGATGAGCAAATACAAGCACAAGAGCAGCCCTTTATTGCCTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR CCA 72 bp CCATTGCAAAGTGAAGACACGGGTTTAGTGACATTATaGACACCTAAACATTCCTTCGTGATTTCCAGACAG +
Preference number: 3 (lower is better)
Translates to: PLQSEDTGLVTL*TPKHSFVISRQ
Trigger: CTGTCTGGAAATCACGAAGGAATGTTTAGGTGTCCATAATGTCACTAAACCCGTGTCTTCACTTTGCAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581161.5
3UTR-3UTR CAA 90 bp TTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAACACAACTGGACGGTGTaGGAGTATCACCAGTTCTCT +
Preference number: 3 (lower is better)
Translates to: LCSQNFLCLFNRKEKAQKHNWTV*EYHQFS
Trigger: AGAGAACTGGTGATACTCCAACACCGTCCAGTTGTG...TTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
3UTR-3UTR CAA 90 bp ACTGGATCACCACATAAAACCTTCCTCAAGAGTGTGAGGCATGGTTGTACCAAAAGAGATTCAATAAACTaGTTCCAGGTCAATGCTGTC +
Preference number: 3 (lower is better)
Translates to: TGSPHKTFLKSVRHGCTKRDSIN*FQVNAV
Trigger: GACAGCATTGACCTGGAACAAGTTTATTGAATCTCT...TTTGGTACAACCATGCCTCACACTCTTGAGGAAGGTTTTATGTGGTGATCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
3UTR-3UTR CAA 90 bp AAAGTTTTCTTTGCTAAGGAGTATGCTTCATCCACTCTTCTTTTTACTGATGGGGCAATCGTCAAGAGGTaGTCCAAGAGGCTGCACATT +
Preference number: 3 (lower is better)
Translates to: KVFFAKEYASSTLLFTDGAIVKR*SKRLHI
Trigger: AATGTGCAGCCTCTTGGACAACCTCTTGACGATTGC...CCCATCAGTAAAAAGAAGAGTGGATGAAGCATACTCCTTAGCAAAGAAAACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
3UTR TCA 72 bp ATGATATTGGTGATAAGAGGTTTCACAAGCTCATCCTaGATCACAAGGTCAGGCTCCACCAATAAACATGAC +
Preference number: 3 (lower is better)
Translates to: MILVIRGFTSSS*ITRSGSTNKHD
Trigger: GTCATGTTTATTGGTGGAGCCTGACCTTGTGATTCAGGATGAGCTTGTGAAACCTCTTATCACCAATATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
3UTR GCA 72 bp AAGTCTAGACAGCCATCAAGCCTCAGAATCATTTGTTaGCCATCTTCTCCAGATGATATATTCAGGAGTAAC +
Preference number: 3 (lower is better)
Translates to: KSRQPSSLRIIC*PSSPDDIFRSN
Trigger: GTTACTCCTGAATATATCATCTGGAGAAGATGGGCAACAAATGATTCTGAGGCTTGATGGCTGTCTAGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR CCA 72 bp CCTTCTAAAAACGGAAACAGGCAAACTGAAGACCGATaGCAAAGAAGGTTTATTGGAAGGATTAACAGACCA +
Preference number: 3 (lower is better)
Translates to: PSKNGNRQTEDR*QRRFIGRINRP
Trigger: TGGTCTGTTAATCCTTCCAATAAACCTTCTTTGCCATCGGTCTTCAGTTTGCCTGTTTCCGTTTTTAGAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
3UTR-3UTR CAA 90 bp ACTTTCCAGACAGGCAGCAAGCACAGTAATGACTTTTTCATTAGCCAGGATCTTAGAGATTCAATAAACTaGTTCCAGGTCAATGCTGTC +
Preference number: 3 (lower is better)
Translates to: TFQTGSKHSNDFFISQDLRDSIN*FQVNAV
Trigger: GACAGCATTGACCTGGAACAAGTTTATTGAATCTCT...AAGATCCTGGCTAATGAAAAAGTCATTACTGTGCTTGCTGCCTGTCTGGAAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581161.5
3UTR-3UTR CAA 90 bp AAAGTTTTCTTTGCTAAGGAGTATGCTTCATCCACTCTTCTTTTTACTGATGGGTCCTCTATGTGTAGCTaGAACAGGGTGTTGTCCACA +
Preference number: 3 (lower is better)
Translates to: KVFFAKEYASSTLLFTDGSSMCS*NRVLST
Trigger: TGTGGACAACACCCTGTTCAAGCTACACATAGAGGA...CCCATCAGTAAAAAGAAGAGTGGATGAAGCATACTCCTTAGCAAAGAAAACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR-3UTR CAA 90 bp AACAAAGAGAACTGCAACCATTTGGAAAATTTGCAGTATAGACACAAAGGAGCTGGTGATATCACCTTGTaGAGCTTGTCCAGTCTAACC +
Preference number: 3 (lower is better)
Translates to: NKENCNHLENLQYRHKGAGDITL*SLSSLT
Trigger: GGTTAGACTGGACAAGCTCAACAAGGTGATATCACC...AGCTCCTTTGTGTCTATACTGCAAATTTTCCAAATGGTTGCAGTTCTCTTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639487.1
3UTR TCA 72 bp TCAGAGTTCATTTGCTTCAACAGATTATCACTCCCATaGTACCATGACAGGTTCCAAGCTATTCTCAGCATA +
Preference number: 3 (lower is better)
Translates to: SEFICFNRLSLP*YHDRFQAILSI
Trigger: TATGCTGAGAATAGCTTGGAACCTGTCATGGTATCATGGGAGTGATAATCTGTTGAAGCAAATGAACTCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
3UTR-3UTR CAA 90 bp TATTTCCTCCTTTTGGCAATGCTAGAGAGAGGAAGTTCTGTAAGAAGTTACTCTAAAAGGCACAGAAAGTaGTCAGCTGCTATTACTTCT +
Preference number: 3 (lower is better)
Translates to: YFLLLAMLERGSSVRSYSKRHRK*SAAITS
Trigger: AGAAGTAATAGCAGCTGACAACTTTCTGTGCCTTTT...AGAGTAACTTCTTACAGAACTTCCTCTCTCTAGCATTGCCAAAAGGAGGAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000579986.6
ENST00000639487.1
3UTR TCA 72 bp CCCAATATCAGACAGGAAGTTACAGGTGCATTCAATTaGATAAACGGCCTCTGCAGTTCGTTTATAAATACT +
Preference number: 3 (lower is better)
Translates to: PNIRQEVTGAFN*INGLCSSFINT
Trigger: AGTATTTATAAACGAACTGCAGAGGCCGTTTATTCAATTGAATGCACCTGTAACTTCCTGTCTGATATTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581161.5
3UTR TCA 72 bp CTGACTTTCTCAAAACGAGATCAACATCATCTGAGGTaGAGATTTCATATACCTTTTCAACAGTCTCCAACT +
Preference number: 3 (lower is better)
Translates to: LTFSKRDQHHLR*RFHIPFQQSPT
Trigger: AGTTGGAGACTGTTGAAAAGGTATATGAAATCTTCACCTCAGATGATGTTGATCTCGTTTTGAGAAAGTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR TCA 90 bp GGCCAGGGCCACGGTAACAAACGGGAGTGTGATGGCACCAGCTTTCCTCAGGAGCCCTGCCTCCCAGGTTaGAGAGATTCTCGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: GQGHGNKRECDGTSFPQEPCLPG*RDSRAS
Trigger: TGAGGCACGAGAATCTCTTCAACCTGGGAGGCAGGG...CTCCTGAGGAAAGCTGGTGCCATCACACTCCCGTTTGTTACCGTGGCCCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639487.1
CDS-3UTR GCA 90 bp ATATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGTAACAAACGGGAGTATCGCCGCTGTCCAGTaGTTGGCCAGGGCCACGGTA +
Preference number: 4 (lower is better)
Translates to: ISIAAVQCLARATVTNGSIAAVQ*LARATV
Trigger: TACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGAT...ACTCCCGTTTGTTACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGATAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GGCCAGGGCCACGGTAACAAACGGGAGTGTGATGGCACCAGCTTTCCTCAGGAGATGAGGTGGCCGTGGTaGTGTACTTTCCTGGTGACC +
Preference number: 4 (lower is better)
Translates to: GQGHGNKRECDGTSFPQEMRWPW*CTFLVT
Trigger: GGTCACCAGGAAAGTACATCACCACGGCCACCTCAT...CTCCTGAGGAAAGCTGGTGCCATCACACTCCCGTTTGTTACCGTGGCCCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp CAGTGCTTGGCCAGGGCCACGGTAACAAACGGGAGTGTGATGGCACCAGCTTTCCTGTGGGTTGCAGCCTaGACAATGGAATGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: QCLARATVTNGSVMAPAFLWVAA*TMEWRQ
Trigger: CTGCCTCCATTCCATTGTTCAGGCTGCAACCCACAG...GAAAGCTGGTGCCATCACACTCCCGTTTGTTACCGTGGCCCTGGCCAAGCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp GTAAGGTCCGCTCAAGGGACGGCAGGCCATAGAAATGAGGCGCATCCGTCACTTTGTGAGAGGAGAGTGTaGGCTCCATCCCGGAAACGC +
Preference number: 4 (lower is better)
Translates to: VRSAQGTAGHRNEAHPSLCERRV*APSRKR
Trigger: GCGTTTCCGGGATGGAGCTCACACTCTCCTCTCACA...AAGTGACGGATGCGCCTCATTTCTATGGCCTGCCGTCCCTTGAGCGGACCTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR GCA 90 bp AGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGATCGCCGCTGTCCAGTaGTTGGCCAGGGCCACGGTA +
Preference number: 4 (lower is better)
Translates to: RAATTGRCWSITSSLSHGIAAVQ*LARATV
Trigger: TACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGAT...CCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp CCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGCCTGGCCATCTCCTCTaGGTCGCTGGCCTGTGCGCC +
Preference number: 4 (lower is better)
Translates to: PQLDGVGVSPVLSLMGKKPGHLL*VAGLCA
Trigger: GGCGCACAGGCCAGCGACCCAGAGGAGATGGCCAGG...CTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CCA 90 bp TTGACTGCACAAGTGGCTGAAATTCAGTACTCCCCAATGAAGGTGCCACCGTTGCCTGGCCATCTCCTCTaGGTCGCTGGCCTGTGCGCC +
Preference number: 4 (lower is better)
Translates to: LTAQVAEIQYSPMKVPPLPGHLL*VAGLCA
Trigger: GGCGCACAGGCCAGCGACCCAGAGGAGATGGCCAGG...CAACGGTGGCACCTTCATTGGGGAGTACTGAATTTCAGCCACTTGTGCAGTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CCA 90 bp TCTTCTCGTGCCTGTGACTCTGTCAGAACCAAGAGGTCTAACAGTGGGTTTGCACCTGGCCATCTCCTCTaGGTCGCTGGCCTGTGCGCC +
Preference number: 4 (lower is better)
Translates to: SSRACDSVRTKRSNSGFAPGHLL*VAGLCA
Trigger: GGCGCACAGGCCAGCGACCCAGAGGAGATGGCCAGG...TGCAAACCCACTGTTAGACCTCTTGGTTCTGACAGAGTCACAGGCACGAGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CCA 90 bp GGCCAGGGCCACGGTAACAAACGGGAGTGTGATGGCACCAGCTTTCCTCAGGAGGAGAGCTGCCACAACTaGACGGTGTTGGAGTATCAC +
Preference number: 4 (lower is better)
Translates to: GQGHGNKRECDGTSFPQEESCHN*TVLEYH
Trigger: GTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTC...CTCCTGAGGAAAGCTGGTGCCATCACACTCCCGTTTGTTACCGTGGCCCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR TCA 90 bp CCATCCCTCGTAAGGTCCGCTCAAGGGACGGCAGGCCATAGAAATGAGGCGCATCTAATCCCAGTGAAGTaGATCTCACCTCTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: PSLVRSAQGTAGHRNEAHLIPVK*ISPLGP
Trigger: GGGACCCAGAGGTGAGATTCACTTCACTGGGATTAG...ATGCGCCTCATTTCTATGGCCTGCCGTCCCTTGAGCGGACCTTACGAGGGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp CAGTGCTTGGCCAGGGCCACGGTAACAAACGGGAGTGTGATGGCACCAGCTTTCCTAATCCCAGTGAAGTaGATCTCACCTCTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: QCLARATVTNGSVMAPAFLIPVK*ISPLGP
Trigger: GGGACCCAGAGGTGAGATTCACTTCACTGGGATTAG...GAAAGCTGGTGCCATCACACTCCCGTTTGTTACCGTGGCCCTGGCCAAGCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp CAGTGCTTGGCCAGGGCCACGGTAACAAACGGGAGTGTGATGGCACCAGCTTTCCTTGGATCTCGATCCTaGCTTGTCCTAGATGGAGCC +
Preference number: 4 (lower is better)
Translates to: QCLARATVTNGSVMAPAFLGSRS*LVLDGA
Trigger: GGCTCCATCTAGGACAAGTCAGGATCGAGATCCAAG...GAAAGCTGGTGCCATCACACTCCCGTTTGTTACCGTGGCCCTGGCCAAGCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp ATATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGTAACAAACGGGAGTGGGAGCAGAAAGAGATaGATCATGAGGTGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: ISIAAVQCLARATVTNGSGSRKR*IMRWPW
Trigger: CCACGGCCACCTCATGATTCATCTCTTTCTGCTCCC...ACTCCCGTTTGTTACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGATAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR GCA 90 bp AGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGCAGAAGGCCGAGGGCTaGTGCTTCCTGGGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: RAATTGRCWSITSSLSHGQKAEG*CFLGKD
Trigger: ATCCTTCCCCAGGAAGCAGCAGCCCTCGGCCTTCTG...CCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR GCA 90 bp TCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGTGGGTCGCTGGCCTGTaGGCCCAACCACAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: SGNSCYTQLASTLAPLLMWVAGL*AQPQKA
Trigger: GGCCTTCTGTGGTTGGGCGCACAGGCCAGCGACCCA...CATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR GCA 90 bp TGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAATGGGTCGCTGGCCTGTaGGCCCAACCACAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: CREVARLQVTAATHSWLQWVAGL*AQPQKA
Trigger: GGCCTTCTGTGGTTGGGCGCACAGGCCAGCGACCCA...TTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR GCA 90 bp ATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGTAACAAACGGGAGTGTGATGCTGTTTAGTGCGGTGTaGCAAGCCAAGGACTTCAAG +
Preference number: 4 (lower is better)
Translates to: IAAVQCLARATVTNGSVMLFSAV*QAKDFK
Trigger: CTTGAAGTCCTTGGCTTGGCACACCGCACTAAACAG...CATCACACTCCCGTTTGTTACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR GCA 90 bp AGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCATCGCCGCTGTCCAGTaGTTGGCCAGGGCCACGGTA +
Preference number: 4 (lower is better)
Translates to: STSSGNSCYTQLASTLAPIAAVQ*LARATV
Trigger: TACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGAT...GGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp CAGTATACAGGGCAGGACACGTGGCAGACAAGCCTGCACATGTGCAGAACATATATCGCCGCTGTCCAGTaGTTGGCCAGGGCCACGGTA +
Preference number: 4 (lower is better)
Translates to: QYTGQDTWQTSLHMCRTYIAAVQ*LARATV
Trigger: TACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGAT...ATATGTTCTGCACATGTGCAGGCTTGTCTGCCACGTGTCCTGCCCTGTATACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CCA 90 bp GCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGTCTCCTCTGGGTCGCTaGCCTGTGCGCCCAACCACA +
Preference number: 4 (lower is better)
Translates to: AQKVVSCYYFWRAATTGRSPLGR*PVRPTT
Trigger: TGTGGTTGGGCGCACAGGCCAGCGACCCAGAGGAGA...CCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CCA 90 bp GCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGCTGCATCCCAGTCCTaGCCATCTCCTCTGGGTCGC +
Preference number: 4 (lower is better)
Translates to: AATTGRCWSITSSLSHGKAASQS*PSPLGR
Trigger: GCGACCCAGAGGAGATGGCCAGGACTGGGATGCAGC...TTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CCA 90 bp ATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGTAACAAACGGGAGTGTGATGAGCCCGTTTCAAGGGTaGTCAGTGCTGATCCTAATC +
Preference number: 4 (lower is better)
Translates to: IAAVQCLARATVTNGSVMSPFQG*SVLILI
Trigger: GATTAGGATCAGCACTGACCACCCTTGAAACGGGCT...CATCACACTCCCGTTTGTTACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CCA 90 bp ATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGTAACAAACGGGAGTGTCGTGGTGTTCTCCAGTaGCATCTGGGAAGCCAACTT +
Preference number: 4 (lower is better)
Translates to: INRRCPVLGQGHGNKRECRGVLQ*HLGSQL
Trigger: AAGTTGGCTTCCCAGATGCCACTGGAGAACACCACG...ACACTCCCGTTTGTTACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR TCA 90 bp CAGTGCTTGGCCAGGGCCACGGTAACAAACGGGAGTGTGATGGCACCAGCTTTCTTCTTCTCGTGCCTGTaGCTCTGTCAGAACCAAGAG +
Preference number: 4 (lower is better)
Translates to: QCLARATVTNGSVMAPAFFFSCL*LCQNQE
Trigger: CTCTTGGTTCTGACAGAGTCACAGGCACGAGAAGAA...GAAAGCTGGTGCCATCACACTCCCGTTTGTTACCGTGGCCCTGGCCAAGCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp GGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGTGTGAGAGGAGAGTGTaGGCTCCATCCCGGAAACGC +
Preference number: 4 (lower is better)
Translates to: GELPQLDGVGVSPVLSLMCERRV*APSRKR
Trigger: GCGTTTCCGGGATGGAGCTCACACTCTCCTCTCACA...CATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp ATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGTAACAAACGGGAGTGTTTCACAAGCTCATCCTaGATCACAAGGTCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: INRRCPVLGQGHGNKRECFTSSS*ITRSGS
Trigger: GGAGCCTGACCTTGTGATTCAGGATGAGCTTGTGAA...ACACTCCCGTTTGTTACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GCACATGTGCAGAACATATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGACTGACAGCCAGCAGTaGCATCAATGCATTTGCAGC +
Preference number: 4 (lower is better)
Translates to: AHVQNISIAAVQCLARATTDSQQ*HQCICS
Trigger: GCTGCAAATGCATTGATGTCACTGCTGGCTGTCAGT...CGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGATATGTTCTGCACATGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR TCA 90 bp ATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGTAACAAACGGGAGTGTACTGACAGCCAGCAGTaGCATCAATGCATTTGCAGC +
Preference number: 4 (lower is better)
Translates to: INRRCPVLGQGHGNKRECTDSQQ*HQCICS
Trigger: GCTGCAAATGCATTGATGTCACTGCTGGCTGTCAGT...ACACTCCCGTTTGTTACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GCACATGTGCAGAACATATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGTCTGTGCTCTTCTACTaGCAGCCAGCAGTGACATCA +
Preference number: 4 (lower is better)
Translates to: AHVQNISIAAVQCLARATSVLFY*QPAVTS
Trigger: TGATGTCACTGCTGGCTGTCAGTAGAAGAGCACAGA...CGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGATATGTTCTGCACATGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGCCCTGCCTCCCAGGTTaGAGAGATTCTCGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: GELPQLDGVGVSPVLSLMPCLPG*RDSRAS
Trigger: TGAGGCACGAGAATCTCTTCAACCTGGGAGGCAGGG...CATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578780.2
ENST00000639487.1
ENST00000640769.2
CDS-3UTR GCA 90 bp CATGTGCAGAACATATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGTAAAGGCCATTCTGTGGTaGACAAGCATCACCTCTGGC +
Preference number: 4 (lower is better)
Translates to: HVQNISIAAVQCLARATVKAILW*TSITSG
Trigger: GCCAGAGGTGATGCTTGTGCACCACAGAATGGCCTT...TACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGATATGTTCTGCACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR GCA 90 bp ATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGTAACAAACGGGAGTGTCTGTTTAGTGCGGTGTaGCAAGCCAAGGACTTCAAG +
Preference number: 4 (lower is better)
Translates to: INRRCPVLGQGHGNKRECLFSAV*QAKDFK
Trigger: CTTGAAGTCCTTGGCTTGGCACACCGCACTAAACAG...ACACTCCCGTTTGTTACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR GCA 90 bp CAAGGTGTAGCATCCCATGGCACTCAGGAAGAATTAAGGAGCTGCACGAGGTTTATCGCCGCTGTCCAGTaGTTGGCCAGGGCCACGGTA +
Preference number: 4 (lower is better)
Translates to: QGVASHGTQEELRSCTRFIAAVQ*LARATV
Trigger: TACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGAT...AAACCTCGTGCAGCTCCTTAATTCTTCCTGAGTGCCATGGGATGCTACACCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp CACATGTGCAGAACATATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGCGTGGCAGACAAGCCTaGACATGTGCAGAACATATC +
Preference number: 4 (lower is better)
Translates to: HMCRTYQSPLSSAWPGPRRGRQA*TCAEHI
Trigger: GATATGTTCTGCACATGTGCAGGCTTGTCTGCCACG...CCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGATATGTTCTGCACATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp AATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGTAACAAACGGGAGTGTGATTTACTTCTGGAGAGCTaGCACAACTGGACGGTGTTG +
Preference number: 4 (lower is better)
Translates to: NRRCPVLGQGHGNKRECDLLLES*HNWTVL
Trigger: CAACACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAA...ATCACACTCCCGTTTGTTACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CCA 90 bp CACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGTTCTCCTCTGGGTCGCTaGCCTGTGCGCCCAACCACA +
Preference number: 4 (lower is better)
Translates to: HRKLSAAITSGELPQLDGSPLGR*PVRPTT
Trigger: TGTGGTTGGGCGCACAGGCCAGCGACCCAGAGGAGA...ACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CCA 90 bp AAAAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGCCTGGCCATCTCCTCTaGGTCGCTGGCCTGTGCGCC +
Preference number: 4 (lower is better)
Translates to: KRHRKLSAAITSGELPQLPGHLL*VAGLCA
Trigger: GGCGCACAGGCCAGCGACCCAGAGGAGATGGCCAGG...CAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CCA 90 bp TTGACTGCACAAGTGGCTGAAATTCAGTACTCCCCAATGAAGGTGCCACCGTTGGCTGCATCCCAGTCCTaGCCATCTCCTCTGGGTCGC +
Preference number: 4 (lower is better)
Translates to: LTAQVAEIQYSPMKVPPLAASQS*PSPLGR
Trigger: GCGACCCAGAGGAGATGGCCAGGACTGGGATGCAGC...CAACGGTGGCACCTTCATTGGGGAGTACTGAATTTCAGCCACTTGTGCAGTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CCA 90 bp CAGTGCTTGGCCAGGGCCACGGTAACAAACGGGAGTGTGATGGCACCAGCTTTCATGGAGACACAAAACTaGGGAAGACTGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QCLARATVTNGSVMAPAFMETQN*GRLSCW
Trigger: CCAGCAGCTCAGTCTTCCCCAGTTTTGTGTCTCCAT...GAAAGCTGGTGCCATCACACTCCCGTTTGTTACCGTGGCCCTGGCCAAGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CCA 90 bp ATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGTAACAAACGGGAGTGTGATGCCGTTGTTTCTGAGGTaGAGAGAGAACTTGGATCTC +
Preference number: 4 (lower is better)
Translates to: IAAVQCLARATVTNGSVMPLFLR*RENLDL
Trigger: GAGATCCAAGTTCTCTCTCCACCTCAGAAACAACGG...CATCACACTCCCGTTTGTTACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
3UTR CAA 72 bp CATGTGCAGAACATATCAATCGCCGCTGTCCAGTGCTaGGCCAGGGCCACGGTAACAAACGGGAGTGTGATG +
Preference number: 4 (lower is better)
Translates to: HVQNISIAAVQC*ARATVTNGSVM
Trigger: CATCACACTCCCGTTTGTTACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGATATGTTCTGCACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAATGTGAGAGGAGAGTGTaGGCTCCATCCCGGAAACGC +
Preference number: 4 (lower is better)
Translates to: AATTGRCWSITSSLSHGKCERRV*APSRKR
Trigger: GCGTTTCCGGGATGGAGCTCACACTCTCCTCTCACA...TTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp CCGTGGTGTTCTCCAGTGGCATCTGGGAAGCCAACTTTAGGATACACAGCATCATGTGAGAGGAGAGTGTaGGCTCCATCCCGGAAACGC +
Preference number: 4 (lower is better)
Translates to: PWCSPVASGKPTLGYTASCERRV*APSRKR
Trigger: GCGTTTCCGGGATGGAGCTCACACTCTCCTCTCACA...TGATGCTGTGTATCCTAAAGTTGGCTTCCCAGATGCCACTGGAGAACACCACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp AATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGTAACAAACGGGAGTGTGATGACCTCAAGGAGACCTaGCAAGTACTTCACACAGAT +
Preference number: 4 (lower is better)
Translates to: NRRCPVLGQGHGNKRECDDLKET*QVLHTD
Trigger: ATCTGTGTGAAGTACTTGTCAGGTCTCCTTGAGGTC...ATCACACTCCCGTTTGTTACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp AGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGATGAGGTGGCCGTGGTaGTGTACTTTCCTGGTGACC +
Preference number: 4 (lower is better)
Translates to: RAATTGRCWSITSSLSHGMRWPW*CTFLVT
Trigger: GGTCACCAGGAAAGTACATCACCACGGCCACCTCAT...CCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGATGAGGTGGCCGTGGTaGTGTACTTTCCTGGTGACC +
Preference number: 4 (lower is better)
Translates to: GELPQLDGVGVSPVLSLMMRWPW*CTFLVT
Trigger: GGTCACCAGGAAAGTACATCACCACGGCCACCTCAT...CATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGAAGGCAGCAGGGCTCTaGGTTCCTGGACACATGTCT +
Preference number: 4 (lower is better)
Translates to: GELPQLDGVGVSPVLSLMKAAGL*VPGHMS
Trigger: AGACATGTGTCCAGGAACTCAGAGCCCTGCTGCCTT...CATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp AGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAGGCAGCAGGGCTCTaGGTTCCTGGACACATGTCT +
Preference number: 4 (lower is better)
Translates to: RAATTGRCWSITSSLSHGKAAGL*VPGHMS
Trigger: AGACATGTGTCCAGGAACTCAGAGCCCTGCTGCCTT...CCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp GGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGTACATGCACAGCTGCTaGAGGCAGGACACCGACTGT +
Preference number: 4 (lower is better)
Translates to: GELPQLDGVGVSPVLSLMYMHSC*RQDTDC
Trigger: ACAGTCGGTGTCCTGCCTGCAGCAGCTGTGCATGTA...CATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR GCA 90 bp CTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGGCCGAGGGCTGCTaGTTCCTGGGGAAGGATTCT +
Preference number: 4 (lower is better)
Translates to: LPQLDGVGVSPVLSLMGKKAEGC*FLGKDS
Trigger: AGAATCCTTCCCCAGGAAGCAGCAGCCCTCGGCCTT...CTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR GCA 90 bp GCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAAAGGCCGAGGGCTGCTaGTTCCTGGGGAAGGATTCT +
Preference number: 4 (lower is better)
Translates to: AATTGRCWSITSSLSHGKKAEGC*FLGKDS
Trigger: AGAATCCTTCCCCAGGAAGCAGCAGCCCTCGGCCTT...TTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR GCA 90 bp CCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGCAGAAGGCCGAGGGCTaGTGCTTCCTGGGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: PQLDGVGVSPVLSLMGKKQKAEG*CFLGKD
Trigger: ATCCTTCCCCAGGAAGCAGCAGCCCTCGGCCTTCTG...CTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR GCA 90 bp TCTTCTCGTGCCTGTGACTCTGTCAGAACCAAGAGGTCTAACAGTGGGTTTGCACAGAAGGCCGAGGGCTaGTGCTTCCTGGGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: SSRACDSVRTKRSNSGFAQKAEG*CFLGKD
Trigger: ATCCTTCCCCAGGAAGCAGCAGCCCTCGGCCTTCTG...TGCAAACCCACTGTTAGACCTCTTGGTTCTGACAGAGTCACAGGCACGAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR GCA 90 bp GCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGTCCACTAGAGGACGCTaGATCCCAGTCCTGGCCATC +
Preference number: 4 (lower is better)
Translates to: AQKVVSCYYFWRAATTGRSTRGR*IPVLAI
Trigger: GATGGCCAGGACTGGGATGCAGCGTCCTCTAGTGGA...CCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR GCA 90 bp AGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCTCCACTAGAGGACGCTaGATCCCAGTCCTGGCCATC +
Preference number: 4 (lower is better)
Translates to: STSSGNSCYTQLASTLAPSTRGR*IPVLAI
Trigger: GATGGCCAGGACTGGGATGCAGCGTCCTCTAGTGGA...GGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR GCA 90 bp GGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGAATGGAGGCAGTCCTaGAGCCCACTAGCCATGTGT +
Preference number: 4 (lower is better)
Translates to: GELPQLDGVGVSPVLSLMEWRQS*SPLAMC
Trigger: ACACATGGCTAGTGGGCTGCAGGACTGCCTCCATTC...CATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
ENST00000679113.1
CDS-3UTR GCA 90 bp AGGTCCGCTCAAGGGACGGCAGGCCATAGAAATGAGGCGCATCCGTCACTTTCACTGTTTAGTGCGGTGTaGCAAGCCAAGGACTTCAAG +
Preference number: 4 (lower is better)
Translates to: RSAQGTAGHRNEAHPSLSLFSAV*QAKDFK
Trigger: CTTGAAGTCCTTGGCTTGGCACACCGCACTAAACAG...TGAAAGTGACGGATGCGCCTCATTTCTATGGCCTGCCGTCCCTTGAGCGGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR GCA 90 bp AGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAATCGCCGCTGTCCAGTaGTTGGCCAGGGCCACGGTA +
Preference number: 4 (lower is better)
Translates to: RGSTSSGNSCYTQLASTLIAAVQ*LARATV
Trigger: TACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGAT...TAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp CAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGACAAGCCTGCACATGTGCACGTGGCAGACAAGCCTaGACATGTGCAGAACATATC +
Preference number: 4 (lower is better)
Translates to: QAGSIQGRTRGRQACTCARGRQA*TCAEHI
Trigger: GATATGTTCTGCACATGTGCAGGCTTGTCTGCCACG...TGCACATGTGCAGGCTTGTCTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp GCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGTTTCCTGATGAGCCCTaGCAGGACCATCTCGTCCCG +
Preference number: 4 (lower is better)
Translates to: AQKVVSCYYFWRAATTGRFPDEP*QDHLVP
Trigger: CGGGACGAGATGGTCCTGGCAGGGCTCATCAGGAAA...CCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640769.2
CDS-3UTR CCA 90 bp TTCTGGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTACAGGGCAGGACACGTaGCAGACAAGCCTGCACATG +
Preference number: 4 (lower is better)
Translates to: FWRAATTGRCWSITSSLSTGQDT*QTSLHM
Trigger: CATGTGCAGGCTTGTCTGCCACGTGTCCTGCCCTGT...AGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp AGAGAACAGAAAGGAATTGCAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGACAGGGCAGGACACGTaGCAGACAAGCCTGCACATG +
Preference number: 4 (lower is better)
Translates to: REQKGIASWQYTGQDTWQTGQDT*QTSLHM
Trigger: CATGTGCAGGCTTGTCTGCCACGTGTCCTGCCCTGT...CTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAATTCCTTTCTGTTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CCA 90 bp ATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGTAACAAACGGGAGTGTGATGCAGTTCTCTCTCTCATaGGAAAGAAGGGGATCAACA +
Preference number: 4 (lower is better)
Translates to: IAAVQCLARATVTNGSVMQFSLS*ERRGST
Trigger: TGTTGATCCCCTTCTTTCCCATGAGAGAGAGAACTG...CATCACACTCCCGTTTGTTACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CCA 90 bp CACATGTGCAGAACATATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGACAACTGGACGGTGTTaGAGTATCACCAGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: HMCRTYQSPLSSAWPGPRTTGRC*SITSSL
Trigger: GAGAGAACTGGTGATACTCCAACACCGTCCAGTTGT...CCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGATATGTTCTGCACATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR TCA 90 bp ATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGTAACAAACGGGAGTGTAGAGCGAAACACGCATaGCTGGATCACCACATAAAA +
Preference number: 4 (lower is better)
Translates to: INRRCPVLGQGHGNKRECRAKHA*LDHHIK
Trigger: TTTTATGTGGTGATCCAGTCATGCGTGTTTCGCTCT...ACACTCCCGTTTGTTACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR TCA 90 bp GGGACGGCAGGCCATAGAAATGAGGCGCATCCGTCACTTTCAGACACTGGAGCATATTCTCAGCATATCTaGCACCGGCTTCAAGGCCAA +
Preference number: 4 (lower is better)
Translates to: GTAGHRNEAHPSLSDTGAYSQHI*HRLQGQ
Trigger: TTGGCCTTGAAGCCGGTGTCAGATATGCTGAGAATA...TGCTCCAGTGTCTGAAAGTGACGGATGCGCCTCATTTCTATGGCCTGCCGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp ATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGTAACAAACGGGAGTGTGATGAGATTATCACTCCCATaGTACCATGACAGGTTCCAA +
Preference number: 4 (lower is better)
Translates to: IAAVQCLARATVTNGSVMRLSLP*YHDRFQ
Trigger: TTGGAACCTGTCATGGTATCATGGGAGTGATAATCT...CATCACACTCCCGTTTGTTACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp TTCTGGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCTGTGGGTTGCAGCCTaGACAATGGAATGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: FWRAATTGRCWSITSSLSLWVAA*TMEWRQ
Trigger: CTGCCTCCATTCCATTGTTCAGGCTGCAACCCACAG...AGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
ENST00000679113.1
CDS-3UTR TCA 90 bp TGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCTGTGAGAGGAGAGTGTaGGCTCCATCCCGGAAACGC +
Preference number: 4 (lower is better)
Translates to: CYTQLASTLAPLLMTVSFCERRV*APSRKR
Trigger: GCGTTTCCGGGATGGAGCTCACACTCTCCTCTCACA...GAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp TGGTGTTCTCCAGTGGCATCTGGGAAGCCAACTTTAGGATACACAGCATCAGAGTGTGAGAGGAGAGTGTaGGCTCCATCCCGGAAACGC +
Preference number: 4 (lower is better)
Translates to: WCSPVASGKPTLGYTASECERRV*APSRKR
Trigger: GCGTTTCCGGGATGGAGCTCACACTCTCCTCTCACA...CTCTGATGCTGTGTATCCTAAAGTTGGCTTCCCAGATGCCACTGGAGAACACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp AAAGGAATTGCAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGACAAGCCTGCTAATCCCAGTGAAGTaGATCTCACCTCTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: KGIASWQYTGQDTWQTSLLIPVK*ISPLGP
Trigger: GGGACCCAGAGGTGAGATTCACTTCACTGGGATTAG...CAGGCTTGTCTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAATTCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp ACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGCCAGAGTCCTCATCATaGACACAGGGACCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: TSSGNSCYTQLASTLAPLPESSS*TQGPCQ
Trigger: TTGGCAGGGTCCCTGTGTTCATGATGAGGACTCTGG...CAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
CDS-3UTR TCA 90 bp GGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGGGCAGGTTTTCCAATaGGCGATAGGCCAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: GTESCQLLLLLESCHNWTGQVFQ*AIGQSP
Trigger: AGGACTCTGGCCTATCGCTCATTGGAAAACCTGCCC...CGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp AGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCGGGCAGGTTTTCCAATaGGCGATAGGCCAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: STSSGNSCYTQLASTLAPGQVFQ*AIGQSP
Trigger: AGGACTCTGGCCTATCGCTCATTGGAAAACCTGCCC...GGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GGCCATAGAAATGAGGCGCATCCGTCACTTTCAGACACTGGAGCAGTTTCAGAGGGGCAGGTTTTCCAATaGGCGATAGGCCAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: GHRNEAHPSLSDTGAVSEGQVFQ*AIGQSP
Trigger: AGGACTCTGGCCTATCGCTCATTGGAAAACCTGCCC...CTCTGAAACTGCTCCAGTGTCTGAAAGTGACGGATGCGCCTCATTTCTATGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp GGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGTGCCACCGTTGTTTCTaGGGTGGAGAGAGAACTTGG +
Preference number: 4 (lower is better)
Translates to: GELPQLDGVGVSPVLSLMCHRCF*GGERTW
Trigger: CCAAGTTCTCTCTCCACCTCAGAAACAACGGTGGCA...CATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGGGGAGCAGAAAGAGATaGATCATGAGGTGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: AQKVVSCYYFWRAATTGRGSRKR*IMRWPW
Trigger: CCACGGCCACCTCATGATTCATCTCTTTCTGCTCCC...CCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGAAGGCAGCAGGGCTCTaGGTTCCTGGACACATGTCT +
Preference number: 4 (lower is better)
Translates to: AQKVVSCYYFWRAATTGRKAAGL*VPGHMS
Trigger: AGACATGTGTCCAGGAACTCAGAGCCCTGCTGCCTT...CCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp CAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGACAAGCCTGCACATGTGCACCTCTATGTGTAGCTTaGACAGGGTGTTGTCCACAA +
Preference number: 4 (lower is better)
Translates to: QAGSIQGRTRGRQACTCAPLCVA*TGCCPQ
Trigger: TTGTGGACAACACCCTGTTCAAGCTACACATAGAGG...TGCACATGTGCAGGCTTGTCTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR TCA 90 bp ATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGTAACAAACGGGAGTGTATAAAAACCATCTGCTaGACCGTGGTGTTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: INRRCPVLGQGHGNKRECIKTIC*TVVFSS
Trigger: ACTGGAGAACACCACGGTTCAGCAGATGGTTTTTAT...ACACTCCCGTTTGTTACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp GCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGTACATGCACAGCTGCTaGAGGCAGGACACCGACTGT +
Preference number: 4 (lower is better)
Translates to: AQKVVSCYYFWRAATTGRYMHSC*RQDTDC
Trigger: ACAGTCGGTGTCCTGCCTGCAGCAGCTGTGCATGTA...CCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR GCA 90 bp GGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGTACATGCACAGCTGCTaGAGGCAGGACACCGACTGT +
Preference number: 4 (lower is better)
Translates to: GTESCQLLLLLESCHNWTYMHSC*RQDTDC
Trigger: ACAGTCGGTGTCCTGCCTGCAGCAGCTGTGCATGTA...CGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR GCA 90 bp CTGTTTAGTGCGGTGTGCCAAGCCAAGGACTTCAAGGTAACCCCACATGGACCAAAATACATGCACAGCTaGTGCAGGCAGGACACCGAC +
Preference number: 4 (lower is better)
Translates to: LFSAVCQAKDFKVTPHGPKYMHS*CRQDTD
Trigger: GTCGGTGTCCTGCCTGCAGCAGCTGTGCATGTATTT...TGGTCCATGTGGGGTTACCTTGAAGTCCTTGGCTTGGCACACCGCACTAAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR GCA 90 bp CACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGTAAGGCCGAGGGCTGCTaGTTCCTGGGGAAGGATTCT +
Preference number: 4 (lower is better)
Translates to: HRKLSAAITSGELPQLDGKAEGC*FLGKDS
Trigger: AGAATCCTTCCCCAGGAAGCAGCAGCCCTCGGCCTT...ACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR GCA 90 bp CAGCCAGCAGTGACATCAATGCATTTGCAGCTACTCTTTTCAGGATATCTTTGGTGGGTCGCTGGCCTGTaGGCCCAACCACAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: QPAVTSMHLQLLFSGYLWWVAGL*AQPQKA
Trigger: GGCCTTCTGTGGTTGGGCGCACAGGCCAGCGACCCA...CCAAAGATATCCTGAAAAGAGTAGCTGCAAATGCATTGATGTCACTGCTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR GCA 90 bp AGCAATCAGTTCTTTCTGAAGTTGTTGCCTGACAGCAGTCCGGATATCATCTGTTGGGTCGCTGGCCTGTaGGCCCAACCACAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: SNQFFLKLLPDSSPDIICWVAGL*AQPQKA
Trigger: GGCCTTCTGTGGTTGGGCGCACAGGCCAGCGACCCA...ACAGATGATATCCGGACTGCTGTCAGGCAACAACTTCAGAAAGAACTGATTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR GCA 90 bp GAAGAATGTTCACCACAGTTCCCCAGAGCCCACCGGAAATGTTCTGACAACTGTTCCACTAGAGGACGCTaGATCCCAGTCCTGGCCATC +
Preference number: 4 (lower is better)
Translates to: EECSPQFPRAHRKCSDNCSTRGR*IPVLAI
Trigger: GATGGCCAGGACTGGGATGCAGCGTCCTCTAGTGGA...ACAGTTGTCAGAACATTTCCGGTGGGCTCTGGGGAACTGTGGTGAACATTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR GCA 90 bp CACATGTGCAGAACATATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGAGCATCACCTCTGGCTaGTCCAAACTGATACTACTT +
Preference number: 4 (lower is better)
Translates to: HMCRTYQSPLSSAWPGPRSITSG*SKLILL
Trigger: AAGTAGTATCAGTTTGGAGCAGCCAGAGGTGATGCT...CCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGATATGTTCTGCACATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR GCA 90 bp GAAAGGAATTGCAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGACAAGCCTAAGGCCATTCTGTGGTaGACAAGCATCACCTCTGGC +
Preference number: 4 (lower is better)
Translates to: ERNCKLAVYRAGHVADKPKAILW*TSITSG
Trigger: GCCAGAGGTGATGCTTGTGCACCACAGAATGGCCTT...AGGCTTGTCTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAATTCCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR GCA 90 bp CATGTGCAGAACATATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGTAGGTTGTCCAAGAGGCTaGACATTGCTGAAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: HVQNISIAAVQCLARATVGCPRG*TLLKEE
Trigger: CTCTTCTTTCAGCAATGTGCAGCCTCTTGGACAACC...TACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGATATGTTCTGCACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR GCA 90 bp AAAAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGATCGCCGCTGTCCAGTaGTTGGCCAGGGCCACGGTA +
Preference number: 4 (lower is better)
Translates to: KRHRKLSAAITSGELPQLIAAVQ*LARATV
Trigger: TACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGAT...CAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp AGGTCCGCTCAAGGGACGGCAGGCCATAGAAATGAGGCGCATCCGTCACTTTCAACAAGCCTGCACATGTaGAGAACATATCAATCGCCG +
Preference number: 4 (lower is better)
Translates to: RSAQGTAGHRNEAHPSLSTSLHM*RTYQSP
Trigger: CGGCGATTGATATGTTCTGCACATGTGCAGGCTTGT...TGAAAGTGACGGATGCGCCTCATTTCTATGGCCTGCCGTCCCTTGAGCGGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CCA 90 bp TGGGAAAGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACATCTCCTCTGGGTCGCTaGCCTGTGCGCCCAACCACA +
Preference number: 4 (lower is better)
Translates to: WERRGSTLCREVARLQVTSPLGR*PVRPTT
Trigger: TGTGGTTGGGCGCACAGGCCAGCGACCCAGAGGAGA...TGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCTTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CCA 90 bp TGGAGTAAGGACTCACAGCATGGTGTCCAATTACATGAACAGGTAGATGGTACCGCTGCATCCCAGTCCTaGCCATCTCCTCTGGGTCGC +
Preference number: 4 (lower is better)
Translates to: WSKDSQHGVQLHEQVDGTAASQS*PSPLGR
Trigger: GCGACCCAGAGGAGATGGCCAGGACTGGGATGCAGC...GGTACCATCTACCTGTTCATGTAATTGGACACCATGCTGTGAGTCCTTACTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CCA 90 bp AAAAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGCTGCATCCCAGTCCTaGCCATCTCCTCTGGGTCGC +
Preference number: 4 (lower is better)
Translates to: KRHRKLSAAITSGELPQLAASQS*PSPLGR
Trigger: GCGACCCAGAGGAGATGGCCAGGACTGGGATGCAGC...CAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CCA 90 bp CCATCCCTCGTAAGGTCCGCTCAAGGGACGGCAGGCCATAGAAATGAGGCGCATATAAAGGCCATTCTGTaGTGCACAAGCATCACCTCT +
Preference number: 4 (lower is better)
Translates to: PSLVRSAQGTAGHRNEAHIKAIL*CTSITS
Trigger: AGAGGTGATGCTTGTGCACCACAGAATGGCCTTTAT...ATGCGCCTCATTTCTATGGCCTGCCGTCCCTTGAGCGGACCTTACGAGGGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CCA 90 bp GCACATGTGCAGAACATATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGTTTCACTCGTGGCAATaGGTGAGACAACATATGGAG +
Preference number: 4 (lower is better)
Translates to: AHVQNISIAAVQCLARATFHSWQ*VRQHME
Trigger: CTCCATATGTTGTCTCACCCATTGCCACGAGTGAAA...CGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGATATGTTCTGCACATGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CCA 90 bp CACATGTGCAGAACATATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGTTTCACTCGTGGCAATaGGTGAGACAACATATGGAG +
Preference number: 4 (lower is better)
Translates to: HMCRTYQSPLSSAWPGPRFHSWQ*VRQHME
Trigger: CTCCATATGTTGTCTCACCCATTGCCACGAGTGAAA...CCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGATATGTTCTGCACATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CCA 90 bp TGGTGTTCTCCAGTGGCATCTGGGAAGCCAACTTTAGGATACACAGCATCAGAGACAGGGCAGGACACGTaGCAGACAAGCCTGCACATG +
Preference number: 4 (lower is better)
Translates to: WCSPVASGKPTLGYTASETGQDT*QTSLHM
Trigger: CATGTGCAGGCTTGTCTGCCACGTGTCCTGCCCTGT...CTCTGATGCTGTGTATCCTAAAGTTGGCTTCCCAGATGCCACTGGAGAACACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CCA 90 bp TCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGACAGGGCAGGACACGTaGCAGACAAGCCTGCACATG +
Preference number: 4 (lower is better)
Translates to: SSGNSCYTQLASTLAPLLTGQDT*QTSLHM
Trigger: CATGTGCAGGCTTGTCTGCCACGTGTCCTGCCCTGT...CAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp CAGTGCTTGGCCAGGGCCACGGTAACAAACGGGAGTGTGATGGCACCAGCTTTCGTTTTGCTCTTAGCCTaGAGATGCCCTTTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: QCLARATVTNGSVMAPAFVLLLA*RCPFAS
Trigger: AGAAGCAAAAGGGCATCTCCAGGCTAAGAGCAAAAC...GAAAGCTGGTGCCATCACACTCCCGTTTGTTACCGTGGCCCTGGCCAAGCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CCA 90 bp AGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGCGTGGTGTTCTCCAGTaGCATCTGGGAAGCCAACTT +
Preference number: 4 (lower is better)
Translates to: RAATTGRCWSITSSLSHGRGVLQ*HLGSQL
Trigger: AAGTTGGCTTCCCAGATGCCACTGGAGAACACCACG...CCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp AGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGCCATCTGCTGAACCGTaGTGTTCTCCAGTGGCATCT +
Preference number: 4 (lower is better)
Translates to: RAATTGRCWSITSSLSHGPSAEP*CSPVAS
Trigger: AGATGCCACTGGAGAACACCACGGTTCAGCAGATGG...CCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp GGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGAGAGCTGCCACAACTaGACGGTGTTGGAGTATCAC +
Preference number: 4 (lower is better)
Translates to: GELPQLDGVGVSPVLSLMESCHN*TVLEYH
Trigger: GTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTC...CATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp CATCCTGGTGACAGCAGCCCTAACTTCCCTGTGGGTTGCAGCCTGAACAATGGAGTTGCCTCTCCTGAATaGGATCAGCGTAGCAGATTA +
Preference number: 4 (lower is better)
Translates to: HPGDSSPNFPVGCSLNNGVASPE*DQRSRL
Trigger: TAATCTGCTACGCTGATCTCATTCAGGAGAGGCAAC...TCCATTGTTCAGGCTGCAACCCACAGGGAAGTTAGGGCTGCTGTCACCAGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR TCA 90 bp AGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGACTCGTGGCAATGGGTaGGACAACATATGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: RAATTGRCWSITSSLSHGTRGNG*DNIWRS
Trigger: GCTTCTCCATATGTTGTCTCACCCATTGCCACGAGT...CCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR TCA 90 bp ACTCTGGCGTCTATTAGAGGACGCTTTGTATCAGCCCCTTCTTCACTGGTAAGATGTGAGAGGAGAGTGTaGGCTCCATCCCGGAAACGC +
Preference number: 4 (lower is better)
Translates to: TLASIRGRFVSAPSSLVRCERRV*APSRKR
Trigger: GCGTTTCCGGGATGGAGCTCACACTCTCCTCTCACA...TCTTACCAGTGAAGAAGGGGCTGATACAAAGCGTCCTCTAATAGACGCCAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR TCA 90 bp GGCCATAGAAATGAGGCGCATCCGTCACTTTCAGACACTGGAGCAGTTTCAGAGAGGCAAGAACCAAAGTaGCATCCACTCCAAGCTCCC +
Preference number: 4 (lower is better)
Translates to: GHRNEAHPSLSDTGAVSERQEPK*HPLQAP
Trigger: GGGAGCTTGGAGTGGATGTCACTTTGGTTCTTGCCT...CTCTGAAACTGCTCCAGTGTCTGAAAGTGACGGATGCGCCTCATTTCTATGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp TTCTGGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTAGGCAAGAACCAAAGTaGCATCCACTCCAAGCTCCC +
Preference number: 4 (lower is better)
Translates to: FWRAATTGRCWSITSSLSRQEPK*HPLQAP
Trigger: GGGAGCTTGGAGTGGATGTCACTTTGGTTCTTGCCT...AGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGCTAATCCCAGTGAAGTaGATCTCACCTCTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: AQKVVSCYYFWRAATTGRLIPVK*ISPLGP
Trigger: GGGACCCAGAGGTGAGATTCACTTCACTGGGATTAG...CCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp AGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCCTAATCCCAGTGAAGTaGATCTCACCTCTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: SCYTQLASTLAPLLMTVSLIPVK*ISPLGP
Trigger: GGGACCCAGAGGTGAGATTCACTTCACTGGGATTAG...GCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGCTAATCCCAGTGAAGTaGATCTCACCTCTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: GTESCQLLLLLESCHNWTLIPVK*ISPLGP
Trigger: GGGACCCAGAGGTGAGATTCACTTCACTGGGATTAG...CGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GAAAGGAATTGCAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGACAAGCCTCCACCGGAAATGTTCTaGCAACTGTTTGCTAAGGCC +
Preference number: 4 (lower is better)
Translates to: ERNCKLAVYRAGHVADKPPPEMF*QLFAKA
Trigger: GGCCTTAGCAAACAGTTGTCAGAACATTTCCGGTGG...AGGCTTGTCTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAATTCCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp AGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGCCACCGGAAATGTTCTaGCAACTGTTTGCTAAGGCC +
Preference number: 4 (lower is better)
Translates to: RAATTGRCWSITSSLSHGPPEMF*QLFAKA
Trigger: GGCCTTAGCAAACAGTTGTCAGAACATTTCCGGTGG...CCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp CCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGCCAGAGTCCTCATCATaGACACAGGGACCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: PQLDGVGVSPVLSLMGKKPESSS*TQGPCQ
Trigger: TTGGCAGGGTCCCTGTGTTCATGATGAGGACTCTGG...CTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
CDS-3UTR TCA 90 bp TCTTCTCGTGCCTGTGACTCTGTCAGAACCAAGAGGTCTAACAGTGGGTTTGCAGGGCAGGTTTTCCAATaGGCGATAGGCCAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: SSRACDSVRTKRSNSGFAGQVFQ*AIGQSP
Trigger: AGGACTCTGGCCTATCGCTCATTGGAAAACCTGCCC...TGCAAACCCACTGTTAGACCTCTTGGTTCTGACAGAGTCACAGGCACGAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp TGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCGGGCAGGTTTTCCAATaGGCGATAGGCCAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: CYTQLASTLAPLLMTVSFGQVFQ*AIGQSP
Trigger: AGGACTCTGGCCTATCGCTCATTGGAAAACCTGCCC...GAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GCAGGCCATAGAAATGAGGCGCATCCGTCACTTTCAGACACTGGAGCAGTTTCACTTGGATCTCGATCCTaGCTTGTCCTAGATGGAGCC +
Preference number: 4 (lower is better)
Translates to: AGHRNEAHPSLSDTGAVSLGSRS*LVLDGA
Trigger: GGCTCCATCTAGGACAAGTCAGGATCGAGATCCAAG...TGAAACTGCTCCAGTGTCTGAAAGTGACGGATGCGCCTCATTTCTATGGCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp AAGGCCAGAGAGAGTGCAAGACAGGGACAAGGTGAGCTTCAAGAGCTGCTTCTTTGCCACCGTTGTTTCTaGGGTGGAGAGAGAACTTGG +
Preference number: 4 (lower is better)
Translates to: KARESARQGQGELQELLLCHRCF*GGERTW
Trigger: CCAAGTTCTCTCTCCACCTCAGAAACAACGGTGGCA...AAGAAGCAGCTCTTGAAGCTCACCTTGTCCCTGTCTTGCACTCTCTCTGGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp AGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCTGCCACCGTTGTTTCTaGGGTGGAGAGAGAACTTGG +
Preference number: 4 (lower is better)
Translates to: STSSGNSCYTQLASTLAPCHRCF*GGERTW
Trigger: CCAAGTTCTCTCTCCACCTCAGAAACAACGGTGGCA...GGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp CAAGGTGTAGCATCCCATGGCACTCAGGAAGAATTAAGGAGCTGCACGAGGTTTATGAGGTGGCCGTGGTaGTGTACTTTCCTGGTGACC +
Preference number: 4 (lower is better)
Translates to: QGVASHGTQEELRSCTRFMRWPW*CTFLVT
Trigger: GGTCACCAGGAAAGTACATCACCACGGCCACCTCAT...AAACCTCGTGCAGCTCCTTAATTCTTCCTGAGTGCCATGGGATGCTACACCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp TGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAAGGGAGCAGAAAGAGATaGATCATGAGGTGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: CREVARLQVTAATHSWLQGSRKR*IMRWPW
Trigger: CCACGGCCACCTCATGATTCATCTCTTTCTGCTCCC...TTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp TGGGAAGCCAACTTTAGGATACACAGCATCAGAGAGTTGCTCACGGCTCCTCTAGGGAGCAGAAAGAGATaGATCATGAGGTGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: WEANFRIHSIRELLTAPLGSRKR*IMRWPW
Trigger: CCACGGCCACCTCATGATTCATCTCTTTCTGCTCCC...TAGAGGAGCCGTGAGCAACTCTCTGATGCTGTGTATCCTAAAGTTGGCTTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp ATATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGTAACAAACGGGAGTAGAGTCATCAAGAAGTaGAGCCACTGTTGGACTACA +
Preference number: 4 (lower is better)
Translates to: ISIAAVQCLARATVTNGSRVIKK*SHCWTT
Trigger: TGTAGTCCAACAGTGGCTTCACTTCTTGATGACTCT...ACTCCCGTTTGTTACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GAAAGGAATTGCAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGACAAGCCTTCTGTGCTCTTCTACTaGCAGCCAGCAGTGACATCA +
Preference number: 4 (lower is better)
Translates to: ERNCKLAVYRAGHVADKPSVLFY*QPAVTS
Trigger: TGATGTCACTGCTGGCTGTCAGTAGAAGAGCACAGA...AGGCTTGTCTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAATTCCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR TCA 90 bp AATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGTAACAAACGGGAGTGTGATCGACAAGGCCAGGTTTaGAAGAAGCATAAAAACCAT +
Preference number: 4 (lower is better)
Translates to: NRRCPVLGQGHGNKRECDRQGQV*KKHKNH
Trigger: ATGGTTTTTATGCTTCTTTCAAACCTGGCCTTGTCG...ATCACACTCCCGTTTGTTACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGGTGACCGTTGTTTCTaGGGTGGAGAGAGAACTTGG +
Preference number: 4 (lower is better)
Translates to: GTESCQLLLLLESCHNWTGDRCF*GGERTW
Trigger: CCAAGTTCTCTCTCCACCTCAGAAACAACGGTCACC...CGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579986.6
CDS-3UTR GCA 90 bp ACTGGTCCAGAAGAATGTTCACCACAGTTCCCCAGAGCCCACCGGAAATGTTCTAAATACATGCACAGCTaGTGCAGGCAGGACACCGAC +
Preference number: 4 (lower is better)
Translates to: TGPEECSPQFPRAHRKCSKYMHS*CRQDTD
Trigger: GTCGGTGTCCTGCCTGCAGCAGCTGTGCATGTATTT...AGAACATTTCCGGTGGGCTCTGGGGAACTGTGGTGAACATTCTTCTGGACCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR GCA 90 bp CAGTCCTGCAGCCCACTAGCCATGTGTGTTATCTTCAGAGTGAGGATGTCCTCTAAATACATGCACAGCTaGTGCAGGCAGGACACCGAC +
Preference number: 4 (lower is better)
Translates to: QSCSPLAMCVIFRVRMSSKYMHS*CRQDTD
Trigger: GTCGGTGTCCTGCCTGCAGCAGCTGTGCATGTATTT...AGAGGACATCCTCACTCTGAAGATAACACACATGGCTAGTGGGCTGCAGGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR GCA 90 bp GGCCATAGAAATGAGGCGCATCCGTCACTTTCAGACACTGGAGCAGTTTCAGAGAAGGCCATTCTGTGGTaGACAAGCATCACCTCTGGC +
Preference number: 4 (lower is better)
Translates to: GHRNEAHPSLSDTGAVSEKAILW*TSITSG
Trigger: GCCAGAGGTGATGCTTGTGCACCACAGAATGGCCTT...CTCTGAAACTGCTCCAGTGTCTGAAAGTGACGGATGCGCCTCATTTCTATGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR GCA 90 bp AATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGTAACAAACGGGAGTGTGATTGCTTAGAAGGAGAATaGAGTTACCCAGAGGATCTT +
Preference number: 4 (lower is better)
Translates to: NRRCPVLGQGHGNKRECDCLEGE*SYPEDL
Trigger: AAGATCCTCTGGGTAACTGCATTCTCCTTCTAAGCA...ATCACACTCCCGTTTGTTACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR GCA 90 bp TTCTGGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTAGCCCAAAGGGCAGCTaGTCCAATCCTCTGAGCATT +
Preference number: 4 (lower is better)
Translates to: FWRAATTGRCWSITSSLSSPKGS*SNPLSI
Trigger: AATGCTCAGAGGATTGGAGCAGCTGCCCTTTGGGCT...AGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp AAAGGAATTGCAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGACAAGCCTGTTACTTCTGGAGAGCTaGCACAACTGGACGGTGTTG +
Preference number: 4 (lower is better)
Translates to: KGIASWQYTGQDTWQTSLLLLES*HNWTVL
Trigger: CAACACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAA...CAGGCTTGTCTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAATTCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TGCGAGAGCGAAACACGCATGACTGGATCACCACATAAAACCTTCCTCAAGAGTTTTCCTGATGAGCCCTaGCAGGACCATCTCGTCCCG +
Preference number: 4 (lower is better)
Translates to: CESETRMTGSPHKTFLKSFPDEP*QDHLVP
Trigger: CGGGACGAGATGGTCCTGGCAGGGCTCATCAGGAAA...ACTCTTGAGGAAGGTTTTATGTGGTGATCCAGTCATGCGTGTTTCGCTCTCGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581161.5
CDS-3UTR CCA 90 bp AGGTCCGCTCAAGGGACGGCAGGCCATAGAAATGAGGCGCATCCGTCACTTTCAGGAAGACTGAGCTGCTaGAATTGTAGTTCCAATGTG +
Preference number: 4 (lower is better)
Translates to: RSAQGTAGHRNEAHPSLSGRLSC*NCSSNV
Trigger: CACATTGGAACTACAATTCCAGCAGCTCAGTCTTCC...TGAAAGTGACGGATGCGCCTCATTTCTATGGCCTGCCGTCCCTTGAGCGGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CCA 90 bp AGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAACAGGGCAGGACACGTaGCAGACAAGCCTGCACATG +
Preference number: 4 (lower is better)
Translates to: RGSTSSGNSCYTQLASTLTGQDT*QTSLHM
Trigger: CATGTGCAGGCTTGTCTGCCACGTGTCCTGCCCTGT...TAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp GCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAACGTGGTGTTCTCCAGTaGCATCTGGGAAGCCAACTT +
Preference number: 4 (lower is better)
Translates to: AATTGRCWSITSSLSHGKRGVLQ*HLGSQL
Trigger: AAGTTGGCTTCCCAGATGCCACTGGAGAACACCACG...TTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp TTCTGGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCCATCTGCTGAACCGTaGTGTTCTCCAGTGGCATCT +
Preference number: 4 (lower is better)
Translates to: FWRAATTGRCWSITSSLSPSAEP*CSPVAS
Trigger: AGATGCCACTGGAGAACACCACGGTTCAGCAGATGG...AGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCCAGAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp AGAGAACAGAAAGGAATTGCAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGCCATCTGCTGAACCGTaGTGTTCTCCAGTGGCATCT +
Preference number: 4 (lower is better)
Translates to: REQKGIASWQYTGQDTWQPSAEP*CSPVAS
Trigger: AGATGCCACTGGAGAACACCACGGTTCAGCAGATGG...CTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAATTCCTTTCTGTTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CCA 90 bp CAGTCCTGCAGCCCACTAGCCATGTGTGTTATCTTCAGAGTGAGGATGTCCTCTCCATCTGCTGAACCGTaGTGTTCTCCAGTGGCATCT +
Preference number: 4 (lower is better)
Translates to: QSCSPLAMCVIFRVRMSSPSAEP*CSPVAS
Trigger: AGATGCCACTGGAGAACACCACGGTTCAGCAGATGG...AGAGGACATCCTCACTCTGAAGATAACACACATGGCTAGTGGGCTGCAGGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CCA 90 bp ACAAACGGGAGTGTGATGGCACCAGCTTTCCTCAGGAGCATGGCCAGAAGATTACCATCTGCTGAACCGTaGTGTTCTCCAGTGGCATCT +
Preference number: 4 (lower is better)
Translates to: TNGSVMAPAFLRSMARRLPSAEP*CSPVAS
Trigger: AGATGCCACTGGAGAACACCACGGTTCAGCAGATGG...TAATCTTCTGGCCATGCTCCTGAGGAAAGCTGGTGCCATCACACTCCCGTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CCA 90 bp GGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGAGAGCTGCCACAACTaGACGGTGTTGGAGTATCAC +
Preference number: 4 (lower is better)
Translates to: GTESCQLLLLLESCHNWTESCHN*TVLEYH
Trigger: GTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTC...CGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp ACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGGAGAGCTGCCACAACTaGACGGTGTTGGAGTATCAC +
Preference number: 4 (lower is better)
Translates to: TSSGNSCYTQLASTLAPLESCHN*TVLEYH
Trigger: GTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTC...CAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp AGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCGAGAGCTGCCACAACTaGACGGTGTTGGAGTATCAC +
Preference number: 4 (lower is better)
Translates to: SCYTQLASTLAPLLMTVSESCHN*TVLEYH
Trigger: GTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTC...GCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp TTCTGGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTGAGAGCTGCCACAACTaGACGGTGTTGGAGTATCAC +
Preference number: 4 (lower is better)
Translates to: FWRAATTGRCWSITSSLSESCHN*TVLEYH
Trigger: GTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTC...AGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCCAGAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp ATTGCAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGACAAGCCTGCACATGAGCTGCTATTACTTCTaGAGAGCTGCCACAACTGGA +
Preference number: 4 (lower is better)
Translates to: IASWQYTGQDTWQTSLHMSCYYF*RAATTG
Trigger: TCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCT...CATGTGCAGGCTTGTCTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR TCA 90 bp CCATCCCTCGTAAGGTCCGCTCAAGGGACGGCAGGCCATAGAAATGAGGCGCATATATCCAAAGGTGAATaGACGGATATCCTGGAGTTT +
Preference number: 4 (lower is better)
Translates to: PSLVRSAQGTAGHRNEAHISKGE*TDILEF
Trigger: AAACTCCAGGATATCCGTTCATTCACCTTTGGATAT...ATGCGCCTCATTTCTATGGCCTGCCGTCCCTTGAGCGGACCTTACGAGGGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp GCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAACTCGTGGCAATGGGTaGGACAACATATGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: AATTGRCWSITSSLSHGKTRGNG*DNIWRS
Trigger: GCTTCTCCATATGTTGTCTCACCCATTGCCACGAGT...TTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR TCA 90 bp GCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGCCTTCCTCAAGAGTGTaGGGCATGGTTGTACCAAAC +
Preference number: 4 (lower is better)
Translates to: AQKVVSCYYFWRAATTGRPSSRV*GMVVPN
Trigger: GTTTGGTACAACCATGCCTCACACTCTTGAGGAAGG...CCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
CDS-3UTR TCA 90 bp ATTGCAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGACAAGCCTGCACATGAGAGCGAAACACGCATaGCTGGATCACCACATAAAA +
Preference number: 4 (lower is better)
Translates to: IASWQYTGQDTWQTSLHMRAKHA*LDHHIK
Trigger: TTTTATGTGGTGATCCAGTCATGCGTGTTTCGCTCT...CATGTGCAGGCTTGTCTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR TCA 90 bp GGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGCGGAAACAGGCAAACTaGAGACCGATGGCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: GTESCQLLLLLESCHNWTRKQAN*RPMAKK
Trigger: CTTCTTTGCCATCGGTCTTCAGTTTGCCTGTTTCCG...CGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAACGGAAACAGGCAAACTaGAGACCGATGGCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: AATTGRCWSITSSLSHGKRKQAN*RPMAKK
Trigger: CTTCTTTGCCATCGGTCTTCAGTTTGCCTGTTTCCG...TTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp ACTGGTCCAGAAGAATGTTCACCACAGTTCCCCAGAGCCCACCGGAAATGTTCTCGGAAACAGGCAAACTaGAGACCGATGGCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: TGPEECSPQFPRAHRKCSRKQAN*RPMAKK
Trigger: CTTCTTTGCCATCGGTCTTCAGTTTGCCTGTTTCCG...AGAACATTTCCGGTGGGCTCTGGGGAACTGTGGTGAACATTCTTCTGGACCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp CTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGCGGAAACAGGCAAACTaGAGACCGATGGCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: LPQLDGVGVSPVLSLMGKRKQAN*RPMAKK
Trigger: CTTCTTTGCCATCGGTCTTCAGTTTGCCTGTTTCCG...CTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp AGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGTATTCTCAGCATATCTaGCACCGGCTTCAAGGCCAA +
Preference number: 4 (lower is better)
Translates to: RAATTGRCWSITSSLSHGYSQHI*HRLQGQ
Trigger: TTGGCCTTGAAGCCGGTGTCAGATATGCTGAGAATA...CCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000679113.1
CDS-3UTR TCA 90 bp CTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGTTCTTCTCGTGCCTGTaGCTCTGTCAGAACCAAGAG +
Preference number: 4 (lower is better)
Translates to: LPQLDGVGVSPVLSLMGKFFSCL*LCQNQE
Trigger: CTCTTGGTTCTGACAGAGTCACAGGCACGAGAAGAA...CTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGTATCTAGAGGCTTTGTaGGAGGAGAGTGTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: AQKVVSCYYFWRAATTGRYLEAL*EESVSS
Trigger: GGAGCTCACACTCTCCTCTCACAAAGCCTCTAGATA...CCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp ACAGAAAGGAATTGCAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGACAAGTATCTAGAGGCTTTGTaGGAGGAGAGTGTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: TERNCKLAVYRAGHVADKYLEAL*EESVSS
Trigger: GGAGCTCACACTCTCCTCTCACAAAGCCTCTAGATA...CTTGTCTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAATTCCTTTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp AGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCTATCTAGAGGCTTTGTaGGAGGAGAGTGTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: STSSGNSCYTQLASTLAPYLEAL*EESVSS
Trigger: GGAGCTCACACTCTCCTCTCACAAAGCCTCTAGATA...GGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp ACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTATCTAGAGGCTTTGTaGGAGGAGAGTGTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: TSSGNSCYTQLASTLAPLYLEAL*EESVSS
Trigger: GGAGCTCACACTCTCCTCTCACAAAGCCTCTAGATA...CAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp TCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGAGGCAAGAACCAAAGTaGCATCCACTCCAAGCTCCC +
Preference number: 4 (lower is better)
Translates to: SSGNSCYTQLASTLAPLLRQEPK*HPLQAP
Trigger: GGGAGCTTGGAGTGGATGTCACTTTGGTTCTTGCCT...CAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp TGGTGTTCTCCAGTGGCATCTGGGAAGCCAACTTTAGGATACACAGCATCAGAGAGGCAAGAACCAAAGTaGCATCCACTCCAAGCTCCC +
Preference number: 4 (lower is better)
Translates to: WCSPVASGKPTLGYTASERQEPK*HPLQAP
Trigger: GGGAGCTTGGAGTGGATGTCACTTTGGTTCTTGCCT...CTCTGATGCTGTGTATCCTAAAGTTGGCTTCCCAGATGCCACTGGAGAACACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp AATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGTAACAAACGGGAGTGTGATATATGTTCTTCACTATaGCTACCCAAAGGCAAGAAC +
Preference number: 4 (lower is better)
Translates to: NRRCPVLGQGHGNKRECDICSSL*LPKGKN
Trigger: GTTCTTGCCTTTGGGTAGTCATAGTGAAGAACATAT...ATCACACTCCCGTTTGTTACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp CACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGGCTAATCCCAGTGAAGTaGATCTCACCTCTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: HNWTVLEYHQFSLSWERRLIPVK*ISPLGP
Trigger: GGGACCCAGAGGTGAGATTCACTTCACTGGGATTAG...CCTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp AGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCCACCGGAAATGTTCTaGCAACTGTTTGCTAAGGCC +
Preference number: 4 (lower is better)
Translates to: STSSGNSCYTQLASTLAPPPEMF*QLFAKA
Trigger: GGCCTTAGCAAACAGTTGTCAGAACATTTCCGGTGG...GGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GGCCATAGAAATGAGGCGCATCCGTCACTTTCAGACACTGGAGCAGTTTCAGAGCCACCGGAAATGTTCTaGCAACTGTTTGCTAAGGCC +
Preference number: 4 (lower is better)
Translates to: GHRNEAHPSLSDTGAVSEPPEMF*QLFAKA
Trigger: GGCCTTAGCAAACAGTTGTCAGAACATTTCCGGTGG...CTCTGAAACTGCTCCAGTGTCTGAAAGTGACGGATGCGCCTCATTTCTATGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp TTCTGGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCCACCGGAAATGTTCTaGCAACTGTTTGCTAAGGCC +
Preference number: 4 (lower is better)
Translates to: FWRAATTGRCWSITSSLSPPEMF*QLFAKA
Trigger: GGCCTTAGCAAACAGTTGTCAGAACATTTCCGGTGG...AGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp AAATGTTCTGACAACTGTTTGCTAAGGCCACACAGCCCGTTTCAAGGGTGGTCACCAGAGTCCTCATCATaGACACAGGGACCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: KCSDNCLLRPHSPFQGWSPESSS*TQGPCQ
Trigger: TTGGCAGGGTCCCTGTGTTCATGATGAGGACTCTGG...TGACCACCCTTGAAACGGGCTGTGTGGCCTTAGCAAACAGTTGTCAGAACATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp CATCCGTCACTTTCAGACACTGGAGCAGTTTCAGAGCCAGCTGCGTTTGAAAAACCAGAGTCCTCATCATaGACACAGGGACCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: HPSLSDTGAVSEPAAFEKPESSS*TQGPCQ
Trigger: TTGGCAGGGTCCCTGTGTTCATGATGAGGACTCTGG...TTTTTCAAACGCAGCTGGCTCTGAAACTGCTCCAGTGTCTGAAAGTGACGGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp CCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGCTTGGATCTCGATCCTaGCTTGTCCTAGATGGAGCC +
Preference number: 4 (lower is better)
Translates to: PQLDGVGVSPVLSLMGKKLGSRS*LVLDGA
Trigger: GGCTCCATCTAGGACAAGTCAGGATCGAGATCCAAG...CTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp TCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGCTTGGATCTCGATCCTaGCTTGTCCTAGATGGAGCC +
Preference number: 4 (lower is better)
Translates to: SSGNSCYTQLASTLAPLLLGSRS*LVLDGA
Trigger: GGCTCCATCTAGGACAAGTCAGGATCGAGATCCAAG...CAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp CCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGTGCCACCGTTGTTTCTaGGGTGGAGAGAGAACTTGG +
Preference number: 4 (lower is better)
Translates to: PQLDGVGVSPVLSLMGKKCHRCF*GGERTW
Trigger: CCAAGTTCTCTCTCCACCTCAGAAACAACGGTGGCA...CTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCATCCTGCCACCGTTGTTTCTaGGGTGGAGAGAGAACTTGG +
Preference number: 4 (lower is better)
Translates to: GFNFSSPVDDCQLQGVASCHRCF*GGERTW
Trigger: CCAAGTTCTCTCTCCACCTCAGAAACAACGGTGGCA...GGATGCTACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp AGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAGTACTCCCCAATaGAGGTGCCACCGTTGTTTC +
Preference number: 4 (lower is better)
Translates to: SCYTQLASTLAPLLMTVSFSTPQ*RCHRCF
Trigger: GAAACAACGGTGGCACCTTCATTGGGGAGTACTGAA...GCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp ACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAATGAGGTGGCCGTGGTaGTGTACTTTCCTGGTGACC +
Preference number: 4 (lower is better)
Translates to: TAGFNFSSPVDDCQLQGVMRWPW*CTFLVT
Trigger: GGTCACCAGGAAAGTACATCACCACGGCCACCTCAT...TACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp CTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAATGAGGTGGCCGTGGTaGTGTACTTTCCTGGTGACC +
Preference number: 4 (lower is better)
Translates to: LHTAGFNFSSPVDDCQLQMRWPW*CTFLVT
Trigger: GGTCACCAGGAAAGTACATCACCACGGCCACCTCAT...TTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp AGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGGAAAGAGATGAATCATaGGGTGGCCGTGGTGATGTA +
Preference number: 4 (lower is better)
Translates to: RAATTGRCWSITSSLSHGERDES*GGRGDV
Trigger: TACATCACCACGGCCACCTCATGATTCATCTCTTTC...CCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GTTTCTTCTCGTGCCTGTGACTCTGTCAGAACCAAGAGGTCTAACAGTGGGTTTGGGAGCAGAAAGAGATaGATCATGAGGTGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: VSSRACDSVRTKRSNSGFGSRKR*IMRWPW
Trigger: CCACGGCCACCTCATGATTCATCTCTTTCTGCTCCC...AAACCCACTGTTAGACCTCTTGGTTCTGACAGAGTCACAGGCACGAGAAGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR TCA 90 bp AAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGAGGGAGCAGAAAGAGATaGATCATGAGGTGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: KAQKVVSCYYFWRAATTGGSRKR*IMRWPW
Trigger: CCACGGCCACCTCATGATTCATCTCTTTCTGCTCCC...TCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp AAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGAAAGGCAGCAGGGCTCTaGGTTCCTGGACACATGTCT +
Preference number: 4 (lower is better)
Translates to: KAQKVVSCYYFWRAATTGKAAGL*VPGHMS
Trigger: AGACATGTGTCCAGGAACTCAGAGCCCTGCTGCCTT...TCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp CATCCTGGTGACAGCAGCCCTAACTTCCCTGTGGGTTGCAGCCTGAACAATGGAAGAGTCATCAAGAAGTaGAGCCACTGTTGGACTACA +
Preference number: 4 (lower is better)
Translates to: HPGDSSPNFPVGCSLNNGRVIKK*SHCWTT
Trigger: TGTAGTCCAACAGTGGCTTCACTTCTTGATGACTCT...TCCATTGTTCAGGCTGCAACCCACAGGGAAGTTAGGGCTGCTGTCACCAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR TCA 90 bp AGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCACTGACAGCCAGCAGTaGCATCAATGCATTTGCAGC +
Preference number: 4 (lower is better)
Translates to: SCYTQLASTLAPLLMTVSTDSQQ*HQCICS
Trigger: GCTGCAAATGCATTGATGTCACTGCTGGCTGTCAGT...GCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp ACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTCTGTGCTCTTCTACTaGCAGCCAGCAGTGACATCA +
Preference number: 4 (lower is better)
Translates to: TSSGNSCYTQLASTLAPLSVLFY*QPAVTS
Trigger: TGATGTCACTGCTGGCTGTCAGTAGAAGAGCACAGA...CAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp TTCTGGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTAAGACAGGGACAAGGTaGGCTTCAAGAGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: FWRAATTGRCWSITSSLSKTGTR*ASRAAS
Trigger: AGAAGCAGCTCTTGAAGCTCACCTTGTCCCTGTCTT...AGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp CGGCGCACCATACTACATTCTGACTGGTCCAGAAGAATGTTCACCACAGTTCCCAAGACAGGGACAAGGTaGGCTTCAAGAGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: RRTILHSDWSRRMFTTVPKTGTR*ASRAAS
Trigger: AGAAGCAGCTCTTGAAGCTCACCTTGTCCCTGTCTT...GGGAACTGTGGTGAACATTCTTCTGGACCAGTCAGAATGTAGTATGGTGCGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR TCA 90 bp GGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGCCTCTATGTGTAGCTTaGACAGGGTGTTGTCCACAA +
Preference number: 4 (lower is better)
Translates to: GELPQLDGVGVSPVLSLMPLCVA*TGCCPQ
Trigger: TTGTGGACAACACCCTGTTCAAGCTACACATAGAGG...CATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GTTTGGGCAGGGGAGCAGAAAGAGATGAATCATGAGGTGGCCGTGGTGATGTACCCTCTATGTGTAGCTTaGACAGGGTGTTGTCCACAA +
Preference number: 4 (lower is better)
Translates to: VWAGEQKEMNHEVAVVMYPLCVA*TGCCPQ
Trigger: TTGTGGACAACACCCTGTTCAAGCTACACATAGAGG...GTACATCACCACGGCCACCTCATGATTCATCTCTTTCTGCTCCCCTGCCCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR GCA 90 bp ATATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGTAACAAACGGGAGTAACCAAATGTTGGACTaGTGGGGGATACTTAACCAA +
Preference number: 4 (lower is better)
Translates to: ISIAAVQCLARATVTNGSNQMLD*WGILNQ
Trigger: TTGGTTAAGTATCCCCCAGCAGTCCAACATTTGGTT...ACTCCCGTTTGTTACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581161.5
CDS-3UTR GCA 90 bp CGGCGCACCATACTACATTCTGACTGGTCCAGAAGAATGTTCACCACAGTTCCCTGTAATGCCAGGCGATaGTTTCCATCTCCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: RRTILHSDWSRRMFTTVPCNARR*FPSPKA
Trigger: GGCCTTTGGAGATGGAAAGCATCGCCTGGCATTACA...GGGAACTGTGGTGAACATTCTTCTGGACCAGTCAGAATGTAGTATGGTGCGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR GCA 90 bp GCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGTGTAATGCCAGGCGATaGTTTCCATCTCCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: AQKVVSCYYFWRAATTGRCNARR*FPSPKA
Trigger: GGCCTTTGGAGATGGAAAGCATCGCCTGGCATTACA...CCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR GCA 90 bp GTTTCTTCTCGTGCCTGTGACTCTGTCAGAACCAAGAGGTCTAACAGTGGGTTTTACATGCACAGCTGCTaGAGGCAGGACACCGACTGT +
Preference number: 4 (lower is better)
Translates to: VSSRACDSVRTKRSNSGFYMHSC*RQDTDC
Trigger: ACAGTCGGTGTCCTGCCTGCAGCAGCTGTGCATGTA...AAACCCACTGTTAGACCTCTTGGTTCTGACAGAGTCACAGGCACGAGAAGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR GCA 90 bp TCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGAAATACATGCACAGCTaGTGCAGGCAGGACACCGAC +
Preference number: 4 (lower is better)
Translates to: SGNSCYTQLASTLAPLLMKYMHS*CRQDTD
Trigger: GTCGGTGTCCTGCCTGCAGCAGCTGTGCATGTATTT...CATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR GCA 90 bp ATTGCAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGACAAGCCTGCACATGTGTTTCTTAAATACATaGACAGCTGCTGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: IASWQYTGQDTWQTSLHMCFLNT*TAAAGR
Trigger: CCTGCCTGCAGCAGCTGTGCATGTATTTAAGAAACA...CATGTGCAGGCTTGTCTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR GCA 90 bp AGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGAATGGAGGCAGTCCTaGAGCCCACTAGCCATGTGT +
Preference number: 4 (lower is better)
Translates to: RGSTSSGNSCYTQLASTLEWRQS*SPLAMC
Trigger: ACACATGGCTAGTGGGCTGCAGGACTGCCTCCATTC...TAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000679113.1
CDS-3UTR GCA 90 bp TGCGAGAGCGAAACACGCATGACTGGATCACCACATAAAACCTTCCTCAAGAGTGAATGGAGGCAGTCCTaGAGCCCACTAGCCATGTGT +
Preference number: 4 (lower is better)
Translates to: CESETRMTGSPHKTFLKSEWRQS*SPLAMC
Trigger: ACACATGGCTAGTGGGCTGCAGGACTGCCTCCATTC...ACTCTTGAGGAAGGTTTTATGTGGTGATCCAGTCATGCGTGTTTCGCTCTCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR GCA 90 bp GACAGGTTCCAAGCTATTCTCAGCATATCTGACACCGGCTTCAAGGCCAAACAAGAATGGAGGCAGTCCTaGAGCCCACTAGCCATGTGT +
Preference number: 4 (lower is better)
Translates to: DRFQAILSISDTGFKAKQEWRQS*SPLAMC
Trigger: ACACATGGCTAGTGGGCTGCAGGACTGCCTCCATTC...TTGTTTGGCCTTGAAGCCGGTGTCAGATATGCTGAGAATAGCTTGGAACCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR GCA 90 bp ACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGCTGTTTAGTGCGGTGTaGCAAGCCAAGGACTTCAAG +
Preference number: 4 (lower is better)
Translates to: TSSGNSCYTQLASTLAPLLFSAV*QAKDFK
Trigger: CTTGAAGTCCTTGGCTTGGCACACCGCACTAAACAG...CAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000679113.1
CDS-3UTR GCA 90 bp CATGTGCAGAACATATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGTAACCAATAAACATGACTaGAGAAGCCTGGACAAAGAG +
Preference number: 4 (lower is better)
Translates to: HVQNISIAAVQCLARATVTNKHD*RSLDKE
Trigger: CTCTTTGTCCAGGCTTCTGCAGTCATGTTTATTGGT...TACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGATATGTTCTGCACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp GTAAGAAGTTACTCTTCTGAATTACTCCTTTACAGTCATGCGACAAGGCCAGGTATCGCCGCTGTCCAGTaGTTGGCCAGGGCCACGGTA +
Preference number: 4 (lower is better)
Translates to: VRSYSSELLLYSHATRPGIAAVQ*LARATV
Trigger: TACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGAT...ACCTGGCCTTGTCGCATGACTGTAAAGGAGTAATTCAGAAGAGTAACTTCTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000639487.1
CDS-3UTR GCA 90 bp GCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAACAGCATCAGAGAGTTaGTCACGGCTCCTCTATGTG +
Preference number: 4 (lower is better)
Translates to: AATTGRCWSITSSLSHGKTASES*SRLLYV
Trigger: CACATAGAGGAGCCGTGAGCAACTCTCTGATGCTGT...TTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp ATTGCAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGACAAGCCTGCACATGACTCCTTTACAGTCATaGGACAAGGCCAGGTTTGAA +
Preference number: 4 (lower is better)
Translates to: IASWQYTGQDTWQTSLHMTPLQS*DKARFE
Trigger: TTCAAACCTGGCCTTGTCGCATGACTGTAAAGGAGT...CATGTGCAGGCTTGTCTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGAGCCCAAAGGGCAGCTaGTCCAATCCTCTGAGCATT +
Preference number: 4 (lower is better)
Translates to: SGNSCYTQLASTLAPLLMSPKGS*SNPLSI
Trigger: AATGCTCAGAGGATTGGAGCAGCTGCCCTTTGGGCT...CATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp GGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCATCCAGCCCAAAGGGCAGCTaGTCCAATCCTCTGAGCATT +
Preference number: 4 (lower is better)
Translates to: GFNFSSPVDDCQLQGVASSPKGS*SNPLSI
Trigger: AATGCTCAGAGGATTGGAGCAGCTGCCCTTTGGGCT...GGATGCTACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp CCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGAGCCCAAAGGGCAGCTaGTCCAATCCTCTGAGCATT +
Preference number: 4 (lower is better)
Translates to: PQLDGVGVSPVLSLMGKKSPKGS*SNPLSI
Trigger: AATGCTCAGAGGATTGGAGCAGCTGCCCTTTGGGCT...CTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp GGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGTCTTCAGGTAACAGCTaGTACACACAGCTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: GELPQLDGVGVSPVLSLMSSGNS*YTQLAS
Trigger: TGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGA...CATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp AGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCTTACTTCTGGAGAGCTaGCACAACTGGACGGTGTTG +
Preference number: 4 (lower is better)
Translates to: STSSGNSCYTQLASTLAPLLLES*HNWTVL
Trigger: CAACACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAA...GGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp CATGTGCAGAACATATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGTACAGAAAGTTGTCAGCTaGTATTACTTCTGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: HVQNISIAAVQCLARATVQKVVS*YYFWRA
Trigger: AGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTG...TACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGATATGTTCTGCACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp AGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGGGGATTTCACCAAGTTaGCCAAGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: RAATTGRCWSITSSLSHGGISPS*PSWSQT
Trigger: AGTTTGAGACCAGCTTGGGCAACTTGGTGAAATCCC...CCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000578780.2
ENST00000639487.1
ENST00000640769.2
CDS-3UTR CCA 90 bp GGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCATCCATTTACCACTGGTCGTaGCGGCACTTCCATCTGCTG +
Preference number: 4 (lower is better)
Translates to: GFNFSSPVDDCQLQGVASIYHWS*RHFHLL
Trigger: CAGCAGATGGAAGTGCCGCCACGACCAGTGGTAAAT...GGATGCTACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000640769.2
CDS-3UTR CCA 90 bp GCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGAGTCTGATTTACCACTaGTCGTGGCGGCACTTCCAT +
Preference number: 4 (lower is better)
Translates to: AQKVVSCYYFWRAATTGRSLIYH*SWRHFH
Trigger: ATGGAAGTGCCGCCACGACCAGTGGTAAATCAGACT...CCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255674.11
ENST00000640769.2
CDS-3UTR CCA 90 bp CATCCTGGTGACAGCAGCCCTAACTTCCCTGTGGGTTGCAGCCTGAACAATGGAGGAAGACTGAGCTGCTaGAATTGTAGTTCCAATGTG +
Preference number: 4 (lower is better)
Translates to: HPGDSSPNFPVGCSLNNGGRLSC*NCSSNV
Trigger: CACATTGGAACTACAATTCCAGCAGCTCAGTCTTCC...TCCATTGTTCAGGCTGCAACCCACAGGGAAGTTAGGGCTGCTGTCACCAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CCA 90 bp GGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGATGGAGACACAAAACTaGGGAAGACTGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GTESCQLLLLLESCHNWTMETQN*GRLSCW
Trigger: CCAGCAGCTCAGTCTTCCCCAGTTTTGTGTCTCCAT...CGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CCA 90 bp CATCCTGGTGACAGCAGCCCTAACTTCCCTGTGGGTTGCAGCCTGAACAATGGATTTCACTCGTGGCAATaGGTGAGACAACATATGGAG +
Preference number: 4 (lower is better)
Translates to: HPGDSSPNFPVGCSLNNGFHSWQ*VRQHME
Trigger: CTCCATATGTTGTCTCACCCATTGCCACGAGTGAAA...TCCATTGTTCAGGCTGCAACCCACAGGGAAGTTAGGGCTGCTGTCACCAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CCA 90 bp CGGCGCACCATACTACATTCTGACTGGTCCAGAAGAATGTTCACCACAGTTCCCCTCTGGAGAGAACTCTaGCGTCTATTAGAGGACGCT +
Preference number: 4 (lower is better)
Translates to: RRTILHSDWSRRMFTTVPLWREL*RLLEDA
Trigger: AGCGTCCTCTAATAGACGCCAGAGTTCTCTCCAGAG...GGGAACTGTGGTGAACATTCTTCTGGACCAGTCAGAATGTAGTATGGTGCGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CCA 90 bp ACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGCTCTGGAGAGAACTCTaGCGTCTATTAGAGGACGCT +
Preference number: 4 (lower is better)
Translates to: TSSGNSCYTQLASTLAPLLWREL*RLLEDA
Trigger: AGCGTCCTCTAATAGACGCCAGAGTTCTCTCCAGAG...CAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
CDS-3UTR CCA 90 bp ACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGCAGCCTGAACAATaGAATGGAGGCAGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: TSSGNSCYTQLASTLAPLLQPEQ*NGGSPA
Trigger: TGCAGGACTGCCTCCATTCCATTGTTCAGGCTGCAA...CAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000679113.1
CDS-3UTR CCA 90 bp CTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAGCCCGTTTCAAGGGTaGTCAGTGCTGATCCTAATC +
Preference number: 4 (lower is better)
Translates to: LPQLDGVGVSPVLSLMGKSPFQG*SVLILI
Trigger: GATTAGGATCAGCACTGACCACCCTTGAAACGGGCT...CTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp GCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAAGCCCGTTTCAAGGGTaGTCAGTGCTGATCCTAATC +
Preference number: 4 (lower is better)
Translates to: AATTGRCWSITSSLSHGKSPFQG*SVLILI
Trigger: GATTAGGATCAGCACTGACCACCCTTGAAACGGGCT...TTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp GGCCATAGAAATGAGGCGCATCCGTCACTTTCAGACACTGGAGCAGTTTCAGAGAGCCCGTTTCAAGGGTaGTCAGTGCTGATCCTAATC +
Preference number: 4 (lower is better)
Translates to: GHRNEAHPSLSDTGAVSESPFQG*SVLILI
Trigger: GATTAGGATCAGCACTGACCACCCTTGAAACGGGCT...CTCTGAAACTGCTCCAGTGTCTGAAAGTGACGGATGCGCCTCATTTCTATGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CCA 90 bp CATCCTGGTGACAGCAGCCCTAACTTCCCTGTGGGTTGCAGCCTGAACAATGGACTGACTTGTCCTAGATaGAGCCCTCCAAAACTTGAA +
Preference number: 4 (lower is better)
Translates to: HPGDSSPNFPVGCSLNNGLTCPR*SPPKLE
Trigger: TTCAAGTTTTGGAGGGCTCCATCTAGGACAAGTCAG...TCCATTGTTCAGGCTGCAACCCACAGGGAAGTTAGGGCTGCTGTCACCAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CCA 90 bp CTGTTTAGTGCGGTGTGCCAAGCCAAGGACTTCAAGGTAACCCCACATGGACCACCGTTGTTTCTGAGGTaGAGAGAGAACTTGGATCTC +
Preference number: 4 (lower is better)
Translates to: LFSAVCQAKDFKVTPHGPPLFLR*RENLDL
Trigger: GAGATCCAAGTTCTCTCTCCACCTCAGAAACAACGG...TGGTCCATGTGGGGTTACCTTGAAGTCCTTGGCTTGGCACACCGCACTAAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CCA 90 bp TTCTGGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCCTTTGCAGTGTCTCTaGGAGCAATCGTCAAGAGGT +
Preference number: 4 (lower is better)
Translates to: FWRAATTGRCWSITSSLSPLQCL*EQSSRG
Trigger: ACCTCTTGACGATTGCTCCCAGAGACACTGCAAAGG...AGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp ACAAACGGGAGTGTGATGGCACCAGCTTTCCTCAGGAGCATGGCCAGAAGATTACCTTTGCAGTGTCTCTaGGAGCAATCGTCAAGAGGT +
Preference number: 4 (lower is better)
Translates to: TNGSVMAPAFLRSMARRLPLQCL*EQSSRG
Trigger: ACCTCTTGACGATTGCTCCCAGAGACACTGCAAAGG...TAATCTTCTGGCCATGCTCCTGAGGAAAGCTGGTGCCATCACACTCCCGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CCA 90 bp GCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGAGGGCTCTGAGTTCCTaGACACATGTCTGTATGAGG +
Preference number: 4 (lower is better)
Translates to: AQKVVSCYYFWRAATTGRRALSS*THVCMR
Trigger: CCTCATACAGACATGTGTCCAGGAACTCAGAGCCCT...CCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp ATTGCAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGACAAGCCTGCACATGTTCTCCAGTGGCATCTaGGAAGCCAACTTTAGGATA +
Preference number: 4 (lower is better)
Translates to: IASWQYTGQDTWQTSLHMFSSGI*EANFRI
Trigger: TATCCTAAAGTTGGCTTCCCAGATGCCACTGGAGAA...CATGTGCAGGCTTGTCTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CCA 90 bp CCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGCCATCTGCTGAACCGTaGTGTTCTCCAGTGGCATCT +
Preference number: 4 (lower is better)
Translates to: PQLDGVGVSPVLSLMGKKPSAEP*CSPVAS
Trigger: AGATGCCACTGGAGAACACCACGGTTCAGCAGATGG...CTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp AGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAGCTGCTATTACTTCTaGAGAGCTGCCACAACTGGA +
Preference number: 4 (lower is better)
Translates to: RAATTGRCWSITSSLSHGSCYYF*RAATTG
Trigger: TCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCT...CCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp TCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGCCTCCTTTCTCCTTCTaGGGACACATTCCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: SSGNSCYTQLASTLAPLLPPFSF*GHIPLS
Trigger: AGAGAGGGGAATGTGTCCCCAGAAGGAGAAAGGAGG...CAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578780.2
CDS-3UTR TCA 90 bp CACATGTGCAGAACATATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGTTTGACAATTCAGTTTaGTTGGTTTGGTATGAGGCA +
Preference number: 4 (lower is better)
Translates to: HMCRTYQSPLSSAWPGPRFDNSV*LVWYEA
Trigger: TGCCTCATACCAAACCAATCAAACTGAATTGTCAAA...CCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGATATGTTCTGCACATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581161.5
CDS-3UTR TCA 90 bp GAAAGGAATTGCAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGACAAGCCTACAGGTGCATTCAATTaGATAAACGGCCTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: ERNCKLAVYRAGHVADKPTGAFN*INGLCS
Trigger: ACTGCAGAGGCCGTTTATTCAATTGAATGCACCTGT...AGGCTTGTCTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAATTCCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR TCA 90 bp TCTGTTTCTTCTCGTGCCTGTGACTCTGTCAGAACCAAGAGGTCTAACAGTGGGACTCGTGGCAATGGGTaGGACAACATATGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: SVSSRACDSVRTKRSNSGTRGNG*DNIWRS
Trigger: GCTTCTCCATATGTTGTCTCACCCATTGCCACGAGT...CCCACTGTTAGACCTCTTGGTTCTGACAGAGTCACAGGCACGAGAAGAAACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp ATTGCAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGACAAGCCTGCACATGAATTCCATTGCAAAGTaGAGACACGGGTTTAGTGAC +
Preference number: 4 (lower is better)
Translates to: IASWQYTGQDTWQTSLHMNSIAK*RHGFSD
Trigger: GTCACTAAACCCGTGTCTTCACTTTGCAATGGAATT...CATGTGCAGGCTTGTCTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR TCA 90 bp CACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGTCCTTCCTCAAGAGTGTaGGGCATGGTTGTACCAAAC +
Preference number: 4 (lower is better)
Translates to: HRKLSAAITSGELPQLDGPSSRV*GMVVPN
Trigger: GTTTGGTACAACCATGCCTCACACTCTTGAGGAAGG...ACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
CDS-3UTR TCA 90 bp CCATCAAAATCCAAGGCCAGAGAGAGTGCAAGACAGGGACAAGGTGAGCTTCAACCTTCCTCAAGAGTGTaGGGCATGGTTGTACCAAAC +
Preference number: 4 (lower is better)
Translates to: PSKSKARESARQGQGELQPSSRV*GMVVPN
Trigger: GTTTGGTACAACCATGCCTCACACTCTTGAGGAAGG...TTGAAGCTCACCTTGTCCCTGTCTTGCACTCTCTCTGGCCTTGGATTTTGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR TCA 90 bp TCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGCCTTCCTCAAGAGTGTaGGGCATGGTTGTACCAAAC +
Preference number: 4 (lower is better)
Translates to: SSGNSCYTQLASTLAPLLPSSRV*GMVVPN
Trigger: GTTTGGTACAACCATGCCTCACACTCTTGAGGAAGG...CAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
CDS-3UTR TCA 90 bp TCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGCGGAAACAGGCAAACTaGAGACCGATGGCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: SGNSCYTQLASTLAPLLMRKQAN*RPMAKK
Trigger: CTTCTTTGCCATCGGTCTTCAGTTTGCCTGTTTCCG...CATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp AGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCTATTCTCAGCATATCTaGCACCGGCTTCAAGGCCAA +
Preference number: 4 (lower is better)
Translates to: STSSGNSCYTQLASTLAPYSQHI*HRLQGQ
Trigger: TTGGCCTTGAAGCCGGTGTCAGATATGCTGAGAATA...GGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000679113.1
CDS-3UTR TCA 90 bp AGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGACTCCCATGATACCATaGCAGGTTCCAAGCTATTCT +
Preference number: 4 (lower is better)
Translates to: RAATTGRCWSITSSLSHGTPMIP*QVPSYS
Trigger: AGAATAGCTTGGAACCTGTCATGGTATCATGGGAGT...CCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000679113.1
CDS-3UTR TCA 90 bp AAAAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGCTGTGGGTTGCAGCCTaGACAATGGAATGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: KRHRKLSAAITSGELPQLLWVAA*TMEWRQ
Trigger: CTGCCTCCATTCCATTGTTCAGGCTGCAACCCACAG...CAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
ENST00000679113.1
CDS-3UTR TCA 90 bp ACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTCTGAAGTTGTTGCCTaGCAGCAGTCCGGATATCAT +
Preference number: 4 (lower is better)
Translates to: TSSGNSCYTQLASTLAPLSEVVA*QQSGYH
Trigger: ATGATATCCGGACTGCTGTCAGGCAACAACTTCAGA...CAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GCAGGCCATAGAAATGAGGCGCATCCGTCACTTTCAGACACTGGAGCAGTTTCATCTGAAGTTGTTGCCTaGCAGCAGTCCGGATATCAT +
Preference number: 4 (lower is better)
Translates to: AGHRNEAHPSLSDTGAVSSEVVA*QQSGYH
Trigger: ATGATATCCGGACTGCTGTCAGGCAACAACTTCAGA...TGAAACTGCTCCAGTGTCTGAAAGTGACGGATGCGCCTCATTTCTATGGCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp AGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCGACCTCAAGGAGACCTaGCAAGTACTTCACACAGAT +
Preference number: 4 (lower is better)
Translates to: STSSGNSCYTQLASTLAPDLKET*QVLHTD
Trigger: ATCTGTGTGAAGTACTTGTCAGGTCTCCTTGAGGTC...GGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp AGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAAGGCAAGAACCAAAGTaGCATCCACTCCAAGCTCCC +
Preference number: 4 (lower is better)
Translates to: RGSTSSGNSCYTQLASTLRQEPK*HPLQAP
Trigger: GGGAGCTTGGAGTGGATGTCACTTTGGTTCTTGCCT...TAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp CACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGGCCACCGGAAATGTTCTaGCAACTGTTTGCTAAGGCC +
Preference number: 4 (lower is better)
Translates to: HNWTVLEYHQFSLSWERRPPEMF*QLFAKA
Trigger: GGCCTTAGCAAACAGTTGTCAGAACATTTCCGGTGG...CCTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp TGGGAAAGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACAGGGCAGGTTTTCCAATaGGCGATAGGCCAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: WERRGSTLCREVARLQVTGQVFQ*AIGQSP
Trigger: AGGACTCTGGCCTATCGCTCATTGGAAAACCTGCCC...TGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCTTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp CAAGGTCAGGCTCCACCAATAAACATGACTGCAGAAGCCTGGACAAAGAGGATACTTGGATCTCGATCCTaGCTTGTCCTAGATGGAGCC +
Preference number: 4 (lower is better)
Translates to: QGQAPPINMTAEAWTKRILGSRS*LVLDGA
Trigger: GGCTCCATCTAGGACAAGTCAGGATCGAGATCCAAG...TATCCTCTTTGTCCAGGCTTCTGCAGTCATGTTTATTGGTGGAGCCTGACCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp AGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTCTTGGATCTCGATCCTaGCTTGTCCTAGATGGAGCC +
Preference number: 4 (lower is better)
Translates to: RRGSTLCREVARLQVTAALGSRS*LVLDGA
Trigger: GGCTCCATCTAGGACAAGTCAGGATCGAGATCCAAG...AGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GACTTCAAGGTAACCCCACATGGACCAGGGCAACCCTTTAAAGACAATCTGTCATGCCACCGTTGTTTCTaGGGTGGAGAGAGAACTTGG +
Preference number: 4 (lower is better)
Translates to: DFKVTPHGPGQPFKDNLSCHRCF*GGERTW
Trigger: CCAAGTTCTCTCTCCACCTCAGAAACAACGGTGGCA...TGACAGATTGTCTTTAAAGGGTTGCCCTGGTCCATGTGGGGTTACCTTGAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp TCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGTTCAGTACTCCCCAATaGAGGTGCCACCGTTGTTTC +
Preference number: 4 (lower is better)
Translates to: SGNSCYTQLASTLAPLLMFSTPQ*RCHRCF
Trigger: GAAACAACGGTGGCACCTTCATTGGGGAGTACTGAA...CATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp CCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGTTCAGTACTCCCCAATaGAGGTGCCACCGTTGTTTC +
Preference number: 4 (lower is better)
Translates to: PQLDGVGVSPVLSLMGKKFSTPQ*RCHRCF
Trigger: GAAACAACGGTGGCACCTTCATTGGGGAGTACTGAA...CTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCATTCAGTACTCCCCAATaGAGGTGCCACCGTTGTTTC +
Preference number: 4 (lower is better)
Translates to: AGFNFSSPVDDCQLQGVAFSTPQ*RCHRCF
Trigger: GAAACAACGGTGGCACCTTCATTGGGGAGTACTGAA...TGCTACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp TCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGTTCAGTACTCCCCAATaGAGGTGCCACCGTTGTTTC +
Preference number: 4 (lower is better)
Translates to: SSGNSCYTQLASTLAPLLFSTPQ*RCHRCF
Trigger: GAAACAACGGTGGCACCTTCATTGGGGAGTACTGAA...CAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGACTGCACAAGTGGCTaGAATTCAGTACTCCCCAAT +
Preference number: 4 (lower is better)
Translates to: AATTGRCWSITSSLSHGKDCTSG*NSVLPN
Trigger: ATTGGGGAGTACTGAATTTCAGCCACTTGTGCAGTC...TTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp ACAAACGGGAGTGTGATGGCACCAGCTTTCCTCAGGAGCATGGCCAGAAGATTAGAAAGAGATGAATCATaGGGTGGCCGTGGTGATGTA +
Preference number: 4 (lower is better)
Translates to: TNGSVMAPAFLRSMARRLERDES*GGRGDV
Trigger: TACATCACCACGGCCACCTCATGATTCATCTCTTTC...TAATCTTCTGGCCATGCTCCTGAGGAAAGCTGGTGCCATCACACTCCCGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp GCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAGGCTGCACATTGCTaGAAGAAGAGATGGAGTAAC +
Preference number: 4 (lower is better)
Translates to: AATTGRCWSITSSLSHGKEAAHC*KKRWSN
Trigger: GTTACTCCATCTCTTCTTTCAGCAATGTGCAGCCTC...TTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp TCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGTTCACAAGCTCATCCTaGATCACAAGGTCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: SGNSCYTQLASTLAPLLMFTSSS*ITRSGS
Trigger: GGAGCCTGACCTTGTGATTCAGGATGAGCTTGTGAA...CATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp CATCCTGAATCACAAGGTCAGGCTCCACCAATAAACATGACTGCAGAAGCCTGGTTCACAAGCTCATCCTaGATCACAAGGTCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: HPESQGQAPPINMTAEAWFTSSS*ITRSGS
Trigger: GGAGCCTGACCTTGTGATTCAGGATGAGCTTGTGAA...CCAGGCTTCTGCAGTCATGTTTATTGGTGGAGCCTGACCTTGTGATTCAGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp TACTCCCCAATGAAGGTGCCACCGTTGTTTCTGAGGTGGAGAGAGAACTTGGATTTCACAAGCTCATCCTaGATCACAAGGTCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: YSPMKVPPLFLRWRENLDFTSSS*ITRSGS
Trigger: GGAGCCTGACCTTGTGATTCAGGATGAGCTTGTGAA...ATCCAAGTTCTCTCTCCACCTCAGAAACAACGGTGGCACCTTCATTGGGGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp GCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCATTCACAAGCTCATCCTaGATCACAAGGTCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: AGFNFSSPVDDCQLQGVAFTSSS*ITRSGS
Trigger: GGAGCCTGACCTTGTGATTCAGGATGAGCTTGTGAA...TGCTACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp AGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAGAGTCATCAAGAAGTaGAGCCACTGTTGGACTACA +
Preference number: 4 (lower is better)
Translates to: RAATTGRCWSITSSLSHGRVIKK*SHCWTT
Trigger: TGTAGTCCAACAGTGGCTTCACTTCTTGATGACTCT...CCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp CCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGACTGACAGCCAGCAGTaGCATCAATGCATTTGCAGC +
Preference number: 4 (lower is better)
Translates to: PQLDGVGVSPVLSLMGKKTDSQQ*HQCICS
Trigger: GCTGCAAATGCATTGATGTCACTGCTGGCTGTCAGT...CTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp TGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAATCTGTGCTCTTCTACTaGCAGCCAGCAGTGACATCA +
Preference number: 4 (lower is better)
Translates to: CREVARLQVTAATHSWLQSVLFY*QPAVTS
Trigger: TGATGTCACTGCTGGCTGTCAGTAGAAGAGCACAGA...TTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp AAGCATAAAAACCATCTGCTGAACCGTGGTGTTCTCCAGTGGCATCTGGGAAGCTCTGTGCTCTTCTACTaGCAGCCAGCAGTGACATCA +
Preference number: 4 (lower is better)
Translates to: KHKNHLLNRGVLQWHLGSSVLFY*QPAVTS
Trigger: TGATGTCACTGCTGGCTGTCAGTAGAAGAGCACAGA...GCTTCCCAGATGCCACTGGAGAACACCACGGTTCAGCAGATGGTTTTTATGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR TCA 90 bp TGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAAAAGACAGGGACAAGGTaGGCTTCAAGAGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: CREVARLQVTAATHSWLQKTGTR*ASRAAS
Trigger: AGAAGCAGCTCTTGAAGCTCACCTTGTCCCTGTCTT...TTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp CTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGCCTCTATGTGTAGCTTaGACAGGGTGTTGTCCACAA +
Preference number: 4 (lower is better)
Translates to: LPQLDGVGVSPVLSLMGKPLCVA*TGCCPQ
Trigger: TTGTGGACAACACCCTGTTCAAGCTACACATAGAGG...CTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp ACAAACGGGAGTGTGATGGCACCAGCTTTCCTCAGGAGCATGGCCAGAAGATTACCTCTATGTGTAGCTTaGACAGGGTGTTGTCCACAA +
Preference number: 4 (lower is better)
Translates to: TNGSVMAPAFLRSMARRLPLCVA*TGCCPQ
Trigger: TTGTGGACAACACCCTGTTCAAGCTACACATAGAGG...TAATCTTCTGGCCATGCTCCTGAGGAAAGCTGGTGCCATCACACTCCCGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR TCA 90 bp ACTGGTCCAGAAGAATGTTCACCACAGTTCCCCAGAGCCCACCGGAAATGTTCTGATAAACCAGTCAAATaGGATGTCCCGCTAGGTCAC +
Preference number: 4 (lower is better)
Translates to: TGPEECSPQFPRAHRKCSDKPVK*DVPLGH
Trigger: GTGACCTAGCGGGACATCTCATTTGACTGGTTTATC...AGAACATTTCCGGTGGGCTCTGGGGAACTGTGGTGAACATTCTTCTGGACCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638251.1
CDS-3UTR GCA 90 bp TCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGTGTAATGCCAGGCGATaGTTTCCATCTCCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: SGNSCYTQLASTLAPLLMCNARR*FPSPKA
Trigger: GGCCTTTGGAGATGGAAAGCATCGCCTGGCATTACA...CATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR GCA 90 bp ACAGAATGGCCTTGGCAGCAGTGTTCACCTGCTCAACAACACAGACCCGATAAATGTAATGCCAGGCGATaGTTTCCATCTCCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: TEWPWQQCSPAQQHRPDKCNARR*FPSPKA
Trigger: GGCCTTTGGAGATGGAAAGCATCGCCTGGCATTACA...TTTATCGGGTCTGTGTTGTTGAGCAGGTGAACACTGCTGCCAAGGCCATTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638251.1
CDS-3UTR GCA 90 bp GGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGTGTTTCTTAAATACATaGACAGCTGCTGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: GELPQLDGVGVSPVLSLMCFLNT*TAAAGR
Trigger: CCTGCCTGCAGCAGCTGTGCATGTATTTAAGAAACA...CATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR GCA 90 bp AGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGCTTGTTCCAGGTCAATaGTGTCATCATCAATCGTCC +
Preference number: 4 (lower is better)
Translates to: RAATTGRCWSITSSLSHGLVPGQ*CHHQSS
Trigger: GGACGATTGATGATGACAGCATTGACCTGGAACAAG...CCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR GCA 90 bp GGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGAAAAGAGAAGACTGTTaGGAGAGCGAAACACGCATG +
Preference number: 4 (lower is better)
Translates to: GELPQLDGVGVSPVLSLMKREDC*ESETRM
Trigger: CATGCGTGTTTCGCTCTCGCAACAGTCTTCTCTTTT...CATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
CDS-3UTR GCA 90 bp TCTCTGGGAGCAATCGTCAAGAGGTTGTCCAAGAGGCTGCACATTGCTGAAAGACTGTTTAGTGCGGTGTaGCAAGCCAAGGACTTCAAG +
Preference number: 4 (lower is better)
Translates to: SLGAIVKRLSKRLHIAERLFSAV*QAKDFK
Trigger: CTTGAAGTCCTTGGCTTGGCACACCGCACTAAACAG...TCTTTCAGCAATGTGCAGCCTCTTGGACAACCTCTTGACGATTGCTCCCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR GCA 90 bp AGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCGGTTGTCCAAGAGGCTaGACATTGCTGAAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: SCYTQLASTLAPLLMTVSGCPRG*TLLKEE
Trigger: CTCTTCTTTCAGCAATGTGCAGCCTCTTGGACAACC...GCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp GCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGGGTTGTCCAAGAGGCTaGACATTGCTGAAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: AQKVVSCYYFWRAATTGRGCPRG*TLLKEE
Trigger: CTCTTCTTTCAGCAATGTGCAGCCTCTTGGACAACC...CCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp ATTGCAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGACAAGCCTGCACATGACCAATAAACATGACTaGAGAAGCCTGGACAAAGAG +
Preference number: 4 (lower is better)
Translates to: IASWQYTGQDTWQTSLHMTNKHD*RSLDKE
Trigger: CTCTTTGTCCAGGCTTCTGCAGTCATGTTTATTGGT...CATGTGCAGGCTTGTCTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp GGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGACAAGCCTGCACATGTaGAGAACATATCAATCGCCG +
Preference number: 4 (lower is better)
Translates to: GTESCQLLLLLESCHNWTTSLHM*RTYQSP
Trigger: CGGCGATTGATATGTTCTGCACATGTGCAGGCTTGT...CGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp CACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGGCGTGGCAGACAAGCCTaGACATGTGCAGAACATATC +
Preference number: 4 (lower is better)
Translates to: HNWTVLEYHQFSLSWERRRGRQA*TCAEHI
Trigger: GATATGTTCTGCACATGTGCAGGCTTGTCTGCCACG...CCTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGCGTGGCAGACAAGCCTaGACATGTGCAGAACATATC +
Preference number: 4 (lower is better)
Translates to: SGNSCYTQLASTLAPLLMRGRQA*TCAEHI
Trigger: GATATGTTCTGCACATGTGCAGGCTTGTCTGCCACG...CATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TGGTGTTCTCCAGTGGCATCTGGGAAGCCAACTTTAGGATACACAGCATCAGAGCGTGGCAGACAAGCCTaGACATGTGCAGAACATATC +
Preference number: 4 (lower is better)
Translates to: WCSPVASGKPTLGYTASERGRQA*TCAEHI
Trigger: GATATGTTCTGCACATGTGCAGGCTTGTCTGCCACG...CTCTGATGCTGTGTATCCTAAAGTTGGCTTCCCAGATGCCACTGGAGAACACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACGTGGCAGACAAGCCTaGACATGTGCAGAACATATC +
Preference number: 4 (lower is better)
Translates to: CREVARLQVTAATHSWLQRGRQA*TCAEHI
Trigger: GATATGTTCTGCACATGTGCAGGCTTGTCTGCCACG...TTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp GGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGCTGGAGATGCCCTTTTaGTTCTTCGGTCAAGAGAAC +
Preference number: 4 (lower is better)
Translates to: GTESCQLLLLLESCHNWTLEMPF*FFGQEN
Trigger: GTTCTCTTGACCGAAGAAGCAAAAGGGCATCTCCAG...CGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp AGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCCTGGAGATGCCCTTTTaGTTCTTCGGTCAAGAGAAC +
Preference number: 4 (lower is better)
Translates to: SCYTQLASTLAPLLMTVSLEMPF*FFGQEN
Trigger: GTTCTCTTGACCGAAGAAGCAAAAGGGCATCTCCAG...GCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACAGCATCAGAGAGTTaGTCACGGCTCCTCTATGTG +
Preference number: 4 (lower is better)
Translates to: SGNSCYTQLASTLAPLLMTASES*SRLLYV
Trigger: CACATAGAGGAGCCGTGAGCAACTCTCTGATGCTGT...CATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp CTGTTTAGTGCGGTGTGCCAAGCCAAGGACTTCAAGGTAACCCCACATGGACCAGAGGCAATAAAGGGCTaGTCTTGTGCTTGTATTTGC +
Preference number: 4 (lower is better)
Translates to: LFSAVCQAKDFKVTPHGPEAIKG*SCACIC
Trigger: GCAAATACAAGCACAAGAGCAGCCCTTTATTGCCTC...TGGTCCATGTGGGGTTACCTTGAAGTCCTTGGCTTGGCACACCGCACTAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR GCA 90 bp GCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGTCTTCAGGTAACAGCTaGTACACACAGCTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: AQKVVSCYYFWRAATTGRSSGNS*YTQLAS
Trigger: TGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGA...CCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp GCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAATCTTCAGGTAACAGCTaGTACACACAGCTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: AATTGRCWSITSSLSHGKSSGNS*YTQLAS
Trigger: TGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGA...TTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp AGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCTCTTCAGGTAACAGCTaGTACACACAGCTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: STSSGNSCYTQLASTLAPSSGNS*YTQLAS
Trigger: TGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGA...GGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp ACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTCTTCAGGTAACAGCTaGTACACACAGCTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: TSSGNSCYTQLASTLAPLSSGNS*YTQLAS
Trigger: TGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGA...CAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAATTACTTCTGGAGAGCTaGCACAACTGGACGGTGTTG +
Preference number: 4 (lower is better)
Translates to: CREVARLQVTAATHSWLQLLLES*HNWTVL
Trigger: CAACACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAA...TTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp GCACATGTGCAGAACATATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGTCCCAGAACTTTCTATaGCTTTTCAACAGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: AHVQNISIAAVQCLARATSQNFL*LFNRKE
Trigger: TTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGA...CGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGATATGTTCTGCACATGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp AGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCGGGATTTCACCAAGTTaGCCAAGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: SCYTQLASTLAPLLMTVSGISPS*PSWSQT
Trigger: AGTTTGAGACCAGCTTGGGCAACTTGGTGAAATCCC...GCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578780.2
ENST00000639487.1
ENST00000640769.2
CDS-3UTR CCA 90 bp TTCTGGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTTTCAGCCTGCAGATTTaGCTCCACATTAGACCGAAG +
Preference number: 4 (lower is better)
Translates to: FWRAATTGRCWSITSSLSFSLQI*LHIRPK
Trigger: CTTCGGTCTAATGTGGAGCCAAATCTGCAGGCTGAA...AGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255674.11
ENST00000640769.2
CDS-3UTR CCA 90 bp ACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAATTTACCACTGGTCGTaGCGGCACTTCCATCTGCTG +
Preference number: 4 (lower is better)
Translates to: TAGFNFSSPVDDCQLQGVIYHWS*RHFHLL
Trigger: CAGCAGATGGAAGTGCCGCCACGACCAGTGGTAAAT...TACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000640769.2
CDS-3UTR CCA 90 bp AAGCATAAAAACCATCTGCTGAACCGTGGTGTTCTCCAGTGGCATCTGGGAAGCAGTCTGATTTACCACTaGTCGTGGCGGCACTTCCAT +
Preference number: 4 (lower is better)
Translates to: KHKNHLLNRGVLQWHLGSSLIYH*SWRHFH
Trigger: ATGGAAGTGCCGCCACGACCAGTGGTAAATCAGACT...GCTTCCCAGATGCCACTGGAGAACACCACGGTTCAGCAGATGGTTTTTATGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581161.5
CDS-3UTR CCA 90 bp AGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTACATGTCTGTCTGTGGTaGTCAGGGGTAGCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: RGSTSSGNSCYTQLASTLHVCLW*SGVAKE
Trigger: TTCCTTGGCTACCCCTGACCACCACAGACAGACATG...TAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000640769.2
CDS-3UTR CCA 90 bp CGTTTTAGTTTCAGAGTTCATTTGCTTCAACAGATTATCACTCCCATGATACCACCTGGCCATCTCCTCTaGGTCGCTGGCCTGTGCGCC +
Preference number: 4 (lower is better)
Translates to: RFSFRVHLLQQIITPMIPPGHLL*VAGLCA
Trigger: GGCGCACAGGCCAGCGACCCAGAGGAGATGGCCAGG...TGGTATCATGGGAGTGATAATCTGTTGAAGCAAATGAACTCTGAAACTAAAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CCA 90 bp AGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGTTCAGTTTCCAGCTCTaGCAGATCTATGTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: RAATTGRCWSITSSLSHGFSFQL*QIYVSH
Trigger: ATGGGACACATAGATCTGCCAGAGCTGGAAACTGAA...CCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CCA 90 bp GGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAGACTGAGCTGCTaGAATTGTAGTTCCAATGTG +
Preference number: 4 (lower is better)
Translates to: GELPQLDGVGVSPVLSLMGRLSC*NCSSNV
Trigger: CACATTGGAACTACAATTCCAGCAGCTCAGTCTTCC...CATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CCA 90 bp AGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGATAAAGGCCATTCTGTaGTGCACAAGCATCACCTCT +
Preference number: 4 (lower is better)
Translates to: RAATTGRCWSITSSLSHGIKAIL*CTSITS
Trigger: AGAGGTGATGCTTGTGCACCACAGAATGGCCTTTAT...CCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CCA 90 bp TGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGCTACGCAAGGCTTaGTCTGCCAGCTCCACTAAT +
Preference number: 4 (lower is better)
Translates to: CYTQLASTLAPLLMTVSFKLRKA*SASSTN
Trigger: ATTAGTGGAGCTGGCAGACCAAGCCTTGCGTAGCTT...GAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CCA 90 bp GGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGCTTGTAGTAATGGACTaGCCTGAGCAGATTTCCAGA +
Preference number: 4 (lower is better)
Translates to: GELPQLDGVGVSPVLSLMLVVMD*PEQISR
Trigger: TCTGGAAATCTGCTCAGGCCAGTCCATTACTACAAG...CATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CCA 90 bp AGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGTTTCACTCGTGGCAATaGGTGAGACAACATATGGAG +
Preference number: 4 (lower is better)
Translates to: RAATTGRCWSITSSLSHGFHSWQ*VRQHME
Trigger: CTCCATATGTTGTCTCACCCATTGCCACGAGTGAAA...CCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CCA 90 bp CCGTGGTGTTCTCCAGTGGCATCTGGGAAGCCAACTTTAGGATACACAGCATCAATAACAGAATGGCCTTaGCAGCAGTGTTCACCTCAC +
Preference number: 4 (lower is better)
Translates to: PWCSPVASGKPTLGYTASITEWP*QQCSPH
Trigger: GTGAGGTGAACACTGCTGCCAAGGCCATTCTGTTAT...TGATGCTGTGTATCCTAAAGTTGGCTTCCCAGATGCCACTGGAGAACACCACGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CCA 90 bp AGAGAACAGAAAGGAATTGCAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGGCAGGTATAACAGAATaGCCTTGGCAGCAGTGTTCA +
Preference number: 4 (lower is better)
Translates to: REQKGIASWQYTGQDTWQAGITE*PWQQCS
Trigger: TGAACACTGCTGCCAAGGCCATTCTGTTATACCTGC...CTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAATTCCTTTCTGTTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CCA 90 bp CACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGGCTCTGGAGAGAACTCTaGCGTCTATTAGAGGACGCT +
Preference number: 4 (lower is better)
Translates to: HNWTVLEYHQFSLSWERRLWREL*RLLEDA
Trigger: AGCGTCCTCTAATAGACGCCAGAGTTCTCTCCAGAG...CCTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
CDS-3UTR CCA 90 bp CAAGGTGTAGCATCCCATGGCACTCAGGAAGAATTAAGGAGCTGCACGAGGTTTCTCTGGAGAGAACTCTaGCGTCTATTAGAGGACGCT +
Preference number: 4 (lower is better)
Translates to: QGVASHGTQEELRSCTRFLWREL*RLLEDA
Trigger: AGCGTCCTCTAATAGACGCCAGAGTTCTCTCCAGAG...AAACCTCGTGCAGCTCCTTAATTCTTCCTGAGTGCCATGGGATGCTACACCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CCA 90 bp TGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCTTGCAGCCTGAACAATaGAATGGAGGCAGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: CYTQLASTLAPLLMTVSFLQPEQ*NGGSPA
Trigger: TGCAGGACTGCCTCCATTCCATTGTTCAGGCTGCAA...GAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000679113.1
CDS-3UTR CCA 90 bp TGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAATTGCAGCCTGAACAATaGAATGGAGGCAGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: CREVARLQVTAATHSWLQLQPEQ*NGGSPA
Trigger: TGCAGGACTGCCTCCATTCCATTGTTCAGGCTGCAA...TTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000679113.1
CDS-3UTR CCA 90 bp TGGTGTTCTCCAGTGGCATCTGGGAAGCCAACTTTAGGATACACAGCATCAGAGAGCCCGTTTCAAGGGTaGTCAGTGCTGATCCTAATC +
Preference number: 4 (lower is better)
Translates to: WCSPVASGKPTLGYTASESPFQG*SVLILI
Trigger: GATTAGGATCAGCACTGACCACCCTTGAAACGGGCT...CTCTGATGCTGTGTATCCTAAAGTTGGCTTCCCAGATGCCACTGGAGAACACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CCA 90 bp CTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGCCGTTGTTTCTGAGGTaGAGAGAGAACTTGGATCTC +
Preference number: 4 (lower is better)
Translates to: LPQLDGVGVSPVLSLMGKPLFLR*RENLDL
Trigger: GAGATCCAAGTTCTCTCTCCACCTCAGAAACAACGG...CTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp TTCTGGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCCGTTGTTTCTGAGGTaGAGAGAGAACTTGGATCTC +
Preference number: 4 (lower is better)
Translates to: FWRAATTGRCWSITSSLSPLFLR*RENLDL
Trigger: GAGATCCAAGTTCTCTCTCCACCTCAGAAACAACGG...AGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp CACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGTCCTTTGCAGTGTCTCTaGGAGCAATCGTCAAGAGGT +
Preference number: 4 (lower is better)
Translates to: HRKLSAAITSGELPQLDGPLQCL*EQSSRG
Trigger: ACCTCTTGACGATTGCTCCCAGAGACACTGCAAAGG...ACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp TCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGAGGGCTCTGAGTTCCTaGACACATGTCTGTATGAGG +
Preference number: 4 (lower is better)
Translates to: SGNSCYTQLASTLAPLLMRALSS*THVCMR
Trigger: CCTCATACAGACATGTGTCCAGGAACTCAGAGCCCT...CATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp CCATCAAAATCCAAGGCCAGAGAGAGTGCAAGACAGGGACAAGGTGAGCTTCAAAGGGCTCTGAGTTCCTaGACACATGTCTGTATGAGG +
Preference number: 4 (lower is better)
Translates to: PSKSKARESARQGQGELQRALSS*THVCMR
Trigger: CCTCATACAGACATGTGTCCAGGAACTCAGAGCCCT...TTGAAGCTCACCTTGTCCCTGTCTTGCACTCTCTCTGGCCTTGGATTTTGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CCA 90 bp CATCCTGAATCACAAGGTCAGGCTCCACCAATAAACATGACTGCAGAAGCCTGGAGGGCTCTGAGTTCCTaGACACATGTCTGTATGAGG +
Preference number: 4 (lower is better)
Translates to: HPESQGQAPPINMTAEAWRALSS*THVCMR
Trigger: CCTCATACAGACATGTGTCCAGGAACTCAGAGCCCT...CCAGGCTTCTGCAGTCATGTTTATTGGTGGAGCCTGACCTTGTGATTCAGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CCA 90 bp CCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGAGGGCTCTGAGTTCCTaGACACATGTCTGTATGAGG +
Preference number: 4 (lower is better)
Translates to: PQLDGVGVSPVLSLMGKKRALSS*THVCMR
Trigger: CCTCATACAGACATGTGTCCAGGAACTCAGAGCCCT...CTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp CTTTCCAGACAGGCAGCAAGCACAGTAATGACTTTTTCATTAGCCAGGATCTTGACAGGGCAGGACACGTaGCAGACAAGCCTGCACATG +
Preference number: 4 (lower is better)
Translates to: LSRQAASTVMTFSLARILTGQDT*QTSLHM
Trigger: CATGTGCAGGCTTGTCTGCCACGTGTCCTGCCCTGT...CAAGATCCTGGCTAATGAAAAAGTCATTACTGTGCTTGCTGCCTGTCTGGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CCA 90 bp AAGCTGTTTTTGCCTTCTGATAATTGTAAATCAGAGCCCAAAGGGCAGCTGCTCACAGGGCAGGACACGTaGCAGACAAGCCTGCACATG +
Preference number: 4 (lower is better)
Translates to: KLFLPSDNCKSEPKGQLLTGQDT*QTSLHM
Trigger: CATGTGCAGGCTTGTCTGCCACGTGTCCTGCCCTGT...GAGCAGCTGCCCTTTGGGCTCTGATTTACAATTATCAGAAGGCAAAAACAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CCA 90 bp AGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTACCATCTGCTGAACCGTaGTGTTCTCCAGTGGCATCT +
Preference number: 4 (lower is better)
Translates to: RGSTSSGNSCYTQLASTLPSAEP*CSPVAS
Trigger: AGATGCCACTGGAGAACACCACGGTTCAGCAGATGG...TAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp GACAGGTTCCAAGCTATTCTCAGCATATCTGACACCGGCTTCAAGGCCAAACAACCATCTGCTGAACCGTaGTGTTCTCCAGTGGCATCT +
Preference number: 4 (lower is better)
Translates to: DRFQAILSISDTGFKAKQPSAEP*CSPVAS
Trigger: AGATGCCACTGGAGAACACCACGGTTCAGCAGATGG...TTGTTTGGCCTTGAAGCCGGTGTCAGATATGCTGAGAATAGCTTGGAACCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CCA 90 bp AAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACCATCTGCTGAACCGTaGTGTTCTCCAGTGGCATCT +
Preference number: 4 (lower is better)
Translates to: KAQKVVSCYYFWRAATTGPSAEP*CSPVAS
Trigger: AGATGCCACTGGAGAACACCACGGTTCAGCAGATGG...TCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp GCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGACAACTGGACGGTGTTaGAGTATCACCAGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: AQKVVSCYYFWRAATTGRTTGRC*SITSSL
Trigger: GAGAGAACTGGTGATACTCCAACACCGTCCAGTTGT...CCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp AGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCACAACTGGACGGTGTTaGAGTATCACCAGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: SCYTQLASTLAPLLMTVSTTGRC*SITSSL
Trigger: GAGAGAACTGGTGATACTCCAACACCGTCCAGTTGT...GCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp AGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCACAACTGGACGGTGTTaGAGTATCACCAGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: STSSGNSCYTQLASTLAPTTGRC*SITSSL
Trigger: GAGAGAACTGGTGATACTCCAACACCGTCCAGTTGT...GGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp ACAAACGGGAGTGTGATGGCACCAGCTTTCCTCAGGAGCATGGCCAGAAGATTAACAACTGGACGGTGTTaGAGTATCACCAGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: TNGSVMAPAFLRSMARRLTTGRC*SITSSL
Trigger: GAGAGAACTGGTGATACTCCAACACCGTCCAGTTGT...TAATCTTCTGGCCATGCTCCTGAGGAAAGCTGGTGCCATCACACTCCCGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CCA 90 bp AGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGAGAGCTGCCACAACTaGACGGTGTTGGAGTATCAC +
Preference number: 4 (lower is better)
Translates to: RGSTSSGNSCYTQLASTLESCHN*TVLEYH
Trigger: GTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTC...TAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp ATTGCAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGACAAGCCTGCACATGGAAACCTGCATAGGTTaGAATCTATGTCAGAGACCT +
Preference number: 4 (lower is better)
Translates to: IASWQYTGQDTWQTSLHMETCIG*NLCQRP
Trigger: AGGTCTCTGACATAGATTCCAACCTATGCAGGTTTC...CATGTGCAGGCTTGTCTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679113.1
3UTR CAA 72 bp GGAAACCTGCATAGGTTGGAATCTATGTCAGAGACCTaGGACAAGTCACTCATCTCTCTGGGCCTCAGGCAT +
Preference number: 4 (lower is better)
Translates to: GNLHRLESMSET*DKSLISLGLRH
Trigger: ATGCCTGAGGCCCAGAGAGATGAGTGACTTGTCCAAGGTCTCTGACATAGATTCCAACCTATGCAGGTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679113.1
CDS-3UTR TCA 90 bp GGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCATCCGTTGCCTCTCCTGAATaGGATCAGCGTAGCAGATTA +
Preference number: 4 (lower is better)
Translates to: GFNFSSPVDDCQLQGVASVASPE*DQRSRL
Trigger: TAATCTGCTACGCTGATCTCATTCAGGAGAGGCAAC...GGATGCTACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000640769.2
CDS-3UTR TCA 90 bp TCTTCTCGTGCCTGTGACTCTGTCAGAACCAAGAGGTCTAACAGTGGGTTTGCAGTTGCCTCTCCTGAATaGGATCAGCGTAGCAGATTA +
Preference number: 4 (lower is better)
Translates to: SSRACDSVRTKRSNSGFAVASPE*DQRSRL
Trigger: TAATCTGCTACGCTGATCTCATTCAGGAGAGGCAAC...TGCAAACCCACTGTTAGACCTCTTGGTTCTGACAGAGTCACAGGCACGAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR TCA 90 bp TCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGGTTGCCTCTCCTGAATaGGATCAGCGTAGCAGATTA +
Preference number: 4 (lower is better)
Translates to: SGNSCYTQLASTLAPLLMVASPE*DQRSRL
Trigger: TAATCTGCTACGCTGATCTCATTCAGGAGAGGCAAC...CATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000640769.2
CDS-3UTR TCA 90 bp AGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCGAACGGACGGGAAATTaGACCATTCCAGCAAATGAA +
Preference number: 4 (lower is better)
Translates to: SCYTQLASTLAPLLMTVSERTGN*TIPANE
Trigger: TTCATTTGCTGGAATGGTTCAATTTCCCGTCCGTTC...GCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000640769.2
CDS-3UTR TCA 90 bp TTCTGGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTTCCCATATCCAAAGGTaGATGAACGGATATCCTGGA +
Preference number: 4 (lower is better)
Translates to: FWRAATTGRCWSITSSLSSHIQR*MNGYPG
Trigger: TCCAGGATATCCGTTCATTCACCTTTGGATATGGGA...AGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR TCA 90 bp CTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGTCCCATATCCAAAGGTaGATGAACGGATATCCTGGA +
Preference number: 4 (lower is better)
Translates to: LPQLDGVGVSPVLSLMGKSHIQR*MNGYPG
Trigger: TCCAGGATATCCGTTCATTCACCTTTGGATATGGGA...CTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR TCA 90 bp ACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGAAAACTGGGGAAGACTaGGCTGCTGGAATTGTAGTT +
Preference number: 4 (lower is better)
Translates to: TSSGNSCYTQLASTLAPLKTGED*AAGIVV
Trigger: AACTACAATTCCAGCAGCTCAGTCTTCCCCAGTTTT...CAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR TCA 90 bp CAGTCCTGCAGCCCACTAGCCATGTGTGTTATCTTCAGAGTGAGGATGTCCTCTAAAACTGGGGAAGACTaGGCTGCTGGAATTGTAGTT +
Preference number: 4 (lower is better)
Translates to: QSCSPLAMCVIFRVRMSSKTGED*AAGIVV
Trigger: AACTACAATTCCAGCAGCTCAGTCTTCCCCAGTTTT...AGAGGACATCCTCACTCTGAAGATAACACACATGGCTAGTGGGCTGCAGGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp AGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGGCTGCTCCAAACTaGTACTACTTTTATGGTAGC +
Preference number: 4 (lower is better)
Translates to: STSSGNSCYTQLASTLAPLAAPN*YYFYGS
Trigger: GCTACCATAAAAGTAGTATCAGTTTGGAGCAGCCAG...GGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR TCA 90 bp GCAGGCCATAGAAATGAGGCGCATCCGTCACTTTCAGACACTGGAGCAGTTTCAAGTAATGGACTGGCCTaGGCAGATTTCCAGATCTTT +
Preference number: 4 (lower is better)
Translates to: AGHRNEAHPSLSDTGAVSSNGLA*ADFQIF
Trigger: AAAGATCTGGAAATCTGCTCAGGCCAGTCCATTACT...TGAAACTGCTCCAGTGTCTGAAAGTGACGGATGCGCCTCATTTCTATGGCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp AAATGTTCTGACAACTGTTTGCTAAGGCCACACAGCCCGTTTCAAGGGTGGTCAACTCGTGGCAATGGGTaGGACAACATATGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: KCSDNCLLRPHSPFQGWSTRGNG*DNIWRS
Trigger: GCTTCTCCATATGTTGTCTCACCCATTGCCACGAGT...TGACCACCCTTGAAACGGGCTGTGTGGCCTTAGCAAACAGTTGTCAGAACATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp GCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAACTAAACATTCCTTCGTaGTTTCCAGACAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: AATTGRCWSITSSLSHGKLNIPS*FPDSSG
Trigger: ACCACTGCTGTCTGGAAATCACGAAGGAATGTTTAG...TTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR TCA 90 bp CTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGCTAAACATTCCTTCGTaGTTTCCAGACAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: LPQLDGVGVSPVLSLMGKLNIPS*FPDSSG
Trigger: ACCACTGCTGTCTGGAAATCACGAAGGAATGTTTAG...CTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR TCA 90 bp GGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGTCACTTTCGGGCTCTTaGATGCCAAATACAGAGATT +
Preference number: 4 (lower is better)
Translates to: GELPQLDGVGVSPVLSLMSLSGS*MPNTEI
Trigger: AATCTCTGTATTTGGCATTCAAGAGCCCGAAAGTGA...CATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR TCA 90 bp AGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGATCATCAATCGTCCCTaGAGCAGGTATAACAGAATG +
Preference number: 4 (lower is better)
Translates to: RAATTGRCWSITSSLSHGIINRP*SRYNRM
Trigger: CATTCTGTTATACCTGCTTCAGGGACGATTGATGAT...CCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR TCA 90 bp AAGGCCAGAGAGAGTGCAAGACAGGGACAAGGTGAGCTTCAAGAGCTGCTTCTTCCTGTAGTATTGGGATaGCAGGACAGAGAGATTCAA +
Preference number: 4 (lower is better)
Translates to: KARESARQGQGELQELLLPVVLG*QDREIQ
Trigger: TTGAATCTCTCTGTCCTGTCATCCCAATACTACAGG...AAGAAGCAGCTCTTGAAGCTCACCTTGTCCCTGTCTTGCACTCTCTCTGGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR TCA 90 bp GTTTCTTCTCGTGCCTGTGACTCTGTCAGAACCAAGAGGTCTAACAGTGGGTTTCCTTCCTCAAGAGTGTaGGGCATGGTTGTACCAAAC +
Preference number: 4 (lower is better)
Translates to: VSSRACDSVRTKRSNSGFPSSRV*GMVVPN
Trigger: GTTTGGTACAACCATGCCTCACACTCTTGAGGAAGG...AAACCCACTGTTAGACCTCTTGGTTCTGACAGAGTCACAGGCACGAGAAGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp GTTTCTTCTCGTGCCTGTGACTCTGTCAGAACCAAGAGGTCTAACAGTGGGTTTCGGAAACAGGCAAACTaGAGACCGATGGCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: VSSRACDSVRTKRSNSGFRKQAN*RPMAKK
Trigger: CTTCTTTGCCATCGGTCTTCAGTTTGCCTGTTTCCG...AAACCCACTGTTAGACCTCTTGGTTCTGACAGAGTCACAGGCACGAGAAGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp GAAAGGAATTGCAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGACAAGCCTTGGTGTCCAATTACATaGACAGGTAGATGGTACCTT +
Preference number: 4 (lower is better)
Translates to: ERNCKLAVYRAGHVADKPWCPIT*TGRWYL
Trigger: AAGGTACCATCTACCTGTTCATGTAATTGGACACCA...AGGCTTGTCTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAATTCCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp AGTATACAGGGCAGGACACGTGGCAGACAAGCCTGCACATGTGCAGAACATATCACTCCCATGATACCATaGCAGGTTCCAAGCTATTCT +
Preference number: 4 (lower is better)
Translates to: SIQGRTRGRQACTCAEHITPMIP*QVPSYS
Trigger: AGAATAGCTTGGAACCTGTCATGGTATCATGGGAGT...GATATGTTCTGCACATGTGCAGGCTTGTCTGCCACGTGTCCTGCCCTGTATACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp TATGAGGGTAGCATCTGCAATGCTACAGAGAAGTTCTATGAGATGAGCTTGTCGCTGTGGGTTGCAGCCTaGACAATGGAATGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: YEGSICNATEKFYEMSLSLWVAA*TMEWRQ
Trigger: CTGCCTCCATTCCATTGTTCAGGCTGCAACCCACAG...CGACAAGCTCATCTCATAGAACTTCTCTGTAGCATTGCAGATGCTACCCTCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp TTTTTCACTAGCAAAAGTCGCAGCATGGACTTTAATCGGGTAGTACACGGAAGCCTGTGGGTTGCAGCCTaGACAATGGAATGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: FFTSKSRSMDFNRVVHGSLWVAA*TMEWRQ
Trigger: CTGCCTCCATTCCATTGTTCAGGCTGCAACCCACAG...GCTTCCGTGTACTACCCGATTAAAGTCCATGCTGCGACTTTTGCTAGTGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR TCA 90 bp GACTTCAAGGTAACCCCACATGGACCAGGGCAACCCTTTAAAGACAATCTGTCATTCTTCTCGTGCCTGTaGCTCTGTCAGAACCAAGAG +
Preference number: 4 (lower is better)
Translates to: DFKVTPHGPGQPFKDNLSFFSCL*LCQNQE
Trigger: CTCTTGGTTCTGACAGAGTCACAGGCACGAGAAGAA...TGACAGATTGTCTTTAAAGGGTTGCCCTGGTCCATGTGGGGTTACCTTGAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp GCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCATCTGAAGTTGTTGCCTaGCAGCAGTCCGGATATCAT +
Preference number: 4 (lower is better)
Translates to: AGFNFSSPVDDCQLQGVASEVVA*QQSGYH
Trigger: ATGATATCCGGACTGCTGTCAGGCAACAACTTCAGA...TGCTACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGCAATCAGTTCTTTCTaGAGTTGTTGCCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: AATTGRCWSITSSLSHGKAISSF*SCCLTA
Trigger: TGCTGTCAGGCAACAACTTCAGAAAGAACTGATTGC...TTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGGCAATCAGTTCTTTCTaGAGTTGTTGCCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: AQKVVSCYYFWRAATTGRAISSF*SCCLTA
Trigger: TGCTGTCAGGCAACAACTTCAGAAAGAACTGATTGC...CCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp ACTTTCCAGACAGGCAGCAAGCACAGTAATGACTTTTTCATTAGCCAGGATCTTTGTGAGAGGAGAGTGTaGGCTCCATCCCGGAAACGC +
Preference number: 4 (lower is better)
Translates to: TFQTGSKHSNDFFISQDLCERRV*APSRKR
Trigger: GCGTTTCCGGGATGGAGCTCACACTCTCCTCTCACA...AAGATCCTGGCTAATGAAAAAGTCATTACTGTGCTTGCTGCCTGTCTGGAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp TCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGGACCTCAAGGAGACCTaGCAAGTACTTCACACAGAT +
Preference number: 4 (lower is better)
Translates to: SGNSCYTQLASTLAPLLMDLKET*QVLHTD
Trigger: ATCTGTGTGAAGTACTTGTCAGGTCTCCTTGAGGTC...CATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp AAGCATAAAAACCATCTGCTGAACCGTGGTGTTCTCCAGTGGCATCTGGGAAGCGACCTCAAGGAGACCTaGCAAGTACTTCACACAGAT +
Preference number: 4 (lower is better)
Translates to: KHKNHLLNRGVLQWHLGSDLKET*QVLHTD
Trigger: ATCTGTGTGAAGTACTTGTCAGGTCTCCTTGAGGTC...GCTTCCCAGATGCCACTGGAGAACACCACGGTTCAGCAGATGGTTTTTATGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp TGGGAAAGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACACTAATCCCAGTGAAGTaGATCTCACCTCTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: WERRGSTLCREVARLQVTLIPVK*ISPLGP
Trigger: GGGACCCAGAGGTGAGATTCACTTCACTGGGATTAG...TGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCTTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp AAATGTTCTGACAACTGTTTGCTAAGGCCACACAGCCCGTTTCAAGGGTGGTCATTCAGTACTCCCCAATaGAGGTGCCACCGTTGTTTC +
Preference number: 4 (lower is better)
Translates to: KCSDNCLLRPHSPFQGWSFSTPQ*RCHRCF
Trigger: GAAACAACGGTGGCACCTTCATTGGGGAGTACTGAA...TGACCACCCTTGAAACGGGCTGTGTGGCCTTAGCAAACAGTTGTCAGAACATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp GGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCATCCGACTGCACAAGTGGCTaGAATTCAGTACTCCCCAAT +
Preference number: 4 (lower is better)
Translates to: GFNFSSPVDDCQLQGVASDCTSG*NSVLPN
Trigger: ATTGGGGAGTACTGAATTTCAGCCACTTGTGCAGTC...GGATGCTACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp TGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCGAAAGAGATGAATCATaGGGTGGCCGTGGTGATGTA +
Preference number: 4 (lower is better)
Translates to: CYTQLASTLAPLLMTVSFERDES*GGRGDV
Trigger: TACATCACCACGGCCACCTCATGATTCATCTCTTTC...GAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp CCATCAAAATCCAAGGCCAGAGAGAGTGCAAGACAGGGACAAGGTGAGCTTCAAGAAAGAGATGAATCATaGGGTGGCCGTGGTGATGTA +
Preference number: 4 (lower is better)
Translates to: PSKSKARESARQGQGELQERDES*GGRGDV
Trigger: TACATCACCACGGCCACCTCATGATTCATCTCTTTC...TTGAAGCTCACCTTGTCCCTGTCTTGCACTCTCTCTGGCCTTGGATTTTGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp TCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGGAGGCTGCACATTGCTaGAAGAAGAGATGGAGTAAC +
Preference number: 4 (lower is better)
Translates to: SSGNSCYTQLASTLAPLLEAAHC*KKRWSN
Trigger: GTTACTCCATCTCTTCTTTCAGCAATGTGCAGCCTC...CAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp AAGCTGTTTTTGCCTTCTGATAATTGTAAATCAGAGCCCAAAGGGCAGCTGCTCAAGGCAGCAGGGCTCTaGGTTCCTGGACACATGTCT +
Preference number: 4 (lower is better)
Translates to: KLFLPSDNCKSEPKGQLLKAAGL*VPGHMS
Trigger: AGACATGTGTCCAGGAACTCAGAGCCCTGCTGCCTT...GAGCAGCTGCCCTTTGGGCTCTGATTTACAATTATCAGAAGGCAAAAACAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR TCA 90 bp AGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTATTCACAAGCTCATCCTaGATCACAAGGTCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: RGSTSSGNSCYTQLASTLFTSSS*ITRSGS
Trigger: GGAGCCTGACCTTGTGATTCAGGATGAGCTTGTGAA...TAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp AGTATACAGGGCAGGACACGTGGCAGACAAGCCTGCACATGTGCAGAACATATCAGAGTCATCAAGAAGTaGAGCCACTGTTGGACTACA +
Preference number: 4 (lower is better)
Translates to: SIQGRTRGRQACTCAEHIRVIKK*SHCWTT
Trigger: TGTAGTCCAACAGTGGCTTCACTTCTTGATGACTCT...GATATGTTCTGCACATGTGCAGGCTTGTCTGCCACGTGTCCTGCCCTGTATACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR TCA 90 bp ACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTATCTGTGCTCTTCTACTaGCAGCCAGCAGTGACATCA +
Preference number: 4 (lower is better)
Translates to: TAGFNFSSPVDDCQLQGVSVLFY*QPAVTS
Trigger: TGATGTCACTGCTGGCTGTCAGTAGAAGAGCACAGA...TACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GACTTCAAGGTAACCCCACATGGACCAGGGCAACCCTTTAAAGACAATCTGTCAAAGACAGGGACAAGGTaGGCTTCAAGAGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: DFKVTPHGPGQPFKDNLSKTGTR*ASRAAS
Trigger: AGAAGCAGCTCTTGAAGCTCACCTTGTCCCTGTCTT...TGACAGATTGTCTTTAAAGGGTTGCCCTGGTCCATGTGGGGTTACCTTGAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR TCA 90 bp CTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAAAGACAGGGACAAGGTaGGCTTCAAGAGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: LHTAGFNFSSPVDDCQLQKTGTR*ASRAAS
Trigger: AGAAGCAGCTCTTGAAGCTCACCTTGTCCCTGTCTT...TTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp TTCTGGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTATAAAAACCATCTGCTaGACCGTGGTGTTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: FWRAATTGRCWSITSSLSIKTIC*TVVFSS
Trigger: ACTGGAGAACACCACGGTTCAGCAGATGGTTTTTAT...AGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCCAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAATAAAAACCATCTGCTaGACCGTGGTGTTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: AATTGRCWSITSSLSHGKIKTIC*TVVFSS
Trigger: ACTGGAGAACACCACGGTTCAGCAGATGGTTTTTAT...TTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp ACAAACGGGAGTGTGATGGCACCAGCTTTCCTCAGGAGCATGGCCAGAAGATTACATGATGTTTTGGGCTaGGCTAAATTTGAACCCAGG +
Preference number: 4 (lower is better)
Translates to: TNGSVMAPAFLRSMARRLHDVLG*AKFEPR
Trigger: CCTGGGTTCAAATTTAGCTCAGCCCAAAACATCATG...TAATCTTCTGGCCATGCTCCTGAGGAAAGCTGGTGCCATCACACTCCCGTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639487.1
CDS-3UTR TCA 90 bp CCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGCCAGAGTCCTCATCATaGACACAGGGACCATACAAA +
Preference number: 4 (lower is better)
Translates to: PQLDGVGVSPVLSLMGKKPESSS*TQGPYK
Trigger: TTTGTATGGTCCCTGTGTTCATGATGAGGACTCTGG...CTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679113.1
CDS-3UTR GCA 90 bp TTCTGGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTGGCGGCACTTCCATCTaGTGGAAATTACTTTTGTCT +
Preference number: 4 (lower is better)
Translates to: FWRAATTGRCWSITSSLSGGTSI*WKLLLS
Trigger: AGACAAAAGTAATTTCCAGCAGATGGAAGTGCCGCC...AGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255674.11
ENST00000640769.2
CDS-3UTR GCA 90 bp AAAAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGAAATACATGCACAGCTaGTGCAGGCAGGACACCGAC +
Preference number: 4 (lower is better)
Translates to: KRHRKLSAAITSGELPQLKYMHS*CRQDTD
Trigger: GTCGGTGTCCTGCCTGCAGCAGCTGTGCATGTATTT...CAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR GCA 90 bp TTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAATGGGTCGCTGGCCTGTaGGCCCAACCACAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: LCSQNFLCLFNRKEKAQKWVAGL*AQPQKA
Trigger: GGCCTTCTGTGGTTGGGCGCACAGGCCAGCGACCCA...TTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR GCA 90 bp TTCTGGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTAGCATCACCTCTGGCTaGTCCAAACTGATACTACTT +
Preference number: 4 (lower is better)
Translates to: FWRAATTGRCWSITSSLSSITSG*SKLILL
Trigger: AAGTAGTATCAGTTTGGAGCAGCCAGAGGTGATGCT...AGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR GCA 90 bp TGGGAAAGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACAAAGGCCATTCTGTGGTaGACAAGCATCACCTCTGGC +
Preference number: 4 (lower is better)
Translates to: WERRGSTLCREVARLQVTKAILW*TSITSG
Trigger: GCCAGAGGTGATGCTTGTGCACCACAGAATGGCCTT...TGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCTTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR GCA 90 bp ACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGCTTGTTCCAGGTCAATaGTGTCATCATCAATCGTCC +
Preference number: 4 (lower is better)
Translates to: TSSGNSCYTQLASTLAPLLVPGQ*CHHQSS
Trigger: GGACGATTGATGATGACAGCATTGACCTGGAACAAG...CAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR GCA 90 bp AGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGTGCTTAGAAGGAGAATaGAGTTACCCAGAGGATCTT +
Preference number: 4 (lower is better)
Translates to: RAATTGRCWSITSSLSHGCLEGE*SYPEDL
Trigger: AAGATCCTCTGGGTAACTGCATTCTCCTTCTAAGCA...CCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
CDS-3UTR GCA 90 bp CTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAACTGTTTAGTGCGGTGTaGCAAGCCAAGGACTTCAAG +
Preference number: 4 (lower is better)
Translates to: LHTAGFNFSSPVDDCQLQLFSAV*QAKDFK
Trigger: CTTGAAGTCCTTGGCTTGGCACACCGCACTAAACAG...TTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000679113.1
CDS-3UTR GCA 90 bp TGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAAGGTTGTCCAAGAGGCTaGACATTGCTGAAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: CREVARLQVTAATHSWLQGCPRG*TLLKEE
Trigger: CTCTTCTTTCAGCAATGTGCAGCCTCTTGGACAACC...TTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp GGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCATCCGGTTGTCCAAGAGGCTaGACATTGCTGAAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: GFNFSSPVDDCQLQGVASGCPRG*TLLKEE
Trigger: CTCTTCTTTCAGCAATGTGCAGCCTCTTGGACAACC...GGATGCTACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp CTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGTTGTCGAAAAGCCTTTaGAGTGTCTCTGGGAGCAAT +
Preference number: 4 (lower is better)
Translates to: LPQLDGVGVSPVLSLMGKLSKSL*SVSGSN
Trigger: ATTGCTCCCAGAGACACTGCAAAGGCTTTTCGACAA...CTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp GGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGACCAATAAACATGACTaGAGAAGCCTGGACAAAGAG +
Preference number: 4 (lower is better)
Translates to: GELPQLDGVGVSPVLSLMTNKHD*RSLDKE
Trigger: CTCTTTGTCCAGGCTTCTGCAGTCATGTTTATTGGT...CATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAAACAAGCCTGCACATGTaGAGAACATATCAATCGCCG +
Preference number: 4 (lower is better)
Translates to: CREVARLQVTAATHSWLQTSLHM*RTYQSP
Trigger: CGGCGATTGATATGTTCTGCACATGTGCAGGCTTGT...TTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp AGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTACGTGGCAGACAAGCCTaGACATGTGCAGAACATATC +
Preference number: 4 (lower is better)
Translates to: RGSTSSGNSCYTQLASTLRGRQA*TCAEHI
Trigger: GATATGTTCTGCACATGTGCAGGCTTGTCTGCCACG...TAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TGGGAAGCCAACTTTAGGATACACAGCATCAGAGAGTTGCTCACGGCTCCTCTACTGGAGATGCCCTTTTaGTTCTTCGGTCAAGAGAAC +
Preference number: 4 (lower is better)
Translates to: WEANFRIHSIRELLTAPLLEMPF*FFGQEN
Trigger: GTTCTCTTGACCGAAGAAGCAAAAGGGCATCTCCAG...TAGAGGAGCCGTGAGCAACTCTCTGATGCTGTGTATCCTAAAGTTGGCTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp CCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGCTGGAGATGCCCTTTTaGTTCTTCGGTCAAGAGAAC +
Preference number: 4 (lower is better)
Translates to: PQLDGVGVSPVLSLMGKKLEMPF*FFGQEN
Trigger: GTTCTCTTGACCGAAGAAGCAAAAGGGCATCTCCAG...CTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp AGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGCAGTTTCTTAGGAGCTaGATGGCAATGCTTAACTCT +
Preference number: 4 (lower is better)
Translates to: RAATTGRCWSITSSLSHGQFLRS*MAMLNS
Trigger: AGAGTTAAGCATTGCCATGCAGCTCCTAAGAAACTG...CCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TGCAGCCCACTAGCCATGTGTGTTATCTTCAGAGTGAGGATGTCCTCTGTAGATACAGCATCAGAGAGTTaGTCACGGCTCCTCTATGTG +
Preference number: 4 (lower is better)
Translates to: CSPLAMCVIFRVRMSSVDTASES*SRLLYV
Trigger: CACATAGAGGAGCCGTGAGCAACTCTCTGATGCTGT...ATCTACAGAGGACATCCTCACTCTGAAGATAACACACATGGCTAGTGGGCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR GCA 90 bp GCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAACTCCTTTACAGTCATaGGACAAGGCCAGGTTTGAA +
Preference number: 4 (lower is better)
Translates to: AATTGRCWSITSSLSHGKTPLQS*DKARFE
Trigger: TTCAAACCTGGCCTTGTCGCATGACTGTAAAGGAGT...TTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp CTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGACTCCTTTACAGTCATaGGACAAGGCCAGGTTTGAA +
Preference number: 4 (lower is better)
Translates to: LPQLDGVGVSPVLSLMGKTPLQS*DKARFE
Trigger: TTCAAACCTGGCCTTGTCGCATGACTGTAAAGGAGT...CTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp GGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGACTCCTTTACAGTCATaGGACAAGGCCAGGTTTGAA +
Preference number: 4 (lower is better)
Translates to: GTESCQLLLLLESCHNWTTPLQS*DKARFE
Trigger: TTCAAACCTGGCCTTGTCGCATGACTGTAAAGGAGT...CGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp CCATCCCTCGTAAGGTCCGCTCAAGGGACGGCAGGCCATAGAAATGAGGCGCATTCTTGTGCTTGTATTTaGTCATCTCTGTTAGTAAGT +
Preference number: 4 (lower is better)
Translates to: PSLVRSAQGTAGHRNEAHSCACI*SSLLVS
Trigger: ACTTACTAACAGAGATGAGCAAATACAAGCACAAGA...ATGCGCCTCATTTCTATGGCCTGCCGTCCCTTGAGCGGACCTTACGAGGGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR GCA 90 bp GCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAGGCAATAAAGGGCTaGTCTTGTGCTTGTATTTGC +
Preference number: 4 (lower is better)
Translates to: AATTGRCWSITSSLSHGKEAIKG*SCACIC
Trigger: GCAAATACAAGCACAAGAGCAGCCCTTTATTGCCTC...TTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp ACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGGAGGCAATAAAGGGCTaGTCTTGTGCTTGTATTTGC +
Preference number: 4 (lower is better)
Translates to: TSSGNSCYTQLASTLAPLEAIKG*SCACIC
Trigger: GCAAATACAAGCACAAGAGCAGCCCTTTATTGCCTC...CAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp CAAGCTCATCCTGAATCACAAGGTCAGGCTCCACCAATAAACATGACTGCAGAAAGCCCAAAGGGCAGCTaGTCCAATCCTCTGAGCATT +
Preference number: 4 (lower is better)
Translates to: QAHPESQGQAPPINMTAESPKGS*SNPLSI
Trigger: AATGCTCAGAGGATTGGAGCAGCTGCCCTTTGGGCT...TTCTGCAGTCATGTTTATTGGTGGAGCCTGACCTTGTGATTCAGGATGAGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR GCA 90 bp CACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGTTCTTCAGGTAACAGCTaGTACACACAGCTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: HRKLSAAITSGELPQLDGSSGNS*YTQLAS
Trigger: TGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGA...ACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp CAAGGTGTAGCATCCCATGGCACTCAGGAAGAATTAAGGAGCTGCACGAGGTTTTCTTCAGGTAACAGCTaGTACACACAGCTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: QGVASHGTQEELRSCTRFSSGNS*YTQLAS
Trigger: TGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGA...AAACCTCGTGCAGCTCCTTAATTCTTCCTGAGTGCCATGGGATGCTACACCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TGCCTTCTGATAATTGTAAATCAGAGCCCAAAGGGCAGCTGCTCCAATCCTCTGTTGAAGAGATTCTCGTaGCTCAGCCACTGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: CLLIIVNQSPKGSCSNPLLKRFS*LSHWSS
Trigger: GCTACTCCAGTGGCTGAGGCACGAGAATCTCTTCAA...CAGAGGATTGGAGCAGCTGCCCTTTGGGCTCTGATTTACAATTATCAGAAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639487.1
CDS-3UTR GCA 90 bp CACATGTGCAGAACATATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGTCCATTTGGAAAATTTaGAGTATAGACACAAAGGAG +
Preference number: 4 (lower is better)
Translates to: HMCRTYQSPLSSAWPGPRSIWKI*SIDTKE
Trigger: CTCCTTTGTGTCTATACTGCAAATTTTCCAAATGGA...CCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGATATGTTCTGCACATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679113.1
CDS-3UTR CCA 90 bp GGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGCAAATGTTGGACTGCTaGGGGATACTTAACCAATCT +
Preference number: 4 (lower is better)
Translates to: GELPQLDGVGVSPVLSLMQMLDC*GILNQS
Trigger: AGATTGGTTAAGTATCCCCCAGCAGTCCAACATTTG...CATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255674.11
ENST00000640769.2
CDS-3UTR CCA 90 bp ACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGACGTCAACCAAATGTTaGACTGCTGGGGGATACTTA +
Preference number: 4 (lower is better)
Translates to: TSSGNSCYTQLASTLAPLTSTKC*TAGGYL
Trigger: TAAGTATCCCCCAGCAGTCCAACATTTGGTTGACGT...CAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000640769.2
CDS-3UTR CCA 90 bp CAGACACTGGAGCAGTTTCAGAGCCAGCTGCGTTTGAAAAACGTAAAGAAGTTCATTTACCACTGGTCGTaGCGGCACTTCCATCTGCTG +
Preference number: 4 (lower is better)
Translates to: QTLEQFQSQLRLKNVKKFIYHWS*RHFHLL
Trigger: CAGCAGATGGAAGTGCCGCCACGACCAGTGGTAAAT...GAACTTCTTTACGTTTTTCAAACGCAGCTGGCTCTGAAACTGCTCCAGTGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR CCA 90 bp ACTAGCAAAAGTCGCAGCATGGACTTTAATCGGGTAGTACACGGAAGCATCTCTCATGTCTGTCTGTGGTaGTCAGGGGTAGCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: TSKSRSMDFNRVVHGSISHVCLW*SGVAKE
Trigger: TTCCTTGGCTACCCCTGACCACCACAGACAGACATG...AGAGATGCTTCCGTGTACTACCCGATTAAAGTCCATGCTGCGACTTTTGCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR CCA 90 bp GCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAATTCAGTTTCCAGCTCTaGCAGATCTATGTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: AATTGRCWSITSSLSHGKFSFQL*QIYVSH
Trigger: ATGGGACACATAGATCTGCCAGAGCTGGAAACTGAA...TTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CCA 90 bp GCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGGGAAGACTGAGCTGCTaGAATTGTAGTTCCAATGTG +
Preference number: 4 (lower is better)
Translates to: AQKVVSCYYFWRAATTGRGRLSC*NCSSNV
Trigger: CACATTGGAACTACAATTCCAGCAGCTCAGTCTTCC...CCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CCA 90 bp AGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCAGCTGATTCCAGAATaGAGACACAAAACTGGGGAA +
Preference number: 4 (lower is better)
Translates to: STSSGNSCYTQLASTLAPQLIPE*RHKTGE
Trigger: TTCCCCAGTTTTGTGTCTCCATTCTGGAATCAGCTG...GGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CCA 90 bp AAGGCCAGAGAGAGTGCAAGACAGGGACAAGGTGAGCTTCAAGAGCTGCTTCTTCAGCTGATTCCAGAATaGAGACACAAAACTGGGGAA +
Preference number: 4 (lower is better)
Translates to: KARESARQGQGELQELLLQLIPE*RHKTGE
Trigger: TTCCCCAGTTTTGTGTCTCCATTCTGGAATCAGCTG...AAGAAGCAGCTCTTGAAGCTCACCTTGTCCCTGTCTTGCACTCTCTCTGGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CCA 90 bp TGGTGTTCTCCAGTGGCATCTGGGAAGCCAACTTTAGGATACACAGCATCAGAGCACAAGCATCACCTCTaGCTGCTCCAAACTGATACT +
Preference number: 4 (lower is better)
Translates to: WCSPVASGKPTLGYTASEHKHHL*LLQTDT
Trigger: AGTATCAGTTTGGAGCAGCCAGAGGTGATGCTTGTG...CTCTGATGCTGTGTATCCTAAAGTTGGCTTCCCAGATGCCACTGGAGAACACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CCA 90 bp CATCCGTCACTTTCAGACACTGGAGCAGTTTCAGAGCCAGCTGCGTTTGAAAAAAAGCTACGCAAGGCTTaGTCTGCCAGCTCCACTAAT +
Preference number: 4 (lower is better)
Translates to: HPSLSDTGAVSEPAAFEKKLRKA*SASSTN
Trigger: ATTAGTGGAGCTGGCAGACCAAGCCTTGCGTAGCTT...TTTTTCAAACGCAGCTGGCTCTGAAACTGCTCCAGTGTCTGAAAGTGACGGATG
49% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CCA 90 bp ACAAACGGGAGTGTGATGGCACCAGCTTTCCTCAGGAGCATGGCCAGAAGATTACTTGTAGTAATGGACTaGCCTGAGCAGATTTCCAGA +
Preference number: 4 (lower is better)
Translates to: TNGSVMAPAFLRSMARRLLVVMD*PEQISR
Trigger: TCTGGAAATCTGCTCAGGCCAGTCCATTACTACAAG...TAATCTTCTGGCCATGCTCCTGAGGAAAGCTGGTGCCATCACACTCCCGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CCA 90 bp GCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGCTTGTAGTAATGGACTaGCCTGAGCAGATTTCCAGA +
Preference number: 4 (lower is better)
Translates to: AQKVVSCYYFWRAATTGRLVVMD*PEQISR
Trigger: TCTGGAAATCTGCTCAGGCCAGTCCATTACTACAAG...CCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CCA 90 bp AGGTCCGCTCAAGGGACGGCAGGCCATAGAAATGAGGCGCATCCGTCACTTTCAGGTTTAGTGACATTATaGACACCTAAACATTCCTTC +
Preference number: 4 (lower is better)
Translates to: RSAQGTAGHRNEAHPSLSGLVTL*TPKHSF
Trigger: GAAGGAATGTTTAGGTGTCCATAATGTCACTAAACC...TGAAAGTGACGGATGCGCCTCATTTCTATGGCCTGCCGTCCCTTGAGCGGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CCA 90 bp GTAAGGTCCGCTCAAGGGACGGCAGGCCATAGAAATGAGGCGCATCCGTCACTTGGTTTAGTGACATTATaGACACCTAAACATTCCTTC +
Preference number: 4 (lower is better)
Translates to: VRSAQGTAGHRNEAHPSLGLVTL*TPKHSF
Trigger: GAAGGAATGTTTAGGTGTCCATAATGTCACTAAACC...AAGTGACGGATGCGCCTCATTTCTATGGCCTGCCGTCCCTTGAGCGGACCTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CCA 90 bp TGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCATAACAGAATGGCCTTaGCAGCAGTGTTCACCTCAC +
Preference number: 4 (lower is better)
Translates to: CYTQLASTLAPLLMTVSFITEWP*QQCSPH
Trigger: GTGAGGTGAACACTGCTGCCAAGGCCATTCTGTTAT...GAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CCA 90 bp TGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAAGCAGGTATAACAGAATaGCCTTGGCAGCAGTGTTCA +
Preference number: 4 (lower is better)
Translates to: CREVARLQVTAATHSWLQAGITE*PWQQCS
Trigger: TGAACACTGCTGCCAAGGCCATTCTGTTATACCTGC...TTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CCA 90 bp TCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGGCAGGTATAACAGAATaGCCTTGGCAGCAGTGTTCA +
Preference number: 4 (lower is better)
Translates to: SGNSCYTQLASTLAPLLMAGITE*PWQQCS
Trigger: TGAACACTGCTGCCAAGGCCATTCTGTTATACCTGC...CATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CCA 90 bp ACTCTGGCGTCTATTAGAGGACGCTTTGTATCAGCCCCTTCTTCACTGGTAAGATTGCAGCCTGAACAATaGAATGGAGGCAGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: TLASIRGRFVSAPSSLVRLQPEQ*NGGSPA
Trigger: TGCAGGACTGCCTCCATTCCATTGTTCAGGCTGCAA...TCTTACCAGTGAAGAAGGGGCTGATACAAAGCGTCCTCTAATAGACGCCAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR CCA 90 bp ATTGCAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGACAAGCCTGCACATGATACTACATTCTGACTaGTCCAGAAGAATGTTCACC +
Preference number: 4 (lower is better)
Translates to: IASWQYTGQDTWQTSLHMILHSD*SRRMFT
Trigger: GGTGAACATTCTTCTGGACCAGTCAGAATGTAGTAT...CATGTGCAGGCTTGTCTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CCA 90 bp ACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGCTGACTTGTCCTAGATaGAGCCCTCCAAAACTTGAA +
Preference number: 4 (lower is better)
Translates to: TSSGNSCYTQLASTLAPLLTCPR*SPPKLE
Trigger: TTCAAGTTTTGGAGGGCTCCATCTAGGACAAGTCAG...CAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp AAGCATAAAAACCATCTGCTGAACCGTGGTGTTCTCCAGTGGCATCTGGGAAGCGGTGGAGAGAGAACTTaGATCTCGATCCTGACTTGT +
Preference number: 4 (lower is better)
Translates to: KHKNHLLNRGVLQWHLGSGGERT*ISILTC
Trigger: ACAAGTCAGGATCGAGATCCAAGTTCTCTCTCCACC...GCTTCCCAGATGCCACTGGAGAACACCACGGTTCAGCAGATGGTTTTTATGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CCA 90 bp CCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGGGTGGAGAGAGAACTTaGATCTCGATCCTGACTTGT +
Preference number: 4 (lower is better)
Translates to: PQLDGVGVSPVLSLMGKKGGERT*ISILTC
Trigger: ACAAGTCAGGATCGAGATCCAAGTTCTCTCTCCACC...CTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp TCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGCCGTTGTTTCTGAGGTaGAGAGAGAACTTGGATCTC +
Preference number: 4 (lower is better)
Translates to: SGNSCYTQLASTLAPLLMPLFLR*RENLDL
Trigger: GAGATCCAAGTTCTCTCTCCACCTCAGAAACAACGG...CATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp CTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAACCTTTGCAGTGTCTCTaGGAGCAATCGTCAAGAGGT +
Preference number: 4 (lower is better)
Translates to: LHTAGFNFSSPVDDCQLQPLQCL*EQSSRG
Trigger: ACCTCTTGACGATTGCTCCCAGAGACACTGCAAAGG...TTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp AGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTCCTTTGCAGTGTCTCTaGGAGCAATCGTCAAGAGGT +
Preference number: 4 (lower is better)
Translates to: RRGSTLCREVARLQVTAAPLQCL*EQSSRG
Trigger: ACCTCTTGACGATTGCTCCCAGAGACACTGCAAAGG...AGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp AGACAGGCAGCAAGCACAGTAATGACTTTTTCATTAGCCAGGATCTTGGGTTTAACAGGGCAGGACACGTaGCAGACAAGCCTGCACATG +
Preference number: 4 (lower is better)
Translates to: RQAASTVMTFSLARILGLTGQDT*QTSLHM
Trigger: CATGTGCAGGCTTGTCTGCCACGTGTCCTGCCCTGT...TAAACCCAAGATCCTGGCTAATGAAAAAGTCATTACTGTGCTTGCTGCCTGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CCA 90 bp TTCTGGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTGTTTTGCTCTTAGCCTaGAGATGCCCTTTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: FWRAATTGRCWSITSSLSVLLLA*RCPFAS
Trigger: AGAAGCAAAAGGGCATCTCCAGGCTAAGAGCAAAAC...AGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp GCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGTTTTGCTCTTAGCCTaGAGATGCCCTTTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: AATTGRCWSITSSLSHGKVLLLA*RCPFAS
Trigger: AGAAGCAAAAGGGCATCTCCAGGCTAAGAGCAAAAC...TTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp CATGTGCAGAACATATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGTATTTTCAGGATATCTTTaGAGGATTTCCCTTCATAGC +
Preference number: 4 (lower is better)
Translates to: HVQNISIAAVQCLARATVFSGYL*RISLHS
Trigger: GCTATGAAGGGAAATCCTCCAAAGATATCCTGAAAA...TACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGATATGTTCTGCACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CCA 90 bp AGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCTCCAGTGGCATCTaGGAAGCCAACTTTAGGATA +
Preference number: 4 (lower is better)
Translates to: SCYTQLASTLAPLLMTVSFSSGI*EANFRI
Trigger: TATCCTAAAGTTGGCTTCCCAGATGCCACTGGAGAA...GCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp GGCCATAGAAATGAGGCGCATCCGTCACTTTCAGACACTGGAGCAGTTTCAGAGTTCTCCAGTGGCATCTaGGAAGCCAACTTTAGGATA +
Preference number: 4 (lower is better)
Translates to: GHRNEAHPSLSDTGAVSEFSSGI*EANFRI
Trigger: TATCCTAAAGTTGGCTTCCCAGATGCCACTGGAGAA...CTCTGAAACTGCTCCAGTGTCTGAAAGTGACGGATGCGCCTCATTTCTATGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CCA 90 bp GCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAAGGTGTAGCATCCCATaGCACTCAGGAAGAATTAAG +
Preference number: 4 (lower is better)
Translates to: AATTGRCWSITSSLSHGKRCSIP*HSGRIK
Trigger: CTTAATTCTTCCTGAGTGCCATGGGATGCTACACCT...TTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp GGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGAGGTGTAGCATCCCATaGCACTCAGGAAGAATTAAG +
Preference number: 4 (lower is better)
Translates to: GTESCQLLLLLESCHNWTRCSIP*HSGRIK
Trigger: CTTAATTCTTCCTGAGTGCCATGGGATGCTACACCT...CGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp TGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAAACAACTGGACGGTGTTaGAGTATCACCAGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: CREVARLQVTAATHSWLQTTGRC*SITSSL
Trigger: GAGAGAACTGGTGATACTCCAACACCGTCCAGTTGT...TTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp CCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGACAACTGGACGGTGTTaGAGTATCACCAGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: PQLDGVGVSPVLSLMGKKTTGRC*SITSSL
Trigger: GAGAGAACTGGTGATACTCCAACACCGTCCAGTTGT...CTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp TGTGCTCTTCTACTGACAGCCAGCAGTGACATCAATGCATTTGCAGCTACTCTTGAGAGCTGCCACAACTaGACGGTGTTGGAGTATCAC +
Preference number: 4 (lower is better)
Translates to: CALLLTASSDINAFAATLESCHN*TVLEYH
Trigger: GTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTC...AAGAGTAGCTGCAAATGCATTGATGTCACTGCTGGCTGTCAGTAGAAGAGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CCA 90 bp TGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAAAGCTGCTATTACTTCTaGAGAGCTGCCACAACTGGA +
Preference number: 4 (lower is better)
Translates to: CREVARLQVTAATHSWLQSCYYF*RAATTG
Trigger: TCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCT...TTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp CACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGGAGCTGCTATTACTTCTaGAGAGCTGCCACAACTGGA +
Preference number: 4 (lower is better)
Translates to: HNWTVLEYHQFSLSWERRSCYYF*RAATTG
Trigger: TCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCT...CCTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp CCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGAGCTGCTATTACTTCTaGAGAGCTGCCACAACTGGA +
Preference number: 4 (lower is better)
Translates to: PQLDGVGVSPVLSLMGKKSCYYF*RAATTG
Trigger: TCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCT...CTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp ACAGAAAGGAATTGCAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGACAAGCTATGTCAGAGACCTTaGACAAGTCACTCATCTCTC +
Preference number: 4 (lower is better)
Translates to: TERNCKLAVYRAGHVADKLCQRP*TSHSSL
Trigger: GAGAGATGAGTGACTTGTCCAAGGTCTCTGACATAG...CTTGTCTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAATTCCTTTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679113.1
3UTR CAA 72 bp CAAACTGGTCATGGGAGGCTTCAGGTAGAAGTGTTGTaGACTGCACAAGTGGCTGAAATTCAGTACTCCCCA +
Preference number: 4 (lower is better)
Translates to: QTGHGRLQVEVL*TAQVAEIQYSP
Trigger: TGGGGAGTACTGAATTTCAGCCACTTGTGCAGTCAACAACACTTCTACCTGAAGCCTCCCATGACCAGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp TACTCCCCAATGAAGGTGCCACCGTTGTTTCTGAGGTGGAGAGAGAACTTGGATTCCCATATCCAAAGGTaGATGAACGGATATCCTGGA +
Preference number: 4 (lower is better)
Translates to: YSPMKVPPLFLRWRENLDSHIQR*MNGYPG
Trigger: TCCAGGATATCCGTTCATTCACCTTTGGATATGGGA...ATCCAAGTTCTCTCTCCACCTCAGAAACAACGGTGGCACCTTCATTGGGGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp GCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCAAAAACTGGGGAAGACTaGGCTGCTGGAATTGTAGTT +
Preference number: 4 (lower is better)
Translates to: AGFNFSSPVDDCQLQGVAKTGED*AAGIVV
Trigger: AACTACAATTCCAGCAGCTCAGTCTTCCCCAGTTTT...TGCTACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR TCA 90 bp GGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCATCCCTGGCTGCTCCAAACTaGTACTACTTTTATGGTAGC +
Preference number: 4 (lower is better)
Translates to: GFNFSSPVDDCQLQGVASLAAPN*YYFYGS
Trigger: GCTACCATAAAAGTAGTATCAGTTTGGAGCAGCCAG...GGATGCTACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR TCA 90 bp TCTTCTCGTGCCTGTGACTCTGTCAGAACCAAGAGGTCTAACAGTGGGTTTGCACTGGCTGCTCCAAACTaGTACTACTTTTATGGTAGC +
Preference number: 4 (lower is better)
Translates to: SSRACDSVRTKRSNSGFALAAPN*YYFYGS
Trigger: GCTACCATAAAAGTAGTATCAGTTTGGAGCAGCCAG...TGCAAACCCACTGTTAGACCTCTTGGTTCTGACAGAGTCACAGGCACGAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp TCTTCTCGTGCCTGTGACTCTGTCAGAACCAAGAGGTCTAACAGTGGGTTTGCAACAGGTGCATTCAATTaGATAAACGGCCTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: SSRACDSVRTKRSNSGFATGAFN*INGLCS
Trigger: ACTGCAGAGGCCGTTTATTCAATTGAATGCACCTGT...TGCAAACCCACTGTTAGACCTCTTGGTTCTGACAGAGTCACAGGCACGAGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp TCTGTTTCTTCTCGTGCCTGTGACTCTGTCAGAACCAAGAGGTCTAACAGTGGGACAGGTGCATTCAATTaGATAAACGGCCTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: SVSSRACDSVRTKRSNSGTGAFN*INGLCS
Trigger: ACTGCAGAGGCCGTTTATTCAATTGAATGCACCTGT...CCCACTGTTAGACCTCTTGGTTCTGACAGAGTCACAGGCACGAGAAGAAACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp TCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACAGGTGCATTCAATTaGATAAACGGCCTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: SGNSCYTQLASTLAPLLMTGAFN*INGLCS
Trigger: ACTGCAGAGGCCGTTTATTCAATTGAATGCACCTGT...CATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR TCA 90 bp CACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGTAGTAATGGACTGGCCTaGGCAGATTTCCAGATCTTT +
Preference number: 4 (lower is better)
Translates to: HRKLSAAITSGELPQLDGSNGLA*ADFQIF
Trigger: AAAGATCTGGAAATCTGCTCAGGCCAGTCCATTACT...ACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR TCA 90 bp GGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGAATTCCATTGCAAAGTaGAGACACGGGTTTAGTGAC +
Preference number: 4 (lower is better)
Translates to: GTESCQLLLLLESCHNWTNSIAK*RHGFSD
Trigger: GTCACTAAACCCGTGTCTTCACTTTGCAATGGAATT...CGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR TCA 90 bp AGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCATCATCAATCGTCCCTaGAGCAGGTATAACAGAATG +
Preference number: 4 (lower is better)
Translates to: SCYTQLASTLAPLLMTVSIINRP*SRYNRM
Trigger: CATTCTGTTATACCTGCTTCAGGGACGATTGATGAT...GCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR TCA 90 bp GGCCATAGAAATGAGGCGCATCCGTCACTTTCAGACACTGGAGCAGTTTCAGAGATCATCAATCGTCCCTaGAGCAGGTATAACAGAATG +
Preference number: 4 (lower is better)
Translates to: GHRNEAHPSLSDTGAVSEIINRP*SRYNRM
Trigger: CATTCTGTTATACCTGCTTCAGGGACGATTGATGAT...CTCTGAAACTGCTCCAGTGTCTGAAAGTGACGGATGCGCCTCATTTCTATGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp CCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGCCTGTAGTATTGGGATaGCAGGACAGAGAGATTCAA +
Preference number: 4 (lower is better)
Translates to: PQLDGVGVSPVLSLMGKKPVVLG*QDREIQ
Trigger: TTGAATCTCTCTGTCCTGTCATCCCAATACTACAGG...CTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR TCA 90 bp TCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGAGAGCGAAACACGCATaGCTGGATCACCACATAAAA +
Preference number: 4 (lower is better)
Translates to: SGNSCYTQLASTLAPLLMRAKHA*LDHHIK
Trigger: TTTTATGTGGTGATCCAGTCATGCGTGTTTCGCTCT...CATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
CDS-3UTR TCA 90 bp TTGACTGCACAAGTGGCTGAAATTCAGTACTCCCCAATGAAGGTGCCACCGTTGAGAGCGAAACACGCATaGCTGGATCACCACATAAAA +
Preference number: 4 (lower is better)
Translates to: LTAQVAEIQYSPMKVPPLRAKHA*LDHHIK
Trigger: TTTTATGTGGTGATCCAGTCATGCGTGTTTCGCTCT...CAACGGTGGCACCTTCATTGGGGAGTACTGAATTTCAGCCACTTGTGCAGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp AGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTTATTCTCAGCATATCTaGCACCGGCTTCAAGGCCAA +
Preference number: 4 (lower is better)
Translates to: RRGSTLCREVARLQVTAAYSQHI*HRLQGQ
Trigger: TTGGCCTTGAAGCCGGTGTCAGATATGCTGAGAATA...AGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000679113.1
CDS-3UTR TCA 90 bp CCGTGGTGTTCTCCAGTGGCATCTGGGAAGCCAACTTTAGGATACACAGCATCAAGATTATCACTCCCATaGTACCATGACAGGTTCCAA +
Preference number: 4 (lower is better)
Translates to: PWCSPVASGKPTLGYTASRLSLP*YHDRFQ
Trigger: TTGGAACCTGTCATGGTATCATGGGAGTGATAATCT...TGATGCTGTGTATCCTAAAGTTGGCTTCCCAGATGCCACTGGAGAACACCACGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp CCATCAAGCCTCAGAATCATTTGTTGCCCATCTTCTCCAGATGATATATTCAGGCTGTGGGTTGCAGCCTaGACAATGGAATGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PSSLRIICCPSSPDDIFRLWVAA*TMEWRQ
Trigger: CTGCCTCCATTCCATTGTTCAGGCTGCAACCCACAG...CCTGAATATATCATCTGGAGAAGATGGGCAACAAATGATTCTGAGGCTTGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp TCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGGCAATCAGTTCTTTCTaGAGTTGTTGCCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: SSGNSCYTQLASTLAPLLAISSF*SCCLTA
Trigger: TGCTGTCAGGCAACAACTTCAGAAAGAACTGATTGC...CAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp TGGAGTAAGGACTCACAGCATGGTGTCCAATTACATGAACAGGTAGATGGTACCTATCTAGAGGCTTTGTaGGAGGAGAGTGTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: WSKDSQHGVQLHEQVDGTYLEAL*EESVSS
Trigger: GGAGCTCACACTCTCCTCTCACAAAGCCTCTAGATA...GGTACCATCTACCTGTTCATGTAATTGGACACCATGCTGTGAGTCCTTACTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp GAAAGGAATTGCAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGACAAGCCTATCTCATGGGATAAGTaGAGCAAGCAAAGAATTGTG +
Preference number: 4 (lower is better)
Translates to: ERNCKLAVYRAGHVADKPISWDK*SKQRIV
Trigger: CACAATTCTTTGCTTGCTTCACTTATCCCATGAGAT...AGGCTTGTCTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAATTCCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp ACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGCACCATACTACATTCTaGCTGGTCCAGAAGAATGTT +
Preference number: 4 (lower is better)
Translates to: TSSGNSCYTQLASTLAPLHHTTF*LVQKNV
Trigger: AACATTCTTCTGGACCAGTCAGAATGTAGTATGGTG...CAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp CTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGCACCATACTACATTCTaGCTGGTCCAGAAGAATGTT +
Preference number: 4 (lower is better)
Translates to: LPQLDGVGVSPVLSLMGKHHTTF*LVQKNV
Trigger: AACATTCTTCTGGACCAGTCAGAATGTAGTATGGTG...CTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp AGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCCACCATACTACATTCTaGCTGGTCCAGAAGAATGTT +
Preference number: 4 (lower is better)
Translates to: SCYTQLASTLAPLLMTVSHHTTF*LVQKNV
Trigger: AACATTCTTCTGGACCAGTCAGAATGTAGTATGGTG...GCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp AGCAGGGCTCTGAGTTCCTGGACACATGTCTGTATGAGGGTAGCATCTGCAATGCACCATACTACATTCTaGCTGGTCCAGAAGAATGTT +
Preference number: 4 (lower is better)
Translates to: SRALSSWTHVCMRVASAMHHTTF*LVQKNV
Trigger: AACATTCTTCTGGACCAGTCAGAATGTAGTATGGTG...CATTGCAGATGCTACCCTCATACAGACATGTGTCCAGGAACTCAGAGCCCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp TGCTTGTATTTGCTCATCTCTGTTAGTAAGTCTAGACAGCCATCAAGCCTCAGACCAGAGTCCTCATCATaGACACAGGGACCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: CLYLLISVSKSRQPSSLRPESSS*TQGPCQ
Trigger: TTGGCAGGGTCCCTGTGTTCATGATGAGGACTCTGG...TCTGAGGCTTGATGGCTGTCTAGACTTACTAACAGAGATGAGCAAATACAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
CDS-3UTR TCA 90 bp GGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGAGCCCTCCAAAACTTaGATGAGTCATCTAAACCAT +
Preference number: 4 (lower is better)
Translates to: GTESCQLLLLLESCHNWTEPSKT*MSHLNH
Trigger: ATGGTTTAGATGACTCATTCAAGTTTTGGAGGGCTC...CGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp CCGTGGTGTTCTCCAGTGGCATCTGGGAAGCCAACTTTAGGATACACAGCATCAGAGCCCTCCAAAACTTaGATGAGTCATCTAAACCAT +
Preference number: 4 (lower is better)
Translates to: PWCSPVASGKPTLGYTASEPSKT*MSHLNH
Trigger: ATGGTTTAGATGACTCATTCAAGTTTTGGAGGGCTC...TGATGCTGTGTATCCTAAAGTTGGCTTCCCAGATGCCACTGGAGAACACCACGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp GCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGGAGCCCTCCAAAACTTaGATGAGTCATCTAAACCAT +
Preference number: 4 (lower is better)
Translates to: AQKVVSCYYFWRAATTGREPSKT*MSHLNH
Trigger: ATGGTTTAGATGACTCATTCAAGTTTTGGAGGGCTC...CCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp TATGAGGGTAGCATCTGCAATGCTACAGAGAAGTTCTATGAGATGAGCTTGTCGCTTGGATCTCGATCCTaGCTTGTCCTAGATGGAGCC +
Preference number: 4 (lower is better)
Translates to: YEGSICNATEKFYEMSLSLGSRS*LVLDGA
Trigger: GGCTCCATCTAGGACAAGTCAGGATCGAGATCCAAG...CGACAAGCTCATCTCATAGAACTTCTCTGTAGCATTGCAGATGCTACCCTCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp CTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGACTGCACAAGTGGCTaGAATTCAGTACTCCCCAAT +
Preference number: 4 (lower is better)
Translates to: LHTAGFNFSSPVDDCQLQDCTSG*NSVLPN
Trigger: ATTGGGGAGTACTGAATTTCAGCCACTTGTGCAGTC...TTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp AAATGTTCTGACAACTGTTTGCTAAGGCCACACAGCCCGTTTCAAGGGTGGTCAGACTGCACAAGTGGCTaGAATTCAGTACTCCCCAAT +
Preference number: 4 (lower is better)
Translates to: KCSDNCLLRPHSPFQGWSDCTSG*NSVLPN
Trigger: ATTGGGGAGTACTGAATTTCAGCCACTTGTGCAGTC...TGACCACCCTTGAAACGGGCTGTGTGGCCTTAGCAAACAGTTGTCAGAACATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp AGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGAAAGAGATGAATCATaGGGTGGCCGTGGTGATGTA +
Preference number: 4 (lower is better)
Translates to: RGSTSSGNSCYTQLASTLERDES*GGRGDV
Trigger: TACATCACCACGGCCACCTCATGATTCATCTCTTTC...TAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp TCTTGTGCTTGTATTTGCTCATCTCTGTTAGTAAGTCTAGACAGCCATCAAGCCGGGAGCAGAAAGAGATaGATCATGAGGTGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: SCACICSSLLVSLDSHQAGSRKR*IMRWPW
Trigger: CCACGGCCACCTCATGATTCATCTCTTTCTGCTCCC...GGCTTGATGGCTGTCTAGACTTACTAACAGAGATGAGCAAATACAAGCACAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp AAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGAGAGGCTGCACATTGCTaGAAGAAGAGATGGAGTAAC +
Preference number: 4 (lower is better)
Translates to: KAQKVVSCYYFWRAATTGEAAHC*KKRWSN
Trigger: GTTACTCCATCTCTTCTTTCAGCAATGTGCAGCCTC...TCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp CTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGAGGCTGCACATTGCTaGAAGAAGAGATGGAGTAAC +
Preference number: 4 (lower is better)
Translates to: LHTAGFNFSSPVDDCQLQEAAHC*KKRWSN
Trigger: GTTACTCCATCTCTTCTTTCAGCAATGTGCAGCCTC...TTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp ACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGAGGCTGCACATTGCTaGAAGAAGAGATGGAGTAAC +
Preference number: 4 (lower is better)
Translates to: TAGFNFSSPVDDCQLQGVEAAHC*KKRWSN
Trigger: GTTACTCCATCTCTTCTTTCAGCAATGTGCAGCCTC...TACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGTACAGAGAAGTTCTATaGGATGAGCTTGTCGAAAAG +
Preference number: 4 (lower is better)
Translates to: GELPQLDGVGVSPVLSLMYREVL*DELVEK
Trigger: CTTTTCGACAAGCTCATCTCATAGAACTTCTCTGTA...CATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GGCAATAAAGGGCTGCTCTTGTGCTTGTATTTGCTCATCTCTGTTAGTAAGTCTAAGGCAGCAGGGCTCTaGGTTCCTGGACACATGTCT +
Preference number: 4 (lower is better)
Translates to: GNKGLLLCLYLLISVSKSKAAGL*VPGHMS
Trigger: AGACATGTGTCCAGGAACTCAGAGCCCTGCTGCCTT...AGACTTACTAACAGAGATGAGCAAATACAAGCACAAGAGCAGCCCTTTATTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR TCA 90 bp CACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGTAGAGTCATCAAGAAGTaGAGCCACTGTTGGACTACA +
Preference number: 4 (lower is better)
Translates to: HRKLSAAITSGELPQLDGRVIKK*SHCWTT
Trigger: TGTAGTCCAACAGTGGCTTCACTTCTTGATGACTCT...ACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp TACTCCCCAATGAAGGTGCCACCGTTGTTTCTGAGGTGGAGAGAGAACTTGGATAGAGTCATCAAGAAGTaGAGCCACTGTTGGACTACA +
Preference number: 4 (lower is better)
Translates to: YSPMKVPPLFLRWRENLDRVIKK*SHCWTT
Trigger: TGTAGTCCAACAGTGGCTTCACTTCTTGATGACTCT...ATCCAAGTTCTCTCTCCACCTCAGAAACAACGGTGGCACCTTCATTGGGGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp AAAAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGACTGACAGCCAGCAGTaGCATCAATGCATTTGCAGC +
Preference number: 4 (lower is better)
Translates to: KRHRKLSAAITSGELPQLTDSQQ*HQCICS
Trigger: GCTGCAAATGCATTGATGTCACTGCTGGCTGTCAGT...CAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp TGGGAAAGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACATCTGTGCTCTTCTACTaGCAGCCAGCAGTGACATCA +
Preference number: 4 (lower is better)
Translates to: WERRGSTLCREVARLQVTSVLFY*QPAVTS
Trigger: TGATGTCACTGCTGGCTGTCAGTAGAAGAGCACAGA...TGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCTTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp AGGTCAATGCTGTCATCATCAATCGTCCCTGAAGCAGGTATAACAGAATGGCCTTCTGTGCTCTTCTACTaGCAGCCAGCAGTGACATCA +
Preference number: 4 (lower is better)
Translates to: RSMLSSSIVPEAGITEWPSVLFY*QPAVTS
Trigger: TGATGTCACTGCTGGCTGTCAGTAGAAGAGCACAGA...AGGCCATTCTGTTATACCTGCTTCAGGGACGATTGATGATGACAGCATTGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581161.5
CDS-3UTR TCA 90 bp GCACCAGCTTTCCTCAGGAGCATGGCCAGAAGATTAAATAAATGTGTCCATGTGTCTGTGCTCTTCTACTaGCAGCCAGCAGTGACATCA +
Preference number: 4 (lower is better)
Translates to: APAFLRSMARRLNKCVHVSVLFY*QPAVTS
Trigger: TGATGTCACTGCTGGCTGTCAGTAGAAGAGCACAGA...CACATGGACACATTTATTTAATCTTCTGGCCATGCTCCTGAGGAAAGCTGGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR TCA 90 bp AAAAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGAAGACAGGGACAAGGTaGGCTTCAAGAGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: KRHRKLSAAITSGELPQLKTGTR*ASRAAS
Trigger: AGAAGCAGCTCTTGAAGCTCACCTTGTCCCTGTCTT...CAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp AGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTACCTCTATGTGTAGCTTaGACAGGGTGTTGTCCACAA +
Preference number: 4 (lower is better)
Translates to: RGSTSSGNSCYTQLASTLPLCVA*TGCCPQ
Trigger: TTGTGGACAACACCCTGTTCAAGCTACACATAGAGG...TAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp TGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCATAAAAACCATCTGCTaGACCGTGGTGTTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: CYTQLASTLAPLLMTVSFIKTIC*TVVFSS
Trigger: ACTGGAGAACACCACGGTTCAGCAGATGGTTTTTAT...GAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp TGGGAAGCCAACTTTAGGATACACAGCATCAGAGAGTTGCTCACGGCTCCTCTAATAAAAACCATCTGCTaGACCGTGGTGTTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: WEANFRIHSIRELLTAPLIKTIC*TVVFSS
Trigger: ACTGGAGAACACCACGGTTCAGCAGATGGTTTTTAT...TAGAGGAGCCGTGAGCAACTCTCTGATGCTGTGTATCCTAAAGTTGGCTTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGCGACAAGGCCAGGTTTaGAAGAAGCATAAAAACCAT +
Preference number: 4 (lower is better)
Translates to: GTESCQLLLLLESCHNWTRQGQV*KKHKNH
Trigger: ATGGTTTTTATGCTTCTTTCAAACCTGGCCTTGTCG...CGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GGCCATAGAAATGAGGCGCATCCGTCACTTTCAGACACTGGAGCAGTTTCAGAGCGACAAGGCCAGGTTTaGAAGAAGCATAAAAACCAT +
Preference number: 4 (lower is better)
Translates to: GHRNEAHPSLSDTGAVSERQGQV*KKHKNH
Trigger: ATGGTTTTTATGCTTCTTTCAAACCTGGCCTTGTCG...CTCTGAAACTGCTCCAGTGTCTGAAAGTGACGGATGCGCCTCATTTCTATGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR TCA 90 bp ACAGAAAGGAATTGCAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGACAAGCGACAAGGCCAGGTTTaGAAGAAGCATAAAAACCAT +
Preference number: 4 (lower is better)
Translates to: TERNCKLAVYRAGHVADKRQGQV*KKHKNH
Trigger: ATGGTTTTTATGCTTCTTTCAAACCTGGCCTTGTCG...CTTGTCTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAATTCCTTTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCACATGATGTTTTGGGCTaGGCTAAATTTGAACCCAGG +
Preference number: 4 (lower is better)
Translates to: AGFNFSSPVDDCQLQGVAHDVLG*AKFEPR
Trigger: CCTGGGTTCAAATTTAGCTCAGCCCAAAACATCATG...TGCTACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578780.2
ENST00000639487.1
ENST00000640769.2
CDS-3UTR GCA 90 bp GCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGCCATCAATTTCAGCCTaGAGATTTGGCTCCACATTA +
Preference number: 4 (lower is better)
Translates to: AQKVVSCYYFWRAATTGRPSISA*RFGSTL
Trigger: TAATGTGGAGCCAAATCTGCAGGCTGAAATTGATGG...CCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255674.11
ENST00000640769.2
CDS-3UTR GCA 90 bp ACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGAAAGTCCATCCAGAATaGCATCAATTTCAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: TSSGNSCYTQLASTLAPLKVHPE*HQFQPA
Trigger: TGCAGGCTGAAATTGATGGCATTCTGGATGGACTTT...CAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000640769.2
CDS-3UTR GCA 90 bp GCAGGCCATAGAAATGAGGCGCATCCGTCACTTTCAGACACTGGAGCAGTTTCAAAAGTCCATCCAGAATaGCATCAATTTCAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: AGHRNEAHPSLSDTGAVSKVHPE*HQFQPA
Trigger: TGCAGGCTGAAATTGATGGCATTCTGGATGGACTTT...TGAAACTGCTCCAGTGTCTGAAAGTGACGGATGCGCCTCATTTCTATGGCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR GCA 90 bp GTGCCTGTGACTCTGTCAGAACCAAGAGGTCTAACAGTGGGTTTGCACTATGTCTGTTTCTTAAATACATaGACAGCTGCTGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: VPVTLSEPRGLTVGLHYVCFLNT*TAAAGR
Trigger: CCTGCCTGCAGCAGCTGTGCATGTATTTAAGAAACA...GACATAGTGCAAACCCACTGTTAGACCTCTTGGTTCTGACAGAGTCACAGGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR GCA 90 bp CACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGTTGTTTCTTAAATACATaGACAGCTGCTGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: HRKLSAAITSGELPQLDGCFLNT*TAAAGR
Trigger: CCTGCCTGCAGCAGCTGTGCATGTATTTAAGAAACA...ACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR GCA 90 bp AGTTACTCTTCTGAATTACTCCTTTACAGTCATGCGACAAGGCCAGGTTTGAAAAAGGCCGAGGGCTGCTaGTTCCTGGGGAAGGATTCT +
Preference number: 4 (lower is better)
Translates to: SYSSELLLYSHATRPGLKKAEGC*FLGKDS
Trigger: AGAATCCTTCCCCAGGAAGCAGCAGCCCTCGGCCTT...TTTCAAACCTGGCCTTGTCGCATGACTGTAAAGGAGTAATTCAGAAGAGTAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581161.5
CDS-3UTR GCA 90 bp TGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAATGGGGAAGACTGAGCTaGTGGAATTGTAGTTCCAAT +
Preference number: 4 (lower is better)
Translates to: CREVARLQVTAATHSWLQWGRLS*WNCSSN
Trigger: ATTGGAACTACAATTCCAGCAGCTCAGTCTTCCCCA...TTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR GCA 90 bp TACTCCCCAATGAAGGTGCCACCGTTGTTTCTGAGGTGGAGAGAGAACTTGGATTGGGGAAGACTGAGCTaGTGGAATTGTAGTTCCAAT +
Preference number: 4 (lower is better)
Translates to: YSPMKVPPLFLRWRENLDWGRLS*WNCSSN
Trigger: ATTGGAACTACAATTCCAGCAGCTCAGTCTTCCCCA...ATCCAAGTTCTCTCTCCACCTCAGAAACAACGGTGGCACCTTCATTGGGGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR GCA 90 bp CTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGCTATACCAAAAAGGCTaGTGTCATCCCAGATATCTG +
Preference number: 4 (lower is better)
Translates to: LPQLDGVGVSPVLSLMGKLYQKG*CHPRYL
Trigger: CAGATATCTGGGATGACAGCAGCCTTTTTGGTATAG...CTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR GCA 90 bp AAGGCCAGAGAGAGTGCAAGACAGGGACAAGGTGAGCTTCAAGAGCTGCTTCTTTGCTTAGAAGGAGAATaGAGTTACCCAGAGGATCTT +
Preference number: 4 (lower is better)
Translates to: KARESARQGQGELQELLLCLEGE*SYPEDL
Trigger: AAGATCCTCTGGGTAACTGCATTCTCCTTCTAAGCA...AAGAAGCAGCTCTTGAAGCTCACCTTGTCCCTGTCTTGCACTCTCTCTGGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR GCA 90 bp GGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGTGTCAGAACTTGCTTTaGTTAGAAGGAGAATGCAGT +
Preference number: 4 (lower is better)
Translates to: GELPQLDGVGVSPVLSLMCQNLL*LEGECS
Trigger: ACTGCATTCTCCTTCTAAGCAAAGCAAGTTCTGACA...CATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
CDS-3UTR GCA 90 bp TGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAAAGAGAAGACTGTTaGGAGAGCGAAACACGCATG +
Preference number: 4 (lower is better)
Translates to: CYTQLASTLAPLLMTVSFKREDC*ESETRM
Trigger: CATGCGTGTTTCGCTCTCGCAACAGTCTTCTCTTTT...GAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
CDS-3UTR GCA 90 bp ACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGGTTGTCCAAGAGGCTaGACATTGCTGAAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: TAGFNFSSPVDDCQLQGVGCPRG*TLLKEE
Trigger: CTCTTCTTTCAGCAATGTGCAGCCTCTTGGACAACC...TACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGTTGTCGAAAAGCCTTTaGAGTGTCTCTGGGAGCAAT +
Preference number: 4 (lower is better)
Translates to: SSGNSCYTQLASTLAPLLLSKSL*SVSGSN
Trigger: ATTGCTCCCAGAGACACTGCAAAGGCTTTTCGACAA...CAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TGGTGTTCTCCAGTGGCATCTGGGAAGCCAACTTTAGGATACACAGCATCAGAGTTGTCGAAAAGCCTTTaGAGTGTCTCTGGGAGCAAT +
Preference number: 4 (lower is better)
Translates to: WCSPVASGKPTLGYTASELSKSL*SVSGSN
Trigger: ATTGCTCCCAGAGACACTGCAAAGGCTTTTCGACAA...CTCTGATGCTGTGTATCCTAAAGTTGGCTTCCCAGATGCCACTGGAGAACACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp AGAGAACAGAAAGGAATTGCAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGTATGAGGGTAGCATCTaGAATGCTACAGAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: REQKGIASWQYTGQDTWQYEGSI*NATEKF
Trigger: GAACTTCTCTGTAGCATTGCAGATGCTACCCTCATA...CTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAATTCCTTTCTGTTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp AGTATACAGGGCAGGACACGTGGCAGACAAGCCTGCACATGTGCAGAACATATCTATGAGGGTAGCATCTaGAATGCTACAGAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: SIQGRTRGRQACTCAEHIYEGSI*NATEKF
Trigger: GAACTTCTCTGTAGCATTGCAGATGCTACCCTCATA...GATATGTTCTGCACATGTGCAGGCTTGTCTGCCACGTGTCCTGCCCTGTATACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp AAATGTTCTGACAACTGTTTGCTAAGGCCACACAGCCCGTTTCAAGGGTGGTCAACAAGCCTGCACATGTaGAGAACATATCAATCGCCG +
Preference number: 4 (lower is better)
Translates to: KCSDNCLLRPHSPFQGWSTSLHM*RTYQSP
Trigger: CGGCGATTGATATGTTCTGCACATGTGCAGGCTTGT...TGACCACCCTTGAAACGGGCTGTGTGGCCTTAGCAAACAGTTGTCAGAACATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR GCA 90 bp CTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAACTGGAGATGCCCTTTTaGTTCTTCGGTCAAGAGAAC +
Preference number: 4 (lower is better)
Translates to: LHTAGFNFSSPVDDCQLQLEMPF*FFGQEN
Trigger: GTTCTCTTGACCGAAGAAGCAAAAGGGCATCTCCAG...TTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp ACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTACTGGAGATGCCCTTTTaGTTCTTCGGTCAAGAGAAC +
Preference number: 4 (lower is better)
Translates to: TAGFNFSSPVDDCQLQGVLEMPF*FFGQEN
Trigger: GTTCTCTTGACCGAAGAAGCAAAAGGGCATCTCCAG...TACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TCTTCTCGTGCCTGTGACTCTGTCAGAACCAAGAGGTCTAACAGTGGGTTTGCACAAAGCATGTTTCTGTaGTCTTCTACTGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: SSRACDSVRTKRSNSGFAQSMFL*SSTDSQ
Trigger: CTGGCTGTCAGTAGAAGAGCACAGAAACATGCTTTG...TGCAAACCCACTGTTAGACCTCTTGGTTCTGACAGAGTCACAGGCACGAGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR GCA 90 bp CACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGGCAAAGCATGTTTCTGTaGTCTTCTACTGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: HNWTVLEYHQFSLSWERRQSMFL*SSTDSQ
Trigger: CTGGCTGTCAGTAGAAGAGCACAGAAACATGCTTTG...CCTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp AGTATACAGGGCAGGACACGTGGCAGACAAGCCTGCACATGTGCAGAACATATCCAGTTTCTTAGGAGCTaGATGGCAATGCTTAACTCT +
Preference number: 4 (lower is better)
Translates to: SIQGRTRGRQACTCAEHIQFLRS*MAMLNS
Trigger: AGAGTTAAGCATTGCCATGCAGCTCCTAAGAAACTG...GATATGTTCTGCACATGTGCAGGCTTGTCTGCCACGTGTCCTGCCCTGTATACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp AGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGGTGAGCTTCAAGAGCTaGTTCTTTACATTCCTCATT +
Preference number: 4 (lower is better)
Translates to: RAATTGRCWSITSSLSHGVSFKS*FFTFLI
Trigger: AATGAGGAATGTAAAGAAGCAGCTCTTGAAGCTCAC...CCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TGGGAAAGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACAACAGCATCAGAGAGTTaGTCACGGCTCCTCTATGTG +
Preference number: 4 (lower is better)
Translates to: WERRGSTLCREVARLQVTTASES*SRLLYV
Trigger: CACATAGAGGAGCCGTGAGCAACTCTCTGATGCTGT...TGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCTTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp GCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCAACTCCTTTACAGTCATaGGACAAGGCCAGGTTTGAA +
Preference number: 4 (lower is better)
Translates to: AGFNFSSPVDDCQLQGVATPLQS*DKARFE
Trigger: TTCAAACCTGGCCTTGTCGCATGACTGTAAAGGAGT...TGCTACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp AGCAATCAGTTCTTTCTGAAGTTGTTGCCTGACAGCAGTCCGGATATCATCTGTAGCCCAAAGGGCAGCTaGTCCAATCCTCTGAGCATT +
Preference number: 4 (lower is better)
Translates to: SNQFFLKLLPDSSPDIICSPKGS*SNPLSI
Trigger: AATGCTCAGAGGATTGGAGCAGCTGCCCTTTGGGCT...ACAGATGATATCCGGACTGCTGTCAGGCAACAACTTCAGAAAGAACTGATTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR GCA 90 bp CTTTCCAGACAGGCAGCAAGCACAGTAATGACTTTTTCATTAGCCAGGATCTTGAGCCCAAAGGGCAGCTaGTCCAATCCTCTGAGCATT +
Preference number: 4 (lower is better)
Translates to: LSRQAASTVMTFSLARILSPKGS*SNPLSI
Trigger: AATGCTCAGAGGATTGGAGCAGCTGCCCTTTGGGCT...CAAGATCCTGGCTAATGAAAAAGTCATTACTGTGCTTGCTGCCTGTCTGGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TTCTGGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCAGAAAGTTGTCAGCTaGTATTACTTCTGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: FWRAATTGRCWSITSSLSQKVVS*YYFWRA
Trigger: AGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTG...AGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp ACAAACGGGAGTGTGATGGCACCAGCTTTCCTCAGGAGCATGGCCAGAAGATTACAGAAAGTTGTCAGCTaGTATTACTTCTGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: TNGSVMAPAFLRSMARRLQKVVS*YYFWRA
Trigger: AGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTG...TAATCTTCTGGCCATGCTCCTGAGGAAAGCTGGTGCCATCACACTCCCGTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp AGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCAGAAAGTTGTCAGCTaGTATTACTTCTGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: STSSGNSCYTQLASTLAPQKVVS*YYFWRA
Trigger: AGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTG...GGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp CTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGGATTTCACCAAGTTaGCCAAGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: LHTAGFNFSSPVDDCQLQGISPS*PSWSQT
Trigger: AGTTTGAGACCAGCTTGGGCAACTTGGTGAAATCCC...TTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578780.2
ENST00000639487.1
ENST00000640769.2
CDS-3UTR GCA 90 bp AAAAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGTTGAAGAGATTCTCGTaGCTCAGCCACTGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: KRHRKLSAAITSGELPQLLKRFS*LSHWSS
Trigger: GCTACTCCAGTGGCTGAGGCACGAGAATCTCTTCAA...CAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578780.2
ENST00000639487.1
ENST00000640769.2
CDS-3UTR CCA 90 bp TTCTGGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCAAATGTTGGACTGCTaGGGGATACTTAACCAATCT +
Preference number: 4 (lower is better)
Translates to: FWRAATTGRCWSITSSLSQMLDC*GILNQS
Trigger: AGATTGGTTAAGTATCCCCCAGCAGTCCAACATTTG...AGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255674.11
ENST00000640769.2
CDS-3UTR CCA 90 bp AGCAATCAGTTCTTTCTGAAGTTGTTGCCTGACAGCAGTCCGGATATCATCTGTATTTACCACTGGTCGTaGCGGCACTTCCATCTGCTG +
Preference number: 4 (lower is better)
Translates to: SNQFFLKLLPDSSPDIICIYHWS*RHFHLL
Trigger: CAGCAGATGGAAGTGCCGCCACGACCAGTGGTAAAT...ACAGATGATATCCGGACTGCTGTCAGGCAACAACTTCAGAAAGAACTGATTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR CCA 90 bp CAGCCAGCAGTGACATCAATGCATTTGCAGCTACTCTTTTCAGGATATCTTTGGCATGTCTGTCTGTGGTaGTCAGGGGTAGCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: QPAVTSMHLQLLFSGYLWHVCLW*SGVAKE
Trigger: TTCCTTGGCTACCCCTGACCACCACAGACAGACATG...CCAAAGATATCCTGAAAAGAGTAGCTGCAAATGCATTGATGTCACTGCTGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581161.5
CDS-3UTR CCA 90 bp GGTGAAGATTTCATATACCTTTTCAACAGTCTCCAACTTAATAACCAGCTCTCTTCTCCTCTGGGTCGCTaGCCTGTGCGCCCAACCACA +
Preference number: 4 (lower is better)
Translates to: GEDFIYLFNSLQLNNQLSSPLGR*PVRPTT
Trigger: TGTGGTTGGGCGCACAGGCCAGCGACCCAGAGGAGA...AGAGAGCTGGTTATTAAGTTGGAGACTGTTGAAAAGGTATATGAAATCTTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR CCA 90 bp GTACATATGGTGAGAATTCCAATGATATTGGTGATAAGAGGTTTCACAAGCTCAGCTGCATCCCAGTCCTaGCCATCTCCTCTGGGTCGC +
Preference number: 4 (lower is better)
Translates to: VHMVRIPMILVIRGFTSSAASQS*PSPLGR
Trigger: GCGACCCAGAGGAGATGGCCAGGACTGGGATGCAGC...TGAGCTTGTGAAACCTCTTATCACCAATATCATTGGAATTCTCACCATATGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CCA 90 bp GAAGAATGTTCACCACAGTTCCCCAGAGCCCACCGGAAATGTTCTGACAACTGTTTCAGTTTCCAGCTCTaGCAGATCTATGTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: EECSPQFPRAHRKCSDNCFSFQL*QIYVSH
Trigger: ATGGGACACATAGATCTGCCAGAGCTGGAAACTGAA...ACAGTTGTCAGAACATTTCCGGTGGGCTCTGGGGAACTGTGGTGAACATTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CCA 90 bp CCATCAAAATCCAAGGCCAGAGAGAGTGCAAGACAGGGACAAGGTGAGCTTCAAGGAAGACTGAGCTGCTaGAATTGTAGTTCCAATGTG +
Preference number: 4 (lower is better)
Translates to: PSKSKARESARQGQGELQGRLSC*NCSSNV
Trigger: CACATTGGAACTACAATTCCAGCAGCTCAGTCTTCC...TTGAAGCTCACCTTGTCCCTGTCTTGCACTCTCTCTGGCCTTGGATTTTGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CCA 90 bp ACAGAATGGCCTTGGCAGCAGTGTTCACCTGCTCAACAACACAGACCCGATAAACAGCTGATTCCAGAATaGAGACACAAAACTGGGGAA +
Preference number: 4 (lower is better)
Translates to: TEWPWQQCSPAQQHRPDKQLIPE*RHKTGE
Trigger: TTCCCCAGTTTTGTGTCTCCATTCTGGAATCAGCTG...TTTATCGGGTCTGTGTTGTTGAGCAGGTGAACACTGCTGCCAAGGCCATTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638251.1
CDS-3UTR CCA 90 bp AAGGACTTCAAGGTAACCCCACATGGACCAGGGCAACCCTTTAAAGACAATCTGCACAAGCATCACCTCTaGCTGCTCCAAACTGATACT +
Preference number: 4 (lower is better)
Translates to: KDFKVTPHGPGQPFKDNLHKHHL*LLQTDT
Trigger: AGTATCAGTTTGGAGCAGCCAGAGGTGATGCTTGTG...CAGATTGTCTTTAAAGGGTTGCCCTGGTCCATGTGGGGTTACCTTGAAGTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CCA 90 bp AGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTACACAAGCATCACCTCTaGCTGCTCCAAACTGATACT +
Preference number: 4 (lower is better)
Translates to: RGSTSSGNSCYTQLASTLHKHHL*LLQTDT
Trigger: AGTATCAGTTTGGAGCAGCCAGAGGTGATGCTTGTG...TAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CCA 90 bp CCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGATAAAGGCCATTCTGTaGTGCACAAGCATCACCTCT +
Preference number: 4 (lower is better)
Translates to: PQLDGVGVSPVLSLMGKKIKAIL*CTSITS
Trigger: AGAGGTGATGCTTGTGCACCACAGAATGGCCTTTAT...CTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CCA 90 bp CATCCTGAATCACAAGGTCAGGCTCCACCAATAAACATGACTGCAGAAGCCTGGCTTGTAGTAATGGACTaGCCTGAGCAGATTTCCAGA +
Preference number: 4 (lower is better)
Translates to: HPESQGQAPPINMTAEAWLVVMD*PEQISR
Trigger: TCTGGAAATCTGCTCAGGCCAGTCCATTACTACAAG...CCAGGCTTCTGCAGTCATGTTTATTGGTGGAGCCTGACCTTGTGATTCAGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CCA 90 bp CTTCTACTGACAGCCAGCAGTGACATCAATGCATTTGCAGCTACTCTTTTCAGGCTCTGGAGAGAACTCTaGCGTCTATTAGAGGACGCT +
Preference number: 4 (lower is better)
Translates to: LLLTASSDINAFAATLFRLWREL*RLLEDA
Trigger: AGCGTCCTCTAATAGACGCCAGAGTTCTCTCCAGAG...CCTGAAAAGAGTAGCTGCAAATGCATTGATGTCACTGCTGGCTGTCAGTAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CCA 90 bp AAAAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGCTCTGGAGAGAACTCTaGCGTCTATTAGAGGACGCT +
Preference number: 4 (lower is better)
Translates to: KRHRKLSAAITSGELPQLLWREL*RLLEDA
Trigger: AGCGTCCTCTAATAGACGCCAGAGTTCTCTCCAGAG...CAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
CDS-3UTR CCA 90 bp AGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCAAGAGTGTGAGGCATaGTTGTACCAAACATTCTAC +
Preference number: 4 (lower is better)
Translates to: STSSGNSCYTQLASTLAPQECEA*LYQTFY
Trigger: GTAGAATGTTTGGTACAACCATGCCTCACACTCTTG...GGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
CDS-3UTR CCA 90 bp CTTCTACTGACAGCCAGCAGTGACATCAATGCATTTGCAGCTACTCTTTTCAGGTTGCAGCCTGAACAATaGAATGGAGGCAGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LLLTASSDINAFAATLFRLQPEQ*NGGSPA
Trigger: TGCAGGACTGCCTCCATTCCATTGTTCAGGCTGCAA...CCTGAAAAGAGTAGCTGCAAATGCATTGATGTCACTGCTGGCTGTCAGTAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CCA 90 bp AAAAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGAGCCCGTTTCAAGGGTaGTCAGTGCTGATCCTAATC +
Preference number: 4 (lower is better)
Translates to: KRHRKLSAAITSGELPQLSPFQG*SVLILI
Trigger: GATTAGGATCAGCACTGACCACCCTTGAAACGGGCT...CAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp TGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCCTGACTTGTCCTAGATaGAGCCCTCCAAAACTTGAA +
Preference number: 4 (lower is better)
Translates to: CYTQLASTLAPLLMTVSFLTCPR*SPPKLE
Trigger: TTCAAGTTTTGGAGGGCTCCATCTAGGACAAGTCAG...GAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp TGGAGTAAGGACTCACAGCATGGTGTCCAATTACATGAACAGGTAGATGGTACCCCTTTGCAGTGTCTCTaGGAGCAATCGTCAAGAGGT +
Preference number: 4 (lower is better)
Translates to: WSKDSQHGVQLHEQVDGTPLQCL*EQSSRG
Trigger: ACCTCTTGACGATTGCTCCCAGAGACACTGCAAAGG...GGTACCATCTACCTGTTCATGTAATTGGACACCATGCTGTGAGTCCTTACTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CCA 90 bp TGTGCTCTTCTACTGACAGCCAGCAGTGACATCAATGCATTTGCAGCTACTCTTAGGGCTCTGAGTTCCTaGACACATGTCTGTATGAGG +
Preference number: 4 (lower is better)
Translates to: CALLLTASSDINAFAATLRALSS*THVCMR
Trigger: CCTCATACAGACATGTGTCCAGGAACTCAGAGCCCT...AAGAGTAGCTGCAAATGCATTGATGTCACTGCTGGCTGTCAGTAGAAGAGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CCA 90 bp CTTCTACTGACAGCCAGCAGTGACATCAATGCATTTGCAGCTACTCTTTTCAGGAGGGCTCTGAGTTCCTaGACACATGTCTGTATGAGG +
Preference number: 4 (lower is better)
Translates to: LLLTASSDINAFAATLFRRALSS*THVCMR
Trigger: CCTCATACAGACATGTGTCCAGGAACTCAGAGCCCT...CCTGAAAAGAGTAGCTGCAAATGCATTGATGTCACTGCTGGCTGTCAGTAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CCA 90 bp GGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGATGACTGCAGAAGCCTaGACAAAGAGGATAGGTATT +
Preference number: 4 (lower is better)
Translates to: GTESCQLLLLLESCHNWTMTAEA*TKRIGI
Trigger: AATACCTATCCTCTTTGTCCAGGCTTCTGCAGTCAT...CGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp AAGCATAAAAACCATCTGCTGAACCGTGGTGTTCTCCAGTGGCATCTGGGAAGCGTTTTGCTCTTAGCCTaGAGATGCCCTTTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: KHKNHLLNRGVLQWHLGSVLLLA*RCPFAS
Trigger: AGAAGCAAAAGGGCATCTCCAGGCTAAGAGCAAAAC...GCTTCCCAGATGCCACTGGAGAACACCACGGTTCAGCAGATGGTTTTTATGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CCA 90 bp CCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGGTTTTGCTCTTAGCCTaGAGATGCCCTTTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: PQLDGVGVSPVLSLMGKKVLLLA*RCPFAS
Trigger: AGAAGCAAAAGGGCATCTCCAGGCTAAGAGCAAAAC...CTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp TCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGTTCTCCAGTGGCATCTaGGAAGCCAACTTTAGGATA +
Preference number: 4 (lower is better)
Translates to: SGNSCYTQLASTLAPLLMFSSGI*EANFRI
Trigger: TATCCTAAAGTTGGCTTCCCAGATGCCACTGGAGAA...CATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp CCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGAGGTGTAGCATCCCATaGCACTCAGGAAGAATTAAG +
Preference number: 4 (lower is better)
Translates to: PQLDGVGVSPVLSLMGKKRCSIP*HSGRIK
Trigger: CTTAATTCTTCCTGAGTGCCATGGGATGCTACACCT...CTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp GGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCATCCAGGTGTAGCATCCCATaGCACTCAGGAAGAATTAAG +
Preference number: 4 (lower is better)
Translates to: GFNFSSPVDDCQLQGVASRCSIP*HSGRIK
Trigger: CTTAATTCTTCCTGAGTGCCATGGGATGCTACACCT...GGATGCTACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp CACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGGAGGTGTAGCATCCCATaGCACTCAGGAAGAATTAAG +
Preference number: 4 (lower is better)
Translates to: HNWTVLEYHQFSLSWERRRCSIP*HSGRIK
Trigger: CTTAATTCTTCCTGAGTGCCATGGGATGCTACACCT...CCTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp TCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGCAGTTCTCTCTCTCATaGGAAAGAAGGGGATCAACA +
Preference number: 4 (lower is better)
Translates to: SSGNSCYTQLASTLAPLLQFSLS*ERRGST
Trigger: TGTTGATCCCCTTCTTTCCCATGAGAGAGAGAACTG...CAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp GTTTCTTCTCGTGCCTGTGACTCTGTCAGAACCAAGAGGTCTAACAGTGGGTTTACAACTGGACGGTGTTaGAGTATCACCAGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: VSSRACDSVRTKRSNSGFTTGRC*SITSSL
Trigger: GAGAGAACTGGTGATACTCCAACACCGTCCAGTTGT...AAACCCACTGTTAGACCTCTTGGTTCTGACAGAGTCACAGGCACGAGAAGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CCA 90 bp AGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAAGCTGCTATTACTTCTaGAGAGCTGCCACAACTGGA +
Preference number: 4 (lower is better)
Translates to: RGSTSSGNSCYTQLASTLSCYYF*RAATTG
Trigger: TCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCT...TAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp TGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAAAGCCCTTTTCCAGTGTaGATGCTCTGGATAACAGAA +
Preference number: 4 (lower is better)
Translates to: CREVARLQVTAATHSWLQSPFPV*MLWITE
Trigger: TTCTGTTATCCAGAGCATCCACACTGGAAAAGGGCT...TTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578780.2
ENST00000639487.1
ENST00000640769.2
CDS-3UTR TCA 90 bp TTCTGGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTAAACCTGGATCTCGGTaGAAGTTAAGTCTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: FWRAATTGRCWSITSSLSKPGSR*KLSLFL
Trigger: AAGAAACAGACTTAACTTTCACCGAGATCCAGGTTT...AGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR TCA 90 bp AGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCAAACCTGGATCTCGGTaGAAGTTAAGTCTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: STSSGNSCYTQLASTLAPKPGSR*KLSLFL
Trigger: AAGAAACAGACTTAACTTTCACCGAGATCCAGGTTT...GGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR TCA 90 bp AAGGCCAGAGAGAGTGCAAGACAGGGACAAGGTGAGCTTCAAGAGCTGCTTCTTATATCCAAAGGTGAATaGACGGATATCCTGGAGTTT +
Preference number: 4 (lower is better)
Translates to: KARESARQGQGELQELLLISKGE*TDILEF
Trigger: AAACTCCAGGATATCCGTTCATTCACCTTTGGATAT...AAGAAGCAGCTCTTGAAGCTCACCTTGTCCCTGTCTTGCACTCTCTCTGGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR TCA 90 bp AAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGATCCCATATCCAAAGGTaGATGAACGGATATCCTGGA +
Preference number: 4 (lower is better)
Translates to: KAQKVVSCYYFWRAATTGSHIQR*MNGYPG
Trigger: TCCAGGATATCCGTTCATTCACCTTTGGATATGGGA...TCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR TCA 90 bp AAGGACTTCAAGGTAACCCCACATGGACCAGGGCAACCCTTTAAAGACAATCTGCTGGCTGCTCCAAACTaGTACTACTTTTATGGTAGC +
Preference number: 4 (lower is better)
Translates to: KDFKVTPHGPGQPFKDNLLAAPN*YYFYGS
Trigger: GCTACCATAAAAGTAGTATCAGTTTGGAGCAGCCAG...CAGATTGTCTTTAAAGGGTTGCCCTGGTCCATGTGGGGTTACCTTGAAGTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp CTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAACAGGTGCATTCAATTaGATAAACGGCCTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: LHTAGFNFSSPVDDCQLQTGAFN*INGLCS
Trigger: ACTGCAGAGGCCGTTTATTCAATTGAATGCACCTGT...TTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR TCA 90 bp CTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAAGTAATGGACTGGCCTaGGCAGATTTCCAGATCTTT +
Preference number: 4 (lower is better)
Translates to: LHTAGFNFSSPVDDCQLQSNGLA*ADFQIF
Trigger: AAAGATCTGGAAATCTGCTCAGGCCAGTCCATTACT...TTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR TCA 90 bp ACTCTGGCGTCTATTAGAGGACGCTTTGTATCAGCCCCTTCTTCACTGGTAAGACTAAACATTCCTTCGTaGTTTCCAGACAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: TLASIRGRFVSAPSSLVRLNIPS*FPDSSG
Trigger: ACCACTGCTGTCTGGAAATCACGAAGGAATGTTTAG...TCTTACCAGTGAAGAAGGGGCTGATACAAAGCGTCCTCTAATAGACGCCAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR TCA 90 bp GTGCCTGTGACTCTGTCAGAACCAAGAGGTCTAACAGTGGGTTTGCACTATGTCAATTCCATTGCAAAGTaGAGACACGGGTTTAGTGAC +
Preference number: 4 (lower is better)
Translates to: VPVTLSEPRGLTVGLHYVNSIAK*RHGFSD
Trigger: GTCACTAAACCCGTGTCTTCACTTTGCAATGGAATT...GACATAGTGCAAACCCACTGTTAGACCTCTTGGTTCTGACAGAGTCACAGGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp TCTGTTTCTTCTCGTGCCTGTGACTCTGTCAGAACCAAGAGGTCTAACAGTGGGTCACTTTCGGGCTCTTaGATGCCAAATACAGAGATT +
Preference number: 4 (lower is better)
Translates to: SVSSRACDSVRTKRSNSGSLSGS*MPNTEI
Trigger: AATCTCTGTATTTGGCATTCAAGAGCCCGAAAGTGA...CCCACTGTTAGACCTCTTGGTTCTGACAGAGTCACAGGCACGAGAAGAAACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp GACAGGTTCCAAGCTATTCTCAGCATATCTGACACCGGCTTCAAGGCCAAACAACCTGTAGTATTGGGATaGCAGGACAGAGAGATTCAA +
Preference number: 4 (lower is better)
Translates to: DRFQAILSISDTGFKAKQPVVLG*QDREIQ
Trigger: TTGAATCTCTCTGTCCTGTCATCCCAATACTACAGG...TTGTTTGGCCTTGAAGCCGGTGTCAGATATGCTGAGAATAGCTTGGAACCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp AGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTACCTGTAGTATTGGGATaGCAGGACAGAGAGATTCAA +
Preference number: 4 (lower is better)
Translates to: RGSTSSGNSCYTQLASTLPVVLG*QDREIQ
Trigger: TTGAATCTCTCTGTCCTGTCATCCCAATACTACAGG...TAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR TCA 90 bp AAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGAAGAGCGAAACACGCATaGCTGGATCACCACATAAAA +
Preference number: 4 (lower is better)
Translates to: KAQKVVSCYYFWRAATTGRAKHA*LDHHIK
Trigger: TTTTATGTGGTGATCCAGTCATGCGTGTTTCGCTCT...TCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
CDS-3UTR TCA 90 bp TCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGTGGTGTCCAATTACATaGACAGGTAGATGGTACCTT +
Preference number: 4 (lower is better)
Translates to: SGNSCYTQLASTLAPLLMWCPIT*TGRWYL
Trigger: AAGGTACCATCTACCTGTTCATGTAATTGGACACCA...CATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000679113.1
CDS-3UTR TCA 90 bp ACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAACTCCCATGATACCATaGCAGGTTCCAAGCTATTCT +
Preference number: 4 (lower is better)
Translates to: TAGFNFSSPVDDCQLQGVTPMIP*QVPSYS
Trigger: AGAATAGCTTGGAACCTGTCATGGTATCATGGGAGT...TACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000679113.1
CDS-3UTR TCA 90 bp AAATGTTCTGACAACTGTTTGCTAAGGCCACACAGCCCGTTTCAAGGGTGGTCAACTCCCATGATACCATaGCAGGTTCCAAGCTATTCT +
Preference number: 4 (lower is better)
Translates to: KCSDNCLLRPHSPFQGWSTPMIP*QVPSYS
Trigger: AGAATAGCTTGGAACCTGTCATGGTATCATGGGAGT...TGACCACCCTTGAAACGGGCTGTGTGGCCTTAGCAAACAGTTGTCAGAACATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp CACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGTAGATTATCACTCCCATaGTACCATGACAGGTTCCAA +
Preference number: 4 (lower is better)
Translates to: HRKLSAAITSGELPQLDGRLSLP*YHDRFQ
Trigger: TTGGAACCTGTCATGGTATCATGGGAGTGATAATCT...ACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
ENST00000679113.1
CDS-3UTR TCA 90 bp TCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGAGATTATCACTCCCATaGTACCATGACAGGTTCCAA +
Preference number: 4 (lower is better)
Translates to: SGNSCYTQLASTLAPLLMRLSLP*YHDRFQ
Trigger: TTGGAACCTGTCATGGTATCATGGGAGTGATAATCT...CATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000679113.1
CDS-3UTR TCA 90 bp TATGAGGGTAGCATCTGCAATGCTACAGAGAAGTTCTATGAGATGAGCTTGTCGTTCTTCTCGTGCCTGTaGCTCTGTCAGAACCAAGAG +
Preference number: 4 (lower is better)
Translates to: YEGSICNATEKFYEMSLSFFSCL*LCQNQE
Trigger: CTCTTGGTTCTGACAGAGTCACAGGCACGAGAAGAA...CGACAAGCTCATCTCATAGAACTTCTCTGTAGCATTGCAGATGCTACCCTCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp AAAAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGTCTGAAGTTGTTGCCTaGCAGCAGTCCGGATATCAT +
Preference number: 4 (lower is better)
Translates to: KRHRKLSAAITSGELPQLSEVVA*QQSGYH
Trigger: ATGATATCCGGACTGCTGTCAGGCAACAACTTCAGA...CAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GTTTCTTCTCGTGCCTGTGACTCTGTCAGAACCAAGAGGTCTAACAGTGGGTTTGCAATCAGTTCTTTCTaGAGTTGTTGCCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: VSSRACDSVRTKRSNSGFAISSF*SCCLTA
Trigger: TGCTGTCAGGCAACAACTTCAGAAAGAACTGATTGC...AAACCCACTGTTAGACCTCTTGGTTCTGACAGAGTCACAGGCACGAGAAGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp AGCAATCAGTTCTTTCTGAAGTTGTTGCCTGACAGCAGTCCGGATATCATCTGTTATCTAGAGGCTTTGTaGGAGGAGAGTGTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: SNQFFLKLLPDSSPDIICYLEAL*EESVSS
Trigger: GGAGCTCACACTCTCCTCTCACAAAGCCTCTAGATA...ACAGATGATATCCGGACTGCTGTCAGGCAACAACTTCAGAAAGAACTGATTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp ACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGATCTCATGGGATAAGTaGAGCAAGCAAAGAATTGTG +
Preference number: 4 (lower is better)
Translates to: TSSGNSCYTQLASTLAPLISWDK*SKQRIV
Trigger: CACAATTCTTTGCTTGCTTCACTTATCCCATGAGAT...CAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp ACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGATATGTTCTTCACTATaGCTACCCAAAGGCAAGAAC +
Preference number: 4 (lower is better)
Translates to: TSSGNSCYTQLASTLAPLICSSL*LPKGKN
Trigger: GTTCTTGCCTTTGGGTAGTCATAGTGAAGAACATAT...CAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp AGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCATATGTTCTTCACTATaGCTACCCAAAGGCAAGAAC +
Preference number: 4 (lower is better)
Translates to: STSSGNSCYTQLASTLAPICSSL*LPKGKN
Trigger: GTTCTTGCCTTTGGGTAGTCATAGTGAAGAACATAT...GGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp TTCTGGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTATATGTTCTTCACTATaGCTACCCAAAGGCAAGAAC +
Preference number: 4 (lower is better)
Translates to: FWRAATTGRCWSITSSLSICSSL*LPKGKN
Trigger: GTTCTTGCCTTTGGGTAGTCATAGTGAAGAACATAT...AGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp AGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCAAGCCAATCCTTGTTaGGTAGGAATATGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: STSSGNSCYTQLASTLAPQANPC*VGICSS
Trigger: TGAAGAACATATTCCTACTCAACAAGGATTGGCTTG...GGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp ACAAACGGGAGTGTGATGGCACCAGCTTTCCTCAGGAGCATGGCCAGAAGATTACAAGCCAATCCTTGTTaGGTAGGAATATGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: TNGSVMAPAFLRSMARRLQANPC*VGICSS
Trigger: TGAAGAACATATTCCTACTCAACAAGGATTGGCTTG...TAATCTTCTGGCCATGCTCCTGAGGAAAGCTGGTGCCATCACACTCCCGTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp GTGCCTGTGACTCTGTCAGAACCAAGAGGTCTAACAGTGGGTTTGCACTATGTCCACCATACTACATTCTaGCTGGTCCAGAAGAATGTT +
Preference number: 4 (lower is better)
Translates to: VPVTLSEPRGLTVGLHYVHHTTF*LVQKNV
Trigger: AACATTCTTCTGGACCAGTCAGAATGTAGTATGGTG...GACATAGTGCAAACCCACTGTTAGACCTCTTGGTTCTGACAGAGTCACAGGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp AGCCTCAGAATCATTTGTTGCCCATCTTCTCCAGATGATATATTCAGGAGTAACCCAGAGTCCTCATCATaGACACAGGGACCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: SLRIICCPSSPDDIFRSNPESSS*TQGPCQ
Trigger: TTGGCAGGGTCCCTGTGTTCATGATGAGGACTCTGG...GTTACTCCTGAATATATCATCTGGAGAAGATGGGCAACAAATGATTCTGAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
CDS-3UTR TCA 90 bp CCCTTTACAAATAATGCACACTTACTTCTACATAGCCCTTTTCCAGTGTGGATGGGGCAGGTTTTCCAATaGGCGATAGGCCAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: PFTNNAHLLLHSPFPVWMGQVFQ*AIGQSP
Trigger: AGGACTCTGGCCTATCGCTCATTGGAAAACCTGCCC...CATCCACACTGGAAAAGGGCTATGTAGAAGTAAGTGTGCATTATTTGTAAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000640769.2
CDS-3UTR TCA 90 bp TCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGGAGCCCTCCAAAACTTaGATGAGTCATCTAAACCAT +
Preference number: 4 (lower is better)
Translates to: SGNSCYTQLASTLAPLLMEPSKT*MSHLNH
Trigger: ATGGTTTAGATGACTCATTCAAGTTTTGGAGGGCTC...CATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp TGGAGTAAGGACTCACAGCATGGTGTCCAATTACATGAACAGGTAGATGGTACCGACTGCACAAGTGGCTaGAATTCAGTACTCCCCAAT +
Preference number: 4 (lower is better)
Translates to: WSKDSQHGVQLHEQVDGTDCTSG*NSVLPN
Trigger: ATTGGGGAGTACTGAATTTCAGCCACTTGTGCAGTC...GGTACCATCTACCTGTTCATGTAATTGGACACCATGCTGTGAGTCCTTACTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp ACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGAGAAGTTCTATGAGATaGGCTTGTCGAAAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: TSSGNSCYTQLASTLAPLRSSMR*ACRKAF
Trigger: AAAGGCTTTTCGACAAGCTCATCTCATAGAACTTCT...CAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp ACAAACGGGAGTGTGATGGCACCAGCTTTCCTCAGGAGCATGGCCAGAAGATTATACAGAGAAGTTCTATaGGATGAGCTTGTCGAAAAG +
Preference number: 4 (lower is better)
Translates to: TNGSVMAPAFLRSMARRLYREVL*DELVEK
Trigger: CTTTTCGACAAGCTCATCTCATAGAACTTCTCTGTA...TAATCTTCTGGCCATGCTCCTGAGGAAAGCTGGTGCCATCACACTCCCGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR TCA 90 bp CTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGTACAGAGAAGTTCTATaGGATGAGCTTGTCGAAAAG +
Preference number: 4 (lower is better)
Translates to: LPQLDGVGVSPVLSLMGKYREVL*DELVEK
Trigger: CTTTTCGACAAGCTCATCTCATAGAACTTCTCTGTA...CTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp AGTTACTCTTCTGAATTACTCCTTTACAGTCATGCGACAAGGCCAGGTTTGAAAAAGGCAGCAGGGCTCTaGGTTCCTGGACACATGTCT +
Preference number: 4 (lower is better)
Translates to: SYSSELLLYSHATRPGLKKAAGL*VPGHMS
Trigger: AGACATGTGTCCAGGAACTCAGAGCCCTGCTGCCTT...TTTCAAACCTGGCCTTGTCGCATGACTGTAAAGGAGTAATTCAGAAGAGTAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000639487.1
CDS-3UTR TCA 90 bp CTTTCCAGACAGGCAGCAAGCACAGTAATGACTTTTTCATTAGCCAGGATCTTGTTCACAAGCTCATCCTaGATCACAAGGTCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: LSRQAASTVMTFSLARILFTSSS*ITRSGS
Trigger: GGAGCCTGACCTTGTGATTCAGGATGAGCTTGTGAA...CAAGATCCTGGCTAATGAAAAAGTCATTACTGTGCTTGCTGCCTGTCTGGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR TCA 90 bp TGCCTTCTGATAATTGTAAATCAGAGCCCAAAGGGCAGCTGCTCCAATCCTCTGAGAGTCATCAAGAAGTaGAGCCACTGTTGGACTACA +
Preference number: 4 (lower is better)
Translates to: CLLIIVNQSPKGSCSNPLRVIKK*SHCWTT
Trigger: TGTAGTCCAACAGTGGCTTCACTTCTTGATGACTCT...CAGAGGATTGGAGCAGCTGCCCTTTGGGCTCTGATTTACAATTATCAGAAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR TCA 90 bp CTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAAGAGTCATCAAGAAGTaGAGCCACTGTTGGACTACA +
Preference number: 4 (lower is better)
Translates to: LHTAGFNFSSPVDDCQLQRVIKK*SHCWTT
Trigger: TGTAGTCCAACAGTGGCTTCACTTCTTGATGACTCT...TTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp CTTTCCAGACAGGCAGCAAGCACAGTAATGACTTTTTCATTAGCCAGGATCTTGACTGACAGCCAGCAGTaGCATCAATGCATTTGCAGC +
Preference number: 4 (lower is better)
Translates to: LSRQAASTVMTFSLARILTDSQQ*HQCICS
Trigger: GCTGCAAATGCATTGATGTCACTGCTGGCTGTCAGT...CAAGATCCTGGCTAATGAAAAAGTCATTACTGTGCTTGCTGCCTGTCTGGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR TCA 90 bp AAGCTGTTTTTGCCTTCTGATAATTGTAAATCAGAGCCCAAAGGGCAGCTGCTCAAGACAGGGACAAGGTaGGCTTCAAGAGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: KLFLPSDNCKSEPKGQLLKTGTR*ASRAAS
Trigger: AGAAGCAGCTCTTGAAGCTCACCTTGTCCCTGTCTT...GAGCAGCTGCCCTTTGGGCTCTGATTTACAATTATCAGAAGGCAAAAACAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR TCA 90 bp CTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAATAAAAACCATCTGCTaGACCGTGGTGTTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: LHTAGFNFSSPVDDCQLQIKTIC*TVVFSS
Trigger: ACTGGAGAACACCACGGTTCAGCAGATGGTTTTTAT...TTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCATCCCGACAAGGCCAGGTTTaGAAGAAGCATAAAAACCAT +
Preference number: 4 (lower is better)
Translates to: GFNFSSPVDDCQLQGVASRQGQV*KKHKNH
Trigger: ATGGTTTTTATGCTTCTTTCAAACCTGGCCTTGTCG...GGATGCTACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp CAAGGTGTAGCATCCCATGGCACTCAGGAAGAATTAAGGAGCTGCACGAGGTTTCGACAAGGCCAGGTTTaGAAGAAGCATAAAAACCAT +
Preference number: 4 (lower is better)
Translates to: QGVASHGTQEELRSCTRFRQGQV*KKHKNH
Trigger: ATGGTTTTTATGCTTCTTTCAAACCTGGCCTTGTCG...AAACCTCGTGCAGCTCCTTAATTCTTCCTGAGTGCCATGGGATGCTACACCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR TCA 90 bp TCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGCGACAAGGCCAGGTTTaGAAGAAGCATAAAAACCAT +
Preference number: 4 (lower is better)
Translates to: SGNSCYTQLASTLAPLLMRQGQV*KKHKNH
Trigger: ATGGTTTTTATGCTTCTTTCAAACCTGGCCTTGTCG...CATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp GGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCATCCAACCAAATGTTGGACTaGTGGGGGATACTTAACCAA +
Preference number: 4 (lower is better)
Translates to: GFNFSSPVDDCQLQGVASNQMLD*WGILNQ
Trigger: TTGGTTAAGTATCCCCCAGCAGTCCAACATTTGGTT...GGATGCTACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000640769.2
CDS-3UTR GCA 90 bp GAAGAATGTTCACCACAGTTCCCCAGAGCCCACCGGAAATGTTCTGACAACTGTAACCAAATGTTGGACTaGTGGGGGATACTTAACCAA +
Preference number: 4 (lower is better)
Translates to: EECSPQFPRAHRKCSDNCNQMLD*WGILNQ
Trigger: TTGGTTAAGTATCCCCCAGCAGTCCAACATTTGGTT...ACAGTTGTCAGAACATTTCCGGTGGGCTCTGGGGAACTGTGGTGAACATTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR GCA 90 bp GCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCAAAAGTCCATCCAGAATaGCATCAATTTCAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: AGFNFSSPVDDCQLQGVAKVHPE*HQFQPA
Trigger: TGCAGGCTGAAATTGATGGCATTCTGGATGGACTTT...TGCTACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000640769.2
CDS-3UTR GCA 90 bp AAGGACTTCAAGGTAACCCCACATGGACCAGGGCAACCCTTTAAAGACAATCTGGGCGGCACTTCCATCTaGTGGAAATTACTTTTGTCT +
Preference number: 4 (lower is better)
Translates to: KDFKVTPHGPGQPFKDNLGGTSI*WKLLLS
Trigger: AGACAAAAGTAATTTCCAGCAGATGGAAGTGCCGCC...CAGATTGTCTTTAAAGGGTTGCCCTGGTCCATGTGGGGTTACCTTGAAGTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR GCA 90 bp ACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGGCGGCACTTCCATCTaGTGGAAATTACTTTTGTCT +
Preference number: 4 (lower is better)
Translates to: TAGFNFSSPVDDCQLQGVGGTSI*WKLLLS
Trigger: AGACAAAAGTAATTTCCAGCAGATGGAAGTGCCGCC...TACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000640769.2
CDS-3UTR GCA 90 bp AACAAAGAGAACTGCAACCATTTGGAAAATTTGCAGTATAGACACAAAGGAGCTCAGAAGGCCGAGGGCTaGTGCTTCCTGGGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: NKENCNHLENLQYRHKGAQKAEG*CFLGKD
Trigger: ATCCTTCCCCAGGAAGCAGCAGCCCTCGGCCTTCTG...AGCTCCTTTGTGTCTATACTGCAAATTTTCCAAATGGTTGCAGTTCTCTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR GCA 90 bp GGTGAAGATTTCATATACCTTTTCAACAGTCTCCAACTTAATAACCAGCTCTCTCAGAAGGCCGAGGGCTaGTGCTTCCTGGGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: GEDFIYLFNSLQLNNQLSQKAEG*CFLGKD
Trigger: ATCCTTCCCCAGGAAGCAGCAGCCCTCGGCCTTCTG...AGAGAGCTGGTTATTAAGTTGGAGACTGTTGAAAAGGTATATGAAATCTTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR GCA 90 bp TATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAAGTCCACTAGAGGACGCTaGATCCCAGTCCTGGCCATC +
Preference number: 4 (lower is better)
Translates to: YVPRTFYAFSTERKRHRKSTRGR*IPVLAI
Trigger: GATGGCCAGGACTGGGATGCAGCGTCCTCTAGTGGA...CTTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR GCA 90 bp CAAGGTGTAGCATCCCATGGCACTCAGGAAGAATTAAGGAGCTGCACGAGGTTTCTATACCAAAAAGGCTaGTGTCATCCCAGATATCTG +
Preference number: 4 (lower is better)
Translates to: QGVASHGTQEELRSCTRFLYQKG*CHPRYL
Trigger: CAGATATCTGGGATGACAGCAGCCTTTTTGGTATAG...AAACCTCGTGCAGCTCCTTAATTCTTCCTGAGTGCCATGGGATGCTACACCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR GCA 90 bp GAAGAATGTTCACCACAGTTCCCCAGAGCCCACCGGAAATGTTCTGACAACTGTCTATACCAAAAAGGCTaGTGTCATCCCAGATATCTG +
Preference number: 4 (lower is better)
Translates to: EECSPQFPRAHRKCSDNCLYQKG*CHPRYL
Trigger: CAGATATCTGGGATGACAGCAGCCTTTTTGGTATAG...ACAGTTGTCAGAACATTTCCGGTGGGCTCTGGGGAACTGTGGTGAACATTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR GCA 90 bp AAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGAAGCATCACCTCTGGCTaGTCCAAACTGATACTACTT +
Preference number: 4 (lower is better)
Translates to: KAQKVVSCYYFWRAATTGSITSG*SKLILL
Trigger: AAGTAGTATCAGTTTGGAGCAGCCAGAGGTGATGCT...TCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR GCA 90 bp GTTTCTTCTCGTGCCTGTGACTCTGTCAGAACCAAGAGGTCTAACAGTGGGTTTCTTGTTCCAGGTCAATaGTGTCATCATCAATCGTCC +
Preference number: 4 (lower is better)
Translates to: VSSRACDSVRTKRSNSGFLVPGQ*CHHQSS
Trigger: GGACGATTGATGATGACAGCATTGACCTGGAACAAG...AAACCCACTGTTAGACCTCTTGGTTCTGACAGAGTCACAGGCACGAGAAGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR GCA 90 bp CACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGTTGCTTAGAAGGAGAATaGAGTTACCCAGAGGATCTT +
Preference number: 4 (lower is better)
Translates to: HRKLSAAITSGELPQLDGCLEGE*SYPEDL
Trigger: AAGATCCTCTGGGTAACTGCATTCTCCTTCTAAGCA...ACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
CDS-3UTR GCA 90 bp AGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTGTCAGAACTTGCTTTaGTTAGAAGGAGAATGCAGT +
Preference number: 4 (lower is better)
Translates to: SCYTQLASTLAPLLMTVSCQNLL*LEGECS
Trigger: ACTGCATTCTCCTTCTAAGCAAAGCAAGTTCTGACA...GCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
CDS-3UTR GCA 90 bp TTCTGGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTTGTCAGAACTTGCTTTaGTTAGAAGGAGAATGCAGT +
Preference number: 4 (lower is better)
Translates to: FWRAATTGRCWSITSSLSCQNLL*LEGECS
Trigger: ACTGCATTCTCCTTCTAAGCAAAGCAAGTTCTGACA...AGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
CDS-3UTR GCA 90 bp AAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGAAAAAGAGAAGACTGTTaGGAGAGCGAAACACGCATG +
Preference number: 4 (lower is better)
Translates to: KAQKVVSCYYFWRAATTGKREDC*ESETRM
Trigger: CATGCGTGTTTCGCTCTCGCAACAGTCTTCTCTTTT...TCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
CDS-3UTR GCA 90 bp TGGAGTAAGGACTCACAGCATGGTGTCCAATTACATGAACAGGTAGATGGTACCGGTTGTCCAAGAGGCTaGACATTGCTGAAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: WSKDSQHGVQLHEQVDGTGCPRG*TLLKEE
Trigger: CTCTTCTTTCAGCAATGTGCAGCCTCTTGGACAACC...GGTACCATCTACCTGTTCATGTAATTGGACACCATGCTGTGAGTCCTTACTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR GCA 90 bp AGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTTTGTCGAAAAGCCTTTaGAGTGTCTCTGGGAGCAAT +
Preference number: 4 (lower is better)
Translates to: RRGSTLCREVARLQVTAALSKSL*SVSGSN
Trigger: ATTGCTCCCAGAGACACTGCAAAGGCTTTTCGACAA...AGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp CAAGGTGTAGCATCCCATGGCACTCAGGAAGAATTAAGGAGCTGCACGAGGTTTTATGAGGGTAGCATCTaGAATGCTACAGAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: QGVASHGTQEELRSCTRFYEGSI*NATEKF
Trigger: GAACTTCTCTGTAGCATTGCAGATGCTACCCTCATA...AAACCTCGTGCAGCTCCTTAATTCTTCCTGAGTGCCATGGGATGCTACACCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGTATGAGGGTAGCATCTaGAATGCTACAGAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: SSGNSCYTQLASTLAPLLYEGSI*NATEKF
Trigger: GAACTTCTCTGTAGCATTGCAGATGCTACCCTCATA...CAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp AAGCATAAAAACCATCTGCTGAACCGTGGTGTTCTCCAGTGGCATCTGGGAAGCACCAATAAACATGACTaGAGAAGCCTGGACAAAGAG +
Preference number: 4 (lower is better)
Translates to: KHKNHLLNRGVLQWHLGSTNKHD*RSLDKE
Trigger: CTCTTTGTCCAGGCTTCTGCAGTCATGTTTATTGGT...GCTTCCCAGATGCCACTGGAGAACACCACGGTTCAGCAGATGGTTTTTATGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGACCAATAAACATGACTaGAGAAGCCTGGACAAAGAG +
Preference number: 4 (lower is better)
Translates to: SSGNSCYTQLASTLAPLLTNKHD*RSLDKE
Trigger: CTCTTTGTCCAGGCTTCTGCAGTCATGTTTATTGGT...CAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TGGGAAAGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACACTGGAGATGCCCTTTTaGTTCTTCGGTCAAGAGAAC +
Preference number: 4 (lower is better)
Translates to: WERRGSTLCREVARLQVTLEMPF*FFGQEN
Trigger: GTTCTCTTGACCGAAGAAGCAAAAGGGCATCTCCAG...TGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCTTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp CTTCTACTGACAGCCAGCAGTGACATCAATGCATTTGCAGCTACTCTTTTCAGGCTGGAGATGCCCTTTTaGTTCTTCGGTCAAGAGAAC +
Preference number: 4 (lower is better)
Translates to: LLLTASSDINAFAATLFRLEMPF*FFGQEN
Trigger: GTTCTCTTGACCGAAGAAGCAAAAGGGCATCTCCAG...CCTGAAAAGAGTAGCTGCAAATGCATTGATGTCACTGCTGGCTGTCAGTAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp AGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTCAAAGCATGTTTCTGTaGTCTTCTACTGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: RRGSTLCREVARLQVTAAQSMFL*SSTDSQ
Trigger: CTGGCTGTCAGTAGAAGAGCACAGAAACATGCTTTG...AGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp CTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAACAAAGCATGTTTCTGTaGTCTTCTACTGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: LHTAGFNFSSPVDDCQLQQSMFL*SSTDSQ
Trigger: CTGGCTGTCAGTAGAAGAGCACAGAAACATGCTTTG...TTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp CACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGGCAGTTTCTTAGGAGCTaGATGGCAATGCTTAACTCT +
Preference number: 4 (lower is better)
Translates to: HNWTVLEYHQFSLSWERRQFLRS*MAMLNS
Trigger: AGAGTTAAGCATTGCCATGCAGCTCCTAAGAAACTG...CCTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp GGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCATCCCAGTTTCTTAGGAGCTaGATGGCAATGCTTAACTCT +
Preference number: 4 (lower is better)
Translates to: GFNFSSPVDDCQLQGVASQFLRS*MAMLNS
Trigger: AGAGTTAAGCATTGCCATGCAGCTCCTAAGAAACTG...GGATGCTACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp CCGTGGTGTTCTCCAGTGGCATCTGGGAAGCCAACTTTAGGATACACAGCATCAGTGAGCTTCAAGAGCTaGTTCTTTACATTCCTCATT +
Preference number: 4 (lower is better)
Translates to: PWCSPVASGKPTLGYTASVSFKS*FFTFLI
Trigger: AATGAGGAATGTAAAGAAGCAGCTCTTGAAGCTCAC...TGATGCTGTGTATCCTAAAGTTGGCTTCCCAGATGCCACTGGAGAACACCACGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp GAAAGGAATTGCAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGACAAGCCTAGCTGCAGAGAAATTTaGATCAATGAATCATCCATC +
Preference number: 4 (lower is better)
Translates to: ERNCKLAVYRAGHVADKPSCREI*INESSI
Trigger: GATGGATGATTCATTGATGCAAATTTCTCTGCAGCT...AGGCTTGTCTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAATTCCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp CCGTGGTGTTCTCCAGTGGCATCTGGGAAGCCAACTTTAGGATACACAGCATCACTCAGAATCATTTGTTaGCCATCTTCTCCAGATGAT +
Preference number: 4 (lower is better)
Translates to: PWCSPVASGKPTLGYTASLRIIC*PSSPDD
Trigger: ATCATCTGGAGAAGATGGGCAACAAATGATTCTGAG...TGATGCTGTGTATCCTAAAGTTGGCTTCCCAGATGCCACTGGAGAACACCACGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp GCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGCTCAGAATCATTTGTTaGCCATCTTCTCCAGATGAT +
Preference number: 4 (lower is better)
Translates to: AQKVVSCYYFWRAATTGRLRIIC*PSSPDD
Trigger: ATCATCTGGAGAAGATGGGCAACAAATGATTCTGAG...CCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp CTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGCTCAGAATCATTTGTTaGCCATCTTCTCCAGATGAT +
Preference number: 4 (lower is better)
Translates to: LPQLDGVGVSPVLSLMGKLRIIC*PSSPDD
Trigger: ATCATCTGGAGAAGATGGGCAACAAATGATTCTGAG...CTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp AGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGAGGCAATAAAGGGCTaGTCTTGTGCTTGTATTTGC +
Preference number: 4 (lower is better)
Translates to: RGSTSSGNSCYTQLASTLEAIKG*SCACIC
Trigger: GCAAATACAAGCACAAGAGCAGCCCTTTATTGCCTC...TAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TGCCTTCTGATAATTGTAAATCAGAGCCCAAAGGGCAGCTGCTCCAATCCTCTGGAGGCAATAAAGGGCTaGTCTTGTGCTTGTATTTGC +
Preference number: 4 (lower is better)
Translates to: CLLIIVNQSPKGSCSNPLEAIKG*SCACIC
Trigger: GCAAATACAAGCACAAGAGCAGCCCTTTATTGCCTC...CAGAGGATTGGAGCAGCTGCCCTTTGGGCTCTGATTTACAATTATCAGAAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TATGAGGGTAGCATCTGCAATGCTACAGAGAAGTTCTATGAGATGAGCTTGTCGTTACTTCTGGAGAGCTaGCACAACTGGACGGTGTTG +
Preference number: 4 (lower is better)
Translates to: YEGSICNATEKFYEMSLSLLLES*HNWTVL
Trigger: CAACACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAA...CGACAAGCTCATCTCATAGAACTTCTCTGTAGCATTGCAGATGCTACCCTCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000579986.6
ENST00000583043.5
ENST00000679113.1
CDS-3UTR GCA 90 bp AGACAGGCAGCAAGCACAGTAATGACTTTTTCATTAGCCAGGATCTTGGGTTTACTCGTCCCGTCAATCTaGAGCCGCCGGAGAATTAAA +
Preference number: 4 (lower is better)
Translates to: RQAASTVMTFSLARILGLLVPSI*SRRRIK
Trigger: TTTAATTCTCCGGCGGCTGCAGATTGACGGGACGAG...TAAACCCAAGATCCTGGCTAATGAAAAAGTCATTACTGTGCTTGCTGCCTGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581161.5
CDS-3UTR GCA 90 bp AAATCAGTAACTCTGGAGAGAACTCTGGCGTCTATTAGAGGACGCTTTGTATCAGCAGCAGTGTTCACCTaGTCAACAACACAGACCCGA +
Preference number: 4 (lower is better)
Translates to: KSVTLERTLASIRGRFVSAAVFT*STTQTR
Trigger: TCGGGTCTGTGTTGTTGAGCAGGTGAACACTGCTGC...TGATACAAAGCGTCCTCTAATAGACGCCAGAGTTCTCTCCAGAGTTACTGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638251.1
CDS-3UTR GCA 90 bp CACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGGACCAACAAAGAGAACTaGAACCTCTACTCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: HNWTVLEYHQFSLSWERRTNKEN*NLYSLS
Trigger: AGACAAGGAGTAGAGGTTGCAGTTCTCTTTGTTGGT...CCTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679113.1
CDS-3UTR CCA 90 bp CCATCAAAATCCAAGGCCAGAGAGAGTGCAAGACAGGGACAAGGTGAGCTTCAACAAATGTTGGACTGCTaGGGGATACTTAACCAATCT +
Preference number: 4 (lower is better)
Translates to: PSKSKARESARQGQGELQQMLDC*GILNQS
Trigger: AGATTGGTTAAGTATCCCCCAGCAGTCCAACATTTG...TTGAAGCTCACCTTGTCCCTGTCTTGCACTCTCTCTGGCCTTGGATTTTGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581161.5
CDS-3UTR CCA 90 bp GCATTTATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGGCTTTCAAATCTCCTCTGGGTCGCTaGCCTGTGCGCCCAACCACA +
Preference number: 4 (lower is better)
Translates to: AFMCFICSMQLSIRLAFKSPLGR*PVRPTT
Trigger: TGTGGTTGGGCGCACAGGCCAGCGACCCAGAGGAGA...TTTGAAAGCCAATCTTATAGACAATTGCATGGAGCAGATGAAACACATAAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CCA 90 bp GGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGAATGAACGGATATCCTaGAGTTTACATGAGCATGAC +
Preference number: 4 (lower is better)
Translates to: GTESCQLLLLLESCHNWTNERIS*SLHEHD
Trigger: GTCATGCTCATGTAAACTCCAGGATATCCGTTCATT...CGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CCA 90 bp CAGTATACAGGGCAGGACACGTGGCAGACAAGCCTGCACATGTGCAGAACATATAATGAACGGATATCCTaGAGTTTACATGAGCATGAC +
Preference number: 4 (lower is better)
Translates to: QYTGQDTWQTSLHMCRTYNERIS*SLHEHD
Trigger: GTCATGCTCATGTAAACTCCAGGATATCCGTTCATT...ATATGTTCTGCACATGTGCAGGCTTGTCTGCCACGTGTCCTGCCCTGTATACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CCA 90 bp ACTGGTCCAGAAGAATGTTCACCACAGTTCCCCAGAGCCCACCGGAAATGTTCTAATGAACGGATATCCTaGAGTTTACATGAGCATGAC +
Preference number: 4 (lower is better)
Translates to: TGPEECSPQFPRAHRKCSNERIS*SLHEHD
Trigger: GTCATGCTCATGTAAACTCCAGGATATCCGTTCATT...AGAACATTTCCGGTGGGCTCTGGGGAACTGTGGTGAACATTCTTCTGGACCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CCA 90 bp TTCTGGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTAATGAACGGATATCCTaGAGTTTACATGAGCATGAC +
Preference number: 4 (lower is better)
Translates to: FWRAATTGRCWSITSSLSNERIS*SLHEHD
Trigger: GTCATGCTCATGTAAACTCCAGGATATCCGTTCATT...AGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CCA 90 bp AGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTACAGCTGATTCCAGAATaGAGACACAAAACTGGGGAA +
Preference number: 4 (lower is better)
Translates to: RGSTSSGNSCYTQLASTLQLIPE*RHKTGE
Trigger: TTCCCCAGTTTTGTGTCTCCATTCTGGAATCAGCTG...TAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CCA 90 bp AAAAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGCACAAGCATCACCTCTaGCTGCTCCAAACTGATACT +
Preference number: 4 (lower is better)
Translates to: KRHRKLSAAITSGELPQLHKHHL*LLQTDT
Trigger: AGTATCAGTTTGGAGCAGCCAGAGGTGATGCTTGTG...CAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CCA 90 bp CTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAATTTCACTCGTGGCAATaGGTGAGACAACATATGGAG +
Preference number: 4 (lower is better)
Translates to: LHTAGFNFSSPVDDCQLQFHSWQ*VRQHME
Trigger: CTCCATATGTTGTCTCACCCATTGCCACGAGTGAAA...TTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CCA 90 bp TGCGAGAGCGAAACACGCATGACTGGATCACCACATAAAACCTTCCTCAAGAGTTTCAGCTTTCACTCGTaGCAATGGGTGAGACAACAT +
Preference number: 4 (lower is better)
Translates to: CESETRMTGSPHKTFLKSFSFHS*QWVRQH
Trigger: ATGTTGTCTCACCCATTGCCACGAGTGAAAGCTGAA...ACTCTTGAGGAAGGTTTTATGTGGTGATCCAGTCATGCGTGTTTCGCTCTCGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR CCA 90 bp TGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACAAGAGTGTGAGGCATaGTTGTACCAAACATTCTAC +
Preference number: 4 (lower is better)
Translates to: CREVARLQVTAATHSWLQQECEA*LYQTFY
Trigger: GTAGAATGTTTGGTACAACCATGCCTCACACTCTTG...TTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
CDS-3UTR CCA 90 bp GGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCATCCCAAGAGTGTGAGGCATaGTTGTACCAAACATTCTAC +
Preference number: 4 (lower is better)
Translates to: GFNFSSPVDDCQLQGVASQECEA*LYQTFY
Trigger: GTAGAATGTTTGGTACAACCATGCCTCACACTCTTG...GGATGCTACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
CDS-3UTR CCA 90 bp CCGTGGTGTTCTCCAGTGGCATCTGGGAAGCCAACTTTAGGATACACAGCATCACAAACTGAAGACCGATaGCAAAGAAGGTTTATTGGA +
Preference number: 4 (lower is better)
Translates to: PWCSPVASGKPTLGYTASQTEDR*QRRFIG
Trigger: TCCAATAAACCTTCTTTGCCATCGGTCTTCAGTTTG...TGATGCTGTGTATCCTAAAGTTGGCTTCCCAGATGCCACTGGAGAACACCACGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CCA 90 bp AGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCCAAACTGAAGACCGATaGCAAAGAAGGTTTATTGGA +
Preference number: 4 (lower is better)
Translates to: SCYTQLASTLAPLLMTVSQTEDR*QRRFIG
Trigger: TCCAATAAACCTTCTTTGCCATCGGTCTTCAGTTTG...GCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp GCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAACAAACTGAAGACCGATaGCAAAGAAGGTTTATTGGA +
Preference number: 4 (lower is better)
Translates to: AATTGRCWSITSSLSHGKQTEDR*QRRFIG
Trigger: TCCAATAAACCTTCTTTGCCATCGGTCTTCAGTTTG...TTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp ACAGAAAGGAATTGCAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGACAAGATAAGGGCAAAACTATaGAGTAAGGACTCACAGCAT +
Preference number: 4 (lower is better)
Translates to: TERNCKLAVYRAGHVADKIRAKL*SKDSQH
Trigger: ATGCTGTGAGTCCTTACTCCATAGTTTTGCCCTTAT...CTTGTCTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAATTCCTTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CCA 90 bp CAGCCAGCAGTGACATCAATGCATTTGCAGCTACTCTTTTCAGGATATCTTTGGTTGCAGCCTGAACAATaGAATGGAGGCAGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: QPAVTSMHLQLLFSGYLWLQPEQ*NGGSPA
Trigger: TGCAGGACTGCCTCCATTCCATTGTTCAGGCTGCAA...CCAAAGATATCCTGAAAAGAGTAGCTGCAAATGCATTGATGTCACTGCTGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CCA 90 bp CAGTATACAGGGCAGGACACGTGGCAGACAAGCCTGCACATGTGCAGAACATATATACTACATTCTGACTaGTCCAGAAGAATGTTCACC +
Preference number: 4 (lower is better)
Translates to: QYTGQDTWQTSLHMCRTYILHSD*SRRMFT
Trigger: GGTGAACATTCTTCTGGACCAGTCAGAATGTAGTAT...ATATGTTCTGCACATGTGCAGGCTTGTCTGCCACGTGTCCTGCCCTGTATACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CCA 90 bp TTCTGGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTATACTACATTCTGACTaGTCCAGAAGAATGTTCACC +
Preference number: 4 (lower is better)
Translates to: FWRAATTGRCWSITSSLSILHSD*SRRMFT
Trigger: GGTGAACATTCTTCTGGACCAGTCAGAATGTAGTAT...AGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCCAGAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp CATCCGTCACTTTCAGACACTGGAGCAGTTTCAGAGCCAGCTGCGTTTGAAAAACTGACTTGTCCTAGATaGAGCCCTCCAAAACTTGAA +
Preference number: 4 (lower is better)
Translates to: HPSLSDTGAVSEPAAFEKLTCPR*SPPKLE
Trigger: TTCAAGTTTTGGAGGGCTCCATCTAGGACAAGTCAG...TTTTTCAAACGCAGCTGGCTCTGAAACTGCTCCAGTGTCTGAAAGTGACGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CCA 90 bp TGGGAAAGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACAGGTGGAGAGAGAACTTaGATCTCGATCCTGACTTGT +
Preference number: 4 (lower is better)
Translates to: WERRGSTLCREVARLQVTGGERT*ISILTC
Trigger: ACAAGTCAGGATCGAGATCCAAGTTCTCTCTCCACC...TGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCTTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp TGTGCTCTTCTACTGACAGCCAGCAGTGACATCAATGCATTTGCAGCTACTCTTGGTGGAGAGAGAACTTaGATCTCGATCCTGACTTGT +
Preference number: 4 (lower is better)
Translates to: CALLLTASSDINAFAATLGGERT*ISILTC
Trigger: ACAAGTCAGGATCGAGATCCAAGTTCTCTCTCCACC...AAGAGTAGCTGCAAATGCATTGATGTCACTGCTGGCTGTCAGTAGAAGAGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CCA 90 bp TCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGATGACTGCAGAAGCCTaGACAAAGAGGATAGGTATT +
Preference number: 4 (lower is better)
Translates to: SGNSCYTQLASTLAPLLMMTAEA*TKRIGI
Trigger: AATACCTATCCTCTTTGTCCAGGCTTCTGCAGTCAT...CATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp AGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGTTTTGCTCTTAGCCTaGAGATGCCCTTTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: RGSTSSGNSCYTQLASTLVLLLA*RCPFAS
Trigger: AGAAGCAAAAGGGCATCTCCAGGCTAAGAGCAAAAC...TAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp CTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAATTCTCCAGTGGCATCTaGGAAGCCAACTTTAGGATA +
Preference number: 4 (lower is better)
Translates to: LHTAGFNFSSPVDDCQLQFSSGI*EANFRI
Trigger: TATCCTAAAGTTGGCTTCCCAGATGCCACTGGAGAA...TTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp AGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTATTCTCCAGTGGCATCTaGGAAGCCAACTTTAGGATA +
Preference number: 4 (lower is better)
Translates to: RGSTSSGNSCYTQLASTLFSSGI*EANFRI
Trigger: TATCCTAAAGTTGGCTTCCCAGATGCCACTGGAGAA...TAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp AAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGATTCTCCAGTGGCATCTaGGAAGCCAACTTTAGGATA +
Preference number: 4 (lower is better)
Translates to: KAQKVVSCYYFWRAATTGFSSGI*EANFRI
Trigger: TATCCTAAAGTTGGCTTCCCAGATGCCACTGGAGAA...TCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp GCTGAGCTAAATTTGAACCCAGGCTTATACAGCCCCAACTCTATTTCTTTCTTCCGTGGTGTTCTCCAGTaGCATCTGGGAAGCCAACTT +
Preference number: 4 (lower is better)
Translates to: AELNLNPGLYSPNSISFFRGVLQ*HLGSQL
Trigger: AAGTTGGCTTCCCAGATGCCACTGGAGAACACCACG...GAAGAAAGAAATAGAGTTGGGGCTGTATAAGCCTGGGTTCAAATTTAGCTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578780.2
ENST00000639487.1
ENST00000640769.2
CDS-3UTR CCA 90 bp CCATCAAGCCTCAGAATCATTTGTTGCCCATCTTCTCCAGATGATATATTCAGGCGTGGTGTTCTCCAGTaGCATCTGGGAAGCCAACTT +
Preference number: 4 (lower is better)
Translates to: PSSLRIICCPSSPDDIFRRGVLQ*HLGSQL
Trigger: AAGTTGGCTTCCCAGATGCCACTGGAGAACACCACG...CCTGAATATATCATCTGGAGAAGATGGGCAACAAATGATTCTGAGGCTTGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CCA 90 bp AGACAGGCAGCAAGCACAGTAATGACTTTTTCATTAGCCAGGATCTTGGGTTTACGTGGTGTTCTCCAGTaGCATCTGGGAAGCCAACTT +
Preference number: 4 (lower is better)
Translates to: RQAASTVMTFSLARILGLRGVLQ*HLGSQL
Trigger: AAGTTGGCTTCCCAGATGCCACTGGAGAACACCACG...TAAACCCAAGATCCTGGCTAATGAAAAAGTCATTACTGTGCTTGCTGCCTGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CCA 90 bp CTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAAGGTGTAGCATCCCATaGCACTCAGGAAGAATTAAG +
Preference number: 4 (lower is better)
Translates to: LHTAGFNFSSPVDDCQLQRCSIP*HSGRIK
Trigger: CTTAATTCTTCCTGAGTGCCATGGGATGCTACACCT...TTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp TGCGAGAGCGAAACACGCATGACTGGATCACCACATAAAACCTTCCTCAAGAGTAGGTGTAGCATCCCATaGCACTCAGGAAGAATTAAG +
Preference number: 4 (lower is better)
Translates to: CESETRMTGSPHKTFLKSRCSIP*HSGRIK
Trigger: CTTAATTCTTCCTGAGTGCCATGGGATGCTACACCT...ACTCTTGAGGAAGGTTTTATGTGGTGATCCAGTCATGCGTGTTTCGCTCTCGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581161.5
CDS-3UTR CCA 90 bp AGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAAGGTGTAGCATCCCATaGCACTCAGGAAGAATTAAG +
Preference number: 4 (lower is better)
Translates to: RGSTSSGNSCYTQLASTLRCSIP*HSGRIK
Trigger: CTTAATTCTTCCTGAGTGCCATGGGATGCTACACCT...TAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp ACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTACAGTTCTCTCTCTCATaGGAAAGAAGGGGATCAACA +
Preference number: 4 (lower is better)
Translates to: TAGFNFSSPVDDCQLQGVQFSLS*ERRGST
Trigger: TGTTGATCCCCTTCTTTCCCATGAGAGAGAGAACTG...TACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp TGTGCTCTTCTACTGACAGCCAGCAGTGACATCAATGCATTTGCAGCTACTCTTAGCTGCTATTACTTCTaGAGAGCTGCCACAACTGGA +
Preference number: 4 (lower is better)
Translates to: CALLLTASSDINAFAATLSCYYF*RAATTG
Trigger: TCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCT...AAGAGTAGCTGCAAATGCATTGATGTCACTGCTGGCTGTCAGTAGAAGAGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR TCA 90 bp TTCTGGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTTTTGACAATTCAGTTTaGTTGGTTTGGTATGAGGCA +
Preference number: 4 (lower is better)
Translates to: FWRAATTGRCWSITSSLSFDNSV*LVWYEA
Trigger: TGCCTCATACCAAACCAATCAAACTGAATTGTCAAA...AGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255674.11
ENST00000640769.2
CDS-3UTR TCA 90 bp CACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGGATATCCAAAGGTGAATaGACGGATATCCTGGAGTTT +
Preference number: 4 (lower is better)
Translates to: HNWTVLEYHQFSLSWERRISKGE*TDILEF
Trigger: AAACTCCAGGATATCCGTTCATTCACCTTTGGATAT...CCTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR TCA 90 bp CTTCTACTGACAGCCAGCAGTGACATCAATGCATTTGCAGCTACTCTTTTCAGGCTGGCTGCTCCAAACTaGTACTACTTTTATGGTAGC +
Preference number: 4 (lower is better)
Translates to: LLLTASSDINAFAATLFRLAAPN*YYFYGS
Trigger: GCTACCATAAAAGTAGTATCAGTTTGGAGCAGCCAG...CCTGAAAAGAGTAGCTGCAAATGCATTGATGTCACTGCTGGCTGTCAGTAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR TCA 90 bp GCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGCCACAACAGCTTCATaGATATTTGGATATTCCAAA +
Preference number: 4 (lower is better)
Translates to: AATTGRCWSITSSLSHGKATTAS*IFGYSK
Trigger: TTTGGAATATCCAAATATTCATGAAGCTGTTGTGGC...TTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR TCA 90 bp GCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGGCCACAACAGCTTCATaGATATTTGGATATTCCAAA +
Preference number: 4 (lower is better)
Translates to: AQKVVSCYYFWRAATTGRATTAS*IFGYSK
Trigger: TTTGGAATATCCAAATATTCATGAAGCTGTTGTGGC...CCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR TCA 90 bp CAGACACTGGAGCAGTTTCAGAGCCAGCTGCGTTTGAAAAACGTAAAGAAGTTCAGTAATGGACTGGCCTaGGCAGATTTCCAGATCTTT +
Preference number: 4 (lower is better)
Translates to: QTLEQFQSQLRLKNVKKFSNGLA*ADFQIF
Trigger: AAAGATCTGGAAATCTGCTCAGGCCAGTCCATTACT...GAACTTCTTTACGTTTTTCAAACGCAGCTGGCTCTGAAACTGCTCCAGTGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp GTTTCTTCTCGTGCCTGTGACTCTGTCAGAACCAAGAGGTCTAACAGTGGGTTTAATTCCATTGCAAAGTaGAGACACGGGTTTAGTGAC +
Preference number: 4 (lower is better)
Translates to: VSSRACDSVRTKRSNSGFNSIAK*RHGFSD
Trigger: GTCACTAAACCCGTGTCTTCACTTTGCAATGGAATT...AAACCCACTGTTAGACCTCTTGGTTCTGACAGAGTCACAGGCACGAGAAGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp CATCCGTCACTTTCAGACACTGGAGCAGTTTCAGAGCCAGCTGCGTTTGAAAAATCACTTTCGGGCTCTTaGATGCCAAATACAGAGATT +
Preference number: 4 (lower is better)
Translates to: HPSLSDTGAVSEPAAFEKSLSGS*MPNTEI
Trigger: AATCTCTGTATTTGGCATTCAAGAGCCCGAAAGTGA...TTTTTCAAACGCAGCTGGCTCTGAAACTGCTCCAGTGTCTGAAAGTGACGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp TGGGAAAGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACAAGAGCGAAACACGCATaGCTGGATCACCACATAAAA +
Preference number: 4 (lower is better)
Translates to: WERRGSTLCREVARLQVTRAKHA*LDHHIK
Trigger: TTTTATGTGGTGATCCAGTCATGCGTGTTTCGCTCT...TGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCTTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
CDS-3UTR TCA 90 bp GCACCAGCTTTCCTCAGGAGCATGGCCAGAAGATTAAATAAATGTGTCCATGTGGCAATCAGTTCTTTCTaGAGTTGTTGCCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: APAFLRSMARRLNKCVHVAISSF*SCCLTA
Trigger: TGCTGTCAGGCAACAACTTCAGAAAGAACTGATTGC...CACATGGACACATTTATTTAATCTTCTGGCCATGCTCCTGAGGAAAGCTGGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp CACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGTATCTCATGGGATAAGTaGAGCAAGCAAAGAATTGTG +
Preference number: 4 (lower is better)
Translates to: HRKLSAAITSGELPQLDGISWDK*SKQRIV
Trigger: CACAATTCTTTGCTTGCTTCACTTATCCCATGAGAT...ACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp TGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCATCTCATGGGATAAGTaGAGCAAGCAAAGAATTGTG +
Preference number: 4 (lower is better)
Translates to: CYTQLASTLAPLLMTVSFISWDK*SKQRIV
Trigger: CACAATTCTTTGCTTGCTTCACTTATCCCATGAGAT...GAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp CCCTTTACAAATAATGCACACTTACTTCTACATAGCCCTTTTCCAGTGTGGATGAGGCAAGAACCAAAGTaGCATCCACTCCAAGCTCCC +
Preference number: 4 (lower is better)
Translates to: PFTNNAHLLLHSPFPVWMRQEPK*HPLQAP
Trigger: GGGAGCTTGGAGTGGATGTCACTTTGGTTCTTGCCT...CATCCACACTGGAAAAGGGCTATGTAGAAGTAAGTGTGCATTATTTGTAAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640769.2
CDS-3UTR TCA 90 bp TGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCATATGTTCTTCACTATaGCTACCCAAAGGCAAGAAC +
Preference number: 4 (lower is better)
Translates to: CYTQLASTLAPLLMTVSFICSSL*LPKGKN
Trigger: GTTCTTGCCTTTGGGTAGTCATAGTGAAGAACATAT...GAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GAAGAATGTTCACCACAGTTCCCCAGAGCCCACCGGAAATGTTCTGACAACTGTATATGTTCTTCACTATaGCTACCCAAAGGCAAGAAC +
Preference number: 4 (lower is better)
Translates to: EECSPQFPRAHRKCSDNCICSSL*LPKGKN
Trigger: GTTCTTGCCTTTGGGTAGTCATAGTGAAGAACATAT...ACAGTTGTCAGAACATTTCCGGTGGGCTCTGGGGAACTGTGGTGAACATTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp GTGCCTGTGACTCTGTCAGAACCAAGAGGTCTAACAGTGGGTTTGCACTATGTCCAAGCCAATCCTTGTTaGGTAGGAATATGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: VPVTLSEPRGLTVGLHYVQANPC*VGICSS
Trigger: TGAAGAACATATTCCTACTCAACAAGGATTGGCTTG...GACATAGTGCAAACCCACTGTTAGACCTCTTGGTTCTGACAGAGTCACAGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp TCTTCTCGTGCCTGTGACTCTGTCAGAACCAAGAGGTCTAACAGTGGGTTTGCACAAGCCAATCCTTGTTaGGTAGGAATATGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: SSRACDSVRTKRSNSGFAQANPC*VGICSS
Trigger: TGAAGAACATATTCCTACTCAACAAGGATTGGCTTG...TGCAAACCCACTGTTAGACCTCTTGGTTCTGACAGAGTCACAGGCACGAGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp CAAGCCTCAGAATCATTTGTTGCCCATCTTCTCCAGATGATATATTCAGGAGTATGCCACCGTTGTTTCTaGGGTGGAGAGAGAACTTGG +
Preference number: 4 (lower is better)
Translates to: QASESFVAHLLQMIYSGVCHRCF*GGERTW
Trigger: CCAAGTTCTCTCTCCACCTCAGAAACAACGGTGGCA...TACTCCTGAATATATCATCTGGAGAAGATGGGCAACAAATGATTCTGAGGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp GGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCATCCAGAAGTTCTATGAGATaGGCTTGTCGAAAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: GFNFSSPVDDCQLQGVASRSSMR*ACRKAF
Trigger: AAAGGCTTTTCGACAAGCTCATCTCATAGAACTTCT...GGATGCTACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCATACAGAGAAGTTCTATaGGATGAGCTTGTCGAAAAG +
Preference number: 4 (lower is better)
Translates to: AGFNFSSPVDDCQLQGVAYREVL*DELVEK
Trigger: CTTTTCGACAAGCTCATCTCATAGAACTTCTCTGTA...TGCTACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp CACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGGTACAGAGAAGTTCTATaGGATGAGCTTGTCGAAAAG +
Preference number: 4 (lower is better)
Translates to: HNWTVLEYHQFSLSWERRYREVL*DELVEK
Trigger: CTTTTCGACAAGCTCATCTCATAGAACTTCTCTGTA...CCTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GGCAATAAAGGGCTGCTCTTGTGCTTGTATTTGCTCATCTCTGTTAGTAAGTCTACTGACAGCCAGCAGTaGCATCAATGCATTTGCAGC +
Preference number: 4 (lower is better)
Translates to: GNKGLLLCLYLLISVSKSTDSQQ*HQCICS
Trigger: GCTGCAAATGCATTGATGTCACTGCTGGCTGTCAGT...AGACTTACTAACAGAGATGAGCAAATACAAGCACAAGAGCAGCCCTTTATTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR TCA 90 bp AGACAGGCAGCAAGCACAGTAATGACTTTTTCATTAGCCAGGATCTTGGGTTTAAAGACAGGGACAAGGTaGGCTTCAAGAGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: RQAASTVMTFSLARILGLKTGTR*ASRAAS
Trigger: AGAAGCAGCTCTTGAAGCTCACCTTGTCCCTGTCTT...TAAACCCAAGATCCTGGCTAATGAAAAAGTCATTACTGTGCTTGCTGCCTGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR TCA 90 bp CTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAACGACAAGGCCAGGTTTaGAAGAAGCATAAAAACCAT +
Preference number: 4 (lower is better)
Translates to: LHTAGFNFSSPVDDCQLQRQGQV*KKHKNH
Trigger: ATGGTTTTTATGCTTCTTTCAAACCTGGCCTTGTCG...TTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp CTTTCTTCTTTATTACACAGCCTTGCAGAAGACAACGGTGAAGATTATACATGTCCCTGCCTCCCAGGTTaGAGAGATTCTCGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: LSSLLHSLAEDNGEDYTCPCLPG*RDSRAS
Trigger: TGAGGCACGAGAATCTCTTCAACCTGGGAGGCAGGG...ACATGTATAATCTTCACCGTTGTCTTCTGCAAGGCTGTGTAATAAAGAAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578780.2
ENST00000639487.1
ENST00000640769.2
CDS-3UTR TCA 90 bp TTCTGGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTTTTTGGCAATGCTTCTaGATTACTCCTTTACAGTCA +
Preference number: 4 (lower is better)
Translates to: FWRAATTGRCWSITSSLSFWQCF*ITPLQS
Trigger: TGACTGTAAAGGAGTAATTCAGAAGCATTGCCAAAA...AGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCCAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583043.5
CDS-3UTR TCA 90 bp GTAAGAAGTTACTCTTCTGAATTACTCCTTTACAGTCATGCGACAAGGCCAGGTACACTGATGAGATGCTaGGAACTGGCTTTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: VRSYSSELLLYSHATRPGTLMRC*ELALLG
Trigger: ACCCAGCAAAGCCAGTTCTCAGCATCTCATCAGTGT...ACCTGGCCTTGTCGCATGACTGTAAAGGAGTAATTCAGAAGAGTAACTTCTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639487.1
CDS-3UTR GCA 90 bp TGCGAGAGCGAAACACGCATGACTGGATCACCACATAAAACCTTCCTCAAGAGTAAAGTCCATCCAGAATaGCATCAATTTCAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: CESETRMTGSPHKTFLKSKVHPE*HQFQPA
Trigger: TGCAGGCTGAAATTGATGGCATTCTGGATGGACTTT...ACTCTTGAGGAAGGTTTTATGTGGTGATCCAGTCATGCGTGTTTCGCTCTCGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR GCA 90 bp TTCTTGCGTTTTAGTTTCAGAGTTCATTTGCTTCAACAGATTATCACTCCCATGAAGGCCGAGGGCTGCTaGTTCCTGGGGAAGGATTCT +
Preference number: 4 (lower is better)
Translates to: FLRFSFRVHLLQQIITPMKAEGC*FLGKDS
Trigger: AGAATCCTTCCCCAGGAAGCAGCAGCCCTCGGCCTT...CATGGGAGTGATAATCTGTTGAAGCAAATGAACTCTGAAACTAAAACGCAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR GCA 90 bp GCACCAGCTTTCCTCAGGAGCATGGCCAGAAGATTAAATAAATGTGTCCATGTGTGGGGAAGACTGAGCTaGTGGAATTGTAGTTCCAAT +
Preference number: 4 (lower is better)
Translates to: APAFLRSMARRLNKCVHVWGRLS*WNCSSN
Trigger: ATTGGAACTACAATTCCAGCAGCTCAGTCTTCCCCA...CACATGGACACATTTATTTAATCTTCTGGCCATGCTCCTGAGGAAAGCTGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR GCA 90 bp TGGGAAAGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACAAGCATCACCTCTGGCTaGTCCAAACTGATACTACTT +
Preference number: 4 (lower is better)
Translates to: WERRGSTLCREVARLQVTSITSG*SKLILL
Trigger: AAGTAGTATCAGTTTGGAGCAGCCAGAGGTGATGCT...TGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCTTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR GCA 90 bp AAGGCCAGAGAGAGTGCAAGACAGGGACAAGGTGAGCTTCAAGAGCTGCTTCTTACAGGAAGTTACAGGTaGATTCAATTGAATAAACGG +
Preference number: 4 (lower is better)
Translates to: KARESARQGQGELQELLLTGSYR*IQLNKR
Trigger: CCGTTTATTCAATTGAATGCACCTGTAACTTCCTGT...AAGAAGCAGCTCTTGAAGCTCACCTTGTCCCTGTCTTGCACTCTCTCTGGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR GCA 90 bp CACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGTTGTCAGAACTTGCTTTaGTTAGAAGGAGAATGCAGT +
Preference number: 4 (lower is better)
Translates to: HRKLSAAITSGELPQLDGCQNLL*LEGECS
Trigger: ACTGCATTCTCCTTCTAAGCAAAGCAAGTTCTGACA...ACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
CDS-3UTR GCA 90 bp TACTCCCCAATGAAGGTGCCACCGTTGTTTCTGAGGTGGAGAGAGAACTTGGATTGTCAGAACTTGCTTTaGTTAGAAGGAGAATGCAGT +
Preference number: 4 (lower is better)
Translates to: YSPMKVPPLFLRWRENLDCQNLL*LEGECS
Trigger: ACTGCATTCTCCTTCTAAGCAAAGCAAGTTCTGACA...ATCCAAGTTCTCTCTCCACCTCAGAAACAACGGTGGCACCTTCATTGGGGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR GCA 90 bp CAGTCCTGCAGCCCACTAGCCATGTGTGTTATCTTCAGAGTGAGGATGTCCTCTAACATTCTACAACCTTaGCATCTTGACTCACACATT +
Preference number: 4 (lower is better)
Translates to: QSCSPLAMCVIFRVRMSSNILQP*HLDSHI
Trigger: AATGTGTGAGTCAAGATGGCAAGGTTGTAGAATGTT...AGAGGACATCCTCACTCTGAAGATAACACACATGGCTAGTGGGCTGCAGGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638251.1
CDS-3UTR GCA 90 bp AGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGGTTTCAGAGTTCATTTaGTTCAACAGATTATCACTC +
Preference number: 4 (lower is better)
Translates to: RAATTGRCWSITSSLSHGVSEFI*FNRLSL
Trigger: GAGTGATAATCTGTTGAAGCAAATGAACTCTGAAAC...CCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000679113.1
CDS-3UTR GCA 90 bp ATGGACCAGGGCAACCCTTTAAAGACAATCTGTCATTCAGAAGATAAAAACTCAGAATGGAGGCAGTCCTaGAGCCCACTAGCCATGTGT +
Preference number: 4 (lower is better)
Translates to: MDQGNPLKTICHSEDKNSEWRQS*SPLAMC
Trigger: ACACATGGCTAGTGGGCTGCAGGACTGCCTCCATTC...TGAGTTTTTATCTTCTGAATGACAGATTGTCTTTAAAGGGTTGCCCTGGTCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR GCA 90 bp CATCCGTCACTTTCAGACACTGGAGCAGTTTCAGAGCCAGCTGCGTTTGAAAAATATGAGGGTAGCATCTaGAATGCTACAGAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: HPSLSDTGAVSEPAAFEKYEGSI*NATEKF
Trigger: GAACTTCTCTGTAGCATTGCAGATGCTACCCTCATA...TTTTTCAAACGCAGCTGGCTCTGAAACTGCTCCAGTGTCTGAAAGTGACGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR GCA 90 bp ACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAACCAATAAACATGACTaGAGAAGCCTGGACAAAGAG +
Preference number: 4 (lower is better)
Translates to: TAGFNFSSPVDDCQLQGVTNKHD*RSLDKE
Trigger: CTCTTTGTCCAGGCTTCTGCAGTCATGTTTATTGGT...TACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TATGAGGGTAGCATCTGCAATGCTACAGAGAAGTTCTATGAGATGAGCTTGTCGACAAGCCTGCACATGTaGAGAACATATCAATCGCCG +
Preference number: 4 (lower is better)
Translates to: YEGSICNATEKFYEMSLSTSLHM*RTYQSP
Trigger: CGGCGATTGATATGTTCTGCACATGTGCAGGCTTGT...CGACAAGCTCATCTCATAGAACTTCTCTGTAGCATTGCAGATGCTACCCTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR GCA 90 bp TGGGAAAGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACACAAAGCATGTTTCTGTaGTCTTCTACTGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: WERRGSTLCREVARLQVTQSMFL*SSTDSQ
Trigger: CTGGCTGTCAGTAGAAGAGCACAGAAACATGCTTTG...TGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCTTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp CCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGGTGAGCTTCAAGAGCTaGTTCTTTACATTCCTCATT +
Preference number: 4 (lower is better)
Translates to: PQLDGVGVSPVLSLMGKKVSFKS*FFTFLI
Trigger: AATGAGGAATGTAAAGAAGCAGCTCTTGAAGCTCAC...CTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGGTGAGCTTCAAGAGCTaGTTCTTTACATTCCTCATT +
Preference number: 4 (lower is better)
Translates to: SSGNSCYTQLASTLAPLLVSFKS*FFTFLI
Trigger: AATGAGGAATGTAAAGAAGCAGCTCTTGAAGCTCAC...CAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp GAGTCATCAAGAAGTGAAGCCACTGTTGGACTACAGCATAAATGTGTTTTGCTCACAGCATCAGAGAGTTaGTCACGGCTCCTCTATGTG +
Preference number: 4 (lower is better)
Translates to: ESSRSEATVGLQHKCVLLTASES*SRLLYV
Trigger: CACATAGAGGAGCCGTGAGCAACTCTCTGATGCTGT...GAGCAAAACACATTTATGCTGTAGTCCAACAGTGGCTTCACTTCTTGATGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp GCACCAGCTTTCCTCAGGAGCATGGCCAGAAGATTAAATAAATGTGTCCATGTGACTCCTTTACAGTCATaGGACAAGGCCAGGTTTGAA +
Preference number: 4 (lower is better)
Translates to: APAFLRSMARRLNKCVHVTPLQS*DKARFE
Trigger: TTCAAACCTGGCCTTGTCGCATGACTGTAAAGGAGT...CACATGGACACATTTATTTAATCTTCTGGCCATGCTCCTGAGGAAAGCTGGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp CCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGCTCAGAATCATTTGTTaGCCATCTTCTCCAGATGAT +
Preference number: 4 (lower is better)
Translates to: PQLDGVGVSPVLSLMGKKLRIIC*PSSPDD
Trigger: ATCATCTGGAGAAGATGGGCAACAAATGATTCTGAG...CTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCCTCAGAATCATTTGTTaGCCATCTTCTCCAGATGAT +
Preference number: 4 (lower is better)
Translates to: CYTQLASTLAPLLMTVSFLRIIC*PSSPDD
Trigger: ATCATCTGGAGAAGATGGGCAACAAATGATTCTGAG...GAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp AAAAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGAGGCAATAAAGGGCTaGTCTTGTGCTTGTATTTGC +
Preference number: 4 (lower is better)
Translates to: KRHRKLSAAITSGELPQLEAIKG*SCACIC
Trigger: GCAAATACAAGCACAAGAGCAGCCCTTTATTGCCTC...CAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp AGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCGATCTTGGGTTTATTTaGAGGACTGAAGCAAACATT +
Preference number: 4 (lower is better)
Translates to: SCYTQLASTLAPLLMTVSDLGFI*RTEANI
Trigger: AATGTTTGCTTCAGTCCTGCAAATAAACCCAAGATC...GCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp GCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGGATCTTGGGTTTATTTaGAGGACTGAAGCAAACATT +
Preference number: 4 (lower is better)
Translates to: AQKVVSCYYFWRAATTGRDLGFI*RTEANI
Trigger: AATGTTTGCTTCAGTCCTGCAAATAAACCCAAGATC...CCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp GCTGAGCTAAATTTGAACCCAGGCTTATACAGCCCCAACTCTATTTCTTTCTTCTTACTTCTGGAGAGCTaGCACAACTGGACGGTGTTG +
Preference number: 4 (lower is better)
Translates to: AELNLNPGLYSPNSISFFLLLES*HNWTVL
Trigger: CAACACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAA...GAAGAAAGAAATAGAGTTGGGGCTGTATAAGCCTGGGTTCAAATTTAGCTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578780.2
ENST00000639487.1
ENST00000640769.2
CDS-3UTR GCA 90 bp AGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTACAGAAAGTTGTCAGCTaGTATTACTTCTGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: RGSTSSGNSCYTQLASTLQKVVS*YYFWRA
Trigger: AGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTG...TAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp AAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACAGAAAGTTGTCAGCTaGTATTACTTCTGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: KAQKVVSCYYFWRAATTGQKVVS*YYFWRA
Trigger: AGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTG...TCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCTCTACTCCTTGTCTTTaGTCATTCTTAGTGGTCAGT +
Preference number: 4 (lower is better)
Translates to: CYTQLASTLAPLLMTVSFSTPCL*SFLVVS
Trigger: ACTGACCACTAAGAATGAGCAAAGACAAGGAGTAGA...GAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679113.1
CDS-3UTR CCA 90 bp AAATCAGTAACTCTGGAGAGAACTCTGGCGTCTATTAGAGGACGCTTTGTATCAAGTCTGATTTACCACTaGTCGTGGCGGCACTTCCAT +
Preference number: 4 (lower is better)
Translates to: KSVTLERTLASIRGRFVSSLIYH*SWRHFH
Trigger: ATGGAAGTGCCGCCACGACCAGTGGTAAATCAGACT...TGATACAAAGCGTCCTCTAATAGACGCCAGAGTTCTCTCCAGAGTTACTGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR CCA 90 bp GCTGAGCTAAATTTGAACCCAGGCTTATACAGCCCCAACTCTATTTCTTTCTTCAGTCTGATTTACCACTaGTCGTGGCGGCACTTCCAT +
Preference number: 4 (lower is better)
Translates to: AELNLNPGLYSPNSISFFSLIYH*SWRHFH
Trigger: ATGGAAGTGCCGCCACGACCAGTGGTAAATCAGACT...GAAGAAAGAAATAGAGTTGGGGCTGTATAAGCCTGGGTTCAAATTTAGCTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640769.2
CDS-3UTR CCA 90 bp AGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGGACAAAGAAGAATTTTaGGAAACTGTGTCGTGTTTA +
Preference number: 4 (lower is better)
Translates to: RAATTGRCWSITSSLSHGDKEEF*ETVSCL
Trigger: TAAACACGACACAGTTTCCCAAAATTCTTCTTTGTC...CCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CCA 90 bp AAATCAGTAACTCTGGAGAGAACTCTGGCGTCTATTAGAGGACGCTTTGTATCAATGGAGACACAAAACTaGGGAAGACTGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: KSVTLERTLASIRGRFVSMETQN*GRLSCW
Trigger: CCAGCAGCTCAGTCTTCCCCAGTTTTGTGTCTCCAT...TGATACAAAGCGTCCTCTAATAGACGCCAGAGTTCTCTCCAGAGTTACTGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR CCA 90 bp CTTTCCAGACAGGCAGCAAGCACAGTAATGACTTTTTCATTAGCCAGGATCTTGCACAAGCATCACCTCTaGCTGCTCCAAACTGATACT +
Preference number: 4 (lower is better)
Translates to: LSRQAASTVMTFSLARILHKHHL*LLQTDT
Trigger: AGTATCAGTTTGGAGCAGCCAGAGGTGATGCTTGTG...CAAGATCCTGGCTAATGAAAAAGTCATTACTGTGCTTGCTGCCTGTCTGGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CCA 90 bp TGGGAAAGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACAATAAAGGCCATTCTGTaGTGCACAAGCATCACCTCT +
Preference number: 4 (lower is better)
Translates to: WERRGSTLCREVARLQVTIKAIL*CTSITS
Trigger: AGAGGTGATGCTTGTGCACCACAGAATGGCCTTTAT...TGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCTTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CCA 90 bp CAGACACTGGAGCAGTTTCAGAGCCAGCTGCGTTTGAAAAACGTAAAGAAGTTCTTCAGCTTTCACTCGTaGCAATGGGTGAGACAACAT +
Preference number: 4 (lower is better)
Translates to: QTLEQFQSQLRLKNVKKFFSFHS*QWVRQH
Trigger: ATGTTGTCTCACCCATTGCCACGAGTGAAAGCTGAA...GAACTTCTTTACGTTTTTCAAACGCAGCTGGCTCTGAAACTGCTCCAGTGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CCA 90 bp ACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGGGTTTAGTGACATTATaGACACCTAAACATTCCTTC +
Preference number: 4 (lower is better)
Translates to: TSSGNSCYTQLASTLAPLGLVTL*TPKHSF
Trigger: GAAGGAATGTTTAGGTGTCCATAATGTCACTAAACC...CAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CCA 90 bp ACTGGATCACCACATAAAACCTTCCTCAAGAGTGTGAGGCATGGTTGTACCAAAGCAGGTATAACAGAATaGCCTTGGCAGCAGTGTTCA +
Preference number: 4 (lower is better)
Translates to: TGSPHKTFLKSVRHGCTKAGITE*PWQQCS
Trigger: TGAACACTGCTGCCAAGGCCATTCTGTTATACCTGC...TTTGGTACAACCATGCCTCACACTCTTGAGGAAGGTTTTATGTGGTGATCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR CCA 90 bp CACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGGCAAACTGAAGACCGATaGCAAAGAAGGTTTATTGGA +
Preference number: 4 (lower is better)
Translates to: HNWTVLEYHQFSLSWERRQTEDR*QRRFIG
Trigger: TCCAATAAACCTTCTTTGCCATCGGTCTTCAGTTTG...CCTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp TGGGAAGCCAACTTTAGGATACACAGCATCAGAGAGTTGCTCACGGCTCCTCTACAAACTGAAGACCGATaGCAAAGAAGGTTTATTGGA +
Preference number: 4 (lower is better)
Translates to: WEANFRIHSIRELLTAPLQTEDR*QRRFIG
Trigger: TCCAATAAACCTTCTTTGCCATCGGTCTTCAGTTTG...TAGAGGAGCCGTGAGCAACTCTCTGATGCTGTGTATCCTAAAGTTGGCTTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CCA 90 bp GCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCAATAAGGGCAAAACTATaGAGTAAGGACTCACAGCAT +
Preference number: 4 (lower is better)
Translates to: AGFNFSSPVDDCQLQGVAIRAKL*SKDSQH
Trigger: ATGCTGTGAGTCCTTACTCCATAGTTTTGCCCTTAT...TGCTACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000679113.1
CDS-3UTR CCA 90 bp TACTCCCCAATGAAGGTGCCACCGTTGTTTCTGAGGTGGAGAGAGAACTTGGATATACTACATTCTGACTaGTCCAGAAGAATGTTCACC +
Preference number: 4 (lower is better)
Translates to: YSPMKVPPLFLRWRENLDILHSD*SRRMFT
Trigger: GGTGAACATTCTTCTGGACCAGTCAGAATGTAGTAT...ATCCAAGTTCTCTCTCCACCTCAGAAACAACGGTGGCACCTTCATTGGGGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
ENST00000679113.1
CDS-3UTR CCA 90 bp CCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGATACTACATTCTGACTaGTCCAGAAGAATGTTCACC +
Preference number: 4 (lower is better)
Translates to: PQLDGVGVSPVLSLMGKKILHSD*SRRMFT
Trigger: GGTGAACATTCTTCTGGACCAGTCAGAATGTAGTAT...CTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp TGGGAAAGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACACTGACTTGTCCTAGATaGAGCCCTCCAAAACTTGAA +
Preference number: 4 (lower is better)
Translates to: WERRGSTLCREVARLQVTLTCPR*SPPKLE
Trigger: TTCAAGTTTTGGAGGGCTCCATCTAGGACAAGTCAG...TGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCTTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp GGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGAGAACTGCAACCATTTaGAAAATTTGCAGTATAGAC +
Preference number: 4 (lower is better)
Translates to: GELPQLDGVGVSPVLSLMRTATI*KICSID
Trigger: GTCTATACTGCAAATTTTCCAAATGGTTGCAGTTCT...CATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
CDS-3UTR CCA 90 bp AGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAGAACTGCAACCATTTaGAAAATTTGCAGTATAGAC +
Preference number: 4 (lower is better)
Translates to: RAATTGRCWSITSSLSHGRTATI*KICSID
Trigger: GTCTATACTGCAAATTTTCCAAATGGTTGCAGTTCT...CCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
CDS-3UTR CCA 90 bp CAAGCCTCAGAATCATTTGTTGCCCATCTTCTCCAGATGATATATTCAGGAGTACGTGGTGTTCTCCAGTaGCATCTGGGAAGCCAACTT +
Preference number: 4 (lower is better)
Translates to: QASESFVAHLLQMIYSGVRGVLQ*HLGSQL
Trigger: AAGTTGGCTTCCCAGATGCCACTGGAGAACACCACG...TACTCCTGAATATATCATCTGGAGAAGATGGGCAACAAATGATTCTGAGGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CCA 90 bp AGGTCAATGCTGTCATCATCAATCGTCCCTGAAGCAGGTATAACAGAATGGCCTCAGTTCTCTCTCTCATaGGAAAGAAGGGGATCAACA +
Preference number: 4 (lower is better)
Translates to: RSMLSSSIVPEAGITEWPQFSLS*ERRGST
Trigger: TGTTGATCCCCTTCTTTCCCATGAGAGAGAGAACTG...AGGCCATTCTGTTATACCTGCTTCAGGGACGATTGATGATGACAGCATTGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581161.5
CDS-3UTR CCA 90 bp TTTTTCACTAGCAAAAGTCGCAGCATGGACTTTAATCGGGTAGTACACGGAAGCATAACAGAATGGCCTTaGCAGCAGTGTTCACCTGCT +
Preference number: 4 (lower is better)
Translates to: FFTSKSRSMDFNRVVHGSITEWP*QQCSPA
Trigger: AGCAGGTGAACACTGCTGCCAAGGCCATTCTGTTAT...GCTTCCGTGTACTACCCGATTAAAGTCCATGCTGCGACTTTTGCTAGTGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638251.1
3UTR CAA 72 bp GGCCTTGGCAGCAGTGTTCACCTCACTTTCGGGCTCTaGAATGCCAAATACAGAGATTTCATACAGAACTTT +
Preference number: 4 (lower is better)
Translates to: GLGSSVHLTFGL*NAKYRDFIQNF
Trigger: AAAGTTCTGTATGAAATCTCTGTATTTGGCATTCAAGAGCCCGAAAGTGAGGTGAACACTGCTGCCAAGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581161.5
3UTR CAA 72 bp TTTCAGACACTGGAGCAGTTTCAGAGCCAGCTGCGTTaGAAAAACGTAAAGAAGTTCCGAGCATTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: FQTLEQFQSQLR*KNVKKFRAFPV
Trigger: GACAGGAAATGCTCGGAACTTCTTTACGTTTTTCAAACGCAGCTGGCTCTGAAACTGCTCCAGTGTCTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
3UTR CAA 72 bp AGTGAAGCCACTGTTGGACTACAGCATAAATGTGTTTaGCTCTTAGCCTGGAGATGCCCTTTTGCTTCTTCG +
Preference number: 4 (lower is better)
Translates to: SEATVGLQHKCV*LLAWRCPFASS
Trigger: CGAAGAAGCAAAAGGGCATCTCCAGGCTAAGAGCAAAACACATTTATGCTGTAGTCCAACAGTGGCTTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCATTTGACAATTCAGTTTaGTTGGTTTGGTATGAGGCA +
Preference number: 4 (lower is better)
Translates to: AGFNFSSPVDDCQLQGVAFDNSV*LVWYEA
Trigger: TGCCTCATACCAAACCAATCAAACTGAATTGTCAAA...TGCTACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000640769.2
CDS-3UTR TCA 90 bp AAATGTTCTGACAACTGTTTGCTAAGGCCACACAGCCCGTTTCAAGGGTGGTCAAAACCTGGATCTCGGTaGAAGTTAAGTCTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: KCSDNCLLRPHSPFQGWSKPGSR*KLSLFL
Trigger: AAGAAACAGACTTAACTTTCACCGAGATCCAGGTTT...TGACCACCCTTGAAACGGGCTGTGTGGCCTTAGCAAACAGTTGTCAGAACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp CTTTCCAGACAGGCAGCAAGCACAGTAATGACTTTTTCATTAGCCAGGATCTTGAGTAATGGACTGGCCTaGGCAGATTTCCAGATCTTT +
Preference number: 4 (lower is better)
Translates to: LSRQAASTVMTFSLARILSNGLA*ADFQIF
Trigger: AAAGATCTGGAAATCTGCTCAGGCCAGTCCATTACT...CAAGATCCTGGCTAATGAAAAAGTCATTACTGTGCTTGCTGCCTGTCTGGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR TCA 90 bp CTCCTTGTAGTAATGGACTGGCCTGAGCAGATTTCCAGATCTTTGAACAAATGCCTAAACATTCCTTCGTaGTTTCCAGACAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: LLVVMDWPEQISRSLNKCLNIPS*FPDSSG
Trigger: ACCACTGCTGTCTGGAAATCACGAAGGAATGTTTAG...GCATTTGTTCAAAGATCTGGAAATCTGCTCAGGCCAGTCCATTACTACAAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581161.5
CDS-3UTR TCA 90 bp AAAAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGAATTCCATTGCAAAGTaGAGACACGGGTTTAGTGAC +
Preference number: 4 (lower is better)
Translates to: KRHRKLSAAITSGELPQLNSIAK*RHGFSD
Trigger: GTCACTAAACCCGTGTCTTCACTTTGCAATGGAATT...CAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR TCA 90 bp CAGACACTGGAGCAGTTTCAGAGCCAGCTGCGTTTGAAAAACGTAAAGAAGTTCTGGTGTCCAATTACATaGACAGGTAGATGGTACCTT +
Preference number: 4 (lower is better)
Translates to: QTLEQFQSQLRLKNVKKFWCPIT*TGRWYL
Trigger: AAGGTACCATCTACCTGTTCATGTAATTGGACACCA...GAACTTCTTTACGTTTTTCAAACGCAGCTGGCTCTGAAACTGCTCCAGTGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp AGCCTCAGAATCATTTGTTGCCCATCTTCTCCAGATGATATATTCAGGAGTAACTATCTAGAGGCTTTGTaGGAGGAGAGTGTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: SLRIICCPSSPDDIFRSNYLEAL*EESVSS
Trigger: GGAGCTCACACTCTCCTCTCACAAAGCCTCTAGATA...GTTACTCCTGAATATATCATCTGGAGAAGATGGGCAACAAATGATTCTGAGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp TATCACTCCCATGATACCATGACAGGTTCCAAGCTATTCTCAGCATATCTGACAGACCTCAAGGAGACCTaGCAAGTACTTCACACAGAT +
Preference number: 4 (lower is better)
Translates to: YHSHDTMTGSKLFSAYLTDLKET*QVLHTD
Trigger: ATCTGTGTGAAGTACTTGTCAGGTCTCCTTGAGGTC...TGTCAGATATGCTGAGAATAGCTTGGAACCTGTCATGGTATCATGGGAGTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp ACTCTGGCGTCTATTAGAGGACGCTTTGTATCAGCCCCTTCTTCACTGGTAAGAATCTCATGGGATAAGTaGAGCAAGCAAAGAATTGTG +
Preference number: 4 (lower is better)
Translates to: TLASIRGRFVSAPSSLVRISWDK*SKQRIV
Trigger: CACAATTCTTTGCTTGCTTCACTTATCCCATGAGAT...TCTTACCAGTGAAGAAGGGGCTGATACAAAGCGTCCTCTAATAGACGCCAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR TCA 90 bp AGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAATATGTTCTTCACTATaGCTACCCAAAGGCAAGAAC +
Preference number: 4 (lower is better)
Translates to: RGSTSSGNSCYTQLASTLICSSL*LPKGKN
Trigger: GTTCTTGCCTTTGGGTAGTCATAGTGAAGAACATAT...TAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp CTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAACAAGCCAATCCTTGTTaGGTAGGAATATGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LHTAGFNFSSPVDDCQLQQANPC*VGICSS
Trigger: TGAAGAACATATTCCTACTCAACAAGGATTGGCTTG...TTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp AGCCTCAGAATCATTTGTTGCCCATCTTCTCCAGATGATATATTCAGGAGTAACCCACCGGAAATGTTCTaGCAACTGTTTGCTAAGGCC +
Preference number: 4 (lower is better)
Translates to: SLRIICCPSSPDDIFRSNPPEMF*QLFAKA
Trigger: GGCCTTAGCAAACAGTTGTCAGAACATTTCCGGTGG...GTTACTCCTGAATATATCATCTGGAGAAGATGGGCAACAAATGATTCTGAGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp TGGGAAAGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACACACCATACTACATTCTaGCTGGTCCAGAAGAATGTT +
Preference number: 4 (lower is better)
Translates to: WERRGSTLCREVARLQVTHHTTF*LVQKNV
Trigger: AACATTCTTCTGGACCAGTCAGAATGTAGTATGGTG...TGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCTTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp TTTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAACCAGAGTCCTCATCATaGACACAGGGACCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: FMFPELSMPFQQKGKGTEPESSS*TQGPCQ
Trigger: TTGGCAGGGTCCCTGTGTTCATGATGAGGACTCTGG...TTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
CDS-3UTR TCA 90 bp TTCTTGCGTTTTAGTTTCAGAGTTCATTTGCTTCAACAGATTATCACTCCCATGGGGCAGGTTTTCCAATaGGCGATAGGCCAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: FLRFSFRVHLLQQIITPMGQVFQ*AIGQSP
Trigger: AGGACTCTGGCCTATCGCTCATTGGAAAACCTGCCC...CATGGGAGTGATAATCTGTTGAAGCAAATGAACTCTGAAACTAAAACGCAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp AATGCACACTTACTTCTACATAGCCCTTTTCCAGTGTGGATGCTCTGGATAACAGAAAGAGATGAATCATaGGGTGGCCGTGGTGATGTA +
Preference number: 4 (lower is better)
Translates to: NAHLLLHSPFPVWMLWITERDES*GGRGDV
Trigger: TACATCACCACGGCCACCTCATGATTCATCTCTTTC...TGTTATCCAGAGCATCCACACTGGAAAAGGGCTATGTAGAAGTAAGTGTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640769.2
CDS-3UTR TCA 90 bp GTTTCTTCTCGTGCCTGTGACTCTGTCAGAACCAAGAGGTCTAACAGTGGGTTTAGAAGTTCTATGAGATaGGCTTGTCGAAAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: VSSRACDSVRTKRSNSGFRSSMR*ACRKAF
Trigger: AAAGGCTTTTCGACAAGCTCATCTCATAGAACTTCT...AAACCCACTGTTAGACCTCTTGGTTCTGACAGAGTCACAGGCACGAGAAGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR TCA 90 bp AGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAAGAAGTTCTATGAGATaGGCTTGTCGAAAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: RGSTSSGNSCYTQLASTLRSSMR*ACRKAF
Trigger: AAAGGCTTTTCGACAAGCTCATCTCATAGAACTTCT...TAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp TCTTGTGCTTGTATTTGCTCATCTCTGTTAGTAAGTCTAGACAGCCATCAAGCCCCTCTATGTGTAGCTTaGACAGGGTGTTGTCCACAA +
Preference number: 4 (lower is better)
Translates to: SCACICSSLLVSLDSHQAPLCVA*TGCCPQ
Trigger: TTGTGGACAACACCCTGTTCAAGCTACACATAGAGG...GGCTTGATGGCTGTCTAGACTTACTAACAGAGATGAGCAAATACAAGCACAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR TCA 90 bp AGCAATCAGTTCTTTCTGAAGTTGTTGCCTGACAGCAGTCCGGATATCATCTGTATAAAAACCATCTGCTaGACCGTGGTGTTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SNQFFLKLLPDSSPDIICIKTIC*TVVFSS
Trigger: ACTGGAGAACACCACGGTTCAGCAGATGGTTTTTAT...ACAGATGATATCCGGACTGCTGTCAGGCAACAACTTCAGAAAGAACTGATTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR TCA 90 bp GTTACTTCTGAATTACTCCTTTACAGTCATGCGACAAGGCCAGGTTTGAAAGAACCTCTGAGTATTAGATaGGTTGGTCCTGGAAGCCGA +
Preference number: 4 (lower is better)
Translates to: VTSELLLYSHATRPGLKEPLSIR*VGPGSR
Trigger: TCGGCTTCCAGGACCAACTCATCTAATACTCAGAGG...TTCTTTCAAACCTGGCCTTGTCGCATGACTGTAAAGGAGTAATTCAGAAGTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679113.1
CDS-3UTR GCA 90 bp CAAGCCTCAGAATCATTTGTTGCCCATCTTCTCCAGATGATATATTCAGGAGTATGTAATGCCAGGCGATaGTTTCCATCTCCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: QASESFVAHLLQMIYSGVCNARR*FPSPKA
Trigger: GGCCTTTGGAGATGGAAAGCATCGCCTGGCATTACA...TACTCCTGAATATATCATCTGGAGAAGATGGGCAACAAATGATTCTGAGGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR GCA 90 bp GGTGAAGATTTCATATACCTTTTCAACAGTCTCCAACTTAATAACCAGCTCTCTTACATGCACAGCTGCTaGAGGCAGGACACCGACTGT +
Preference number: 4 (lower is better)
Translates to: GEDFIYLFNSLQLNNQLSYMHSC*RQDTDC
Trigger: ACAGTCGGTGTCCTGCCTGCAGCAGCTGTGCATGTA...AGAGAGCTGGTTATTAAGTTGGAGACTGTTGAAAAGGTATATGAAATCTTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR GCA 90 bp CTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGATGATGAGTACCTCTTaGTTCATGACAATAAGACAA +
Preference number: 4 (lower is better)
Translates to: LPQLDGVGVSPVLSLMGKMMSTS*FMTIRQ
Trigger: TTGTCTTATTGTCATGAAGCAAGAGGTACTCATCAT...CTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR GCA 90 bp GGCGCACCATACTACATTCTGACTGGTCCAGAAGAATGTTCACCACAGTTCCCCATGATGAGTACCTCTTaGTTCATGACAATAAGACAA +
Preference number: 4 (lower is better)
Translates to: GAPYYILTGPEECSPQFPMMSTS*FMTIRQ
Trigger: TTGTCTTATTGTCATGAAGCAAGAGGTACTCATCAT...GGGGAACTGTGGTGAACATTCTTCTGGACCAGTCAGAATGTAGTATGGTGCGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR GCA 90 bp AGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCATGATGAGTACCTCTTaGTTCATGACAATAAGACAA +
Preference number: 4 (lower is better)
Translates to: SCYTQLASTLAPLLMTVSMMSTS*FMTIRQ
Trigger: TTGTCTTATTGTCATGAAGCAAGAGGTACTCATCAT...GCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR GCA 90 bp AAGCTGTTTTTGCCTTCTGATAATTGTAAATCAGAGCCCAAAGGGCAGCTGCTCTGGGGAAGACTGAGCTaGTGGAATTGTAGTTCCAAT +
Preference number: 4 (lower is better)
Translates to: KLFLPSDNCKSEPKGQLLWGRLS*WNCSSN
Trigger: ATTGGAACTACAATTCCAGCAGCTCAGTCTTCCCCA...GAGCAGCTGCCCTTTGGGCTCTGATTTACAATTATCAGAAGGCAAAAACAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR GCA 90 bp AGCAATCAGTTCTTTCTGAAGTTGTTGCCTGACAGCAGTCCGGATATCATCTGTAGCATCACCTCTGGCTaGTCCAAACTGATACTACTT +
Preference number: 4 (lower is better)
Translates to: SNQFFLKLLPDSSPDIICSITSG*SKLILL
Trigger: AAGTAGTATCAGTTTGGAGCAGCCAGAGGTGATGCT...ACAGATGATATCCGGACTGCTGTCAGGCAACAACTTCAGAAAGAACTGATTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR GCA 90 bp TGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAAACAGGAAGTTACAGGTaGATTCAATTGAATAAACGG +
Preference number: 4 (lower is better)
Translates to: CREVARLQVTAATHSWLQTGSYR*IQLNKR
Trigger: CCGTTTATTCAATTGAATGCACCTGTAACTTCCTGT...TTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR GCA 90 bp TCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGACAGGAAGTTACAGGTaGATTCAATTGAATAAACGG +
Preference number: 4 (lower is better)
Translates to: SSGNSCYTQLASTLAPLLTGSYR*IQLNKR
Trigger: CCGTTTATTCAATTGAATGCACCTGTAACTTCCTGT...CAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR GCA 90 bp TGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCTTTCGGGCTCTTGAATaGCAAATACAGAGATTTCAT +
Preference number: 4 (lower is better)
Translates to: CYTQLASTLAPLLMTVSFFRALE*QIQRFH
Trigger: ATGAAATCTCTGTATTTGGCATTCAAGAGCCCGAAA...GAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR GCA 90 bp CACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGGTTTCGGGCTCTTGAATaGCAAATACAGAGATTTCAT +
Preference number: 4 (lower is better)
Translates to: HNWTVLEYHQFSLSWERRFRALE*QIQRFH
Trigger: ATGAAATCTCTGTATTTGGCATTCAAGAGCCCGAAA...CCTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR GCA 90 bp GTGCCTGTGACTCTGTCAGAACCAAGAGGTCTAACAGTGGGTTTGCACTATGTCTTTCGGGCTCTTGAATaGCAAATACAGAGATTTCAT +
Preference number: 4 (lower is better)
Translates to: VPVTLSEPRGLTVGLHYVFRALE*QIQRFH
Trigger: ATGAAATCTCTGTATTTGGCATTCAAGAGCCCGAAA...GACATAGTGCAAACCCACTGTTAGACCTCTTGGTTCTGACAGAGTCACAGGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR GCA 90 bp GAAGAATGTTCACCACAGTTCCCCAGAGCCCACCGGAAATGTTCTGACAACTGTTTTCGGGCTCTTGAATaGCAAATACAGAGATTTCAT +
Preference number: 4 (lower is better)
Translates to: EECSPQFPRAHRKCSDNCFRALE*QIQRFH
Trigger: ATGAAATCTCTGTATTTGGCATTCAAGAGCCCGAAA...ACAGTTGTCAGAACATTTCCGGTGGGCTCTGGGGAACTGTGGTGAACATTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR GCA 90 bp CACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGTTTTCGGGCTCTTGAATaGCAAATACAGAGATTTCAT +
Preference number: 4 (lower is better)
Translates to: HRKLSAAITSGELPQLDGFRALE*QIQRFH
Trigger: ATGAAATCTCTGTATTTGGCATTCAAGAGCCCGAAA...ACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR GCA 90 bp CCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGAACATTCTACAACCTTaGCATCTTGACTCACACATT +
Preference number: 4 (lower is better)
Translates to: PQLDGVGVSPVLSLMGKKNILQP*HLDSHI
Trigger: AATGTGTGAGTCAAGATGGCAAGGTTGTAGAATGTT...CTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000640769.2
ENST00000677824.1
CDS-3UTR GCA 90 bp ATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGGCTTTCAAAGCATGTGAATGGAGGCAGTCCTaGAGCCCACTAGCCATGTGT +
Preference number: 4 (lower is better)
Translates to: MCFICSMQLSIRLAFKACEWRQS*SPLAMC
Trigger: ACACATGGCTAGTGGGCTGCAGGACTGCCTCCATTC...ACATGCTTTGAAAGCCAATCTTATAGACAATTGCATGGAGCAGATGAAACACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR GCA 90 bp AAGCTGTTTTTGCCTTCTGATAATTGTAAATCAGAGCCCAAAGGGCAGCTGCTCTTGTCGAAAAGCCTTTaGAGTGTCTCTGGGAGCAAT +
Preference number: 4 (lower is better)
Translates to: KLFLPSDNCKSEPKGQLLLSKSL*SVSGSN
Trigger: ATTGCTCCCAGAGACACTGCAAAGGCTTTTCGACAA...GAGCAGCTGCCCTTTGGGCTCTGATTTACAATTATCAGAAGGCAAAAACAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp AAAAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGTATGAGGGTAGCATCTaGAATGCTACAGAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: KRHRKLSAAITSGELPQLYEGSI*NATEKF
Trigger: GAACTTCTCTGTAGCATTGCAGATGCTACCCTCATA...CAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp AAAAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGACCAATAAACATGACTaGAGAAGCCTGGACAAAGAG +
Preference number: 4 (lower is better)
Translates to: KRHRKLSAAITSGELPQLTNKHD*RSLDKE
Trigger: CTCTTTGTCCAGGCTTCTGCAGTCATGTTTATTGGT...CAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp CAGCCAGCAGTGACATCAATGCATTTGCAGCTACTCTTTTCAGGATATCTTTGGCAAAGCATGTTTCTGTaGTCTTCTACTGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: QPAVTSMHLQLLFSGYLWQSMFL*SSTDSQ
Trigger: CTGGCTGTCAGTAGAAGAGCACAGAAACATGCTTTG...CCAAAGATATCCTGAAAAGAGTAGCTGCAAATGCATTGATGTCACTGCTGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAAAGCTGCAGAGAAATTTaGATCAATGAATCATCCATC +
Preference number: 4 (lower is better)
Translates to: CREVARLQVTAATHSWLQSCREI*INESSI
Trigger: GATGGATGATTCATTGATGCAAATTTCTCTGCAGCT...TTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp CACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGTAGCTGCAGAGAAATTTaGATCAATGAATCATCCATC +
Preference number: 4 (lower is better)
Translates to: HRKLSAAITSGELPQLDGSCREI*INESSI
Trigger: GATGGATGATTCATTGATGCAAATTTCTCTGCAGCT...ACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp ACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGACCATTTGGAAAATTTaGAGTATAGACACAAAGGAG +
Preference number: 4 (lower is better)
Translates to: TSSGNSCYTQLASTLAPLTIWKI*SIDTKE
Trigger: CTCCTTTGTGTCTATACTGCAAATTTTCCAAATGGT...CAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
CDS-3UTR GCA 90 bp GCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAACCATTTGGAAAATTTaGAGTATAGACACAAAGGAG +
Preference number: 4 (lower is better)
Translates to: AATTGRCWSITSSLSHGKTIWKI*SIDTKE
Trigger: CTCCTTTGTGTCTATACTGCAAATTTTCCAAATGGT...TTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
CDS-3UTR GCA 90 bp CTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGTCTTGTGCTTGTATTTaGTCATCTCTGTTAGTAAGT +
Preference number: 4 (lower is better)
Translates to: LPQLDGVGVSPVLSLMGKSCACI*SSLLVS
Trigger: ACTTACTAACAGAGATGAGCAAATACAAGCACAAGA...CTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp ACAAACGGGAGTGTGATGGCACCAGCTTTCCTCAGGAGCATGGCCAGAAGATTATCTTGTGCTTGTATTTaGTCATCTCTGTTAGTAAGT +
Preference number: 4 (lower is better)
Translates to: TNGSVMAPAFLRSMARRLSCACI*SSLLVS
Trigger: ACTTACTAACAGAGATGAGCAAATACAAGCACAAGA...TAATCTTCTGGCCATGCTCCTGAGGAAAGCTGGTGCCATCACACTCCCGTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TATGAGGGTAGCATCTGCAATGCTACAGAGAAGTTCTATGAGATGAGCTTGTCGGAGGCAATAAAGGGCTaGTCTTGTGCTTGTATTTGC +
Preference number: 4 (lower is better)
Translates to: YEGSICNATEKFYEMSLSEAIKG*SCACIC
Trigger: GCAAATACAAGCACAAGAGCAGCCCTTTATTGCCTC...CGACAAGCTCATCTCATAGAACTTCTCTGTAGCATTGCAGATGCTACCCTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR GCA 90 bp AAGCTGTTTTTGCCTTCTGATAATTGTAAATCAGAGCCCAAAGGGCAGCTGCTCGAGGCAATAAAGGGCTaGTCTTGTGCTTGTATTTGC +
Preference number: 4 (lower is better)
Translates to: KLFLPSDNCKSEPKGQLLEAIKG*SCACIC
Trigger: GCAAATACAAGCACAAGAGCAGCCCTTTATTGCCTC...GAGCAGCTGCCCTTTGGGCTCTGATTTACAATTATCAGAAGGCAAAAACAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TGCTTGTATTTGCTCATCTCTGTTAGTAAGTCTAGACAGCCATCAAGCCTCAGATCTTCAGGTAACAGCTaGTACACACAGCTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: CLYLLISVSKSRQPSSLRSSGNS*YTQLAS
Trigger: TGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGA...TCTGAGGCTTGATGGCTGTCTAGACTTACTAACAGAGATGAGCAAATACAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp GCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCATCCCAGAACTTTCTATaGCTTTTCAACAGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: AGFNFSSPVDDCQLQGVASQNFL*LFNRKE
Trigger: TTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGA...TGCTACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp GGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCATCCTCCCAGAACTTTCTATaGCTTTTCAACAGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: GFNFSSPVDDCQLQGVASSQNFL*LFNRKE
Trigger: TTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGA...GGATGCTACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAATCCCAGAACTTTCTATaGCTTTTCAACAGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: CREVARLQVTAATHSWLQSQNFL*LFNRKE
Trigger: TTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGA...TTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp AGCAGGGCTCTGAGTTCCTGGACACATGTCTGTATGAGGGTAGCATCTGCAATGAACATTCTACAACCTTaGATAATCACAGCTAACTGT +
Preference number: 4 (lower is better)
Translates to: SRALSSWTHVCMRVASAMNILQP*IITANC
Trigger: ACAGTTAGCTGTGATTATGCAAGGTTGTAGAATGTT...CATTGCAGATGCTACCCTCATACAGACATGTGTCCAGGAACTCAGAGCCCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CCA 90 bp CACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGTACAATTCAGTTTGATTaGTTTGGTATGAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: HRKLSAAITSGELPQLDGTIQFD*FGMRQK
Trigger: CTTCTGCCTCATACCAAACCAATCAAACTGAATTGT...ACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255674.11
ENST00000640769.2
CDS-3UTR CCA 90 bp GCATCTCTTCTGTGTCAGAACTTGCTTTGCTTAGAAGGAGAATGCAGTTACCCACAGCTGATTCCAGAATaGAGACACAAAACTGGGGAA +
Preference number: 4 (lower is better)
Translates to: ASLLCQNLLCLEGECSYPQLIPE*RHKTGE
Trigger: TTCCCCAGTTTTGTGTCTCCATTCTGGAATCAGCTG...TGGGTAACTGCATTCTCCTTCTAAGCAAAGCAAGTTCTGACACAGAAGAGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR CCA 90 bp CCCTTTACAAATAATGCACACTTACTTCTACATAGCCCTTTTCCAGTGTGGATGAAGCTACGCAAGGCTTaGTCTGCCAGCTCCACTAAT +
Preference number: 4 (lower is better)
Translates to: PFTNNAHLLLHSPFPVWMKLRKA*SASSTN
Trigger: ATTAGTGGAGCTGGCAGACCAAGCCTTGCGTAGCTT...CATCCACACTGGAAAAGGGCTATGTAGAAGTAAGTGTGCATTATTTGTAAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640769.2
CDS-3UTR CCA 90 bp CACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGTGGTTTAGTGACATTATaGACACCTAAACATTCCTTC +
Preference number: 4 (lower is better)
Translates to: HRKLSAAITSGELPQLDGGLVTL*TPKHSF
Trigger: GAAGGAATGTTTAGGTGTCCATAATGTCACTAAACC...ACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CCA 90 bp ACTTTCCAGACAGGCAGCAAGCACAGTAATGACTTTTTCATTAGCCAGGATCTTGCAGGTATAACAGAATaGCCTTGGCAGCAGTGTTCA +
Preference number: 4 (lower is better)
Translates to: TFQTGSKHSNDFFISQDLAGITE*PWQQCS
Trigger: TGAACACTGCTGCCAAGGCCATTCTGTTATACCTGC...AAGATCCTGGCTAATGAAAAAGTCATTACTGTGCTTGCTGCCTGTCTGGAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CCA 90 bp CTTCTACTGACAGCCAGCAGTGACATCAATGCATTTGCAGCTACTCTTTTCAGGCAAGAGTGTGAGGCATaGTTGTACCAAACATTCTAC +
Preference number: 4 (lower is better)
Translates to: LLLTASSDINAFAATLFRQECEA*LYQTFY
Trigger: GTAGAATGTTTGGTACAACCATGCCTCACACTCTTG...CCTGAAAAGAGTAGCTGCAAATGCATTGATGTCACTGCTGGCTGTCAGTAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CCA 90 bp AAGGACTTCAAGGTAACCCCACATGGACCAGGGCAACCCTTTAAAGACAATCTGCAAACTGAAGACCGATaGCAAAGAAGGTTTATTGGA +
Preference number: 4 (lower is better)
Translates to: KDFKVTPHGPGQPFKDNLQTEDR*QRRFIG
Trigger: TCCAATAAACCTTCTTTGCCATCGGTCTTCAGTTTG...CAGATTGTCTTTAAAGGGTTGCCCTGGTCCATGTGGGGTTACCTTGAAGTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CCA 90 bp AAGGACTTCAAGGTAACCCCACATGGACCAGGGCAACCCTTTAAAGACAATCTGATAAGGGCAAAACTATaGAGTAAGGACTCACAGCAT +
Preference number: 4 (lower is better)
Translates to: KDFKVTPHGPGQPFKDNLIRAKL*SKDSQH
Trigger: ATGCTGTGAGTCCTTACTCCATAGTTTTGCCCTTAT...CAGATTGTCTTTAAAGGGTTGCCCTGGTCCATGTGGGGTTACCTTGAAGTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CCA 90 bp GACAGGTTCCAAGCTATTCTCAGCATATCTGACACCGGCTTCAAGGCCAAACAAATACTACATTCTGACTaGTCCAGAAGAATGTTCACC +
Preference number: 4 (lower is better)
Translates to: DRFQAILSISDTGFKAKQILHSD*SRRMFT
Trigger: GGTGAACATTCTTCTGGACCAGTCAGAATGTAGTAT...TTGTTTGGCCTTGAAGCCGGTGTCAGATATGCTGAGAATAGCTTGGAACCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CCA 90 bp CAGTCCTGCAGCCCACTAGCCATGTGTGTTATCTTCAGAGTGAGGATGTCCTCTAATTTCTGTAGGCATTaGAATTACAAGGAGATTCTG +
Preference number: 4 (lower is better)
Translates to: QSCSPLAMCVIFRVRMSSNFCRH*NYKEIL
Trigger: CAGAATCTCCTTGTAATTCCAATGCCTACAGAAATT...AGAGGACATCCTCACTCTGAAGATAACACACATGGCTAGTGGGCTGCAGGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CCA 90 bp ACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGAATTTCTGTAGGCATTaGAATTACAAGGAGATTCTG +
Preference number: 4 (lower is better)
Translates to: TSSGNSCYTQLASTLAPLNFCRH*NYKEIL
Trigger: CAGAATCTCCTTGTAATTCCAATGCCTACAGAAATT...CAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp TATCACTCCCATGATACCATGACAGGTTCCAAGCTATTCTCAGCATATCTGACAGGTGGAGAGAGAACTTaGATCTCGATCCTGACTTGT +
Preference number: 4 (lower is better)
Translates to: YHSHDTMTGSKLFSAYLTGGERT*ISILTC
Trigger: ACAAGTCAGGATCGAGATCCAAGTTCTCTCTCCACC...TGTCAGATATGCTGAGAATAGCTTGGAACCTGTCATGGTATCATGGGAGTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CCA 90 bp AAATCAGTAACTCTGGAGAGAACTCTGGCGTCTATTAGAGGACGCTTTGTATCAGGTGGAGAGAGAACTTaGATCTCGATCCTGACTTGT +
Preference number: 4 (lower is better)
Translates to: KSVTLERTLASIRGRFVSGGERT*ISILTC
Trigger: ACAAGTCAGGATCGAGATCCAAGTTCTCTCTCCACC...TGATACAAAGCGTCCTCTAATAGACGCCAGAGTTCTCTCCAGAGTTACTGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR CCA 90 bp GCTGAGCTAAATTTGAACCCAGGCTTATACAGCCCCAACTCTATTTCTTTCTTCGGTGGAGAGAGAACTTaGATCTCGATCCTGACTTGT +
Preference number: 4 (lower is better)
Translates to: AELNLNPGLYSPNSISFFGGERT*ISILTC
Trigger: ACAAGTCAGGATCGAGATCCAAGTTCTCTCTCCACC...GAAGAAAGAAATAGAGTTGGGGCTGTATAAGCCTGGGTTCAAATTTAGCTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640769.2
CDS-3UTR CCA 90 bp AATGCACACTTACTTCTACATAGCCCTTTTCCAGTGTGGATGCTCTGGATAACACCGTTGTTTCTGAGGTaGAGAGAGAACTTGGATCTC +
Preference number: 4 (lower is better)
Translates to: NAHLLLHSPFPVWMLWITPLFLR*RENLDL
Trigger: GAGATCCAAGTTCTCTCTCCACCTCAGAAACAACGG...TGTTATCCAGAGCATCCACACTGGAAAAGGGCTATGTAGAAGTAAGTGTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640769.2
CDS-3UTR CCA 90 bp GGCTTTTCAAAGCTGTTTTTGCCTTCTGATAATTGTAAATCAGAGCCCAAAGGGAGGGCTCTGAGTTCCTaGACACATGTCTGTATGAGG +
Preference number: 4 (lower is better)
Translates to: GFSKLFLPSDNCKSEPKGRALSS*THVCMR
Trigger: CCTCATACAGACATGTGTCCAGGAACTCAGAGCCCT...CCCTTTGGGCTCTGATTTACAATTATCAGAAGGCAAAAACAGCTTTGAAAAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CCA 90 bp TGGAGTAAGGACTCACAGCATGGTGTCCAATTACATGAACAGGTAGATGGTACCATGACTGCAGAAGCCTaGACAAAGAGGATAGGTATT +
Preference number: 4 (lower is better)
Translates to: WSKDSQHGVQLHEQVDGTMTAEA*TKRIGI
Trigger: AATACCTATCCTCTTTGTCCAGGCTTCTGCAGTCAT...GGTACCATCTACCTGTTCATGTAATTGGACACCATGCTGTGAGTCCTTACTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CCA 90 bp GCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCATTTTCAGGATATCTTTaGAGGATTTCCCTTCATAGC +
Preference number: 4 (lower is better)
Translates to: AGFNFSSPVDDCQLQGVAFSGYL*RISLHS
Trigger: GCTATGAAGGGAAATCCTCCAAAGATATCCTGAAAA...TGCTACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp AAGCTGTTTTTGCCTTCTGATAATTGTAAATCAGAGCCCAAAGGGCAGCTGCTCCAGTTCTCTCTCTCATaGGAAAGAAGGGGATCAACA +
Preference number: 4 (lower is better)
Translates to: KLFLPSDNCKSEPKGQLLQFSLS*ERRGST
Trigger: TGTTGATCCCCTTCTTTCCCATGAGAGAGAGAACTG...GAGCAGCTGCCCTTTGGGCTCTGATTTACAATTATCAGAAGGCAAAAACAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR TCA 90 bp TGGGAAAGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACAATATCCAAAGGTGAATaGACGGATATCCTGGAGTTT +
Preference number: 4 (lower is better)
Translates to: WERRGSTLCREVARLQVTISKGE*TDILEF
Trigger: AAACTCCAGGATATCCGTTCATTCACCTTTGGATAT...TGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCTTTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR TCA 90 bp GCACCAGCTTTCCTCAGGAGCATGGCCAGAAGATTAAATAAATGTGTCCATGTGATATCCAAAGGTGAATaGACGGATATCCTGGAGTTT +
Preference number: 4 (lower is better)
Translates to: APAFLRSMARRLNKCVHVISKGE*TDILEF
Trigger: AAACTCCAGGATATCCGTTCATTCACCTTTGGATAT...CACATGGACACATTTATTTAATCTTCTGGCCATGCTCCTGAGGAAAGCTGGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR TCA 90 bp GCTGAGCTAAATTTGAACCCAGGCTTATACAGCCCCAACTCTATTTCTTTCTTCAAAACTGGGGAAGACTaGGCTGCTGGAATTGTAGTT +
Preference number: 4 (lower is better)
Translates to: AELNLNPGLYSPNSISFFKTGED*AAGIVV
Trigger: AACTACAATTCCAGCAGCTCAGTCTTCCCCAGTTTT...GAAGAAAGAAATAGAGTTGGGGCTGTATAAGCCTGGGTTCAAATTTAGCTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000640769.2
CDS-3UTR TCA 90 bp TATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAAGACTCGTGGCAATGGGTaGGACAACATATGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: YVPRTFYAFSTERKRHRKTRGNG*DNIWRS
Trigger: GCTTCTCCATATGTTGTCTCACCCATTGCCACGAGT...CTTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR TCA 90 bp AAGCTGTTTTTGCCTTCTGATAATTGTAAATCAGAGCCCAAAGGGCAGCTGCTCTCACTTTCGGGCTCTTaGATGCCAAATACAGAGATT +
Preference number: 4 (lower is better)
Translates to: KLFLPSDNCKSEPKGQLLSLSGS*MPNTEI
Trigger: AATCTCTGTATTTGGCATTCAAGAGCCCGAAAGTGA...GAGCAGCTGCCCTTTGGGCTCTGATTTACAATTATCAGAAGGCAAAAACAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR TCA 90 bp TATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAAGCCTTCCTCAAGAGTGTaGGGCATGGTTGTACCAAAC +
Preference number: 4 (lower is better)
Translates to: YVPRTFYAFSTERKRHRKPSSRV*GMVVPN
Trigger: GTTTGGTACAACCATGCCTCACACTCTTGAGGAAGG...CTTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
CDS-3UTR TCA 90 bp GTTACTTCTGAATTACTCCTTTACAGTCATGCGACAAGGCCAGGTTTGAAAGAATATTCTCAGCATATCTaGCACCGGCTTCAAGGCCAA +
Preference number: 4 (lower is better)
Translates to: VTSELLLYSHATRPGLKEYSQHI*HRLQGQ
Trigger: TTGGCCTTGAAGCCGGTGTCAGATATGCTGAGAATA...TTCTTTCAAACCTGGCCTTGTCGCATGACTGTAAAGGAGTAATTCAGAAGTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679113.1
CDS-3UTR TCA 90 bp CACTTACTTCTACATAGCCCTTTTCCAGTGTGGATGCTCTGGATAACAGAAAGTACTCCCATGATACCATaGCAGGTTCCAAGCTATTCT +
Preference number: 4 (lower is better)
Translates to: HLLLHSPFPVWMLWITESTPMIP*QVPSYS
Trigger: AGAATAGCTTGGAACCTGTCATGGTATCATGGGAGT...ACTTTCTGTTATCCAGAGCATCCACACTGGAAAAGGGCTATGTAGAAGTAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640769.2
CDS-3UTR TCA 90 bp ACTGGATCACCACATAAAACCTTCCTCAAGAGTGTGAGGCATGGTTGTACCAAAAGATTATCACTCCCATaGTACCATGACAGGTTCCAA +
Preference number: 4 (lower is better)
Translates to: TGSPHKTFLKSVRHGCTKRLSLP*YHDRFQ
Trigger: TTGGAACCTGTCATGGTATCATGGGAGTGATAATCT...TTTGGTACAACCATGCCTCACACTCTTGAGGAAGGTTTTATGTGGTGATCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR TCA 90 bp TATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAAGTTCTTCTCGTGCCTGTaGCTCTGTCAGAACCAAGAG +
Preference number: 4 (lower is better)
Translates to: YVPRTFYAFSTERKRHRKFFSCL*LCQNQE
Trigger: CTCTTGGTTCTGACAGAGTCACAGGCACGAGAAGAA...CTTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GGCAATAAAGGGCTGCTCTTGTGCTTGTATTTGCTCATCTCTGTTAGTAAGTCTGCAATCAGTTCTTTCTaGAGTTGTTGCCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: GNKGLLLCLYLLISVSKSAISSF*SCCLTA
Trigger: TGCTGTCAGGCAACAACTTCAGAAAGAACTGATTGC...AGACTTACTAACAGAGATGAGCAAATACAAGCACAAGAGCAGCCCTTTATTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp CCCTTTACAAATAATGCACACTTACTTCTACATAGCCCTTTTCCAGTGTGGATGGACCTCAAGGAGACCTaGCAAGTACTTCACACAGAT +
Preference number: 4 (lower is better)
Translates to: PFTNNAHLLLHSPFPVWMDLKET*QVLHTD
Trigger: ATCTGTGTGAAGTACTTGTCAGGTCTCCTTGAGGTC...CATCCACACTGGAAAAGGGCTATGTAGAAGTAAGTGTGCATTATTTGTAAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640769.2
CDS-3UTR TCA 90 bp CTTCTACTGACAGCCAGCAGTGACATCAATGCATTTGCAGCTACTCTTTTCAGGATCTCATGGGATAAGTaGAGCAAGCAAAGAATTGTG +
Preference number: 4 (lower is better)
Translates to: LLLTASSDINAFAATLFRISWDK*SKQRIV
Trigger: CACAATTCTTTGCTTGCTTCACTTATCCCATGAGAT...CCTGAAAAGAGTAGCTGCAAATGCATTGATGTCACTGCTGGCTGTCAGTAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp AGTTGTGCATTTATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGGCTAGGCAAGAACCAAAGTaGCATCCACTCCAAGCTCCC +
Preference number: 4 (lower is better)
Translates to: SCAFMCFICSMQLSIRLARQEPK*HPLQAP
Trigger: GGGAGCTTGGAGTGGATGTCACTTTGGTTCTTGCCT...AGCCAATCTTATAGACAATTGCATGGAGCAGATGAAACACATAAATGCACAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp AGCAATCAGTTCTTTCTGAAGTTGTTGCCTGACAGCAGTCCGGATATCATCTGTGAGCCCTCCAAAACTTaGATGAGTCATCTAAACCAT +
Preference number: 4 (lower is better)
Translates to: SNQFFLKLLPDSSPDIICEPSKT*MSHLNH
Trigger: ATGGTTTAGATGACTCATTCAAGTTTTGGAGGGCTC...ACAGATGATATCCGGACTGCTGTCAGGCAACAACTTCAGAAAGAACTGATTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp TTCAGTTGTGCATTTATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGATGAGGTGGCCGTGGTaGTGTACTTTCCTGGTGACC +
Preference number: 4 (lower is better)
Translates to: FSCAFMCFICSMQLSIRLMRWPW*CTFLVT
Trigger: GGTCACCAGGAAAGTACATCACCACGGCCACCTCAT...CAATCTTATAGACAATTGCATGGAGCAGATGAAACACATAAATGCACAACTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp AAAAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGAGAAGTTCTATGAGATaGGCTTGTCGAAAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: KRHRKLSAAITSGELPQLRSSMR*ACRKAF
Trigger: AAAGGCTTTTCGACAAGCTCATCTCATAGAACTTCT...CAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp CAAGCTCATCCTGAATCACAAGGTCAGGCTCCACCAATAAACATGACTGCAGAATACAGAGAAGTTCTATaGGATGAGCTTGTCGAAAAG +
Preference number: 4 (lower is better)
Translates to: QAHPESQGQAPPINMTAEYREVL*DELVEK
Trigger: CTTTTCGACAAGCTCATCTCATAGAACTTCTCTGTA...TTCTGCAGTCATGTTTATTGGTGGAGCCTGACCTTGTGATTCAGGATGAGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp TATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAAGACTGACAGCCAGCAGTaGCATCAATGCATTTGCAGC +
Preference number: 4 (lower is better)
Translates to: YVPRTFYAFSTERKRHRKTDSQQ*HQCICS
Trigger: GCTGCAAATGCATTGATGTCACTGCTGGCTGTCAGT...CTTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GCTGAGCTAAATTTGAACCCAGGCTTATACAGCCCCAACTCTATTTCTTTCTTCATAAAAACCATCTGCTaGACCGTGGTGTTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: AELNLNPGLYSPNSISFFIKTIC*TVVFSS
Trigger: ACTGGAGAACACCACGGTTCAGCAGATGGTTTTTAT...GAAGAAAGAAATAGAGTTGGGGCTGTATAAGCCTGGGTTCAAATTTAGCTCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000578780.2
ENST00000639487.1
ENST00000640769.2
CDS-3UTR TCA 90 bp AGACAGGCAGCAAGCACAGTAATGACTTTTTCATTAGCCAGGATCTTGGGTTTAATAAAAACCATCTGCTaGACCGTGGTGTTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: RQAASTVMTFSLARILGLIKTIC*TVVFSS
Trigger: ACTGGAGAACACCACGGTTCAGCAGATGGTTTTTAT...TAAACCCAAGATCCTGGCTAATGAAAAAGTCATTACTGTGCTTGCTGCCTGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp CACTTACTTCTACATAGCCCTTTTCCAGTGTGGATGCTCTGGATAACAGAAAGTTGGGGAAGACTGAGCTaGTGGAATTGTAGTTCCAAT +
Preference number: 4 (lower is better)
Translates to: HLLLHSPFPVWMLWITESWGRLS*WNCSSN
Trigger: ATTGGAACTACAATTCCAGCAGCTCAGTCTTCCCCA...ACTTTCTGTTATCCAGAGCATCCACACTGGAAAAGGGCTATGTAGAAGTAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640769.2
CDS-3UTR GCA 90 bp TTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAAAAGGCCATTCTGTGGTaGACAAGCATCACCTCTGGC +
Preference number: 4 (lower is better)
Translates to: LCSQNFLCLFNRKEKAQKKAILW*TSITSG
Trigger: GCCAGAGGTGATGCTTGTGCACCACAGAATGGCCTT...TTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR GCA 90 bp AGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTACAGGAAGTTACAGGTaGATTCAATTGAATAAACGG +
Preference number: 4 (lower is better)
Translates to: RRGSTLCREVARLQVTAATGSYR*IQLNKR
Trigger: CCGTTTATTCAATTGAATGCACCTGTAACTTCCTGT...AGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR GCA 90 bp CTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAAACATTCTACAACCTTaGCATCTTGACTCACACATT +
Preference number: 4 (lower is better)
Translates to: LHTAGFNFSSPVDDCQLQNILQP*HLDSHI
Trigger: AATGTGTGAGTCAAGATGGCAAGGTTGTAGAATGTT...TTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000640769.2
ENST00000677824.1
CDS-3UTR GCA 90 bp ACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAAACATTCTACAACCTTaGCATCTTGACTCACACATT +
Preference number: 4 (lower is better)
Translates to: TAGFNFSSPVDDCQLQGVNILQP*HLDSHI
Trigger: AATGTGTGAGTCAAGATGGCAAGGTTGTAGAATGTT...TACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000640769.2
ENST00000677824.1
CDS-3UTR GCA 90 bp TATCACTCCCATGATACCATGACAGGTTCCAAGCTATTCTCAGCATATCTGACAAAAAGAGAAGACTGTTaGGAGAGCGAAACACGCATG +
Preference number: 4 (lower is better)
Translates to: YHSHDTMTGSKLFSAYLTKREDC*ESETRM
Trigger: CATGCGTGTTTCGCTCTCGCAACAGTCTTCTCTTTT...TGTCAGATATGCTGAGAATAGCTTGGAACCTGTCATGGTATCATGGGAGTGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR GCA 90 bp AAATCAGTAACTCTGGAGAGAACTCTGGCGTCTATTAGAGGACGCTTTGTATCAAAAAGAGAAGACTGTTaGGAGAGCGAAACACGCATG +
Preference number: 4 (lower is better)
Translates to: KSVTLERTLASIRGRFVSKREDC*ESETRM
Trigger: CATGCGTGTTTCGCTCTCGCAACAGTCTTCTCTTTT...TGATACAAAGCGTCCTCTAATAGACGCCAGAGTTCTCTCCAGAGTTACTGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR GCA 90 bp TCTTCTCGTGCCTGTGACTCTGTCAGAACCAAGAGGTCTAACAGTGGGTTTGCAGTTTCAGAGTTCATTTaGTTCAACAGATTATCACTC +
Preference number: 4 (lower is better)
Translates to: SSRACDSVRTKRSNSGFAVSEFI*FNRLSL
Trigger: GAGTGATAATCTGTTGAAGCAAATGAACTCTGAAAC...TGCAAACCCACTGTTAGACCTCTTGGTTCTGACAGAGTCACAGGCACGAGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR GCA 90 bp GCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCAGTTTCAGAGTTCATTTaGTTCAACAGATTATCACTC +
Preference number: 4 (lower is better)
Translates to: AGFNFSSPVDDCQLQGVAVSEFI*FNRLSL
Trigger: GAGTGATAATCTGTTGAAGCAAATGAACTCTGAAAC...TGCTACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000679113.1
CDS-3UTR GCA 90 bp AGACAGGCAGCAAGCACAGTAATGACTTTTTCATTAGCCAGGATCTTGGGTTTATTGTCGAAAAGCCTTTaGAGTGTCTCTGGGAGCAAT +
Preference number: 4 (lower is better)
Translates to: RQAASTVMTFSLARILGLLSKSL*SVSGSN
Trigger: ATTGCTCCCAGAGACACTGCAAAGGCTTTTCGACAA...TAAACCCAAGATCCTGGCTAATGAAAAAGTCATTACTGTGCTTGCTGCCTGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp CTTTCCAGACAGGCAGCAAGCACAGTAATGACTTTTTCATTAGCCAGGATCTTGTATGAGGGTAGCATCTaGAATGCTACAGAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: LSRQAASTVMTFSLARILYEGSI*NATEKF
Trigger: GAACTTCTCTGTAGCATTGCAGATGCTACCCTCATA...CAAGATCCTGGCTAATGAAAAAGTCATTACTGTGCTTGCTGCCTGTCTGGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TGCCTTCTGATAATTGTAAATCAGAGCCCAAAGGGCAGCTGCTCCAATCCTCTGAGCTGCAGAGAAATTTaGATCAATGAATCATCCATC +
Preference number: 4 (lower is better)
Translates to: CLLIIVNQSPKGSCSNPLSCREI*INESSI
Trigger: GATGGATGATTCATTGATGCAAATTTCTCTGCAGCT...CAGAGGATTGGAGCAGCTGCCCTTTGGGCTCTGATTTACAATTATCAGAAGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCACCATTTGGAAAATTTaGAGTATAGACACAAAGGAG +
Preference number: 4 (lower is better)
Translates to: CYTQLASTLAPLLMTVSFTIWKI*SIDTKE
Trigger: CTCCTTTGTGTCTATACTGCAAATTTTCCAAATGGT...GAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
CDS-3UTR GCA 90 bp TGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAAACCATTTGGAAAATTTaGAGTATAGACACAAAGGAG +
Preference number: 4 (lower is better)
Translates to: CREVARLQVTAATHSWLQTIWKI*SIDTKE
Trigger: CTCCTTTGTGTCTATACTGCAAATTTTCCAAATGGT...TTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
CDS-3UTR GCA 90 bp GAAGAATGTTCACCACAGTTCCCCAGAGCCCACCGGAAATGTTCTGACAACTGTACCATTTGGAAAATTTaGAGTATAGACACAAAGGAG +
Preference number: 4 (lower is better)
Translates to: EECSPQFPRAHRKCSDNCTIWKI*SIDTKE
Trigger: CTCCTTTGTGTCTATACTGCAAATTTTCCAAATGGT...ACAGTTGTCAGAACATTTCCGGTGGGCTCTGGGGAACTGTGGTGAACATTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR GCA 90 bp CCATCAAAATCCAAGGCCAGAGAGAGTGCAAGACAGGGACAAGGTGAGCTTCAAACCATTTGGAAAATTTaGAGTATAGACACAAAGGAG +
Preference number: 4 (lower is better)
Translates to: PSKSKARESARQGQGELQTIWKI*SIDTKE
Trigger: CTCCTTTGTGTCTATACTGCAAATTTTCCAAATGGT...TTGAAGCTCACCTTGTCCCTGTCTTGCACTCTCTCTGGCCTTGGATTTTGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
CDS-3UTR GCA 90 bp GCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCATCTTGTGCTTGTATTTaGTCATCTCTGTTAGTAAGT +
Preference number: 4 (lower is better)
Translates to: AGFNFSSPVDDCQLQGVASCACI*SSLLVS
Trigger: ACTTACTAACAGAGATGAGCAAATACAAGCACAAGA...TGCTACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGTCTTGTGCTTGTATTTaGTCATCTCTGTTAGTAAGT +
Preference number: 4 (lower is better)
Translates to: SSGNSCYTQLASTLAPLLSCACI*SSLLVS
Trigger: ACTTACTAACAGAGATGAGCAAATACAAGCACAAGA...CAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp AGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGATCTTGGGTTTATTTaGAGGACTGAAGCAAACATT +
Preference number: 4 (lower is better)
Translates to: RGSTSSGNSCYTQLASTLDLGFI*RTEANI
Trigger: AATGTTTGCTTCAGTCCTGCAAATAAACCCAAGATC...TAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TGCCTTCTGATAATTGTAAATCAGAGCCCAAAGGGCAGCTGCTCCAATCCTCTGGATCTTGGGTTTATTTaGAGGACTGAAGCAAACATT +
Preference number: 4 (lower is better)
Translates to: CLLIIVNQSPKGSCSNPLDLGFI*RTEANI
Trigger: AATGTTTGCTTCAGTCCTGCAAATAAACCCAAGATC...CAGAGGATTGGAGCAGCTGCCCTTTGGGCTCTGATTTACAATTATCAGAAGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp AAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGAGATCTTGGGTTTATTTaGAGGACTGAAGCAAACATT +
Preference number: 4 (lower is better)
Translates to: KAQKVVSCYYFWRAATTGDLGFI*RTEANI
Trigger: AATGTTTGCTTCAGTCCTGCAAATAAACCCAAGATC...TCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp GGTGAAGATTTCATATACCTTTTCAACAGTCTCCAACTTAATAACCAGCTCTCTAGCCCAAAGGGCAGCTaGTCCAATCCTCTGAGCATT +
Preference number: 4 (lower is better)
Translates to: GEDFIYLFNSLQLNNQLSSPKGS*SNPLSI
Trigger: AATGCTCAGAGGATTGGAGCAGCTGCCCTTTGGGCT...AGAGAGCTGGTTATTAAGTTGGAGACTGTTGAAAAGGTATATGAAATCTTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581161.5
CDS-3UTR GCA 90 bp AGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTTCCCAGAACTTTCTATaGCTTTTCAACAGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: RRGSTLCREVARLQVTAASQNFL*LFNRKE
Trigger: TTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGA...AGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAAGTTGAAGAGATTCTCGTaGCTCAGCCACTGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: YVPRTFYAFSTERKRHRKLKRFS*LSHWSS
Trigger: GCTACTCCAGTGGCTGAGGCACGAGAATCTCTTCAA...CTTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578780.2
ENST00000639487.1
ENST00000640769.2
CDS-3UTR CCA 90 bp AGCAATCAGTTCTTTCTGAAGTTGTTGCCTGACAGCAGTCCGGATATCATCTGTCAAATGTTGGACTGCTaGGGGATACTTAACCAATCT +
Preference number: 4 (lower is better)
Translates to: SNQFFLKLLPDSSPDIICQMLDC*GILNQS
Trigger: AGATTGGTTAAGTATCCCCCAGCAGTCCAACATTTG...ACAGATGATATCCGGACTGCTGTCAGGCAACAACTTCAGAAAGAACTGATTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR CCA 90 bp TTAATAACCAGCTCTCTTCTGTCATCCAGTCTGAGTTCAATAGGTTTCTTCCCATTCAGCCTGCAGATTTaGCTCCACATTAGACCGAAG +
Preference number: 4 (lower is better)
Translates to: LITSSLLSSSLSSIGFFPFSLQI*LHIRPK
Trigger: CTTCGGTCTAATGTGGAGCCAAATCTGCAGGCTGAA...TGGGAAGAAACCTATTGAACTCAGACTGGATGACAGAAGAGAGCTGGTTATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR CCA 90 bp AAATGTTCTGACAACTGTTTGCTAAGGCCACACAGCCCGTTTCAAGGGTGGTCAACAATTCAGTTTGATTaGTTTGGTATGAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: KCSDNCLLRPHSPFQGWSTIQFD*FGMRQK
Trigger: CTTCTGCCTCATACCAAACCAATCAAACTGAATTGT...TGACCACCCTTGAAACGGGCTGTGTGGCCTTAGCAAACAGTTGTCAGAACATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR CCA 90 bp CTTTCTTCTTTATTACACAGCCTTGCAGAAGACAACGGTGAAGATTATACATGTCATGTCTGTCTGTGGTaGTCAGGGGTAGCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: LSSLLHSLAEDNGEDYTCHVCLW*SGVAKE
Trigger: TTCCTTGGCTACCCCTGACCACCACAGACAGACATG...ACATGTATAATCTTCACCGTTGTCTTCTGCAAGGCTGTGTAATAAAGAAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640769.2
CDS-3UTR CCA 90 bp CAAGCCTCAGAATCATTTGTTGCCCATCTTCTCCAGATGATATATTCAGGAGTAATAACAGAATGGCCTTaGCAGCAGTGTTCACCTCAC +
Preference number: 4 (lower is better)
Translates to: QASESFVAHLLQMIYSGVITEWP*QQCSPH
Trigger: GTGAGGTGAACACTGCTGCCAAGGCCATTCTGTTAT...TACTCCTGAATATATCATCTGGAGAAGATGGGCAACAAATGATTCTGAGGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CCA 90 bp TTTTTCACTAGCAAAAGTCGCAGCATGGACTTTAATCGGGTAGTACACGGAAGCCAAGAGTGTGAGGCATaGTTGTACCAAACATTCTAC +
Preference number: 4 (lower is better)
Translates to: FFTSKSRSMDFNRVVHGSQECEA*LYQTFY
Trigger: GTAGAATGTTTGGTACAACCATGCCTCACACTCTTG...GCTTCCGTGTACTACCCGATTAAAGTCCATGCTGCGACTTTTGCTAGTGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR CCA 90 bp TGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAAAATTTCTGTAGGCATTaGAATTACAAGGAGATTCTG +
Preference number: 4 (lower is better)
Translates to: CREVARLQVTAATHSWLQNFCRH*NYKEIL
Trigger: CAGAATCTCCTTGTAATTCCAATGCCTACAGAAATT...TTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp TGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAATTTCTGTAGGCATTaGAATTACAAGGAGATTCTG +
Preference number: 4 (lower is better)
Translates to: CYTQLASTLAPLLMTVSFNFCRH*NYKEIL
Trigger: CAGAATCTCCTTGTAATTCCAATGCCTACAGAAATT...GAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp GGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCATCCAATTTCTGTAGGCATTaGAATTACAAGGAGATTCTG +
Preference number: 4 (lower is better)
Translates to: GFNFSSPVDDCQLQGVASNFCRH*NYKEIL
Trigger: CAGAATCTCCTTGTAATTCCAATGCCTACAGAAATT...GGATGCTACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp GGCTTTTCAAAGCTGTTTTTGCCTTCTGATAATTGTAAATCAGAGCCCAAAGGGGGTGGAGAGAGAACTTaGATCTCGATCCTGACTTGT +
Preference number: 4 (lower is better)
Translates to: GFSKLFLPSDNCKSEPKGGGERT*ISILTC
Trigger: ACAAGTCAGGATCGAGATCCAAGTTCTCTCTCCACC...CCCTTTGGGCTCTGATTTACAATTATCAGAAGGCAAAAACAGCTTTGAAAAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CCA 90 bp AGACAGGCAGCAAGCACAGTAATGACTTTTTCATTAGCCAGGATCTTGGGTTTAGTTTTGCTCTTAGCCTaGAGATGCCCTTTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: RQAASTVMTFSLARILGLVLLLA*RCPFAS
Trigger: AGAAGCAAAAGGGCATCTCCAGGCTAAGAGCAAAAC...TAAACCCAAGATCCTGGCTAATGAAAAAGTCATTACTGTGCTTGCTGCCTGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CCA 90 bp AAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGATTTTCAGGATATCTTTaGAGGATTTCCCTTCATAGC +
Preference number: 4 (lower is better)
Translates to: KAQKVVSCYYFWRAATTGFSGYL*RISLHS
Trigger: GCTATGAAGGGAAATCCTCCAAAGATATCCTGAAAA...TCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp GCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCAAGAACTGCAACCATTTaGAAAATTTGCAGTATAGAC +
Preference number: 4 (lower is better)
Translates to: AGFNFSSPVDDCQLQGVARTATI*KICSID
Trigger: GTCTATACTGCAAATTTTCCAAATGGTTGCAGTTCT...TGCTACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
CDS-3UTR CCA 90 bp AATGCACACTTACTTCTACATAGCCCTTTTCCAGTGTGGATGCTCTGGATAACATTCTCCAGTGGCATCTaGGAAGCCAACTTTAGGATA +
Preference number: 4 (lower is better)
Translates to: NAHLLLHSPFPVWMLWITFSSGI*EANFRI
Trigger: TATCCTAAAGTTGGCTTCCCAGATGCCACTGGAGAA...TGTTATCCAGAGCATCCACACTGGAAAAGGGCTATGTAGAAGTAAGTGTGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578780.2
ENST00000639487.1
ENST00000640769.2
CDS-3UTR CCA 90 bp AGGTTCAGTTGTGCATTTATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGACGTGGTGTTCTCCAGTaGCATCTGGGAAGCCAACTT +
Preference number: 4 (lower is better)
Translates to: RFSCAFMCFICSMQLSIRRGVLQ*HLGSQL
Trigger: AAGTTGGCTTCCCAGATGCCACTGGAGAACACCACG...TCTTATAGACAATTGCATGGAGCAGATGAAACACATAAATGCACAACTGAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR CAA 72 bp AGTATTGGGATGACAGGACAGAGAGATTCAATAAACTaGTTCCAGGTCAATGCTGTCATCATCAATCGTCCC +
Preference number: 4 (lower is better)
Translates to: SIGMTGQRDSIN*FQVNAVIINRP
Trigger: GGGACGATTGATGATGACAGCATTGACCTGGAACAAGTTTATTGAATCTCTCTGTCCTGTCATCCCAATACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
3UTR CAA 72 bp AGAAGAGGCAATAAAGGGCTGCTCTTGTGCTTGTATTaGCTCATCTCTGTTAGTAAGTCTAGACAGCCATCA +
Preference number: 4 (lower is better)
Translates to: RRGNKGLLLCLY*LISVSKSRQPS
Trigger: TGATGGCTGTCTAGACTTACTAACAGAGATGAGCAAATACAAGCACAAGAGCAGCCCTTTATTGCCTCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
3UTR CAA 72 bp ACCAACAAAGAGAACTGCAACCTCTACTCCTTGTCTTaGCTCATTCTTAGTGGTCAGTGTTCTCTCCATTTG +
Preference number: 4 (lower is better)
Translates to: TNKENCNLYSLS*LILSGQCSLHL
Trigger: CAAATGGAGAGAACACTGACCACTAAGAATGAGCAAAGACAAGGAGTAGAGGTTGCAGTTCTCTTTGTTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679113.1
3UTR CAA 72 bp AACTTGACCAACAAAGAGAACTGCAACCTCTACTCCTaGTCTTTGCTCATTCTTAGTGGTCAGTGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: NLTNKENCNLYS*SLLILSGQCSL
Trigger: GAGAGAACACTGACCACTAAGAATGAGCAAAGACAAGGAGTAGAGGTTGCAGTTCTCTTTGTTGGTCAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679113.1
CDS-3UTR TCA 90 bp CAAGCCTCAGAATCATTTGTTGCCCATCTTCTCCAGATGATATATTCAGGAGTACTAAACATTCCTTCGTaGTTTCCAGACAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: QASESFVAHLLQMIYSGVLNIPS*FPDSSG
Trigger: ACCACTGCTGTCTGGAAATCACGAAGGAATGTTTAG...TACTCCTGAATATATCATCTGGAGAAGATGGGCAACAAATGATTCTGAGGCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR TCA 90 bp TTAATAACCAGCTCTCTTCTGTCATCCAGTCTGAGTTCAATAGGTTTCTTCCCACCTGTAGTATTGGGATaGCAGGACAGAGAGATTCAA +
Preference number: 4 (lower is better)
Translates to: LITSSLLSSSLSSIGFFPPVVLG*QDREIQ
Trigger: TTGAATCTCTCTGTCCTGTCATCCCAATACTACAGG...TGGGAAGAAACCTATTGAACTCAGACTGGATGACAGAAGAGAGCTGGTTATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR TCA 90 bp AGACAGGCAGCAAGCACAGTAATGACTTTTTCATTAGCCAGGATCTTGGGTTTATGGTGTCCAATTACATaGACAGGTAGATGGTACCTT +
Preference number: 4 (lower is better)
Translates to: RQAASTVMTFSLARILGLWCPIT*TGRWYL
Trigger: AAGGTACCATCTACCTGTTCATGTAATTGGACACCA...TAAACCCAAGATCCTGGCTAATGAAAAAGTCATTACTGTGCTTGCTGCCTGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp CTTTCTTCTTTATTACACAGCCTTGCAGAAGACAACGGTGAAGATTATACATGTTTCTTCTCGTGCCTGTaGCTCTGTCAGAACCAAGAG +
Preference number: 4 (lower is better)
Translates to: LSSLLHSLAEDNGEDYTCFFSCL*LCQNQE
Trigger: CTCTTGGTTCTGACAGAGTCACAGGCACGAGAAGAA...ACATGTATAATCTTCACCGTTGTCTTCTGCAAGGCTGTGTAATAAAGAAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640769.2
CDS-3UTR TCA 90 bp AGCCTCAGAATCATTTGTTGCCCATCTTCTCCAGATGATATATTCAGGAGTAACGCAATCAGTTCTTTCTaGAGTTGTTGCCTGACAGCA +
Preference number: 4 (lower is better)
Translates to: SLRIICCPSSPDDIFRSNAISSF*SCCLTA
Trigger: TGCTGTCAGGCAACAACTTCAGAAAGAACTGATTGC...GTTACTCCTGAATATATCATCTGGAGAAGATGGGCAACAAATGATTCTGAGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp TTTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAATATCTAGAGGCTTTGTaGGAGGAGAGTGTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: FMFPELSMPFQQKGKGTEYLEAL*EESVSS
Trigger: GGAGCTCACACTCTCCTCTCACAAAGCCTCTAGATA...TTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp ACTGGATCACCACATAAAACCTTCCTCAAGAGTGTGAGGCATGGTTGTACCAAAATATGTTCTTCACTATaGCTACCCAAAGGCAAGAAC +
Preference number: 4 (lower is better)
Translates to: TGSPHKTFLKSVRHGCTKICSSL*LPKGKN
Trigger: GTTCTTGCCTTTGGGTAGTCATAGTGAAGAACATAT...TTTGGTACAACCATGCCTCACACTCTTGAGGAAGGTTTTATGTGGTGATCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR TCA 90 bp TTTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAACCACCGGAAATGTTCTaGCAACTGTTTGCTAAGGCC +
Preference number: 4 (lower is better)
Translates to: FMFPELSMPFQQKGKGTEPPEMF*QLFAKA
Trigger: GGCCTTAGCAAACAGTTGTCAGAACATTTCCGGTGG...TTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp GGCAATAAAGGGCTGCTCTTGTGCTTGTATTTGCTCATCTCTGTTAGTAAGTCTCACCATACTACATTCTaGCTGGTCCAGAAGAATGTT +
Preference number: 4 (lower is better)
Translates to: GNKGLLLCLYLLISVSKSHHTTF*LVQKNV
Trigger: AACATTCTTCTGGACCAGTCAGAATGTAGTATGGTG...AGACTTACTAACAGAGATGAGCAAATACAAGCACAAGAGCAGCCCTTTATTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp TGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGGCTTTCAAAGCATGTTTCTTCAGTACTCCCCAATaGAGGTGCCACCGTTGTTTC +
Preference number: 4 (lower is better)
Translates to: CFICSMQLSIRLAFKACFFSTPQ*RCHRCF
Trigger: GAAACAACGGTGGCACCTTCATTGGGGAGTACTGAA...GAAACATGCTTTGAAAGCCAATCTTATAGACAATTGCATGGAGCAGATGAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp TATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAAGGACTGCACAAGTGGCTaGAATTCAGTACTCCCCAAT +
Preference number: 4 (lower is better)
Translates to: YVPRTFYAFSTERKRHRKDCTSG*NSVLPN
Trigger: ATTGGGGAGTACTGAATTTCAGCCACTTGTGCAGTC...CTTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp TTGGTACATATGGTGAGAATTCCAATGATATTGGTGATAAGAGGTTTCACAAGCTTCACAAGCTCATCCTaGATCACAAGGTCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: LVHMVRIPMILVIRGFTSFTSSS*ITRSGS
Trigger: GGAGCCTGACCTTGTGATTCAGGATGAGCTTGTGAA...GCTTGTGAAACCTCTTATCACCAATATCATTGGAATTCTCACCATATGTACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp TGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGGCTTTCAAAGCATGTTTCACTGACAGCCAGCAGTaGCATCAATGCATTTGCAGC +
Preference number: 4 (lower is better)
Translates to: CFICSMQLSIRLAFKACFTDSQQ*HQCICS
Trigger: GCTGCAAATGCATTGATGTCACTGCTGGCTGTCAGT...GAAACATGCTTTGAAAGCCAATCTTATAGACAATTGCATGGAGCAGATGAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR TCA 90 bp AGTTGTGCATTTATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGGCTAAGACAGGGACAAGGTaGGCTTCAAGAGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: SCAFMCFICSMQLSIRLAKTGTR*ASRAAS
Trigger: AGAAGCAGCTCTTGAAGCTCACCTTGTCCCTGTCTT...AGCCAATCTTATAGACAATTGCATGGAGCAGATGAAACACATAAATGCACAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR TCA 90 bp AAAGTTTTCTTTGCTAAGGAGTATGCTTCATCCACTCTTCTTTTTACTGATGGGGATGTACTTTCCTGGTaGCCGTTGTTTCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: KVFFAKEYASSTLLFTDGDVLSW*PLFLRW
Trigger: CCACCTCAGAAACAACGGTCACCAGGAAAGTACATC...CCCATCAGTAAAAAGAAGAGTGGATGAAGCATACTCCTTAGCAAAGAAAACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000579986.6
CDS-3UTR GCA 90 bp ACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAATGATGAGTACCTCTTaGTTCATGACAATAAGACAA +
Preference number: 4 (lower is better)
Translates to: TAGFNFSSPVDDCQLQGVMMSTS*FMTIRQ
Trigger: TTGTCTTATTGTCATGAAGCAAGAGGTACTCATCAT...TACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR GCA 90 bp CTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAATGATGAGTACCTCTTaGTTCATGACAATAAGACAA +
Preference number: 4 (lower is better)
Translates to: LHTAGFNFSSPVDDCQLQMMSTS*FMTIRQ
Trigger: TTGTCTTATTGTCATGAAGCAAGAGGTACTCATCAT...TTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR GCA 90 bp TGGAGTAAGGACTCACAGCATGGTGTCCAATTACATGAACAGGTAGATGGTACCACAGGAAGTTACAGGTaGATTCAATTGAATAAACGG +
Preference number: 4 (lower is better)
Translates to: WSKDSQHGVQLHEQVDGTTGSYR*IQLNKR
Trigger: CCGTTTATTCAATTGAATGCACCTGTAACTTCCTGT...GGTACCATCTACCTGTTCATGTAATTGGACACCATGCTGTGAGTCCTTACTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR GCA 90 bp TTAATAACCAGCTCTCTTCTGTCATCCAGTCTGAGTTCAATAGGTTTCTTCCCAAAAAGAGAAGACTGTTaGGAGAGCGAAACACGCATG +
Preference number: 4 (lower is better)
Translates to: LITSSLLSSSLSSIGFFPKREDC*ESETRM
Trigger: CATGCGTGTTTCGCTCTCGCAACAGTCTTCTCTTTT...TGGGAAGAAACCTATTGAACTCAGACTGGATGACAGAAGAGAGCTGGTTATTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR GCA 90 bp ACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGTTTCAGAGTTCATTTaGTTCAACAGATTATCACTC +
Preference number: 4 (lower is better)
Translates to: TAGFNFSSPVDDCQLQGVVSEFI*FNRLSL
Trigger: GAGTGATAATCTGTTGAAGCAAATGAACTCTGAAAC...TACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000679113.1
CDS-3UTR GCA 90 bp GGCTTTTCAAAGCTGTTTTTGCCTTCTGATAATTGTAAATCAGAGCCCAAAGGGTTGTCGAAAAGCCTTTaGAGTGTCTCTGGGAGCAAT +
Preference number: 4 (lower is better)
Translates to: GFSKLFLPSDNCKSEPKGLSKSL*SVSGSN
Trigger: ATTGCTCCCAGAGACACTGCAAAGGCTTTTCGACAA...CCCTTTGGGCTCTGATTTACAATTATCAGAAGGCAAAAACAGCTTTGAAAAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp CACTTACTTCTACATAGCCCTTTTCCAGTGTGGATGCTCTGGATAACAGAAAGTACCAATAAACATGACTaGAGAAGCCTGGACAAAGAG +
Preference number: 4 (lower is better)
Translates to: HLLLHSPFPVWMLWITESTNKHD*RSLDKE
Trigger: CTCTTTGTCCAGGCTTCTGCAGTCATGTTTATTGGT...ACTTTCTGTTATCCAGAGCATCCACACTGGAAAAGGGCTATGTAGAAGTAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000639487.1
ENST00000640769.2
CDS-3UTR GCA 90 bp TATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAAGACAAGCCTGCACATGTaGAGAACATATCAATCGCCG +
Preference number: 4 (lower is better)
Translates to: YVPRTFYAFSTERKRHRKTSLHM*RTYQSP
Trigger: CGGCGATTGATATGTTCTGCACATGTGCAGGCTTGT...CTTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp GTAAGAAGTTACTCTTCTGAATTACTCCTTTACAGTCATGCGACAAGGCCAGGTCAGTTTCTTAGGAGCTaGATGGCAATGCTTAACTCT +
Preference number: 4 (lower is better)
Translates to: VRSYSSELLLYSHATRPGQFLRS*MAMLNS
Trigger: AGAGTTAAGCATTGCCATGCAGCTCCTAAGAAACTG...ACCTGGCCTTGTCGCATGACTGTAAAGGAGTAATTCAGAAGAGTAACTTCTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000639487.1
CDS-3UTR GCA 90 bp TATGAGGGTAGCATCTGCAATGCTACAGAGAAGTTCTATGAGATGAGCTTGTCGGTGAGCTTCAAGAGCTaGTTCTTTACATTCCTCATT +
Preference number: 4 (lower is better)
Translates to: YEGSICNATEKFYEMSLSVSFKS*FFTFLI
Trigger: AATGAGGAATGTAAAGAAGCAGCTCTTGAAGCTCAC...CGACAAGCTCATCTCATAGAACTTCTCTGTAGCATTGCAGATGCTACCCTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR GCA 90 bp AAAAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGAGCTGCAGAGAAATTTaGATCAATGAATCATCCATC +
Preference number: 4 (lower is better)
Translates to: KRHRKLSAAITSGELPQLSCREI*INESSI
Trigger: GATGGATGATTCATTGATGCAAATTTCTCTGCAGCT...CAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp GTACATATGGTGAGAATTCCAATGATATTGGTGATAAGAGGTTTCACAAGCTCAACAGCATCAGAGAGTTaGTCACGGCTCCTCTATGTG +
Preference number: 4 (lower is better)
Translates to: VHMVRIPMILVIRGFTSSTASES*SRLLYV
Trigger: CACATAGAGGAGCCGTGAGCAACTCTCTGATGCTGT...TGAGCTTGTGAAACCTCTTATCACCAATATCATTGGAATTCTCACCATATGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR GCA 90 bp AAAGTTTTCTTTGCTAAGGAGTATGCTTCATCCACTCTTCTTTTTACTGATGGGACAGCATCAGAGAGTTaGTCACGGCTCCTCTATGTG +
Preference number: 4 (lower is better)
Translates to: KVFFAKEYASSTLLFTDGTASES*SRLLYV
Trigger: CACATAGAGGAGCCGTGAGCAACTCTCTGATGCTGT...CCCATCAGTAAAAAGAAGAGTGGATGAAGCATACTCCTTAGCAAAGAAAACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp CTTTCTTCTTTATTACACAGCCTTGCAGAAGACAACGGTGAAGATTATACATGTACAGCATCAGAGAGTTaGTCACGGCTCCTCTATGTG +
Preference number: 4 (lower is better)
Translates to: LSSLLHSLAEDNGEDYTCTASES*SRLLYV
Trigger: CACATAGAGGAGCCGTGAGCAACTCTCTGATGCTGT...ACATGTATAATCTTCACCGTTGTCTTCTGCAAGGCTGTGTAATAAAGAAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578780.2
ENST00000639487.1
ENST00000640769.2
CDS-3UTR GCA 90 bp TTTTCTTTGCTAAGGAGTATGCTTCATCCACTCTTCTTTTTACTGATGGGCTTTACAGCATCAGAGAGTTaGTCACGGCTCCTCTATGTG +
Preference number: 4 (lower is better)
Translates to: FSLLRSMLHPLFFLLMGFTASES*SRLLYV
Trigger: CACATAGAGGAGCCGTGAGCAACTCTCTGATGCTGT...AAAGCCCATCAGTAAAAAGAAGAGTGGATGAAGCATACTCCTTAGCAAAGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp AAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGATCTTGTGCTTGTATTTaGTCATCTCTGTTAGTAAGT +
Preference number: 4 (lower is better)
Translates to: KAQKVVSCYYFWRAATTGSCACI*SSLLVS
Trigger: ACTTACTAACAGAGATGAGCAAATACAAGCACAAGA...TCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp AAAAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGATCTTGGGTTTATTTaGAGGACTGAAGCAAACATT +
Preference number: 4 (lower is better)
Translates to: KRHRKLSAAITSGELPQLDLGFI*RTEANI
Trigger: AATGTTTGCTTCAGTCCTGCAAATAAACCCAAGATC...CAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TGTGCTCTTCTACTGACAGCCAGCAGTGACATCAATGCATTTGCAGCTACTCTTGATCTTGGGTTTATTTaGAGGACTGAAGCAAACATT +
Preference number: 4 (lower is better)
Translates to: CALLLTASSDINAFAATLDLGFI*RTEANI
Trigger: AATGTTTGCTTCAGTCCTGCAAATAAACCCAAGATC...AAGAGTAGCTGCAAATGCATTGATGTCACTGCTGGCTGTCAGTAGAAGAGCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp AGACAGGCAGCAAGCACAGTAATGACTTTTTCATTAGCCAGGATCTTGGGTTTACAGAAAGTTGTCAGCTaGTATTACTTCTGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: RQAASTVMTFSLARILGLQKVVS*YYFWRA
Trigger: AGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTG...TAAACCCAAGATCCTGGCTAATGAAAAAGTCATTACTGTGCTTGCTGCCTGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TGGGAAAGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACATCCCAGAACTTTCTATaGCTTTTCAACAGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: WERRGSTLCREVARLQVTSQNFL*LFNRKE
Trigger: TTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGA...TGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCTTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp AGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTAACATTCTACAACCTTaGATAATCACAGCTAACTGT +
Preference number: 4 (lower is better)
Translates to: RRGSTLCREVARLQVTAANILQP*IITANC
Trigger: ACAGTTAGCTGTGATTATGCAAGGTTGTAGAATGTT...AGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CCA 90 bp GACTTCAAGGTAACCCCACATGGACCAGGGCAACCCTTTAAAGACAATCTGTCAGACAAAGAAGAATTTTaGGAAACTGTGTCGTGTTTA +
Preference number: 4 (lower is better)
Translates to: DFKVTPHGPGQPFKDNLSDKEEF*ETVSCL
Trigger: TAAACACGACACAGTTTCCCAAAATTCTTCTTTGTC...TGACAGATTGTCTTTAAAGGGTTGCCCTGGTCCATGTGGGGTTACCTTGAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CCA 90 bp TTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAAATGGAGACACAAAACTaGGGAAGACTGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LCSQNFLCLFNRKEKAQKMETQN*GRLSCW
Trigger: CCAGCAGCTCAGTCTTCCCCAGTTTTGTGTCTCCAT...TTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CCA 90 bp AACAAAGAGAACTGCAACCATTTGGAAAATTTGCAGTATAGACACAAAGGAGCTATGGAGACACAAAACTaGGGAAGACTGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: NKENCNHLENLQYRHKGAMETQN*GRLSCW
Trigger: CCAGCAGCTCAGTCTTCCCCAGTTTTGTGTCTCCAT...AGCTCCTTTGTGTCTATACTGCAAATTTTCCAAATGGTTGCAGTTCTCTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CCA 90 bp GTACATATGGTGAGAATTCCAATGATATTGGTGATAAGAGGTTTCACAAGCTCAAAGCTACGCAAGGCTTaGTCTGCCAGCTCCACTAAT +
Preference number: 4 (lower is better)
Translates to: VHMVRIPMILVIRGFTSSKLRKA*SASSTN
Trigger: ATTAGTGGAGCTGGCAGACCAAGCCTTGCGTAGCTT...TGAGCTTGTGAAACCTCTTATCACCAATATCATTGGAATTCTCACCATATGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CCA 90 bp CCATCAAGCCTCAGAATCATTTGTTGCCCATCTTCTCCAGATGATATATTCAGGCAAGAGTGTGAGGCATaGTTGTACCAAACATTCTAC +
Preference number: 4 (lower is better)
Translates to: PSSLRIICCPSSPDDIFRQECEA*LYQTFY
Trigger: GTAGAATGTTTGGTACAACCATGCCTCACACTCTTG...CCTGAATATATCATCTGGAGAAGATGGGCAACAAATGATTCTGAGGCTTGATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CCA 90 bp AACAAAGAGAACTGCAACCATTTGGAAAATTTGCAGTATAGACACAAAGGAGCTAGCCCGTTTCAAGGGTaGTCAGTGCTGATCCTAATC +
Preference number: 4 (lower is better)
Translates to: NKENCNHLENLQYRHKGASPFQG*SVLILI
Trigger: GATTAGGATCAGCACTGACCACCCTTGAAACGGGCT...AGCTCCTTTGTGTCTATACTGCAAATTTTCCAAATGGTTGCAGTTCTCTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CCA 90 bp TTTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAAGCCCGTTTCAAGGGTaGTCAGTGCTGATCCTAATC +
Preference number: 4 (lower is better)
Translates to: FMFPELSMPFQQKGKGTESPFQG*SVLILI
Trigger: GATTAGGATCAGCACTGACCACCCTTGAAACGGGCT...TTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp CAAGGTCAGGCTCCACCAATAAACATGACTGCAGAAGCCTGGACAAAGAGGATAAATTTCTGTAGGCATTaGAATTACAAGGAGATTCTG +
Preference number: 4 (lower is better)
Translates to: QGQAPPINMTAEAWTKRINFCRH*NYKEIL
Trigger: CAGAATCTCCTTGTAATTCCAATGCCTACAGAAATT...TATCCTCTTTGTCCAGGCTTCTGCAGTCATGTTTATTGGTGGAGCCTGACCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CCA 90 bp ACTCTGGCGTCTATTAGAGGACGCTTTGTATCAGCCCCTTCTTCACTGGTAAGAAATTTCTGTAGGCATTaGAATTACAAGGAGATTCTG +
Preference number: 4 (lower is better)
Translates to: TLASIRGRFVSAPSSLVRNFCRH*NYKEIL
Trigger: CAGAATCTCCTTGTAATTCCAATGCCTACAGAAATT...TCTTACCAGTGAAGAAGGGGCTGATACAAAGCGTCCTCTAATAGACGCCAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR CCA 90 bp TATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAAGCCGTTGTTTCTGAGGTaGAGAGAGAACTTGGATCTC +
Preference number: 4 (lower is better)
Translates to: YVPRTFYAFSTERKRHRKPLFLR*RENLDL
Trigger: GAGATCCAAGTTCTCTCTCCACCTCAGAAACAACGG...CTTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp TTTTCTTTGCTAAGGAGTATGCTTCATCCACTCTTCTTTTTACTGATGGGCTTTCCTTTGCAGTGTCTCTaGGAGCAATCGTCAAGAGGT +
Preference number: 4 (lower is better)
Translates to: FSLLRSMLHPLFFLLMGFPLQCL*EQSSRG
Trigger: ACCTCTTGACGATTGCTCCCAGAGACACTGCAAAGG...AAAGCCCATCAGTAAAAAGAAGAGTGGATGAAGCATACTCCTTAGCAAAGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CCA 90 bp ACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAAGAACTGCAACCATTTaGAAAATTTGCAGTATAGAC +
Preference number: 4 (lower is better)
Translates to: TAGFNFSSPVDDCQLQGVRTATI*KICSID
Trigger: GTCTATACTGCAAATTTTCCAAATGGTTGCAGTTCT...TACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
CDS-3UTR CCA 90 bp AGCCTCAGAATCATTTGTTGCCCATCTTCTCCAGATGATATATTCAGGAGTAACAGGTGTAGCATCCCATaGCACTCAGGAAGAATTAAG +
Preference number: 4 (lower is better)
Translates to: SLRIICCPSSPDDIFRSNRCSIP*HSGRIK
Trigger: CTTAATTCTTCCTGAGTGCCATGGGATGCTACACCT...GTTACTCCTGAATATATCATCTGGAGAAGATGGGCAACAAATGATTCTGAGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CCA 90 bp CCCTTTACAAATAATGCACACTTACTTCTACATAGCCCTTTTCCAGTGTGGATGCAGTTCTCTCTCTCATaGGAAAGAAGGGGATCAACA +
Preference number: 4 (lower is better)
Translates to: PFTNNAHLLLHSPFPVWMQFSLS*ERRGST
Trigger: TGTTGATCCCCTTCTTTCCCATGAGAGAGAGAACTG...CATCCACACTGGAAAAGGGCTATGTAGAAGTAAGTGTGCATTATTTGTAAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578780.2
ENST00000639487.1
ENST00000640769.2
CDS-3UTR CCA 90 bp GGCTTTTCAAAGCTGTTTTTGCCTTCTGATAATTGTAAATCAGAGCCCAAAGGGAGCCCTTTTCCAGTGTaGATGCTCTGGATAACAGAA +
Preference number: 4 (lower is better)
Translates to: GFSKLFLPSDNCKSEPKGSPFPV*MLWITE
Trigger: TTCTGTTATCCAGAGCATCCACACTGGAAAAGGGCT...CCCTTTGGGCTCTGATTTACAATTATCAGAAGGCAAAAACAGCTTTGAAAAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000639487.1
CDS-3UTR TCA 90 bp ACTTTCCAGACAGGCAGCAAGCACAGTAATGACTTTTTCATTAGCCAGGATCTTAAACCTGGATCTCGGTaGAAGTTAAGTCTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: TFQTGSKHSNDFFISQDLKPGSR*KLSLFL
Trigger: AAGAAACAGACTTAACTTTCACCGAGATCCAGGTTT...AAGATCCTGGCTAATGAAAAAGTCATTACTGTGCTTGCTGCCTGTCTGGAAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR TCA 90 bp TTTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAATATTCTCAGCATATCTaGCACCGGCTTCAAGGCCAA +
Preference number: 4 (lower is better)
Translates to: FMFPELSMPFQQKGKGTEYSQHI*HRLQGQ
Trigger: TTGGCCTTGAAGCCGGTGTCAGATATGCTGAGAATA...TTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
ENST00000679113.1
CDS-3UTR TCA 90 bp TTCAGTTGTGCATTTATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGTTCTTCTCGTGCCTGTaGCTCTGTCAGAACCAAGAG +
Preference number: 4 (lower is better)
Translates to: FSCAFMCFICSMQLSIRLFFSCL*LCQNQE
Trigger: CTCTTGGTTCTGACAGAGTCACAGGCACGAGAAGAA...CAATCTTATAGACAATTGCATGGAGCAGATGAAACACATAAATGCACAACTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp ATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGGCTTTCAAAGCATGTTCTGAAGTTGTTGCCTaGCAGCAGTCCGGATATCAT +
Preference number: 4 (lower is better)
Translates to: MCFICSMQLSIRLAFKACSEVVA*QQSGYH
Trigger: ATGATATCCGGACTGCTGTCAGGCAACAACTTCAGA...ACATGCTTTGAAAGCCAATCTTATAGACAATTGCATGGAGCAGATGAAACACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp TGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGGCTTTCAAAGCATGTTTCTCTGAAGTTGTTGCCTaGCAGCAGTCCGGATATCAT +
Preference number: 4 (lower is better)
Translates to: CFICSMQLSIRLAFKACFSEVVA*QQSGYH
Trigger: ATGATATCCGGACTGCTGTCAGGCAACAACTTCAGA...GAAACATGCTTTGAAAGCCAATCTTATAGACAATTGCATGGAGCAGATGAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp TTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAAGACCTCAAGGAGACCTaGCAAGTACTTCACACAGAT +
Preference number: 4 (lower is better)
Translates to: LCSQNFLCLFNRKEKAQKDLKET*QVLHTD
Trigger: ATCTGTGTGAAGTACTTGTCAGGTCTCCTTGAGGTC...TTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp AGTTGTGCATTTATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGGCTGACCTCAAGGAGACCTaGCAAGTACTTCACACAGAT +
Preference number: 4 (lower is better)
Translates to: SCAFMCFICSMQLSIRLADLKET*QVLHTD
Trigger: ATCTGTGTGAAGTACTTGTCAGGTCTCCTTGAGGTC...AGCCAATCTTATAGACAATTGCATGGAGCAGATGAAACACATAAATGCACAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp TGCTTGTATTTGCTCATCTCTGTTAGTAAGTCTAGACAGCCATCAAGCCTCAGAATCTCATGGGATAAGTaGAGCAAGCAAAGAATTGTG +
Preference number: 4 (lower is better)
Translates to: CLYLLISVSKSRQPSSLRISWDK*SKQRIV
Trigger: CACAATTCTTTGCTTGCTTCACTTATCCCATGAGAT...TCTGAGGCTTGATGGCTGTCTAGACTTACTAACAGAGATGAGCAAATACAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp TTTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAGAAAGAGATGAATCATaGGGTGGCCGTGGTGATGTA +
Preference number: 4 (lower is better)
Translates to: FMFPELSMPFQQKGKGTEERDES*GGRGDV
Trigger: TACATCACCACGGCCACCTCATGATTCATCTCTTTC...TTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp AGGTTCAGTTGTGCATTTATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGAGAGGCTGCACATTGCTaGAAGAAGAGATGGAGTAAC +
Preference number: 4 (lower is better)
Translates to: RFSCAFMCFICSMQLSIREAAHC*KKRWSN
Trigger: GTTACTCCATCTCTTCTTTCAGCAATGTGCAGCCTC...TCTTATAGACAATTGCATGGAGCAGATGAAACACATAAATGCACAACTGAACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp AAAGTTTTCTTTGCTAAGGAGTATGCTTCATCCACTCTTCTTTTTACTGATGGGGAGGCTGCACATTGCTaGAAGAAGAGATGGAGTAAC +
Preference number: 4 (lower is better)
Translates to: KVFFAKEYASSTLLFTDGEAAHC*KKRWSN
Trigger: GTTACTCCATCTCTTCTTTCAGCAATGTGCAGCCTC...CCCATCAGTAAAAAGAAGAGTGGATGAAGCATACTCCTTAGCAAAGAAAACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp AGACAGGCAGCAAGCACAGTAATGACTTTTTCATTAGCCAGGATCTTGGGTTTAAGAAGTTCTATGAGATaGGCTTGTCGAAAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: RQAASTVMTFSLARILGLRSSMR*ACRKAF
Trigger: AAAGGCTTTTCGACAAGCTCATCTCATAGAACTTCT...TAAACCCAAGATCCTGGCTAATGAAAAAGTCATTACTGTGCTTGCTGCCTGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR TCA 90 bp TATCACTCCCATGATACCATGACAGGTTCCAAGCTATTCTCAGCATATCTGACATACAGAGAAGTTCTATaGGATGAGCTTGTCGAAAAG +
Preference number: 4 (lower is better)
Translates to: YHSHDTMTGSKLFSAYLTYREVL*DELVEK
Trigger: CTTTTCGACAAGCTCATCTCATAGAACTTCTCTGTA...TGTCAGATATGCTGAGAATAGCTTGGAACCTGTCATGGTATCATGGGAGTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR TCA 90 bp TGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGGCTTTCAAAGCATGTTTCCCTCTATGTGTAGCTTaGACAGGGTGTTGTCCACAA +
Preference number: 4 (lower is better)
Translates to: CFICSMQLSIRLAFKACFPLCVA*TGCCPQ
Trigger: TTGTGGACAACACCCTGTTCAAGCTACACATAGAGG...GAAACATGCTTTGAAAGCCAATCTTATAGACAATTGCATGGAGCAGATGAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR TCA 90 bp TTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAACCTCTATGTGTAGCTTaGACAGGGTGTTGTCCACAA +
Preference number: 4 (lower is better)
Translates to: LCSQNFLCLFNRKEKAQKPLCVA*TGCCPQ
Trigger: TTGTGGACAACACCCTGTTCAAGCTACACATAGAGG...TTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp TATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAAGCATGATGTTTTGGGCTaGGCTAAATTTGAACCCAGG +
Preference number: 4 (lower is better)
Translates to: YVPRTFYAFSTERKRHRKHDVLG*AKFEPR
Trigger: CCTGGGTTCAAATTTAGCTCAGCCCAAAACATCATG...CTTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000578780.2
ENST00000639487.1
ENST00000640769.2
CDS-3UTR GCA 90 bp TTTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAACAAGCCTGCACATGTaGAGAACATATCAATCGCCG +
Preference number: 4 (lower is better)
Translates to: FMFPELSMPFQQKGKGTETSLHM*RTYQSP
Trigger: CGGCGATTGATATGTTCTGCACATGTGCAGGCTTGT...TTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAAACAAGCCTGCACATGTaGAGAACATATCAATCGCCG +
Preference number: 4 (lower is better)
Translates to: LCSQNFLCLFNRKEKAQKTSLHM*RTYQSP
Trigger: CGGCGATTGATATGTTCTGCACATGTGCAGGCTTGT...TTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp CAAGCCTCAGAATCATTTGTTGCCCATCTTCTCCAGATGATATATTCAGGAGTACAGTTTCTTAGGAGCTaGATGGCAATGCTTAACTCT +
Preference number: 4 (lower is better)
Translates to: QASESFVAHLLQMIYSGVQFLRS*MAMLNS
Trigger: AGAGTTAAGCATTGCCATGCAGCTCCTAAGAAACTG...TACTCCTGAATATATCATCTGGAGAAGATGGGCAACAAATGATTCTGAGGCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TCTTGTGCTTGTATTTGCTCATCTCTGTTAGTAAGTCTAGACAGCCATCAAGCCGTGAGCTTCAAGAGCTaGTTCTTTACATTCCTCATT +
Preference number: 4 (lower is better)
Translates to: SCACICSSLLVSLDSHQAVSFKS*FFTFLI
Trigger: AATGAGGAATGTAAAGAAGCAGCTCTTGAAGCTCAC...GGCTTGATGGCTGTCTAGACTTACTAACAGAGATGAGCAAATACAAGCACAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAATCTTCAGGTAACAGCTaGTACACACAGCTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: LCSQNFLCLFNRKEKAQKSSGNS*YTQLAS
Trigger: TGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGA...TTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp AAGCTGTTTTTGCCTTCTGATAATTGTAAATCAGAGCCCAAAGGGCAGCTGCTCTCCCAGAACTTTCTATaGCTTTTCAACAGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: KLFLPSDNCKSEPKGQLLSQNFL*LFNRKE
Trigger: TTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGA...GAGCAGCTGCCCTTTGGGCTCTGATTTACAATTATCAGAAGGCAAAAACAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CCA 90 bp AACAAAGAGAACTGCAACCATTTGGAAAATTTGCAGTATAGACACAAAGGAGCTTTCAGCCTGCAGATTTaGCTCCACATTAGACCGAAG +
Preference number: 4 (lower is better)
Translates to: NKENCNHLENLQYRHKGAFSLQI*LHIRPK
Trigger: CTTCGGTCTAATGTGGAGCCAAATCTGCAGGCTGAA...AGCTCCTTTGTGTCTATACTGCAAATTTTCCAAATGGTTGCAGTTCTCTTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581161.5
CDS-3UTR CCA 90 bp TTTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAATTCAGCCTGCAGATTTaGCTCCACATTAGACCGAAG +
Preference number: 4 (lower is better)
Translates to: FMFPELSMPFQQKGKGTEFSLQI*LHIRPK
Trigger: CTTCGGTCTAATGTGGAGCCAAATCTGCAGGCTGAA...TTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255674.11
ENST00000640769.2
CDS-3UTR CCA 90 bp ATGGACCAGGGCAACCCTTTAAAGACAATCTGTCATTCAGAAGATAAAAACTCACTTGTAGTAATGGACTaGCCTGAGCAGATTTCCAGA +
Preference number: 4 (lower is better)
Translates to: MDQGNPLKTICHSEDKNSLVVMD*PEQISR
Trigger: TCTGGAAATCTGCTCAGGCCAGTCCATTACTACAAG...TGAGTTTTTATCTTCTGAATGACAGATTGTCTTTAAAGGGTTGCCCTGGTCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CCA 90 bp TATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAAGTTCAGCTTTCACTCGTaGCAATGGGTGAGACAACAT +
Preference number: 4 (lower is better)
Translates to: YVPRTFYAFSTERKRHRKFSFHS*QWVRQH
Trigger: ATGTTGTCTCACCCATTGCCACGAGTGAAAGCTGAA...CTTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CCA 90 bp AAGCTGTTTTTGCCTTCTGATAATTGTAAATCAGAGCCCAAAGGGCAGCTGCTCGGTTTAGTGACATTATaGACACCTAAACATTCCTTC +
Preference number: 4 (lower is better)
Translates to: KLFLPSDNCKSEPKGQLLGLVTL*TPKHSF
Trigger: GAAGGAATGTTTAGGTGTCCATAATGTCACTAAACC...GAGCAGCTGCCCTTTGGGCTCTGATTTACAATTATCAGAAGGCAAAAACAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CCA 90 bp TTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAAATAACAGAATGGCCTTaGCAGCAGTGTTCACCTCAC +
Preference number: 4 (lower is better)
Translates to: LCSQNFLCLFNRKEKAQKITEWP*QQCSPH
Trigger: GTGAGGTGAACACTGCTGCCAAGGCCATTCTGTTAT...TTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CCA 90 bp AGTTGTGCATTTATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGGCTCCGTTGTTTCTGAGGTaGAGAGAGAACTTGGATCTC +
Preference number: 4 (lower is better)
Translates to: SCAFMCFICSMQLSIRLAPLFLR*RENLDL
Trigger: GAGATCCAAGTTCTCTCTCCACCTCAGAAACAACGG...AGCCAATCTTATAGACAATTGCATGGAGCAGATGAAACACATAAATGCACAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CCA 90 bp GCACCAGCTTTCCTCAGGAGCATGGCCAGAAGATTAAATAAATGTGTCCATGTGAGAACTGCAACCATTTaGAAAATTTGCAGTATAGAC +
Preference number: 4 (lower is better)
Translates to: APAFLRSMARRLNKCVHVRTATI*KICSID
Trigger: GTCTATACTGCAAATTTTCCAAATGGTTGCAGTTCT...CACATGGACACATTTATTTAATCTTCTGGCCATGCTCCTGAGGAAAGCTGGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
CDS-3UTR CCA 90 bp TGGGAAAGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACAAGAACTGCAACCATTTaGAAAATTTGCAGTATAGAC +
Preference number: 4 (lower is better)
Translates to: WERRGSTLCREVARLQVTRTATI*KICSID
Trigger: GTCTATACTGCAAATTTTCCAAATGGTTGCAGTTCT...TGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCTTTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
CDS-3UTR CCA 90 bp TATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAAGCAGTTCTCTCTCTCATaGGAAAGAAGGGGATCAACA +
Preference number: 4 (lower is better)
Translates to: YVPRTFYAFSTERKRHRKQFSLS*ERRGST
Trigger: TGTTGATCCCCTTCTTTCCCATGAGAGAGAGAACTG...CTTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp TTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAAACAACTGGACGGTGTTaGAGTATCACCAGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: LCSQNFLCLFNRKEKAQKTTGRC*SITSSL
Trigger: GAGAGAACTGGTGATACTCCAACACCGTCCAGTTGT...TTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR TCA 90 bp AAATCAGTAACTCTGGAGAGAACTCTGGCGTCTATTAGAGGACGCTTTGTATCATTTGACAATTCAGTTTaGTTGGTTTGGTATGAGGCA +
Preference number: 4 (lower is better)
Translates to: KSVTLERTLASIRGRFVSFDNSV*LVWYEA
Trigger: TGCCTCATACCAAACCAATCAAACTGAATTGTCAAA...TGATACAAAGCGTCCTCTAATAGACGCCAGAGTTCTCTCCAGAGTTACTGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR TCA 90 bp TGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGGCTTTCAAAGCATGTTTCTCCCATATCCAAAGGTaGATGAACGGATATCCTGGA +
Preference number: 4 (lower is better)
Translates to: CFICSMQLSIRLAFKACFSHIQR*MNGYPG
Trigger: TCCAGGATATCCGTTCATTCACCTTTGGATATGGGA...GAAACATGCTTTGAAAGCCAATCTTATAGACAATTGCATGGAGCAGATGAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR TCA 90 bp CGTTTTAGTTTCAGAGTTCATTTGCTTCAACAGATTATCACTCCCATGATACCAAAAACTGGGGAAGACTaGGCTGCTGGAATTGTAGTT +
Preference number: 4 (lower is better)
Translates to: RFSFRVHLLQQIITPMIPKTGED*AAGIVV
Trigger: AACTACAATTCCAGCAGCTCAGTCTTCCCCAGTTTT...TGGTATCATGGGAGTGATAATCTGTTGAAGCAAATGAACTCTGAAACTAAAACG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp TATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAAGTCACTTTCGGGCTCTTaGATGCCAAATACAGAGATT +
Preference number: 4 (lower is better)
Translates to: YVPRTFYAFSTERKRHRKSLSGS*MPNTEI
Trigger: AATCTCTGTATTTGGCATTCAAGAGCCCGAAAGTGA...CTTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR TCA 90 bp ATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGGCTTTCAAAGCATGTACTCCCATGATACCATaGCAGGTTCCAAGCTATTCT +
Preference number: 4 (lower is better)
Translates to: MCFICSMQLSIRLAFKACTPMIP*QVPSYS
Trigger: AGAATAGCTTGGAACCTGTCATGGTATCATGGGAGT...ACATGCTTTGAAAGCCAATCTTATAGACAATTGCATGGAGCAGATGAAACACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp CAAGCCTCAGAATCATTTGTTGCCCATCTTCTCCAGATGATATATTCAGGAGTAAGAAGTTCTATGAGATaGGCTTGTCGAAAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: QASESFVAHLLQMIYSGVRSSMR*ACRKAF
Trigger: AAAGGCTTTTCGACAAGCTCATCTCATAGAACTTCT...TACTCCTGAATATATCATCTGGAGAAGATGGGCAACAAATGATTCTGAGGCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp GGTGAAGATTTCATATACCTTTTCAACAGTCTCCAACTTAATAACCAGCTCTCTTGTTTCTTAAATACATaGACAGCTGCTGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: GEDFIYLFNSLQLNNQLSCFLNT*TAAAGR
Trigger: CCTGCCTGCAGCAGCTGTGCATGTATTTAAGAAACA...AGAGAGCTGGTTATTAAGTTGGAGACTGTTGAAAAGGTATATGAAATCTTCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR GCA 90 bp GGTGAAGATTTCATATACCTTTTCAACAGTCTCCAACTTAATAACCAGCTCTCTCTTGTTCCAGGTCAATaGTGTCATCATCAATCGTCC +
Preference number: 4 (lower is better)
Translates to: GEDFIYLFNSLQLNNQLSLVPGQ*CHHQSS
Trigger: GGACGATTGATGATGACAGCATTGACCTGGAACAAG...AGAGAGCTGGTTATTAAGTTGGAGACTGTTGAAAAGGTATATGAAATCTTCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR GCA 90 bp TATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAAGTGCTTAGAAGGAGAATaGAGTTACCCAGAGGATCTT +
Preference number: 4 (lower is better)
Translates to: YVPRTFYAFSTERKRHRKCLEGE*SYPEDL
Trigger: AAGATCCTCTGGGTAACTGCATTCTCCTTCTAAGCA...CTTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
CDS-3UTR GCA 90 bp GGCTTTTCAAAGCTGTTTTTGCCTTCTGATAATTGTAAATCAGAGCCCAAAGGGTGTCAGAACTTGCTTTaGTTAGAAGGAGAATGCAGT +
Preference number: 4 (lower is better)
Translates to: GFSKLFLPSDNCKSEPKGCQNLL*LEGECS
Trigger: ACTGCATTCTCCTTCTAAGCAAAGCAAGTTCTGACA...CCCTTTGGGCTCTGATTTACAATTATCAGAAGGCAAAAACAGCTTTGAAAAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR GCA 90 bp AGGTTCAGTTGTGCATTTATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGTCGAAAAGCCTTTaGAGTGTCTCTGGGAGCAAT +
Preference number: 4 (lower is better)
Translates to: RFSCAFMCFICSMQLSIRLSKSL*SVSGSN
Trigger: ATTGCTCCCAGAGACACTGCAAAGGCTTTTCGACAA...TCTTATAGACAATTGCATGGAGCAGATGAAACACATAAATGCACAACTGAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAACAAAGCATGTTTCTGTaGTCTTCTACTGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: LCSQNFLCLFNRKEKAQKQSMFL*SSTDSQ
Trigger: CTGGCTGTCAGTAGAAGAGCACAGAAACATGCTTTG...TTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp ATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGGCTTTCAAAGCATGTCAAAGCATGTTTCTGTaGTCTTCTACTGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: MCFICSMQLSIRLAFKACQSMFL*SSTDSQ
Trigger: CTGGCTGTCAGTAGAAGAGCACAGAAACATGCTTTG...ACATGCTTTGAAAGCCAATCTTATAGACAATTGCATGGAGCAGATGAAACACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp ACTTTCCAGACAGGCAGCAAGCACAGTAATGACTTTTTCATTAGCCAGGATCTTAGCTGCAGAGAAATTTaGATCAATGAATCATCCATC +
Preference number: 4 (lower is better)
Translates to: TFQTGSKHSNDFFISQDLSCREI*INESSI
Trigger: GATGGATGATTCATTGATGCAAATTTCTCTGCAGCT...AAGATCCTGGCTAATGAAAAAGTCATTACTGTGCTTGCTGCCTGTCTGGAAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp AACAAAGAGAACTGCAACCATTTGGAAAATTTGCAGTATAGACACAAAGGAGCTACTCCTTTACAGTCATaGGACAAGGCCAGGTTTGAA +
Preference number: 4 (lower is better)
Translates to: NKENCNHLENLQYRHKGATPLQS*DKARFE
Trigger: TTCAAACCTGGCCTTGTCGCATGACTGTAAAGGAGT...AGCTCCTTTGTGTCTATACTGCAAATTTTCCAAATGGTTGCAGTTCTCTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
CDS-3UTR GCA 90 bp CTTTCTTCTTTATTACACAGCCTTGCAGAAGACAACGGTGAAGATTATACATGTACTCCTTTACAGTCATaGGACAAGGCCAGGTTTGAA +
Preference number: 4 (lower is better)
Translates to: LSSLLHSLAEDNGEDYTCTPLQS*DKARFE
Trigger: TTCAAACCTGGCCTTGTCGCATGACTGTAAAGGAGT...ACATGTATAATCTTCACCGTTGTCTTCTGCAAGGCTGTGTAATAAAGAAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578780.2
ENST00000639487.1
ENST00000640769.2
CDS-3UTR GCA 90 bp TTTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAACTCCTTTACAGTCATaGGACAAGGCCAGGTTTGAA +
Preference number: 4 (lower is better)
Translates to: FMFPELSMPFQQKGKGTETPLQS*DKARFE
Trigger: TTCAAACCTGGCCTTGTCGCATGACTGTAAAGGAGT...TTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp ATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGGCTTTCAAAGCATGTGAGGCAATAAAGGGCTaGTCTTGTGCTTGTATTTGC +
Preference number: 4 (lower is better)
Translates to: MCFICSMQLSIRLAFKACEAIKG*SCACIC
Trigger: GCAAATACAAGCACAAGAGCAGCCCTTTATTGCCTC...ACATGCTTTGAAAGCCAATCTTATAGACAATTGCATGGAGCAGATGAAACACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp AATGCACACTTACTTCTACATAGCCCTTTTCCAGTGTGGATGCTCTGGATAACAGATCTTGGGTTTATTTaGAGGACTGAAGCAAACATT +
Preference number: 4 (lower is better)
Translates to: NAHLLLHSPFPVWMLWITDLGFI*RTEANI
Trigger: AATGTTTGCTTCAGTCCTGCAAATAAACCCAAGATC...TGTTATCCAGAGCATCCACACTGGAAAAGGGCTATGTAGAAGTAAGTGTGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578780.2
ENST00000639487.1
ENST00000640769.2
CDS-3UTR CCA 90 bp AAATCAGTAACTCTGGAGAGAACTCTGGCGTCTATTAGAGGACGCTTTGTATCAACAATTCAGTTTGATTaGTTTGGTATGAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: KSVTLERTLASIRGRFVSTIQFD*FGMRQK
Trigger: CTTCTGCCTCATACCAAACCAATCAAACTGAATTGT...TGATACAAAGCGTCCTCTAATAGACGCCAGAGTTCTCTCCAGAGTTACTGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR CCA 90 bp TTTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAATTCAGCTTTCACTCGTaGCAATGGGTGAGACAACAT +
Preference number: 4 (lower is better)
Translates to: FMFPELSMPFQQKGKGTEFSFHS*QWVRQH
Trigger: ATGTTGTCTCACCCATTGCCACGAGTGAAAGCTGAA...TTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CCA 90 bp AAAGTTTTCTTTGCTAAGGAGTATGCTTCATCCACTCTTCTTTTTACTGATGGGTTCAGCTTTCACTCGTaGCAATGGGTGAGACAACAT +
Preference number: 4 (lower is better)
Translates to: KVFFAKEYASSTLLFTDGFSFHS*QWVRQH
Trigger: ATGTTGTCTCACCCATTGCCACGAGTGAAAGCTGAA...CCCATCAGTAAAAAGAAGAGTGGATGAAGCATACTCCTTAGCAAAGAAAACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CCA 90 bp ATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGGCTTTCAAAGCATGTCTGACTTGTCCTAGATaGAGCCCTCCAAAACTTGAA +
Preference number: 4 (lower is better)
Translates to: MCFICSMQLSIRLAFKACLTCPR*SPPKLE
Trigger: TTCAAGTTTTGGAGGGCTCCATCTAGGACAAGTCAG...ACATGCTTTGAAAGCCAATCTTATAGACAATTGCATGGAGCAGATGAAACACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CCA 90 bp TATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAAGATGACTGCAGAAGCCTaGACAAAGAGGATAGGTATT +
Preference number: 4 (lower is better)
Translates to: YVPRTFYAFSTERKRHRKMTAEA*TKRIGI
Trigger: AATACCTATCCTCTTTGTCCAGGCTTCTGCAGTCAT...CTTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp CCATCAAGCCTCAGAATCATTTGTTGCCCATCTTCTCCAGATGATATATTCAGGTTTTCAGGATATCTTTaGAGGATTTCCCTTCATAGC +
Preference number: 4 (lower is better)
Translates to: PSSLRIICCPSSPDDIFRFSGYL*RISLHS
Trigger: GCTATGAAGGGAAATCCTCCAAAGATATCCTGAAAA...CCTGAATATATCATCTGGAGAAGATGGGCAACAAATGATTCTGAGGCTTGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CCA 90 bp CAGCCAGCAGTGACATCAATGCATTTGCAGCTACTCTTTTCAGGATATCTTTGGAGAACTGCAACCATTTaGAAAATTTGCAGTATAGAC +
Preference number: 4 (lower is better)
Translates to: QPAVTSMHLQLLFSGYLWRTATI*KICSID
Trigger: GTCTATACTGCAAATTTTCCAAATGGTTGCAGTTCT...CCAAAGATATCCTGAAAAGAGTAGCTGCAAATGCATTGATGTCACTGCTGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
CDS-3UTR CCA 90 bp TGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGGCTTTCAAAGCATGTTTCCAGTTCTCTCTCTCATaGGAAAGAAGGGGATCAACA +
Preference number: 4 (lower is better)
Translates to: CFICSMQLSIRLAFKACFQFSLS*ERRGST
Trigger: TGTTGATCCCCTTCTTTCCCATGAGAGAGAGAACTG...GAAACATGCTTTGAAAGCCAATCTTATAGACAATTGCATGGAGCAGATGAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CCA 90 bp TTTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAAGCCCTTTTCCAGTGTaGATGCTCTGGATAACAGAA +
Preference number: 4 (lower is better)
Translates to: FMFPELSMPFQQKGKGTESPFPV*MLWITE
Trigger: TTCTGTTATCCAGAGCATCCACACTGGAAAAGGGCT...TTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000578780.2
ENST00000639487.1
ENST00000640769.2
3UTR CAA 72 bp ACTCTATTCTTCATGATGTTTTGGGCTGAGCTAAATTaGAACCCAGGCTTATACAGCCCCAACTCTATTTCT +
Preference number: 4 (lower is better)
Translates to: TLFFMMFWAELN*NPGLYSPNSIS
Trigger: AGAAATAGAGTTGGGGCTGTATAAGCCTGGGTTCAAATTTAGCTCAGCCCAAAACATCATGAAGAATAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578780.2
ENST00000639487.1
ENST00000640769.2
CDS-3UTR TCA 90 bp AGCCTCAGAATCATTTGTTGCCCATCTTCTCCAGATGATATATTCAGGAGTAACGCCACAACAGCTTCATaGATATTTGGATATTCCAAA +
Preference number: 4 (lower is better)
Translates to: SLRIICCPSSPDDIFRSNATTAS*IFGYSK
Trigger: TTTGGAATATCCAAATATTCATGAAGCTGTTGTGGC...GTTACTCCTGAATATATCATCTGGAGAAGATGGGCAACAAATGATTCTGAGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583043.5
CDS-3UTR TCA 90 bp AGGTTCAGTTGTGCATTTATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGAATCATCAATCGTCCCTaGAGCAGGTATAACAGAATG +
Preference number: 4 (lower is better)
Translates to: RFSCAFMCFICSMQLSIRIINRP*SRYNRM
Trigger: CATTCTGTTATACCTGCTTCAGGGACGATTGATGAT...TCTTATAGACAATTGCATGGAGCAGATGAAACACATAAATGCACAACTGAACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR TCA 90 bp GGTGAAGATTTCATATACCTTTTCAACAGTCTCCAACTTAATAACCAGCTCTCTTGGTGTCCAATTACATaGACAGGTAGATGGTACCTT +
Preference number: 4 (lower is better)
Translates to: GEDFIYLFNSLQLNNQLSWCPIT*TGRWYL
Trigger: AAGGTACCATCTACCTGTTCATGTAATTGGACACCA...AGAGAGCTGGTTATTAAGTTGGAGACTGTTGAAAAGGTATATGAAATCTTCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR TCA 90 bp CTTTCTTCTTTATTACACAGCCTTGCAGAAGACAACGGTGAAGATTATACATGTTGGTGTCCAATTACATaGACAGGTAGATGGTACCTT +
Preference number: 4 (lower is better)
Translates to: LSSLLHSLAEDNGEDYTCWCPIT*TGRWYL
Trigger: AAGGTACCATCTACCTGTTCATGTAATTGGACACCA...ACATGTATAATCTTCACCGTTGTCTTCTGCAAGGCTGTGTAATAAAGAAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640769.2
CDS-3UTR TCA 90 bp TTGGTACATATGGTGAGAATTCCAATGATATTGGTGATAAGAGGTTTCACAAGCCACCATACTACATTCTaGCTGGTCCAGAAGAATGTT +
Preference number: 4 (lower is better)
Translates to: LVHMVRIPMILVIRGFTSHHTTF*LVQKNV
Trigger: AACATTCTTCTGGACCAGTCAGAATGTAGTATGGTG...GCTTGTGAAACCTCTTATCACCAATATCATTGGAATTCTCACCATATGTACCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp GTACATATGGTGAGAATTCCAATGATATTGGTGATAAGAGGTTTCACAAGCTCAGAGCCCTCCAAAACTTaGATGAGTCATCTAAACCAT +
Preference number: 4 (lower is better)
Translates to: VHMVRIPMILVIRGFTSSEPSKT*MSHLNH
Trigger: ATGGTTTAGATGACTCATTCAAGTTTTGGAGGGCTC...TGAGCTTGTGAAACCTCTTATCACCAATATCATTGGAATTCTCACCATATGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp CTTTCTTCTTTATTACACAGCCTTGCAGAAGACAACGGTGAAGATTATACATGTGAGCCCTCCAAAACTTaGATGAGTCATCTAAACCAT +
Preference number: 4 (lower is better)
Translates to: LSSLLHSLAEDNGEDYTCEPSKT*MSHLNH
Trigger: ATGGTTTAGATGACTCATTCAAGTTTTGGAGGGCTC...ACATGTATAATCTTCACCGTTGTCTTCTGCAAGGCTGTGTAATAAAGAAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640769.2
CDS-3UTR TCA 90 bp TATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAAGTACAGAGAAGTTCTATaGGATGAGCTTGTCGAAAAG +
Preference number: 4 (lower is better)
Translates to: YVPRTFYAFSTERKRHRKYREVL*DELVEK
Trigger: CTTTTCGACAAGCTCATCTCATAGAACTTCTCTGTA...CTTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp CTTTCTTCTTTATTACACAGCCTTGCAGAAGACAACGGTGAAGATTATACATGTAACCAAATGTTGGACTaGTGGGGGATACTTAACCAA +
Preference number: 4 (lower is better)
Translates to: LSSLLHSLAEDNGEDYTCNQMLD*WGILNQ
Trigger: TTGGTTAAGTATCCCCCAGCAGTCCAACATTTGGTT...ACATGTATAATCTTCACCGTTGTCTTCTGCAAGGCTGTGTAATAAAGAAGAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640769.2
CDS-3UTR GCA 90 bp TTCAGTTGTGCATTTATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGGGCGGCACTTCCATCTaGTGGAAATTACTTTTGTCT +
Preference number: 4 (lower is better)
Translates to: FSCAFMCFICSMQLSIRLGGTSI*WKLLLS
Trigger: AGACAAAAGTAATTTCCAGCAGATGGAAGTGCCGCC...CAATCTTATAGACAATTGCATGGAGCAGATGAAACACATAAATGCACAACTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581161.5
CDS-3UTR GCA 90 bp TTTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAACTATACCAAAAAGGCTaGTGTCATCCCAGATATCTG +
Preference number: 4 (lower is better)
Translates to: FMFPELSMPFQQKGKGTELYQKG*CHPRYL
Trigger: CAGATATCTGGGATGACAGCAGCCTTTTTGGTATAG...TTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR GCA 90 bp AAAGTTTTCTTTGCTAAGGAGTATGCTTCATCCACTCTTCTTTTTACTGATGGGCTATACCAAAAAGGCTaGTGTCATCCCAGATATCTG +
Preference number: 4 (lower is better)
Translates to: KVFFAKEYASSTLLFTDGLYQKG*CHPRYL
Trigger: CAGATATCTGGGATGACAGCAGCCTTTTTGGTATAG...CCCATCAGTAAAAAGAAGAGTGGATGAAGCATACTCCTTAGCAAAGAAAACTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR GCA 90 bp GGTGAAGATTTCATATACCTTTTCAACAGTCTCCAACTTAATAACCAGCTCTCTTGCTTAGAAGGAGAATaGAGTTACCCAGAGGATCTT +
Preference number: 4 (lower is better)
Translates to: GEDFIYLFNSLQLNNQLSCLEGE*SYPEDL
Trigger: AAGATCCTCTGGGTAACTGCATTCTCCTTCTAAGCA...AGAGAGCTGGTTATTAAGTTGGAGACTGTTGAAAAGGTATATGAAATCTTCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR GCA 90 bp TCTTGTGCTTGTATTTGCTCATCTCTGTTAGTAAGTCTAGACAGCCATCAAGCCGTTTCAGAGTTCATTTaGTTCAACAGATTATCACTC +
Preference number: 4 (lower is better)
Translates to: SCACICSSLLVSLDSHQAVSEFI*FNRLSL
Trigger: GAGTGATAATCTGTTGAAGCAAATGAACTCTGAAAC...GGCTTGATGGCTGTCTAGACTTACTAACAGAGATGAGCAAATACAAGCACAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR GCA 90 bp TTTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAATATGAGGGTAGCATCTaGAATGCTACAGAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: FMFPELSMPFQQKGKGTEYEGSI*NATEKF
Trigger: GAACTTCTCTGTAGCATTGCAGATGCTACCCTCATA...TTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TTCAGTTGTGCATTTATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGCAAAGCATGTTTCTGTaGTCTTCTACTGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: FSCAFMCFICSMQLSIRLQSMFL*SSTDSQ
Trigger: CTGGCTGTCAGTAGAAGAGCACAGAAACATGCTTTG...CAATCTTATAGACAATTGCATGGAGCAGATGAAACACATAAATGCACAACTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TTCTTGCGTTTTAGTTTCAGAGTTCATTTGCTTCAACAGATTATCACTCCCATGCAGTTTCTTAGGAGCTaGATGGCAATGCTTAACTCT +
Preference number: 4 (lower is better)
Translates to: FLRFSFRVHLLQQIITPMQFLRS*MAMLNS
Trigger: AGAGTTAAGCATTGCCATGCAGCTCCTAAGAAACTG...CATGGGAGTGATAATCTGTTGAAGCAAATGAACTCTGAAACTAAAACGCAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR GCA 90 bp TTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAACAGTTTCTTAGGAGCTaGATGGCAATGCTTAACTCT +
Preference number: 4 (lower is better)
Translates to: LCSQNFLCLFNRKEKAQKQFLRS*MAMLNS
Trigger: AGAGTTAAGCATTGCCATGCAGCTCCTAAGAAACTG...TTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp AGCCTCAGAATCATTTGTTGCCCATCTTCTCCAGATGATATATTCAGGAGTAACAGCTGCAGAGAAATTTaGATCAATGAATCATCCATC +
Preference number: 4 (lower is better)
Translates to: SLRIICCPSSPDDIFRSNSCREI*INESSI
Trigger: GATGGATGATTCATTGATGCAAATTTCTCTGCAGCT...GTTACTCCTGAATATATCATCTGGAGAAGATGGGCAACAAATGATTCTGAGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp AACACAGGGACCCTGCCAAGTATAATCCTTTATAATTTCTGTAGGCATTGGAATCTCAGAATCATTTGTTaGCCATCTTCTCCAGATGAT +
Preference number: 4 (lower is better)
Translates to: NTGTLPSIILYNFCRHWNLRIIC*PSSPDD
Trigger: ATCATCTGGAGAAGATGGGCAACAAATGATTCTGAG...ATTCCAATGCCTACAGAAATTATAAAGGATTATACTTGGCAGGGTCCCTGTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR GCA 90 bp CCCTTTACAAATAATGCACACTTACTTCTACATAGCCCTTTTCCAGTGTGGATGGATCTTGGGTTTATTTaGAGGACTGAAGCAAACATT +
Preference number: 4 (lower is better)
Translates to: PFTNNAHLLLHSPFPVWMDLGFI*RTEANI
Trigger: AATGTTTGCTTCAGTCCTGCAAATAAACCCAAGATC...CATCCACACTGGAAAAGGGCTATGTAGAAGTAAGTGTGCATTATTTGTAAAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578780.2
ENST00000639487.1
ENST00000640769.2
CDS-3UTR CCA 90 bp TATCACTCCCATGATACCATGACAGGTTCCAAGCTATTCTCAGCATATCTGACAGACAAAGAAGAATTTTaGGAAACTGTGTCGTGTTTA +
Preference number: 4 (lower is better)
Translates to: YHSHDTMTGSKLFSAYLTDKEEF*ETVSCL
Trigger: TAAACACGACACAGTTTCCCAAAATTCTTCTTTGTC...TGTCAGATATGCTGAGAATAGCTTGGAACCTGTCATGGTATCATGGGAGTGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CCA 90 bp GCATTTATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGGCTTTCAAATTCAGTTTCCAGCTCTaGCAGATCTATGTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: AFMCFICSMQLSIRLAFKFSFQL*QIYVSH
Trigger: ATGGGACACATAGATCTGCCAGAGCTGGAAACTGAA...TTTGAAAGCCAATCTTATAGACAATTGCATGGAGCAGATGAAACACATAAATGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CCA 90 bp TATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAAGATACTACATTCTGACTaGTCCAGAAGAATGTTCACC +
Preference number: 4 (lower is better)
Translates to: YVPRTFYAFSTERKRHRKILHSD*SRRMFT
Trigger: GGTGAACATTCTTCTGGACCAGTCAGAATGTAGTAT...CTTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp TTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAAATGACTGCAGAAGCCTaGACAAAGAGGATAGGTATT +
Preference number: 4 (lower is better)
Translates to: LCSQNFLCLFNRKEKAQKMTAEA*TKRIGI
Trigger: AATACCTATCCTCTTTGTCCAGGCTTCTGCAGTCAT...TTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp TTTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAATGACTGCAGAAGCCTaGACAAAGAGGATAGGTATT +
Preference number: 4 (lower is better)
Translates to: FMFPELSMPFQQKGKGTEMTAEA*TKRIGI
Trigger: AATACCTATCCTCTTTGTCCAGGCTTCTGCAGTCAT...TTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp GCATTTATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGGCTTTCAAAGTTTTGCTCTTAGCCTaGAGATGCCCTTTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: AFMCFICSMQLSIRLAFKVLLLA*RCPFAS
Trigger: AGAAGCAAAAGGGCATCTCCAGGCTAAGAGCAAAAC...TTTGAAAGCCAATCTTATAGACAATTGCATGGAGCAGATGAAACACATAAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CCA 90 bp CCATCAAGCCTCAGAATCATTTGTTGCCCATCTTCTCCAGATGATATATTCAGGAGTGTTCTCTCCATTTaGAAAATTTGCAGTATAGAC +
Preference number: 4 (lower is better)
Translates to: PSSLRIICCPSSPDDIFRSVLSI*KICSID
Trigger: GTCTATACTGCAAATTTTCCAAATGGAGAGAACACT...CCTGAATATATCATCTGGAGAAGATGGGCAACAAATGATTCTGAGGCTTGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679113.1
3UTR CAA 72 bp TCCCAATATCAGACAGGAAGTTACAGGTGCATTCAATaGAATAAACGGCCTCTGCAGTTCGTTTATAAATAC +
Preference number: 4 (lower is better)
Translates to: SQYQTGSYRCIQ*NKRPLQFVYKY
Trigger: GTATTTATAAACGAACTGCAGAGGCCGTTTATTCAATTGAATGCACCTGTAACTTCCTGTCTGATATTGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581161.5
CDS-3UTR TCA 90 bp AGGTTCAGTTGTGCATTTATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGAAAACCTGGATCTCGGTaGAAGTTAAGTCTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: RFSCAFMCFICSMQLSIRKPGSR*KLSLFL
Trigger: AAGAAACAGACTTAACTTTCACCGAGATCCAGGTTT...TCTTATAGACAATTGCATGGAGCAGATGAAACACATAAATGCACAACTGAACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR TCA 90 bp GCATTTATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGGCTTTCAAAATCATCAATCGTCCCTaGAGCAGGTATAACAGAATG +
Preference number: 4 (lower is better)
Translates to: AFMCFICSMQLSIRLAFKIINRP*SRYNRM
Trigger: CATTCTGTTATACCTGCTTCAGGGACGATTGATGAT...TTTGAAAGCCAATCTTATAGACAATTGCATGGAGCAGATGAAACACATAAATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR TCA 90 bp TTCAGTTGTGCATTTATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGAGATTATCACTCCCATaGTACCATGACAGGTTCCAA +
Preference number: 4 (lower is better)
Translates to: FSCAFMCFICSMQLSIRLRLSLP*YHDRFQ
Trigger: TTGGAACCTGTCATGGTATCATGGGAGTGATAATCT...CAATCTTATAGACAATTGCATGGAGCAGATGAAACACATAAATGCACAACTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp TTTTCTTTGCTAAGGAGTATGCTTCATCCACTCTTCTTTTTACTGATGGGCTTTATCTCATGGGATAAGTaGAGCAAGCAAAGAATTGTG +
Preference number: 4 (lower is better)
Translates to: FSLLRSMLHPLFFLLMGFISWDK*SKQRIV
Trigger: CACAATTCTTTGCTTGCTTCACTTATCCCATGAGAT...AAAGCCCATCAGTAAAAAGAAGAGTGGATGAAGCATACTCCTTAGCAAAGAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp TTGGTACATATGGTGAGAATTCCAATGATATTGGTGATAAGAGGTTTCACAAGCCAAGCCAATCCTTGTTaGGTAGGAATATGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LVHMVRIPMILVIRGFTSQANPC*VGICSS
Trigger: TGAAGAACATATTCCTACTCAACAAGGATTGGCTTG...GCTTGTGAAACCTCTTATCACCAATATCATTGGAATTCTCACCATATGTACCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR TCA 90 bp AGGTTCAGTTGTGCATTTATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGAAGAAGTTCTATGAGATaGGCTTGTCGAAAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: RFSCAFMCFICSMQLSIRRSSMR*ACRKAF
Trigger: AAAGGCTTTTCGACAAGCTCATCTCATAGAACTTCT...TCTTATAGACAATTGCATGGAGCAGATGAAACACATAAATGCACAACTGAACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR TCA 90 bp TTCAGTTGTGCATTTATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGCGACAAGGCCAGGTTTaGAAGAAGCATAAAAACCAT +
Preference number: 4 (lower is better)
Translates to: FSCAFMCFICSMQLSIRLRQGQV*KKHKNH
Trigger: ATGGTTTTTATGCTTCTTTCAAACCTGGCCTTGTCG...CAATCTTATAGACAATTGCATGGAGCAGATGAAACACATAAATGCACAACTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TTTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAGTGAGCTTCAAGAGCTaGTTCTTTACATTCCTCATT +
Preference number: 4 (lower is better)
Translates to: FMFPELSMPFQQKGKGTEVSFKS*FFTFLI
Trigger: AATGAGGAATGTAAAGAAGCAGCTCTTGAAGCTCAC...TTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp AGTTGTGCATTTATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGGCTGTGAGCTTCAAGAGCTaGTTCTTTACATTCCTCATT +
Preference number: 4 (lower is better)
Translates to: SCAFMCFICSMQLSIRLAVSFKS*FFTFLI
Trigger: AATGAGGAATGTAAAGAAGCAGCTCTTGAAGCTCAC...AGCCAATCTTATAGACAATTGCATGGAGCAGATGAAACACATAAATGCACAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp AGCCTCAGAATCATTTGTTGCCCATCTTCTCCAGATGATATATTCAGGAGTAACACCATTTGGAAAATTTaGAGTATAGACACAAAGGAG +
Preference number: 4 (lower is better)
Translates to: SLRIICCPSSPDDIFRSNTIWKI*SIDTKE
Trigger: CTCCTTTGTGTCTATACTGCAAATTTTCCAAATGGT...GTTACTCCTGAATATATCATCTGGAGAAGATGGGCAACAAATGATTCTGAGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
CDS-3UTR GCA 90 bp TTTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAACTCAGAATCATTTGTTaGCCATCTTCTCCAGATGAT +
Preference number: 4 (lower is better)
Translates to: FMFPELSMPFQQKGKGTELRIIC*PSSPDD
Trigger: ATCATCTGGAGAAGATGGGCAACAAATGATTCTGAG...TTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TTTTCTTTGCTAAGGAGTATGCTTCATCCACTCTTCTTTTTACTGATGGGCTTTCTCAGAATCATTTGTTaGCCATCTTCTCCAGATGAT +
Preference number: 4 (lower is better)
Translates to: FSLLRSMLHPLFFLLMGFLRIIC*PSSPDD
Trigger: ATCATCTGGAGAAGATGGGCAACAAATGATTCTGAG...AAAGCCCATCAGTAAAAAGAAGAGTGGATGAAGCATACTCCTTAGCAAAGAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp CAAGCCTCAGAATCATTTGTTGCCCATCTTCTCCAGATGATATATTCAGGAGTATCTTGTGCTTGTATTTaGTCATCTCTGTTAGTAAGT +
Preference number: 4 (lower is better)
Translates to: QASESFVAHLLQMIYSGVSCACI*SSLLVS
Trigger: ACTTACTAACAGAGATGAGCAAATACAAGCACAAGA...TACTCCTGAATATATCATCTGGAGAAGATGGGCAACAAATGATTCTGAGGCTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CCA 90 bp AGGTTCAGTTGTGCATTTATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGAATAAGGGCAAAACTATaGAGTAAGGACTCACAGCAT +
Preference number: 4 (lower is better)
Translates to: RFSCAFMCFICSMQLSIRIRAKL*SKDSQH
Trigger: ATGCTGTGAGTCCTTACTCCATAGTTTTGCCCTTAT...TCTTATAGACAATTGCATGGAGCAGATGAAACACATAAATGCACAACTGAACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CCA 90 bp TTTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAATAAGGGCAAAACTATaGAGTAAGGACTCACAGCAT +
Preference number: 4 (lower is better)
Translates to: FMFPELSMPFQQKGKGTEIRAKL*SKDSQH
Trigger: ATGCTGTGAGTCCTTACTCCATAGTTTTGCCCTTAT...TTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
ENST00000679113.1
CDS-3UTR CCA 90 bp TTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAAATAAGGGCAAAACTATaGAGTAAGGACTCACAGCAT +
Preference number: 4 (lower is better)
Translates to: LCSQNFLCLFNRKEKAQKIRAKL*SKDSQH
Trigger: ATGCTGTGAGTCCTTACTCCATAGTTTTGCCCTTAT...TTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
ENST00000679113.1
CDS-3UTR CCA 90 bp TTCAGTTGTGCATTTATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGATGACTGCAGAAGCCTaGACAAAGAGGATAGGTATT +
Preference number: 4 (lower is better)
Translates to: FSCAFMCFICSMQLSIRLMTAEA*TKRIGI
Trigger: AATACCTATCCTCTTTGTCCAGGCTTCTGCAGTCAT...CAATCTTATAGACAATTGCATGGAGCAGATGAAACACATAAATGCACAACTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CCA 90 bp TATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAAGTTTTCAGGATATCTTTaGAGGATTTCCCTTCATAGC +
Preference number: 4 (lower is better)
Translates to: YVPRTFYAFSTERKRHRKFSGYL*RISLHS
Trigger: GCTATGAAGGGAAATCCTCCAAAGATATCCTGAAAA...CTTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
3UTR CAA 72 bp ATTCTTAGTGGTCAGTGTTCTCTCCATTTGGAAAATTaGCAGTATAGACACAAAGGAGCTGCAGAGAAATTT +
Preference number: 4 (lower is better)
Translates to: ILSGQCSLHLEN*QYRHKGAAEKF
Trigger: AAATTTCTCTGCAGCTCCTTTGTGTCTATACTGCAAATTTTCCAAATGGAGAGAACACTGACCACTAAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679113.1
CDS-3UTR TCA 90 bp TTCTTGCGTTTTAGTTTCAGAGTTCATTTGCTTCAACAGATTATCACTCCCATGGCCACAACAGCTTCATaGATATTTGGATATTCCAAA +
Preference number: 4 (lower is better)
Translates to: FLRFSFRVHLLQQIITPMATTAS*IFGYSK
Trigger: TTTGGAATATCCAAATATTCATGAAGCTGTTGTGGC...CATGGGAGTGATAATCTGTTGAAGCAAATGAACTCTGAAACTAAAACGCAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000583043.5
ENST00000638251.1
CDS-3UTR TCA 90 bp GCATTTATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGGCTTTCAAACAAGCCAATCCTTGTTaGGTAGGAATATGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: AFMCFICSMQLSIRLAFKQANPC*VGICSS
Trigger: TGAAGAACATATTCCTACTCAACAAGGATTGGCTTG...TTTGAAAGCCAATCTTATAGACAATTGCATGGAGCAGATGAAACACATAAATGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR GCA 90 bp TTTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAAGCTGCAGAGAAATTTaGATCAATGAATCATCCATC +
Preference number: 4 (lower is better)
Translates to: FMFPELSMPFQQKGKGTESCREI*INESSI
Trigger: GATGGATGATTCATTGATGCAAATTTCTCTGCAGCT...TTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TTTTCTTTGCTAAGGAGTATGCTTCATCCACTCTTCTTTTTACTGATGGGCTTTTCCCAGAACTTTCTATaGCTTTTCAACAGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: FSLLRSMLHPLFFLLMGFSQNFL*LFNRKE
Trigger: TTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGA...AAAGCCCATCAGTAAAAAGAAGAGTGGATGAAGCATACTCCTTAGCAAAGAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CCA 90 bp CTTTCTTCTTTATTACACAGCCTTGCAGAAGACAACGGTGAAGATTATACATGTACAATTCAGTTTGATTaGTTTGGTATGAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LSSLLHSLAEDNGEDYTCTIQFD*FGMRQK
Trigger: CTTCTGCCTCATACCAAACCAATCAAACTGAATTGT...ACATGTATAATCTTCACCGTTGTCTTCTGCAAGGCTGTGTAATAAAGAAGAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640769.2
CDS-3UTR CCA 90 bp TTCAGTTGTGCATTTATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGAATGAACGGATATCCTaGAGTTTACATGAGCATGAC +
Preference number: 4 (lower is better)
Translates to: FSCAFMCFICSMQLSIRLNERIS*SLHEHD
Trigger: GTCATGCTCATGTAAACTCCAGGATATCCGTTCATT...CAATCTTATAGACAATTGCATGGAGCAGATGAAACACATAAATGCACAACTGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CCA 90 bp TTCAGTTGTGCATTTATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGCAAACTGAAGACCGATaGCAAAGAAGGTTTATTGGA +
Preference number: 4 (lower is better)
Translates to: FSCAFMCFICSMQLSIRLQTEDR*QRRFIG
Trigger: TCCAATAAACCTTCTTTGCCATCGGTCTTCAGTTTG...CAATCTTATAGACAATTGCATGGAGCAGATGAAACACATAAATGCACAACTGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CCA 90 bp TATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAAGAATTTCTGTAGGCATTaGAATTACAAGGAGATTCTG +
Preference number: 4 (lower is better)
Translates to: YVPRTFYAFSTERKRHRKNFCRH*NYKEIL
Trigger: CAGAATCTCCTTGTAATTCCAATGCCTACAGAAATT...CTTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CCA 90 bp AACAAAGAGAACTGCAACCATTTGGAAAATTTGCAGTATAGACACAAAGGAGCTTTTTCAGGATATCTTTaGAGGATTTCCCTTCATAGC +
Preference number: 4 (lower is better)
Translates to: NKENCNHLENLQYRHKGAFSGYL*RISLHS
Trigger: GCTATGAAGGGAAATCCTCCAAAGATATCCTGAAAA...AGCTCCTTTGTGTCTATACTGCAAATTTTCCAAATGGTTGCAGTTCTCTTTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
CDS-3UTR CCA 90 bp AGTTGTGCATTTATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGGCTTTTTCAGGATATCTTTaGAGGATTTCCCTTCATAGC +
Preference number: 4 (lower is better)
Translates to: SCAFMCFICSMQLSIRLAFSGYL*RISLHS
Trigger: GCTATGAAGGGAAATCCTCCAAAGATATCCTGAAAA...AGCCAATCTTATAGACAATTGCATGGAGCAGATGAAACACATAAATGCACAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR GCA 90 bp TTTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAGTTTCAGAGTTCATTTaGTTCAACAGATTATCACTC +
Preference number: 4 (lower is better)
Translates to: FMFPELSMPFQQKGKGTEVSEFI*FNRLSL
Trigger: GAGTGATAATCTGTTGAAGCAAATGAACTCTGAAAC...TTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
ENST00000679113.1
CDS-3UTR GCA 90 bp TTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAAACCATTTGGAAAATTTaGAGTATAGACACAAAGGAG +
Preference number: 4 (lower is better)
Translates to: LCSQNFLCLFNRKEKAQKTIWKI*SIDTKE
Trigger: CTCCTTTGTGTCTATACTGCAAATTTTCCAAATGGT...TTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
CDS-3UTR CCA 90 bp TTTTCTTTGCTAAGGAGTATGCTTCATCCACTCTTCTTTTTACTGATGGGCTTTGACAAAGAAGAATTTTaGGAAACTGTGTCGTGTTTA +
Preference number: 4 (lower is better)
Translates to: FSLLRSMLHPLFFLLMGFDKEEF*ETVSCL
Trigger: TAAACACGACACAGTTTCCCAAAATTCTTCTTTGTC...AAAGCCCATCAGTAAAAAGAAGAGTGGATGAAGCATACTCCTTAGCAAAGAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CCA 90 bp CTTTCTTCTTTATTACACAGCCTTGCAGAAGACAACGGTGAAGATTATACATGTGACAAAGAAGAATTTTaGGAAACTGTGTCGTGTTTA +
Preference number: 4 (lower is better)
Translates to: LSSLLHSLAEDNGEDYTCDKEEF*ETVSCL
Trigger: TAAACACGACACAGTTTCCCAAAATTCTTCTTTGTC...ACATGTATAATCTTCACCGTTGTCTTCTGCAAGGCTGTGTAATAAAGAAGAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640769.2
3UTR CAA 72 bp AGTTGTGCATTTATGTGTTTCATCTGCTCCATGCAATaGTCTATAAGATTGGCTTTCAAAGCATGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: SCAFMCFICSMQ*SIRLAFKACFC
Trigger: ACAGAAACATGCTTTGAAAGCCAATCTTATAGACAATTGCATGGAGCAGATGAAACACATAAATGCACAACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS GCA 90 bp ACGCTGCATCCCAGTCCTGGCCATCTCCTCTGGGTCGCTGGCCTGTaGGCCCAACCACAGAAGGCCGAGGGCTGCTGCTTCCTGGGGAAG +
Preference number: 5 (lower is better)
Translates to: TLHPSPGHLLWVAGL*AQPQKAEGCCFLGK
Trigger: CTTCCCCAGGAAGCAGCAGCCCTCGGCCTTCTGTGGTTGGGCGCACAGGCCAGCGACCCAGAGGAGATGGCCAGGACTGGGATGCAGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000581583.1
ENST00000583043.5
ENST00000638251.1
ENST00000640376.1
ENST00000640736.1
ENST00000640769.2
CDS CCA 90 bp CTAGAGGACGCTGCATCCCAGTCCTGGCCATCTCCTCTGGGTCGCTaGCCTGTGCGCCCAACCACAGAAGGCCGAGGGCTGCTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: LEDAASQSWPSPLGR*PVRPTTEGRGLLLP
Trigger: AGGAAGCAGCAGCCCTCGGCCTTCTGTGGTTGGGCGCACAGGCCAGCGACCCAGAGGAGATGGCCAGGACTGGGATGCAGCGTCCTCTAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000581583.1
ENST00000583043.5
ENST00000638251.1
ENST00000640376.1
ENST00000640736.1
ENST00000640769.2
CDS GCA 90 bp CTCTGGGTCGCTGGCCTGTGCGCCCAACCACAGAAGGCCGAGGGCTaGTGCTTCCTGGGGAAGGATTCTGGGAATGATGAGTACCTCTTG +
Preference number: 5 (lower is better)
Translates to: LWVAGLCAQPQKAEG*CFLGKDSGNDEYLL
Trigger: CAAGAGGTACTCATCATTCCCAGAATCCTTCCCCAGGAAGCAGCAGCCCTCGGCCTTCTGTGGTTGGGCGCACAGGCCAGCGACCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000581583.1
ENST00000583043.5
ENST00000638251.1
ENST00000640376.1
ENST00000640736.1
ENST00000640769.2
CDS GCA 90 bp GAGTTTCCTGATGAGCCCTGCCAGGACCATCTCGTCCCGTCAATCTaGAGCCGCCGGAGAATTAAACTGCCGCGCCACTGCGTCCAGCCA +
Preference number: 5 (lower is better)
Translates to: EFPDEPCQDHLVPSI*SRRRIKLPRHCVQP
Trigger: TGGCTGGACGCAGTGGCGCGGCAGTTTAATTCTCCGGCGGCTGCAGATTGACGGGACGAGATGGTCCTGGCAGGGCTCATCAGGAAACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581583.1
CDS CCA 90 bp AGAGACACTGCTAGCAGTCACCTAGAGGACGCTGCATCCCAGTCCTaGCCATCTCCTCTGGGTCGCTGGCCTGTGCGCCCAACCACAGAA +
Preference number: 5 (lower is better)
Translates to: RDTASSHLEDAASQS*PSPLGRWPVRPTTE
Trigger: TTCTGTGGTTGGGCGCACAGGCCAGCGACCCAGAGGAGATGGCCAGGACTGGGATGCAGCGTCCTCTAGGTGACTGCTAGCAGTGTCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640736.1
CDS-3UTR CAA 90 bp ATTGCAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGACAAGCCTGCACATGGCCGCTGTCCAGTGCTaGGCCAGGGCCACGGTAACA +
Preference number: 5 (lower is better)
Translates to: IASWQYTGQDTWQTSLHMAAVQC*ARATVT
Trigger: TGTTACCGTGGCCCTGGCCAAGCACTGGACAGCGGC...CATGTGCAGGCTTGTCTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS GCA 90 bp CCATCTCCCTGGGACAGAGCACCTGGGGGAAAGGGCGGCTGTGGGTaGAGCTTCAGCAGACTTAAATGTTCCTGCCTGCTGTCTCTGAAG +
Preference number: 5 (lower is better)
Translates to: PSPWDRAPGGKGGCG*SFSRLKCSCLLSLK
Trigger: CTTCAGAGACAGCAGGCAGGAACATTTAAGTCTGCTGAAGCTGCACCCACAGCCGCCCTTTCCCCCAGGTGCTCTGTCCCAGGGAGATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638799.1
CDS TCA 90 bp GGAAGGAGCAGGCAGCAATCTTTGCTCTTCTGTAGCCTCTGCTGGTaGTACCCAGGCAAACAGGGGCAGGAGTGGACCTCCAGCCAACTC +
Preference number: 5 (lower is better)
Translates to: GRSRQQSLLFCSLCW*YPGKQGQEWTSSQL
Trigger: GAGTTGGCTGGAGGTCCACTCCTGCCCCTGTTTGCCTGGGTATCACCAGCAGAGGCTACAGAAGAGCAAAGATTGCTGCCTGCTCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638799.1
CDS CCA 90 bp CAGGTGTTGACAGACACATCATACAGGAGAGCTCTAGCTGGCATCTaGGGGGTGCCCTCTGGGATGAAGCTTCCAGAGGAAGGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: QVLTDTSYRRALAGI*GVPSGMKLPEEGAG
Trigger: GCCTGCTCCTTCCTCTGGAAGCTTCATCCCAGAGGGCACCCCCCAGATGCCAGCTAGAGCTCTCCTGTATGATGTGTCTGTCAACACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638799.1
CDS-3UTR CAA 90 bp AGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCGCCGCTGTCCAGTGCTaGGCCAGGGCCACGGTAACA +
Preference number: 5 (lower is better)
Translates to: SCYTQLASTLAPLLMTVSAAVQC*ARATVT
Trigger: TGTTACCGTGGCCCTGGCCAAGCACTGGACAGCGGC...GCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TGGGCAGGGGAGCAGAAAGAGATGAATCATGAGGTGGCCGTGGTGATGTACTTTGCCGCTGTCCAGTGCTaGGCCAGGGCCACGGTAACA +
Preference number: 5 (lower is better)
Translates to: WAGEQKEMNHEVAVVMYFAAVQC*ARATVT
Trigger: TGTTACCGTGGCCCTGGCCAAGCACTGGACAGCGGC...AAAGTACATCACCACGGCCACCTCATGATTCATCTCTTTCTGCTCCCCTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CAA 90 bp GCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGGCCGCTGTCCAGTGCTaGGCCAGGGCCACGGTAACA +
Preference number: 5 (lower is better)
Translates to: AQKVVSCYYFWRAATTGRAAVQC*ARATVT
Trigger: TGTTACCGTGGCCCTGGCCAAGCACTGGACAGCGGC...CCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS GCA 90 bp CCCTCTGGGATGAAGCTTCCAGAGGAAGGAGCAGGCAGCAATCTTTaGTCTTCTGTAGCCTCTGCTGGTGATACCCAGGCAAACAGGGGC +
Preference number: 5 (lower is better)
Translates to: PSGMKLPEEGAGSNL*SSVASAGDTQANRG
Trigger: GCCCCTGTTTGCCTGGGTATCACCAGCAGAGGCTACAGAAGAGCAAAGATTGCTGCCTGCTCCTTCCTCTGGAAGCTTCATCCCAGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638799.1
CDS-3UTR CAA 90 bp GGCCAGGGCCACGGTAACAAACGGGAGTGTGATGGCACCAGCTTTCCTCAGGAGCAGTTCTTTCTGAAGTaGTTGCCTGACAGCAGTCCG +
Preference number: 5 (lower is better)
Translates to: GQGHGNKRECDGTSFPQEQFFLK*LPDSSP
Trigger: CGGACTGCTGTCAGGCAACAACTTCAGAAAGAACTG...CTCCTGAGGAAAGCTGGTGCCATCACACTCCCGTTTGTTACCGTGGCCCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CAA 90 bp CACATGTGCAGAACATATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGTGTTCTGACAACTGTTaGCTAAGGCCACACAGCCCG +
Preference number: 5 (lower is better)
Translates to: HMCRTYQSPLSSAWPGPRCSDNC*LRPHSP
Trigger: CGGGCTGTGTGGCCTTAGCAAACAGTTGTCAGAACA...CCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGATATGTTCTGCACATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CAA 90 bp TTGACTGCACAAGTGGCTGAAATTCAGTACTCCCCAATGAAGGTGCCACCGTTGGCCGCTGTCCAGTGCTaGGCCAGGGCCACGGTAACA +
Preference number: 5 (lower is better)
Translates to: LTAQVAEIQYSPMKVPPLAAVQC*ARATVT
Trigger: TGTTACCGTGGCCCTGGCCAAGCACTGGACAGCGGC...CAACGGTGGCACCTTCATTGGGGAGTACTGAATTTCAGCCACTTGTGCAGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS TCA 90 bp GTGGGTGCAGCTTCAGCAGACTTAAATGTTCCTGCCTGCTGTCTCTaGAGAGAGCAGTGGACCTCCCAGCACAGTGCTCGAGCTCTGCTA +
Preference number: 5 (lower is better)
Translates to: VGAASADLNVPACCL*REQWTSQHSARALL
Trigger: TAGCAGAGCTCGAGCACTGTGCTGGGAGGTCCACTGCTCTCTTCAGAGACAGCAGGCAGGAACATTTAAGTCTGCTGAAGCTGCACCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638799.1
CDS GCA 90 bp CTGGGCAGAGCCCACCACAGCTCAGCAAAGACGTTGTACCCAAACTaGCTCTCTAGATTCCTCCTCTCTGGGCAGGCCATCTCTGAAAGA +
Preference number: 5 (lower is better)
Translates to: LGRAHHSSAKTLYPN*LSRFLLSGQAISER
Trigger: TCTTTCAGAGATGGCCTGCCCAGAGAGGAGGAATCTAGAGAGGCAGTTTGGGTACAACGTCTTTGCTGAGCTGTGGTGGGCTCTGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638799.1
CDS-3UTR CAA 90 bp GGGACGGCAGGCCATAGAAATGAGGCGCATCCGTCACTTTCAGACACTGGAGCATTGCAGAGAATACTCTaGAGAGCGCGCTCCCTGATC +
Preference number: 5 (lower is better)
Translates to: GTAGHRNEAHPSLSDTGALQRIL*RARSLI
Trigger: GATCAGGGAGCGCGCTCTCAAGAGTATTCTCTGCAA...TGCTCCAGTGTCTGAAAGTGACGGATGCGCCTCATTTCTATGGCCTGCCGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR CAA 90 bp GGCCAGGGCCACGGTAACAAACGGGAGTGTGATGGCACCAGCTTTCCTCAGGAGTATAACAGAATGGCCTaGGCAGCAGTGTTCACCTCA +
Preference number: 5 (lower is better)
Translates to: GQGHGNKRECDGTSFPQEYNRMA*AAVFTS
Trigger: TGAGGTGAACACTGCTGCCAAGGCCATTCTGTTATA...CTCCTGAGGAAAGCTGGTGCCATCACACTCCCGTTTGTTACCGTGGCCCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CAA 90 bp GGCCAGGGCCACGGTAACAAACGGGAGTGTGATGGCACCAGCTTTCCTCAGGAGCAAAAGAGAAGACTGTaGCGAGAGCGAAACACGCAT +
Preference number: 5 (lower is better)
Translates to: GQGHGNKRECDGTSFPQEQKRRL*RERNTH
Trigger: ATGCGTGTTTCGCTCTCGCAACAGTCTTCTCTTTTG...CTCCTGAGGAAAGCTGGTGCCATCACACTCCCGTTTGTTACCGTGGCCCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CAA 90 bp ATATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGTAACAAACGGGAGTTGTTCTGACAACTGTTaGCTAAGGCCACACAGCCCG +
Preference number: 5 (lower is better)
Translates to: ISIAAVQCLARATVTNGSCSDNC*LRPHSP
Trigger: CGGGCTGTGTGGCCTTAGCAAACAGTTGTCAGAACA...ACTCCCGTTTGTTACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CAA 90 bp GGCCAGGGCCACGGTAACAAACGGGAGTGTGATGGCACCAGCTTTCCTCAGGAGCTTCAGGTAGAAGTGTaGTTGACTGCACAAGTGGCT +
Preference number: 5 (lower is better)
Translates to: GQGHGNKRECDGTSFPQELQVEV*LTAQVA
Trigger: AGCCACTTGTGCAGTCAACAACACTTCTACCTGAAG...CTCCTGAGGAAAGCTGGTGCCATCACACTCCCGTTTGTTACCGTGGCCCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CAA 90 bp ACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCCGCTGTCCAGTGCTaGGCCAGGGCCACGGTAACA +
Preference number: 5 (lower is better)
Translates to: TAGFNFSSPVDDCQLQGVAAVQC*ARATVT
Trigger: TGTTACCGTGGCCCTGGCCAAGCACTGGACAGCGGC...TACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp GCACATGTGCAGAACATATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGCCTGGAGATGCCCTTTaGCTTCTTCGGTCAAGAGAA +
Preference number: 5 (lower is better)
Translates to: AHVQNISIAAVQCLARATPGDAL*LLRSRE
Trigger: TTCTCTTGACCGAAGAAGCAAAAGGGCATCTCCAGG...CGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGATATGTTCTGCACATGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp AATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGTAACAAACGGGAGTGTGATCCTGGAGATGCCCTTTaGCTTCTTCGGTCAAGAGAA +
Preference number: 5 (lower is better)
Translates to: NRRCPVLGQGHGNKRECDPGDAL*LLRSRE
Trigger: TTCTCTTGACCGAAGAAGCAAAAGGGCATCTCCAGG...ATCACACTCCCGTTTGTTACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp AATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGTAACAAACGGGAGTGTGATCACAACTGGACGGTGTaGGAGTATCACCAGTTCTCT +
Preference number: 5 (lower is better)
Translates to: NRRCPVLGQGHGNKRECDHNWTV*EYHQFS
Trigger: AGAGAACTGGTGATACTCCAACACCGTCCAGTTGTG...ATCACACTCCCGTTTGTTACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CATCCTGGTGACAGCAGCCCTAACTTCCCTGTGGGTTGCAGCCTGAACAATGGATTGCAGAGAATACTCTaGAGAGCGCGCTCCCTGATC +
Preference number: 5 (lower is better)
Translates to: HPGDSSPNFPVGCSLNNGLQRIL*RARSLI
Trigger: GATCAGGGAGCGCGCTCTCAAGAGTATTCTCTGCAA...TCCATTGTTCAGGCTGCAACCCACAGGGAAGTTAGGGCTGCTGTCACCAGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR CAA 90 bp CCATCCCTCGTAAGGTCCGCTCAAGGGACGGCAGGCCATAGAAATGAGGCGCATCAAAAGAGAAGACTGTaGCGAGAGCGAAACACGCAT +
Preference number: 5 (lower is better)
Translates to: PSLVRSAQGTAGHRNEAHQKRRL*RERNTH
Trigger: ATGCGTGTTTCGCTCTCGCAACAGTCTTCTCTTTTG...ATGCGCCTCATTTCTATGGCCTGCCGTCCCTTGAGCGGACCTTACGAGGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CAA 90 bp GGCCAGGGCCACGGTAACAAACGGGAGTGTGATGGCACCAGCTTTCCTCAGGAGGGAGCCCTCCAAAACTaGAATGAGTCATCTAAACCA +
Preference number: 5 (lower is better)
Translates to: GQGHGNKRECDGTSFPQEGALQN*NESSKP
Trigger: TGGTTTAGATGACTCATTCAAGTTTTGGAGGGCTCC...CTCCTGAGGAAAGCTGGTGCCATCACACTCCCGTTTGTTACCGTGGCCCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CAA 90 bp GTAAGGTCCGCTCAAGGGACGGCAGGCCATAGAAATGAGGCGCATCCGTCACTTAGGTGGAGAGAGAACTaGGATCTCGATCCTGACTTG +
Preference number: 5 (lower is better)
Translates to: VRSAQGTAGHRNEAHPSLRWREN*DLDPDL
Trigger: CAAGTCAGGATCGAGATCCAAGTTCTCTCTCCACCT...AAGTGACGGATGCGCCTCATTTCTATGGCCTGCCGTCCCTTGAGCGGACCTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CAA 90 bp ATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGTAACAAACGGGAGTGTACAAAAACACACAGTTaGGGCAGGGGAGCAGAAAGA +
Preference number: 5 (lower is better)
Translates to: INRRCPVLGQGHGNKRECTKTHS*GRGAER
Trigger: TCTTTCTGCTCCCCTGCCCAAACTGTGTGTTTTTGT...ACACTCCCGTTTGTTACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CAA 90 bp TGGGAAAGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACAGCCGCTGTCCAGTGCTaGGCCAGGGCCACGGTAACA +
Preference number: 5 (lower is better)
Translates to: WERRGSTLCREVARLQVTAAVQC*ARATVT
Trigger: TGTTACCGTGGCCCTGGCCAAGCACTGGACAGCGGC...TGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCTTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp GGCCAGGGCCACGGTAACAAACGGGAGTGTGATGGCACCAGCTTTCCTCAGGAGTCATTAGCCAGGATCTaGGGTTTATTTGCAGGACTG +
Preference number: 5 (lower is better)
Translates to: GQGHGNKRECDGTSFPQESLARI*GLFAGL
Trigger: CAGTCCTGCAAATAAACCCAAGATCCTGGCTAATGA...CTCCTGAGGAAAGCTGGTGCCATCACACTCCCGTTTGTTACCGTGGCCCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CACATGTGCAGAACATATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGACTTTAGCTCCCCTGTaGATGACTGTCAGCTTCAAG +
Preference number: 5 (lower is better)
Translates to: HMCRTYQSPLSSAWPGPRTLAPL*MTVSFK
Trigger: CTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGT...CCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGATATGTTCTGCACATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp AGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTCCCTGCCTCCCAGGTaGAAGAGATTCTCGTGCCTC +
Preference number: 5 (lower is better)
Translates to: SCYTQLASTLAPLLMTVSSLPPR*KRFSCL
Trigger: GAGGCACGAGAATCTCTTCAACCTGGGAGGCAGGGA...GCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578780.2
ENST00000639487.1
ENST00000640769.2
CDS TCA 90 bp CTCTGGCCAGCAGGGAGAAAACTAGCCCCGGCAGAGACAGTCAGCTaGGAGAACACCATTCTAGGATGGCTGTCTATCCTAACACTGTCA +
Preference number: 5 (lower is better)
Translates to: LWPAGRKLAPAETVS*ENTILGWLSILTLS
Trigger: TGACAGTGTTAGGATAGACAGCCATCCTAGAATGGTGTTCTCTCAGCTGACTGTCTCTGCCGGGGCTAGTTTTCTCCCTGCTGGCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638799.1
ENST00000640525.1
CDS CCA 90 bp TGGGTGCTCCCACTTAGCTTCCCACCAACATGCTCTATAAGGAAGTaGTGGAAAGCACTGCCCCCGCTCTGCTCTCACATATGCAGAATC +
Preference number: 5 (lower is better)
Translates to: WVLPLSFPPTCSIRK*WKALPPLCSHICRI
Trigger: GATTCTGCATATGTGAGAGCAGAGCGGGGGCAGTGCTTTCCACCACTTCCTTATAGAGCATGTTGGTGGGAAGCTAAGTGGGAGCACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579021.1
CDS-3UTR CAA 90 bp CATGTGCAGAACATATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGTACAAAAGAGAAGACTGTaGCGAGAGCGAAACACGCAT +
Preference number: 5 (lower is better)
Translates to: HVQNISIAAVQCLARATVQKRRL*RERNTH
Trigger: ATGCGTGTTTCGCTCTCGCAACAGTCTTCTCTTTTG...TACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGATATGTTCTGCACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CAA 90 bp CACATGTGCAGAACATATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGCAGAGCCAGCTGCGTTaGAAAAACGTAAAGAAGTTC +
Preference number: 5 (lower is better)
Translates to: HMCRTYQSPLSSAWPGPRQSQLR*KNVKKF
Trigger: GAACTTCTTTACGTTTTTCAAACGCAGCTGGCTCTG...CCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGATATGTTCTGCACATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CAA 90 bp GGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGTGTTCTGACAACTGTTaGCTAAGGCCACACAGCCCG +
Preference number: 5 (lower is better)
Translates to: GELPQLDGVGVSPVLSLMCSDNC*LRPHSP
Trigger: CGGGCTGTGTGGCCTTAGCAAACAGTTGTCAGAACA...CATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS TCA 90 bp CAGTGTTCACCTGCTCAACAACACAGACCCGATAAACCAGTCAAATaGGATGTCCCGCTAGGTCACCTGACACACCTCACTTTCGGGCTC +
Preference number: 5 (lower is better)
Translates to: QCSPAQQHRPDKPVK*DVPLGHLTHLTFGL
Trigger: GAGCCCGAAAGTGAGGTGTGTCAGGTGACCTAGCGGGACATCTCATTTGACTGGTTTATCGGGTCTGTGTTGTTGAGCAGGTGAACACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638251.1
CDS GCA 90 bp ATGCACAGCTGCTGCAGGCAGGACACCGACTGTAATGCCAGGCGATaGTTTCCATCTCCAAAGGCCAGTTTCAACAGAGATAAAAGGCTC +
Preference number: 5 (lower is better)
Translates to: MHSCCRQDTDCNARR*FPSPKASFNRDKRL
Trigger: GAGCCTTTTATCTCTGTTGAAACTGGCCTTTGGAGATGGAAAGCATCGCCTGGCATTACAGTCGGTGTCCTGCCTGCAGCAGCTGTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000581583.1
ENST00000583043.5
ENST00000638251.1
ENST00000640376.1
ENST00000640654.1
ENST00000640736.1
ENST00000640769.2
CDS GCA 90 bp AGTTACTATTCCTTCTGGGTGCTCCCACTTAGCTTCCCACCAACATaGTCTATAAGGAAGTGGTGGAAAGCACTGCCCCCGCTCTGCTCT +
Preference number: 5 (lower is better)
Translates to: SYYSFWVLPLSFPPT*SIRKWWKALPPLCS
Trigger: AGAGCAGAGCGGGGGCAGTGCTTTCCACCACTTCCTTATAGAGCATGTTGGTGGGAAGCTAAGTGGGAGCACCCAGAAGGAATAGTAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579021.1
CDS CCA 90 bp GTGCTCCCACTTAGCTTCCCACCAACATGCTCTATAAGGAAGTGGTaGAAAGCACTGCCCCCGCTCTGCTCTCACATATGCAGAATCTCT +
Preference number: 5 (lower is better)
Translates to: VLPLSFPPTCSIRKW*KALPPLCSHICRIS
Trigger: AGAGATTCTGCATATGTGAGAGCAGAGCGGGGGCAGTGCTTTCCACCACTTCCTTATAGAGCATGTTGGTGGGAAGCTAAGTGGGAGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579021.1
CDS CCA 90 bp CTGTTTCCCTTCACAGTGCAAACGAAGGCACTGGGAAGTTCAAACTaGGCAGAGCCCACCACAGCTCAGCAAAGACGTTGTACCCAAACT +
Preference number: 5 (lower is better)
Translates to: LFPFTVQTKALGSSN*AEPTTAQQRRCTQT
Trigger: AGTTTGGGTACAACGTCTTTGCTGAGCTGTGGTGGGCTCTGCCCAGTTTGAACTTCCCAGTGCCTTCGTTTGCACTGTGAAGGGAAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638799.1
CDS-3UTR CAA 90 bp GTAAGGTCCGCTCAAGGGACGGCAGGCCATAGAAATGAGGCGCATCCGTCACTTGAGTGTGAGGCATGGTaGTACCAAACATTCTACAAC +
Preference number: 5 (lower is better)
Translates to: VRSAQGTAGHRNEAHPSLECEAW*YQTFYN
Trigger: GTTGTAGAATGTTTGGTACAACCATGCCTCACACTC...AAGTGACGGATGCGCCTCATTTCTATGGCCTGCCGTCCCTTGAGCGGACCTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CAA 90 bp ATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGTAACAAACGGGAGTGTCCAAGCCAATCCTTGTaGAGTAGGAATATGTTCTTC +
Preference number: 5 (lower is better)
Translates to: INRRCPVLGQGHGNKRECPSQSL*SRNMFF
Trigger: GAAGAACATATTCCTACTCAACAAGGATTGGCTTGG...ACACTCCCGTTTGTTACCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CAA 90 bp AAGGCCAGAGAGAGTGCAAGACAGGGACAAGGTGAGCTTCAAGAGCTGCTTCTTTGTTCTGACAACTGTTaGCTAAGGCCACACAGCCCG +
Preference number: 5 (lower is better)
Translates to: KARESARQGQGELQELLLCSDNC*LRPHSP
Trigger: CGGGCTGTGTGGCCTTAGCAAACAGTTGTCAGAACA...AAGAAGCAGCTCTTGAAGCTCACCTTGTCCCTGTCTTGCACTCTCTCTGGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CAA 90 bp AGAGAACAGAAAGGAATTGCAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGATGAAGGTGCCACCGTaGTTTCTGAGGTGGAGAGAG +
Preference number: 5 (lower is better)
Translates to: REQKGIASWQYTGQDTWQMKVPP*FLRWRE
Trigger: CTCTCTCCACCTCAGAAACAACGGTGGCACCTTCAT...CTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAATTCCTTTCTGTTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CAA 90 bp AAAGGAATTGCAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGACAAGCCTGGCAATCGTCAAGAGGTaGTCCAAGAGGCTGCACATT +
Preference number: 5 (lower is better)
Translates to: KGIASWQYTGQDTWQTSLAIVKR*SKRLHI
Trigger: AATGTGCAGCCTCTTGGACAACCTCTTGACGATTGC...CAGGCTTGTCTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAATTCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGACAAGCCTGCACATGTGCAGAGAACAGAAAGGAATaGCAAGCTGGCAGTATACAG +
Preference number: 5 (lower is better)
Translates to: QAGSIQGRTRGRQACTCAENRKE*QAGSIQ
Trigger: CTGTATACTGCCAGCTTGCAATTCCTTTCTGTTCTC...TGCACATGTGCAGGCTTGTCTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CCATCCCTCGTAAGGTCCGCTCAAGGGACGGCAGGCCATAGAAATGAGGCGCATAATAAAGGGCTGCTCTaGTGCTTGTATTTGCTCATC +
Preference number: 5 (lower is better)
Translates to: PSLVRSAQGTAGHRNEAHNKGLL*CLYLLI
Trigger: GATGAGCAAATACAAGCACAAGAGCAGCCCTTTATT...ATGCGCCTCATTTCTATGGCCTGCCGTCCCTTGAGCGGACCTTACGAGGGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CAA 90 bp GTAAGGTCCGCTCAAGGGACGGCAGGCCATAGAAATGAGGCGCATCCGTCACTTTCATTAGCCAGGATCTaGGGTTTATTTGCAGGACTG +
Preference number: 5 (lower is better)
Translates to: VRSAQGTAGHRNEAHPSLSLARI*GLFAGL
Trigger: CAGTCCTGCAAATAAACCCAAGATCCTGGCTAATGA...AAGTGACGGATGCGCCTCATTTCTATGGCCTGCCGTCCCTTGAGCGGACCTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CAA 90 bp TGCCTTCTGATAATTGTAAATCAGAGCCCAAAGGGCAGCTGCTCCAATCCTCTGTCCCTGCCTCCCAGGTaGAAGAGATTCTCGTGCCTC +
Preference number: 5 (lower is better)
Translates to: CLLIIVNQSPKGSCSNPLSLPPR*KRFSCL
Trigger: GAGGCACGAGAATCTCTTCAACCTGGGAGGCAGGGA...CAGAGGATTGGAGCAGCTGCCCTTTGGGCTCTGATTTACAATTATCAGAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639487.1
CDS GCA 90 bp GGAAGTCCAAAGGCCAGAGAAAGAGTAGAACACAAATCTCCACGTTaGCTGCCCTTTTCTCAGAGCAGGCTTTGGGCTGCAGTCGTACAA +
Preference number: 5 (lower is better)
Translates to: GSPKARERVEHKSPR*LPFSQSRLWAAVVQ
Trigger: TTGTACGACTGCAGCCCAAAGCCTGCTCTGAGAAAAGGGCAGGCAACGTGGAGATTTGTGTTCTACTCTTTCTCTGGCCTTTGGACTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638799.1
ENST00000640525.1
CDS-3UTR CAA 90 bp TGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCTTGCAGAGAATACTCTaGAGAGCGCGCTCCCTGATC +
Preference number: 5 (lower is better)
Translates to: CYTQLASTLAPLLMTVSFLQRIL*RARSLI
Trigger: GATCAGGGAGCGCGCTCTCAAGAGTATTCTCTGCAA...GAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000640769.2
CDS-3UTR CAA 90 bp GTAAGGTCCGCTCAAGGGACGGCAGGCCATAGAAATGAGGCGCATCCGTCACTTCTGATAAAAACTCGCTaGCCTTTTCAACAGGGAGAA +
Preference number: 5 (lower is better)
Translates to: VRSAQGTAGHRNEAHPSLLIKTR*PFQQGE
Trigger: TTCTCCCTGTTGAAAAGGCAAGCGAGTTTTTATCAG...AAGTGACGGATGCGCCTCATTTCTATGGCCTGCCGTCCCTTGAGCGGACCTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CAA 90 bp GTAAGGTCCGCTCAAGGGACGGCAGGCCATAGAAATGAGGCGCATCCGTCACTTCTTCTGTGTCAGAACTaGCTTTGCTTAGAAGGAGAA +
Preference number: 5 (lower is better)
Translates to: VRSAQGTAGHRNEAHPSLLLCQN*LCLEGE
Trigger: TTCTCCTTCTAAGCAAAGCAAGTTCTGACACAGAAG...AAGTGACGGATGCGCCTCATTTCTATGGCCTGCCGTCCCTTGAGCGGACCTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CAA 90 bp GAAAGGAATTGCAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGACAAGCCTCTATTAGAGGACGCTTaGTATCAGCCCCTTCTTCAC +
Preference number: 5 (lower is better)
Translates to: ERNCKLAVYRAGHVADKPLLEDA*YQPLLH
Trigger: GTGAAGAAGGGGCTGATACAAAGCGTCCTCTAATAG...AGGCTTGTCTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAATTCCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CAA 90 bp AGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGTTCTTTCTGAAGTTGTaGCCTGACAGCAGTCCGGAT +
Preference number: 5 (lower is better)
Translates to: RAATTGRCWSITSSLSHGFFLKL*PDSSPD
Trigger: ATCCGGACTGCTGTCAGGCAACAACTTCAGAAAGAA...CCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TACTCCCCAATGAAGGTGCCACCGTTGTTTCTGAGGTGGAGAGAGAACTTGGATTGTTCTGACAACTGTTaGCTAAGGCCACACAGCCCG +
Preference number: 5 (lower is better)
Translates to: YSPMKVPPLFLRWRENLDCSDNC*LRPHSP
Trigger: CGGGCTGTGTGGCCTTAGCAAACAGTTGTCAGAACA...ATCCAAGTTCTCTCTCCACCTCAGAAACAACGGTGGCACCTTCATTGGGGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGTGTTCTGACAACTGTTaGCTAAGGCCACACAGCCCG +
Preference number: 5 (lower is better)
Translates to: PQLDGVGVSPVLSLMGKKCSDNC*LRPHSP
Trigger: CGGGCTGTGTGGCCTTAGCAAACAGTTGTCAGAACA...CTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp ACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGAGGTGGAGAGAGAACTaGGATCTCGATCCTGACTTG +
Preference number: 5 (lower is better)
Translates to: TSSGNSCYTQLASTLAPLRWREN*DLDPDL
Trigger: CAAGTCAGGATCGAGATCCAAGTTCTCTCTCCACCT...CAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp AGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCAGGTGGAGAGAGAACTaGGATCTCGATCCTGACTTG +
Preference number: 5 (lower is better)
Translates to: SCYTQLASTLAPLLMTVSRWREN*DLDPDL
Trigger: CAAGTCAGGATCGAGATCCAAGTTCTCTCTCCACCT...GCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp GCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCAATGAAGGTGCCACCGTaGTTTCTGAGGTGGAGAGAG +
Preference number: 5 (lower is better)
Translates to: AGFNFSSPVDDCQLQGVAMKVPP*FLRWRE
Trigger: CTCTCTCCACCTCAGAAACAACGGTGGCACCTTCAT...TGCTACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGATGAAGGTGCCACCGTaGTTTCTGAGGTGGAGAGAG +
Preference number: 5 (lower is better)
Translates to: SGNSCYTQLASTLAPLLMMKVPP*FLRWRE
Trigger: CTCTCTCCACCTCAGAAACAACGGTGGCACCTTCAT...CATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp GGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGCTTCAGGTAGAAGTGTaGTTGACTGCACAAGTGGCT +
Preference number: 5 (lower is better)
Translates to: GELPQLDGVGVSPVLSLMLQVEV*LTAQVA
Trigger: AGCCACTTGTGCAGTCAACAACACTTCTACCTGAAG...CATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp GGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGACTTTCCTGGTGACCTaGAGCCACAAACTGGTCATG +
Preference number: 5 (lower is better)
Translates to: GTESCQLLLLLESCHNWTTFLVT*SHKLVM
Trigger: CATGACCAGTTTGTGGCTCAAGGTCACCAGGAAAGT...CGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp GCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAACCTGGAGATGCCCTTTaGCTTCTTCGGTCAAGAGAA +
Preference number: 5 (lower is better)
Translates to: AATTGRCWSITSSLSHGKPGDAL*LLRSRE
Trigger: TTCTCTTGACCGAAGAAGCAAAAGGGCATCTCCAGG...TTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp AGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGTCCTCTATGTGTAGCTaGAACAGGGTGTTGTCCACA +
Preference number: 5 (lower is better)
Translates to: RAATTGRCWSITSSLSHGSSMCS*NRVLST
Trigger: TGTGGACAACACCCTGTTCAAGCTACACATAGAGGA...CCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CACATGTGCAGAACATATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGCTCTTGTGCTTGTATTaGCTCATCTCTGTTAGTAAG +
Preference number: 5 (lower is better)
Translates to: HMCRTYQSPLSSAWPGPRLLCLY*LISVSK
Trigger: CTTACTAACAGAGATGAGCAAATACAAGCACAAGAG...CCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGATATGTTCTGCACATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp ACAGAAAGGAATTGCAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGACAAGCACAACTGGACGGTGTaGGAGTATCACCAGTTCTCT +
Preference number: 5 (lower is better)
Translates to: TERNCKLAVYRAGHVADKHNWTV*EYHQFS
Trigger: AGAGAACTGGTGATACTCCAACACCGTCCAGTTGTG...CTTGTCTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAATTCCTTTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp ACAAACGGGAGTGTGATGGCACCAGCTTTCCTCAGGAGCATGGCCAGAAGATTACACAACTGGACGGTGTaGGAGTATCACCAGTTCTCT +
Preference number: 5 (lower is better)
Translates to: TNGSVMAPAFLRSMARRLHNWTV*EYHQFS
Trigger: AGAGAACTGGTGATACTCCAACACCGTCCAGTTGTG...TAATCTTCTGGCCATGCTCCTGAGGAAAGCTGGTGCCATCACACTCCCGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CACATGTGCAGAACATATCAATCGCCGCTGTCCAGTGCTTGGCCAGGGCCACGGGGTTTGCTTCTGAGTTaGGGAAAGTTTTCTTTGCTA +
Preference number: 5 (lower is better)
Translates to: HMCRTYQSPLSSAWPGPRGLLLS*GKFSLL
Trigger: TAGCAAAGAAAACTTTCCCAAACTCAGAAGCAAACC...CCGTGGCCCTGGCCAAGCACTGGACAGCGGCGATTGATATGTTCTGCACATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CTGTTTAGTGCGGTGTGCCAAGCCAAGGACTTCAAGGTAACCCCACATGGACCACTCACTTTCGGGCTCTaGAATGCCAAATACAGAGAT +
Preference number: 5 (lower is better)
Translates to: LFSAVCQAKDFKVTPHGPLTFGL*NAKYRD
Trigger: ATCTCTGTATTTGGCATTCAAGAGCCCGAAAGTGAG...TGGTCCATGTGGGGTTACCTTGAAGTCCTTGGCTTGGCACACCGCACTAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CAA 90 bp TTCTGGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCTATTAGAGGACGCTTaGTATCAGCCCCTTCTTCAC +
Preference number: 5 (lower is better)
Translates to: FWRAATTGRCWSITSSLSLLEDA*YQPLLH
Trigger: GTGAAGAAGGGGCTGATACAAAGCGTCCTCTAATAG...AGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
CDS-3UTR CAA 90 bp AGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCCAAAAGAGAAGACTGTaGCGAGAGCGAAACACGCAT +
Preference number: 5 (lower is better)
Translates to: SCYTQLASTLAPLLMTVSQKRRL*RERNTH
Trigger: ATGCGTGTTTCGCTCTCGCAACAGTCTTCTCTTTTG...GCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
CDS-3UTR CAA 90 bp GGCCATAGAAATGAGGCGCATCCGTCACTTTCAGACACTGGAGCAGTTTCAGAGTTCTTTCTGAAGTTGTaGCCTGACAGCAGTCCGGAT +
Preference number: 5 (lower is better)
Translates to: GHRNEAHPSLSDTGAVSEFFLKL*PDSSPD
Trigger: ATCCGGACTGCTGTCAGGCAACAACTTCAGAAAGAA...CTCTGAAACTGCTCCAGTGTCTGAAAGTGACGGATGCGCCTCATTTCTATGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CAA 90 bp ACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTCTTTCTGAAGTTGTaGCCTGACAGCAGTCCGGAT +
Preference number: 5 (lower is better)
Translates to: TSSGNSCYTQLASTLAPLFFLKL*PDSSPD
Trigger: ATCCGGACTGCTGTCAGGCAACAACTTCAGAAAGAA...CAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGTTCTTTCTGAAGTTGTaGCCTGACAGCAGTCCGGAT +
Preference number: 5 (lower is better)
Translates to: LPQLDGVGVSPVLSLMGKFFLKL*PDSSPD
Trigger: ATCCGGACTGCTGTCAGGCAACAACTTCAGAAAGAA...CTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CCATCCCTCGTAAGGTCCGCTCAAGGGACGGCAGGCCATAGAAATGAGGCGCATGTAACTTCCATGAAATaGAGCAGCAAGGTATCAAAA +
Preference number: 5 (lower is better)
Translates to: PSLVRSAQGTAGHRNEAHVTSMK*SSKVSK
Trigger: TTTTGATACCTTGCTGCTCAATTTCATGGAAGTTAC...ATGCGCCTCATTTCTATGGCCTGCCGTCCCTTGAGCGGACCTTACGAGGGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CAA 90 bp AGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTATGTTCTGACAACTGTTaGCTAAGGCCACACAGCCCG +
Preference number: 5 (lower is better)
Translates to: RGSTSSGNSCYTQLASTLCSDNC*LRPHSP
Trigger: CGGGCTGTGTGGCCTTAGCAAACAGTTGTCAGAACA...TAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAAAGGTGGAGAGAGAACTaGGATCTCGATCCTGACTTG +
Preference number: 5 (lower is better)
Translates to: CREVARLQVTAATHSWLQRWREN*DLDPDL
Trigger: CAAGTCAGGATCGAGATCCAAGTTCTCTCTCCACCT...TTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TCTCTGGGAGCAATCGTCAAGAGGTTGTCCAAGAGGCTGCACATTGCTGAAAGAAGGTGGAGAGAGAACTaGGATCTCGATCCTGACTTG +
Preference number: 5 (lower is better)
Translates to: SLGAIVKRLSKRLHIAERRWREN*DLDPDL
Trigger: CAAGTCAGGATCGAGATCCAAGTTCTCTCTCCACCT...TCTTTCAGCAATGTGCAGCCTCTTGGACAACCTCTTGACGATTGCTCCCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CAA 90 bp AGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAATGAAGGTGCCACCGTaGTTTCTGAGGTGGAGAGAG +
Preference number: 5 (lower is better)
Translates to: RGSTSSGNSCYTQLASTLMKVPP*FLRWRE
Trigger: CTCTCTCCACCTCAGAAACAACGGTGGCACCTTCAT...TAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp GCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAACAGGTAGAAGTGTTGTaGACTGCACAAGTGGCTGAA +
Preference number: 5 (lower is better)
Translates to: AATTGRCWSITSSLSHGKQVEVL*TAQVAE
Trigger: TTCAGCCACTTGTGCAGTCAACAACACTTCTACCTG...TTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp AGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCCAGGTAGAAGTGTTGTaGACTGCACAAGTGGCTGAA +
Preference number: 5 (lower is better)
Translates to: SCYTQLASTLAPLLMTVSQVEVL*TAQVAE
Trigger: TTCAGCCACTTGTGCAGTCAACAACACTTCTACCTG...GCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp AGTATACAGGGCAGGACACGTGGCAGACAAGCCTGCACATGTGCAGAACATATCCAGGTAGAAGTGTTGTaGACTGCACAAGTGGCTGAA +
Preference number: 5 (lower is better)
Translates to: SIQGRTRGRQACTCAEHIQVEVL*TAQVAE
Trigger: TTCAGCCACTTGTGCAGTCAACAACACTTCTACCTG...GATATGTTCTGCACATGTGCAGGCTTGTCTGCCACGTGTCCTGCCCTGTATACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CAA 90 bp GGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGCTTCAGGTAGAAGTGTaGTTGACTGCACAAGTGGCT +
Preference number: 5 (lower is better)
Translates to: GTESCQLLLLLESCHNWTLQVEV*LTAQVA
Trigger: AGCCACTTGTGCAGTCAACAACACTTCTACCTGAAG...CGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGGACTTTCCTGGTGACCTaGAGCCACAAACTGGTCATG +
Preference number: 5 (lower is better)
Translates to: HNWTVLEYHQFSLSWERRTFLVT*SHKLVM
Trigger: CATGACCAGTTTGTGGCTCAAGGTCACCAGGAAAGT...CCTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGTACTTTCCTGGTGACCTaGAGCCACAAACTGGTCATG +
Preference number: 5 (lower is better)
Translates to: HRKLSAAITSGELPQLDGTFLVT*SHKLVM
Trigger: CATGACCAGTTTGTGGCTCAAGGTCACCAGGAAAGT...ACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp AGAGAACAGAAAGGAATTGCAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGACAAAAACACACAGTTaGGGCAGGGGAGCAGAAAGA +
Preference number: 5 (lower is better)
Translates to: REQKGIASWQYTGQDTWQTKTHS*GRGAER
Trigger: TCTTTCTGCTCCCCTGCCCAAACTGTGTGTTTTTGT...CTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAATTCCTTTCTGTTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CAA 90 bp GGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCATCCGCAATCGTCAAGAGGTaGTCCAAGAGGCTGCACATT +
Preference number: 5 (lower is better)
Translates to: GFNFSSPVDDCQLQGVASAIVKR*SKRLHI
Trigger: AATGTGCAGCCTCTTGGACAACCTCTTGACGATTGC...GGATGCTACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CATCCTGAATCACAAGGTCAGGCTCCACCAATAAACATGACTGCAGAAGCCTGGGCAATCGTCAAGAGGTaGTCCAAGAGGCTGCACATT +
Preference number: 5 (lower is better)
Translates to: HPESQGQAPPINMTAEAWAIVKR*SKRLHI
Trigger: AATGTGCAGCCTCTTGGACAACCTCTTGACGATTGC...CCAGGCTTCTGCAGTCATGTTTATTGGTGGAGCCTGACCTTGTGATTCAGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CAA 90 bp CACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGTGCAATCGTCAAGAGGTaGTCCAAGAGGCTGCACATT +
Preference number: 5 (lower is better)
Translates to: HRKLSAAITSGELPQLDGAIVKR*SKRLHI
Trigger: AATGTGCAGCCTCTTGGACAACCTCTTGACGATTGC...ACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp GCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCAGCAATCGTCAAGAGGTaGTCCAAGAGGCTGCACATT +
Preference number: 5 (lower is better)
Translates to: AGFNFSSPVDDCQLQGVAAIVKR*SKRLHI
Trigger: AATGTGCAGCCTCTTGGACAACCTCTTGACGATTGC...TGCTACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp GGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGAGAACAGAAAGGAATaGCAAGCTGGCAGTATACAG +
Preference number: 5 (lower is better)
Translates to: GELPQLDGVGVSPVLSLMENRKE*QAGSIQ
Trigger: CTGTATACTGCCAGCTTGCAATTCCTTTCTGTTCTC...CATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp AGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGGAAGTGAAGCCACTGTaGGACTACAGCATAAATGTG +
Preference number: 5 (lower is better)
Translates to: RAATTGRCWSITSSLSHGEVKPL*DYSINV
Trigger: CACATTTATGCTGTAGTCCAACAGTGGCTTCACTTC...CCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp AGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAGCCTCAGAATCATTaGTTGCCCATCTTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: RAATTGRCWSITSSLSHGKPQNH*LPIFSR
Trigger: TCTGGAGAAGATGGGCAACAAATGATTCTGAGGCTT...CCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp GGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGAAGCCTCAGAATCATTaGTTGCCCATCTTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: GELPQLDGVGVSPVLSLMKPQNH*LPIFSR
Trigger: TCTGGAGAAGATGGGCAACAAATGATTCTGAGGCTT...CATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CAGTATACAGGGCAGGACACGTGGCAGACAAGCCTGCACATGTGCAGAACATATACTTTAGCTCCCCTGTaGATGACTGTCAGCTTCAAG +
Preference number: 5 (lower is better)
Translates to: QYTGQDTWQTSLHMCRTYTLAPL*MTVSFK
Trigger: CTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGT...ATATGTTCTGCACATGTGCAGGCTTGTCTGCCACGTGTCCTGCCCTGTATACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp ACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGACTTTAGCTCCCCTGTaGATGACTGTCAGCTTCAAG +
Preference number: 5 (lower is better)
Translates to: TSSGNSCYTQLASTLAPLTLAPL*MTVSFK
Trigger: CTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGT...CAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TTCTGGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTACTTTAGCTCCCCTGTaGATGACTGTCAGCTTCAAG +
Preference number: 5 (lower is better)
Translates to: FWRAATTGRCWSITSSLSTLAPL*MTVSFK
Trigger: CTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGT...AGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGCACAACTGGACGGTGTaGGAGTATCACCAGTTCTCT +
Preference number: 5 (lower is better)
Translates to: SGNSCYTQLASTLAPLLMHNWTV*EYHQFS
Trigger: AGAGAACTGGTGATACTCCAACACCGTCCAGTTGTG...CATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGGCACAACTGGACGGTGTaGGAGTATCACCAGTTCTCT +
Preference number: 5 (lower is better)
Translates to: HNWTVLEYHQFSLSWERRHNWTV*EYHQFS
Trigger: AGAGAACTGGTGATACTCCAACACCGTCCAGTTGTG...CCTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TGGGAAAGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACATTGCAGAGAATACTCTaGAGAGCGCGCTCCCTGATC +
Preference number: 5 (lower is better)
Translates to: WERRGSTLCREVARLQVTLQRIL*RARSLI
Trigger: GATCAGGGAGCGCGCTCTCAAGAGTATTCTCTGCAA...TGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCTTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000640769.2
CDS-3UTR CAA 90 bp GGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCATCCAACGTCAACCAAATGTaGGACTGCTGGGGGATACTT +
Preference number: 5 (lower is better)
Translates to: GFNFSSPVDDCQLQGVASNVNQM*DCWGIL
Trigger: AAGTATCCCCCAGCAGTCCAACATTTGGTTGACGTT...GGATGCTACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000640769.2
CDS-3UTR CAA 90 bp CACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGTAACGTCAACCAAATGTaGGACTGCTGGGGGATACTT +
Preference number: 5 (lower is better)
Translates to: HRKLSAAITSGELPQLDGNVNQM*DCWGIL
Trigger: AAGTATCCCCCAGCAGTCCAACATTTGGTTGACGTT...ACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255674.11
ENST00000640769.2
CDS-3UTR CAA 90 bp GGCCATAGAAATGAGGCGCATCCGTCACTTTCAGACACTGGAGCAGTTTCAGAGCTCACTTTCGGGCTCTaGAATGCCAAATACAGAGAT +
Preference number: 5 (lower is better)
Translates to: GHRNEAHPSLSDTGAVSELTFGL*NAKYRD
Trigger: ATCTCTGTATTTGGCATTCAAGAGCCCGAAAGTGAG...CTCTGAAACTGCTCCAGTGTCTGAAAGTGACGGATGCGCCTCATTTCTATGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CAA 90 bp GCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGCTCACTTTCGGGCTCTaGAATGCCAAATACAGAGAT +
Preference number: 5 (lower is better)
Translates to: AQKVVSCYYFWRAATTGRLTFGL*NAKYRD
Trigger: ATCTCTGTATTTGGCATTCAAGAGCCCGAAAGTGAG...CCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CAA 90 bp TGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAATATAACAGAATGGCCTaGGCAGCAGTGTTCACCTCA +
Preference number: 5 (lower is better)
Translates to: CREVARLQVTAATHSWLQYNRMA*AAVFTS
Trigger: TGAGGTGAACACTGCTGCCAAGGCCATTCTGTTATA...TTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CAA 90 bp TCTGTTTCTTCTCGTGCCTGTGACTCTGTCAGAACCAAGAGGTCTAACAGTGGGTATAACAGAATGGCCTaGGCAGCAGTGTTCACCTCA +
Preference number: 5 (lower is better)
Translates to: SVSSRACDSVRTKRSNSGYNRMA*AAVFTS
Trigger: TGAGGTGAACACTGCTGCCAAGGCCATTCTGTTATA...CCCACTGTTAGACCTCTTGGTTCTGACAGAGTCACAGGCACGAGAAGAAACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CAA 90 bp CATCCTGAATCACAAGGTCAGGCTCCACCAATAAACATGACTGCAGAAGCCTGGCTATTAGAGGACGCTTaGTATCAGCCCCTTCTTCAC +
Preference number: 5 (lower is better)
Translates to: HPESQGQAPPINMTAEAWLLEDA*YQPLLH
Trigger: GTGAAGAAGGGGCTGATACAAAGCGTCCTCTAATAG...CCAGGCTTCTGCAGTCATGTTTATTGGTGGAGCCTGACCTTGTGATTCAGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CAA 90 bp TCTTCTCGTGCCTGTGACTCTGTCAGAACCAAGAGGTCTAACAGTGGGTTTGCACTATTAGAGGACGCTTaGTATCAGCCCCTTCTTCAC +
Preference number: 5 (lower is better)
Translates to: SSRACDSVRTKRSNSGFALLEDA*YQPLLH
Trigger: GTGAAGAAGGGGCTGATACAAAGCGTCCTCTAATAG...TGCAAACCCACTGTTAGACCTCTTGGTTCTGACAGAGTCACAGGCACGAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CAA 90 bp GGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCATCCCTATTAGAGGACGCTTaGTATCAGCCCCTTCTTCAC +
Preference number: 5 (lower is better)
Translates to: GFNFSSPVDDCQLQGVASLLEDA*YQPLLH
Trigger: GTGAAGAAGGGGCTGATACAAAGCGTCCTCTAATAG...GGATGCTACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
CDS-3UTR CAA 90 bp CACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGGCAAAAGAGAAGACTGTaGCGAGAGCGAAACACGCAT +
Preference number: 5 (lower is better)
Translates to: HNWTVLEYHQFSLSWERRQKRRL*RERNTH
Trigger: ATGCGTGTTTCGCTCTCGCAACAGTCTTCTCTTTTG...CCTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
CDS-3UTR CAA 90 bp AGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTCAGTTCTTTCTGAAGTaGTTGCCTGACAGCAGTCCG +
Preference number: 5 (lower is better)
Translates to: RRGSTLCREVARLQVTAAQFFLK*LPDSSP
Trigger: CGGACTGCTGTCAGGCAACAACTTCAGAAAGAACTG...AGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp AGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCCAGAGCCAGCTGCGTTaGAAAAACGTAAAGAAGTTC +
Preference number: 5 (lower is better)
Translates to: SCYTQLASTLAPLLMTVSQSQLR*KNVKKF
Trigger: GAACTTCTTTACGTTTTTCAAACGCAGCTGGCTCTG...GCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp GAAAGGAATTGCAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGACAAGCCTCAACCAAGCCAATCCTaGTTGAGTAGGAATATGTTC +
Preference number: 5 (lower is better)
Translates to: ERNCKLAVYRAGHVADKPQPSQS*LSRNMF
Trigger: GAACATATTCCTACTCAACAAGGATTGGCTTGGTTG...AGGCTTGTCTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAATTCCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CAA 90 bp AGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCGGAGCCCTCCAAAACTaGAATGAGTCATCTAAACCA +
Preference number: 5 (lower is better)
Translates to: SCYTQLASTLAPLLMTVSGALQN*NESSKP
Trigger: TGGTTTAGATGACTCATTCAAGTTTTGGAGGGCTCC...GCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp ACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAAGGTGGAGAGAGAACTaGGATCTCGATCCTGACTTG +
Preference number: 5 (lower is better)
Translates to: TAGFNFSSPVDDCQLQGVRWREN*DLDPDL
Trigger: CAAGTCAGGATCGAGATCCAAGTTCTCTCTCCACCT...TACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp AGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAAGGTGGAGAGAGAACTaGGATCTCGATCCTGACTTG +
Preference number: 5 (lower is better)
Translates to: RGSTSSGNSCYTQLASTLRWREN*DLDPDL
Trigger: CAAGTCAGGATCGAGATCCAAGTTCTCTCTCCACCT...TAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp AGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTAGGTGGAGAGAGAACTaGGATCTCGATCCTGACTTG +
Preference number: 5 (lower is better)
Translates to: RRGSTLCREVARLQVTAARWREN*DLDPDL
Trigger: CAAGTCAGGATCGAGATCCAAGTTCTCTCTCCACCT...AGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp ACTAGCAAAAGTCGCAGCATGGACTTTAATCGGGTAGTACACGGAAGCATCTCTATGAAGGTGCCACCGTaGTTTCTGAGGTGGAGAGAG +
Preference number: 5 (lower is better)
Translates to: TSKSRSMDFNRVVHGSISMKVPP*FLRWRE
Trigger: CTCTCTCCACCTCAGAAACAACGGTGGCACCTTCAT...AGAGATGCTTCCGTGTACTACCCGATTAAAGTCCATGCTGCGACTTTTGCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR CAA 90 bp AAATGTTCTGACAACTGTTTGCTAAGGCCACACAGCCCGTTTCAAGGGTGGTCAACTTTCCTGGTGACCTaGAGCCACAAACTGGTCATG +
Preference number: 5 (lower is better)
Translates to: KCSDNCLLRPHSPFQGWSTFLVT*SHKLVM
Trigger: CATGACCAGTTTGTGGCTCAAGGTCACCAGGAAAGT...TGACCACCCTTGAAACGGGCTGTGTGGCCTTAGCAAACAGTTGTCAGAACATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CAA 90 bp CACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGGACAAAAACACACAGTTaGGGCAGGGGAGCAGAAAGA +
Preference number: 5 (lower is better)
Translates to: HNWTVLEYHQFSLSWERRTKTHS*GRGAER
Trigger: TCTTTCTGCTCCCCTGCCCAAACTGTGTGTTTTTGT...CCTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp GCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCAACAAAAACACACAGTTaGGGCAGGGGAGCAGAAAGA +
Preference number: 5 (lower is better)
Translates to: AGFNFSSPVDDCQLQGVATKTHS*GRGAER
Trigger: TCTTTCTGCTCCCCTGCCCAAACTGTGTGTTTTTGT...TGCTACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCACAAAAACACACAGTTaGGGCAGGGGAGCAGAAAGA +
Preference number: 5 (lower is better)
Translates to: CYTQLASTLAPLLMTVSFTKTHS*GRGAER
Trigger: TCTTTCTGCTCCCCTGCCCAAACTGTGTGTTTTTGT...GAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp AGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCGAGAACAGAAAGGAATaGCAAGCTGGCAGTATACAG +
Preference number: 5 (lower is better)
Translates to: SCYTQLASTLAPLLMTVSENRKE*QAGSIQ
Trigger: CTGTATACTGCCAGCTTGCAATTCCTTTCTGTTCTC...GCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp AAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACCTGGAGATGCCCTTTaGCTTCTTCGGTCAAGAGAA +
Preference number: 5 (lower is better)
Translates to: KAQKVVSCYYFWRAATTGPGDAL*LLRSRE
Trigger: TTCTCTTGACCGAAGAAGCAAAAGGGCATCTCCAGG...TCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAACCTGGAGATGCCCTTTaGCTTCTTCGGTCAAGAGAA +
Preference number: 5 (lower is better)
Translates to: LHTAGFNFSSPVDDCQLQPGDAL*LLRSRE
Trigger: TTCTCTTGACCGAAGAAGCAAAAGGGCATCTCCAGG...TTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp GGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGCAGCATAAATGTGTTTaGCTCTTAGCCTGGAGATGC +
Preference number: 5 (lower is better)
Translates to: GTESCQLLLLLESCHNWTQHKCV*LLAWRC
Trigger: GCATCTCCAGGCTAAGAGCAAAACACATTTATGCTG...CGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCTCCTCTATGTGTAGCTaGAACAGGGTGTTGTCCACA +
Preference number: 5 (lower is better)
Translates to: CYTQLASTLAPLLMTVSFSSMCS*NRVLST
Trigger: TGTGGACAACACCCTGTTCAAGCTACACATAGAGGA...GAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CAAGGTGTAGCATCCCATGGCACTCAGGAAGAATTAAGGAGCTGCACGAGGTTTTCCTCTATGTGTAGCTaGAACAGGGTGTTGTCCACA +
Preference number: 5 (lower is better)
Translates to: QGVASHGTQEELRSCTRFSSMCS*NRVLST
Trigger: TGTGGACAACACCCTGTTCAAGCTACACATAGAGGA...AAACCTCGTGCAGCTCCTTAATTCTTCCTGAGTGCCATGGGATGCTACACCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TTGGAATCTATGTCAGAGACCTTGGACAAGTCACTCATCTCTCTGGGCCTCAGGTCCTCTATGTGTAGCTaGAACAGGGTGTTGTCCACA +
Preference number: 5 (lower is better)
Translates to: LESMSETLDKSLISLGLRSSMCS*NRVLST
Trigger: TGTGGACAACACCCTGTTCAAGCTACACATAGAGGA...CCTGAGGCCCAGAGAGATGAGTGACTTGTCCAAGGTCTCTGACATAGATTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679113.1
CDS-3UTR CAA 90 bp AAGGCCAGAGAGAGTGCAAGACAGGGACAAGGTGAGCTTCAAGAGCTGCTTCTTAAGCCTCAGAATCATTaGTTGCCCATCTTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: KARESARQGQGELQELLLKPQNH*LPIFSR
Trigger: TCTGGAGAAGATGGGCAACAAATGATTCTGAGGCTT...AAGAAGCAGCTCTTGAAGCTCACCTTGTCCCTGTCTTGCACTCTCTCTGGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGCCTCAGAATCATTaGTTGCCCATCTTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: LPQLDGVGVSPVLSLMGKKPQNH*LPIFSR
Trigger: TCTGGAGAAGATGGGCAACAAATGATTCTGAGGCTT...CTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp ACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTCATTAGCCAGGATCTaGGGTTTATTTGCAGGACTG +
Preference number: 5 (lower is better)
Translates to: TSSGNSCYTQLASTLAPLSLARI*GLFAGL
Trigger: CAGTCCTGCAAATAAACCCAAGATCCTGGCTAATGA...CAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TTCTGGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTTCATTAGCCAGGATCTaGGGTTTATTTGCAGGACTG +
Preference number: 5 (lower is better)
Translates to: FWRAATTGRCWSITSSLSSLARI*GLFAGL
Trigger: CAGTCCTGCAAATAAACCCAAGATCCTGGCTAATGA...AGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGACTTTAGCTCCCCTGTaGATGACTGTCAGCTTCAAG +
Preference number: 5 (lower is better)
Translates to: PQLDGVGVSPVLSLMGKKTLAPL*MTVSFK
Trigger: CTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGT...CTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp AGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTACACAACTGGACGGTGTaGGAGTATCACCAGTTCTCT +
Preference number: 5 (lower is better)
Translates to: RGSTSSGNSCYTQLASTLHNWTV*EYHQFS
Trigger: AGAGAACTGGTGATACTCCAACACCGTCCAGTTGTG...TAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp ACTCTGGCGTCTATTAGAGGACGCTTTGTATCAGCCCCTTCTTCACTGGTAAGACACAACTGGACGGTGTaGGAGTATCACCAGTTCTCT +
Preference number: 5 (lower is better)
Translates to: TLASIRGRFVSAPSSLVRHNWTV*EYHQFS
Trigger: AGAGAACTGGTGATACTCCAACACCGTCCAGTTGTG...TCTTACCAGTGAAGAAGGGGCTGATACAAAGCGTCCTCTAATAGACGCCAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581161.5
CDS-3UTR CAA 90 bp CACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGTTGGGCTGAGCTAAATTaGAACCCAGGCTTATACAGC +
Preference number: 5 (lower is better)
Translates to: HRKLSAAITSGELPQLDGWAELN*NPGLYS
Trigger: GCTGTATAAGCCTGGGTTCAAATTTAGCTCAGCCCA...ACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578780.2
ENST00000639487.1
ENST00000640769.2
CDS-3UTR CAA 90 bp AATGCACACTTACTTCTACATAGCCCTTTTCCAGTGTGGATGCTCTGGATAACATCCCTGCCTCCCAGGTaGAAGAGATTCTCGTGCCTC +
Preference number: 5 (lower is better)
Translates to: NAHLLLHSPFPVWMLWITSLPPR*KRFSCL
Trigger: GAGGCACGAGAATCTCTTCAACCTGGGAGGCAGGGA...TGTTATCCAGAGCATCCACACTGGAAAAGGGCTATGTAGAAGTAAGTGTGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578780.2
ENST00000639487.1
ENST00000640769.2
CDS TCA 90 bp GTGACCGTTGTTTCTGAGGTGGAGAGAGAACTTGGATCTCGATCCTaGCTTGTCCTAGATGGAGCCCTCCAAAACTTGAATGAGTCATCT +
Preference number: 5 (lower is better)
Translates to: VTVVSEVERELGSRS*LVLDGALQNLNESS
Trigger: AGATGACTCATTCAAGTTTTGGAGGGCTCCATCTAGGACAAGTCAGGATCGAGATCCAAGTTCTCTCTCCACCTCAGAAACAACGGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579986.6
CDS GCA 90 bp ACAGCTGATTCCAGAATGGAGACACAAAACTGGGGAAGACTGAGCTaGTGGAATTGTAGTTCCAATGTGTCTTCAGTTTCCAGCTCTGGC +
Preference number: 5 (lower is better)
Translates to: TADSRMETQNWGRLS*WNCSSNVSSVSSSG
Trigger: GCCAGAGCTGGAAACTGAAGACACATTGGAACTACAATTCCAGCAGCTCAGTCTTCCCCAGTTTTGTGTCTCCATTCTGGAATCAGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000581583.1
ENST00000583043.5
ENST00000638251.1
ENST00000640376.1
ENST00000640769.2
CDS GCA 90 bp CAAATCTCCACGTTGCCTGCCCTTTTCTCAGAGCAGGCTTTGGGCTaGAGTCGTACAAGAACTGAGCTAGATAAAGGGGAATTGTACAAT +
Preference number: 5 (lower is better)
Translates to: QISTLPALFSEQALG*SRTRTELDKGELYN
Trigger: ATTGTACAATTCCCCTTTATCTAGCTCAGTTCTTGTACGACTGCAGCCCAAAGCCTGCTCTGAGAAAAGGGCAGGCAACGTGGAGATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638799.1
ENST00000640525.1
CDS CCA 90 bp GCTGATTCCAGAATGGAGACACAAAACTGGGGAAGACTGAGCTGCTaGAATTGTAGTTCCAATGTGTCTTCAGTTTCCAGCTCTGGCAGA +
Preference number: 5 (lower is better)
Translates to: ADSRMETQNWGRLSC*NCSSNVSSVSSSGR
Trigger: TCTGCCAGAGCTGGAAACTGAAGACACATTGGAACTACAATTCCAGCAGCTCAGTCTTCCCCAGTTTTGTGTCTCCATTCTGGAATCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000581583.1
ENST00000583043.5
ENST00000638251.1
ENST00000640376.1
ENST00000640769.2
CDS-3UTR CAA 90 bp AAAGGAATTGCAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGACAAGCCTGCTCAGCAGGAAAATCTaGCATGATAACATCCTTCAA +
Preference number: 5 (lower is better)
Translates to: KGIASWQYTGQDTWQTSLLSRKI*HDNILQ
Trigger: TTGAAGGATGTTATCATGCAAGATTTTCCTGCTGAG...CAGGCTTGTCTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAATTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581161.5
CDS-3UTR CAA 90 bp CTGTTTAGTGCGGTGTGCCAAGCCAAGGACTTCAAGGTAACCCCACATGGACCACTCAGCAGGAAAATCTaGCATGATAACATCCTTCAA +
Preference number: 5 (lower is better)
Translates to: LFSAVCQAKDFKVTPHGPLSRKI*HDNILQ
Trigger: TTGAAGGATGTTATCATGCAAGATTTTCCTGCTGAG...TGGTCCATGTGGGGTTACCTTGAAGTCCTTGGCTTGGCACACCGCACTAAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR CAA 90 bp GTGCCTGTGACTCTGTCAGAACCAAGAGGTCTAACAGTGGGTTTGCACTATGTCTACAGGTGCATTCAATaGAATAAACGGCCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: VPVTLSEPRGLTVGLHYVYRCIQ*NKRPLQ
Trigger: CTGCAGAGGCCGTTTATTCAATTGAATGCACCTGTA...GACATAGTGCAAACCCACTGTTAGACCTCTTGGTTCTGACAGAGTCACAGGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CAA 90 bp CCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGTACAGGTGCATTCAATaGAATAAACGGCCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: PQLDGVGVSPVLSLMGKKYRCIQ*NKRPLQ
Trigger: CTGCAGAGGCCGTTTATTCAATTGAATGCACCTGTA...CTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CAA 90 bp CCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGCTCACTTTCGGGCTCTaGAATGCCAAATACAGAGAT +
Preference number: 5 (lower is better)
Translates to: PQLDGVGVSPVLSLMGKKLTFGL*NAKYRD
Trigger: ATCTCTGTATTTGGCATTCAAGAGCCCGAAAGTGAG...CTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CAA 90 bp TCTGTTTCTTCTCGTGCCTGTGACTCTGTCAGAACCAAGAGGTCTAACAGTGGGCTCACTTTCGGGCTCTaGAATGCCAAATACAGAGAT +
Preference number: 5 (lower is better)
Translates to: SVSSRACDSVRTKRSNSGLTFGL*NAKYRD
Trigger: ATCTCTGTATTTGGCATTCAAGAGCCCGAAAGTGAG...CCCACTGTTAGACCTCTTGGTTCTGACAGAGTCACAGGCACGAGAAGAAACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CAA 90 bp AGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAGAGATTCAATAAACTaGTTCCAGGTCAATGCTGTC +
Preference number: 5 (lower is better)
Translates to: RAATTGRCWSITSSLSHGRDSIN*FQVNAV
Trigger: GACAGCATTGACCTGGAACAAGTTTATTGAATCTCT...CCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CAA 90 bp ACAGAAAGGAATTGCAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGACAAGCTTCTGTGTCAGAACTaGCTTTGCTTAGAAGGAGAA +
Preference number: 5 (lower is better)
Translates to: TERNCKLAVYRAGHVADKLLCQN*LCLEGE
Trigger: TTCTCCTTCTAAGCAAAGCAAGTTCTGACACAGAAG...CTTGTCTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAATTCCTTTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CAA 90 bp AGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTTCTGTGTCAGAACTaGCTTTGCTTAGAAGGAGAA +
Preference number: 5 (lower is better)
Translates to: STSSGNSCYTQLASTLAPLLCQN*LCLEGE
Trigger: TTCTCCTTCTAAGCAAAGCAAGTTCTGACACAGAAG...GGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
CDS-3UTR CAA 90 bp ACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTACAAAAGAGAAGACTGTaGCGAGAGCGAAACACGCAT +
Preference number: 5 (lower is better)
Translates to: TAGFNFSSPVDDCQLQGVQKRRL*RERNTH
Trigger: ATGCGTGTTTCGCTCTCGCAACAGTCTTCTCTTTTG...TACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
CDS-3UTR CAA 90 bp CTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAATTCTTTCTGAAGTTGTaGCCTGACAGCAGTCCGGAT +
Preference number: 5 (lower is better)
Translates to: LHTAGFNFSSPVDDCQLQFFLKL*PDSSPD
Trigger: ATCCGGACTGCTGTCAGGCAACAACTTCAGAAAGAA...TTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp AAGGACTTCAAGGTAACCCCACATGGACCAGGGCAACCCTTTAAAGACAATCTGTTCTTTCTGAAGTTGTaGCCTGACAGCAGTCCGGAT +
Preference number: 5 (lower is better)
Translates to: KDFKVTPHGPGQPFKDNLFFLKL*PDSSPD
Trigger: ATCCGGACTGCTGTCAGGCAACAACTTCAGAAAGAA...CAGATTGTCTTTAAAGGGTTGCCCTGGTCCATGTGGGGTTACCTTGAAGTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CAA 90 bp TGGGAAAGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACACAGTTCTTTCTGAAGTaGTTGCCTGACAGCAGTCCG +
Preference number: 5 (lower is better)
Translates to: WERRGSTLCREVARLQVTQFFLK*LPDSSP
Trigger: CGGACTGCTGTCAGGCAACAACTTCAGAAAGAACTG...TGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCTTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCCAGAGCCAGCTGCGTTaGAAAAACGTAAAGAAGTTC +
Preference number: 5 (lower is better)
Translates to: CYTQLASTLAPLLMTVSFQSQLR*KNVKKF
Trigger: GAACTTCTTTACGTTTTTCAAACGCAGCTGGCTCTG...GAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp GCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCACAGAGCCAGCTGCGTTaGAAAAACGTAAAGAAGTTC +
Preference number: 5 (lower is better)
Translates to: AGFNFSSPVDDCQLQGVAQSQLR*KNVKKF
Trigger: GAACTTCTTTACGTTTTTCAAACGCAGCTGGCTCTG...TGCTACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp ACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGCCAAGCCAATCCTTGTaGAGTAGGAATATGTTCTTC +
Preference number: 5 (lower is better)
Translates to: TSSGNSCYTQLASTLAPLPSQSL*SRNMFF
Trigger: GAAGAACATATTCCTACTCAACAAGGATTGGCTTGG...CAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp ACAGAAAGGAATTGCAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGACAAGCCAAGCCAATCCTTGTaGAGTAGGAATATGTTCTTC +
Preference number: 5 (lower is better)
Translates to: TERNCKLAVYRAGHVADKPSQSL*SRNMFF
Trigger: GAAGAACATATTCCTACTCAACAAGGATTGGCTTGG...CTTGTCTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAATTCCTTTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CAA 90 bp GCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGCCAAGCCAATCCTTGTaGAGTAGGAATATGTTCTTC +
Preference number: 5 (lower is better)
Translates to: AQKVVSCYYFWRAATTGRPSQSL*SRNMFF
Trigger: GAAGAACATATTCCTACTCAACAAGGATTGGCTTGG...CCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp GCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGCAACCAAGCCAATCCTaGTTGAGTAGGAATATGTTC +
Preference number: 5 (lower is better)
Translates to: AQKVVSCYYFWRAATTGRQPSQS*LSRNMF
Trigger: GAACATATTCCTACTCAACAAGGATTGGCTTGGTTG...CCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CAGTCCTGCAGCCCACTAGCCATGTGTGTTATCTTCAGAGTGAGGATGTCCTCTCAACCAAGCCAATCCTaGTTGAGTAGGAATATGTTC +
Preference number: 5 (lower is better)
Translates to: QSCSPLAMCVIFRVRMSSQPSQS*LSRNMF
Trigger: GAACATATTCCTACTCAACAAGGATTGGCTTGGTTG...AGAGGACATCCTCACTCTGAAGATAACACACATGGCTAGTGGGCTGCAGGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CAA 90 bp TCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGGGAGCCCTCCAAAACTaGAATGAGTCATCTAAACCA +
Preference number: 5 (lower is better)
Translates to: SGNSCYTQLASTLAPLLMGALQN*NESSKP
Trigger: TGGTTTAGATGACTCATTCAAGTTTTGGAGGGCTCC...CATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp GACAGGTTCCAAGCTATTCTCAGCATATCTGACACCGGCTTCAAGGCCAAACAACAGGTAGAAGTGTTGTaGACTGCACAAGTGGCTGAA +
Preference number: 5 (lower is better)
Translates to: DRFQAILSISDTGFKAKQQVEVL*TAQVAE
Trigger: TTCAGCCACTTGTGCAGTCAACAACACTTCTACCTG...TTGTTTGGCCTTGAAGCCGGTGTCAGATATGCTGAGAATAGCTTGGAACCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CAA 90 bp GTTTCTTCTCGTGCCTGTGACTCTGTCAGAACCAAGAGGTCTAACAGTGGGTTTCTTCAGGTAGAAGTGTaGTTGACTGCACAAGTGGCT +
Preference number: 5 (lower is better)
Translates to: VSSRACDSVRTKRSNSGFLQVEV*LTAQVA
Trigger: AGCCACTTGTGCAGTCAACAACACTTCTACCTGAAG...AAACCCACTGTTAGACCTCTTGGTTCTGACAGAGTCACAGGCACGAGAAGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CAA 90 bp TGTGCTCTTCTACTGACAGCCAGCAGTGACATCAATGCATTTGCAGCTACTCTTACTTTCCTGGTGACCTaGAGCCACAAACTGGTCATG +
Preference number: 5 (lower is better)
Translates to: CALLLTASSDINAFAATLTFLVT*SHKLVM
Trigger: CATGACCAGTTTGTGGCTCAAGGTCACCAGGAAAGT...AAGAGTAGCTGCAAATGCATTGATGTCACTGCTGGCTGTCAGTAGAAGAGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CAA 90 bp CTTCTACTGACAGCCAGCAGTGACATCAATGCATTTGCAGCTACTCTTTTCAGGGCAATCGTCAAGAGGTaGTCCAAGAGGCTGCACATT +
Preference number: 5 (lower is better)
Translates to: LLLTASSDINAFAATLFRAIVKR*SKRLHI
Trigger: AATGTGCAGCCTCTTGGACAACCTCTTGACGATTGC...CCTGAAAAGAGTAGCTGCAAATGCATTGATGTCACTGCTGGCTGTCAGTAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CAGTATACAGGGCAGGACACGTGGCAGACAAGCCTGCACATGTGCAGAACATATTTCTATGAGATGAGCTaGTCGAAAAGCCTTTGCAGT +
Preference number: 5 (lower is better)
Translates to: QYTGQDTWQTSLHMCRTYFYEMS*SKSLCS
Trigger: ACTGCAAAGGCTTTTCGACAAGCTCATCTCATAGAA...ATATGTTCTGCACATGTGCAGGCTTGTCTGCCACGTGTCCTGCCCTGTATACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CATCCTGAATCACAAGGTCAGGCTCCACCAATAAACATGACTGCAGAAGCCTGGGAGAACAGAAAGGAATaGCAAGCTGGCAGTATACAG +
Preference number: 5 (lower is better)
Translates to: HPESQGQAPPINMTAEAWENRKE*QAGSIQ
Trigger: CTGTATACTGCCAGCTTGCAATTCCTTTCTGTTCTC...CCAGGCTTCTGCAGTCATGTTTATTGGTGGAGCCTGACCTTGTGATTCAGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CAA 90 bp TGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAAGAGAACAGAAAGGAATaGCAAGCTGGCAGTATACAG +
Preference number: 5 (lower is better)
Translates to: CREVARLQVTAATHSWLQENRKE*QAGSIQ
Trigger: CTGTATACTGCCAGCTTGCAATTCCTTTCTGTTCTC...TTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CAAGGTGTAGCATCCCATGGCACTCAGGAAGAATTAAGGAGCTGCACGAGGTTTCAGCATAAATGTGTTTaGCTCTTAGCCTGGAGATGC +
Preference number: 5 (lower is better)
Translates to: QGVASHGTQEELRSCTRFQHKCV*LLAWRC
Trigger: GCATCTCCAGGCTAAGAGCAAAACACATTTATGCTG...AAACCTCGTGCAGCTCCTTAATTCTTCCTGAGTGCCATGGGATGCTACACCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACAGCATAAATGTGTTTaGCTCTTAGCCTGGAGATGC +
Preference number: 5 (lower is better)
Translates to: CREVARLQVTAATHSWLQQHKCV*LLAWRC
Trigger: GCATCTCCAGGCTAAGAGCAAAACACATTTATGCTG...TTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CCATCAAAATCCAAGGCCAGAGAGAGTGCAAGACAGGGACAAGGTGAGCTTCAAGAAGTGAAGCCACTGTaGGACTACAGCATAAATGTG +
Preference number: 5 (lower is better)
Translates to: PSKSKARESARQGQGELQEVKPL*DYSINV
Trigger: CACATTTATGCTGTAGTCCAACAGTGGCTTCACTTC...TTGAAGCTCACCTTGTCCCTGTCTTGCACTCTCTCTGGCCTTGGATTTTGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp GGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGTGACATCAATGCATTaGCAGCTACTCTTTTCAGGA +
Preference number: 5 (lower is better)
Translates to: GTESCQLLLLLESCHNWTVTSMH*QLLFSG
Trigger: TCCTGAAAAGAGTAGCTGCAAATGCATTGATGTCAC...CGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp ACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGGTGACATCAATGCATTaGCAGCTACTCTTTTCAGGA +
Preference number: 5 (lower is better)
Translates to: TSSGNSCYTQLASTLAPLVTSMH*QLLFSG
Trigger: TCCTGAAAAGAGTAGCTGCAAATGCATTGATGTCAC...CAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp AAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGATCCTCTATGTGTAGCTaGAACAGGGTGTTGTCCACA +
Preference number: 5 (lower is better)
Translates to: KAQKVVSCYYFWRAATTGSSMCS*NRVLST
Trigger: TGTGGACAACACCCTGTTCAAGCTACACATAGAGGA...TCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp GGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGTTTATTTCCTCCTTTaGGCAATGCTAGAGAGAGGA +
Preference number: 5 (lower is better)
Translates to: GTESCQLLLLLESCHNWTVYFLL*AMLERG
Trigger: TCCTCTCTCTAGCATTGCCAAAAGGAGGAAATAAAC...CGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp GCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGTTTATTTCCTCCTTTaGGCAATGCTAGAGAGAGGA +
Preference number: 5 (lower is better)
Translates to: AATTGRCWSITSSLSHGKVYFLL*AMLERG
Trigger: TCCTCTCTCTAGCATTGCCAAAAGGAGGAAATAAAC...TTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGGAAGCCTCAGAATCATTaGTTGCCCATCTTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: HNWTVLEYHQFSLSWERRKPQNH*LPIFSR
Trigger: TCTGGAGAAGATGGGCAACAAATGATTCTGAGGCTT...CCTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGAAGCCTCAGAATCATTaGTTGCCCATCTTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: SSGNSCYTQLASTLAPLLKPQNH*LPIFSR
Trigger: TCTGGAGAAGATGGGCAACAAATGATTCTGAGGCTT...CAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp GGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGAATAAAGGGCTGCTCTaGTGCTTGTATTTGCTCATC +
Preference number: 5 (lower is better)
Translates to: GTESCQLLLLLESCHNWTNKGLL*CLYLLI
Trigger: GATGAGCAAATACAAGCACAAGAGCAGCCCTTTATT...CGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGGTCATTAGCCAGGATCTaGGGTTTATTTGCAGGACTG +
Preference number: 5 (lower is better)
Translates to: HNWTVLEYHQFSLSWERRSLARI*GLFAGL
Trigger: CAGTCCTGCAAATAAACCCAAGATCCTGGCTAATGA...CCTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TCTTCTCGTGCCTGTGACTCTGTCAGAACCAAGAGGTCTAACAGTGGGTTTGCATCATTAGCCAGGATCTaGGGTTTATTTGCAGGACTG +
Preference number: 5 (lower is better)
Translates to: SSRACDSVRTKRSNSGFASLARI*GLFAGL
Trigger: CAGTCCTGCAAATAAACCCAAGATCCTGGCTAATGA...TGCAAACCCACTGTTAGACCTCTTGGTTCTGACAGAGTCACAGGCACGAGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CAA 90 bp AAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGAACTTTAGCTCCCCTGTaGATGACTGTCAGCTTCAAG +
Preference number: 5 (lower is better)
Translates to: KAQKVVSCYYFWRAATTGTLAPL*MTVSFK
Trigger: CTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGT...TCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TGGGAAAGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACACACAACTGGACGGTGTaGGAGTATCACCAGTTCTCT +
Preference number: 5 (lower is better)
Translates to: WERRGSTLCREVARLQVTHNWTV*EYHQFS
Trigger: AGAGAACTGGTGATACTCCAACACCGTCCAGTTGTG...TGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCTTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp GAAAGGAATTGCAAGCTGGCAGTATACAGGGCAGGACACGTGGCAGACAAGCCTAAAAGGCACAGAAAGTaGTCAGCTGCTATTACTTCT +
Preference number: 5 (lower is better)
Translates to: ERNCKLAVYRAGHVADKPKRHRK*SAAITS
Trigger: AGAAGTAATAGCAGCTGACAACTTTCTGTGCCTTTT...AGGCTTGTCTGCCACGTGTCCTGCCCTGTATACTGCCAGCTTGCAATTCCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS TCA 90 bp GAGGAACAGCTGATTCCAGAATGGAGACACAAAACTGGGGAAGACTaGGCTGCTGGAATTGTAGTTCCAATGTGTCTTCAGTTTCCAGCT +
Preference number: 5 (lower is better)
Translates to: EEQLIPEWRHKTGED*AAGIVVPMCLQFPA
Trigger: AGCTGGAAACTGAAGACACATTGGAACTACAATTCCAGCAGCTCAGTCTTCCCCAGTTTTGTGTCTCCATTCTGGAATCAGCTGTTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000581583.1
ENST00000583043.5
ENST00000638251.1
ENST00000640376.1
ENST00000640769.2
CDS-3UTR CAA 90 bp TGGAGTAAGGACTCACAGCATGGTGTCCAATTACATGAACAGGTAGATGGTACCAACGTCAACCAAATGTaGGACTGCTGGGGGATACTT +
Preference number: 5 (lower is better)
Translates to: WSKDSQHGVQLHEQVDGTNVNQM*DCWGIL
Trigger: AAGTATCCCCCAGCAGTCCAACATTTGGTTGACGTT...GGTACCATCTACCTGTTCATGTAATTGGACACCATGCTGTGAGTCCTTACTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR CAA 90 bp TCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGCTGATAAAAACTCGCTaGCCTTTTCAACAGGGAGAA +
Preference number: 5 (lower is better)
Translates to: SGNSCYTQLASTLAPLLMLIKTR*PFQQGE
Trigger: TTCTCCCTGTTGAAAAGGCAAGCGAGTTTTTATCAG...CATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CAA 90 bp CCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGCTTCTGTGTCAGAACTaGCTTTGCTTAGAAGGAGAA +
Preference number: 5 (lower is better)
Translates to: PQLDGVGVSPVLSLMGKKLLCQN*LCLEGE
Trigger: TTCTCCTTCTAAGCAAAGCAAGTTCTGACACAGAAG...CTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
CDS-3UTR CAA 90 bp AAAAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGCTATTAGAGGACGCTTaGTATCAGCCCCTTCTTCAC +
Preference number: 5 (lower is better)
Translates to: KRHRKLSAAITSGELPQLLLEDA*YQPLLH
Trigger: GTGAAGAAGGGGCTGATACAAAGCGTCCTCTAATAG...CAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
CDS-3UTR CAA 90 bp AGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTGAGTGTGAGGCATGGTaGTACCAAACATTCTACAAC +
Preference number: 5 (lower is better)
Translates to: RRGSTLCREVARLQVTAAECEAW*YQTFYN
Trigger: GTTGTAGAATGTTTGGTACAACCATGCCTCACACTC...AGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
CDS-3UTR CAA 90 bp TGCAGCCCACTAGCCATGTGTGTTATCTTCAGAGTGAGGATGTCCTCTGTAGATGAGTGTGAGGCATGGTaGTACCAAACATTCTACAAC +
Preference number: 5 (lower is better)
Translates to: CSPLAMCVIFRVRMSSVDECEAW*YQTFYN
Trigger: GTTGTAGAATGTTTGGTACAACCATGCCTCACACTC...ATCTACAGAGGACATCCTCACTCTGAAGATAACACACATGGCTAGTGGGCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CAA 90 bp AGCAATCAGTTCTTTCTGAAGTTGTTGCCTGACAGCAGTCCGGATATCATCTGTCAGTTCTTTCTGAAGTaGTTGCCTGACAGCAGTCCG +
Preference number: 5 (lower is better)
Translates to: SNQFFLKLLPDSSPDIICQFFLK*LPDSSP
Trigger: CGGACTGCTGTCAGGCAACAACTTCAGAAAGAACTG...ACAGATGATATCCGGACTGCTGTCAGGCAACAACTTCAGAAAGAACTGATTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CAA 90 bp CATCCGTCACTTTCAGACACTGGAGCAGTTTCAGAGCCAGCTGCGTTTGAAAAACAGAGCCAGCTGCGTTaGAAAAACGTAAAGAAGTTC +
Preference number: 5 (lower is better)
Translates to: HPSLSDTGAVSEPAAFEKQSQLR*KNVKKF
Trigger: GAACTTCTTTACGTTTTTCAAACGCAGCTGGCTCTG...TTTTTCAAACGCAGCTGGCTCTGAAACTGCTCCAGTGTCTGAAAGTGACGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CAA 90 bp ACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTACAGAGCCAGCTGCGTTaGAAAAACGTAAAGAAGTTC +
Preference number: 5 (lower is better)
Translates to: TAGFNFSSPVDDCQLQGVQSQLR*KNVKKF
Trigger: GAACTTCTTTACGTTTTTCAAACGCAGCTGGCTCTG...TACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGTCCAAGCCAATCCTTGTaGAGTAGGAATATGTTCTTC +
Preference number: 5 (lower is better)
Translates to: HRKLSAAITSGELPQLDGPSQSL*SRNMFF
Trigger: GAAGAACATATTCCTACTCAACAAGGATTGGCTTGG...ACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CATCCTGAATCACAAGGTCAGGCTCCACCAATAAACATGACTGCAGAAGCCTGGCCAAGCCAATCCTTGTaGAGTAGGAATATGTTCTTC +
Preference number: 5 (lower is better)
Translates to: HPESQGQAPPINMTAEAWPSQSL*SRNMFF
Trigger: GAAGAACATATTCCTACTCAACAAGGATTGGCTTGG...CCAGGCTTCTGCAGTCATGTTTATTGGTGGAGCCTGACCTTGTGATTCAGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CAA 90 bp AAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGAGGAGCCCTCCAAAACTaGAATGAGTCATCTAAACCA +
Preference number: 5 (lower is better)
Translates to: KAQKVVSCYYFWRAATTGGALQN*NESSKP
Trigger: TGGTTTAGATGACTCATTCAAGTTTTGGAGGGCTCC...TCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TGCAGCCCACTAGCCATGTGTGTTATCTTCAGAGTGAGGATGTCCTCTGTAGATGGAGCCCTCCAAAACTaGAATGAGTCATCTAAACCA +
Preference number: 5 (lower is better)
Translates to: CSPLAMCVIFRVRMSSVDGALQN*NESSKP
Trigger: TGGTTTAGATGACTCATTCAAGTTTTGGAGGGCTCC...ATCTACAGAGGACATCCTCACTCTGAAGATAACACACATGGCTAGTGGGCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CAA 90 bp CTTTCCAGACAGGCAGCAAGCACAGTAATGACTTTTTCATTAGCCAGGATCTTGACTTTCCTGGTGACCTaGAGCCACAAACTGGTCATG +
Preference number: 5 (lower is better)
Translates to: LSRQAASTVMTFSLARILTFLVT*SHKLVM
Trigger: CATGACCAGTTTGTGGCTCAAGGTCACCAGGAAAGT...CAAGATCCTGGCTAATGAAAAAGTCATTACTGTGCTTGCTGCCTGTCTGGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CAA 90 bp TGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAATTCTATGAGATGAGCTaGTCGAAAAGCCTTTGCAGT +
Preference number: 5 (lower is better)
Translates to: CREVARLQVTAATHSWLQFYEMS*SKSLCS
Trigger: ACTGCAAAGGCTTTTCGACAAGCTCATCTCATAGAA...TTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGTTTCTATGAGATGAGCTaGTCGAAAAGCCTTTGCAGT +
Preference number: 5 (lower is better)
Translates to: HRKLSAAITSGELPQLDGFYEMS*SKSLCS
Trigger: ACTGCAAAGGCTTTTCGACAAGCTCATCTCATAGAA...ACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp ACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGAGAACAGAAAGGAATaGCAAGCTGGCAGTATACAG +
Preference number: 5 (lower is better)
Translates to: TAGFNFSSPVDDCQLQGVENRKE*QAGSIQ
Trigger: CTGTATACTGCCAGCTTGCAATTCCTTTCTGTTCTC...TACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGAGAACAGAAAGGAATaGCAAGCTGGCAGTATACAG +
Preference number: 5 (lower is better)
Translates to: LHTAGFNFSSPVDDCQLQENRKE*QAGSIQ
Trigger: CTGTATACTGCCAGCTTGCAATTCCTTTCTGTTCTC...TTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TATGAGGGTAGCATCTGCAATGCTACAGAGAAGTTCTATGAGATGAGCTTGTCGCCTGGAGATGCCCTTTaGCTTCTTCGGTCAAGAGAA +
Preference number: 5 (lower is better)
Translates to: YEGSICNATEKFYEMSLSPGDAL*LLRSRE
Trigger: TTCTCTTGACCGAAGAAGCAAAAGGGCATCTCCAGG...CGACAAGCTCATCTCATAGAACTTCTCTGTAGCATTGCAGATGCTACCCTCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CAA 90 bp AGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTCAGCATAAATGTGTTTaGCTCTTAGCCTGGAGATGC +
Preference number: 5 (lower is better)
Translates to: RRGSTLCREVARLQVTAAQHKCV*LLAWRC
Trigger: GCATCTCCAGGCTAAGAGCAAAACACATTTATGCTG...AGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp GTTTCTTCTCGTGCCTGTGACTCTGTCAGAACCAAGAGGTCTAACAGTGGGTTTGAAGTGAAGCCACTGTaGGACTACAGCATAAATGTG +
Preference number: 5 (lower is better)
Translates to: VSSRACDSVRTKRSNSGFEVKPL*DYSINV
Trigger: CACATTTATGCTGTAGTCCAACAGTGGCTTCACTTC...AAACCCACTGTTAGACCTCTTGGTTCTGACAGAGTCACAGGCACGAGAAGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CAA 90 bp TGCCTTCTGATAATTGTAAATCAGAGCCCAAAGGGCAGCTGCTCCAATCCTCTGGAAGTGAAGCCACTGTaGGACTACAGCATAAATGTG +
Preference number: 5 (lower is better)
Translates to: CLLIIVNQSPKGSCSNPLEVKPL*DYSINV
Trigger: CACATTTATGCTGTAGTCCAACAGTGGCTTCACTTC...CAGAGGATTGGAGCAGCTGCCCTTTGGGCTCTGATTTACAATTATCAGAAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp AGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGAAGTGAAGCCACTGTaGGACTACAGCATAAATGTG +
Preference number: 5 (lower is better)
Translates to: RGSTSSGNSCYTQLASTLEVKPL*DYSINV
Trigger: CACATTTATGCTGTAGTCCAACAGTGGCTTCACTTC...TAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CAAGGTGTAGCATCCCATGGCACTCAGGAAGAATTAAGGAGCTGCACGAGGTTTGTGACATCAATGCATTaGCAGCTACTCTTTTCAGGA +
Preference number: 5 (lower is better)
Translates to: QGVASHGTQEELRSCTRFVTSMH*QLLFSG
Trigger: TCCTGAAAAGAGTAGCTGCAAATGCATTGATGTCAC...AAACCTCGTGCAGCTCCTTAATTCTTCCTGAGTGCCATGGGATGCTACACCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGGTGACATCAATGCATTaGCAGCTACTCTTTTCAGGA +
Preference number: 5 (lower is better)
Translates to: SGNSCYTQLASTLAPLLMVTSMH*QLLFSG
Trigger: TCCTGAAAAGAGTAGCTGCAAATGCATTGATGTCAC...CATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGGTGACATCAATGCATTaGCAGCTACTCTTTTCAGGA +
Preference number: 5 (lower is better)
Translates to: SSGNSCYTQLASTLAPLLVTSMH*QLLFSG
Trigger: TCCTGAAAAGAGTAGCTGCAAATGCATTGATGTCAC...CAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp ACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGATCTGCTCCATGCAATaGTCTATAAGATTGGCTTTC +
Preference number: 5 (lower is better)
Translates to: TSSGNSCYTQLASTLAPLICSMQ*SIRLAF
Trigger: GAAAGCCAATCTTATAGACAATTGCATGGAGCAGAT...CAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp AGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCATCTGCTCCATGCAATaGTCTATAAGATTGGCTTTC +
Preference number: 5 (lower is better)
Translates to: SCYTQLASTLAPLLMTVSICSMQ*SIRLAF
Trigger: GAAAGCCAATCTTATAGACAATTGCATGGAGCAGAT...GCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp GTGATGGCACCAGCTTTCCTCAGGAGCATGGCCAGAAGATTAAATAAATGTGTCTCCTCTATGTGTAGCTaGAACAGGGTGTTGTCCACA +
Preference number: 5 (lower is better)
Translates to: VMAPAFLRSMARRLNKCVSSMCS*NRVLST
Trigger: TGTGGACAACACCCTGTTCAAGCTACACATAGAGGA...GACACATTTATTTAATCTTCTGGCCATGCTCCTGAGGAAAGCTGGTGCCATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGGTTTATTTCCTCCTTTaGGCAATGCTAGAGAGAGGA +
Preference number: 5 (lower is better)
Translates to: PQLDGVGVSPVLSLMGKKVYFLL*AMLERG
Trigger: TCCTCTCTCTAGCATTGCCAAAAGGAGGAAATAAAC...CTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CAAGGTGTAGCATCCCATGGCACTCAGGAAGAATTAAGGAGCTGCACGAGGTTTGTTTATTTCCTCCTTTaGGCAATGCTAGAGAGAGGA +
Preference number: 5 (lower is better)
Translates to: QGVASHGTQEELRSCTRFVYFLL*AMLERG
Trigger: TCCTCTCTCTAGCATTGCCAAAAGGAGGAAATAAAC...AAACCTCGTGCAGCTCCTTAATTCTTCCTGAGTGCCATGGGATGCTACACCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGGTTTATTTCCTCCTTTaGGCAATGCTAGAGAGAGGA +
Preference number: 5 (lower is better)
Translates to: SSGNSCYTQLASTLAPLLVYFLL*AMLERG
Trigger: TCCTCTCTCTAGCATTGCCAAAAGGAGGAAATAAAC...CAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TTGACTGCACAAGTGGCTGAAATTCAGTACTCCCCAATGAAGGTGCCACCGTTGGTTTATTTCCTCCTTTaGGCAATGCTAGAGAGAGGA +
Preference number: 5 (lower is better)
Translates to: LTAQVAEIQYSPMKVPPLVYFLL*AMLERG
Trigger: TCCTCTCTCTAGCATTGCCAAAAGGAGGAAATAAAC...CAACGGTGGCACCTTCATTGGGGAGTACTGAATTTCAGCCACTTGTGCAGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000679113.1
CDS-3UTR CAA 90 bp ACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAAAGCCTCAGAATCATTaGTTGCCCATCTTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: TAGFNFSSPVDDCQLQGVKPQNH*LPIFSR
Trigger: TCTGGAGAAGATGGGCAACAAATGATTCTGAGGCTT...TACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp AGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAAAGCCTCAGAATCATTaGTTGCCCATCTTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: RGSTSSGNSCYTQLASTLKPQNH*LPIFSR
Trigger: TCTGGAGAAGATGGGCAACAAATGATTCTGAGGCTT...TAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGAATAAAGGGCTGCTCTaGTGCTTGTATTTGCTCATC +
Preference number: 5 (lower is better)
Translates to: SSGNSCYTQLASTLAPLLNKGLL*CLYLLI
Trigger: GATGAGCAAATACAAGCACAAGAGCAGCCCTTTATT...CAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGAATAAAGGGCTGCTCTaGTGCTTGTATTTGCTCATC +
Preference number: 5 (lower is better)
Translates to: SGNSCYTQLASTLAPLLMNKGLL*CLYLLI
Trigger: GATGAGCAAATACAAGCACAAGAGCAGCCCTTTATT...CATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGAATAAAGGGCTGCTCTaGTGCTTGTATTTGCTCATC +
Preference number: 5 (lower is better)
Translates to: PQLDGVGVSPVLSLMGKKNKGLL*CLYLLI
Trigger: GATGAGCAAATACAAGCACAAGAGCAGCCCTTTATT...CTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGTAATAAAGGGCTGCTCTaGTGCTTGTATTTGCTCATC +
Preference number: 5 (lower is better)
Translates to: HRKLSAAITSGELPQLDGNKGLL*CLYLLI
Trigger: GATGAGCAAATACAAGCACAAGAGCAGCCCTTTATT...ACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp GGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGTTGGGAAAGTTTTCTTaGCTAAGGAGTATGCTTCAT +
Preference number: 5 (lower is better)
Translates to: GELPQLDGVGVSPVLSLMLGKFS*LRSMLH
Trigger: ATGAAGCATACTCCTTAGCAAAGAAAACTTTCCCAA...CATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TGTGCTCTTCTACTGACAGCCAGCAGTGACATCAATGCATTTGCAGCTACTCTTGGAAACCTGCATAGGTaGGAATCTATGTCAGAGACC +
Preference number: 5 (lower is better)
Translates to: CALLLTASSDINAFAATLGNLHR*ESMSET
Trigger: GGTCTCTGACATAGATTCCAACCTATGCAGGTTTCC...AAGAGTAGCTGCAAATGCATTGATGTCACTGCTGGCTGTCAGTAGAAGAGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679113.1
CDS-3UTR CAA 90 bp GCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAATGCTGGAAATTACTTTaGTCTTGGGGAAAATATCCT +
Preference number: 5 (lower is better)
Translates to: AATTGRCWSITSSLSHGKCWKLL*SWGKYP
Trigger: AGGATATTTTCCCCAAGACAAAAGTAATTTCCAGCA...TTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000640769.2
CDS-3UTR CAA 90 bp TGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTCAGCAGGAAAATCTaGCATGATAACATCCTTCAA +
Preference number: 5 (lower is better)
Translates to: CREVARLQVTAATHSWLQLSRKI*HDNILQ
Trigger: TTGAAGGATGTTATCATGCAAGATTTTCCTGCTGAG...TTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000640769.2
CDS-3UTR CAA 90 bp AGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCAATGATGAGTACCTCTaGCTTCATGACAATAAGACA +
Preference number: 5 (lower is better)
Translates to: SCYTQLASTLAPLLMTVSNDEYL*LHDNKT
Trigger: TGTCTTATTGTCATGAAGCAAGAGGTACTCATCATT...GCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CAA 90 bp CTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAATGATGAGTACCTCTaGCTTCATGACAATAAGACA +
Preference number: 5 (lower is better)
Translates to: LPQLDGVGVSPVLSLMGKNDEYL*LHDNKT
Trigger: TGTCTTATTGTCATGAAGCAAGAGGTACTCATCATT...CTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CAA 90 bp AGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTACTGATAAAAACTCGCTaGCCTTTTCAACAGGGAGAA +
Preference number: 5 (lower is better)
Translates to: RGSTSSGNSCYTQLASTLLIKTR*PFQQGE
Trigger: TTCTCCCTGTTGAAAAGGCAAGCGAGTTTTTATCAG...TAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CAA 90 bp AAAAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGTACAGGTGCATTCAATaGAATAAACGGCCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: KRHRKLSAAITSGELPQLYRCIQ*NKRPLQ
Trigger: CTGCAGAGGCCGTTTATTCAATTGAATGCACCTGTA...CAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CAA 90 bp GGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCATCCAGAGATTCAATAAACTaGTTCCAGGTCAATGCTGTC +
Preference number: 5 (lower is better)
Translates to: GFNFSSPVDDCQLQGVASRDSIN*FQVNAV
Trigger: GACAGCATTGACCTGGAACAAGTTTATTGAATCTCT...GGATGCTACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CAA 90 bp TGGGAAAGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACAGAGTGTGAGGCATGGTaGTACCAAACATTCTACAAC +
Preference number: 5 (lower is better)
Translates to: WERRGSTLCREVARLQVTECEAW*YQTFYN
Trigger: GTTGTAGAATGTTTGGTACAACCATGCCTCACACTC...TGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCTTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
CDS-3UTR CAA 90 bp AGGTCAATGCTGTCATCATCAATCGTCCCTGAAGCAGGTATAACAGAATGGCCTCAGAGCCAGCTGCGTTaGAAAAACGTAAAGAAGTTC +
Preference number: 5 (lower is better)
Translates to: RSMLSSSIVPEAGITEWPQSQLR*KNVKKF
Trigger: GAACTTCTTTACGTTTTTCAAACGCAGCTGGCTCTG...AGGCCATTCTGTTATACCTGCTTCAGGGACGATTGATGATGACAGCATTGACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR CAA 90 bp CTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAACAACCAAGCCAATCCTaGTTGAGTAGGAATATGTTC +
Preference number: 5 (lower is better)
Translates to: LHTAGFNFSSPVDDCQLQQPSQS*LSRNMF
Trigger: GAACATATTCCTACTCAACAAGGATTGGCTTGGTTG...TTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp ACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTATTCTATGAGATGAGCTaGTCGAAAAGCCTTTGCAGT +
Preference number: 5 (lower is better)
Translates to: TAGFNFSSPVDDCQLQGVFYEMS*SKSLCS
Trigger: ACTGCAAAGGCTTTTCGACAAGCTCATCTCATAGAA...TACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp AAATCAGTAACTCTGGAGAGAACTCTGGCGTCTATTAGAGGACGCTTTGTATCACCTGGAGATGCCCTTTaGCTTCTTCGGTCAAGAGAA +
Preference number: 5 (lower is better)
Translates to: KSVTLERTLASIRGRFVSPGDAL*LLRSRE
Trigger: TTCTCTTGACCGAAGAAGCAAAAGGGCATCTCCAGG...TGATACAAAGCGTCCTCTAATAGACGCCAGAGTTCTCTCCAGAGTTACTGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581161.5
CDS-3UTR CAA 90 bp ACTTTCCAGACAGGCAGCAAGCACAGTAATGACTTTTTCATTAGCCAGGATCTTCCTGGAGATGCCCTTTaGCTTCTTCGGTCAAGAGAA +
Preference number: 5 (lower is better)
Translates to: TFQTGSKHSNDFFISQDLPGDAL*LLRSRE
Trigger: TTCTCTTGACCGAAGAAGCAAAAGGGCATCTCCAGG...AAGATCCTGGCTAATGAAAAAGTCATTACTGTGCTTGCTGCCTGTCTGGAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TGGGAAAGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACAGAAGTGAAGCCACTGTaGGACTACAGCATAAATGTG +
Preference number: 5 (lower is better)
Translates to: WERRGSTLCREVARLQVTEVKPL*DYSINV
Trigger: CACATTTATGCTGTAGTCCAACAGTGGCTTCACTTC...TGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCTTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp AGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGTGACATCAATGCATTaGCAGCTACTCTTTTCAGGA +
Preference number: 5 (lower is better)
Translates to: RGSTSSGNSCYTQLASTLVTSMH*QLLFSG
Trigger: TCCTGAAAAGAGTAGCTGCAAATGCATTGATGTCAC...TAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp GCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCAATCTGCTCCATGCAATaGTCTATAAGATTGGCTTTC +
Preference number: 5 (lower is better)
Translates to: AGFNFSSPVDDCQLQGVAICSMQ*SIRLAF
Trigger: GAAAGCCAATCTTATAGACAATTGCATGGAGCAGAT...TGCTACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp ACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGGAGAACTGCAACCATTaGGAAAATTTGCAGTATAGA +
Preference number: 5 (lower is better)
Translates to: TSSGNSCYTQLASTLAPLENCNH*ENLQYR
Trigger: TCTATACTGCAAATTTTCCAAATGGTTGCAGTTCTC...CAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
CDS-3UTR CAA 90 bp ACTGGTCCAGAAGAATGTTCACCACAGTTCCCCAGAGCCCACCGGAAATGTTCTGAGAACTGCAACCATTaGGAAAATTTGCAGTATAGA +
Preference number: 5 (lower is better)
Translates to: TGPEECSPQFPRAHRKCSENCNH*ENLQYR
Trigger: TCTATACTGCAAATTTTCCAAATGGTTGCAGTTCTC...AGAACATTTCCGGTGGGCTCTGGGGAACTGTGGTGAACATTCTTCTGGACCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CAA 90 bp CTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGTTTATTTCCTCCTTTaGGCAATGCTAGAGAGAGGA +
Preference number: 5 (lower is better)
Translates to: LHTAGFNFSSPVDDCQLQVYFLL*AMLERG
Trigger: TCCTCTCTCTAGCATTGCCAAAAGGAGGAAATAAAC...TTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGCTCTTGTGCTTGTATTaGCTCATCTCTGTTAGTAAG +
Preference number: 5 (lower is better)
Translates to: PQLDGVGVSPVLSLMGKKLLCLY*LISVSK
Trigger: CTTACTAACAGAGATGAGCAAATACAAGCACAAGAG...CTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TGGTGTTCTCCAGTGGCATCTGGGAAGCCAACTTTAGGATACACAGCATCAGAGCTCTTGTGCTTGTATTaGCTCATCTCTGTTAGTAAG +
Preference number: 5 (lower is better)
Translates to: WCSPVASGKPTLGYTASELLCLY*LISVSK
Trigger: CTTACTAACAGAGATGAGCAAATACAAGCACAAGAG...CTCTGATGCTGTGTATCCTAAAGTTGGCTTCCCAGATGCCACTGGAGAACACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGTCTCTTGTGCTTGTATTaGCTCATCTCTGTTAGTAAG +
Preference number: 5 (lower is better)
Translates to: HRKLSAAITSGELPQLDGLLCLY*LISVSK
Trigger: CTTACTAACAGAGATGAGCAAATACAAGCACAAGAG...ACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TTGACTGCACAAGTGGCTGAAATTCAGTACTCCCCAATGAAGGTGCCACCGTTGCTCTTGTGCTTGTATTaGCTCATCTCTGTTAGTAAG +
Preference number: 5 (lower is better)
Translates to: LTAQVAEIQYSPMKVPPLLLCLY*LISVSK
Trigger: CTTACTAACAGAGATGAGCAAATACAAGCACAAGAG...CAACGGTGGCACCTTCATTGGGGAGTACTGAATTTCAGCCACTTGTGCAGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CAA 90 bp TGGGAAAGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACATCATTAGCCAGGATCTaGGGTTTATTTGCAGGACTG +
Preference number: 5 (lower is better)
Translates to: WERRGSTLCREVARLQVTSLARI*GLFAGL
Trigger: CAGTCCTGCAAATAAACCCAAGATCCTGGCTAATGA...TGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCTTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp ACTTTCCAGACAGGCAGCAAGCACAGTAATGACTTTTTCATTAGCCAGGATCTTCACAACTGGACGGTGTaGGAGTATCACCAGTTCTCT +
Preference number: 5 (lower is better)
Translates to: TFQTGSKHSNDFFISQDLHNWTV*EYHQFS
Trigger: AGAGAACTGGTGATACTCCAACACCGTCCAGTTGTG...AAGATCCTGGCTAATGAAAAAGTCATTACTGTGCTTGCTGCCTGTCTGGAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGAAAAGGCACAGAAAGTaGTCAGCTGCTATTACTTCT +
Preference number: 5 (lower is better)
Translates to: SSGNSCYTQLASTLAPLLKRHRK*SAAITS
Trigger: AGAAGTAATAGCAGCTGACAACTTTCTGTGCCTTTT...CAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGGAAAAGGCACAGAAAGTaGTCAGCTGCTATTACTTCT +
Preference number: 5 (lower is better)
Translates to: HNWTVLEYHQFSLSWERRKRHRK*SAAITS
Trigger: AGAAGTAATAGCAGCTGACAACTTTCTGTGCCTTTT...CCTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGGTAAAAGGCACAGAAAGTaGTCAGCTGCTATTACTTCT +
Preference number: 5 (lower is better)
Translates to: HRKLSAAITSGELPQLDGKRHRK*SAAITS
Trigger: AGAAGTAATAGCAGCTGACAACTTTCTGTGCCTTTT...ACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TTCTGGAGAGCTGCCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTTTGGGAAAGTTTTCTTaGCTAAGGAGTATGCTTCAT +
Preference number: 5 (lower is better)
Translates to: FWRAATTGRCWSITSSLSLGKFS*LRSMLH
Trigger: ATGAAGCATACTCCTTAGCAAAGAAAACTTTCCCAA...AGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGGCAGCTCTCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp AAGGCCAGAGAGAGTGCAAGACAGGGACAAGGTGAGCTTCAAGAGCTGCTTCTTTTGGGAAAGTTTTCTTaGCTAAGGAGTATGCTTCAT +
Preference number: 5 (lower is better)
Translates to: KARESARQGQGELQELLLLGKFS*LRSMLH
Trigger: ATGAAGCATACTCCTTAGCAAAGAAAACTTTCCCAA...AAGAAGCAGCTCTTGAAGCTCACCTTGTCCCTGTCTTGCACTCTCTCTGGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CAGTATACAGGGCAGGACACGTGGCAGACAAGCCTGCACATGTGCAGAACATATTTGGGAAAGTTTTCTTaGCTAAGGAGTATGCTTCAT +
Preference number: 5 (lower is better)
Translates to: QYTGQDTWQTSLHMCRTYLGKFS*LRSMLH
Trigger: ATGAAGCATACTCCTTAGCAAAGAAAACTTTCCCAA...ATATGTTCTGCACATGTGCAGGCTTGTCTGCCACGTGTCCTGCCCTGTATACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TGGGAAGCCAACTTTAGGATACACAGCATCAGAGAGTTGCTCACGGCTCCTCTAGGTTTGCTTCTGAGTTaGGGAAAGTTTTCTTTGCTA +
Preference number: 5 (lower is better)
Translates to: WEANFRIHSIRELLTAPLGLLLS*GKFSLL
Trigger: TAGCAAAGAAAACTTTCCCAAACTCAGAAGCAAACC...TAGAGGAGCCGTGAGCAACTCTCTGATGCTGTGTATCCTAAAGTTGGCTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp GGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACGCAGTGTTCTCTCCATTaGGAAAATTTGCAGTATAGA +
Preference number: 5 (lower is better)
Translates to: GTESCQLLLLLESCHNWTQCSLH*ENLQYR
Trigger: TCTATACTGCAAATTTTCCAAATGGAGAGAACACTG...CGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679113.1
CDS TCA 90 bp CACGGCTCCTCTATGTGTAGCTTGAACAGGGTGTTGTCCACAACTTaGCCAACAAAGAGAACTGCAACCTTCAAAAATAACAGCCTATCA +
Preference number: 5 (lower is better)
Translates to: HGSSMCSLNRVLSTT*PTKRTATFKNNSLS
Trigger: TGATAGGCTGTTATTTTTGAAGGTTGCAGTTCTCTTTGTTGGTCAAGTTGTGGACAACACCCTGTTCAAGCTACACATAGAGGAGCCGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000580034.2
ENST00000639128.1
CDS TCA 90 bp TATGCCGGCACTCTGATCTTGGACTTTCAGCTTCCAAAACTTCTATaGGAAAAGAAGTGTCTGTTGTCTAAGCCACCCAGTCTGTGGTAT +
Preference number: 5 (lower is better)
Translates to: YAGTLILDFQLPKLL*EKKCLLSKPPSLWY
Trigger: ATACCACAGACTGGGTGGCTTAGACAACAGACACTTCTTTTCTCATAGAAGTTTTGGAAGCTGAAAGTCCAAGATCAGAGTGCCGGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581709.1
CDS GCA 90 bp GCTGCTGCTTCCTGGGGAAGGATTCTGGGAATGATGAGTACCTCTTaGTTCATGACAATAAGACAAAGAAGAATTTTGGGAAACTGTGTC +
Preference number: 5 (lower is better)
Translates to: AAASWGRILGMMSTS*FMTIRQRRILGNCV
Trigger: GACACAGTTTCCCAAAATTCTTCTTTGTCTTATTGTCATGAAGCAAGAGGTACTCATCATTCCCAGAATCCTTCCCCAGGAAGCAGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000581583.1
ENST00000583043.5
ENST00000638251.1
ENST00000640376.1
ENST00000640736.1
ENST00000640769.2
CDS GCA 90 bp AAAACTGACCTTCTGATAATTGTAAATCAGAGCCCAAAGGGCAGCTaGTCCAATCCTCTGAGCATTTTGATTCTCACTTTCCAGACAGGC +
Preference number: 5 (lower is better)
Translates to: KTDLLIIVNQSPKGS*SNPLSILILTFQTG
Trigger: GCCTGTCTGGAAAGTGAGAATCAAAATGCTCAGAGGATTGGAGCAGCTGCCCTTTGGGCTCTGATTTACAATTATCAGAAGGTCAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638799.1
ENST00000640525.1
CDS-3UTR CAA 90 bp AAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGACAAATGAAGAAAAAGTaGCCTCTCCTGAATGAGATC +
Preference number: 5 (lower is better)
Translates to: KAQKVVSCYYFWRAATTGQMKKK*PLLNEI
Trigger: GATCTCATTCAGGAGAGGCAACTTTTTCTTCATTTG...TCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255674.11
ENST00000640769.2
CDS-3UTR CAA 90 bp ACTTTCCAGACAGGCAGCAAGCACAGTAATGACTTTTTCATTAGCCAGGATCTTAACGTCAACCAAATGTaGGACTGCTGGGGGATACTT +
Preference number: 5 (lower is better)
Translates to: TFQTGSKHSNDFFISQDLNVNQM*DCWGIL
Trigger: AAGTATCCCCCAGCAGTCCAACATTTGGTTGACGTT...AAGATCCTGGCTAATGAAAAAGTCATTACTGTGCTTGCTGCCTGTCTGGAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000581161.5
CDS-3UTR CAA 90 bp CTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAACTCAGCAGGAAAATCTaGCATGATAACATCCTTCAA +
Preference number: 5 (lower is better)
Translates to: LHTAGFNFSSPVDDCQLQLSRKI*HDNILQ
Trigger: TTGAAGGATGTTATCATGCAAGATTTTCCTGCTGAG...TTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000640769.2
CDS-3UTR CAA 90 bp TCTGTTTCTTCTCGTGCCTGTGACTCTGTCAGAACCAAGAGGTCTAACAGTGGGAATGATGAGTACCTCTaGCTTCATGACAATAAGACA +
Preference number: 5 (lower is better)
Translates to: SVSSRACDSVRTKRSNSGNDEYL*LHDNKT
Trigger: TGTCTTATTGTCATGAAGCAAGAGGTACTCATCATT...CCCACTGTTAGACCTCTTGGTTCTGACAGAGTCACAGGCACGAGAAGAAACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CAA 90 bp TGCTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAATGATGAGTACCTCTaGCTTCATGACAATAAGACA +
Preference number: 5 (lower is better)
Translates to: CYTQLASTLAPLLMTVSFNDEYL*LHDNKT
Trigger: TGTCTTATTGTCATGAAGCAAGAGGTACTCATCATT...GAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CAA 90 bp GGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCATCCGTAACTTCCATGAAATaGAGCAGCAAGGTATCAAAA +
Preference number: 5 (lower is better)
Translates to: GFNFSSPVDDCQLQGVASVTSMK*SSKVSK
Trigger: TTTTGATACCTTGCTGCTCAATTTCATGGAAGTTAC...GGATGCTACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp AGGTCAATGCTGTCATCATCAATCGTCCCTGAAGCAGGTATAACAGAATGGCCTCCAAGCCAATCCTTGTaGAGTAGGAATATGTTCTTC +
Preference number: 5 (lower is better)
Translates to: RSMLSSSIVPEAGITEWPPSQSL*SRNMFF
Trigger: GAAGAACATATTCCTACTCAACAAGGATTGGCTTGG...AGGCCATTCTGTTATACCTGCTTCAGGGACGATTGATGATGACAGCATTGACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR CAA 90 bp TGGGAAAGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACACAACCAAGCCAATCCTaGTTGAGTAGGAATATGTTC +
Preference number: 5 (lower is better)
Translates to: WERRGSTLCREVARLQVTQPSQS*LSRNMF
Trigger: GAACATATTCCTACTCAACAAGGATTGGCTTGGTTG...TGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCTTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp AAGCTGTTTTTGCCTTCTGATAATTGTAAATCAGAGCCCAAAGGGCAGCTGCTCGGAGCCCTCCAAAACTaGAATGAGTCATCTAAACCA +
Preference number: 5 (lower is better)
Translates to: KLFLPSDNCKSEPKGQLLGALQN*NESSKP
Trigger: TGGTTTAGATGACTCATTCAAGTTTTGGAGGGCTCC...GAGCAGCTGCCCTTTGGGCTCTGATTTACAATTATCAGAAGGCAAAAACAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CAA 90 bp TATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAAGATGAAGGTGCCACCGTaGTTTCTGAGGTGGAGAGAG +
Preference number: 5 (lower is better)
Translates to: YVPRTFYAFSTERKRHRKMKVPP*FLRWRE
Trigger: CTCTCTCCACCTCAGAAACAACGGTGGCACCTTCAT...CTTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TATCACTCCCATGATACCATGACAGGTTCCAAGCTATTCTCAGCATATCTGACACAGGTAGAAGTGTTGTaGACTGCACAAGTGGCTGAA +
Preference number: 5 (lower is better)
Translates to: YHSHDTMTGSKLFSAYLTQVEVL*TAQVAE
Trigger: TTCAGCCACTTGTGCAGTCAACAACACTTCTACCTG...TGTCAGATATGCTGAGAATAGCTTGGAACCTGTCATGGTATCATGGGAGTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CAA 90 bp ACTTTCCAGACAGGCAGCAAGCACAGTAATGACTTTTTCATTAGCCAGGATCTTCTTCAGGTAGAAGTGTaGTTGACTGCACAAGTGGCT +
Preference number: 5 (lower is better)
Translates to: TFQTGSKHSNDFFISQDLLQVEV*LTAQVA
Trigger: AGCCACTTGTGCAGTCAACAACACTTCTACCTGAAG...AAGATCCTGGCTAATGAAAAAGTCATTACTGTGCTTGCTGCCTGTCTGGAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CAA 90 bp GGCAATAAAGGGCTGCTCTTGTGCTTGTATTTGCTCATCTCTGTTAGTAAGTCTACAAAAACACACAGTTaGGGCAGGGGAGCAGAAAGA +
Preference number: 5 (lower is better)
Translates to: GNKGLLLCLYLLISVSKSTKTHS*GRGAER
Trigger: TCTTTCTGCTCCCCTGCCCAAACTGTGTGTTTTTGT...AGACTTACTAACAGAGATGAGCAAATACAAGCACAAGAGCAGCCCTTTATTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CAA 90 bp GGCTTTTCAAAGCTGTTTTTGCCTTCTGATAATTGTAAATCAGAGCCCAAAGGGGCAATCGTCAAGAGGTaGTCCAAGAGGCTGCACATT +
Preference number: 5 (lower is better)
Translates to: GFSKLFLPSDNCKSEPKGAIVKR*SKRLHI
Trigger: AATGTGCAGCCTCTTGGACAACCTCTTGACGATTGC...CCCTTTGGGCTCTGATTTACAATTATCAGAAGGCAAAAACAGCTTTGAAAAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CTTTCCAGACAGGCAGCAAGCACAGTAATGACTTTTTCATTAGCCAGGATCTTGCAGCATAAATGTGTTTaGCTCTTAGCCTGGAGATGC +
Preference number: 5 (lower is better)
Translates to: LSRQAASTVMTFSLARILQHKCV*LLAWRC
Trigger: GCATCTCCAGGCTAAGAGCAAAACACATTTATGCTG...CAAGATCCTGGCTAATGAAAAAGTCATTACTGTGCTTGCTGCCTGTCTGGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CAGCCAGCAGTGACATCAATGCATTTGCAGCTACTCTTTTCAGGATATCTTTGGCAGCATAAATGTGTTTaGCTCTTAGCCTGGAGATGC +
Preference number: 5 (lower is better)
Translates to: QPAVTSMHLQLLFSGYLWQHKCV*LLAWRC
Trigger: GCATCTCCAGGCTAAGAGCAAAACACATTTATGCTG...CCAAAGATATCCTGAAAAGAGTAGCTGCAAATGCATTGATGTCACTGCTGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp AGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTATCTGCTCCATGCAATaGTCTATAAGATTGGCTTTC +
Preference number: 5 (lower is better)
Translates to: RRGSTLCREVARLQVTAAICSMQ*SIRLAF
Trigger: GAAAGCCAATCTTATAGACAATTGCATGGAGCAGAT...AGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CCACAACTGGACGGTGTTGGAGTATCACCAGTTCTCTCTCTCATGGGAAAGAAGGAGAACTGCAACCATTaGGAAAATTTGCAGTATAGA +
Preference number: 5 (lower is better)
Translates to: PQLDGVGVSPVLSLMGKKENCNH*ENLQYR
Trigger: TCTATACTGCAAATTTTCCAAATGGTTGCAGTTCTC...CTTCTTTCCCATGAGAGAGAGAACTGGTGATACTCCAACACCGTCCAGTTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
CDS-3UTR CAA 90 bp CAGCCAGCAGTGACATCAATGCATTTGCAGCTACTCTTTTCAGGATATCTTTGGAAGCCTCAGAATCATTaGTTGCCCATCTTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: QPAVTSMHLQLLFSGYLWKPQNH*LPIFSR
Trigger: TCTGGAGAAGATGGGCAACAAATGATTCTGAGGCTT...CCAAAGATATCCTGAAAAGAGTAGCTGCAAATGCATTGATGTCACTGCTGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp AGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTACTCTTGTGCTTGTATTaGCTCATCTCTGTTAGTAAG +
Preference number: 5 (lower is better)
Translates to: RGSTSSGNSCYTQLASTLLLCLY*LISVSK
Trigger: CTTACTAACAGAGATGAGCAAATACAAGCACAAGAG...TAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAACTCTTGTGCTTGTATTaGCTCATCTCTGTTAGTAAG +
Preference number: 5 (lower is better)
Translates to: LHTAGFNFSSPVDDCQLQLLCLY*LISVSK
Trigger: CTTACTAACAGAGATGAGCAAATACAAGCACAAGAG...TTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CAGACACTGGAGCAGTTTCAGAGCCAGCTGCGTTTGAAAAACGTAAAGAAGTTCAATAAAGGGCTGCTCTaGTGCTTGTATTTGCTCATC +
Preference number: 5 (lower is better)
Translates to: QTLEQFQSQLRLKNVKKFNKGLL*CLYLLI
Trigger: GATGAGCAAATACAAGCACAAGAGCAGCCCTTTATT...GAACTTCTTTACGTTTTTCAAACGCAGCTGGCTCTGAAACTGCTCCAGTGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CAA 90 bp AGACAGGCAGCAAGCACAGTAATGACTTTTTCATTAGCCAGGATCTTGGGTTTAACTTTAGCTCCCCTGTaGATGACTGTCAGCTTCAAG +
Preference number: 5 (lower is better)
Translates to: RQAASTVMTFSLARILGLTLAPL*MTVSFK
Trigger: CTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGT...TAAACCCAAGATCCTGGCTAATGAAAAAGTCATTACTGTGCTTGCTGCCTGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp GCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGCATTGGGAAAGTTTTCTTaGCTAAGGAGTATGCTTCAT +
Preference number: 5 (lower is better)
Translates to: AGFNFSSPVDDCQLQGVALGKFS*LRSMLH
Trigger: ATGAAGCATACTCCTTAGCAAAGAAAACTTTCCCAA...TGCTACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp ACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGGTGTAGGTTTGCTTCTGAGTTaGGGAAAGTTTTCTTTGCTA +
Preference number: 5 (lower is better)
Translates to: TAGFNFSSPVDDCQLQGVGLLLS*GKFSLL
Trigger: TAGCAAAGAAAACTTTCCCAAACTCAGAAGCAAACC...TACACCTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS TCA 90 bp TTCAGTTTCCAGCTCTGGCAGATCTATGTGTCCCATATCCAAAGGTaGATGAACGGATATCCTGGAGTTTACATGAGCATGACTACTACT +
Preference number: 5 (lower is better)
Translates to: FSFQLWQIYVSHIQR*MNGYPGVYMSMTTT
Trigger: AGTAGTAGTCATGCTCATGTAAACTCCAGGATATCCGTTCATTCACCTTTGGATATGGGACACATAGATCTGCCAGAGCTGGAAACTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000581583.1
ENST00000583043.5
ENST00000638251.1
ENST00000640376.1
ENST00000640769.2
CDS CCA 90 bp ATGGAGAATGAGTTTGACGAAGTGACAGAAGCAGGCTTCAGAAGGTaGGTAATAACAAACTCCTCCAAGCTAAAGAAGCATGTTCTAACC +
Preference number: 5 (lower is better)
Translates to: MENEFDEVTEAGFRR*VITNSSKLKKHVLT
Trigger: GGTTAGAACATGCTTCTTTAGCTTGGAGGAGTTTGTTATTACCCACCTTCTGAAGCCTGCTTCTGTCACTTCGTCAAACTCATTCTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638799.1
CDS-3UTR CAA 90 bp CTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAAATGATGAGTACCTCTaGCTTCATGACAATAAGACA +
Preference number: 5 (lower is better)
Translates to: LHTAGFNFSSPVDDCQLQNDEYL*LHDNKT
Trigger: TGTCTTATTGTCATGAAGCAAGAGGTACTCATCATT...TTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
CDS-3UTR CAA 90 bp CCCTTTACAAATAATGCACACTTACTTCTACATAGCCCTTTTCCAGTGTGGATGTATAACAGAATGGCCTaGGCAGCAGTGTTCACCTCA +
Preference number: 5 (lower is better)
Translates to: PFTNNAHLLLHSPFPVWMYNRMA*AAVFTS
Trigger: TGAGGTGAACACTGCTGCCAAGGCCATTCTGTTATA...CATCCACACTGGAAAAGGGCTATGTAGAAGTAAGTGTGCATTATTTGTAAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640769.2
CDS-3UTR CAA 90 bp TGGAGTAAGGACTCACAGCATGGTGTCCAATTACATGAACAGGTAGATGGTACCAGAGATTCAATAAACTaGTTCCAGGTCAATGCTGTC +
Preference number: 5 (lower is better)
Translates to: WSKDSQHGVQLHEQVDGTRDSIN*FQVNAV
Trigger: GACAGCATTGACCTGGAACAAGTTTATTGAATCTCT...GGTACCATCTACCTGTTCATGTAATTGGACACCATGCTGTGAGTCCTTACTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CAA 90 bp CAGCCAGCAGTGACATCAATGCATTTGCAGCTACTCTTTTCAGGATATCTTTGGCTTCTGTGTCAGAACTaGCTTTGCTTAGAAGGAGAA +
Preference number: 5 (lower is better)
Translates to: QPAVTSMHLQLLFSGYLWLLCQN*LCLEGE
Trigger: TTCTCCTTCTAAGCAAAGCAAGTTCTGACACAGAAG...CCAAAGATATCCTGAAAAGAGTAGCTGCAAATGCATTGATGTCACTGCTGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CAA 90 bp AAATCAGTAACTCTGGAGAGAACTCTGGCGTCTATTAGAGGACGCTTTGTATCAGAGTGTGAGGCATGGTaGTACCAAACATTCTACAAC +
Preference number: 5 (lower is better)
Translates to: KSVTLERTLASIRGRFVSECEAW*YQTFYN
Trigger: GTTGTAGAATGTTTGGTACAACCATGCCTCACACTC...TGATACAAAGCGTCCTCTAATAGACGCCAGAGTTCTCTCCAGAGTTACTGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR CAA 90 bp AGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGTAACTTCCATGAAATaGAGCAGCAAGGTATCAAAA +
Preference number: 5 (lower is better)
Translates to: RGSTSSGNSCYTQLASTLVTSMK*SSKVSK
Trigger: TTTTGATACCTTGCTGCTCAATTTCATGGAAGTTAC...TAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp AGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTGTAACTTCCATGAAATaGAGCAGCAAGGTATCAAAA +
Preference number: 5 (lower is better)
Translates to: RRGSTLCREVARLQVTAAVTSMK*SSKVSK
Trigger: TTTTGATACCTTGCTGCTCAATTTCATGGAAGTTAC...AGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TTTTCTTTGCTAAGGAGTATGCTTCATCCACTCTTCTTTTTACTGATGGGCTTTTGTTCTGACAACTGTTaGCTAAGGCCACACAGCCCG +
Preference number: 5 (lower is better)
Translates to: FSLLRSMLHPLFFLLMGFCSDNC*LRPHSP
Trigger: CGGGCTGTGTGGCCTTAGCAAACAGTTGTCAGAACA...AAAGCCCATCAGTAAAAAGAAGAGTGGATGAAGCATACTCCTTAGCAAAGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CAA 90 bp AGACAGGCAGCAAGCACAGTAATGACTTTTTCATTAGCCAGGATCTTGGGTTTAGGAGCCCTCCAAAACTaGAATGAGTCATCTAAACCA +
Preference number: 5 (lower is better)
Translates to: RQAASTVMTFSLARILGLGALQN*NESSKP
Trigger: TGGTTTAGATGACTCATTCAAGTTTTGGAGGGCTCC...TAAACCCAAGATCCTGGCTAATGAAAAAGTCATTACTGTGCTTGCTGCCTGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CAA 90 bp TGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGGCTTTCAAAGCATGTTTCATGAAGGTGCCACCGTaGTTTCTGAGGTGGAGAGAG +
Preference number: 5 (lower is better)
Translates to: CFICSMQLSIRLAFKACFMKVPP*FLRWRE
Trigger: CTCTCTCCACCTCAGAAACAACGGTGGCACCTTCAT...GAAACATGCTTTGAAAGCCAATCTTATAGACAATTGCATGGAGCAGATGAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CAA 90 bp CCCTTTACAAATAATGCACACTTACTTCTACATAGCCCTTTTCCAGTGTGGATGCTTCAGGTAGAAGTGTaGTTGACTGCACAAGTGGCT +
Preference number: 5 (lower is better)
Translates to: PFTNNAHLLLHSPFPVWMLQVEV*LTAQVA
Trigger: AGCCACTTGTGCAGTCAACAACACTTCTACCTGAAG...CATCCACACTGGAAAAGGGCTATGTAGAAGTAAGTGTGCATTATTTGTAAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640769.2
CDS-3UTR CAA 90 bp CCATCAAGCCTCAGAATCATTTGTTGCCCATCTTCTCCAGATGATATATTCAGGCAGCATAAATGTGTTTaGCTCTTAGCCTGGAGATGC +
Preference number: 5 (lower is better)
Translates to: PSSLRIICCPSSPDDIFRQHKCV*LLAWRC
Trigger: GCATCTCCAGGCTAAGAGCAAAACACATTTATGCTG...CCTGAATATATCATCTGGAGAAGATGGGCAACAAATGATTCTGAGGCTTGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TGCTTGTATTTGCTCATCTCTGTTAGTAAGTCTAGACAGCCATCAAGCCTCAGACAGCATAAATGTGTTTaGCTCTTAGCCTGGAGATGC +
Preference number: 5 (lower is better)
Translates to: CLYLLISVSKSRQPSSLRQHKCV*LLAWRC
Trigger: GCATCTCCAGGCTAAGAGCAAAACACATTTATGCTG...TCTGAGGCTTGATGGCTGTCTAGACTTACTAACAGAGATGAGCAAATACAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp ACTGGATCACCACATAAAACCTTCCTCAAGAGTGTGAGGCATGGTTGTACCAAAGTGACATCAATGCATTaGCAGCTACTCTTTTCAGGA +
Preference number: 5 (lower is better)
Translates to: TGSPHKTFLKSVRHGCTKVTSMH*QLLFSG
Trigger: TCCTGAAAAGAGTAGCTGCAAATGCATTGATGTCAC...TTTGGTACAACCATGCCTCACACTCTTGAGGAAGGTTTTATGTGGTGATCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581161.5
CDS-3UTR CAA 90 bp CAAGCTCATCCTGAATCACAAGGTCAGGCTCCACCAATAAACATGACTGCAGAAATCTGCTCCATGCAATaGTCTATAAGATTGGCTTTC +
Preference number: 5 (lower is better)
Translates to: QAHPESQGQAPPINMTAEICSMQ*SIRLAF
Trigger: GAAAGCCAATCTTATAGACAATTGCATGGAGCAGAT...TTCTGCAGTCATGTTTATTGGTGGAGCCTGACCTTGTGATTCAGGATGAGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CAA 90 bp AGAGGTAGCACGTCTTCAGGTAACAGCTGCTACACACAGCTGGCTTCAACTTTAGAGAACTGCAACCATTaGGAAAATTTGCAGTATAGA +
Preference number: 5 (lower is better)
Translates to: RGSTSSGNSCYTQLASTLENCNH*ENLQYR
Trigger: TCTATACTGCAAATTTTCCAAATGGTTGCAGTTCTC...TAAAGTTGAAGCCAGCTGTGTGTAGCAGCTGTTACCTGAAGACGTGCTACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
CDS-3UTR CAA 90 bp AGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACAGCTGCTGAGAACTGCAACCATTaGGAAAATTTGCAGTATAGA +
Preference number: 5 (lower is better)
Translates to: RRGSTLCREVARLQVTAAENCNH*ENLQYR
Trigger: TCTATACTGCAAATTTTCCAAATGGTTGCAGTTCTC...AGCAGCTGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
CDS-3UTR CAA 90 bp CTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAAGAGAACTGCAACCATTaGGAAAATTTGCAGTATAGA +
Preference number: 5 (lower is better)
Translates to: LHTAGFNFSSPVDDCQLQENCNH*ENLQYR
Trigger: TCTATACTGCAAATTTTCCAAATGGTTGCAGTTCTC...TTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
CDS-3UTR CAA 90 bp AAGCTGTTTTTGCCTTCTGATAATTGTAAATCAGAGCCCAAAGGGCAGCTGCTCAATAAAGGGCTGCTCTaGTGCTTGTATTTGCTCATC +
Preference number: 5 (lower is better)
Translates to: KLFLPSDNCKSEPKGQLLNKGLL*CLYLLI
Trigger: GATGAGCAAATACAAGCACAAGAGCAGCCCTTTATT...GAGCAGCTGCCCTTTGGGCTCTGATTTACAATTATCAGAAGGCAAAAACAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CTACACACAGCTGGCTTCAACTTTAGCTCCCCTGTTGATGACTGTCAGCTTCAATTGGGAAAGTTTTCTTaGCTAAGGAGTATGCTTCAT +
Preference number: 5 (lower is better)
Translates to: LHTAGFNFSSPVDDCQLQLGKFS*LRSMLH
Trigger: ATGAAGCATACTCCTTAGCAAAGAAAACTTTCCCAA...TTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGTTGAAGCCAGCTGTGTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp AAAAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGGGTTTGCTTCTGAGTTaGGGAAAGTTTTCTTTGCTA +
Preference number: 5 (lower is better)
Translates to: KRHRKLSAAITSGELPQLGLLLS*GKFSLL
Trigger: TAGCAAAGAAAACTTTCCCAAACTCAGAAGCAAACC...CAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp AAAAGGCACAGAAAGTTGTCAGCTGCTATTACTTCTGGAGAGCTGCCACAACTGTGCTGGAAATTACTTTaGTCTTGGGGAAAATATCCT +
Preference number: 5 (lower is better)
Translates to: KRHRKLSAAITSGELPQLCWKLL*SWGKYP
Trigger: AGGATATTTTCCCCAAGACAAAAGTAATTTCCAGCA...CAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGACAACTTTCTGTGCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255674.11
ENST00000640769.2
CDS-3UTR CAA 90 bp AGGTCAATGCTGTCATCATCAATCGTCCCTGAAGCAGGTATAACAGAATGGCCTTGCTGGAAATTACTTTaGTCTTGGGGAAAATATCCT +
Preference number: 5 (lower is better)
Translates to: RSMLSSSIVPEAGITEWPCWKLL*SWGKYP
Trigger: AGGATATTTTCCCCAAGACAAAAGTAATTTCCAGCA...AGGCCATTCTGTTATACCTGCTTCAGGGACGATTGATGATGACAGCATTGACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR CAA 90 bp TTAATAACCAGCTCTCTTCTGTCATCCAGTCTGAGTTCAATAGGTTTCTTCCCATACAGGTGCATTCAATaGAATAAACGGCCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: LITSSLLSSSLSSIGFFPYRCIQ*NKRPLQ
Trigger: CTGCAGAGGCCGTTTATTCAATTGAATGCACCTGTA...TGGGAAGAAACCTATTGAACTCAGACTGGATGACAGAAGAGAGCTGGTTATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR CAA 90 bp TTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAACAGTTCTTTCTGAAGTaGTTGCCTGACAGCAGTCCG +
Preference number: 5 (lower is better)
Translates to: LCSQNFLCLFNRKEKAQKQFFLK*LPDSSP
Trigger: CGGACTGCTGTCAGGCAACAACTTCAGAAAGAACTG...TTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TTGGTACATATGGTGAGAATTCCAATGATATTGGTGATAAGAGGTTTCACAAGCCAGTTCTTTCTGAAGTaGTTGCCTGACAGCAGTCCG +
Preference number: 5 (lower is better)
Translates to: LVHMVRIPMILVIRGFTSQFFLK*LPDSSP
Trigger: CGGACTGCTGTCAGGCAACAACTTCAGAAAGAACTG...GCTTGTGAAACCTCTTATCACCAATATCATTGGAATTCTCACCATATGTACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CAA 90 bp TGTGCTCTTCTACTGACAGCCAGCAGTGACATCAATGCATTTGCAGCTACTCTTGTAACTTCCATGAAATaGAGCAGCAAGGTATCAAAA +
Preference number: 5 (lower is better)
Translates to: CALLLTASSDINAFAATLVTSMK*SSKVSK
Trigger: TTTTGATACCTTGCTGCTCAATTTCATGGAAGTTAC...AAGAGTAGCTGCAAATGCATTGATGTCACTGCTGGCTGTCAGTAGAAGAGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CAA 90 bp CACTTACTTCTACATAGCCCTTTTCCAGTGTGGATGCTCTGGATAACAGAAAGTCAACCAAGCCAATCCTaGTTGAGTAGGAATATGTTC +
Preference number: 5 (lower is better)
Translates to: HLLLHSPFPVWMLWITESQPSQS*LSRNMF
Trigger: GAACATATTCCTACTCAACAAGGATTGGCTTGGTTG...ACTTTCTGTTATCCAGAGCATCCACACTGGAAAAGGGCTATGTAGAAGTAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640769.2
CDS-3UTR CAA 90 bp TATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAAGCAGGTAGAAGTGTTGTaGACTGCACAAGTGGCTGAA +
Preference number: 5 (lower is better)
Translates to: YVPRTFYAFSTERKRHRKQVEVL*TAQVAE
Trigger: TTCAGCCACTTGTGCAGTCAACAACACTTCTACCTG...CTTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp AGTTGTGCATTTATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGGCTGCAATCGTCAAGAGGTaGTCCAAGAGGCTGCACATT +
Preference number: 5 (lower is better)
Translates to: SCAFMCFICSMQLSIRLAAIVKR*SKRLHI
Trigger: AATGTGCAGCCTCTTGGACAACCTCTTGACGATTGC...AGCCAATCTTATAGACAATTGCATGGAGCAGATGAAACACATAAATGCACAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TCTTGTGCTTGTATTTGCTCATCTCTGTTAGTAAGTCTAGACAGCCATCAAGCCTTCTATGAGATGAGCTaGTCGAAAAGCCTTTGCAGT +
Preference number: 5 (lower is better)
Translates to: SCACICSSLLVSLDSHQAFYEMS*SKSLCS
Trigger: ACTGCAAAGGCTTTTCGACAAGCTCATCTCATAGAA...GGCTTGATGGCTGTCTAGACTTACTAACAGAGATGAGCAAATACAAGCACAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp AGACAGGCAGCAAGCACAGTAATGACTTTTTCATTAGCCAGGATCTTGGGTTTAGTGACATCAATGCATTaGCAGCTACTCTTTTCAGGA +
Preference number: 5 (lower is better)
Translates to: RQAASTVMTFSLARILGLVTSMH*QLLFSG
Trigger: TCCTGAAAAGAGTAGCTGCAAATGCATTGATGTCAC...TAAACCCAAGATCCTGGCTAATGAAAAAGTCATTACTGTGCTTGCTGCCTGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TGGGAAAGAAGGGGATCAACACTTTGTAGAGAGGTAGCACGTCTTCAGGTAACAGAGAACTGCAACCATTaGGAAAATTTGCAGTATAGA +
Preference number: 5 (lower is better)
Translates to: WERRGSTLCREVARLQVTENCNH*ENLQYR
Trigger: TCTATACTGCAAATTTTCCAAATGGTTGCAGTTCTC...TGTTACCTGAAGACGTGCTACCTCTCTACAAAGTGTTGATCCCCTTCTTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
CDS-3UTR CAA 90 bp TATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAAGTCCTCTATGTGTAGCTaGAACAGGGTGTTGTCCACA +
Preference number: 5 (lower is better)
Translates to: YVPRTFYAFSTERKRHRKSSMCS*NRVLST
Trigger: TGTGGACAACACCCTGTTCAAGCTACACATAGAGGA...CTTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp ACTGGATCACCACATAAAACCTTCCTCAAGAGTGTGAGGCATGGTTGTACCAAACTCTTGTGCTTGTATTaGCTCATCTCTGTTAGTAAG +
Preference number: 5 (lower is better)
Translates to: TGSPHKTFLKSVRHGCTKLLCLY*LISVSK
Trigger: CTTACTAACAGAGATGAGCAAATACAAGCACAAGAG...TTTGGTACAACCATGCCTCACACTCTTGAGGAAGGTTTTATGTGGTGATCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581161.5
CDS-3UTR CAA 90 bp AGCCTCAGAATCATTTGTTGCCCATCTTCTCCAGATGATATATTCAGGAGTAACTCATTAGCCAGGATCTaGGGTTTATTTGCAGGACTG +
Preference number: 5 (lower is better)
Translates to: SLRIICCPSSPDDIFRSNSLARI*GLFAGL
Trigger: CAGTCCTGCAAATAAACCCAAGATCCTGGCTAATGA...GTTACTCCTGAATATATCATCTGGAGAAGATGGGCAACAAATGATTCTGAGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS CCA 90 bp ATACTTATGGGTATTTCTCTTGGGAACAACATGTCTGCAATAAAGTaGAAGTCCAAAGGCCAGAGAAAGAGTAGAACACAAATCTCCACG +
Preference number: 5 (lower is better)
Translates to: ILMGISLGNNMSAIK*KSKGQRKSRTQIST
Trigger: CGTGGAGATTTGTGTTCTACTCTTTCTCTGGCCTTTGGACTTCCACTTTATTGCAGACATGTTGTTCCCAAGAGAAATACCCATAAGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638799.1
ENST00000640525.1
CDS-3UTR CAA 90 bp AATGCACACTTACTTCTACATAGCCCTTTTCCAGTGTGGATGCTCTGGATAACAAGAGATTCAATAAACTaGTTCCAGGTCAATGCTGTC +
Preference number: 5 (lower is better)
Translates to: NAHLLLHSPFPVWMLWITRDSIN*FQVNAV
Trigger: GACAGCATTGACCTGGAACAAGTTTATTGAATCTCT...TGTTATCCAGAGCATCCACACTGGAAAAGGGCTATGTAGAAGTAAGTGTGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640769.2
CDS-3UTR CAA 90 bp GGTGAAGATTTCATATACCTTTTCAACAGTCTCCAACTTAATAACCAGCTCTCTTTCTTTCTGAAGTTGTaGCCTGACAGCAGTCCGGAT +
Preference number: 5 (lower is better)
Translates to: GEDFIYLFNSLQLNNQLSFFLKL*PDSSPD
Trigger: ATCCGGACTGCTGTCAGGCAACAACTTCAGAAAGAA...AGAGAGCTGGTTATTAAGTTGGAGACTGTTGAAAAGGTATATGAAATCTTCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000638251.1
CDS-3UTR CAA 90 bp GTACATATGGTGAGAATTCCAATGATATTGGTGATAAGAGGTTTCACAAGCTCACAGGTAGAAGTGTTGTaGACTGCACAAGTGGCTGAA +
Preference number: 5 (lower is better)
Translates to: VHMVRIPMILVIRGFTSSQVEVL*TAQVAE
Trigger: TTCAGCCACTTGTGCAGTCAACAACACTTCTACCTG...TGAGCTTGTGAAACCTCTTATCACCAATATCATTGGAATTCTCACCATATGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CAA 90 bp ATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGGCTTTCAAAGCATGTCTTCAGGTAGAAGTGTaGTTGACTGCACAAGTGGCT +
Preference number: 5 (lower is better)
Translates to: MCFICSMQLSIRLAFKACLQVEV*LTAQVA
Trigger: AGCCACTTGTGCAGTCAACAACACTTCTACCTGAAG...ACATGCTTTGAAAGCCAATCTTATAGACAATTGCATGGAGCAGATGAAACACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CAA 90 bp GTACATATGGTGAGAATTCCAATGATATTGGTGATAAGAGGTTTCACAAGCTCAACAAAAACACACAGTTaGGGCAGGGGAGCAGAAAGA +
Preference number: 5 (lower is better)
Translates to: VHMVRIPMILVIRGFTSSTKTHS*GRGAER
Trigger: TCTTTCTGCTCCCCTGCCCAAACTGTGTGTTTTTGT...TGAGCTTGTGAAACCTCTTATCACCAATATCATTGGAATTCTCACCATATGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CAA 90 bp TCTTGTGCTTGTATTTGCTCATCTCTGTTAGTAAGTCTAGACAGCCATCAAGCCATCTGCTCCATGCAATaGTCTATAAGATTGGCTTTC +
Preference number: 5 (lower is better)
Translates to: SCACICSSLLVSLDSHQAICSMQ*SIRLAF
Trigger: GAAAGCCAATCTTATAGACAATTGCATGGAGCAGAT...GGCTTGATGGCTGTCTAGACTTACTAACAGAGATGAGCAAATACAAGCACAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAATCCTCTATGTGTAGCTaGAACAGGGTGTTGTCCACA +
Preference number: 5 (lower is better)
Translates to: LCSQNFLCLFNRKEKAQKSSMCS*NRVLST
Trigger: TGTGGACAACACCCTGTTCAAGCTACACATAGAGGA...TTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp ATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGGCTTTCAAAGCATGTTCCTCTATGTGTAGCTaGAACAGGGTGTTGTCCACA +
Preference number: 5 (lower is better)
Translates to: MCFICSMQLSIRLAFKACSSMCS*NRVLST
Trigger: TGTGGACAACACCCTGTTCAAGCTACACATAGAGGA...ACATGCTTTGAAAGCCAATCTTATAGACAATTGCATGGAGCAGATGAAACACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp AATGCACACTTACTTCTACATAGCCCTTTTCCAGTGTGGATGCTCTGGATAACACTCTTGTGCTTGTATTaGCTCATCTCTGTTAGTAAG +
Preference number: 5 (lower is better)
Translates to: NAHLLLHSPFPVWMLWITLLCLY*LISVSK
Trigger: CTTACTAACAGAGATGAGCAAATACAAGCACAAGAG...TGTTATCCAGAGCATCCACACTGGAAAAGGGCTATGTAGAAGTAAGTGTGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578780.2
ENST00000639487.1
ENST00000640769.2
CDS-3UTR CAA 90 bp TTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAAACTTTAGCTCCCCTGTaGATGACTGTCAGCTTCAAG +
Preference number: 5 (lower is better)
Translates to: LCSQNFLCLFNRKEKAQKTLAPL*MTVSFK
Trigger: CTTGAAGCTGACAGTCATCAACAGGGGAGCTAAAGT...TTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAATGGGCTGAGCTAAATTaGAACCCAGGCTTATACAGC +
Preference number: 5 (lower is better)
Translates to: LCSQNFLCLFNRKEKAQKWAELN*NPGLYS
Trigger: GCTGTATAAGCCTGGGTTCAAATTTAGCTCAGCCCA...TTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578780.2
ENST00000639487.1
ENST00000640769.2
CDS-3UTR CAA 90 bp TTTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAATGGGCTGAGCTAAATTaGAACCCAGGCTTATACAGC +
Preference number: 5 (lower is better)
Translates to: FMFPELSMPFQQKGKGTEWAELN*NPGLYS
Trigger: GCTGTATAAGCCTGGGTTCAAATTTAGCTCAGCCCA...TTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578780.2
ENST00000639487.1
ENST00000640769.2
CDS-3UTR CAA 90 bp CTTTCTTCTTTATTACACAGCCTTGCAGAAGACAACGGTGAAGATTATACATGTGGTGATATCACCTTGTaGAGCTTGTCCAGTCTAACC +
Preference number: 5 (lower is better)
Translates to: LSSLLHSLAEDNGEDYTCGDITL*SLSSLT
Trigger: GGTTAGACTGGACAAGCTCAACAAGGTGATATCACC...ACATGTATAATCTTCACCGTTGTCTTCTGCAAGGCTGTGTAATAAAGAAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639487.1
CDS CCA 90 bp GCTGTAACTCTTGACACCTTTGGATGTATCCTAAGAGTTTATACCTaGGTTATACCTTGTTGTTTGCTCCCCAGGTGTAACAATGATTTT +
Preference number: 5 (lower is better)
Translates to: AVTLDTFGCILRVYT*VIPCCLLPRCNNDF
Trigger: AAAATCATTGTTACACCTGGGGAGCAAACAACAAGGTATAACCCAGGTATAAACTCTTAGGATACATCCAAAGGTGTCAAGAGTTACAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638799.1
ENST00000640525.1
CDS-3UTR CAA 90 bp AACACAGGGACCCTGCCAAGTATAATCCTTTATAATTTCTGTAGGCATTGGAATCTGATAAAAACTCGCTaGCCTTTTCAACAGGGAGAA +
Preference number: 5 (lower is better)
Translates to: NTGTLPSIILYNFCRHWNLIKTR*PFQQGE
Trigger: TTCTCCCTGTTGAAAAGGCAAGCGAGTTTTTATCAG...ATTCCAATGCCTACAGAAATTATAAAGGATTATACTTGGCAGGGTCCCTGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CAA 90 bp GTACATATGGTGAGAATTCCAATGATATTGGTGATAAGAGGTTTCACAAGCTCATACAGGTGCATTCAATaGAATAAACGGCCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: VHMVRIPMILVIRGFTSSYRCIQ*NKRPLQ
Trigger: CTGCAGAGGCCGTTTATTCAATTGAATGCACCTGTA...TGAGCTTGTGAAACCTCTTATCACCAATATCATTGGAATTCTCACCATATGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CAA 90 bp CAAGCCTCAGAATCATTTGTTGCCCATCTTCTCCAGATGATATATTCAGGAGTAAGAGATTCAATAAACTaGTTCCAGGTCAATGCTGTC +
Preference number: 5 (lower is better)
Translates to: QASESFVAHLLQMIYSGVRDSIN*FQVNAV
Trigger: GACAGCATTGACCTGGAACAAGTTTATTGAATCTCT...TACTCCTGAATATATCATCTGGAGAAGATGGGCAACAAATGATTCTGAGGCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581161.5
ENST00000583043.5
CDS-3UTR CAA 90 bp TTTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAGAGTGTGAGGCATGGTaGTACCAAACATTCTACAAC +
Preference number: 5 (lower is better)
Translates to: FMFPELSMPFQQKGKGTEECEAW*YQTFYN
Trigger: GTTGTAGAATGTTTGGTACAACCATGCCTCACACTC...TTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
CDS-3UTR CAA 90 bp AACACAGGGACCCTGCCAAGTATAATCCTTTATAATTTCTGTAGGCATTGGAATCCAAGCCAATCCTTGTaGAGTAGGAATATGTTCTTC +
Preference number: 5 (lower is better)
Translates to: NTGTLPSIILYNFCRHWNPSQSL*SRNMFF
Trigger: GAAGAACATATTCCTACTCAACAAGGATTGGCTTGG...ATTCCAATGCCTACAGAAATTATAAAGGATTATACTTGGCAGGGTCCCTGTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000583043.5
ENST00000638251.1
CDS-3UTR CAA 90 bp TTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAAGGAGCCCTCCAAAACTaGAATGAGTCATCTAAACCA +
Preference number: 5 (lower is better)
Translates to: LCSQNFLCLFNRKEKAQKGALQN*NESSKP
Trigger: TGGTTTAGATGACTCATTCAAGTTTTGGAGGGCTCC...TTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp AACAAAGAGAACTGCAACCATTTGGAAAATTTGCAGTATAGACACAAAGGAGCTGAGAACAGAAAGGAATaGCAAGCTGGCAGTATACAG +
Preference number: 5 (lower is better)
Translates to: NKENCNHLENLQYRHKGAENRKE*QAGSIQ
Trigger: CTGTATACTGCCAGCTTGCAATTCCTTTCTGTTCTC...AGCTCCTTTGTGTCTATACTGCAAATTTTCCAAATGGTTGCAGTTCTCTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
CDS-3UTR CAA 90 bp GGTGAAGATTTCATATACCTTTTCAACAGTCTCCAACTTAATAACCAGCTCTCTGAAGTGAAGCCACTGTaGGACTACAGCATAAATGTG +
Preference number: 5 (lower is better)
Translates to: GEDFIYLFNSLQLNNQLSEVKPL*DYSINV
Trigger: CACATTTATGCTGTAGTCCAACAGTGGCTTCACTTC...AGAGAGCTGGTTATTAAGTTGGAGACTGTTGAAAAGGTATATGAAATCTTCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581161.5
CDS-3UTR CAA 90 bp ATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGGCTTTCAAAGCATGTGAAGTGAAGCCACTGTaGGACTACAGCATAAATGTG +
Preference number: 5 (lower is better)
Translates to: MCFICSMQLSIRLAFKACEVKPL*DYSINV
Trigger: CACATTTATGCTGTAGTCCAACAGTGGCTTCACTTC...ACATGCTTTGAAAGCCAATCTTATAGACAATTGCATGGAGCAGATGAAACACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAATCATTAGCCAGGATCTaGGGTTTATTTGCAGGACTG +
Preference number: 5 (lower is better)
Translates to: LCSQNFLCLFNRKEKAQKSLARI*GLFAGL
Trigger: CAGTCCTGCAAATAAACCCAAGATCCTGGCTAATGA...TTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp GGCTTTTCAAAGCTGTTTTTGCCTTCTGATAATTGTAAATCAGAGCCCAAAGGGAAAAGGCACAGAAAGTaGTCAGCTGCTATTACTTCT +
Preference number: 5 (lower is better)
Translates to: GFSKLFLPSDNCKSEPKGKRHRK*SAAITS
Trigger: AGAAGTAATAGCAGCTGACAACTTTCTGTGCCTTTT...CCCTTTGGGCTCTGATTTACAATTATCAGAAGGCAAAAACAGCTTTGAAAAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp ACTTTCCAGACAGGCAGCAAGCACAGTAATGACTTTTTCATTAGCCAGGATCTTTTGGGAAAGTTTTCTTaGCTAAGGAGTATGCTTCAT +
Preference number: 5 (lower is better)
Translates to: TFQTGSKHSNDFFISQDLLGKFS*LRSMLH
Trigger: ATGAAGCATACTCCTTAGCAAAGAAAACTTTCCCAA...AAGATCCTGGCTAATGAAAAAGTCATTACTGTGCTTGCTGCCTGTCTGGAAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CCCTTTACAAATAATGCACACTTACTTCTACATAGCCCTTTTCCAGTGTGGATGGGTTTGCTTCTGAGTTaGGGAAAGTTTTCTTTGCTA +
Preference number: 5 (lower is better)
Translates to: PFTNNAHLLLHSPFPVWMGLLLS*GKFSLL
Trigger: TAGCAAAGAAAACTTTCCCAAACTCAGAAGCAAACC...CATCCACACTGGAAAAGGGCTATGTAGAAGTAAGTGTGCATTATTTGTAAAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578780.2
ENST00000639487.1
ENST00000640769.2
CDS TCA 90 bp GCCAAATGTGGGTACAACCCACATGTCCATCGACAAATGCATAGATaGATAAAATGTGGGATATACATGCAAAGGAATATTATTCAGCCA +
Preference number: 5 (lower is better)
Translates to: AKCGYNPHVHRQMHR*IKCGIYMQRNIIQP
Trigger: TGGCTGAATAATATTCCTTTGCATGTATATCCCACATTTTATTCATCTATGCATTTGTCGATGGACATGTGGGTTGTACCCACATTTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640654.1
CDS GCA 90 bp ACTATTATTCACTGGGTATTACCCAAAAGAATTGAAACCAGGCACTaGACAGATACTTGCATGCCAATGTTCACTGAAGCATTATTCACA +
Preference number: 5 (lower is better)
Translates to: TIIHWVLPKRIETRH*TDTCMPMFTEALFT
Trigger: TGTGAATAATGCTTCAGTGAACATTGGCATGCAAGTATCTGTGCAGTGCCTGGTTTCAATTCTTTTGGGTAATACCCAGTGAATAATAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640654.1
CDS-3UTR CAA 90 bp CCCTTTACAAATAATGCACACTTACTTCTACATAGCCCTTTTCCAGTGTGGATGTGCTGGAAATTACTTTaGTCTTGGGGAAAATATCCT +
Preference number: 5 (lower is better)
Translates to: PFTNNAHLLLHSPFPVWMCWKLL*SWGKYP
Trigger: AGGATATTTTCCCCAAGACAAAAGTAATTTCCAGCA...CATCCACACTGGAAAAGGGCTATGTAGAAGTAAGTGTGCATTATTTGTAAAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000640769.2
CDS-3UTR CAA 90 bp TTTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAACTTCTGTGTCAGAACTaGCTTTGCTTAGAAGGAGAA +
Preference number: 5 (lower is better)
Translates to: FMFPELSMPFQQKGKGTELLCQN*LCLEGE
Trigger: TTCTCCTTCTAAGCAAAGCAAGTTCTGACACAGAAG...TTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
CDS-3UTR CAA 90 bp TTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAACAACCAAGCCAATCCTaGTTGAGTAGGAATATGTTC +
Preference number: 5 (lower is better)
Translates to: LCSQNFLCLFNRKEKAQKQPSQS*LSRNMF
Trigger: GAACATATTCCTACTCAACAAGGATTGGCTTGGTTG...TTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000579986.6
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp ATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGGCTTTCAAAGCATGTCAACCAAGCCAATCCTaGTTGAGTAGGAATATGTTC +
Preference number: 5 (lower is better)
Translates to: MCFICSMQLSIRLAFKACQPSQS*LSRNMF
Trigger: GAACATATTCCTACTCAACAAGGATTGGCTTGGTTG...ACATGCTTTGAAAGCCAATCTTATAGACAATTGCATGGAGCAGATGAAACACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CAA 90 bp CCCTTTACAAATAATGCACACTTACTTCTACATAGCCCTTTTCCAGTGTGGATGGAGAACTGCAACCATTaGGAAAATTTGCAGTATAGA +
Preference number: 5 (lower is better)
Translates to: PFTNNAHLLLHSPFPVWMENCNH*ENLQYR
Trigger: TCTATACTGCAAATTTTCCAAATGGTTGCAGTTCTC...CATCCACACTGGAAAAGGGCTATGTAGAAGTAAGTGTGCATTATTTGTAAAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578780.2
ENST00000639487.1
ENST00000640769.2
CDS TCA 90 bp CTTCATATCTATACCAAAAAGGCTGCTGTCATCCCAGATATCTGTTaGAATTGCTTCACCAATAAGTGTCATATCCTCTGTAAGCAATTC +
Preference number: 5 (lower is better)
Translates to: LHIYTKKAAVIPDIC*NCFTNKCHILCKQF
Trigger: GAATTGCTTACAGAGGATATGACACTTATTGGTGAAGCAATTTCAACAGATATCTGGGATGACAGCAGCCTTTTTGGTATAGATATGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000581583.1
ENST00000583043.5
ENST00000638251.1
ENST00000640376.1
ENST00000640769.2
CDS TCA 90 bp TACTATTCCTTTAACATCGAGATCATTTTAACACTGATGAGATGCTaGGAACTGGCTTTGCTGGGTATCATAACACACTTCATTTTCCAG +
Preference number: 5 (lower is better)
Translates to: YYSFNIEIILTLMRC*ELALLGIITHFIFQ
Trigger: CTGGAAAATGAAGTGTGTTATGATACCCAGCAAAGCCAGTTCTCAGCATCTCATCAGTGTTAAAATGATCTCGATGTTAAAGGAATAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639487.1
CDS-3UTR CAA 90 bp TATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAAGGTAACTTCCATGAAATaGAGCAGCAAGGTATCAAAA +
Preference number: 5 (lower is better)
Translates to: YVPRTFYAFSTERKRHRKVTSMK*SSKVSK
Trigger: TTTTGATACCTTGCTGCTCAATTTCATGGAAGTTAC...CTTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TTCAGTTGTGCATTTATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGTTCTATGAGATGAGCTaGTCGAAAAGCCTTTGCAGT +
Preference number: 5 (lower is better)
Translates to: FSCAFMCFICSMQLSIRLFYEMS*SKSLCS
Trigger: ACTGCAAAGGCTTTTCGACAAGCTCATCTCATAGAA...CAATCTTATAGACAATTGCATGGAGCAGATGAAACACATAAATGCACAACTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp GGTGAAGATTTCATATACCTTTTCAACAGTCTCCAACTTAATAACCAGCTCTCTATCTGCTCCATGCAATaGTCTATAAGATTGGCTTTC +
Preference number: 5 (lower is better)
Translates to: GEDFIYLFNSLQLNNQLSICSMQ*SIRLAF
Trigger: GAAAGCCAATCTTATAGACAATTGCATGGAGCAGAT...AGAGAGCTGGTTATTAAGTTGGAGACTGTTGAAAAGGTATATGAAATCTTCACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581161.5
CDS-3UTR CAA 90 bp TTTTCTTTGCTAAGGAGTATGCTTCATCCACTCTTCTTTTTACTGATGGGCTTTATCTGCTCCATGCAATaGTCTATAAGATTGGCTTTC +
Preference number: 5 (lower is better)
Translates to: FSLLRSMLHPLFFLLMGFICSMQ*SIRLAF
Trigger: GAAAGCCAATCTTATAGACAATTGCATGGAGCAGAT...AAAGCCCATCAGTAAAAAGAAGAGTGGATGAAGCATACTCCTTAGCAAAGAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TTTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAATCTGCTCCATGCAATaGTCTATAAGATTGGCTTTC +
Preference number: 5 (lower is better)
Translates to: FMFPELSMPFQQKGKGTEICSMQ*SIRLAF
Trigger: GAAAGCCAATCTTATAGACAATTGCATGGAGCAGAT...TTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp GCATTTATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGGCTTTCAAAGTTTATTTCCTCCTTTaGGCAATGCTAGAGAGAGGA +
Preference number: 5 (lower is better)
Translates to: AFMCFICSMQLSIRLAFKVYFLL*AMLERG
Trigger: TCCTCTCTCTAGCATTGCCAAAAGGAGGAAATAAAC...TTTGAAAGCCAATCTTATAGACAATTGCATGGAGCAGATGAAACACATAAATGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp GCATTTATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGGCTTTCAAAAATAAAGGGCTGCTCTaGTGCTTGTATTTGCTCATC +
Preference number: 5 (lower is better)
Translates to: AFMCFICSMQLSIRLAFKNKGLL*CLYLLI
Trigger: GATGAGCAAATACAAGCACAAGAGCAGCCCTTTATT...TTTGAAAGCCAATCTTATAGACAATTGCATGGAGCAGATGAAACACATAAATGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TTTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAAAAAGGCACAGAAAGTaGTCAGCTGCTATTACTTCT +
Preference number: 5 (lower is better)
Translates to: FMFPELSMPFQQKGKGTEKRHRK*SAAITS
Trigger: AGAAGTAATAGCAGCTGACAACTTTCTGTGCCTTTT...TTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAAA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp ATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGGCTTTCAAAGCATGTAAAAGGCACAGAAAGTaGTCAGCTGCTATTACTTCT +
Preference number: 5 (lower is better)
Translates to: MCFICSMQLSIRLAFKACKRHRK*SAAITS
Trigger: AGAAGTAATAGCAGCTGACAACTTTCTGTGCCTTTT...ACATGCTTTGAAAGCCAATCTTATAGACAATTGCATGGAGCAGATGAAACACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp TATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAAGTTGGGAAAGTTTTCTTaGCTAAGGAGTATGCTTCAT +
Preference number: 5 (lower is better)
Translates to: YVPRTFYAFSTERKRHRKLGKFS*LRSMLH
Trigger: ATGAAGCATACTCCTTAGCAAAGAAAACTTTCCCAA...CTTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000578780.2
ENST00000579986.6
ENST00000583043.5
ENST00000639487.1
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS-3UTR CAA 90 bp GTACATATGGTGAGAATTCCAATGATATTGGTGATAAGAGGTTTCACAAGCTCAGGTTTGCTTCTGAGTTaGGGAAAGTTTTCTTTGCTA +
Preference number: 5 (lower is better)
Translates to: VHMVRIPMILVIRGFTSSGLLLS*GKFSLL
Trigger: TAGCAAAGAAAACTTTCCCAAACTCAGAAGCAAACC...TGAGCTTGTGAAACCTCTTATCACCAATATCATTGGAATTCTCACCATATGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000679113.1
CDS-3UTR CAA 90 bp AGTTGTGCATTTATGTGTTTCATCTGCTCCATGCAATTGTCTATAAGATTGGCTGGTTTGCTTCTGAGTTaGGGAAAGTTTTCTTTGCTA +
Preference number: 5 (lower is better)
Translates to: SCAFMCFICSMQLSIRLAGLLLS*GKFSLL
Trigger: TAGCAAAGAAAACTTTCCCAAACTCAGAAGCAAACC...AGCCAATCTTATAGACAATTGCATGGAGCAGATGAAACACATAAATGCACAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000579986.6
ENST00000581161.5
ENST00000583043.5
ENST00000639487.1
ENST00000679113.1
CDS-3UTR CAA 90 bp CTTTCTTCTTTATTACACAGCCTTGCAGAAGACAACGGTGAAGATTATACATGTGGTTTGCTTCTGAGTTaGGGAAAGTTTTCTTTGCTA +
Preference number: 5 (lower is better)
Translates to: LSSLLHSLAEDNGEDYTCGLLLS*GKFSLL
Trigger: TAGCAAAGAAAACTTTCCCAAACTCAGAAGCAAACC...ACATGTATAATCTTCACCGTTGTCTTCTGCAAGGCTGTGTAATAAAGAAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578780.2
ENST00000639487.1
ENST00000640769.2
CDS-3UTR CAA 90 bp TTATGTTCCCAGAACTTTCTATGCCTTTTCAACAGAAAGGAAAAGGCACAGAAAGTAACTTCCATGAAATaGAGCAGCAAGGTATCAAAA +
Preference number: 5 (lower is better)
Translates to: LCSQNFLCLFNRKEKAQKVTSMK*SSKVSK
Trigger: TTTTGATACCTTGCTGCTCAATTTCATGGAAGTTAC...TTTCTGTGCCTTTTCCTTTCTGTTGAAAAGGCATAGAAAGTTCTGGGAACATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000255674.11
ENST00000583043.5
ENST00000640769.2
ENST00000677824.1
ENST00000679113.1
CDS GCA 90 bp AACAGTCTCTTCAATGAATGGTACTCAGAAAACTGGATATCCATATaGAGAAAAATGAAACTAGATCTCTATCTCTCGCCACATATGAAA +
Preference number: 5 (lower is better)
Translates to: NSLFNEWYSENWISI*RKMKLDLYLSPHMK
Trigger: TTTCATATGTGGCGAGAGATAGAGATCTAGTTTCATTTTTCTGCATATGGATATCCAGTTTTCTGAGTACCATTCATTGAAGAGACTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640408.1
CDS GCA 72 bp CCCAGTCCTGGCCATCTCCTCTGGGTCGCTGGCCTGTaGGCCCAACCACAGAAGGCCGAGGGCTGCTGCTTC +
Preference number: 6 (lower is better)
Translates to: PSPGHLLWVAGL*AQPQKAEGCCF
Trigger: GAAGCAGCAGCCCTCGGCCTTCTGTGGTTGGGCGCACAGGCCAGCGACCCAGAGGAGATGGCCAGGACTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000581583.1
ENST00000583043.5
ENST00000638251.1
ENST00000640376.1
ENST00000640736.1
ENST00000640769.2
CDS CCA 72 bp GCTGCATCCCAGTCCTGGCCATCTCCTCTGGGTCGCTaGCCTGTGCGCCCAACCACAGAAGGCCGAGGGCTG +
Preference number: 6 (lower is better)
Translates to: AASQSWPSPLGR*PVRPTTEGRGL
Trigger: CAGCCCTCGGCCTTCTGTGGTTGGGCGCACAGGCCAGCGACCCAGAGGAGATGGCCAGGACTGGGATGCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000581583.1
ENST00000583043.5
ENST00000638251.1
ENST00000640376.1
ENST00000640736.1
ENST00000640769.2
CDS CCA 72 bp GCTAGCAGTCACCTAGAGGACGCTGCATCCCAGTCCTaGCCATCTCCTCTGGGTCGCTGGCCTGTGCGCCCA +
Preference number: 6 (lower is better)
Translates to: ASSHLEDAASQS*PSPLGRWPVRP
Trigger: TGGGCGCACAGGCCAGCGACCCAGAGGAGATGGCCAGGACTGGGATGCAGCGTCCTCTAGGTGACTGCTAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640736.1
CDS GCA 72 bp GCTGGCCTGTGCGCCCAACCACAGAAGGCCGAGGGCTaGTGCTTCCTGGGGAAGGATTCTGGGAATGATGAG +
Preference number: 6 (lower is better)
Translates to: AGLCAQPQKAEG*CFLGKDSGNDE
Trigger: CTCATCATTCCCAGAATCCTTCCCCAGGAAGCAGCAGCCCTCGGCCTTCTGTGGTTGGGCGCACAGGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000581583.1
ENST00000583043.5
ENST00000638251.1
ENST00000640376.1
ENST00000640736.1
ENST00000640769.2
CDS GCA 72 bp GATGAGCCCTGCCAGGACCATCTCGTCCCGTCAATCTaGAGCCGCCGGAGAATTAAACTGCCGCGCCACTGC +
Preference number: 6 (lower is better)
Translates to: DEPCQDHLVPSI*SRRRIKLPRHC
Trigger: GCAGTGGCGCGGCAGTTTAATTCTCCGGCGGCTGCAGATTGACGGGACGAGATGGTCCTGGCAGGGCTCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581583.1
CDS GCA 72 bp CTCGGCCAGCTGATGACCGAGTTTCCTGATGAGCCCTaGCAGGACCATCTCGTCCCGTCAATCTGCAGCCGC +
Preference number: 6 (lower is better)
Translates to: LGQLMTEFPDEP*QDHLVPSICSR
Trigger: GCGGCTGCAGATTGACGGGACGAGATGGTCCTGGCAGGGCTCATCAGGAAACTCGGTCATCAGCTGGCCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000581161.5
ENST00000581583.1
ENST00000640769.2
CDS CCA 72 bp CTACTACTTCCACTAGAGGACGCTGCATCCCAGTCCTaGCCATCTCCTCTGGGTCGCTGGCCTGTGCGCCCA +
Preference number: 6 (lower is better)
Translates to: LLLPLEDAASQS*PSPLGRWPVRP
Trigger: TGGGCGCACAGGCCAGCGACCCAGAGGAGATGGCCAGGACTGGGATGCAGCGTCCTCTAGTGGAAGTAGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000581583.1
ENST00000583043.5
ENST00000638251.1
ENST00000640376.1
ENST00000640769.2
CDS TCA 72 bp TGCCTCCTCAAGTGGGTCCCTGACGCTCGTGCCTCCTaGCTGGGAGACACCTCCCAACAGGTGTTGACAGAC +
Preference number: 6 (lower is better)
Translates to: CLLKWVPDARAS*LGDTSQQVLTD
Trigger: GTCTGTCAACACCTGTTGGGAGGTGTCTCCCAGTCAGGAGGCACGAGCGTCAGGGACCCACTTGAGGAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638799.1
CDS GCA 72 bp TCACTGCCTGCACAGCAGTCTGAAGTCGACCTGGGATaGTCGAGCTTGGTGGGGAGAGGGGTGTCCACCATT +
Preference number: 6 (lower is better)
Translates to: SLPAQQSEVDLG*SSLVGRGVSTI
Trigger: AATGGTGGACACCCCTCTCCCCACCAAGCTCGAGCATCCCAGGTCGACTTCAGACTGCTGTGCAGGCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638799.1
CDS CCA 72 bp ATAGATAAAACTCCCATCTCCCTGGGACAGAGCACCTaGGGGAAAGGGCGGCTGTGGGTGCAGCTTCAGCAG +
Preference number: 6 (lower is better)
Translates to: IDKTPISLGQST*GKGRLWVQLQQ
Trigger: CTGCTGAAGCTGCACCCACAGCCGCCCTTTCCCCCAGGTGCTCTGTCCCAGGGAGATGGGAGTTTTATCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638799.1
CDS CCA 72 bp AATTCTCACTGCCTGCACAGCAGTCTGAAGTCGACCTaGGATGCTCGAGCTTGGTGGGGAGAGGGGTGTCCA +
Preference number: 6 (lower is better)
Translates to: NSHCLHSSLKST*DARAWWGEGCP
Trigger: TGGACACCCCTCTCCCCACCAAGCTCGAGCATCCCAGGTCGACTTCAGACTGCTGTGCAGGCAGTGAGAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638799.1
CDS CAA 72 bp GCACAGCAGTCTGAAGTCGACCTGGGATGCTCGAGCTaGGTGGGGAGAGGGGTGTCCACCATTAATGAGGCT +
Preference number: 6 (lower is better)
Translates to: AQQSEVDLGCSS*VGRGVSTINEA
Trigger: AGCCTCATTAATGGTGGACACCCCTCTCCCCACCAAGCTCGAGCATCCCAGGTCGACTTCAGACTGCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638799.1
CDS CAA 90 bp GGGAAGTTCAAACTGGGCAGAGCCCACCACAGCTCAGCAAAGACGTaGTACCCAAACTGCCTCTCTAGATTCCTCCTCTCTGGGCAGGCC +
Preference number: 6 (lower is better)
Translates to: GKFKLGRAHHSSAKT*YPNCLSRFLLSGQA
Trigger: GGCCTGCCCAGAGAGGAGGAATCTAGAGAGGCAGTTTGGGTACAACGTCTTTGCTGAGCTGTGGTGGGCTCTGCCCAGTTTGAACTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638799.1
CDS GCA 72 bp GCCCACCACAGCTCAGCAAAGACGTTGTACCCAAACTaGCTCTCTAGATTCCTCCTCTCTGGGCAGGCCATC +
Preference number: 6 (lower is better)
Translates to: AHHSSAKTLYPN*LSRFLLSGQAI
Trigger: GATGGCCTGCCCAGAGAGGAGGAATCTAGAGAGGCAGTTTGGGTACAACGTCTTTGCTGAGCTGTGGTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638799.1
CDS CCA 72 bp CACAGCAGTCTGAAGTCGACCTGGGATGCTCGAGCTTaGTGGGGAGAGGGGTGTCCACCATTAATGAGGCTT +
Preference number: 6 (lower is better)
Translates to: HSSLKSTWDARA*WGEGCPPLMRL
Trigger: AAGCCTCATTAATGGTGGACACCCCTCTCCCCACCAAGCTCGAGCATCCCAGGTCGACTTCAGACTGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638799.1
CDS GCA 72 bp TCCTTCTGGGTGCTCCCACTTAGCTTCCCACCAACATaGTCTATAAGGAAGTGGTGGAAAGCACTGCCCCCG +
Preference number: 6 (lower is better)
Translates to: SFWVLPLSFPPT*SIRKWWKALPP
Trigger: CGGGGGCAGTGCTTTCCACCACTTCCTTATAGAGCATGTTGGTGGGAAGCTAAGTGGGAGCACCCAGAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579021.1
CDS GCA 72 bp GGCTGTGGGTGCAGCTTCAGCAGACTTAAATGTTCCTaGCTGCTGTCTCTGAAGAGAGCAGTGGACCTCCCA +
Preference number: 6 (lower is better)
Translates to: GCGCSFSRLKCS*LLSLKRAVDLP
Trigger: TGGGAGGTCCACTGCTCTCTTCAGAGACAGCAGGCAGGAACATTTAAGTCTGCTGAAGCTGCACCCACAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638799.1
CDS CCA 72 bp ACAGACACATCATACAGGAGAGCTCTAGCTGGCATCTaGGGGGTGCCCTCTGGGATGAAGCTTCCAGAGGAA +
Preference number: 6 (lower is better)
Translates to: TDTSYRRALAGI*GVPSGMKLPEE
Trigger: TTCCTCTGGAAGCTTCATCCCAGAGGGCACCCCCCAGATGCCAGCTAGAGCTCTCCTGTATGATGTGTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638799.1
CDS CCA 72 bp GTAGCCTGTTTCCCTTCACAGTGCAAACGAAGGCACTaGGAAGTTCAAACTGGGCAGAGCCCACCACAGCTC +
Preference number: 6 (lower is better)
Translates to: VACFPSQCKRRH*EVQTGQSPPQL
Trigger: GAGCTGTGGTGGGCTCTGCCCAGTTTGAACTTCCCAGTGCCTTCGTTTGCACTGTGAAGGGAAACAGGCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638799.1
CDS CCA 72 bp AGCAGTCTGAAGTCGACCTGGGATGCTCGAGCTTGGTaGGGAGAGGGGTGTCCACCATTAATGAGGCTTAAG +
Preference number: 6 (lower is better)
Translates to: SSLKSTWDARAW*GEGCPPLMRLK
Trigger: CTTAAGCCTCATTAATGGTGGACACCCCTCTCCCCACCAAGCTCGAGCATCCCAGGTCGACTTCAGACTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638799.1
CDS TCA 72 bp GCAGGGAGAAAACTAGCCCCGGCAGAGACAGTCAGCTaGGAGAACACCATTCTAGGATGGCTGTCTATCCTA +
Preference number: 6 (lower is better)
Translates to: AGRKLAPAETVS*ENTILGWLSIL
Trigger: TAGGATAGACAGCCATCCTAGAATGGTGTTCTCTCAGCTGACTGTCTCTGCCGGGGCTAGTTTTCTCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638799.1
ENST00000640525.1
CDS GCA 72 bp TGCTGCAGGCAGGACACCGACTGTAATGCCAGGCGATaGTTTCCATCTCCAAAGGCCAGTTTCAACAGAGAT +
Preference number: 6 (lower is better)
Translates to: CCRQDTDCNARR*FPSPKASFNRD
Trigger: ATCTCTGTTGAAACTGGCCTTTGGAGATGGAAAGCATCGCCTGGCATTACAGTCGGTGTCCTGCCTGCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000581583.1
ENST00000583043.5
ENST00000638251.1
ENST00000640376.1
ENST00000640654.1
ENST00000640736.1
ENST00000640769.2
CDS GCA 72 bp ATGAAGCTTCCAGAGGAAGGAGCAGGCAGCAATCTTTaGTCTTCTGTAGCCTCTGCTGGTGATACCCAGGCA +
Preference number: 6 (lower is better)
Translates to: MKLPEEGAGSNL*SSVASAGDTQA
Trigger: TGCCTGGGTATCACCAGCAGAGGCTACAGAAGAGCAAAGATTGCTGCCTGCTCCTTCCTCTGGAAGCTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638799.1
CDS CCA 72 bp CTTAGCTTCCCACCAACATGCTCTATAAGGAAGTGGTaGAAAGCACTGCCCCCGCTCTGCTCTCACATATGC +
Preference number: 6 (lower is better)
Translates to: LSFPPTCSIRKW*KALPPLCSHIC
Trigger: GCATATGTGAGAGCAGAGCGGGGGCAGTGCTTTCCACCACTTCCTTATAGAGCATGTTGGTGGGAAGCTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579021.1
CDS CCA 72 bp CCACTTAGCTTCCCACCAACATGCTCTATAAGGAAGTaGTGGAAAGCACTGCCCCCGCTCTGCTCTCACATA +
Preference number: 6 (lower is better)
Translates to: PLSFPPTCSIRK*WKALPPLCSHI
Trigger: TATGTGAGAGCAGAGCGGGGGCAGTGCTTTCCACCACTTCCTTATAGAGCATGTTGGTGGGAAGCTAAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579021.1
CDS CCA 72 bp TTCACAGTGCAAACGAAGGCACTGGGAAGTTCAAACTaGGCAGAGCCCACCACAGCTCAGCAAAGACGTTGT +
Preference number: 6 (lower is better)
Translates to: FTVQTKALGSSN*AEPTTAQQRRC
Trigger: ACAACGTCTTTGCTGAGCTGTGGTGGGCTCTGCCCAGTTTGAACTTCCCAGTGCCTTCGTTTGCACTGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638799.1
CDS CCA 72 bp TTCCAACTGAGGTACCCAGCTCATCTCAGTAGTGCCTaGAATGCCAGTGAGACAGAGTTGTTCAGTCCCCTG +
Preference number: 6 (lower is better)
Translates to: FQLRYPAHLSSA*NASETELFSPL
Trigger: CAGGGGACTGAACAACTCTGTCTCACTGGCATTCCAGGCACTACTGAGATGAGCTGGGTACCTCAGTTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638799.1
CDS CAA 90 bp TGGAAGTCCAAAGGCCAGAGAAAGAGTAGAACACAAATCTCCACGTaGCCTGCCCTTTTCTCAGAGCAGGCTTTGGGCTGCAGTCGTACA +
Preference number: 6 (lower is better)
Translates to: WKSKGQRKSRTQIST*PALFSEQALGCSRT
Trigger: TGTACGACTGCAGCCCAAAGCCTGCTCTGAGAAAAGGGCAGGCAACGTGGAGATTTGTGTTCTACTCTTTCTCTGGCCTTTGGACTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638799.1
ENST00000640525.1
CDS TCA 72 bp CCTGCTCAACAACACAGACCCGATAAACCAGTCAAATaGGATGTCCCGCTAGGTCACCTGACACACCTCACT +
Preference number: 6 (lower is better)
Translates to: PAQQHRPDKPVK*DVPLGHLTHLT
Trigger: AGTGAGGTGTGTCAGGTGACCTAGCGGGACATCTCATTTGACTGGTTTATCGGGTCTGTGTTGTTGAGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638251.1
CDS GCA 72 bp ACGTTGCCTGCCCTTTTCTCAGAGCAGGCTTTGGGCTaGAGTCGTACAAGAACTGAGCTAGATAAAGGGGAA +
Preference number: 6 (lower is better)
Translates to: TLPALFSEQALG*SRTRTELDKGE
Trigger: TTCCCCTTTATCTAGCTCAGTTCTTGTACGACTGCAGCCCAAAGCCTGCTCTGAGAAAAGGGCAGGCAACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638799.1
ENST00000640525.1
CDS CAA 72 bp ATCTCCACGTTGCCTGCCCTTTTCTCAGAGCAGGCTTaGGGCTGCAGTCGTACAAGAACTGAGCTAGATAAA +
Preference number: 6 (lower is better)
Translates to: ISTLPALFSEQA*GCSRTRTELDK
Trigger: TTTATCTAGCTCAGTTCTTGTACGACTGCAGCCCAAAGCCTGCTCTGAGAAAAGGGCAGGCAACGTGGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638799.1
ENST00000640525.1
CDS CAA 90 bp TCCCTTGAGCCACAAACTGGTCATGGGAGGCTTCAGGTAGAAGTGTaGTTGACTGCACAAGTGGCTGAAATTCAGTACTCCCCAATGAAG +
Preference number: 6 (lower is better)
Translates to: SLEPQTGHGRLQVEV*LTAQVAEIQYSPMK
Trigger: CTTCATTGGGGAGTACTGAATTTCAGCCACTTGTGCAGTCAACAACACTTCTACCTGAAGCCTCCCATGACCAGTTTGTGGCTCAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640931.1
CDS CAA 90 bp AGAACACAAATCTCCACGTTGCCTGCCCTTTTCTCAGAGCAGGCTTaGGGCTGCAGTCGTACAAGAACTGAGCTAGATAAAGGGGAATTG +
Preference number: 6 (lower is better)
Translates to: RTQISTLPALFSEQA*GCSRTRTELDKGEL
Trigger: CAATTCCCCTTTATCTAGCTCAGTTCTTGTACGACTGCAGCCCAAAGCCTGCTCTGAGAAAAGGGCAGGCAACGTGGAGATTTGTGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638799.1
ENST00000640525.1
CDS GCA 72 bp AAGTTAAGTCTGTTTCTTAAATACATGCACAGCTGCTaGAGGCAGGACACCGACTGTAATGCCAGGCGATGC +
Preference number: 6 (lower is better)
Translates to: KLSLFLKYMHSC*RQDTDCNARRC
Trigger: GCATCGCCTGGCATTACAGTCGGTGTCCTGCCTGCAGCAGCTGTGCATGTATTTAAGAAACAGACTTAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000581583.1
ENST00000583043.5
ENST00000638251.1
ENST00000640376.1
ENST00000640654.1
ENST00000640736.1
ENST00000640769.2
CDS GCA 72 bp TCTATAAGGAAGTGGTGGAAAGCACTGCCCCCGCTCTaGTCTCACATATGCAGAATCTCTCATTCTTATGGA +
Preference number: 6 (lower is better)
Translates to: SIRKWWKALPPL*SHICRISHSYG
Trigger: TCCATAAGAATGAGAGATTCTGCATATGTGAGAGCAGAGCGGGGGCAGTGCTTTCCACCACTTCCTTATAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579021.1
CDS TCA 72 bp CAGCTCTGGCAGATCTATGTGTCCCATATCCAAAGGTaGATGAACGGATATCCTGGAGTTTACATGAGCATG +
Preference number: 6 (lower is better)
Translates to: QLWQIYVSHIQR*MNGYPGVYMSM
Trigger: CATGCTCATGTAAACTCCAGGATATCCGTTCATTCACCTTTGGATATGGGACACATAGATCTGCCAGAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000581583.1
ENST00000583043.5
ENST00000638251.1
ENST00000640376.1
ENST00000640769.2
CDS TCA 72 bp TGTGGTGCACAAGCATCACCTCTGGCTGCTCCAAACTaGTACTACTTTTATGGTAGCACATGGTTTCTCCAA +
Preference number: 6 (lower is better)
Translates to: CGAQASPLAAPN*YYFYGSTWFLQ
Trigger: TTGGAGAAACCATGTGCTACCATAAAAGTAGTATCAGTTTGGAGCAGCCAGAGGTGATGCTTGTGCACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000581583.1
ENST00000583043.5
ENST00000638251.1
ENST00000640376.1
ENST00000640769.2
CDS TCA 72 bp CAGGCACTGCACAGATACTTGCATGCCAATGTTCACTaGAGCATTATTCACAACCGCCAAATGTGGGTACAA +
Preference number: 6 (lower is better)
Translates to: QALHRYLHANVH*SIIHNRQMWVQ
Trigger: TTGTACCCACATTTGGCGGTTGTGAATAATGCTTCAGTGAACATTGGCATGCAAGTATCTGTGCAGTGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640654.1
CDS CCA 72 bp GATAAAGGCCATTCTGTGGTGCACAAGCATCACCTCTaGCTGCTCCAAACTGATACTACTTTTATGGTAGCA +
Preference number: 6 (lower is better)
Translates to: DKGHSVVHKHHL*LLQTDTTFMVA
Trigger: TGCTACCATAAAAGTAGTATCAGTTTGGAGCAGCCAGAGGTGATGCTTGTGCACCACAGAATGGCCTTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000581583.1
ENST00000583043.5
ENST00000638251.1
ENST00000640376.1
ENST00000640769.2
CDS CAA 72 bp CCGCTAGGTCACCTGACACACCTCACTTTCGGGCTCTaGAATGCCAAATACAGAGATTTCATACAGAACTTT +
Preference number: 6 (lower is better)
Translates to: PLGHLTHLTFGL*NAKYRDFIQNF
Trigger: AAAGTTCTGTATGAAATCTCTGTATTTGGCATTCAAGAGCCCGAAAGTGAGGTGTGTCAGGTGACCTAGCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638251.1
CDS CCA 72 bp GATAAGAACTCTACTGCACCAACGTCAACCAAATGTTaGACTGCTGGGGGATACTTAACCAATCTGCTTAAC +
Preference number: 6 (lower is better)
Translates to: DKNSTAPTSTKC*TAGGYLTNLLN
Trigger: GTTAAGCAGATTGGTTAAGTATCCCCCAGCAGTCCAACATTTGGTTGACGTTGGTGCAGTAGAGTTCTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000581583.1
ENST00000638251.1
ENST00000640736.1
ENST00000640769.2
CDS CCA 72 bp GAGTTTGACGAAGTGACAGAAGCAGGCTTCAGAAGGTaGGTAATAACAAACTCCTCCAAGCTAAAGAAGCAT +
Preference number: 6 (lower is better)
Translates to: EFDEVTEAGFRR*VITNSSKLKKH
Trigger: ATGCTTCTTTAGCTTGGAGGAGTTTGTTATTACCCACCTTCTGAAGCCTGCTTCTGTCACTTCGTCAAACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638799.1
CDS CAA 90 bp AGGTTCATCTTGTTCTTTCCTCGTCCAAGCTCTAAAATTGGATATTaGTTCCAAAGTGTCGATTCCCTTGAGCCACAAACTGGTCATGGG +
Preference number: 6 (lower is better)
Translates to: RFILFFPRPSSKIGY*FQSVDSLEPQTGHG
Trigger: CCCATGACCAGTTTGTGGCTCAAGGGAATCGACACTTTGGAACAAATATCCAATTTTAGAGCTTGGACGAGGAAAGAACAAGATGAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640931.1
CDS GCA 72 bp AGGTCACCTGACACACCTCACTTTCGGGCTCTTGAATaGCAAATACAGAGATTTCATACAGAACTTTTGGAT +
Preference number: 6 (lower is better)
Translates to: RSPDTPHFRALE*QIQRFHTELLD
Trigger: ATCCAAAAGTTCTGTATGAAATCTCTGTATTTGGCATTCAAGAGCCCGAAAGTGAGGTGTGTCAGGTGACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638251.1
CDS GCA 72 bp AAAGAATTGAAACCAGGCACTGCACAGATACTTGCATaGCAATGTTCACTGAAGCATTATTCACAACCGCCA +
Preference number: 6 (lower is better)
Translates to: KELKPGTAQILA*QCSLKHYSQPP
Trigger: TGGCGGTTGTGAATAATGCTTCAGTGAACATTGGCATGCAAGTATCTGTGCAGTGCCTGGTTTCAATTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640654.1
CDS GCA 72 bp CCCAAAAGAATTGAAACCAGGCACTGCACAGATACTTaGATGCCAATGTTCACTGAAGCATTATTCACAACC +
Preference number: 6 (lower is better)
Translates to: PKRIETRHCTDT*MPMFTEALFTT
Trigger: GGTTGTGAATAATGCTTCAGTGAACATTGGCATGCAAGTATCTGTGCAGTGCCTGGTTTCAATTCTTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640654.1
CDS CCA 72 bp CTTGACACCTTTGGATGTATCCTAAGAGTTTATACCTaGGTTATACCTTGTTGTTTGCTCCCCAGGTGTAAC +
Preference number: 6 (lower is better)
Translates to: LDTFGCILRVYT*VIPCCLLPRCN
Trigger: GTTACACCTGGGGAGCAAACAACAAGGTATAACCCAGGTATAAACTCTTAGGATACATCCAAAGGTGTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638799.1
ENST00000640525.1
CDS CAA 90 bp GATGTTCCAGGTTCATCTTGTTCTTTCCTCGTCCAAGCTCTAAAATaGGATATTTGTTCCAAAGTGTCGATTCCCTTGAGCCACAAACTG +
Preference number: 6 (lower is better)
Translates to: DVPGSSCSFLVQALK*DICSKVSIPLSHKL
Trigger: CAGTTTGTGGCTCAAGGGAATCGACACTTTGGAACAAATATCCAATTTTAGAGCTTGGACGAGGAAAGAACAAGATGAACCTGGAACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640931.1
CDS CAA 90 bp GACGCAGCAATTTCACTATTATTCACTGGGTATTACCCAAAAGAATaGAAACCAGGCACTGCACAGATACTTGCATGCCAATGTTCACTG +
Preference number: 6 (lower is better)
Translates to: DAAISLLFTGYYPKE*KPGTAQILACQCSL
Trigger: CAGTGAACATTGGCATGCAAGTATCTGTGCAGTGCCTGGTTTCAATTCTTTTGGGTAATACCCAGTGAATAATAGTGAAATTGCTGCGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640654.1
CDS GCA 72 bp GATACTTATGGGTATTTCTCTTGGGAACAACATGTCTaGAATAAAGTGGAAGTCCAAAGGCCAGAGAAAGAG +
Preference number: 6 (lower is better)
Translates to: DTYGYFSWEQHV*NKVEVQRPEKE
Trigger: CTCTTTCTCTGGCCTTTGGACTTCCACTTTATTGCAGACATGTTGTTCCCAAGAGAAATACCCATAAGTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638799.1
ENST00000640525.1
CDS CCA 72 bp GGTATTTCTCTTGGGAACAACATGTCTGCAATAAAGTaGAAGTCCAAAGGCCAGAGAAAGAGTAGAACACAA +
Preference number: 6 (lower is better)
Translates to: GISLGNNMSAIK*KSKGQRKSRTQ
Trigger: TTGTGTTCTACTCTTTCTCTGGCCTTTGGACTTCCACTTTATTGCAGACATGTTGTTCCCAAGAGAAATACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638799.1
ENST00000640525.1
CDS CAA 72 bp GGTTCATCTTGTTCTTTCCTCGTCCAAGCTCTAAAATaGGATATTTGTTCCAAAGTGTCGATTCCCTTGAGC +
Preference number: 6 (lower is better)
Translates to: GSSCSFLVQALK*DICSKVSIPLS
Trigger: GCTCAAGGGAATCGACACTTTGGAACAAATATCCAATTTTAGAGCTTGGACGAGGAAAGAACAAGATGAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640931.1
CDS CAA 72 bp CATCTTAGCATAATACATCCTATTGAGCCAATCCCCTaGCACATTCTGAAGTCTTGCCCATATCCTCTTATC +
Preference number: 6 (lower is better)
Translates to: HLSIIHPIEPIP*HILKSCPYPLI
Trigger: GATAAGAGGATATGGGCAAGACTTCAGAATGTGCAAGGGGATTGGCTCAATAGGATGTATTATGCTAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638799.1
ENST00000640525.1
CDS GCA 72 bp GGAGTAGTTTCTCCTTCATATCTATACCAAAAAGGCTaGTGTCATCCCAGATATCTGTTGAAATTGCTTCAC +
Preference number: 6 (lower is better)
Translates to: GVVSPSYLYQKG*CHPRYLLKLLH
Trigger: GTGAAGCAATTTCAACAGATATCTGGGATGACAGCAGCCTTTTTGGTATAGATATGAAGGAGAAACTACTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000255674.11
ENST00000581161.5
ENST00000581583.1
ENST00000583043.5
ENST00000638251.1
ENST00000640376.1
ENST00000640769.2
CDS TCA 72 bp TTTCACTATTATTCACTGGGTATTACCCAAAAGAATTaGAACCAGGCACTGCACAGATACTTGCATGCCAAT +
Preference number: 6 (lower is better)
Translates to: FHYYSLGITQKN*NQALHRYLHAN
Trigger: ATTGGCATGCAAGTATCTGTGCAGTGCCTGGTTTCAATTCTTTTGGGTAATACCCAGTGAATAATAGTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640654.1
CDS TCA 72 bp TTTAACATCGAGATCATTTTAACACTGATGAGATGCTaGGAACTGGCTTTGCTGGGTATCATAACACACTTC +
Preference number: 6 (lower is better)
Translates to: FNIEIILTLMRC*ELALLGIITHF
Trigger: GAAGTGTGTTATGATACCCAGCAAAGCCAGTTCTCAGCATCTCATCAGTGTTAAAATGATCTCGATGTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639487.1
CDS CAA 72 bp ATAAACAGAGCATATGTTCAAGTACTGAGCACTGAGTaGCGATGTAATATTTATCTGTCCTTACCGTGGATC +
Preference number: 6 (lower is better)
Translates to: INRAYVQVLSTE*RCNIYLSLPWI
Trigger: GATCCACGGTAAGGACAGATAAATATTACATCGCAACTCAGTGCTCAGTACTTGAACATATGCTCTGTTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640736.1
CDS CAA 90 bp GATCCAACAATCCCACTGCTGGGTATATATCCAAAAGAAAGGAAATaGGTATGTCAAAGAGATATATGCACTCCCATGTTTATTGTAGCA +
Preference number: 6 (lower is better)
Translates to: DPTIPLLGIYPKERK*VCQRDICTPMFIVA
Trigger: TGCTACAATAAACATGGGAGTGCATATATCTCTTTGACATACCAATTTCCTTTCTTTTGGATATATACCCAGCAGTGGGATTGTTGGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640408.1
CDS CAA 90 bp TTCTTTTCATCTCCTCTAAACTCCCCAGAACACTTAAATCCTTTCTaGAGGACTTACCACATTCTATGCTATATTAGAGTTGTTGTGGAG +
Preference number: 6 (lower is better)
Translates to: FFSSPLNSPEHLNPF*RTYHILCYIRVVVE
Trigger: CTCCACAACAACTCTAATATAGCATAGAATGTGGTAAGTCCTCAAGAAAGGATTTAAGTGTTCTGGGGAGTTTAGAGGAGATGAAAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640408.1
CDS TCA 72 bp GGGTACAACCCACATGTCCATCGACAAATGCATAGATaGATAAAATGTGGGATATACATGCAAAGGAATATT +
Preference number: 6 (lower is better)
Translates to: GYNPHVHRQMHR*IKCGIYMQRNI
Trigger: AATATTCCTTTGCATGTATATCCCACATTTTATTCATCTATGCATTTGTCGATGGACATGTGGGTTGTACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640654.1
CDS CCA 72 bp AAACAGAACCTACATATGATCCAACAATCCCACTGCTaGGTATATATCCAAAAGAAAGGAAATTGGTATGTC +
Preference number: 6 (lower is better)
Translates to: KQNLHMIQQSHC*VYIQKKGNWYV
Trigger: GACATACCAATTTCCTTTCTTTTGGATATATACCCAGCAGTGGGATTGTTGGATCATATGTAGGTTCTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640408.1
CDS CAA 72 bp TCTCCTCTAAACTCCCCAGAACACTTAAATCCTTTCTaGAGGACTTACCACATTCTATGCTATATTAGAGTT +
Preference number: 6 (lower is better)
Translates to: SPLNSPEHLNPF*RTYHILCYIRV
Trigger: AACTCTAATATAGCATAGAATGTGGTAAGTCCTCAAGAAAGGATTTAAGTGTTCTGGGGAGTTTAGAGGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640408.1
CDS CAA 90 bp TATATATACATAAACAGAGCATATGTTCAAGTACTGAGCACTGAGTaGCGATGTAATATTTATCTGTCCTTACCGTGGATCATGGTCAAA +
Preference number: 6 (lower is better)
Translates to: YIYINRAYVQVLSTE*RCNIYLSLPWIMVK
Trigger: TTTGACCATGATCCACGGTAAGGACAGATAAATATTACATCGCAACTCAGTGCTCAGTACTTGAACATATGCTCTGTTTATGTATATATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640736.1
CDS TCA 72 bp AACAACATGGATGGAACTGGAAGTCATTACGTTAACTaGAATAATCCAGGCACAGAAAAACAAACATCACAT +
Preference number: 6 (lower is better)
Translates to: NNMDGTGSHYVN*NNPGTEKQTSH
Trigger: ATGTGATGTTTGTTTTTCTGTGCCTGGATTATTTCAGTTAACGTAATGACTTCCAGTTCCATCCATGTTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640408.1
CDS CCA 72 bp AACATAATTTGGGGAAAGAACAGTCTCTTCAATGAATaGTACTCAGAAAACTGGATATCCATATGCAGAAAA +
Preference number: 6 (lower is better)
Translates to: NIIWGKNSLFNE*YSENWISICRK
Trigger: TTTTCTGCATATGGATATCCAGTTTTCTGAGTACCATTCATTGAAGAGACTGTTCTTTCCCCAAATTATGTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640408.1