Pregenerated sensors for RTP3 (Homo sapiens)
Ensembl gene IDs: ENSG00000163825Ensembl transcript IDs: ENST00000296142.4, ENST00000684260.1
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GTCCTGGGACCTCAGCGGGATTCGGATTCCCATGTCCTTGCTCCATaGTCTTTACGTTCCGGCAGACAGCCAAGGCTGCCCACCCATGAG | + |
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Preference number: 5 (lower is better) Translates to: VLGPQRDSDSHVLAP*SLRSGRQPRLPTHE Trigger: CTCATGGGTGGGCAGCCTTGGCTGTCTGCCGGAACGTAAAGAGCATGGAGCAAGGACATGGGAATCCGAATCCCGCTGAGGTCCCAGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000684260.1 |
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| CDS TCA 90 bp | GCAATCACTGTTTGCCCAGGCGACAGGTACAAGGGCACAGGTCGGTaGGAGGCCATTAGCCCTAGGCAAACCCAGAGTCACTGCCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: AITVCPGDRYKGTGR*EAISPRQTQSHCPP Trigger: AGGAGGGCAGTGACTCTGGGTTTGCCTAGGGCTAATGGCCTCTCACCGACCTGTGCCCTTGTACCTGTCGCCTGGGCAAACAGTGATTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000684260.1 |
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| CDS GCA 90 bp | GAGCAGGAGGAGCACTGGAACCTGGCGAAGGTCCACTGCTGGTATTaGATCCAGCCTGGCTTCAGGACGTTGGGAAGAAGGCCCTTGTCT | + |
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Preference number: 5 (lower is better) Translates to: EQEEHWNLAKVHCWY*IQPGFRTLGRRPLS Trigger: AGACAAGGGCCTTCTTCCCAACGTCCTGAAGCCAGGCTGGATGCAATACCAGCAGTGGACCTTCGCCAGGTTCCAGTGCTCCTCCTGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296142.4 ENST00000684260.1 |
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| CDS CCA 90 bp | CGAAGGTCCACTGCTGGTATTGCATCCAGCCTGGCTTCAGGACGTTaGGAAGAAGGCCCTTGTCTGGTCTCAGGGTCCACCTGTGCCATG | + |
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Preference number: 5 (lower is better) Translates to: RRSTAGIASSLASGR*EEGPCLVSGSTCAM Trigger: CATGGCACAGGTGGACCCTGAGACCAGACAAGGGCCTTCTTCCCAACGTCCTGAAGCCAGGCTGGATGCAATACCAGCAGTGGACCTTCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296142.4 ENST00000684260.1 |
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| CDS CCA 90 bp | GCACTGGAACCTGGCGAAGGTCCACTGCTGGTATTGCATCCAGCCTaGCTTCAGGACGTTGGGAAGAAGGCCCTTGTCTGGTCTCAGGGT | + |
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Preference number: 5 (lower is better) Translates to: ALEPGEGPLLVLHPA*LQDVGKKALVWSQG Trigger: ACCCTGAGACCAGACAAGGGCCTTCTTCCCAACGTCCTGAAGCCAGGCTGGATGCAATACCAGCAGTGGACCTTCGCCAGGTTCCAGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296142.4 ENST00000684260.1 |
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| CDS CCA 90 bp | CAGAGGGCAAGGACTCAGACCTGCCCTCCCTTTGAGGACCTGGATTaGGCCCATGAACCATGTCTCTGCCCCAAGGACAAAGGTCAGTTG | + |
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Preference number: 5 (lower is better) Translates to: QRARTQTCPPFEDLD*AHEPCLCPKDKGQL Trigger: CAACTGACCTTTGTCCTTGGGGCAGAGACATGGTTCATGGGCCCAATCCAGGTCCTCAAAGGGAGGGCAGGTCTGAGTCCTTGCCCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000684260.1 |
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| CDS GCA 90 bp | TGCCCTCCCTTTGAGGACCTGGATTGGGCCCATGAACCATGTCTCTaGCCCAAGGACAAAGGTCAGTTGGCTCCAAGTTCAGAGGATGGC | + |
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Preference number: 5 (lower is better) Translates to: CPPFEDLDWAHEPCL*PKDKGQLAPSSEDG Trigger: GCCATCCTCTGAACTTGGAGCCAACTGACCTTTGTCCTTGGGGCAGAGACATGGTTCATGGGCCCAATCCAGGTCCTCAAAGGGAGGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000684260.1 |
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| CDS GCA 90 bp | GAGGCTTGTAACCTGTATGGGCCCAGCACAGAAGCCCTGCAGACATaGCTCACAGTTGTCACTATTGTGTGGCCCTTCAAGAGAGATGTC | + |
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Preference number: 5 (lower is better) Translates to: EACNLYGPSTEALQT*LTVVTIVWPFKRDV Trigger: GACATCTCTCTTGAAGGGCCACACAATAGTGACAACTGTGAGGCATGTCTGCAGGGCTTCTGTGCTGGGCCCATACAGGTTACAAGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296142.4 ENST00000684260.1 |
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| CDS CCA 90 bp | AACTCAGGGTCCTCAAACAGAGGTTGGGGGCACTTCTTACATCTCTaGGTAAACACCCTCATCTTCACCTGGCCCCTGGACTTCTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: NSGSSNRGWGHFLHL*VNTLIFTWPLDFSS Trigger: TGAGGAGAAGTCCAGGGGCCAGGTGAAGATGAGGGTGTTTACCCAGAGATGTAAGAAGTGCCCCCAACCTCTGTTTGAGGACCCTGAGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000296142.4 ENST00000684260.1 |
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| CDS CCA 90 bp | ATTGGGCCCATGAACCATGTCTCTGCCCCAAGGACAAAGGTCAGTTaGCTCCAAGTTCAGAGGATGGCACTAGGCTCCACAAGGAATTTC | + |
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Preference number: 5 (lower is better) Translates to: IGPMNHVSAPRTKVS*LQVQRMALGSTRNF Trigger: GAAATTCCTTGTGGAGCCTAGTGCCATCCTCTGAACTTGGAGCCAACTGACCTTTGTCCTTGGGGCAGAGACATGGTTCATGGGCCCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000684260.1 |
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| CDS TCA 90 bp | CCTACAGATGTGGTTTTGGCATGCGTAGGAATAGACATTCTCTCCTaGGGCCCAGGGCTTAACTACCTCCTCCACCTTGTAAATGGAGTG | + |
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Preference number: 5 (lower is better) Translates to: PTDVVLACVGIDILS*GPGLNYLLHLVNGV Trigger: CACTCCATTTACAAGGTGGAGGAGGTAGTTAAGCCCTGGGCCTCAGGAGAGAATGTCTATTCCTACGCATGCCAAAACCACATCTGTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000296142.4 ENST00000684260.1 |
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| CDS CCA 90 bp | CTTGAGATGTTCTCTTGTGTGAACTCAGGGTCCTCAAACAGAGGTTaGGGGCACTTCTTACATCTCTGGGTAAACACCCTCATCTTCACC | + |
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Preference number: 5 (lower is better) Translates to: LEMFSCVNSGSSNRG*GHFLHLWVNTLIFT Trigger: GGTGAAGATGAGGGTGTTTACCCAGAGATGTAAGAAGTGCCCCCAACCTCTGTTTGAGGACCCTGAGTTCACACAAGAGAACATCTCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000296142.4 ENST00000684260.1 |
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| CDS CCA 90 bp | AGCACAGAAGCCCTGCAGACATGCCTCACAGTTGTCACTATTGTGTaGCCCTTCAAGAGAGATGTCCTTGATCATAGGAACCTCCTCTAT | + |
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Preference number: 5 (lower is better) Translates to: STEALQTCLTVVTIV*PFKRDVLDHRNLLY Trigger: ATAGAGGAGGTTCCTATGATCAAGGACATCTCTCTTGAAGGGCCACACAATAGTGACAACTGTGAGGCATGTCTGCAGGGCTTCTGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296142.4 ENST00000684260.1 |
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| CDS GCA 72 bp | GGGCGGAGAGGCTCCTCACTTCTCAGACGGGGCGGTTaGCAGGCAGAGGGTCTCCTCACTTCTCAGATGGGG | + |
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Preference number: 6 (lower is better) Translates to: GRRGSSLLRRGG*QAEGLLTSQMG Trigger: CCCCATCTGAGAAGTGAGGAGACCCTCTGCCTGGCAACCGCCCCGTCTGAGAAGTGAGGAGCCTCTCCGCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000684260.1 |
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| CDS CAA 72 bp | CGGGCGGAGAGGCTCCTCACTTCTCAGACGGGGCGGTaGCCAGGCAGAGGGTCTCCTCACTTCTCAGATGGG | + |
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Preference number: 6 (lower is better) Translates to: RAERLLTSQTGR*PGRGSPHFSDG Trigger: CCCATCTGAGAAGTGAGGAGACCCTCTGCCTGGCAACCGCCCCGTCTGAGAAGTGAGGAGCCTCTCCGCCCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000684260.1 |
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| CDS GCA 72 bp | GTTCTCCATCCTCTGCTTCTTCCCAGACGGTGTGGCTaGCGGGCGGAGAGGCTCCTCACTTCTCAGACGGGG | + |
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Preference number: 6 (lower is better) Translates to: VLHPLLLPRRCG*RAERLLTSQTG Trigger: CCCCGTCTGAGAAGTGAGGAGCCTCTCCGCCCGGCAGCCACACCGTCTGGGAAGAAGCAGAGGATGGAGAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000684260.1 |
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| CDS CCA 72 bp | GCCTGGCTTCAGGACGTTGGGAAGAAGGCCCTTGTCTaGTCTCAGGGTCCACCTGTGCCATGGCTTCACCTC | + |
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Preference number: 6 (lower is better) Translates to: AWLQDVGKKALV*SQGPPVPWLHL Trigger: GAGGTGAAGCCATGGCACAGGTGGACCCTGAGACCAGACAAGGGCCTTCTTCCCAACGTCCTGAAGCCAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296142.4 ENST00000684260.1 |
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| CDS CAA 90 bp | TGGTATTGCATCCAGCCTGGCTTCAGGACGTTGGGAAGAAGGCCCTaGTCTGGTCTCAGGGTCCACCTGTGCCATGGCTTCACCTCCCGC | + |
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Preference number: 6 (lower is better) Translates to: WYCIQPGFRTLGRRP*SGLRVHLCHGFTSR Trigger: GCGGGAGGTGAAGCCATGGCACAGGTGGACCCTGAGACCAGACAAGGGCCTTCTTCCCAACGTCCTGAAGCCAGGCTGGATGCAATACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296142.4 ENST00000684260.1 |
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| CDS TCA 72 bp | GTTTGCCCAGGCGACAGGTACAAGGGCACAGGTCGGTaGGAGGCCATTAGCCCTAGGCAAACCCAGAGTCAC | + |
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Preference number: 6 (lower is better) Translates to: VCPGDRYKGTGR*EAISPRQTQSH Trigger: GTGACTCTGGGTTTGCCTAGGGCTAATGGCCTCTCACCGACCTGTGCCCTTGTACCTGTCGCCTGGGCAAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000684260.1 |
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| CDS GCA 72 bp | CCTCAGCGGGATTCGGATTCCCATGTCCTTGCTCCATaGTCTTTACGTTCCGGCAGACAGCCAAGGCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: PQRDSDSHVLAP*SLRSGRQPRLP Trigger: GGGCAGCCTTGGCTGTCTGCCGGAACGTAAAGAGCATGGAGCAAGGACATGGGAATCCGAATCCCGCTGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000684260.1 |
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| CDS CCA 72 bp | CCTGGCGAAGGTCCACTGCTGGTATTGCATCCAGCCTaGCTTCAGGACGTTGGGAAGAAGGCCCTTGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: PGEGPLLVLHPA*LQDVGKKALVW Trigger: CCAGACAAGGGCCTTCTTCCCAACGTCCTGAAGCCAGGCTGGATGCAATACCAGCAGTGGACCTTCGCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296142.4 ENST00000684260.1 |
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| CDS CAA 72 bp | ATCCAGCCTGGCTTCAGGACGTTGGGAAGAAGGCCCTaGTCTGGTCTCAGGGTCCACCTGTGCCATGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: IQPGFRTLGRRP*SGLRVHLCHGF Trigger: GAAGCCATGGCACAGGTGGACCCTGAGACCAGACAAGGGCCTTCTTCCCAACGTCCTGAAGCCAGGCTGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296142.4 ENST00000684260.1 |
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| CDS CAA 90 bp | GCGAAGGTCCACTGCTGGTATTGCATCCAGCCTGGCTTCAGGACGTaGGGAAGAAGGCCCTTGTCTGGTCTCAGGGTCCACCTGTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: AKVHCWYCIQPGFRT*GRRPLSGLRVHLCH Trigger: ATGGCACAGGTGGACCCTGAGACCAGACAAGGGCCTTCTTCCCAACGTCCTGAAGCCAGGCTGGATGCAATACCAGCAGTGGACCTTCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296142.4 ENST00000684260.1 |
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| CDS CAA 90 bp | ATGAAGTGGTCCTGGGACCTCAGCGGGATTCGGATTCCCATGTCCTaGCTCCATGCTCTTTACGTTCCGGCAGACAGCCAAGGCTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: MKWSWDLSGIRIPMS*LHALYVPADSQGCP Trigger: TGGGCAGCCTTGGCTGTCTGCCGGAACGTAAAGAGCATGGAGCAAGGACATGGGAATCCGAATCCCGCTGAGGTCCCAGGACCACTTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000684260.1 |
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| CDS GCA 72 bp | CCTGGGACCTCAGCGGGATTCGGATTCCCATGTCCTTaGTCCATGCTCTTTACGTTCCGGCAGACAGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: PGTSAGFGFPCP*SMLFTFRQTAK Trigger: CTTGGCTGTCTGCCGGAACGTAAAGAGCATGGAGCAAGGACATGGGAATCCGAATCCCGCTGAGGTCCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000684260.1 |
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| CDS CCA 72 bp | ACTGCTGGTATTGCATCCAGCCTGGCTTCAGGACGTTaGGAAGAAGGCCCTTGTCTGGTCTCAGGGTCCACC | + |
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Preference number: 6 (lower is better) Translates to: TAGIASSLASGR*EEGPCLVSGST Trigger: GGTGGACCCTGAGACCAGACAAGGGCCTTCTTCCCAACGTCCTGAAGCCAGGCTGGATGCAATACCAGCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296142.4 ENST00000684260.1 |
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| CDS CCA 72 bp | GGAGGAGAGGCACAGGGAAGAAGGATGAAGTGGTCCTaGGACCTCAGCGGGATTCGGATTCCCATGTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: GGEAQGRRMKWS*DLSGIRIPMSL Trigger: CAAGGACATGGGAATCCGAATCCCGCTGAGGTCCCAGGACCACTTCATCCTTCTTCCCTGTGCCTCTCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000684260.1 |
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| CDS CAA 72 bp | CACTGCTGGTATTGCATCCAGCCTGGCTTCAGGACGTaGGGAAGAAGGCCCTTGTCTGGTCTCAGGGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: HCWYCIQPGFRT*GRRPLSGLRVH Trigger: GTGGACCCTGAGACCAGACAAGGGCCTTCTTCCCAACGTCCTGAAGCCAGGCTGGATGCAATACCAGCAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296142.4 ENST00000684260.1 |
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| CDS CAA 72 bp | GGAGCACTGGAACCTGGCGAAGGTCCACTGCTGGTATaGCATCCAGCCTGGCTTCAGGACGTTGGGAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: GALEPGEGPLLV*HPAWLQDVGKK Trigger: CTTCTTCCCAACGTCCTGAAGCCAGGCTGGATGCAATACCAGCAGTGGACCTTCGCCAGGTTCCAGTGCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296142.4 ENST00000684260.1 |
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| CDS CCA 72 bp | AGGACTCAGACCTGCCCTCCCTTTGAGGACCTGGATTaGGCCCATGAACCATGTCTCTGCCCCAAGGACAAA | + |
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Preference number: 6 (lower is better) Translates to: RTQTCPPFEDLD*AHEPCLCPKDK Trigger: TTTGTCCTTGGGGCAGAGACATGGTTCATGGGCCCAATCCAGGTCCTCAAAGGGAGGGCAGGTCTGAGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000684260.1 |
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| CDS CAA 72 bp | TCCTGGGACCTCAGCGGGATTCGGATTCCCATGTCCTaGCTCCATGCTCTTTACGTTCCGGCAGACAGCCAA | + |
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Preference number: 6 (lower is better) Translates to: SWDLSGIRIPMS*LHALYVPADSQ Trigger: TTGGCTGTCTGCCGGAACGTAAAGAGCATGGAGCAAGGACATGGGAATCCGAATCCCGCTGAGGTCCCAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000684260.1 |
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| CDS CAA 72 bp | GGCCCAGCACAGAAGCCCTGCAGACATGCCTCACAGTaGTCACTATTGTGTGGCCCTTCAAGAGAGATGTCC | + |
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Preference number: 6 (lower is better) Translates to: GPAQKPCRHASQ*SLLCGPSREMS Trigger: GGACATCTCTCTTGAAGGGCCACACAATAGTGACAACTGTGAGGCATGTCTGCAGGGCTTCTGTGCTGGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296142.4 ENST00000684260.1 |
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| CDS TCA 72 bp | CACCTGTGCCATGGCTTCACCTCCCGCATTAACTCCTaGAACATTTGCTTCCACACTTCTGTGTCCCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: HLCHGFTSRINS*NICFHTSVSPA Trigger: GGCTGGGGACACAGAAGTGTGGAAGCAAATGTTTCAGGAGTTAATGCGGGAGGTGAAGCCATGGCACAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000296142.4 ENST00000684260.1 |
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| CDS GCA 72 bp | AACCTGTATGGGCCCAGCACAGAAGCCCTGCAGACATaGCTCACAGTTGTCACTATTGTGTGGCCCTTCAAG | + |
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Preference number: 6 (lower is better) Translates to: NLYGPSTEALQT*LTVVTIVWPFK Trigger: CTTGAAGGGCCACACAATAGTGACAACTGTGAGGCATGTCTGCAGGGCTTCTGTGCTGGGCCCATACAGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296142.4 ENST00000684260.1 |
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| CDS GCA 72 bp | AGGCTTGTAACCTGTATGGGCCCAGCACAGAAGCCCTaGAGACATGCCTCACAGTTGTCACTATTGTGTGGC | + |
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Preference number: 6 (lower is better) Translates to: RLVTCMGPAQKP*RHASQLSLLCG Trigger: GCCACACAATAGTGACAACTGTGAGGCATGTCTGCAGGGCTTCTGTGCTGGGCCCATACAGGTTACAAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296142.4 ENST00000684260.1 |
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| CDS CCA 72 bp | TCCTCAAACAGAGGTTGGGGGCACTTCTTACATCTCTaGGTAAACACCCTCATCTTCACCTGGCCCCTGGAC | + |
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Preference number: 6 (lower is better) Translates to: SSNRGWGHFLHL*VNTLIFTWPLD Trigger: GTCCAGGGGCCAGGTGAAGATGAGGGTGTTTACCCAGAGATGTAAGAAGTGCCCCCAACCTCTGTTTGAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000296142.4 ENST00000684260.1 |
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| CDS CAA 72 bp | CATGAACCATGTCTCTGCCCCAAGGACAAAGGTCAGTaGGCTCCAAGTTCAGAGGATGGCACTAGGCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: HEPCLCPKDKGQ*APSSEDGTRLH Trigger: GTGGAGCCTAGTGCCATCCTCTGAACTTGGAGCCAACTGACCTTTGTCCTTGGGGCAGAGACATGGTTCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000684260.1 |
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| CDS CAA 90 bp | GGCCCAGCACAGAAGCCCTGCAGACATGCCTCACAGTTGTCACTATaGTGTGGCCCTTCAAGAGAGATGTCCTTGATCATAGGAACCTCC | + |
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Preference number: 6 (lower is better) Translates to: GPAQKPCRHASQLSL*CGPSREMSLIIGTS Trigger: GGAGGTTCCTATGATCAAGGACATCTCTCTTGAAGGGCCACACAATAGTGACAACTGTGAGGCATGTCTGCAGGGCTTCTGTGCTGGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296142.4 ENST00000684260.1 |
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| CDS GCA 72 bp | TTTGAGGACCTGGATTGGGCCCATGAACCATGTCTCTaGCCCAAGGACAAAGGTCAGTTGGCTCCAAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: FEDLDWAHEPCL*PKDKGQLAPSS Trigger: TGAACTTGGAGCCAACTGACCTTTGTCCTTGGGGCAGAGACATGGTTCATGGGCCCAATCCAGGTCCTCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000684260.1 |
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| CDS CCA 72 bp | ATGAACCATGTCTCTGCCCCAAGGACAAAGGTCAGTTaGCTCCAAGTTCAGAGGATGGCACTAGGCTCCACA | + |
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Preference number: 6 (lower is better) Translates to: MNHVSAPRTKVS*LQVQRMALGST Trigger: TGTGGAGCCTAGTGCCATCCTCTGAACTTGGAGCCAACTGACCTTTGTCCTTGGGGCAGAGACATGGTTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000684260.1 |
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| CDS CAA 90 bp | GATTGGGCCCATGAACCATGTCTCTGCCCCAAGGACAAAGGTCAGTaGGCTCCAAGTTCAGAGGATGGCACTAGGCTCCACAAGGAATTT | + |
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Preference number: 6 (lower is better) Translates to: DWAHEPCLCPKDKGQ*APSSEDGTRLHKEF Trigger: AAATTCCTTGTGGAGCCTAGTGCCATCCTCTGAACTTGGAGCCAACTGACCTTTGTCCTTGGGGCAGAGACATGGTTCATGGGCCCAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000684260.1 |
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| CDS CAA 90 bp | ACCTGTATGGGCCCAGCACAGAAGCCCTGCAGACATGCCTCACAGTaGTCACTATTGTGTGGCCCTTCAAGAGAGATGTCCTTGATCATA | + |
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Preference number: 6 (lower is better) Translates to: TCMGPAQKPCRHASQ*SLLCGPSREMSLII Trigger: TATGATCAAGGACATCTCTCTTGAAGGGCCACACAATAGTGACAACTGTGAGGCATGTCTGCAGGGCTTCTGTGCTGGGCCCATACAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296142.4 ENST00000684260.1 |
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| CDS TCA 72 bp | GTGGTTTTGGCATGCGTAGGAATAGACATTCTCTCCTaGGGCCCAGGGCTTAACTACCTCCTCCACCTTGTA | + |
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Preference number: 6 (lower is better) Translates to: VVLACVGIDILS*GPGLNYLLHLV Trigger: TACAAGGTGGAGGAGGTAGTTAAGCCCTGGGCCTCAGGAGAGAATGTCTATTCCTACGCATGCCAAAACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000296142.4 ENST00000684260.1 |
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| CDS CAA 90 bp | GTAAACGGTGGAGACAGGCTACAGGTGTTCTTTCCAGTTCTAACATaGGAAAATCCTTCTCCATCAGGCTGCTGTGCTCATGCTGGGGAG | + |
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Preference number: 6 (lower is better) Translates to: VNGGDRLQVFFPVLT*ENPSPSGCCAHAGE Trigger: CTCCCCAGCATGAGCACAGCAGCCTGATGGAGAAGGATTTTCCAATGTTAGAACTGGAAAGAACACCTGTAGCCTGTCTCCACCGTTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000684260.1 |
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| CDS CCA 72 bp | TTCTCTTGTGTGAACTCAGGGTCCTCAAACAGAGGTTaGGGGCACTTCTTACATCTCTGGGTAAACACCCTC | + |
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Preference number: 6 (lower is better) Translates to: FSCVNSGSSNRG*GHFLHLWVNTL Trigger: GAGGGTGTTTACCCAGAGATGTAAGAAGTGCCCCCAACCTCTGTTTGAGGACCCTGAGTTCACACAAGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000296142.4 ENST00000684260.1 |
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| CDS CCA 72 bp | GCCCTGCAGACATGCCTCACAGTTGTCACTATTGTGTaGCCCTTCAAGAGAGATGTCCTTGATCATAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: ALQTCLTVVTIV*PFKRDVLDHRN Trigger: GTTCCTATGATCAAGGACATCTCTCTTGAAGGGCCACACAATAGTGACAACTGTGAGGCATGTCTGCAGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296142.4 ENST00000684260.1 |
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| CDS CAA 72 bp | GTTCTCTTGTGTGAACTCAGGGTCCTCAAACAGAGGTaGGGGGCACTTCTTACATCTCTGGGTAAACACCCT | + |
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Preference number: 6 (lower is better) Translates to: VLLCELRVLKQR*GALLTSLGKHP Trigger: AGGGTGTTTACCCAGAGATGTAAGAAGTGCCCCCAACCTCTGTTTGAGGACCCTGAGTTCACACAAGAGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000296142.4 ENST00000684260.1 |
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| CDS CAA 72 bp | CAGAAGCCCTGCAGACATGCCTCACAGTTGTCACTATaGTGTGGCCCTTCAAGAGAGATGTCCTTGATCATA | + |
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Preference number: 6 (lower is better) Translates to: QKPCRHASQLSL*CGPSREMSLII Trigger: TATGATCAAGGACATCTCTCTTGAAGGGCCACACAATAGTGACAACTGTGAGGCATGTCTGCAGGGCTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296142.4 ENST00000684260.1 |
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