Pregenerated sensors for RTN4RL2 (Homo sapiens)
Ensembl gene IDs: ENSG00000186907Ensembl transcript IDs: ENST00000335099.8, ENST00000395120.2, ENST00000533205.5
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAAAGGCTCTGCTGGTGGAAGACGCTCTGCAGACAAAAGCCCCTCTaGTGTCCGCTGTGGGCCCTTAGGAGTGCGGGTCAGCGGCTGCCT | + |
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Preference number: 1 (lower is better) Translates to: QRLCWWKTLCRQKPL*CPLWALRSAGQRLP Trigger: AGGCAGCCGCTGACCCGCACTCCTAAGGGCCCACAGCGGACACCAGAGGGGCTTTTGTCTGCAGAGCGTCTTCCACCAGCAGAGCCTTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGCCACAGTGGAGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTCCAGGGAGCCGCAGCCCCGGGTaGACGGGAAGCGGGGATCGG | + |
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Preference number: 2 (lower is better) Translates to: GATVERKVLSRCPKKCPGSRSPG*TGSGDR Trigger: CCGATCCCCGCTTCCCGTCCACCCGGGGCTGCGGCT...CCCTGGACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCTCCACTGTGGCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGCCACAGTGGAGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTCCAGGGCAAGGCCAGGGAAGGTaGGGCGACTGGGGCCGGAGC | + |
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Preference number: 2 (lower is better) Translates to: GATVERKVLSRCPKKCPGQGQGR*GDWGRS Trigger: GCTCCGGCCCCAGTCGCCCCACCTTCCCTGGCCTTG...CCCTGGACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCTCCACTGTGGCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| 3UTR-3UTR TCA 90 bp | GGGGCCACAGTGGAGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTCCAGGGCAGCCTGGCCCTGACTaGGGCATCCCCCAAAGGGTC | + |
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Preference number: 2 (lower is better) Translates to: GATVERKVLSRCPKKCPGQPGPD*GIPQRV Trigger: GACCCTTTGGGGGATGCCTCAGTCAGGGCCAGGCTG...CCCTGGACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCTCCACTGTGGCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| 3UTR-3UTR CCA 90 bp | CACGCAGGGGCCACAGTGGAGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTGCGGGGATCGGACACTaGCCTCTTCGATCTCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: HAGATVERKVLSRCPKKCAGIGH*PLRSQH Trigger: GTGCTGAGATCGAAGAGGCCAGTGTCCGATCCCCGC...ACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCTCCACTGTGGCCCCTGCGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTCCAGGGTAGACTTAGGAGAGGGTCAGCCTGGCCCTaGCTGAGGCATCCCCCAAAG | + |
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Preference number: 2 (lower is better) Translates to: RGKFSPGALKSVQGRLRRGSAWP*LRHPPK Trigger: CTTTGGGGGATGCCTCAGTCAGGGCCAGGCTGACCC...TCTCCTAAGTCTACCCTGGACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| 3UTR-3UTR GCA 90 bp | CACGCAGGGGCCACAGTGGAGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTAGCTTCCAAAGGCTCTaGTGGTGGAAGACGCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: HAGATVERKVLSRCPKKCSFQRL*WWKTLC Trigger: GCAGAGCGTCTTCCACCAGCAGAGCCTTTGGAAGCT...ACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCTCCACTGTGGCCCCTGCGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGCCACAGTGGAGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTCCAGGGCAAAGGCTCTGCTGGTaGAAGACGCTCTGCAGACAA | + |
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Preference number: 2 (lower is better) Translates to: GATVERKVLSRCPKKCPGQRLCW*KTLCRQ Trigger: TTGTCTGCAGAGCGTCTTCCACCAGCAGAGCCTTTG...CCCTGGACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCTCCACTGTGGCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGCCACAGTGGAGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTCCAGGGTTCCAAAGGCTCTGCTaGTGGAAGACGCTCTGCAGA | + |
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Preference number: 2 (lower is better) Translates to: GATVERKVLSRCPKKCPGFQRLC*WKTLCR Trigger: TCTGCAGAGCGTCTTCCACCAGCAGAGCCTTTGGAA...CCCTGGACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCTCCACTGTGGCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTCCAGGGTAGACTTAGGAGACCACACACGCCCTCTTaGGGCTGCCACAAGTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: RGKFSPGALKSVQGRLRRPHTPS*GCHKSG Trigger: TCCTGACTTGTGGCAGCCCCAAGAGGGCGTGTGTGG...TCTCCTAAGTCTACCCTGGACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTCCAGGGTAGACTTAGGAGATGGTGGAAGACGCTCTaGAGACAAAAGCCCCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: RGKFSPGALKSVQGRLRRWWKTL*RQKPLW Trigger: CCAGAGGGGCTTTTGTCTGCAGAGCGTCTTCCACCA...TCTCCTAAGTCTACCCTGGACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTCCAGGGTAGACTTAGGAGAACCCCAGCCTTGGGATaGGGAAGAGTTAATGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: RGKFSPGALKSVQGRLRRTPALG*GRVNGQ Trigger: CTGGCCATTAACTCTTCCCCATCCCAAGGCTGGGGT...TCTCCTAAGTCTACCCTGGACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| 3UTR CCA 72 bp | ACGCTCTGCAGACAAAAGCCCCTCTGGTGTCCGCTGTaGGCCCTTAGGAGTGCGGGTCAGCGGCTGCCTGGG | + |
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Preference number: 3 (lower is better) Translates to: TLCRQKPLWCPL*ALRSAGQRLPG Trigger: CCCAGGCAGCCGCTGACCCGCACTCCTAAGGGCCCACAGCGGACACCAGAGGGGCTTTTGTCTGCAGAGCGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| 3UTR GCA 72 bp | GGGAGCTTCCAAAGGCTCTGCTGGTGGAAGACGCTCTaGAGACAAAAGCCCCTCTGGTGTCCGCTGTGGGCC | + |
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Preference number: 3 (lower is better) Translates to: GSFQRLCWWKTL*RQKPLWCPLWA Trigger: GGCCCACAGCGGACACCAGAGGGGCTTTTGTCTGCAGAGCGTCTTCCACCAGCAGAGCCTTTGGAAGCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| 3UTR-3UTR CAA 90 bp | CACGCAGGGGCCACAGTGGAGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTACCACACACGCCCTCTaGGGGCTGCCACAAGTCAGG | + |
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Preference number: 3 (lower is better) Translates to: HAGATVERKVLSRCPKKCTTHAL*GLPQVR Trigger: CCTGACTTGTGGCAGCCCCAAGAGGGCGTGTGTGGT...ACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCTCCACTGTGGCCCCTGCGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR GCA 90 bp | GGAGCCGCAGCCCCGGGTGGACGGGAAGCGGGGATCGGACACTGGCCTCTTCGACGGAAGGCCGCGCGGTaGACGCCCTGCAGCCGGTTC | + |
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Preference number: 4 (lower is better) Translates to: GAAAPGGREAGIGHWPLRRKAAR*TPCSRF Trigger: GAACCGGCTGCAGGGCGTGCACCGCGCGGCCTTCCG...TCGAAGAGGCCAGTGTCCGATCCCCGCTTCCCGTCCACCCGGGGCTGCGGCTCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR CCA 90 bp | GAGCCGCAGCCCCGGGTGGACGGGAAGCGGGGATCGGACACTGGCCTCTTCGATGACACGCGCGCGCGCTaGAACCAGGCCCAGAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: EPQPRVDGKRGSDTGLFDDTRAR*NQAQSG Trigger: GCCGCTCTGGGCCTGGTTCCAGCGCGCGCGCGTGTC...ATCGAAGAGGCCAGTGTCCGATCCCCGCTTCCCGTCCACCCGGGGCTGCGGCTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR CCA 90 bp | GAGCCGCAGCCCCGGGTGGACGGGAAGCGGGGATCGGACACTGGCCTCTTCGATGCGGGCGGACACGCCTaGAAGTCGGCCTCGCGGAGC | + |
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Preference number: 4 (lower is better) Translates to: EPQPRVDGKRGSDTGLFDAGGHA*KSASRS Trigger: GCTCCGCGAGGCCGACTTCCAGGCGTGTCCGCCCGC...ATCGAAGAGGCCAGTGTCCGATCCCCGCTTCCCGTCCACCCGGGGCTGCGGCTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR CCA 90 bp | GGAGCCGCAGCCCCGGGTGGACGGGAAGCGGGGATCGGACACTGGCCTCTTCGACAAGGCCAGGGAAGGTaGGGCGACTGGGGCCGGAGC | + |
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Preference number: 4 (lower is better) Translates to: GAAAPGGREAGIGHWPLRQGQGR*GDWGRS Trigger: GCTCCGGCCCCAGTCGCCCCACCTTCCCTGGCCTTG...TCGAAGAGGCCAGTGTCCGATCCCCGCTTCCCGTCCACCCGGGGCTGCGGCTCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR GCA 90 bp | GGAGCCGCAGCCCCGGGTGGACGGGAAGCGGGGATCGGACACTGGCCTCTTCGATGCAGCCGGTTCCCGTaGAGCAGCAGCCGGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: GAAAPGGREAGIGHWPLRCSRFP*SSSRSR Trigger: CCTGGACCGGCTGCTGCTGCACGGGAACCGGCTGCA...TCGAAGAGGCCAGTGTCCGATCCCCGCTTCCCGTCCACCCGGGGCTGCGGCTCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR CCA 90 bp | GGAGCCGCAGCCCCGGGTGGACGGGAAGCGGGGATCGGACACTGGCCTCTTCGAAGCCGCTCCAGGCCCTaGAAGGTGTCGGGCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: GAAAPGGREAGIGHWPLRSRSRP*KVSGSS Trigger: GCTGGAGCCCGACACCTTCCAGGGCCTGGAGCGGCT...TCGAAGAGGCCAGTGTCCGATCCCCGCTTCCCGTCCACCCGGGGCTGCGGCTCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR GCA 90 bp | CGGGTGGACGGGAAGCGGGGATCGGACACTGGCCTCTTCGATCTCAGCACCGCAGCCGAGGCGGGAGCTTaGAGCAGGCGCCTGAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: RVDGKRGSDTGLFDLSTAAEAGA*SRRLSP Trigger: CGGGCTCAGGCGCCTGCTGCAAGCTCCCGCCTCGGC...TGCGGTGCTGAGATCGAAGAGGCCAGTGTCCGATCCCCGCTTCCCGTCCACCCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR TCA 90 bp | GGAGCCGCAGCCCCGGGTGGACGGGAAGCGGGGATCGGACACTGGCCTCTTCGAGAAACACGTGCTCTGTaGGCAGCCGCAGGCGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: GAAAPGGREAGIGHWPLRETRAL*AAAGGS Trigger: GGAACCGCCTGCGGCTGCTCACAGAGCACGTGTTTC...TCGAAGAGGCCAGTGTCCGATCCCCGCTTCCCGTCCACCCGGGGCTGCGGCTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR GCA 90 bp | GAGCCGCAGCCCCGGGTGGACGGGAAGCGGGGATCGGACACTGGCCTCTTCGATTCCAGCGAGCGCAGGTaGCGGTTGTCACCGAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: EPQPRVDGKRGSDTGLFDSSERR*RLSPRS Trigger: GGACCTCGGTGACAACCGGCACCTGCGCTCGCTGGA...ATCGAAGAGGCCAGTGTCCGATCCCCGCTTCCCGTCCACCCGGGGCTGCGGCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR CCA 90 bp | GAGCCGCAGCCCCGGGTGGACGGGAAGCGGGGATCGGACACTGGCCTCTTCGATGGACCCAAAGGTGCCTaGCCGCAGCGTGCGGATGAG | + |
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Preference number: 4 (lower is better) Translates to: EPQPRVDGKRGSDTGLFDGPKGA*PQRADE Trigger: CTCATCCGCACGCTGCGGCCAGGCACCTTTGGGTCC...ATCGAAGAGGCCAGTGTCCGATCCCCGCTTCCCGTCCACCCGGGGCTGCGGCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR CCA 90 bp | GAGCCGCAGCCCCGGGTGGACGGGAAGCGGGGATCGGACACTGGCCTCTTCGATGATCTCGGTAGAGGGTaGAGGGATCGGCTGGGGGCG | + |
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Preference number: 4 (lower is better) Translates to: EPQPRVDGKRGSDTGLFDDLGRG*RDRLGA Trigger: CGCCCCCAGCCGATCCCTCCACCCTCTACCGAGATC...ATCGAAGAGGCCAGTGTCCGATCCCCGCTTCCCGTCCACCCGGGGCTGCGGCTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR CCA 90 bp | GAGCCGCAGCCCCGGGTGGACGGGAAGCGGGGATCGGACACTGGCCTCTTCGATCCAAAGGGTCCTGGGTaGGGCTCCCTGGGGGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: EPQPRVDGKRGSDTGLFDPKGPG*GSLGEL Trigger: AAGCTCCCCCAGGGAGCCCCACCCAGGACCCTTTGG...ATCGAAGAGGCCAGTGTCCGATCCCCGCTTCCCGTCCACCCGGGGCTGCGGCTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR GCA 90 bp | GAGCCGCAGCCCCGGGTGGACGGGAAGCGGGGATCGGACACTGGCCTCTTCGATGGAAGAGTCGCTGAGTaGTGGGTGGCAGGGACAGCG | + |
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Preference number: 4 (lower is better) Translates to: EPQPRVDGKRGSDTGLFDGRVAE*WVAGTA Trigger: CGCTGTCCCTGCCACCCAGCACTCAGCGACTCTTCC...ATCGAAGAGGCCAGTGTCCGATCCCCGCTTCCCGTCCACCCGGGGCTGCGGCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR GCA 90 bp | CGGGTGGACGGGAAGCGGGGATCGGACACTGGCCTCTTCGATCTCAGCACCGCAGCAGCCGGTCCAGGCTaGCCAGGCCGCGAAACACGT | + |
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Preference number: 4 (lower is better) Translates to: RVDGKRGSDTGLFDLSTAAAGPG*PGRETR Trigger: ACGTGTTTCGCGGCCTGGGCAGCCTGGACCGGCTGC...TGCGGTGCTGAGATCGAAGAGGCCAGTGTCCGATCCCCGCTTCCCGTCCACCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR CCA 90 bp | GAGCCGCAGCCCCGGGTGGACGGGAAGCGGGGATCGGACACTGGCCTCTTCGATGAGAAGTTGTTGGCCTaGCAGCTCACGGTGGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: EPQPRVDGKRGSDTGLFDEKLLA*QLTVGG Trigger: CCCGCCCACCGTGAGCTGCCAGGCCAACAACTTCTC...ATCGAAGAGGCCAGTGTCCGATCCCCGCTTCCCGTCCACCCGGGGCTGCGGCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR TCA 90 bp | CGGGTGGACGGGAAGCGGGGATCGGACACTGGCCTCTTCGATCTCAGCACCGCACTTGCAGCAGGCGCCTaGGCCCGGGCAGCATCTTGT | + |
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Preference number: 4 (lower is better) Translates to: RVDGKRGSDTGLFDLSTALAAGA*ARAASC Trigger: ACAAGATGCTGCCCGGGCTCAGGCGCCTGCTGCAAG...TGCGGTGCTGAGATCGAAGAGGCCAGTGTCCGATCCCCGCTTCCCGTCCACCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR GCA 90 bp | GAGCCGCAGCCCCGGGTGGACGGGAAGCGGGGATCGGACACTGGCCTCTTCGATGGGATGAGTAGCAGGTaGAGAGCATGGGGCAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: EPQPRVDGKRGSDTGLFDGMSSR*RAWGSW Trigger: CCAGCTGCCCCATGCTCTGCACCTGCTACTCATCCC...ATCGAAGAGGCCAGTGTCCGATCCCCGCTTCCCGTCCACCCGGGGCTGCGGCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR CCA 90 bp | CGGGTGGACGGGAAGCGGGGATCGGACACTGGCCTCTTCGATCTCAGCACCGCACTGGGTGGGGCTCCCTaGGGGAGCTTCCAAAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: RVDGKRGSDTGLFDLSTALGGAP*GSFQRL Trigger: GAGCCTTTGGAAGCTCCCCCAGGGAGCCCCACCCAG...TGCGGTGCTGAGATCGAAGAGGCCAGTGTCCGATCCCCGCTTCCCGTCCACCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR GCA 90 bp | CGGGTGGACGGGAAGCGGGGATCGGACACTGGCCTCTTCGATCTCAGCACCGCAAGGCCGCGAAACACGTaGTCTGTGAGCAGCCGCAGG | + |
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Preference number: 4 (lower is better) Translates to: RVDGKRGSDTGLFDLSTARPRNT*SVSSRR Trigger: CCTGCGGCTGCTCACAGAGCACGTGTTTCGCGGCCT...TGCGGTGCTGAGATCGAAGAGGCCAGTGTCCGATCCCCGCTTCCCGTCCACCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR GCA 90 bp | GGAGCCGCAGCCCCGGGTGGACGGGAAGCGGGGATCGGACACTGGCCTCTTCGATGGTGGAAGACGCTCTaGAGACAAAAGCCCCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: GAAAPGGREAGIGHWPLRWWKTL*RQKPLW Trigger: CCAGAGGGGCTTTTGTCTGCAGAGCGTCTTCCACCA...TCGAAGAGGCCAGTGTCCGATCCCCGCTTCCCGTCCACCCGGGGCTGCGGCTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR CCA 90 bp | CGGGTGGACGGGAAGCGGGGATCGGACACTGGCCTCTTCGATCTCAGCACCGCACTCTGGTGTCCGCTGTaGGCCCTTAGGAGTGCGGGT | + |
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Preference number: 4 (lower is better) Translates to: RVDGKRGSDTGLFDLSTALWCPL*ALRSAG Trigger: ACCCGCACTCCTAAGGGCCCACAGCGGACACCAGAG...TGCGGTGCTGAGATCGAAGAGGCCAGTGTCCGATCCCCGCTTCCCGTCCACCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR CCA 90 bp | GAGCCGCAGCCCCGGGTGGACGGGAAGCGGGGATCGGACACTGGCCTCTTCGATACCCCAGCCTTGGGATaGGGAAGAGTTAATGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: EPQPRVDGKRGSDTGLFDTPALG*GRVNGQ Trigger: CTGGCCATTAACTCTTCCCCATCCCAAGGCTGGGGT...ATCGAAGAGGCCAGTGTCCGATCCCCGCTTCCCGTCCACCCGGGGCTGCGGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR GCA 90 bp | CACGCAGGGGCCACAGTGGAGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTGGTTGGAGGAGCTGTTaGCGCGGGCGCGGCTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: HAGATVERKVLSRCPKKCGWRSC*RGRGCP Trigger: CGGGCAGCCGCGCCCGCGGCAACAGCTCCTCCAACC...ACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCTCCACTGTGGCCCCTGCGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR CCA 90 bp | CGGGTGGACGGGAAGCGGGGATCGGACACTGGCCTCTTCGATCTCAGCACCGCACAGAGGAGAAGTTGTTaGCCTGGCAGCTCACGGTGG | + |
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Preference number: 4 (lower is better) Translates to: RVDGKRGSDTGLFDLSTAQRRSC*PGSSRW Trigger: CCACCGTGAGCTGCCAGGCCAACAACTTCTCCTCTG...TGCGGTGCTGAGATCGAAGAGGCCAGTGTCCGATCCCCGCTTCCCGTCCACCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR CCA 90 bp | GAGCCGCAGCCCCGGGTGGACGGGAAGCGGGGATCGGACACTGGCCTCTTCGATAAGTCATCCTGTAGGTaGAGCAGGCTGTTCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: EPQPRVDGKRGSDTGLFDKSSCR*SRLFSW Trigger: CCAGGAGAACAGCCTGCTCCACCTACAGGATGACTT...ATCGAAGAGGCCAGTGTCCGATCCCCGCTTCCCGTCCACCCGGGGCTGCGGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR CCA 90 bp | GGGGCCACAGTGGAGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTCCAGGGGGCAAAGCAGAGGGCTaGGGAGCCCGGCCGAGAGCG | + |
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Preference number: 4 (lower is better) Translates to: GATVERKVLSRCPKKCPGGKAEG*GARPRA Trigger: CGCTCTCGGCCGGGCTCCCCAGCCCTCTGCTTTGCC...CCCTGGACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCTCCACTGTGGCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR CCA 90 bp | CACGCAGGGGCCACAGTGGAGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTAGCCGCAGCCCCGGGTaGACGGGAAGCGGGGATCGG | + |
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Preference number: 4 (lower is better) Translates to: HAGATVERKVLSRCPKKCSRSPG*TGSGDR Trigger: CCGATCCCCGCTTCCCGTCCACCCGGGGCTGCGGCT...ACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCTCCACTGTGGCCCCTGCGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR CCA 90 bp | CGGGTGGACGGGAAGCGGGGATCGGACACTGGCCTCTTCGATCTCAGCACCGCAAGACAAAAGCCCCTCTaGTGTCCGCTGTGGGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: RVDGKRGSDTGLFDLSTARQKPL*CPLWAL Trigger: AAGGGCCCACAGCGGACACCAGAGGGGCTTTTGTCT...TGCGGTGCTGAGATCGAAGAGGCCAGTGTCCGATCCCCGCTTCCCGTCCACCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR GCA 90 bp | CACGCAGGGGCCACAGTGGAGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTCCGCGCCCCGCTAGCTaGGCTGTCCGCTCGAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: HAGATVERKVLSRCPKKCPRPAS*AVRSRV Trigger: GACTCTCGAGCGGACAGCGCAGCTAGCGGGGCGCGG...ACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCTCCACTGTGGCCCCTGCGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR GCA 90 bp | GGGGCCACAGTGGAGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTCCAGGGGGTTGGACCCAAAGGTaGCTGGCCGCAGCGTGCGGA | + |
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Preference number: 4 (lower is better) Translates to: GATVERKVLSRCPKKCPGGWTQR*LAAACG Trigger: TCCGCACGCTGCGGCCAGGCACCTTTGGGTCCAACC...CCCTGGACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCTCCACTGTGGCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR CCA 90 bp | GGGGCCACAGTGGAGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTCCAGGGCCCCGTACAGGTGGTTaGAGGAGCTGTTGCCGCGGG | + |
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Preference number: 4 (lower is better) Translates to: GATVERKVLSRCPKKCPGPRTGG*RSCCRG Trigger: CCCGCGGCAACAGCTCCTCCAACCACCTGTACGGGG...CCCTGGACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCTCCACTGTGGCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR CCA 90 bp | GGGGCCACAGTGGAGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTCCAGGGCGCAGTCAGAGGTGGTaGGGCACCAGGAGCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: GATVERKVLSRCPKKCPGRSQRW*GTRSRR Trigger: CCTCCTGCTCCTGGTGCCCCACCACCTCTGACTGCG...CCCTGGACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCTCCACTGTGGCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR CCA 90 bp | CGGGTGGACGGGAAGCGGGGATCGGACACTGGCCTCTTCGATCTCAGCACCGCACAAAGGCTCTGCTGGTaGAAGACGCTCTGCAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: RVDGKRGSDTGLFDLSTAQRLCW*KTLCRQ Trigger: TTGTCTGCAGAGCGTCTTCCACCAGCAGAGCCTTTG...TGCGGTGCTGAGATCGAAGAGGCCAGTGTCCGATCCCCGCTTCCCGTCCACCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR TCA 90 bp | CACGCAGGGGCCACAGTGGAGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTCAGCCTGGCCCTGACTaGGGCATCCCCCAAAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: HAGATVERKVLSRCPKKCQPGPD*GIPQRV Trigger: GACCCTTTGGGGGATGCCTCAGTCAGGGCCAGGCTG...ACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCTCCACTGTGGCCCCTGCGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR TCA 90 bp | CGGGTGGACGGGAAGCGGGGATCGGACACTGGCCTCTTCGATCTCAGCACCGCACCAAACAACTTCTTTTaGTCTTCACCACGCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RVDGKRGSDTGLFDLSTAPNNFF*SSPRRG Trigger: GCCCCTGCGTGGTGAAGATCAAAAGAAGTTGTTTGG...TGCGGTGCTGAGATCGAAGAGGCCAGTGTCCGATCCCCGCTTCCCGTCCACCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR GCA 90 bp | GGGGCCACAGTGGAGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTCCAGGGAGCATCTTGTCTCGATaGTCGGGGGAGGGGGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: GATVERKVLSRCPKKCPGSILSR*SGEGAA Trigger: CGCTGCCCCCTCCCCCGAGCATCGAGACAAGATGCT...CCCTGGACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCTCCACTGTGGCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR GCA 90 bp | GGGGCCACAGTGGAGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTCCAGGGACGCCCTCTTGGGGCTaGCACAAGTCAGGACAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GATVERKVLSRCPKKCPGTPSWG*HKSGQP Trigger: GGGCTGTCCTGACTTGTGGCAGCCCCAAGAGGGCGT...CCCTGGACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCTCCACTGTGGCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR CCA 90 bp | GGGGCCACAGTGGAGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTCCAGGGCCGTGGAGGAAGAGGTaGCTCAGGTTGGCCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GATVERKVLSRCPKKCPGPWRKR*LRLARS Trigger: GGACCTGGCCAACCTGAGCCACCTCTTCCTCCACGG...CCCTGGACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCTCCACTGTGGCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR TCA 90 bp | AGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTCCAGGGTAGACTTAGGAGACTCCCACTCGCTCCCTaGGCCCGCCGGATGCACGGC | + |
|
Preference number: 4 (lower is better) Translates to: RGKFSPGALKSVQGRLRRLPLAP*ARRMHG Trigger: GCCGTGCATCCGGCGGGCTCAGGGAGCGAGTGGGAG...TCTCCTAAGTCTACCCTGGACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR TCA 90 bp | CACGCAGGGGCCACAGTGGAGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTTGCAGGAAGAGTCGCTaGGTGCTGGGTGGCAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HAGATVERKVLSRCPKKCCRKSR*VLGGRD Trigger: GTCCCTGCCACCCAGCACTCAGCGACTCTTCCTGCA...ACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCTCCACTGTGGCCCCTGCGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR TCA 90 bp | CACGCAGGGGCCACAGTGGAGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTTGCCGGGCAGGCTGCTaGGCTGGCAGCGGTACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: HAGATVERKVLSRCPKKCCRAGC*AGSGTN Trigger: ATTTGTACCGCTGCCAGCTCAGCAGCCTGCCCGGCA...ACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCTCCACTGTGGCCCCTGCGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR GCA 90 bp | AGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTCCAGGGTAGACTTAGGAGAGCGCGGTGCACGCCCTaGAGCCGGTTCCCGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RGKFSPGALKSVQGRLRRARCTP*SRFPCS Trigger: GCTGCACGGGAACCGGCTGCAGGGCGTGCACCGCGC...TCTCCTAAGTCTACCCTGGACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR CCA 90 bp | GGGGCCACAGTGGAGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTCCAGGGGCGGGGATCGGACACTaGCCTCTTCGATCTCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GATVERKVLSRCPKKCPGAGIGH*PLRSQH Trigger: GTGCTGAGATCGAAGAGGCCAGTGTCCGATCCCCGC...CCCTGGACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCTCCACTGTGGCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR CCA 90 bp | GGGGCCACAGTGGAGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTCCAGGGCCACACACGCCCTCTTaGGGCTGCCACAAGTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GATVERKVLSRCPKKCPGPHTPS*GCHKSG Trigger: TCCTGACTTGTGGCAGCCCCAAGAGGGCGTGTGTGG...CCCTGGACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCTCCACTGTGGCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR TCA 90 bp | CACGCAGGGGCCACAGTGGAGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTGCCGCAGCGTGCGGATaGGGTTGTTCTGCAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HAGATVERKVLSRCPKKCAAACG*GCSAGR Trigger: TCTTCCTGCAGAACAACCTCATCCGCACGCTGCGGC...ACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCTCCACTGTGGCCCCTGCGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR GCA 90 bp | CACGCAGGGGCCACAGTGGAGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTTACAAATGCAGCGACTaGAGCCGCTCCAGGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HAGATVERKVLSRCPKKCYKCSD*SRSRPW Trigger: CCAGGGCCTGGAGCGGCTGCAGTCGCTGCATTTGTA...ACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCTCCACTGTGGCCCCTGCGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR GCA 90 bp | CACGCAGGGGCCACAGTGGAGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTTGGCAGCGGTACAAATaGAGCGACTGCAGCCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HAGATVERKVLSRCPKKCWQRYK*SDCSRS Trigger: GGAGCGGCTGCAGTCGCTGCATTTGTACCGCTGCCA...ACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCTCCACTGTGGCCCCTGCGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR CCA 90 bp | GGGGCCACAGTGGAGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTCCAGGGAGAGGTGGCTCAGGTTaGCCAGGTCCGCGAACAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GATVERKVLSRCPKKCPGRGGSG*PGPRTS Trigger: ACTTGTTCGCGGACCTGGCCAACCTGAGCCACCTCT...CCCTGGACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCTCCACTGTGGCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR GCA 90 bp | AGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTCCAGGGTAGACTTAGGAGAGCGCCGGGGCACATCTaGTCCCCTCGCTGGTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RGKFSPGALKSVQGRLRRAPGHI*SPRWSS Trigger: TGAGGACCAGCGAGGGGAGCAGATGTGCCCCGGCGC...TCTCCTAAGTCTACCCTGGACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR CCA 90 bp | AGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTCCAGGGTAGACTTAGGAGAAGCAGGTGCAGAGCATaGGGCAGCTGGGGGCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RGKFSPGALKSVQGRLRRSRCRA*GSWGPP Trigger: TGGCGGCCCCCAGCTGCCCCATGCTCTGCACCTGCT...TCTCCTAAGTCTACCCTGGACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR CCA 90 bp | AGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTCCAGGGTAGACTTAGGAGAAGGTCACGTCGGAGCTaGACACGCGCGCGCGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RGKFSPGALKSVQGRLRRRSRRS*TRARAG Trigger: TCCAGCGCGCGCGCGTGTCCAGCTCCGACGTGACCT...TCTCCTAAGTCTACCCTGGACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR CCA 90 bp | AGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTCCAGGGTAGACTTAGGAGACCTGGCAGCTCACGGTaGGCGGGGATGAGTAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RGKFSPGALKSVQGRLRRPGSSR*AGMSSR Trigger: CCTGCTACTCATCCCCGCCCACCGTGAGCTGCCAGG...TCTCCTAAGTCTACCCTGGACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR CCA 90 bp | AGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTCCAGGGTAGACTTAGGAGATCGCTGAGTGCTGGGTaGCAGGGACAGCGGCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: RGKFSPGALKSVQGRLRRSLSAG*QGQRHR Trigger: TCTGTGCCGCTGTCCCTGCCACCCAGCACTCAGCGA...TCTCCTAAGTCTACCCTGGACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR CCA 90 bp | AGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTCCAGGGTAGACTTAGGAGAGCCACCCCGTACAGGTaGTTGGAGGAGCTGTTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RGKFSPGALKSVQGRLRRATPYR*LEELLP Trigger: CGGCAACAGCTCCTCCAACCACCTGTACGGGGTGGC...TCTCCTAAGTCTACCCTGGACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR CCA 90 bp | CACGCAGGGGCCACAGTGGAGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTTTCCAAAGGCTCTGCTaGTGGAAGACGCTCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HAGATVERKVLSRCPKKCFQRLC*WKTLCR Trigger: TCTGCAGAGCGTCTTCCACCAGCAGAGCCTTTGGAA...ACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCTCCACTGTGGCCCCTGCGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR CCA 90 bp | AGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTCCAGGGTAGACTTAGGAGAGGCAGGCTGCTGAGCTaGCAGCGGTACAAATGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RGKFSPGALKSVQGRLRRGRLLS*QRYKCS Trigger: GCTGCATTTGTACCGCTGCCAGCTCAGCAGCCTGCC...TCTCCTAAGTCTACCCTGGACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR GCA 90 bp | AGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTCCAGGGTAGACTTAGGAGAGCAAGTGGCGGAAAGTaGCCGGGTAGATGGTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RGKFSPGALKSVQGRLRRASGGK*PGRWWR Trigger: TCTCCACCATCTACCCGGGCACTTTCCGCCACTTGC...TCTCCTAAGTCTACCCTGGACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR GCA 90 bp | AGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTCCAGGGTAGACTTAGGAGAAGCTTCCAAAGGCTCTaGTGGTGGAAGACGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RGKFSPGALKSVQGRLRRSFQRL*WWKTLC Trigger: GCAGAGCGTCTTCCACCAGCAGAGCCTTTGGAAGCT...TCTCCTAAGTCTACCCTGGACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR CCA 90 bp | AGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTCCAGGGTAGACTTAGGAGAAAGTGCCCGGGTAGATaGTGGAGAGGTTGTTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RGKFSPGALKSVQGRLRRKCPGR*WRGCWR Trigger: TCTCCAACAACCTCTCCACCATCTACCCGGGCACTT...TCTCCTAAGTCTACCCTGGACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR CAA 90 bp | GGAGCCGCAGCCCCGGGTGGACGGGAAGCGGGGATCGGACACTGGCCTCTTCGAGCCCAGGGGTTAGCGTaGAGCCGCAGGAACTCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GAAAPGGREAGIGHWPLRAQGLA*SRRNSS Trigger: GCTCGAGTTCCTGCGGCTCAACGCTAACCCCTGGGC...TCGAAGAGGCCAGTGTCCGATCCCCGCTTCCCGTCCACCCGGGGCTGCGGCTCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR CAA 90 bp | GGAGCCGCAGCCCCGGGTGGACGGGAAGCGGGGATCGGACACTGGCCTCTTCGAGGCACAGAGGAGAAGTaGTTGGCCTGGCAGCTCACG | + |
|
Preference number: 5 (lower is better) Translates to: GAAAPGGREAGIGHWPLRGTEEK*LAWQLT Trigger: CGTGAGCTGCCAGGCCAACAACTTCTCCTCTGTGCC...TCGAAGAGGCCAGTGTCCGATCCCCGCTTCCCGTCCACCCGGGGCTGCGGCTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS CCA 90 bp | AGGCTGACCAGGCCTCGGAAGATGTTGCCGGGCAGGCTGCTGAGCTaGCAGCGGTACAAATGCAGCGACTGCAGCCGCTCCAGGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RLTRPRKMLPGRLLS*QRYKCSDCSRSRPW Trigger: CCAGGGCCTGGAGCGGCTGCAGTCGCTGCATTTGTACCGCTGCCAGCTCAGCAGCCTGCCCGGCAACATCTTCCGAGGCCTGGTCAGCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000335099.8 ENST00000395120.2 ENST00000533205.5 |
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| CDS-3UTR CAA 90 bp | CACGCAGGGGCCACAGTGGAGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTGGCCGAGGCGGGAGCTaGCAGCAGGCGCCTGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: HAGATVERKVLSRCPKKCGRGGS*QQAPEP Trigger: GGGCTCAGGCGCCTGCTGCAAGCTCCCGCCTCGGCC...ACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCTCCACTGTGGCCCCTGCGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR CAA 90 bp | GAGCCGCAGCCCCGGGTGGACGGGAAGCGGGGATCGGACACTGGCCTCTTCGATATGGTGGAGAGGTTGTaGGAGAAGAGCCACAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: EPQPRVDGKRGSDTGLFDMVERL*EKSHRV Trigger: CACCCTGTGGCTCTTCTCCAACAACCTCTCCACCAT...ATCGAAGAGGCCAGTGTCCGATCCCCGCTTCCCGTCCACCCGGGGCTGCGGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS CCA 90 bp | ACGTGCTCTGTGAGCAGCCGCAGGCGGTTCCCGTGGAGGAAGAGGTaGCTCAGGTTGGCCAGGTCCGCGAACAAGTCATCCTGTAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TCSVSSRRRFPWRKR*LRLARSANKSSCRW Trigger: CCACCTACAGGATGACTTGTTCGCGGACCTGGCCAACCTGAGCCACCTCTTCCTCCACGGGAACCGCCTGCGGCTGCTCACAGAGCACGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR CAA 90 bp | GGGGCCACAGTGGAGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTCCAGGGAGGCCTCGGAAGATGTaGCCGGGCAGGCTGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GATVERKVLSRCPKKCPGRPRKM*PGRLLS Trigger: GCTCAGCAGCCTGCCCGGCAACATCTTCCGAGGCCT...CCCTGGACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCTCCACTGTGGCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR CAA 90 bp | GGGGCCACAGTGGAGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTCCAGGGCACAGGGTGAGCAGGTaGGACCCAAAGGTGCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GATVERKVLSRCPKKCPGHRVSR*DPKVPG Trigger: GCCAGGCACCTTTGGGTCCAACCTGCTCACCCTGTG...CCCTGGACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCTCCACTGTGGCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR CAA 90 bp | CACGCAGGGGCCACAGTGGAGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTACCCCGTACAGGTGGTaGGAGGAGCTGTTGCCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: HAGATVERKVLSRCPKKCTPYRW*EELLPR Trigger: CCGCGGCAACAGCTCCTCCAACCACCTGTACGGGGT...ACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCTCCACTGTGGCCCCTGCGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR CAA 90 bp | GGGGCCACAGTGGAGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTCCAGGGACCACACACGCCCTCTaGGGGCTGCCACAAGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GATVERKVLSRCPKKCPGTTHAL*GLPQVR Trigger: CCTGACTTGTGGCAGCCCCAAGAGGGCGTGTGTGGT...CCCTGGACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCTCCACTGTGGCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR CAA 90 bp | CACGCAGGGGCCACAGTGGAGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTACAGAGGAGAAGTTGTaGGCCTGGCAGCTCACGGTG | + |
|
Preference number: 5 (lower is better) Translates to: HAGATVERKVLSRCPKKCTEEKL*AWQLTV Trigger: CACCGTGAGCTGCCAGGCCAACAACTTCTCCTCTGT...ACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCTCCACTGTGGCCCCTGCGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR CAA 90 bp | AGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTCCAGGGTAGACTTAGGAGAAGCCCGGGCAGCATCTaGTCTCGATGCTCGGGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RGKFSPGALKSVQGRLRRSPGSI*SRCSGE Trigger: CTCCCCCGAGCATCGAGACAAGATGCTGCCCGGGCT...TCTCCTAAGTCTACCCTGGACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS-3UTR CAA 90 bp | AGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTCCAGGGTAGACTTAGGAGACAGCTCCTCCAGGGCTaGCAAGTGGCGGAAAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RGKFSPGALKSVQGRLRRQLLQG*QVAESA Trigger: GGCACTTTCCGCCACTTGCAAGCCCTGGAGGAGCTG...TCTCCTAAGTCTACCCTGGACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000335099.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGAAAGTTCTCTCCAGGTGCCCTAAAAAGTGTCCAGGGTAGACTTAGGAGAAAGAGGTGGCTCAGGTaGGCCAGGTCCGCGAACAAG | + |
|
Preference number: 5 (lower is better) Translates to: RGKFSPGALKSVQGRLRRKRWLR*ARSANK Trigger: CTTGTTCGCGGACCTGGCCAACCTGAGCCACCTCTT...TCTCCTAAGTCTACCCTGGACACTTTTTAGGGCACCTGGAGAGAACTTTCCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS GCA 72 bp | CCTCGGCCACCCCGTACAGGTGGTTGGAGGAGCTGTTaGCGCGGGCGCGGCTGCCCGGCCGCGTGGGTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: PRPPRTGGWRSC*RGRGCPAAWVP Trigger: CGGCACCCACGCGGCCGGGCAGCCGCGCCCGCGGCAACAGCTCCTCCAACCACCTGTACGGGGTGGCCGAGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS CAA 90 bp | GCCCAGAGCGGCCGCGCGCGGCAGTCGCACGCCCAGGGGTTAGCGTaGAGCCGCAGGAACTCGAGCGAGGGCAGGTCGGCGAGCGCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: AQSGRARQSHAQGLA*SRRNSSEGRSASAS Trigger: CGAGGCGCTCGCCGACCTGCCCTCGCTCGAGTTCCTGCGGCTCAACGCTAACCCCTGGGCGTGCGACTGCCGCGCGCGGCCGCTCTGGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335099.8 |
||
| CDS CAA 72 bp | GGCCGCGCGCGGCAGTCGCACGCCCAGGGGTTAGCGTaGAGCCGCAGGAACTCGAGCGAGGGCAGGTCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: GRARQSHAQGLA*SRRNSSEGRSA Trigger: CGCCGACCTGCCCTCGCTCGAGTTCCTGCGGCTCAACGCTAACCCCTGGGCGTGCGACTGCCGCGCGCGGCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS GCA 72 bp | CTGGCCGTCGACGCCCAGCGCCCGCGCCCCGCTAGCTaGGCTGTCCGCTCGAGAGTCCGTCAGTCCGTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LAVDAQRPRPAS*AVRSRVRQSVC Trigger: ACAGACGGACTGACGGACTCTCGAGCGGACAGCGCAGCTAGCGGGGCGCGGGCGCTGGGCGTCGACGGCCAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS CCA 72 bp | CCCGCGAGTCTTCGGCAGGCAGATCTCGGTAGAGGGTaGAGGGATCGGCTGGGGGCGCCCCGGCCTCGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PASLRQADLGRG*RDRLGAPRPRP Trigger: TGGCCGAGGCCGGGGCGCCCCCAGCCGATCCCTCCACCCTCTACCGAGATCTGCCTGCCGAAGACTCGCGGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS TCA 72 bp | GGAGGCAGGCCGAGGCGGGAGCTTGCAGCAGGCGCCTaGGCCCGGGCAGCATCTTGTCTCGATGCTCGGGGG | + |
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Preference number: 6 (lower is better) Translates to: GGRPRRELAAGA*ARAASCLDARG Trigger: CCCCCGAGCATCGAGACAAGATGCTGCCCGGGCTCAGGCGCCTGCTGCAAGCTCCCGCCTCGGCCTGCCTCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS CCA 72 bp | CGGTACAAATGCAGCGACTGCAGCCGCTCCAGGCCCTaGAAGGTGTCGGGCTCCAGCGAGCGCAGGTGCCGG | + |
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Preference number: 6 (lower is better) Translates to: RYKCSDCSRSRP*KVSGSSERRCR Trigger: CCGGCACCTGCGCTCGCTGGAGCCCGACACCTTCCAGGGCCTGGAGCGGCTGCAGTCGCTGCATTTGTACCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000335099.8 ENST00000395120.2 ENST00000533205.5 |
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| CDS CCA 72 bp | GCAGCCCCGGGTGGACGGGAAGCGGGGATCGGACACTaGCCTCTTCGATCTCAGCACCGCAGTCAGAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: AAPGGREAGIGH*PLRSQHRSQRW Trigger: CCACCTCTGACTGCGGTGCTGAGATCGAAGAGGCCAGTGTCCGATCCCCGCTTCCCGTCCACCCGGGGCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335099.8 |
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| CDS GCA 72 bp | AGGCTGCTGAGCTGGCAGCGGTACAAATGCAGCGACTaGAGCCGCTCCAGGCCCTGGAAGGTGTCGGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: RLLSWQRYKCSD*SRSRPWKVSGS Trigger: GGAGCCCGACACCTTCCAGGGCCTGGAGCGGCTGCAGTCGCTGCATTTGTACCGCTGCCAGCTCAGCAGCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000335099.8 ENST00000395120.2 ENST00000533205.5 |
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| CDS GCA 72 bp | TTGCCGGGCAGGCTGCTGAGCTGGCAGCGGTACAAATaGAGCGACTGCAGCCGCTCCAGGCCCTGGAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: LPGRLLSWQRYK*SDCSRSRPWKV Trigger: CACCTTCCAGGGCCTGGAGCGGCTGCAGTCGCTGCATTTGTACCGCTGCCAGCTCAGCAGCCTGCCCGGCAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000335099.8 ENST00000395120.2 ENST00000533205.5 |
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| CDS CCA 72 bp | AGGCCTCGGAAGATGTTGCCGGGCAGGCTGCTGAGCTaGCAGCGGTACAAATGCAGCGACTGCAGCCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: RPRKMLPGRLLS*QRYKCSDCSRS Trigger: GGAGCGGCTGCAGTCGCTGCATTTGTACCGCTGCCAGCTCAGCAGCCTGCCCGGCAACATCTTCCGAGGCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000335099.8 ENST00000395120.2 ENST00000533205.5 |
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| CDS TCA 72 bp | GGTTGGACCCAAAGGTGCCTGGCCGCAGCGTGCGGATaGGGTTGTTCTGCAGGAAGAGTCGCTGAGTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: GWTQRCLAAACG*GCSAGRVAECW Trigger: CCAGCACTCAGCGACTCTTCCTGCAGAACAACCTCATCCGCACGCTGCGGCCAGGCACCTTTGGGTCCAACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000335099.8 ENST00000395120.2 ENST00000533205.5 |
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