RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RTN4RL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000185924

Ensembl transcript IDs: ENST00000331238.7

Found 288 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTTGCCAGAGTGGACACTGTCCGTGGGCGCTCTGCGGGGCTGGCTaGGACAGCCGGCTGAGAAGCGCCACCCCCTCCCGCCTAGGGCTG +
Preference number: 1 (lower is better)
Translates to: PCQSGHCPWALCGAG*DSRLRSATPSRLGL
Trigger: CAGCCCTAGGCGGGAGGGGGTGGCGCTTCTCAGCCGGCTGTCCCAGCCAGCCCCGCAGAGCGCCCACGGACAGTGTCCACTCTGGCAAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR GCA 90 bp GCCCTCCAGACCTCTCGGAACGATCGGGATTCCACAGAGCCCCGGTaGCGCCGTCGGGGGCAATTGTCCCACTGTTGCCAGTGGAGGATG +
Preference number: 1 (lower is better)
Translates to: ALQTSRNDRDSTEPR*RRRGQLSHCCQWRM
Trigger: CATCCTCCACTGGCAACAGTGGGACAATTGCCCCCGACGGCGGCACCGGGGCTCTGTGGAATCCCGATCGTTCCGAGAGGTCTGGAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR CCA 90 bp CCAGTGGAGGATGCACTTGGAGTGCCTTTTCCCACCTTGCCAGAGTaGACACTGTCCGTGGGCGCTCTGCGGGGCTGGCTGGGACAGCCG +
Preference number: 1 (lower is better)
Translates to: PVEDALGVPFPTLPE*TLSVGALRGWLGQP
Trigger: CGGCTGTCCCAGCCAGCCCCGCAGAGCGCCCACGGACAGTGTCCACTCTGGCAAGGTGGGAAAAGGCACTCCAAGTGCATCCTCCACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR CCA 90 bp GGCCTCCCGAGCCTCTGCCTGCACCCTGAGCATCCCCAGGACGGCTaGGAGGGCCAGGTCTTCCGTGATGCAGAAGTGCCTGAGATGGTT +
Preference number: 1 (lower is better)
Translates to: GLPSLCLHPEHPQDG*EGQVFRDAEVPEMV
Trigger: AACCATCTCAGGCACTTCTGCATCACGGAAGACCTGGCCCTCCCAGCCGTCCTGGGGATGCTCAGGGTGCAGGCAGAGGCTCGGGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR GCA 90 bp GCCCTCATTGTTCCCCTTCTGCTAAGGCCCCCGACGCCTCCCTCCTaGTGTCCCACACAGGGCCCTTGCTGGGTCACACACCAAACAGCC +
Preference number: 1 (lower is better)
Translates to: ALIVPLLLRPPTPPS*CPTQGPCWVTHQTA
Trigger: GGCTGTTTGGTGTGTGACCCAGCAAGGGCCCTGTGTGGGACAGCAGGAGGGAGGCGTCGGGGGCCTTAGCAGAAGGGGAACAATGAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR GCA 90 bp CACTGTTGCCAGTGGAGGATGCACTTGGAGTGCCTTTTCCCACCTTaGCAGAGTGGACACTGTCCGTGGGCGCTCTGCGGGGCTGGCTGG +
Preference number: 1 (lower is better)
Translates to: HCCQWRMHLECLFPP*QSGHCPWALCGAGW
Trigger: CCAGCCAGCCCCGCAGAGCGCCCACGGACAGTGTCCACTCTGGCAAGGTGGGAAAAGGCACTCCAAGTGCATCCTCCACTGGCAACAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR GCA 90 bp GGTGACTGGCCTCAGGCAAGAGCCAAGATGCCACCTGCTCGTGTGTaGCCAGACTGCTGGCCACCCAGCCTCGTGGGTGAGCCTCATTTG +
Preference number: 1 (lower is better)
Translates to: GDWPQARAKMPPARV*PDCWPPSLVGEPHL
Trigger: CAAATGAGGCTCACCCACGAGGCTGGGTGGCCAGCAGTCTGGGCACACACGAGCAGGTGGCATCTTGGCTCTTGCCTGAGGCCAGTCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR GCA 90 bp GATAGAATTCAGGGCAGGGTGACTGGCCTCAGGCAAGAGCCAAGATaGCACCTGCTCGTGTGTGCCCAGACTGCTGGCCACCCAGCCTCG +
Preference number: 1 (lower is better)
Translates to: DRIQGRVTGLRQEPR*HLLVCAQTAGHPAS
Trigger: CGAGGCTGGGTGGCCAGCAGTCTGGGCACACACGAGCAGGTGGCATCTTGGCTCTTGCCTGAGGCCAGTCACCCTGCCCTGAATTCTATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR TCA 90 bp GAGTCTCCTTGGCCCGTCCAGGCCGTCACTGACCAAACGCTAGGCTaGCGACACGGTCCGACCCTTTGGACTAACACTGTGGATGCTGCC +
Preference number: 1 (lower is better)
Translates to: ESPWPVQAVTDQTLG*RHGPTLWTNTVDAA
Trigger: GGCAGCATCCACAGTGTTAGTCCAAAGGGTCGGACCGTGTCGTCAGCCTAGCGTTTGGTCAGTGACGGCCTGGACGGGCCAAGGAGACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR GCA 90 bp CGGGGGCAATTGTCCCACTGTTGCCAGTGGAGGATGCACTTGGAGTaGCTTTTCCCACCTTGCCAGAGTGGACACTGTCCGTGGGCGCTC +
Preference number: 1 (lower is better)
Translates to: RGQLSHCCQWRMHLE*LFPPCQSGHCPWAL
Trigger: GAGCGCCCACGGACAGTGTCCACTCTGGCAAGGTGGGAAAAGGCACTCCAAGTGCATCCTCCACTGGCAACAGTGGGACAATTGCCCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR GCA 90 bp CCACCCAGCCTCGTGGGTGAGCCTCATTTGTTCTTCTCTGCGTCCTaGTTTCTCCAGGAACCACGGGGCCCTCCAGACCTCTCGGAACGA +
Preference number: 1 (lower is better)
Translates to: PPSLVGEPHLFFSAS*FLQEPRGPPDLSER
Trigger: TCGTTCCGAGAGGTCTGGAGGGCCCCGTGGTTCCTGGAGAAAGCAGGACGCAGAGAAGAACAAATGAGGCTCACCCACGAGGCTGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR GCA 90 bp GTCACACACCAAACAGCCTCAAGGAAAAATTCAGCAGCTGAGCCGTaGGGGAGGCCTGGGCTCAAGCCCGGAGTCTCCTTGGCCCGTCCA +
Preference number: 1 (lower is better)
Translates to: VTHQTASRKNSAAEP*GRPGLKPGVSLARP
Trigger: TGGACGGGCCAAGGAGACTCCGGGCTTGAGCCCAGGCCTCCCGCACGGCTCAGCTGCTGAATTTTTCCTTGAGGCTGTTTGGTGTGTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR CCA 90 bp TGCCACCTGCTCGTGTGTGCCCAGACTGCTGGCCACCCAGCCTCGTaGGTGAGCCTCATTTGTTCTTCTCTGCGTCCTGCTTTCTCCAGG +
Preference number: 1 (lower is better)
Translates to: CHLLVCAQTAGHPAS*VSLICSSLRPAFSR
Trigger: CCTGGAGAAAGCAGGACGCAGAGAAGAACAAATGAGGCTCACCCACGAGGCTGGGTGGCCAGCAGTCTGGGCACACACGAGCAGGTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR TCA 90 bp ACCTGCTCGTGTGTGCCCAGACTGCTGGCCACCCAGCCTCGTGGGTaGGCCTCATTTGTTCTTCTCTGCGTCCTGCTTTCTCCAGGAACC +
Preference number: 1 (lower is better)
Translates to: TCSCVPRLLATQPRG*ASFVLLCVLLSPGT
Trigger: GGTTCCTGGAGAAAGCAGGACGCAGAGAAGAACAAATGAGGCTCACCCACGAGGCTGGGTGGCCAGCAGTCTGGGCACACACGAGCAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR GCA 90 bp CCTCAGGCAAGAGCCAAGATGCCACCTGCTCGTGTGTGCCCAGACTaGTGGCCACCCAGCCTCGTGGGTGAGCCTCATTTGTTCTTCTCT +
Preference number: 1 (lower is better)
Translates to: PQARAKMPPARVCPD*WPPSLVGEPHLFFS
Trigger: AGAGAAGAACAAATGAGGCTCACCCACGAGGCTGGGTGGCCAGCAGTCTGGGCACACACGAGCAGGTGGCATCTTGGCTCTTGCCTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR GCA 90 bp CTAAGGCCCCCGACGCCTCCCTCCTGCTGTCCCACACAGGGCCCTTaGTGGGTCACACACCAAACAGCCTCAAGGAAAAATTCAGCAGCT +
Preference number: 1 (lower is better)
Translates to: LRPPTPPSCCPTQGP*WVTHQTASRKNSAA
Trigger: AGCTGCTGAATTTTTCCTTGAGGCTGTTTGGTGTGTGACCCAGCAAGGGCCCTGTGTGGGACAGCAGGAGGGAGGCGTCGGGGGCCTTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR GCA 90 bp GCCAGGTCTTCCGTGATGCAGAAGTGCCTGAGATGGTTCATGAAATaGCCTCATTGTTCCCCTTCTGCTAAGGCCCCCGACGCCTCCCTC +
Preference number: 1 (lower is better)
Translates to: ARSSVMQKCLRWFMK*PHCSPSAKAPDASL
Trigger: GAGGGAGGCGTCGGGGGCCTTAGCAGAAGGGGAACAATGAGGGCATTTCATGAACCATCTCAGGCACTTCTGCATCACGGAAGACCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR CCA 90 bp ACGGCTGGGAGGGCCAGGTCTTCCGTGATGCAGAAGTGCCTGAGATaGTTCATGAAATGCCCTCATTGTTCCCCTTCTGCTAAGGCCCCC +
Preference number: 1 (lower is better)
Translates to: TAGRARSSVMQKCLR*FMKCPHCSPSAKAP
Trigger: GGGGGCCTTAGCAGAAGGGGAACAATGAGGGCATTTCATGAACCATCTCAGGCACTTCTGCATCACGGAAGACCTGGCCCTCCCAGCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR TCA 90 bp CGCTCCAGGGTGGCAGACAGGCTTGTGTTGCATATAAAAACAAGGTaGTGCTCTAAATATCTAAGAATATTGGTCCCCCAAAGTGACTCT +
Preference number: 1 (lower is better)
Translates to: RSRVADRLVLHIKTR*CSKYLRILVPQSDS
Trigger: AGAGTCACTTTGGGGGACCAATATTCTTAGATATTTAGAGCATCACCTTGTTTTTATATGCAACACAAGCCTGTCTGCCACCCTGGAGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR-3UTR GCA 90 bp GAGCATCCCCAGGACGGCTGGGAGGGCCAGGTCTTCCGTGATGCAGAAGTGCCTCCACCTGCTCGTGTGTaGCCAGACTGCTGGCCACCC +
Preference number: 2 (lower is better)
Translates to: EHPQDGWEGQVFRDAEVPPPARV*PDCWPP
Trigger: GGGTGGCCAGCAGTCTGGGCACACACGAGCAGGTGG...AGGCACTTCTGCATCACGGAAGACCTGGCCCTCCCAGCCGTCCTGGGGATGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR-3UTR CCA 90 bp CTCCTGCTGTCCCACACAGGGCCCTTGCTGGGTCACACACCAAACAGCCTCAAGAGTGGACACTGTCCGTaGGCGCTCTGCGGGGCTGGC +
Preference number: 2 (lower is better)
Translates to: LLLSHTGPLLGHTPNSLKSGHCP*ALCGAG
Trigger: GCCAGCCCCGCAGAGCGCCCACGGACAGTGTCCACT...CTTGAGGCTGTTTGGTGTGTGACCCAGCAAGGGCCCTGTGTGGGACAGCAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR CAA 90 bp GTGTGCCCAGACTGCTGGCCACCCAGCCTCGTGGGTGAGCCTCATTaGTTCTTCTCTGCGTCCTGCTTTCTCCAGGAACCACGGGGCCCT +
Preference number: 2 (lower is better)
Translates to: VCPDCWPPSLVGEPH*FFSASCFLQEPRGP
Trigger: AGGGCCCCGTGGTTCCTGGAGAAAGCAGGACGCAGAGAAGAACAAATGAGGCTCACCCACGAGGCTGGGTGGCCAGCAGTCTGGGCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR-3UTR CCA 90 bp GGATGCTGCCTGGCCTGCTGGTTTCCAGATCCCAAAGCCCCTTCCTTCCCCTTCCCCAGCAGTTGGACCTaGGTCTGCCAGGGTTGCCTG +
Preference number: 2 (lower is better)
Translates to: GCCLACWFPDPKAPSFPFPSSWT*VCQGCL
Trigger: CAGGCAACCCTGGCAGACCCAGGTCCAACTGCTGGG...GAAGGGGAAGGAAGGGGCTTTGGGATCTGGAAACCAGCAGGCCAGGCAGCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR CAA 90 bp GCTAAGGCCCCCGACGCCTCCCTCCTGCTGTCCCACACAGGGCCCTaGCTGGGTCACACACCAAACAGCCTCAAGGAAAAATTCAGCAGC +
Preference number: 2 (lower is better)
Translates to: AKAPDASLLLSHTGP*LGHTPNSLKEKFSS
Trigger: GCTGCTGAATTTTTCCTTGAGGCTGTTTGGTGTGTGACCCAGCAAGGGCCCTGTGTGGGACAGCAGGAGGGAGGCGTCGGGGGCCTTAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR-3UTR CCA 90 bp CTGTCCCACACAGGGCCCTTGCTGGGTCACACACCAAACAGCCTCAAGGAAAAAGTGTGCCCAGACTGCTaGCCACCCAGCCTCGTGGGT +
Preference number: 2 (lower is better)
Translates to: LSHTGPLLGHTPNSLKEKVCPDC*PPSLVG
Trigger: ACCCACGAGGCTGGGTGGCCAGCAGTCTGGGCACAC...TTTTTCCTTGAGGCTGTTTGGTGTGTGACCCAGCAAGGGCCCTGTGTGGGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR-3UTR GCA 90 bp TCCTCTCTGGTGGGGGATTCAGGTTTGTGCAAAGCACAAAGGAGCTTGTACCCATCCACAGAGCCCCGGTaGCGCCGTCGGGGGCAATTG +
Preference number: 2 (lower is better)
Translates to: SSLVGDSGLCKAQRSLYPSTEPR*RRRGQL
Trigger: CAATTGCCCCCGACGGCGGCACCGGGGCTCTGTGGA...TGGGTACAAGCTCCTTTGTGCTTTGCACAAACCTGAATCCCCCACCAGAGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR-3UTR GCA 90 bp TTCTTGGACCCCAGCAGTTGGACCTGGGTCTGCCAGGGTTGCCTGAGACATCAGAGCCAAGATGCCACCTaGTCGTGTGTGCCCAGACTG +
Preference number: 2 (lower is better)
Translates to: FLDPSSWTWVCQGCLRHQSQDAT*SCVPRL
Trigger: CAGTCTGGGCACACACGAGCAGGTGGCATCTTGGCT...CTGATGTCTCAGGCAACCCTGGCAGACCCAGGTCCAACTGCTGGGGTCCAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR-3UTR GCA 90 bp TCCTCTCTGGTGGGGGATTCAGGTTTGTGCAAAGCACAAAGGAGCTTGTACCCATCAGCAGCTGAGCCGTaGGGGAGGCCTGGGCTCAAG +
Preference number: 2 (lower is better)
Translates to: SSLVGDSGLCKAQRSLYPSAAEP*GRPGLK
Trigger: CTTGAGCCCAGGCCTCCCGCACGGCTCAGCTGCTGA...TGGGTACAAGCTCCTTTGTGCTTTGCACAAACCTGAATCCCCCACCAGAGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR-3UTR CCA 90 bp ACCCACCTGGGCCCCCGGCCAGCAGCACGGCCGGCTTTGATCGGAGCCCCTCTTCTATCGTTGCCAGTTTaGGATTCTAGACAAAAATTC +
Preference number: 2 (lower is better)
Translates to: THLGPRPAARPALIGAPLLSLPV*DSRQKF
Trigger: GAATTTTTGTCTAGAATCCCAAACTGGCAACGATAG...AAGAGGGGCTCCGATCAAAGCCGGCCGTGCTGCTGGCCGGGGGCCCAGGTGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR-3UTR GCA 90 bp TTCTTGGACCCCAGCAGTTGGACCTGGGTCTGCCAGGGTTGCCTGAGACATCAGAGGATGCACTTGGAGTaGCTTTTCCCACCTTGCCAG +
Preference number: 2 (lower is better)
Translates to: FLDPSSWTWVCQGCLRHQRMHLE*LFPPCQ
Trigger: CTGGCAAGGTGGGAAAAGGCACTCCAAGTGCATCCT...CTGATGTCTCAGGCAACCCTGGCAGACCCAGGTCCAACTGCTGGGGTCCAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR-3UTR CCA 90 bp GGATGCTGCCTGGCCTGCTGGTTTCCAGATCCCAAAGCCCCTTCCTTCCCCTTCAATTCTGTTCCTTGGTaGACATGTGGCAGTGCTGGG +
Preference number: 2 (lower is better)
Translates to: GCCLACWFPDPKAPSFPFNSVPW*TCGSAG
Trigger: CCCAGCACTGCCACATGTCCACCAAGGAACAGAATT...GAAGGGGAAGGAAGGGGCTTTGGGATCTGGAAACCAGCAGGCCAGGCAGCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR-3UTR CCA 90 bp CTCCTGCTGTCCCACACAGGGCCCTTGCTGGGTCACACACCAAACAGCCTCAAGAGTGGAGGATGCACTTaGAGTGCCTTTTCCCACCTT +
Preference number: 2 (lower is better)
Translates to: LLLSHTGPLLGHTPNSLKSGGCT*SAFSHL
Trigger: AAGGTGGGAAAAGGCACTCCAAGTGCATCCTCCACT...CTTGAGGCTGTTTGGTGTGTGACCCAGCAAGGGCCCTGTGTGGGACAGCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR-3UTR CCA 90 bp CTCATATACAATAAGCTGCTTCTCACTTCTCACCCTGAAGCCAACAGCTACGACCTCTGCGGGGCTGGCTaGGACAGCCGGCTGAGAAGC +
Preference number: 2 (lower is better)
Translates to: LIYNKLLLTSHPEANSYDLCGAG*DSRLRS
Trigger: GCTTCTCAGCCGGCTGTCCCAGCCAGCCCCGCAGAG...GTCGTAGCTGTTGGCTTCAGGGTGAGAAGTGAGAAGCAGCTTATTGTATATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR-3UTR CCA 90 bp TGCCTGAGATGGTTCATGAAATGCCCTCATTGTTCCCCTTCTGCTAAGGCCCCCACACAGGGCCCTTGCTaGGTCACACACCAAACAGCC +
Preference number: 2 (lower is better)
Translates to: CLRWFMKCPHCSPSAKAPTQGPC*VTHQTA
Trigger: GGCTGTTTGGTGTGTGACCCAGCAAGGGCCCTGTGT...GGGGGCCTTAGCAGAAGGGGAACAATGAGGGCATTTCATGAACCATCTCAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR-3UTR GCA 90 bp TCCTCTCTGGTGGGGGATTCAGGTTTGTGCAAAGCACAAAGGAGCTTGTACCCACCCCAAAGTGACTCTTaGTGCCTCCCCCTTCCTCAC +
Preference number: 2 (lower is better)
Translates to: SSLVGDSGLCKAQRSLYPPQSDS*CLPLPH
Trigger: GTGAGGAAGGGGGAGGCAGCAAGAGTCACTTTGGGG...TGGGTACAAGCTCCTTTGTGCTTTGCACAAACCTGAATCCCCCACCAGAGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR-3UTR CCA 90 bp GTCTTCCGTGATGCAGAAGTGCCTGAGATGGTTCATGAAATGCCCTCATTGTTCCCCACCTTGCCAGAGTaGACACTGTCCGTGGGCGCT +
Preference number: 2 (lower is better)
Translates to: VFRDAEVPEMVHEMPSLFPTLPE*TLSVGA
Trigger: AGCGCCCACGGACAGTGTCCACTCTGGCAAGGTGGG...GAACAATGAGGGCATTTCATGAACCATCTCAGGCACTTCTGCATCACGGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR-3UTR TCA 90 bp GTCTTCCGTGATGCAGAAGTGCCTGAGATGGTTCATGAAATGCCCTCATTGTTCCCCCGAGGGAGGGGCTaGAGGTGGAGTAGGATAGAA +
Preference number: 2 (lower is better)
Translates to: VFRDAEVPEMVHEMPSLFPRGRG*RWSRIE
Trigger: TTCTATCCTACTCCACCTTCAGCCCCTCCCTCGGGG...GAACAATGAGGGCATTTCATGAACCATCTCAGGCACTTCTGCATCACGGAAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR-3UTR TCA 90 bp TGCCTGAGATGGTTCATGAAATGCCCTCATTGTTCCCCTTCTGCTAAGGCCCCCAAACTGCACCTTCTGTaGGAACCTCATTGCCCGGGA +
Preference number: 2 (lower is better)
Translates to: CLRWFMKCPHCSPSAKAPKLHLL*EPHCPG
Trigger: TCCCGGGCAATGAGGTTCTCACAGAAGGTGCAGTTT...GGGGGCCTTAGCAGAAGGGGAACAATGAGGGCATTTCATGAACCATCTCAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR-3UTR GCA 90 bp CTGTCCCACACAGGGCCCTTGCTGGGTCACACACCAAACAGCCTCAAGGAAAAACAATTGTCCCACTGTTaGCAGTGGAGGATGCACTTG +
Preference number: 2 (lower is better)
Translates to: LSHTGPLLGHTPNSLKEKQLSHC*QWRMHL
Trigger: CAAGTGCATCCTCCACTGGCAACAGTGGGACAATTG...TTTTTCCTTGAGGCTGTTTGGTGTGTGACCCAGCAAGGGCCCTGTGTGGGACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR-3UTR CCA 90 bp CTCATATACAATAAGCTGCTTCTCACTTCTCACCCTGAAGCCAACAGCTACGACGACATGTGGCAGTGCTaGGTGCTGACGCCCTGGGTC +
Preference number: 2 (lower is better)
Translates to: LIYNKLLLTSHPEANSYDDMWQC*VLTPWV
Trigger: GACCCAGGGCGTCAGCACCCAGCACTGCCACATGTC...GTCGTAGCTGTTGGCTTCAGGGTGAGAAGTGAGAAGCAGCTTATTGTATATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR-3UTR GCA 90 bp TCATATACAATAAGCTGCTTCTCACTTCTCACCCTGAAGCCAACAGCTACGACAGTGGACATGTGGCAGTaGTGGGTGCTGACGCCCTGG +
Preference number: 2 (lower is better)
Translates to: SYTISCFSLLTLKPTATTVDMWQ*WVLTPW
Trigger: CCAGGGCGTCAGCACCCAGCACTGCCACATGTCCAC...TGTCGTAGCTGTTGGCTTCAGGGTGAGAAGTGAGAAGCAGCTTATTGTATATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR-3UTR CCA 90 bp TATACAATAAGCTGCTTCTCACTTCTCACCCTGAAGCCAACAGCTACGACAGCATCCTTGGTGGACATGTaGCAGTGCTGGGTGCTGACG +
Preference number: 2 (lower is better)
Translates to: YTISCFSLLTLKPTATTASLVDM*QCWVLT
Trigger: CGTCAGCACCCAGCACTGCCACATGTCCACCAAGGA...TGCTGTCGTAGCTGTTGGCTTCAGGGTGAGAAGTGAGAAGCAGCTTATTGTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR-3UTR GCA 90 bp AACTGCACCTTCTGTGAGAACCTCATTGCCCGGGATGAAGTTCTAGATTTCAGCTTCTTCTCTGCGTCCTaGTTTCTCCAGGAACCACGG +
Preference number: 2 (lower is better)
Translates to: NCTFCENLIARDEVLDFSFFSAS*FLQEPR
Trigger: CCGTGGTTCCTGGAGAAAGCAGGACGCAGAGAAGAA...GCTGAAATCTAGAACTTCATCCCGGGCAATGAGGTTCTCACAGAAGGTGCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR-3UTR GCA 90 bp TATACAATAAGCTGCTTCTCACTTCTCACCCTGAAGCCAACAGCTACGACAGCAAGTTGGACCTGGGTCTaGCAGGGTTGCCTGAGACAT +
Preference number: 2 (lower is better)
Translates to: YTISCFSLLTLKPTATTASWTWV*QGCLRH
Trigger: ATGTCTCAGGCAACCCTGGCAGACCCAGGTCCAACT...TGCTGTCGTAGCTGTTGGCTTCAGGGTGAGAAGTGAGAAGCAGCTTATTGTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR-3UTR TCA 90 bp ATTTCAGCCTCTGATGATCTTTCCTTTGGTAATTGGTTCTTGGACCCCAGCAGTACCCAGCCTCGTGGGTaGGCCTCATTTGTTCTTCTC +
Preference number: 2 (lower is better)
Translates to: ISASDDLSFGNWFLDPSSTQPRG*ASFVLL
Trigger: GAGAAGAACAAATGAGGCTCACCCACGAGGCTGGGT...ACTGCTGGGGTCCAAGAACCAATTACCAAAGGAAAGATCATCAGAGGCTGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR-3UTR GCA 90 bp CTCATATACAATAAGCTGCTTCTCACTTCTCACCCTGAAGCCAACAGCTACGACTCATTTGTTCTTCTCTaGGTCCTGCTTTCTCCAGGA +
Preference number: 2 (lower is better)
Translates to: LIYNKLLLTSHPEANSYDSFVLL*VLLSPG
Trigger: TCCTGGAGAAAGCAGGACGCAGAGAAGAACAAATGA...GTCGTAGCTGTTGGCTTCAGGGTGAGAAGTGAGAAGCAGCTTATTGTATATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR TCA 72 bp CCCACCTGGGCCCCCGGCCAGCAGCACGGCCGGCTTTaGTCGGAGCCCCTCTTCCCTGTCCGGGCTCGCCTG +
Preference number: 3 (lower is better)
Translates to: PTWAPGQQHGRL*SEPLFPVRARL
Trigger: CAGGCGAGCCCGGACAGGGAAGAGGGGCTCCGATCAAAGCCGGCCGTGCTGCTGGCCGGGGGCCCAGGTGGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR CCA 72 bp AGTGGACACTGTCCGTGGGCGCTCTGCGGGGCTGGCTaGGACAGCCGGCTGAGAAGCGCCACCCCCTCCCGC +
Preference number: 3 (lower is better)
Translates to: SGHCPWALCGAG*DSRLRSATPSR
Trigger: GCGGGAGGGGGTGGCGCTTCTCAGCCGGCTGTCCCAGCCAGCCCCGCAGAGCGCCCACGGACAGTGTCCACT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR TCA 72 bp AAGCCCGGAGTCTCCTTGGCCCGTCCAGGCCGTCACTaGCCAAACGCTAGGCTGACGACACGGTCCGACCCT +
Preference number: 3 (lower is better)
Translates to: KPGVSLARPGRH*PNARLTTRSDP
Trigger: AGGGTCGGACCGTGTCGTCAGCCTAGCGTTTGGTCAGTGACGGCCTGGACGGGCCAAGGAGACTCCGGGCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR GCA 72 bp ACCTCTCGGAACGATCGGGATTCCACAGAGCCCCGGTaGCGCCGTCGGGGGCAATTGTCCCACTGTTGCCAG +
Preference number: 3 (lower is better)
Translates to: TSRNDRDSTEPR*RRRGQLSHCCQ
Trigger: CTGGCAACAGTGGGACAATTGCCCCCGACGGCGGCACCGGGGCTCTGTGGAATCCCGATCGTTCCGAGAGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR GCA 72 bp CCTCAGGCAAGAGCCAAGATGCCACCTGCTCGTGTGTaGCCAGACTGCTGGCCACCCAGCCTCGTGGGTGAG +
Preference number: 3 (lower is better)
Translates to: PQARAKMPPARV*PDCWPPSLVGE
Trigger: CTCACCCACGAGGCTGGGTGGCCAGCAGTCTGGGCACACACGAGCAGGTGGCATCTTGGCTCTTGCCTGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR TCA 72 bp ACCTGGGTCTGCCAGGGTTGCCTGAGACATCAGGAATaGGAGGCGCTACCCCCGAGGGAGGGGCTGAAGGTG +
Preference number: 3 (lower is better)
Translates to: TWVCQGCLRHQE*EALPPREGLKV
Trigger: CACCTTCAGCCCCTCCCTCGGGGGTAGCGCCTCTCATTCCTGATGTCTCAGGCAACCCTGGCAGACCCAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR TCA 72 bp ACCCCAGCAGTTGGACCTGGGTCTGCCAGGGTTGCCTaGGACATCAGGAATGAGAGGCGCTACCCCCGAGGG +
Preference number: 3 (lower is better)
Translates to: TPAVGPGSARVA*DIRNERRYPRG
Trigger: CCCTCGGGGGTAGCGCCTCTCATTCCTGATGTCTCAGGCAACCCTGGCAGACCCAGGTCCAACTGCTGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR CCA 72 bp GATGCACTTGGAGTGCCTTTTCCCACCTTGCCAGAGTaGACACTGTCCGTGGGCGCTCTGCGGGGCTGGCTG +
Preference number: 3 (lower is better)
Translates to: DALGVPFPTLPE*TLSVGALRGWL
Trigger: CAGCCAGCCCCGCAGAGCGCCCACGGACAGTGTCCACTCTGGCAAGGTGGGAAAAGGCACTCCAAGTGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR GCA 72 bp CAGTGGAGGATGCACTTGGAGTGCCTTTTCCCACCTTaGCAGAGTGGACACTGTCCGTGGGCGCTCTGCGGG +
Preference number: 3 (lower is better)
Translates to: QWRMHLECLFPP*QSGHCPWALCG
Trigger: CCCGCAGAGCGCCCACGGACAGTGTCCACTCTGGCAAGGTGGGAAAAGGCACTCCAAGTGCATCCTCCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR TCA 72 bp TGGCCCGTCCAGGCCGTCACTGACCAAACGCTAGGCTaGCGACACGGTCCGACCCTTTGGACTAACACTGTG +
Preference number: 3 (lower is better)
Translates to: WPVQAVTDQTLG*RHGPTLWTNTV
Trigger: CACAGTGTTAGTCCAAAGGGTCGGACCGTGTCGTCAGCCTAGCGTTTGGTCAGTGACGGCCTGGACGGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR CCA 72 bp TGCCGCCGTCGGGGGCAATTGTCCCACTGTTGCCAGTaGAGGATGCACTTGGAGTGCCTTTTCCCACCTTGC +
Preference number: 3 (lower is better)
Translates to: CRRRGQLSHCCQ*RMHLECLFPPC
Trigger: GCAAGGTGGGAAAAGGCACTCCAAGTGCATCCTCCACTGGCAACAGTGGGACAATTGCCCCCGACGGCGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR-3UTR CAA 90 bp CAGGACGGCTGGGAGGGCCAGGTCTTCCGTGATGCAGAAGTGCCTGAGATGGTTGCAAGGCCAGGTCCCTaGGAGACTATCGTTGCCAGT +
Preference number: 3 (lower is better)
Translates to: QDGWEGQVFRDAEVPEMVARPGP*ETIVAS
Trigger: ACTGGCAACGATAGTCTCCAAGGGACCTGGCCTTGC...AACCATCTCAGGCACTTCTGCATCACGGAAGACCTGGCCCTCCCAGCCGTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR GCA 72 bp CTCGTGGGTGAGCCTCATTTGTTCTTCTCTGCGTCCTaGTTTCTCCAGGAACCACGGGGCCCTCCAGACCTC +
Preference number: 3 (lower is better)
Translates to: LVGEPHLFFSAS*FLQEPRGPPDL
Trigger: GAGGTCTGGAGGGCCCCGTGGTTCCTGGAGAAAGCAGGACGCAGAGAAGAACAAATGAGGCTCACCCACGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR GCA 72 bp CAAACAGCCTCAAGGAAAAATTCAGCAGCTGAGCCGTaGGGGAGGCCTGGGCTCAAGCCCGGAGTCTCCTTG +
Preference number: 3 (lower is better)
Translates to: QTASRKNSAAEP*GRPGLKPGVSL
Trigger: CAAGGAGACTCCGGGCTTGAGCCCAGGCCTCCCGCACGGCTCAGCTGCTGAATTTTTCCTTGAGGCTGTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR TCA 72 bp TGTGTGCCCAGACTGCTGGCCACCCAGCCTCGTGGGTaGGCCTCATTTGTTCTTCTCTGCGTCCTGCTTTCT +
Preference number: 3 (lower is better)
Translates to: CVPRLLATQPRG*ASFVLLCVLLS
Trigger: AGAAAGCAGGACGCAGAGAAGAACAAATGAGGCTCACCCACGAGGCTGGGTGGCCAGCAGTCTGGGCACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR GCA 72 bp GTCGGGGGCAATTGTCCCACTGTTGCCAGTGGAGGATaGACTTGGAGTGCCTTTTCCCACCTTGCCAGAGTG +
Preference number: 3 (lower is better)
Translates to: VGGNCPTVASGG*TWSAFSHLARV
Trigger: CACTCTGGCAAGGTGGGAAAAGGCACTCCAAGTGCATCCTCCACTGGCAACAGTGGGACAATTGCCCCCGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR-3UTR CAA 90 bp CTGTCCCACACAGGGCCCTTGCTGGGTCACACACCAAACAGCCTCAAGGAAAAACTGGGTCTGCCAGGGTaGCCTGAGACATCAGGAATG +
Preference number: 3 (lower is better)
Translates to: LSHTGPLLGHTPNSLKEKLGLPG*PETSGM
Trigger: CATTCCTGATGTCTCAGGCAACCCTGGCAGACCCAG...TTTTTCCTTGAGGCTGTTTGGTGTGTGACCCAGCAAGGGCCCTGTGTGGGACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR-3UTR CAA 90 bp CTCCTGCTGTCCCACACAGGGCCCTTGCTGGGTCACACACCAAACAGCCTCAAGTTTGGTAATTGGTTCTaGGACCCCAGCAGTTGGACC +
Preference number: 3 (lower is better)
Translates to: LLLSHTGPLLGHTPNSLKFGNWF*DPSSWT
Trigger: GGTCCAACTGCTGGGGTCCAAGAACCAATTACCAAA...CTTGAGGCTGTTTGGTGTGTGACCCAGCAAGGGCCCTGTGTGGGACAGCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR GCA 72 bp TTGTCCCACTGTTGCCAGTGGAGGATGCACTTGGAGTaGCTTTTCCCACCTTGCCAGAGTGGACACTGTCCG +
Preference number: 3 (lower is better)
Translates to: LSHCCQWRMHLE*LFPPCQSGHCP
Trigger: CGGACAGTGTCCACTCTGGCAAGGTGGGAAAAGGCACTCCAAGTGCATCCTCCACTGGCAACAGTGGGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR GCA 72 bp TATCTAAGAATATTGGTCCCCCAAAGTGACTCTTGCTaGCTCCCCCTTCCTCACCGTCCCGCCGACACCTTG +
Preference number: 3 (lower is better)
Translates to: YLRILVPQSDSC*LPLPHRPADTL
Trigger: CAAGGTGTCGGCGGGACGGTGAGGAAGGGGGAGGCAGCAAGAGTCACTTTGGGGGACCAATATTCTTAGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR GCA 72 bp CACCCTCGGGGCCTGGCTCCCTCATATACAATAAGCTaGTTCTCACTTCTCACCCTGAAGCCAACAGCTACG +
Preference number: 3 (lower is better)
Translates to: HPRGLAPSYTIS*FSLLTLKPTAT
Trigger: CGTAGCTGTTGGCTTCAGGGTGAGAAGTGAGAAGCAGCTTATTGTATATGAGGGAGCCAGGCCCCGAGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR-3UTR CAA 90 bp CTGTCCCACACAGGGCCCTTGCTGGGTCACACACCAAACAGCCTCAAGGAAAAAGCAATTGTCCCACTGTaGCCAGTGGAGGATGCACTT +
Preference number: 3 (lower is better)
Translates to: LSHTGPLLGHTPNSLKEKAIVPL*PVEDAL
Trigger: AAGTGCATCCTCCACTGGCAACAGTGGGACAATTGC...TTTTTCCTTGAGGCTGTTTGGTGTGTGACCCAGCAAGGGCCCTGTGTGGGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR-3UTR CAA 90 bp TATACAATAAGCTGCTTCTCACTTCTCACCCTGAAGCCAACAGCTACGACAGCACGCCGTCGGGGGCAATaGTCCCACTGTTGCCAGTGG +
Preference number: 3 (lower is better)
Translates to: YTISCFSLLTLKPTATTARRRGQ*SHCCQW
Trigger: CCACTGGCAACAGTGGGACAATTGCCCCCGACGGCG...TGCTGTCGTAGCTGTTGGCTTCAGGGTGAGAAGTGAGAAGCAGCTTATTGTATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR GCA 72 bp AAATATCTAAGAATATTGGTCCCCCAAAGTGACTCTTaGTGCCTCCCCCTTCCTCACCGTCCCGCCGACACC +
Preference number: 3 (lower is better)
Translates to: KYLRILVPQSDS*CLPLPHRPADT
Trigger: GGTGTCGGCGGGACGGTGAGGAAGGGGGAGGCAGCAAGAGTCACTTTGGGGGACCAATATTCTTAGATATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR GCA 72 bp TCCGTGATGCAGAAGTGCCTGAGATGGTTCATGAAATaGCCTCATTGTTCCCCTTCTGCTAAGGCCCCCGAC +
Preference number: 3 (lower is better)
Translates to: SVMQKCLRWFMK*PHCSPSAKAPD
Trigger: GTCGGGGGCCTTAGCAGAAGGGGAACAATGAGGGCATTTCATGAACCATCTCAGGCACTTCTGCATCACGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR CCA 72 bp CTTTCCTTTGGTAATTGGTTCTTGGACCCCAGCAGTTaGACCTGGGTCTGCCAGGGTTGCCTGAGACATCAG +
Preference number: 3 (lower is better)
Translates to: LSFGNWFLDPSS*TWVCQGCLRHQ
Trigger: CTGATGTCTCAGGCAACCCTGGCAGACCCAGGTCCAACTGCTGGGGTCCAAGAACCAATTACCAAAGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR CCA 72 bp CAGCCTCTGATGATCTTTCCTTTGGTAATTGGTTCTTaGACCCCAGCAGTTGGACCTGGGTCTGCCAGGGTT +
Preference number: 3 (lower is better)
Translates to: QPLMIFPLVIGS*TPAVGPGSARV
Trigger: AACCCTGGCAGACCCAGGTCCAACTGCTGGGGTCCAAGAACCAATTACCAAAGGAAAGATCATCAGAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR CCA 72 bp AGGGCCAGGTCTTCCGTGATGCAGAAGTGCCTGAGATaGTTCATGAAATGCCCTCATTGTTCCCCTTCTGCT +
Preference number: 3 (lower is better)
Translates to: RARSSVMQKCLR*FMKCPHCSPSA
Trigger: AGCAGAAGGGGAACAATGAGGGCATTTCATGAACCATCTCAGGCACTTCTGCATCACGGAAGACCTGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR CCA 72 bp TCAGCGTTTCTGGCTCCTCACACACATCCTCTCTGGTaGGGGATTCAGGTTTGTGCAAAGCACAAAGGAGCT +
Preference number: 3 (lower is better)
Translates to: SAFLAPHTHPLW*GIQVCAKHKGA
Trigger: AGCTCCTTTGTGCTTTGCACAAACCTGAATCCCCCACCAGAGAGGATGTGTGTGAGGAGCCAGAAACGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR CCA 72 bp GATTCAGCGTTTCTGGCTCCTCACACACATCCTCTCTaGTGGGGGATTCAGGTTTGTGCAAAGCACAAAGGA +
Preference number: 3 (lower is better)
Translates to: DSAFLAPHTHPL*WGIQVCAKHKG
Trigger: TCCTTTGTGCTTTGCACAAACCTGAATCCCCCACCAGAGAGGATGTGTGTGAGGAGCCAGAAACGCTGAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR-3UTR CAA 90 bp TATACAATAAGCTGCTTCTCACTTCTCACCCTGAAGCCAACAGCTACGACAGCAAATAAATTCTGTTCCTaGGTGGACATGTGGCAGTGC +
Preference number: 3 (lower is better)
Translates to: YTISCFSLLTLKPTATTANKFCS*VDMWQC
Trigger: GCACTGCCACATGTCCACCAAGGAACAGAATTTATT...TGCTGTCGTAGCTGTTGGCTTCAGGGTGAGAAGTGAGAAGCAGCTTATTGTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR CCA 72 bp CAAGGCCAGGTCCCTTGGAGACTATCGTTGCCAGTTTaGGATTCTAGACAAAAATTCTATCACTTTGTTTTT +
Preference number: 3 (lower is better)
Translates to: QGQVPWRLSLPV*DSRQKFYHFVF
Trigger: AAAAACAAAGTGATAGAATTTTTGTCTAGAATCCCAAACTGGCAACGATAGTCTCCAAGGGACCTGGCCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR-3UTR CAA 90 bp TCATATACAATAAGCTGCTTCTCACTTCTCACCCTGAAGCCAACAGCTACGACAAAATATCTAAGAATATaGGTCCCCCAAAGTGACTCT +
Preference number: 3 (lower is better)
Translates to: SYTISCFSLLTLKPTATTKYLRI*VPQSDS
Trigger: AGAGTCACTTTGGGGGACCAATATTCTTAGATATTT...TGTCGTAGCTGTTGGCTTCAGGGTGAGAAGTGAGAAGCAGCTTATTGTATATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR TCA 72 bp GTGGCAGACAGGCTTGTGTTGCATATAAAAACAAGGTaGTGCTCTAAATATCTAAGAATATTGGTCCCCCAA +
Preference number: 3 (lower is better)
Translates to: VADRLVLHIKTR*CSKYLRILVPQ
Trigger: TTGGGGGACCAATATTCTTAGATATTTAGAGCATCACCTTGTTTTTATATGCAACACAAGCCTGTCTGCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR CAA 72 bp ACCCACCTGGGCCCCCGGCCAGCAGCACGGCCGGCTTaGATCGGAGCCCCTCTTCCCTGTCCGGGCTCGCCT +
Preference number: 4 (lower is better)
Translates to: THLGPRPAARPA*IGAPLPCPGSP
Trigger: AGGCGAGCCCGGACAGGGAAGAGGGGCTCCGATCAAAGCCGGCCGTGCTGCTGGCCGGGGGCCCAGGTGGGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp CAGACCTCTCGGAACGATCGGGATTCCACAGAGCCCCGGTGCCGCCGTCGGGGGCGCAAGCAACCGTGGTaGTGCCCGGCAGCCCCGCGC +
Preference number: 4 (lower is better)
Translates to: QTSRNDRDSTEPRCRRRGRKQPW*CPAAPR
Trigger: GCGCGGGGCTGCCGGGCAGCACCACGGTTGCTTGCG...CCCCCGACGGCGGCACCGGGGCTCTGTGGAATCCCGATCGTTCCGAGAGGTCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR TCA 90 bp CAGACCTCTCGGAACGATCGGGATTCCACAGAGCCCCGGTGCCGCCGTCGGGGGCCCAGGGGTTGCCGTTaGGGCGGAGGAACTCCAGGG +
Preference number: 4 (lower is better)
Translates to: QTSRNDRDSTEPRCRRRGPRGCR*GGGTPG
Trigger: CCCTGGAGTTCCTCCGCCTCAACGGCAACCCCTGGG...CCCCCGACGGCGGCACCGGGGCTCTGTGGAATCCCGATCGTTCCGAGAGGTCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp CCAGAGTGGACACTGTCCGTGGGCGCTCTGCGGGGCTGGCTGGGACAGCCGGCTGGGACGCTGGTCCCGTaGAGTTCCGGAAGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: PEWTLSVGALRGWLGQPAGTLVP*SSGSPR
Trigger: CCGAGGACTTCCGGAACTGCACGGGACCAGCGTCCC...AGCCGGCTGTCCCAGCCAGCCCCGCAGAGCGCCCACGGACAGTGTCCACTCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp CCAGAGTGGACACTGTCCGTGGGCGCTCTGCGGGGCTGGCTGGGACAGCCGGCTGTGAGTGGTGTTCCTTaGGGGCGGCCCTGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: PEWTLSVGALRGWLGQPAVSGVP*GRPCRW
Trigger: CCACCGACAGGGCCGCCCGCAAGGAACACCACTCAC...AGCCGGCTGTCCCAGCCAGCCCCGCAGAGCGCCCACGGACAGTGTCCACTCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp CTGGGACAGCCGGCTGAGAAGCGCCACCCCCTCCCGCCTAGGGCTGTACACTTTCGTGCGGGTGGCCCTTaGTCCTGGTGGGGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: LGQPAEKRHPLPPRAVHFRAGGP*SWWGRG
Trigger: CCCACGGCCCCACCAGGAGCAAGGGCCACCCGCACG...AAAGTGTACAGCCCTAGGCGGGAGGGGGTGGCGCTTCTCAGCCGGCTGTCCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp CAGACCTCTCGGAACGATCGGGATTCCACAGAGCCCCGGTGCCGCCGTCGGGGGGCACACACAGTCCCGTaGGCAGCCACCACCCAGGGG +
Preference number: 4 (lower is better)
Translates to: QTSRNDRDSTEPRCRRRGAHTVP*AATTQG
Trigger: CCCCTGGGTGGTGGCTGCCCACGGGACTGTGTGTGC...CCCCCGACGGCGGCACCGGGGCTCTGTGGAATCCCGATCGTTCCGAGAGGTCTG
70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR TCA 90 bp TGCCGCCGTCGGGGGCAATTGTCCCACTGTTGCCAGTGGAGGATGCACTTGGAGCCCGCAGGGGCATGGTaGGCTCCAGCCCCGCGCCGA +
Preference number: 4 (lower is better)
Translates to: CRRRGQLSHCCQWRMHLEPAGAW*APAPRR
Trigger: TCGGCGCGGGGCTGGAGCTCACCATGCCCCTGCGGG...CTCCAAGTGCATCCTCCACTGGCAACAGTGGGACAATTGCCCCCGACGGCGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp AACCACGGGGCCCTCCAGACCTCTCGGAACGATCGGGATTCCACAGAGCCCCGGGTCCCGCCGACACCTTaGCCCAGGCCCTTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: NHGALQTSRNDRDSTEPRVPPTP*PRPLAR
Trigger: CCTTGCCAAGGGCCTGGGGCAAGGTGTCGGCGGGAC...CCGGGGCTCTGTGGAATCCCGATCGTTCCGAGAGGTCTGGAGGGCCCCGTGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp CTGGGACAGCCGGCTGAGAAGCGCCACCCCCTCCCGCCTAGGGCTGTACACTTTCTCTGCGGGGCTGGCTaGGACAGCCGGCTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: LGQPAEKRHPLPPRAVHFLCGAG*DSRLRS
Trigger: GCTTCTCAGCCGGCTGTCCCAGCCAGCCCCGCAGAG...AAAGTGTACAGCCCTAGGCGGGAGGGGGTGGCGCTTCTCAGCCGGCTGTCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp AACCACGGGGCCCTCCAGACCTCTCGGAACGATCGGGATTCCACAGAGCCCCGGAGGGGACAGCGGAGCTaGAGCCCCGGAACCTCTGCA +
Preference number: 4 (lower is better)
Translates to: NHGALQTSRNDRDSTEPRRGQRS*SPGTSA
Trigger: TGCAGAGGTTCCGGGGCTCCAGCTCCGCTGTCCCCT...CCGGGGCTCTGTGGAATCCCGATCGTTCCGAGAGGTCTGGAGGGCCCCGTGGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR TCA 90 bp GTTCTTGGACCCCAGCAGTTGGACCTGGGTCTGCCAGGGTTGCCTGAGACATCAGCTGGGACAGCCGGCTaGGAAGCGCCACCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: VLGPQQLDLGLPGLPETSAGTAG*EAPPPP
Trigger: GGGAGGGGGTGGCGCTTCTCAGCCGGCTGTCCCAGC...TGATGTCTCAGGCAACCCTGGCAGACCCAGGTCCAACTGCTGGGGTCCAAGAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp GAGCATCCCCAGGACGGCTGGGAGGGCCAGGTCTTCCGTGATGCAGAAGTGCCTCGCTGTCCACGGGGATaGCCTCCGGGATGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: EHPQDGWEGQVFRDAEVPRCPRG*PPGWLQ
Trigger: TTGCAGCCATCCCGGAGGGCATCCCCGTGGACAGCG...AGGCACTTCTGCATCACGGAAGACCTGGCCCTCCCAGCCGTCCTGGGGATGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp AACCACGGGGCCCTCCAGACCTCTCGGAACGATCGGGATTCCACAGAGCCCCGGAGAGGGTGGTCAGCCTaGGGAGGTCGTGGAACGCCT +
Preference number: 4 (lower is better)
Translates to: NHGALQTSRNDRDSTEPRRGWSA*GGRGTP
Trigger: AGGCGTTCCACGACCTCCGCAGGCTGACCACCCTCT...CCGGGGCTCTGTGGAATCCCGATCGTTCCGAGAGGTCTGGAGGGCCCCGTGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp CTTGGACCCCAGCAGTTGGACCTGGGTCTGCCAGGGTTGCCTGAGACATCAGGATGTCCGTGGGCGCTCTaGGGGGCTGGCTGGGACAGC +
Preference number: 4 (lower is better)
Translates to: LGPQQLDLGLPGLPETSGCPWAL*GAGWDS
Trigger: GCTGTCCCAGCCAGCCCCGCAGAGCGCCCACGGACA...TCCTGATGTCTCAGGCAACCCTGGCAGACCCAGGTCCAACTGCTGGGGTCCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp GGATGCTGCCTGGCCTGCTGGTTTCCAGATCCCAAAGCCCCTTCCTTCCCCTTCGGGCCGTGGGGTGAGTaGTGTTCCTTGCGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: GCCLACWFPDPKAPSFPFGPWGE*CSLRAA
Trigger: GGCCGCCCGCAAGGAACACCACTCACCCCACGGCCC...GAAGGGGAAGGAAGGGGCTTTGGGATCTGGAAACCAGCAGGCCAGGCAGCATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR TCA 90 bp TTCTTGGACCCCAGCAGTTGGACCTGGGTCTGCCAGGGTTGCCTGAGACATCAGTGTGCGCCTGGCAGCTaGCCGTCATGGGCGCCGGGT +
Preference number: 4 (lower is better)
Translates to: FLDPSSWTWVCQGCLRHQCAPGS*PSWAPG
Trigger: ACCCGGCGCCCATGACGGTCAGCTGCCAGGCGCACA...CTGATGTCTCAGGCAACCCTGGCAGACCCAGGTCCAACTGCTGGGGTCCAAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR TCA 90 bp GGATGCTGCCTGGCCTGCTGGTTTCCAGATCCCAAAGCCCCTTCCTTCCCCTTCCCTGCTTCTGACCCCTaGGTCCGGCCTCCCGAGCCT +
Preference number: 4 (lower is better)
Translates to: GCCLACWFPDPKAPSFPFPASDP*VRPPEP
Trigger: AGGCTCGGGAGGCCGGACTCAGGGGTCAGAAGCAGG...GAAGGGGAAGGAAGGGGCTTTGGGATCTGGAAACCAGCAGGCCAGGCAGCATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp TGCCGCCGTCGGGGGCAATTGTCCCACTGTTGCCAGTGGAGGATGCACTTGGAGTCCCGAGCCTCTGCCTaGACCCTGAGCATCCCCAGG +
Preference number: 4 (lower is better)
Translates to: CRRRGQLSHCCQWRMHLESRASA*TLSIPR
Trigger: CCTGGGGATGCTCAGGGTGCAGGCAGAGGCTCGGGA...CTCCAAGTGCATCCTCCACTGGCAACAGTGGGACAATTGCCCCCGACGGCGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp CTCCTGCTGTCCCACACAGGGCCCTTGCTGGGTCACACACCAAACAGCCTCAAGGGCCCTTGCTCCTGGTaGGGCCGTGGGGTGAGTGGT +
Preference number: 4 (lower is better)
Translates to: LLLSHTGPLLGHTPNSLKGPCSW*GRGVSG
Trigger: ACCACTCACCCCACGGCCCCACCAGGAGCAAGGGCC...CTTGAGGCTGTTTGGTGTGTGACCCAGCAAGGGCCCTGTGTGGGACAGCAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp GGGTCCAGACGTCCAGACAGCAGCCGAAGGCTCTACCAGCCTTTTCCTGAAACCGCCGTGCGGGAGGCCTaGGCTCAAGCCCGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: GSRRPDSSRRLYQPFPETAVREA*AQARSL
Trigger: GAGACTCCGGGCTTGAGCCCAGGCCTCCCGCACGGC...GGTTTCAGGAAAAGGCTGGTAGAGCCTTCGGCTGCTGTCTGGACGTCTGGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp CTTGGACCCCAGCAGTTGGACCTGGGTCTGCCAGGGTTGCCTGAGACATCAGGAGAGCTTGTACCCACCTaGGCCCCCGGCCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: LGPQQLDLGLPGLPETSGELVPT*APGQQH
Trigger: GTGCTGCTGGCCGGGGGCCCAGGTGGGTACAAGCTC...TCCTGATGTCTCAGGCAACCCTGGCAGACCCAGGTCCAACTGCTGGGGTCCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR CAA 72 bp GATTCCACAGAGCCCCGGTGCCGCCGTCGGGGGCAATaGTCCCACTGTTGCCAGTGGAGGATGCACTTGGAG +
Preference number: 4 (lower is better)
Translates to: DSTEPRCRRRGQ*SHCCQWRMHLE
Trigger: CTCCAAGTGCATCCTCCACTGGCAACAGTGGGACAATTGCCCCCGACGGCGGCACCGGGGCTCTGTGGAATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR TCA 90 bp ATTCAGGGCAGGGTGACTGGCCTCAGGCAAGAGCCAAGATGCCACCTGCTCGTGCGGCCGGCAAGGCGCTaGGCCCACACTTGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: IQGRVTGLRQEPRCHLLVRPARR*AHTCRG
Trigger: ACCTCTACAAGTGTGGGCTCAGCGCCTTGCCGGCCG...CACGAGCAGGTGGCATCTTGGCTCTTGCCTGAGGCCAGTCACCCTGCCCTGAAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR TCA 90 bp GTCGGGGGCAATTGTCCCACTGTTGCCAGTGGAGGATGCACTTGGAGTGCCTTTGGTGGGGCCGTGGGGTaGGTGGTGTTCCTTGCGGGC +
Preference number: 4 (lower is better)
Translates to: VGGNCPTVASGGCTWSAFGGAVG*VVFLAG
Trigger: GCCCGCAAGGAACACCACTCACCCCACGGCCCCACC...AAAGGCACTCCAAGTGCATCCTCCACTGGCAACAGTGGGACAATTGCCCCCGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp CTGGGACAGCCGGCTGAGAAGCGCCACCCCCTCCCGCCTAGGGCTGTACACTTTATGGCTGCAAAGTTGTaGGCCTGGCAGCTGACCGTC +
Preference number: 4 (lower is better)
Translates to: LGQPAEKRHPLPPRAVHFMAAKL*AWQLTV
Trigger: GACGGTCAGCTGCCAGGCGCACAACTTTGCAGCCAT...AAAGTGTACAGCCCTAGGCGGGAGGGGGTGGCGCTTCTCAGCCGGCTGTCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp GGGTCCAGACGTCCAGACAGCAGCCGAAGGCTCTACCAGCCTTTTCCTGAAACCCTGGAAGGTCTCGGGTaGCAGCGTCCGCAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: GSRRPDSSRRLYQPFPETLEGLG*QRPQLP
Trigger: CGGCAGCTGCGGACGCTGGCACCCGAGACCTTCCAG...GGTTTCAGGAAAAGGCTGGTAGAGCCTTCGGCTGCTGTCTGGACGTCTGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp GGATGCTGCCTGGCCTGCTGGTTTCCAGATCCCAAAGCCCCTTCCTTCCCCTTCTTCAGGTCCTGGCCGTaGCGCAGCCCAGGGGACACA +
Preference number: 4 (lower is better)
Translates to: GCCLACWFPDPKAPSFPFFRSWP*RSPGDT
Trigger: TGTGTCCCCTGGGCTGCGGCACGGCCAGGACCTGAA...GAAGGGGAAGGAAGGGGCTTTGGGATCTGGAAACCAGCAGGCCAGGCAGCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp CAGACCTCTCGGAACGATCGGGATTCCACAGAGCCCCGGTGCCGCCGTCGGGGGCCAGATTCAAATCCCTaGGCGCCAGCTGCAGCTAAT +
Preference number: 4 (lower is better)
Translates to: QTSRNDRDSTEPRCRRRGPDSNP*APAAAN
Trigger: ATTAGCTGCAGCTGGCGCCCAGGGATTTGAATCTGG...CCCCCGACGGCGGCACCGGGGCTCTGTGGAATCCCGATCGTTCCGAGAGGTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp ATTCAGGGCAGGGTGACTGGCCTCAGGCAAGAGCCAAGATGCCACCTGCTCGTGCTTTGCGAAGCATGTTaGCCACGGGGCCGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: IQGRVTGLRQEPRCHLLVLCEAC*PRGRRS
Trigger: GGAGCGGCGGCCCCGTGGCCAACATGCTTCGCAAAG...CACGAGCAGGTGGCATCTTGGCTCTTGCCTGAGGCCAGTCACCCTGCCCTGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp CCAGACGTCCAGACAGCAGCCGAAGGCTCTACCAGCCTTTTCCTGAAACCCAGCAGCAGCTTCAGGTCCTaGCCGTGCCGCAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PDVQTAAEGSTSLFLKPSSSFRS*PCRSPG
Trigger: CCCTGGGCTGCGGCACGGCCAGGACCTGAAGCTGCT...GCTGGGTTTCAGGAAAAGGCTGGTAGAGCCTTCGGCTGCTGTCTGGACGTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp CCAGAGTGGACACTGTCCGTGGGCGCTCTGCGGGGCTGGCTGGGACAGCCGGCTACACATCCTCTCTGGTaGGGGATTCAGGTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: PEWTLSVGALRGWLGQPATHPLW*GIQVCA
Trigger: TGCACAAACCTGAATCCCCCACCAGAGAGGATGTGT...AGCCGGCTGTCCCAGCCAGCCCCGCAGAGCGCCCACGGACAGTGTCCACTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp TGCCTGAGATGGTTCATGAAATGCCCTCATTGTTCCCCTTCTGCTAAGGCCCCCGCGGAGCCGGCGGCCTaGTTCTGCCACCCGGAGCAC +
Preference number: 4 (lower is better)
Translates to: CLRWFMKCPHCSPSAKAPAEPAA*FCHPEH
Trigger: GTGCTCCGGGTGGCAGAAGCAGGCCGCCGGCTCCGC...GGGGGCCTTAGCAGAAGGGGAACAATGAGGGCATTTCATGAACCATCTCAGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp CTCCTGCTGTCCCACACAGGGCCCTTGCTGGGTCACACACCAAACAGCCTCAAGAGGTACTGCAGGCTGTaGAGGCCGCCAAAGACGCCG +
Preference number: 4 (lower is better)
Translates to: LLLSHTGPLLGHTPNSLKRYCRL*RPPKTP
Trigger: CGGCGTCTTTGGCGGCCTGCACAGCCTGCAGTACCT...CTTGAGGCTGTTTGGTGTGTGACCCAGCAAGGGCCCTGTGTGGGACAGCAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp ATTCAGGGCAGGGTGACTGGCCTCAGGCAAGAGCCAAGATGCCACCTGCTCGTGGAGCCCCGGAACCTCTaGAGCCATTCCCACAGGGAG +
Preference number: 4 (lower is better)
Translates to: IQGRVTGLRQEPRCHLLVEPRNL*SHSHRE
Trigger: CTCCCTGTGGGAATGGCTGCAGAGGTTCCGGGGCTC...CACGAGCAGGTGGCATCTTGGCTCTTGCCTGAGGCCAGTCACCCTGCCCTGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp CAGGACGGCTGGGAGGGCCAGGTCTTCCGTGATGCAGAAGTGCCTGAGATGGTTGTGGACATGTGGCAGTaGTGGGTGCTGACGCCCTGG +
Preference number: 4 (lower is better)
Translates to: QDGWEGQVFRDAEVPEMVVDMWQ*WVLTPW
Trigger: CCAGGGCGTCAGCACCCAGCACTGCCACATGTCCAC...AACCATCTCAGGCACTTCTGCATCACGGAAGACCTGGCCCTCCCAGCCGTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp TTCTTGGACCCCAGCAGTTGGACCTGGGTCTGCCAGGGTTGCCTGAGACATCAGCTGAAGTGGCCGGGCTaGAGGAGGCCGATGCGGTTG +
Preference number: 4 (lower is better)
Translates to: FLDPSSWTWVCQGCLRHQLKWPG*RRPMRL
Trigger: CAACCGCATCGGCCTCCTCCAGCCCGGCCACTTCAG...CTGATGTCTCAGGCAACCCTGGCAGACCCAGGTCCAACTGCTGGGGTCCAAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp TGCTTTCTCCAGGAACCACGGGGCCCTCCAGACCTCTCGGAACGATCGGGATTCAGCCTGCGGAGGTCGTaGAACGCCTTGTGGTGGACC +
Preference number: 4 (lower is better)
Translates to: CFLQEPRGPPDLSERSGFSLRRS*NALWWT
Trigger: GGTCCACCACAAGGCGTTCCACGACCTCCGCAGGCT...GAATCCCGATCGTTCCGAGAGGTCTGGAGGGCCCCGTGGTTCCTGGAGAAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp AACCACGGGGCCCTCCAGACCTCTCGGAACGATCGGGATTCCACAGAGCCCCGGCTTGTGCTGGTAGTCTaGGGCATAGTCTGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: NHGALQTSRNDRDSTEPRLVLVV*GIVWQL
Trigger: GAGCTGCCAGACTATGCCCCAGACTACCAGCACAAG...CCGGGGCTCTGTGGAATCCCGATCGTTCCGAGAGGTCTGGAGGGCCCCGTGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp CTGTCCCACACAGGGCCCTTGCTGGGTCACACACCAAACAGCCTCAAGGAAAAACGCTGGGGGCACGGATaGGGGTCCTGCGGGCACACT +
Preference number: 4 (lower is better)
Translates to: LSHTGPLLGHTPNSLKEKRWGHG*GSCGHT
Trigger: AGTGTGCCCGCAGGACCCCCATCCGTGCCCCCAGCG...TTTTTCCTTGAGGCTGTTTGGTGTGTGACCCAGCAAGGGCCCTGTGTGGGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp CTCCTGCTGTCCCACACAGGGCCCTTGCTGGGTCACACACCAAACAGCCTCAAGGACATGTGGCAGTGCTaGGTGCTGACGCCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: LLLSHTGPLLGHTPNSLKDMWQC*VLTPWV
Trigger: GACCCAGGGCGTCAGCACCCAGCACTGCCACATGTC...CTTGAGGCTGTTTGGTGTGTGACCCAGCAAGGGCCCTGTGTGGGACAGCAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp CTGGGACAGCCGGCTGAGAAGCGCCACCCCCTCCCGCCTAGGGCTGTACACTTTACTGTGGATGCTGCCTaGCCTGCTGGTTTCCAGATC +
Preference number: 4 (lower is better)
Translates to: LGQPAEKRHPLPPRAVHFTVDAA*PAGFQI
Trigger: GATCTGGAAACCAGCAGGCCAGGCAGCATCCACAGT...AAAGTGTACAGCCCTAGGCGGGAGGGGGTGGCGCTTCTCAGCCGGCTGTCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp CCAGACGTCCAGACAGCAGCCGAAGGCTCTACCAGCCTTTTCCTGAAACCCAGCAGCCCGGAGTCTCCTTaGCCCGTCCAGGCCGTCACT +
Preference number: 4 (lower is better)
Translates to: PDVQTAAEGSTSLFLKPSSPESP*PVQAVT
Trigger: AGTGACGGCCTGGACGGGCCAAGGAGACTCCGGGCT...GCTGGGTTTCAGGAAAAGGCTGGTAGAGCCTTCGGCTGCTGTCTGGACGTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR CAA 72 bp CTTGGACCCCAGCAGTTGGACCTGGGTCTGCCAGGGTaGCCTGAGACATCAGGAATGAGAGGCGCTACCCCC +
Preference number: 4 (lower is better)
Translates to: LGPQQLDLGLPG*PETSGMRGATP
Trigger: GGGGGTAGCGCCTCTCATTCCTGATGTCTCAGGCAACCCTGGCAGACCCAGGTCCAACTGCTGGGGTCCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR TCA 90 bp CTCCTGCTGTCCCACACAGGGCCCTTGCTGGGTCACACACCAAACAGCCTCAAGGGTGGTGAGCGTGTGTaGCTTGATCTGGTGCGGGGA +
Preference number: 4 (lower is better)
Translates to: LLLSHTGPLLGHTPNSLKGGERV*LDLVRG
Trigger: TCCCCGCACCAGATCAAGTCACACACGCTCACCACC...CTTGAGGCTGTTTGGTGTGTGACCCAGCAAGGGCCCTGTGTGGGACAGCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp TGCCTGAGATGGTTCATGAAATGCCCTCATTGTTCCCCTTCTGCTAAGGCCCCCCCAGGCCCCGGAAGGTaGCCGGGCCCAGACTCCACA +
Preference number: 4 (lower is better)
Translates to: CLRWFMKCPHCSPSAKAPPGPGR*PGPDST
Trigger: TGTGGAGTCTGGGCCCGGGCACCTTCCGGGGCCTGG...GGGGGCCTTAGCAGAAGGGGAACAATGAGGGCATTTCATGAACCATCTCAGGCA
61% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp ATTCAGGGCAGGGTGACTGGCCTCAGGCAAGAGCCAAGATGCCACCTGCTCGTGGGTTCCTGGGGTTGGTaGAGTTCTTCCCCGGCTTCC +
Preference number: 4 (lower is better)
Translates to: IQGRVTGLRQEPRCHLLVGSWGW*SSSPAS
Trigger: GGAAGCCGGGGAAGAACTGCACCAACCCCAGGAACC...CACGAGCAGGTGGCATCTTGGCTCTTGCCTGAGGCCAGTCACCCTGCCCTGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp CACCCAGCCTCGTGGGTGAGCCTCATTTGTTCTTCTCTGCGTCCTGCTTTCTCCCCACCTGCTCGTGTGTaGCCAGACTGCTGGCCACCC +
Preference number: 4 (lower is better)
Translates to: HPASWVSLICSSLRPAFSPPARV*PDCWPP
Trigger: GGGTGGCCAGCAGTCTGGGCACACACGAGCAGGTGG...GGAGAAAGCAGGACGCAGAGAAGAACAAATGAGGCTCACCCACGAGGCTGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp GAGCATCCCCAGGACGGCTGGGAGGGCCAGGTCTTCCGTGATGCAGAAGTGCCTAGTTGGACCTGGGTCTaGCAGGGTTGCCTGAGACAT +
Preference number: 4 (lower is better)
Translates to: EHPQDGWEGQVFRDAEVPSWTWV*QGCLRH
Trigger: ATGTCTCAGGCAACCCTGGCAGACCCAGGTCCAACT...AGGCACTTCTGCATCACGGAAGACCTGGCCCTCCCAGCCGTCCTGGGGATGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp TGCCGCCGTCGGGGGCAATTGTCCCACTGTTGCCAGTGGAGGATGCACTTGGAGCCCACACAGGGCCCTTaGTGGGTCACACACCAAACA +
Preference number: 4 (lower is better)
Translates to: CRRRGQLSHCCQWRMHLEPTQGP*WVTHQT
Trigger: TGTTTGGTGTGTGACCCAGCAAGGGCCCTGTGTGGG...CTCCAAGTGCATCCTCCACTGGCAACAGTGGGACAATTGCCCCCGACGGCGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp GGGTCCAGACGTCCAGACAGCAGCCGAAGGCTCTACCAGCCTTTTCCTGAAACCCCCACCTTGCCAGAGTaGACACTGTCCGTGGGCGCT +
Preference number: 4 (lower is better)
Translates to: GSRRPDSSRRLYQPFPETPTLPE*TLSVGA
Trigger: AGCGCCCACGGACAGTGTCCACTCTGGCAAGGTGGG...GGTTTCAGGAAAAGGCTGGTAGAGCCTTCGGCTGCTGTCTGGACGTCTGGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp CTGGGACAGCCGGCTGAGAAGCGCCACCCCCTCCCGCCTAGGGCTGTACACTTTCAAGGCCAGGTCCCTTaGAGACTATCGTTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: LGQPAEKRHPLPPRAVHFQGQVP*RLSLPV
Trigger: AACTGGCAACGATAGTCTCCAAGGGACCTGGCCTTG...AAAGTGTACAGCCCTAGGCGGGAGGGGGTGGCGCTTCTCAGCCGGCTGTCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp CACCCAGCCTCGTGGGTGAGCCTCATTTGTTCTTCTCTGCGTCCTGCTTTCTCCCATCCCCAGGACGGCTaGGAGGGCCAGGTCTTCCGT +
Preference number: 4 (lower is better)
Translates to: HPASWVSLICSSLRPAFSHPQDG*EGQVFR
Trigger: ACGGAAGACCTGGCCCTCCCAGCCGTCCTGGGGATG...GGAGAAAGCAGGACGCAGAGAAGAACAAATGAGGCTCACCCACGAGGCTGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR TCA 90 bp GGGTCCAGACGTCCAGACAGCAGCCGAAGGCTCTACCAGCCTTTTCCTGAAACCCCCCGAGGGAGGGGCTaGAGGTGGAGTAGGATAGAA +
Preference number: 4 (lower is better)
Translates to: GSRRPDSSRRLYQPFPETPRGRG*RWSRIE
Trigger: TTCTATCCTACTCCACCTTCAGCCCCTCCCTCGGGG...GGTTTCAGGAAAAGGCTGGTAGAGCCTTCGGCTGCTGTCTGGACGTCTGGACCC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR TCA 90 bp GTTCTTGGACCCCAGCAGTTGGACCTGGGTCTGCCAGGGTTGCCTGAGACATCAGAAAAATTCAGCAGCTaGGCCGTGCGGGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: VLGPQQLDLGLPGLPETSEKFSS*AVREAW
Trigger: CCAGGCCTCCCGCACGGCTCAGCTGCTGAATTTTTC...TGATGTCTCAGGCAACCCTGGCAGACCCAGGTCCAACTGCTGGGGTCCAAGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp TGCTTTCTCCAGGAACCACGGGGCCCTCCAGACCTCTCGGAACGATCGGGATTCCCACACAGCACCCTTTaGGAAGCATGTTGGCCACGG +
Preference number: 4 (lower is better)
Translates to: CFLQEPRGPPDLSERSGFPHSTL*EACWPR
Trigger: CCGTGGCCAACATGCTTCGCAAAGGGTGCTGTGTGG...GAATCCCGATCGTTCCGAGAGGTCTGGAGGGCCCCGTGGTTCCTGGAGAAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp CGCTCACCCTCGGGGCCTGGCTCCCTCATATACAATAAGCTGCTTCTCACTTCTTCCTGCGGGCACACTTaGCCTTCCTCTTGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: RSPSGPGSLIYNKLLLTSSCGHT*PSSWAG
Trigger: CCCGGCCCAAGAGGAAGGGCAAGTGTGCCCGCAGGA...AGAAGTGAGAAGCAGCTTATTGTATATGAGGGAGCCAGGCCCCGAGGGTGAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp CTTGGACCCCAGCAGTTGGACCTGGGTCTGCCAGGGTTGCCTGAGACATCAGGAAGCCAAGATGCCACCTaGTCGTGTGTGCCCAGACTG +
Preference number: 4 (lower is better)
Translates to: LGPQQLDLGLPGLPETSGSQDAT*SCVPRL
Trigger: CAGTCTGGGCACACACGAGCAGGTGGCATCTTGGCT...TCCTGATGTCTCAGGCAACCCTGGCAGACCCAGGTCCAACTGCTGGGGTCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp GGGTCCAGACGTCCAGACAGCAGCCGAAGGCTCTACCAGCCTTTTCCTGAAACCGTCTGGGGCATAGTCTaGCAGCTCGGGGGCCTGTTT +
Preference number: 4 (lower is better)
Translates to: GSRRPDSSRRLYQPFPETVWGIV*QLGGLF
Trigger: AAACAGGCCCCCGAGCTGCCAGACTATGCCCCAGAC...GGTTTCAGGAAAAGGCTGGTAGAGCCTTCGGCTGCTGTCTGGACGTCTGGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp CAGGACGGCTGGGAGGGCCAGGTCTTCCGTGATGCAGAAGTGCCTGAGATGGTTTCCTTGGTGGACATGTaGCAGTGCTGGGTGCTGACG +
Preference number: 4 (lower is better)
Translates to: QDGWEGQVFRDAEVPEMVSLVDM*QCWVLT
Trigger: CGTCAGCACCCAGCACTGCCACATGTCCACCAAGGA...AACCATCTCAGGCACTTCTGCATCACGGAAGACCTGGCCCTCCCAGCCGTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp CCAGACGTCCAGACAGCAGCCGAAGGCTCTACCAGCCTTTTCCTGAAACCCAGCTCAGGGCAGGGTGACTaGCCTCAGGCAAGAGCCAAG +
Preference number: 4 (lower is better)
Translates to: PDVQTAAEGSTSLFLKPSSGQGD*PQARAK
Trigger: CTTGGCTCTTGCCTGAGGCCAGTCACCCTGCCCTGA...GCTGGGTTTCAGGAAAAGGCTGGTAGAGCCTTCGGCTGCTGTCTGGACGTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR TCA 90 bp TCCTCTCTGGTGGGGGATTCAGGTTTGTGCAAAGCACAAAGGAGCTTGTACCCAGTCCTCAGCGGAGAGTaGCCGCCAGCCCCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: SSLVGDSGLCKAQRSLYPVLSGE*PPAPVS
Trigger: GGACACTGGGGCTGGCGGTCACTCTCCGCTGAGGAC...TGGGTACAAGCTCCTTTGTGCTTTGCACAAACCTGAATCCCCCACCAGAGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR TCA 90 bp TGCCGCCGTCGGGGGCAATTGTCCCACTGTTGCCAGTGGAGGATGCACTTGGAGAAACTGCACCTTCTGTaGGAACCTCATTGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: CRRRGQLSHCCQWRMHLEKLHLL*EPHCPG
Trigger: TCCCGGGCAATGAGGTTCTCACAGAAGGTGCAGTTT...CTCCAAGTGCATCCTCCACTGGCAACAGTGGGACAATTGCCCCCGACGGCGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp CCCAGCCTCGTGGGTGAGCCTCATTTGTTCTTCTCTGCGTCCTGCTTTCTCCAGTCCAGCTCCTCCAGGTaGACGAAGCCCTCGAAGGTG +
Preference number: 4 (lower is better)
Translates to: PSLVGEPHLFFSASCFLQSSSSR*TKPSKV
Trigger: CACCTTCGAGGGCTTCGTGCACCTGGAGGAGCTGGA...CTGGAGAAAGCAGGACGCAGAGAAGAACAAATGAGGCTCACCCACGAGGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp TGCTTTCTCCAGGAACCACGGGGCCCTCCAGACCTCTCGGAACGATCGGGATTCGGATGCTGCCTGGCCTaGTGGTTTCCAGATCCCAAA +
Preference number: 4 (lower is better)
Translates to: CFLQEPRGPPDLSERSGFGCCLA*WFPDPK
Trigger: TTTGGGATCTGGAAACCAGCAGGCCAGGCAGCATCC...GAATCCCGATCGTTCCGAGAGGTCTGGAGGGCCCCGTGGTTCCTGGAGAAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp GTTCTTGGACCCCAGCAGTTGGACCTGGGTCTGCCAGGGTTGCCTGAGACATCATGGAACGCCTTGTGGTaGACCCACTGCAGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: VLGPQQLDLGLPGLPETSWNALW*THCSWF
Trigger: GAACCAGCTGCAGTGGGTCCACCACAAGGCGTTCCA...TGATGTCTCAGGCAACCCTGGCAGACCCAGGTCCAACTGCTGGGGTCCAAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp GTTCTTGGACCCCAGCAGTTGGACCTGGGTCTGCCAGGGTTGCCTGAGACATCATGCTGCCTGGCCTGCTaGTTTCCAGATCCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: VLGPQQLDLGLPGLPETSCCLAC*FPDPKA
Trigger: GGCTTTGGGATCTGGAAACCAGCAGGCCAGGCAGCA...TGATGTCTCAGGCAACCCTGGCAGACCCAGGTCCAACTGCTGGGGTCCAAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp GAGCATCCCCAGGACGGCTGGGAGGGCCAGGTCTTCCGTGATGCAGAAGTGCCTCACACACATCCTCTCTaGTGGGGGATTCAGGTTTGT +
Preference number: 4 (lower is better)
Translates to: EHPQDGWEGQVFRDAEVPHTHPL*WGIQVC
Trigger: ACAAACCTGAATCCCCCACCAGAGAGGATGTGTGTG...AGGCACTTCTGCATCACGGAAGACCTGGCCCTCCCAGCCGTCCTGGGGATGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR TCA 90 bp CCCAGCCTCGTGGGTGAGCCTCATTTGTTCTTCTCTGCGTCCTGCTTTCTCCAGCCCGCCTTAGAGATCTaGTTGCGGTTCCTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: PSLVGEPHLFFSASCFLQPALEI*LRFLGL
Trigger: CAACCCCAGGAACCGCAATCAGATCTCTAAGGCGGG...CTGGAGAAAGCAGGACGCAGAGAAGAACAAATGAGGCTCACCCACGAGGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp TATACAATAAGCTGCTTCTCACTTCTCACCCTGAAGCCAACAGCTACGACAGCACTGGCCGAGGAGGCCTaGTGCACCCCGCTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: YTISCFSLLTLKPTATTALAEEA*CTPLGA
Trigger: TGCCCCCAGCGGGGTGCAGCAGGCCTCCTCGGCCAG...TGCTGTCGTAGCTGTTGGCTTCAGGGTGAGAAGTGAGAAGCAGCTTATTGTATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp CTCCTGCTGTCCCACACAGGGCCCTTGCTGGGTCACACACCAAACAGCCTCAAGGTTGCCAGTGGAGGATaGACTTGGAGTGCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: LLLSHTGPLLGHTPNSLKVASGG*TWSAFS
Trigger: GGAAAAGGCACTCCAAGTGCATCCTCCACTGGCAAC...CTTGAGGCTGTTTGGTGTGTGACCCAGCAAGGGCCCTGTGTGGGACAGCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp CACCCAGCCTCGTGGGTGAGCCTCATTTGTTCTTCTCTGCGTCCTGCTTTCTCCAGGCAAGAGCCAAGATaGCACCTGCTCGTGTGTGCC +
Preference number: 4 (lower is better)
Translates to: HPASWVSLICSSLRPAFSRQEPR*HLLVCA
Trigger: GGCACACACGAGCAGGTGGCATCTTGGCTCTTGCCT...GGAGAAAGCAGGACGCAGAGAAGAACAAATGAGGCTCACCCACGAGGCTGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp GTTCTTGGACCCCAGCAGTTGGACCTGGGTCTGCCAGGGTTGCCTGAGACATCACAAAGTGACTCTTGCTaGCTCCCCCTTCCTCACCGT +
Preference number: 4 (lower is better)
Translates to: VLGPQQLDLGLPGLPETSQSDSC*LPLPHR
Trigger: ACGGTGAGGAAGGGGGAGGCAGCAAGAGTCACTTTG...TGATGTCTCAGGCAACCCTGGCAGACCCAGGTCCAACTGCTGGGGTCCAAGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp GACGTACAGTTAGGTAACGGAGTGGGAGGGGGACTGTGCATTTGTGTATATATAGCCCGCAAGCAACCGTaGTGCTGCCCGGCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: DVQLGNGVGGGLCICVYIARKQP*CCPAAP
Trigger: CGGGGCTGCCGGGCAGCACCACGGTTGCTTGCGGGC...TATATATACACAAATGCACAGTCCCCCTCCCACTCCGTTACCTAACTGTACGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp CTTGGACCCCAGCAGTTGGACCTGGGTCTGCCAGGGTTGCCTGAGACATCAGGATGGACCCACTGCAGCTaGTTCTCGTGCAGCAAAAGA +
Preference number: 4 (lower is better)
Translates to: LGPQQLDLGLPGLPETSGWTHCS*FSCSKR
Trigger: TCTTTTGCTGCACGAGAACCAGCTGCAGTGGGTCCA...TCCTGATGTCTCAGGCAACCCTGGCAGACCCAGGTCCAACTGCTGGGGTCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp CACTGTTGCCAGTGGAGGATGCACTTGGAGTGCCTTTTCCCACCTTGCCAGAGTTGCGGTTCCTGGGGTTaGTGCAGTTCTTCCCCGGCT +
Preference number: 4 (lower is better)
Translates to: HCCQWRMHLECLFPPCQSCGSWG*CSSSPA
Trigger: AGCCGGGGAAGAACTGCACCAACCCCAGGAACCGCA...ACTCTGGCAAGGTGGGAAAAGGCACTCCAAGTGCATCCTCCACTGGCAACAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp CTCCTGCTGTCCCACACAGGGCCCTTGCTGGGTCACACACCAAACAGCCTCAAGTCTGATTGCGGTTCCTaGGGTTGGTGCAGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: LLLSHTGPLLGHTPNSLKSDCGS*GWCSSS
Trigger: GGAAGAACTGCACCAACCCCAGGAACCGCAATCAGA...CTTGAGGCTGTTTGGTGTGTGACCCAGCAAGGGCCCTGTGTGGGACAGCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp TGCTTTCTCCAGGAACCACGGGGCCCTCCAGACCTCTCGGAACGATCGGGATTCCACGGTCCGACCCTTTaGACTAACACTGTGGATGCT +
Preference number: 4 (lower is better)
Translates to: CFLQEPRGPPDLSERSGFHGPTL*TNTVDA
Trigger: AGCATCCACAGTGTTAGTCCAAAGGGTCGGACCGTG...GAATCCCGATCGTTCCGAGAGGTCTGGAGGGCCCCGTGGTTCCTGGAGAAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR TCA 90 bp CACCCAGCCTCGTGGGTGAGCCTCATTTGTTCTTCTCTGCGTCCTGCTTTCTCCTCTGCCAGGGTTGCCTaGGACATCAGGAATGAGAGG +
Preference number: 4 (lower is better)
Translates to: HPASWVSLICSSLRPAFSSARVA*DIRNER
Trigger: CCTCTCATTCCTGATGTCTCAGGCAACCCTGGCAGA...GGAGAAAGCAGGACGCAGAGAAGAACAAATGAGGCTCACCCACGAGGCTGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp GACGTACAGTTAGGTAACGGAGTGGGAGGGGGACTGTGCATTTGTGTATATATAAAGCAACCGTGGTGCTaGCCGGCAGCCCCGCGCGCT +
Preference number: 4 (lower is better)
Translates to: DVQLGNGVGGGLCICVYIKQPWC*PAAPRA
Trigger: AGCGCGCGGGGCTGCCGGGCAGCACCACGGTTGCTT...TATATATACACAAATGCACAGTCCCCCTCCCACTCCGTTACCTAACTGTACGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp CGCTCACCCTCGGGGCCTGGCTCCCTCATATACAATAAGCTGCTTCTCACTTCTTTGTGGTGGACCCACTaGAGCTGGTTCTCGTGCAGC +
Preference number: 4 (lower is better)
Translates to: RSPSGPGSLIYNKLLLTSLWWTH*SWFSCS
Trigger: GCTGCACGAGAACCAGCTGCAGTGGGTCCACCACAA...AGAAGTGAGAAGCAGCTTATTGTATATGAGGGAGCCAGGCCCCGAGGGTGAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp CTTGGACCCCAGCAGTTGGACCTGGGTCTGCCAGGGTTGCCTGAGACATCAGGACAATTGTCCCACTGTTaGCAGTGGAGGATGCACTTG +
Preference number: 4 (lower is better)
Translates to: LGPQQLDLGLPGLPETSGQLSHC*QWRMHL
Trigger: CAAGTGCATCCTCCACTGGCAACAGTGGGACAATTG...TCCTGATGTCTCAGGCAACCCTGGCAGACCCAGGTCCAACTGCTGGGGTCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp CACTGTTGCCAGTGGAGGATGCACTTGGAGTGCCTTTTCCCACCTTGCCAGAGTCCGTGGAGAAACAGGTaGCTGAGGTTGACCAGGTCC +
Preference number: 4 (lower is better)
Translates to: HCCQWRMHLECLFPPCQSPWRNR*LRLTRS
Trigger: GGACCTGGTCAACCTCAGCCACCTGTTTCTCCACGG...ACTCTGGCAAGGTGGGAAAAGGCACTCCAAGTGCATCCTCCACTGGCAACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR TCA 90 bp GGGTCCAGACGTCCAGACAGCAGCCGAAGGCTCTACCAGCCTTTTCCTGAAACCCCTCATTGCCCGGGATaGAGTTCTAGATTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: GSRRPDSSRRLYQPFPETPHCPG*SSRFQP
Trigger: AGGCTGAAATCTAGAACTTCATCCCGGGCAATGAGG...GGTTTCAGGAAAAGGCTGGTAGAGCCTTCGGCTGCTGTCTGGACGTCTGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR TCA 90 bp TATACAATAAGCTGCTTCTCACTTCTCACCCTGAAGCCAACAGCTACGACAGCACCTCTGCCTGCACCCTaGGCATCCCCAGGACGGCTG +
Preference number: 4 (lower is better)
Translates to: YTISCFSLLTLKPTATTAPLPAP*ASPGRL
Trigger: CAGCCGTCCTGGGGATGCTCAGGGTGCAGGCAGAGG...TGCTGTCGTAGCTGTTGGCTTCAGGGTGAGAAGTGAGAAGCAGCTTATTGTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp TCCTCTCTGGTGGGGGATTCAGGTTTGTGCAAAGCACAAAGGAGCTTGTACCCACCGATGCGGTTGTTCTaGAGGAAGACGCGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: SSLVGDSGLCKAQRSLYPPMRLF*RKTRSL
Trigger: CAGCGAGCGCGTCTTCCTGCAGAACAACCGCATCGG...TGGGTACAAGCTCCTTTGTGCTTTGCACAAACCTGAATCCCCCACCAGAGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp ATTTCAGCCTCTGATGATCTTTCCTTTGGTAATTGGTTCTTGGACCCCAGCAGTGCCAGCGTCCGCAGCTaGCGGTTGTCGCCGAGGTCC +
Preference number: 4 (lower is better)
Translates to: ISASDDLSFGNWFLDPSSASVRS*RLSPRS
Trigger: GGACCTCGGCGACAACCGGCAGCTGCGGACGCTGGC...ACTGCTGGGGTCCAAGAACCAATTACCAAAGGAAAGATCATCAGAGGCTGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp CGCTCACCCTCGGGGCCTGGCTCCCTCATATACAATAAGCTGCTTCTCACTTCTGACTCCACAGCTTGTTaGCGTGGAGAAACAGGTGGC +
Preference number: 4 (lower is better)
Translates to: RSPSGPGSLIYNKLLLTSDSTAC*RGETGG
Trigger: GCCACCTGTTTCTCCACGGCAACAAGCTGTGGAGTC...AGAAGTGAGAAGCAGCTTATTGTATATGAGGGAGCCAGGCCCCGAGGGTGAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp GACGTACAGTTAGGTAACGGAGTGGGAGGGGGACTGTGCATTTGTGTATATATATCCACAGAGCCCCGGTaGCGCCGTCGGGGGCAATTG +
Preference number: 4 (lower is better)
Translates to: DVQLGNGVGGGLCICVYISTEPR*RRRGQL
Trigger: CAATTGCCCCCGACGGCGGCACCGGGGCTCTGTGGA...TATATATACACAAATGCACAGTCCCCCTCCCACTCCGTTACCTAACTGTACGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp GTCTTCCGTGATGCAGAAGTGCCTGAGATGGTTCATGAAATGCCCTCATTGTTCTCAGCAGCTGAGCCGTaGGGGAGGCCTGGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: VFRDAEVPEMVHEMPSLFSAAEP*GRPGLK
Trigger: CTTGAGCCCAGGCCTCCCGCACGGCTCAGCTGCTGA...GAACAATGAGGGCATTTCATGAACCATCTCAGGCACTTCTGCATCACGGAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp AACTGCACCTTCTGTGAGAACCTCATTGCCCGGGATGAAGTTCTAGATTTCAGCCTGGTGCGGGGACGCTaGTCCCGTGCAGTTCCGGAA +
Preference number: 4 (lower is better)
Translates to: NCTFCENLIARDEVLDFSLVRGR*SRAVPE
Trigger: TTCCGGAACTGCACGGGACCAGCGTCCCCGCACCAG...GCTGAAATCTAGAACTTCATCCCGGGCAATGAGGTTCTCACAGAAGGTGCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp CTCATATACAATAAGCTGCTTCTCACTTCTCACCCTGAAGCCAACAGCTACGACAGGCCCCCAGGGAACTaGCCGAGGAGGCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: LIYNKLLLTSHPEANSYDRPPGN*PRRPAA
Trigger: TGCAGCAGGCCTCCTCGGCCAGTTCCCTGGGGGCCT...GTCGTAGCTGTTGGCTTCAGGGTGAGAAGTGAGAAGCAGCTTATTGTATATGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp GTCTTCCGTGATGCAGAAGTGCCTGAGATGGTTCATGAAATGCCCTCATTGTTCGTGTGCCCAGACTGCTaGCCACCCAGCCTCGTGGGT +
Preference number: 4 (lower is better)
Translates to: VFRDAEVPEMVHEMPSLFVCPDC*PPSLVG
Trigger: ACCCACGAGGCTGGGTGGCCAGCAGTCTGGGCACAC...GAACAATGAGGGCATTTCATGAACCATCTCAGGCACTTCTGCATCACGGAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp CACCCAGCCTCGTGGGTGAGCCTCATTTGTTCTTCTCTGCGTCCTGCTTTCTCCTTTGGACTAACACTGTaGATGCTGCCTGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: HPASWVSLICSSLRPAFSFGLTL*MLPGLL
Trigger: CAGCAGGCCAGGCAGCATCCACAGTGTTAGTCCAAA...GGAGAAAGCAGGACGCAGAGAAGAACAAATGAGGCTCACCCACGAGGCTGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR TCA 90 bp AACTGCACCTTCTGTGAGAACCTCATTGCCCGGGATGAAGTTCTAGATTTCAGCCGTCCAGGCCGTCACTaGCCAAACGCTAGGCTGACG +
Preference number: 4 (lower is better)
Translates to: NCTFCENLIARDEVLDFSRPGRH*PNARLT
Trigger: CGTCAGCCTAGCGTTTGGTCAGTGACGGCCTGGACG...GCTGAAATCTAGAACTTCATCCCGGGCAATGAGGTTCTCACAGAAGGTGCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp AAAGAAGAAAATAAATTCTGTTCCTTGGTGGACATGTGGCAGTGCTGGGTGCTGCCGGCGGCCTGCTTCTaGCACCCGGAGCACTTCGCA +
Preference number: 4 (lower is better)
Translates to: KEENKFCSLVDMWQCWVLPAACF*HPEHFA
Trigger: TGCGAAGTGCTCCGGGTGGCAGAAGCAGGCCGCCGG...CAGCACCCAGCACTGCCACATGTCCACCAAGGAACAGAATTTATTTTCTTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp TGCCGCCGTCGGGGGCAATTGTCCCACTGTTGCCAGTGGAGGATGCACTTGGAGAGATGGTTCATGAAATaGCCTCATTGTTCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: CRRRGQLSHCCQWRMHLERWFMK*PHCSPS
Trigger: AGAAGGGGAACAATGAGGGCATTTCATGAACCATCT...CTCCAAGTGCATCCTCCACTGGCAACAGTGGGACAATTGCCCCCGACGGCGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp CACCCAGCCTCGTGGGTGAGCCTCATTTGTTCTTCTCTGCGTCCTGCTTTCTCCACGAAGATGTCGTCCTaGAGGTACTCGATGTGGTTG +
Preference number: 4 (lower is better)
Translates to: HPASWVSLICSSLRPAFSTKMSS*RYSMWL
Trigger: CAACCACATCGAGTACCTCCAGGACGACATCTTCGT...GGAGAAAGCAGGACGCAGAGAAGAACAAATGAGGCTCACCCACGAGGCTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp GTCGGGGGCAATTGTCCCACTGTTGCCAGTGGAGGATGCACTTGGAGTGCCTTTAATTCTGTTCCTTGGTaGACATGTGGCAGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: VGGNCPTVASGGCTWSAFNSVPW*TCGSAG
Trigger: CCCAGCACTGCCACATGTCCACCAAGGAACAGAATT...AAAGGCACTCCAAGTGCATCCTCCACTGGCAACAGTGGGACAATTGCCCCCGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp ATTTCAGCCTCTGATGATCTTTCCTTTGGTAATTGGTTCTTGGACCCCAGCAGTAGTGGACACTGTCCGTaGGCGCTCTGCGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: ISASDDLSFGNWFLDPSSSGHCP*ALCGAG
Trigger: GCCAGCCCCGCAGAGCGCCCACGGACAGTGTCCACT...ACTGCTGGGGTCCAAGAACCAATTACCAAAGGAAAGATCATCAGAGGCTGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp AACCACGGGGCCCTCCAGACCTCTCGGAACGATCGGGATTCCACAGAGCCCCGGTTTTTCTCTCTTAATTaGATTCAGCGTTTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: NHGALQTSRNDRDSTEPRFFSLN*IQRFWL
Trigger: GAGCCAGAAACGCTGAATCCAATTAAGAGAGAAAAA...CCGGGGCTCTGTGGAATCCCGATCGTTCCGAGAGGTCTGGAGGGCCCCGTGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp AAAGAAGAAAATAAATTCTGTTCCTTGGTGGACATGTGGCAGTGCTGGGTGCTGCACGGATGGGGGTCCTaGGGGCACACTTGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: KEENKFCSLVDMWQCWVLHGWGS*GHTCPS
Trigger: GGAAGGGCAAGTGTGCCCGCAGGACCCCCATCCGTG...CAGCACCCAGCACTGCCACATGTCCACCAAGGAACAGAATTTATTTTCTTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp TATACAATAAGCTGCTTCTCACTTCTCACCCTGAAGCCAACAGCTACGACAGCACCCAGCAGTTGGACCTaGGTCTGCCAGGGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: YTISCFSLLTLKPTATTAPSSWT*VCQGCL
Trigger: CAGGCAACCCTGGCAGACCCAGGTCCAACTGCTGGG...TGCTGTCGTAGCTGTTGGCTTCAGGGTGAGAAGTGAGAAGCAGCTTATTGTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp AACTGCACCTTCTGTGAGAACCTCATTGCCCGGGATGAAGTTCTAGATTTCAGCTTGGACCCCAGCAGTTaGACCTGGGTCTGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: NCTFCENLIARDEVLDFSLDPSS*TWVCQG
Trigger: ACCCTGGCAGACCCAGGTCCAACTGCTGGGGTCCAA...GCTGAAATCTAGAACTTCATCCCGGGCAATGAGGTTCTCACAGAAGGTGCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp CCAGACGTCCAGACAGCAGCCGAAGGCTCTACCAGCCTTTTCCTGAAACCCAGCCTTTCCTTTGGTAATTaGTTCTTGGACCCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: PDVQTAAEGSTSLFLKPSLSFGN*FLDPSS
Trigger: ACTGCTGGGGTCCAAGAACCAATTACCAAAGGAAAG...GCTGGGTTTCAGGAAAAGGCTGGTAGAGCCTTCGGCTGCTGTCTGGACGTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp GAGCATCCCCAGGACGGCTGGGAGGGCCAGGTCTTCCGTGATGCAGAAGTGCCTCTATCGTTGCCAGTTTaGGATTCTAGACAAAAATTC +
Preference number: 4 (lower is better)
Translates to: EHPQDGWEGQVFRDAEVPLSLPV*DSRQKF
Trigger: GAATTTTTGTCTAGAATCCCAAACTGGCAACGATAG...AGGCACTTCTGCATCACGGAAGACCTGGCCCTCCCAGCCGTCCTGGGGATGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR TCA 90 bp GACGTACAGTTAGGTAACGGAGTGGGAGGGGGACTGTGCATTTGTGTATATATACTGAGACATCAGGAATaGGAGGCGCTACCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: DVQLGNGVGGGLCICVYILRHQE*EALPPR
Trigger: CCTCGGGGGTAGCGCCTCTCATTCCTGATGTCTCAG...TATATATACACAAATGCACAGTCCCCCTCCCACTCCGTTACCTAACTGTACGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR TCA 90 bp TATACAATAAGCTGCTTCTCACTTCTCACCCTGAAGCCAACAGCTACGACAGCAGACCAAACGCTAGGCTaGCGACACGGTCCGACCCTT +
Preference number: 4 (lower is better)
Translates to: YTISCFSLLTLKPTATTADQTLG*RHGPTL
Trigger: AAGGGTCGGACCGTGTCGTCAGCCTAGCGTTTGGTC...TGCTGTCGTAGCTGTTGGCTTCAGGGTGAGAAGTGAGAAGCAGCTTATTGTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp ATTTCAGCCTCTGATGATCTTTCCTTTGGTAATTGGTTCTTGGACCCCAGCAGTGCCCTCCGGGATGGCTaGAAAGTTGTGCGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: ISASDDLSFGNWFLDPSSALRDG*KVVRLA
Trigger: TGCCAGGCGCACAACTTTGCAGCCATCCCGGAGGGC...ACTGCTGGGGTCCAAGAACCAATTACCAAAGGAAAGATCATCAGAGGCTGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp CTCATATACAATAAGCTGCTTCTCACTTCTCACCCTGAAGCCAACAGCTACGACTGTGACTTGATCTGGTaGGGGGACGCTGGTCCCGTG +
Preference number: 4 (lower is better)
Translates to: LIYNKLLLTSHPEANSYDCDLIW*GDAGPV
Trigger: CACGGGACCAGCGTCCCCGCACCAGATCAAGTCACA...GTCGTAGCTGTTGGCTTCAGGGTGAGAAGTGAGAAGCAGCTTATTGTATATGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp GTCTTCCGTGATGCAGAAGTGCCTGAGATGGTTCATGAAATGCCCTCATTGTTCCCCCAAAGTGACTCTTaGTGCCTCCCCCTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: VFRDAEVPEMVHEMPSLFPQSDS*CLPLPH
Trigger: GTGAGGAAGGGGGAGGCAGCAAGAGTCACTTTGGGG...GAACAATGAGGGCATTTCATGAACCATCTCAGGCACTTCTGCATCACGGAAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp CGCTCACCCTCGGGGCCTGGCTCCCTCATATACAATAAGCTGCTTCTCACTTCTGGGGATTCAGGTTTGTaGAAAGCACAAAGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: RSPSGPGSLIYNKLLLTSGDSGL*KAQRSL
Trigger: CAAGCTCCTTTGTGCTTTGCACAAACCTGAATCCCC...AGAAGTGAGAAGCAGCTTATTGTATATGAGGGAGCCAGGCCCCGAGGGTGAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp TCATATACAATAAGCTGCTTCTCACTTCTCACCCTGAAGCCAACAGCTACGACAAGCTTCACCAGGCCCTaGAAGGTCTCGGGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: SYTISCFSLLTLKPTATTSFTRP*KVSGAS
Trigger: GCTGGCACCCGAGACCTTCCAGGGCCTGGTGAAGCT...TGTCGTAGCTGTTGGCTTCAGGGTGAGAAGTGAGAAGCAGCTTATTGTATATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp CTCATATACAATAAGCTGCTTCTCACTTCTCACCCTGAAGCCAACAGCTACGACTCGTGGAACGCCTTGTaGTGGACCCACTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LIYNKLLLTSHPEANSYDSWNAL*WTHCSW
Trigger: CCAGCTGCAGTGGGTCCACCACAAGGCGTTCCACGA...GTCGTAGCTGTTGGCTTCAGGGTGAGAAGTGAGAAGCAGCTTATTGTATATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp CTCATATACAATAAGCTGCTTCTCACTTCTCACCCTGAAGCCAACAGCTACGACGTGTGTGACTTGATCTaGTGCGGGGACGCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: LIYNKLLLTSHPEANSYDVCDLI*CGDAGP
Trigger: GGGACCAGCGTCCCCGCACCAGATCAAGTCACACAC...GTCGTAGCTGTTGGCTTCAGGGTGAGAAGTGAGAAGCAGCTTATTGTATATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR TCA 90 bp AACTGCACCTTCTGTGAGAACCTCATTGCCCGGGATGAAGTTCTAGATTTCAGCACCCAGCCTCGTGGGTaGGCCTCATTTGTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: NCTFCENLIARDEVLDFSTQPRG*ASFVLL
Trigger: GAGAAGAACAAATGAGGCTCACCCACGAGGCTGGGT...GCTGAAATCTAGAACTTCATCCCGGGCAATGAGGTTCTCACAGAAGGTGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR TCA 90 bp CTCATATACAATAAGCTGCTTCTCACTTCTCACCCTGAAGCCAACAGCTACGACATTGGTCCCCCAAAGTaGCTCTTGCTGCCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: LIYNKLLLTSHPEANSYDIGPPK*LLLPPP
Trigger: AGGGGGAGGCAGCAAGAGTCACTTTGGGGGACCAAT...GTCGTAGCTGTTGGCTTCAGGGTGAGAAGTGAGAAGCAGCTTATTGTATATGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp ATTTCAGCCTCTGATGATCTTTCCTTTGGTAATTGGTTCTTGGACCCCAGCAGTGCAAAGTTGTGCGCCTaGCAGCTGACCGTCATGGGC +
Preference number: 4 (lower is better)
Translates to: ISASDDLSFGNWFLDPSSAKLCA*QLTVMG
Trigger: GCCCATGACGGTCAGCTGCCAGGCGCACAACTTTGC...ACTGCTGGGGTCCAAGAACCAATTACCAAAGGAAAGATCATCAGAGGCTGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp AAAGAAGAAAATAAATTCTGTTCCTTGGTGGACATGTGGCAGTGCTGGGTGCTGGGATGCCCTCCGGGATaGCTGCAAAGTTGTGCGCCT +
Preference number: 4 (lower is better)
Translates to: KEENKFCSLVDMWQCWVLGCPPG*LQSCAP
Trigger: AGGCGCACAACTTTGCAGCCATCCCGGAGGGCATCC...CAGCACCCAGCACTGCCACATGTCCACCAAGGAACAGAATTTATTTTCTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp CTCATATACAATAAGCTGCTTCTCACTTCTCACCCTGAAGCCAACAGCTACGACACACAGGGCCCTTGCTaGGTCACACACCAAACAGCC +
Preference number: 4 (lower is better)
Translates to: LIYNKLLLTSHPEANSYDTQGPC*VTHQTA
Trigger: GGCTGTTTGGTGTGTGACCCAGCAAGGGCCCTGTGT...GTCGTAGCTGTTGGCTTCAGGGTGAGAAGTGAGAAGCAGCTTATTGTATATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR TCA 90 bp CTCATATACAATAAGCTGCTTCTCACTTCTCACCCTGAAGCCAACAGCTACGACCCGAGAGGCTGTTGTTaGAGAGGAAGAGGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: LIYNKLLLTSHPEANSYDPRGCC*RGRGWS
Trigger: TGACCACCCTCTTCCTCTTCAACAACAGCCTCTCGG...GTCGTAGCTGTTGGCTTCAGGGTGAGAAGTGAGAAGCAGCTTATTGTATATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp TCATATACAATAAGCTGCTTCTCACTTCTCACCCTGAAGCCAACAGCTACGACAGCTGGAGGAGGCCGATaGGGTTGTTCTGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SYTISCFSLLTLKPTATTAGGGR*GCSAGR
Trigger: TCTTCCTGCAGAACAACCGCATCGGCCTCCTCCAGC...TGTCGTAGCTGTTGGCTTCAGGGTGAGAAGTGAGAAGCAGCTTATTGTATATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp CTCATATACAATAAGCTGCTTCTCACTTCTCACCCTGAAGCCAACAGCTACGACCACAGCTTGTTGCCGTaGAGAAACAGGTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LIYNKLLLTSHPEANSYDHSLLP*RNRWLR
Trigger: CCTCAGCCACCTGTTTCTCCACGGCAACAAGCTGTG...GTCGTAGCTGTTGGCTTCAGGGTGAGAAGTGAGAAGCAGCTTATTGTATATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp TCATATACAATAAGCTGCTTCTCACTTCTCACCCTGAAGCCAACAGCTACGACAGGCCACCCAGCCTCGTaGGTGAGCCTCATTTGTTCT +
Preference number: 4 (lower is better)
Translates to: SYTISCFSLLTLKPTATTGHPAS*VSLICS
Trigger: AGAACAAATGAGGCTCACCCACGAGGCTGGGTGGCC...TGTCGTAGCTGTTGGCTTCAGGGTGAGAAGTGAGAAGCAGCTTATTGTATATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp TCCTCTCTGGTGGGGGATTCAGGTTTGTGCAAAGCACAAAGGAGCTTGTACCCATTGGTAATTGGTTCTTaGACCCCAGCAGTTGGACCT +
Preference number: 4 (lower is better)
Translates to: SSLVGDSGLCKAQRSLYPLVIGS*TPAVGP
Trigger: AGGTCCAACTGCTGGGGTCCAAGAACCAATTACCAA...TGGGTACAAGCTCCTTTGTGCTTTGCACAAACCTGAATCCCCCACCAGAGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
3UTR CAA 72 bp GGCCCTTGGCAAGGCCAGGTCCCTTGGAGACTATCGTaGCCAGTTTGGGATTCTAGACAAAAATTCTATCAC +
Preference number: 4 (lower is better)
Translates to: GPWQGQVPWRLS*PVWDSRQKFYH
Trigger: GTGATAGAATTTTTGTCTAGAATCCCAAACTGGCAACGATAGTCTCCAAGGGACCTGGCCTTGCCAAGGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp TCATATACAATAAGCTGCTTCTCACTTCTCACCCTGAAGCCAACAGCTACGACATGCAGCTGGTTCTCGTaGAGCAAAAGACGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SYTISCFSLLTLKPTATTCSWFS*SKRRSR
Trigger: CCTGGACCGTCTTTTGCTGCACGAGAACCAGCTGCA...TGTCGTAGCTGTTGGCTTCAGGGTGAGAAGTGAGAAGCAGCTTATTGTATATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp GACGTACAGTTAGGTAACGGAGTGGGAGGGGGACTGTGCATTTGTGTATATATAAGGATGCACTTGGAGTaGCTTTTCCCACCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: DVQLGNGVGGGLCICVYIRMHLE*LFPPCQ
Trigger: CTGGCAAGGTGGGAAAAGGCACTCCAAGTGCATCCT...TATATATACACAAATGCACAGTCCCCCTCCCACTCCGTTACCTAACTGTACGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR TCA 90 bp TATACAATAAGCTGCTTCTCACTTCTCACCCTGAAGCCAACAGCTACGACAGCATGGGGTGGATGTAGGTaGTGTTGTTCGAGTAGATCC +
Preference number: 4 (lower is better)
Translates to: YTISCFSLLTLKPTATTAWGGCR*CCSSRS
Trigger: GGATCTACTCGAACAACATCACCTACATCCACCCCA...TGCTGTCGTAGCTGTTGGCTTCAGGGTGAGAAGTGAGAAGCAGCTTATTGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR TCA 90 bp TCATATACAATAAGCTGCTTCTCACTTCTCACCCTGAAGCCAACAGCTACGACATCTCACTTCTCACCCTaGAGCCAACAGCTACGACAG +
Preference number: 4 (lower is better)
Translates to: SYTISCFSLLTLKPTATTSHFSP*SQQLRQ
Trigger: CTGTCGTAGCTGTTGGCTTCAGGGTGAGAAGTGAGA...TGTCGTAGCTGTTGGCTTCAGGGTGAGAAGTGAGAAGCAGCTTATTGTATATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp CTCATATACAATAAGCTGCTTCTCACTTCTCACCCTGAAGCCAACAGCTACGACAGTGGAGGATGCACTTaGAGTGCCTTTTCCCACCTT +
Preference number: 4 (lower is better)
Translates to: LIYNKLLLTSHPEANSYDSGGCT*SAFSHL
Trigger: AAGGTGGGAAAAGGCACTCCAAGTGCATCCTCCACT...GTCGTAGCTGTTGGCTTCAGGGTGAGAAGTGAGAAGCAGCTTATTGTATATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp TCCTCTCTGGTGGGGGATTCAGGTTTGTGCAAAGCACAAAGGAGCTTGTACCCATCATATACAATAAGCTaGTTCTCACTTCTCACCCTG +
Preference number: 4 (lower is better)
Translates to: SSLVGDSGLCKAQRSLYPSYTIS*FSLLTL
Trigger: CAGGGTGAGAAGTGAGAAGCAGCTTATTGTATATGA...TGGGTACAAGCTCCTTTGTGCTTTGCACAAACCTGAATCCCCCACCAGAGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp TATACAATAAGCTGCTTCTCACTTCTCACCCTGAAGCCAACAGCTACGACAGCACTTGGAGACTATCGTTaGCAGTTTGGGATTCTAGAC +
Preference number: 4 (lower is better)
Translates to: YTISCFSLLTLKPTATTALGDYR*QFGILD
Trigger: GTCTAGAATCCCAAACTGGCAACGATAGTCTCCAAG...TGCTGTCGTAGCTGTTGGCTTCAGGGTGAGAAGTGAGAAGCAGCTTATTGTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR GCA 90 bp AAAGAAGAAAATAAATTCTGTTCCTTGGTGGACATGTGGCAGTGCTGGGTGCTGTCATTTGTTCTTCTCTaGGTCCTGCTTTCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: KEENKFCSLVDMWQCWVLSFVLL*VLLSPG
Trigger: TCCTGGAGAAAGCAGGACGCAGAGAAGAACAAATGA...CAGCACCCAGCACTGCCACATGTCCACCAAGGAACAGAATTTATTTTCTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CCA 90 bp AAAGAAGAAAATAAATTCTGTTCCTTGGTGGACATGTGGCAGTGCTGGGTGCTGCAGAAGTGCCTGAGATaGTTCATGAAATGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: KEENKFCSLVDMWQCWVLQKCLR*FMKCPH
Trigger: ATGAGGGCATTTCATGAACCATCTCAGGCACTTCTG...CAGCACCCAGCACTGCCACATGTCCACCAAGGAACAGAATTTATTTTCTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS CCA 90 bp CCGGGCCGGGGGCCGTGCGGGTGGCCCTTGCTCCTGGTGGGGCCGTaGGGTGAGTGGTGTTCCTTGCGGGCGGCCCTGTCGGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: PGRGPCGWPLLLVGP*GEWCSLRAALSVVV
Trigger: CACCACCACCGACAGGGCCGCCCGCAAGGAACACCACTCACCCCACGGCCCCACCAGGAGCAAGGGCCACCCGCACGGCCCCCGGCCCGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS CCA 90 bp GGGCCGTGCGGGTGGCCCTTGCTCCTGGTGGGGCCGTGGGGTGAGTaGTGTTCCTTGCGGGCGGCCCTGTCGGTGGTGGTGAGCGTGTGT +
Preference number: 5 (lower is better)
Translates to: GPCGWPLLLVGPWGE*CSLRAALSVVVSVC
Trigger: ACACACGCTCACCACCACCGACAGGGCCGCCCGCAAGGAACACCACTCACCCCACGGCCCCACCAGGAGCAAGGGCCACCCGCACGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS TCA 90 bp ATGTGGCAGTGCTGGGTGCTGACGCCCTGGGTCCTCAGCGGAGAGTaGCCGCCAGCCCCAGTGTCCAGGCCAGGAGGGAGGCCCCCAGGG +
Preference number: 5 (lower is better)
Translates to: MWQCWVLTPWVLSGE*PPAPVSRPGGRPPG
Trigger: CCCTGGGGGCCTCCCTCCTGGCCTGGACACTGGGGCTGGCGGTCACTCTCCGCTGAGGACCCAGGGCGTCAGCACCCAGCACTGCCACAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS GCA 90 bp GCGGGGCTGAAGTGGCCGGGCTGGAGGAGGCCGATGCGGTTGTTCTaGAGGAAGACGCGCTCGCTGTCCACGGGGATGCCCTCCGGGATG +
Preference number: 5 (lower is better)
Translates to: AGLKWPGWRRPMRLF*RKTRSLSTGMPSGM
Trigger: CATCCCGGAGGGCATCCCCGTGGACAGCGAGCGCGTCTTCCTGCAGAACAACCGCATCGGCCTCCTCCAGCCCGGCCACTTCAGCCCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS TCA 90 bp CGGGGATGCCCTCCGGGATGGCTGCAAAGTTGTGCGCCTGGCAGCTaGCCGTCATGGGCGCCGGGTAGCACACACAGTCCCGTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: RGCPPGWLQSCAPGS*PSWAPGSTHSPVGS
Trigger: GCTGCCCACGGGACTGTGTGTGCTACCCGGCGCCCATGACGGTCAGCTGCCAGGCGCACAACTTTGCAGCCATCCCGGAGGGCATCCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS GCA 90 bp CGGGCGGCCCTGTCGGTGGTGGTGAGCGTGTGTGACTTGATCTGGTaGGGGGACGCTGGTCCCGTGCAGTTCCGGAAGTCCTCGGCCCTC +
Preference number: 5 (lower is better)
Translates to: RAALSVVVSVCDLIW*GDAGPVQFRKSSAL
Trigger: GAGGGCCGAGGACTTCCGGAACTGCACGGGACCAGCGTCCCCGCACCAGATCAAGTCACACACGCTCACCACCACCGACAGGGCCGCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS CCA 90 bp GGTCGGCCTAGGCGCACTCCCTCCCGGGGTCCAGATTCAAATCCCTaGGCGCCAGCTGCAGCTAATCCGAGCGCGTCGAGGCGGGGGCAA +
Preference number: 5 (lower is better)
Translates to: GRPRRTPSRGPDSNP*APAAANPSASRRGQ
Trigger: TTGCCCCCGCCTCGACGCGCTCGGATTAGCTGCAGCTGGCGCCCAGGGATTTGAATCTGGACCCCGGGAGGGAGTGCGCCTAGGCCGACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS CCA 90 bp CTGGCAGCTGACCGTCATGGGCGCCGGGTAGCACACACAGTCCCGTaGGCAGCCACCACCCAGGGGCAGCTCCGCAGCTACCAACAGCAG +
Preference number: 5 (lower is better)
Translates to: LAADRHGRRVAHTVP*AATTQGQLRSYQQQ
Trigger: CTGCTGTTGGTAGCTGCGGAGCTGCCCCTGGGTGGTGGCTGCCCACGGGACTGTGTGTGCTACCCGGCGCCCATGACGGTCAGCTGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS GCA 90 bp CAGGAAGACGCGCTCGCTGTCCACGGGGATGCCCTCCGGGATGGCTaGAAAGTTGTGCGCCTGGCAGCTGACCGTCATGGGCGCCGGGTA +
Preference number: 5 (lower is better)
Translates to: QEDALAVHGDALRDG*KVVRLAADRHGRRV
Trigger: TACCCGGCGCCCATGACGGTCAGCTGCCAGGCGCACAACTTTGCAGCCATCCCGGAGGGCATCCCCGTGGACAGCGAGCGCGTCTTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS CCA 90 bp TTGCGGGCGGCCCTGTCGGTGGTGGTGAGCGTGTGTGACTTGATCTaGTGCGGGGACGCTGGTCCCGTGCAGTTCCGGAAGTCCTCGGCC +
Preference number: 5 (lower is better)
Translates to: LRAALSVVVSVCDLI*CGDAGPVQFRKSSA
Trigger: GGCCGAGGACTTCCGGAACTGCACGGGACCAGCGTCCCCGCACCAGATCAAGTCACACACGCTCACCACCACCGACAGGGCCGCCCGCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CAA 90 bp CCAGAGTGGACACTGTCCGTGGGCGCTCTGCGGGGCTGGCTGGGACAGCCGGCTCTGGGTCTGCCAGGGTaGCCTGAGACATCAGGAATG +
Preference number: 5 (lower is better)
Translates to: PEWTLSVGALRGWLGQPALGLPG*PETSGM
Trigger: CATTCCTGATGTCTCAGGCAACCCTGGCAGACCCAG...AGCCGGCTGTCCCAGCCAGCCCCGCAGAGCGCCCACGGACAGTGTCCACTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CAA 90 bp CAGACCTCTCGGAACGATCGGGATTCCACAGAGCCCCGGTGCCGCCGTCGGGGGTCCCACACAGGGCCCTaGCTGGGTCACACACCAAAC +
Preference number: 5 (lower is better)
Translates to: QTSRNDRDSTEPRCRRRGSHTGP*LGHTPN
Trigger: GTTTGGTGTGTGACCCAGCAAGGGCCCTGTGTGGGA...CCCCCGACGGCGGCACCGGGGCTCTGTGGAATCCCGATCGTTCCGAGAGGTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS TCA 90 bp GTGGTGTTCCTTGCGGGCGGCCCTGTCGGTGGTGGTGAGCGTGTGTaGCTTGATCTGGTGCGGGGACGCTGGTCCCGTGCAGTTCCGGAA +
Preference number: 5 (lower is better)
Translates to: VVFLAGGPVGGGERV*LDLVRGRWSRAVPE
Trigger: TTCCGGAACTGCACGGGACCAGCGTCCCCGCACCAGATCAAGTCACACACGCTCACCACCACCGACAGGGCCGCCCGCAAGGAACACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS CCA 90 bp AGCCTGCGGAGGTCGTGGAACGCCTTGTGGTGGACCCACTGCAGCTaGTTCTCGTGCAGCAAAAGACGGTCCAGGTTCACCAGGCCCCGG +
Preference number: 5 (lower is better)
Translates to: SLRRSWNALWWTHCS*FSCSKRRSRFTRPR
Trigger: CCGGGGCCTGGTGAACCTGGACCGTCTTTTGCTGCACGAGAACCAGCTGCAGTGGGTCCACCACAAGGCGTTCCACGACCTCCGCAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CAA 90 bp TGCCGCCGTCGGGGGCAATTGTCCCACTGTTGCCAGTGGAGGATGCACTTGGAGCCACAGTCCCAGGGGTaGCCGTTGAGGCGGAGGAAC +
Preference number: 5 (lower is better)
Translates to: CRRRGQLSHCCQWRMHLEPQSQG*PLRRRN
Trigger: GTTCCTCCGCCTCAACGGCAACCCCTGGGACTGTGG...CTCCAAGTGCATCCTCCACTGGCAACAGTGGGACAATTGCCCCCGACGGCGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CAA 90 bp CTCCTGCTGTCCCACACAGGGCCCTTGCTGGGTCACACACCAAACAGCCTCAAGGGTGAGTGGTGTTCCTaGCGGGCGGCCCTGTCGGTG +
Preference number: 5 (lower is better)
Translates to: LLLSHTGPLLGHTPNSLKGEWCS*RAALSV
Trigger: CACCGACAGGGCCGCCCGCAAGGAACACCACTCACC...CTTGAGGCTGTTTGGTGTGTGACCCAGCAAGGGCCCTGTGTGGGACAGCAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS CCA 90 bp CCGGGCCGTAGGCATGATGTCAAAACTGAACTTGTGCTGGTAGTCTaGGGCATAGTCTGGCAGCTCGGGGGCCTGTTTCCCGGCGCCCGC +
Preference number: 5 (lower is better)
Translates to: PGRRHDVKTELVLVV*GIVWQLGGLFPGAR
Trigger: GCGGGCGCCGGGAAACAGGCCCCCGAGCTGCCAGACTATGCCCCAGACTACCAGCACAAGTTCAGTTTTGACATCATGCCTACGGCCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CAA 90 bp CTCCTGCTGTCCCACACAGGGCCCTTGCTGGGTCACACACCAAACAGCCTCAAGCACTTGCCCTTCCTCTaGGGCCGGGCCGTAGGCATG +
Preference number: 5 (lower is better)
Translates to: LLLSHTGPLLGHTPNSLKHLPFL*GRAVGM
Trigger: CATGCCTACGGCCCGGCCCAAGAGGAAGGGCAAGTG...CTTGAGGCTGTTTGGTGTGTGACCCAGCAAGGGCCCTGTGTGGGACAGCAGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CAA 90 bp CTTGGACCCCAGCAGTTGGACCTGGGTCTGCCAGGGTTGCCTGAGACATCAGGACGCCGTCGGGGGCAATaGTCCCACTGTTGCCAGTGG +
Preference number: 5 (lower is better)
Translates to: LGPQQLDLGLPGLPETSGRRRGQ*SHCCQW
Trigger: CCACTGGCAACAGTGGGACAATTGCCCCCGACGGCG...TCCTGATGTCTCAGGCAACCCTGGCAGACCCAGGTCCAACTGCTGGGGTCCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CAA 90 bp GGGTCCAGACGTCCAGACAGCAGCCGAAGGCTCTACCAGCCTTTTCCTGAAACCAAGCCCGGAGTCTCCTaGGCCCGTCCAGGCCGTCAC +
Preference number: 5 (lower is better)
Translates to: GSRRPDSSRRLYQPFPETKPGVS*ARPGRH
Trigger: GTGACGGCCTGGACGGGCCAAGGAGACTCCGGGCTT...GGTTTCAGGAAAAGGCTGGTAGAGCCTTCGGCTGCTGTCTGGACGTCTGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS GCA 90 bp GTGGTCAGCCTGCGGAGGTCGTGGAACGCCTTGTGGTGGACCCACTaGAGCTGGTTCTCGTGCAGCAAAAGACGGTCCAGGTTCACCAGG +
Preference number: 5 (lower is better)
Translates to: VVSLRRSWNALWWTH*SWFSCSKRRSRFTR
Trigger: CCTGGTGAACCTGGACCGTCTTTTGCTGCACGAGAACCAGCTGCAGTGGGTCCACCACAAGGCGTTCCACGACCTCCGCAGGCTGACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS CCA 90 bp AGGAAGAGGGTGGTCAGCCTGCGGAGGTCGTGGAACGCCTTGTGGTaGACCCACTGCAGCTGGTTCTCGTGCAGCAAAAGACGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: RKRVVSLRRSWNALW*THCSWFSCSKRRSR
Trigger: CCTGGACCGTCTTTTGCTGCACGAGAACCAGCTGCAGTGGGTCCACCACAAGGCGTTCCACGACCTCCGCAGGCTGACCACCCTCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CAA 90 bp CACCCAGCCTCGTGGGTGAGCCTCATTTGTTCTTCTCTGCGTCCTGCTTTCTCCCCTTTGCGAAGCATGTaGGCCACGGGGCCGCCGCTC +
Preference number: 5 (lower is better)
Translates to: HPASWVSLICSSLRPAFSPLRSM*ATGPPL
Trigger: GAGCGGCGGCCCCGTGGCCAACATGCTTCGCAAAGG...GGAGAAAGCAGGACGCAGAGAAGAACAAATGAGGCTCACCCACGAGGCTGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS CCA 90 bp AAGAGGAAGAGGGTGGTCAGCCTGCGGAGGTCGTGGAACGCCTTGTaGTGGACCCACTGCAGCTGGTTCTCGTGCAGCAAAAGACGGTCC +
Preference number: 5 (lower is better)
Translates to: KRKRVVSLRRSWNAL*WTHCSWFSCSKRRS
Trigger: GGACCGTCTTTTGCTGCACGAGAACCAGCTGCAGTGGGTCCACCACAAGGCGTTCCACGACCTCCGCAGGCTGACCACCCTCTTCCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CAA 90 bp TGCCGCCGTCGGGGGCAATTGTCCCACTGTTGCCAGTGGAGGATGCACTTGGAGCCCAGACTCCACAGCTaGTTGCCGTGGAGAAACAGG +
Preference number: 5 (lower is better)
Translates to: CRRRGQLSHCCQWRMHLEPRLHS*LPWRNR
Trigger: CCTGTTTCTCCACGGCAACAAGCTGTGGAGTCTGGG...CTCCAAGTGCATCCTCCACTGGCAACAGTGGGACAATTGCCCCCGACGGCGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CAA 90 bp CCAGACGTCCAGACAGCAGCCGAAGGCTCTACCAGCCTTTTCCTGAAACCCAGCAGGTCGTGGAACGCCTaGTGGTGGACCCACTGCAGC +
Preference number: 5 (lower is better)
Translates to: PDVQTAAEGSTSLFLKPSRSWNA*WWTHCS
Trigger: GCTGCAGTGGGTCCACCACAAGGCGTTCCACGACCT...GCTGGGTTTCAGGAAAAGGCTGGTAGAGCCTTCGGCTGCTGTCTGGACGTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CAA 90 bp CCAGACGTCCAGACAGCAGCCGAAGGCTCTACCAGCCTTTTCCTGAAACCCAGCTTGCGGTTCCTGGGGTaGGTGCAGTTCTTCCCCGGC +
Preference number: 5 (lower is better)
Translates to: PDVQTAAEGSTSLFLKPSLRFLG*VQFFPG
Trigger: GCCGGGGAAGAACTGCACCAACCCCAGGAACCGCAA...GCTGGGTTTCAGGAAAAGGCTGGTAGAGCCTTCGGCTGCTGTCTGGACGTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CAA 90 bp CTCCTGCTGTCCCACACAGGGCCCTTGCTGGGTCACACACCAAACAGCCTCAAGAAAGCACAAAGGAGCTaGTACCCACCTGGGCCCCCG +
Preference number: 5 (lower is better)
Translates to: LLLSHTGPLLGHTPNSLKKAQRS*YPPGPP
Trigger: CGGGGGCCCAGGTGGGTACAAGCTCCTTTGTGCTTT...CTTGAGGCTGTTTGGTGTGTGACCCAGCAAGGGCCCTGTGTGGGACAGCAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CAA 90 bp ACCCACCTGGGCCCCCGGCCAGCAGCACGGCCGGCTTTGATCGGAGCCCCTCTTCTGATGATCTTTCCTTaGGTAATTGGTTCTTGGACC +
Preference number: 5 (lower is better)
Translates to: THLGPRPAARPALIGAPLLMIFP*VIGSWT
Trigger: GGTCCAAGAACCAATTACCAAAGGAAAGATCATCAG...AAGAGGGGCTCCGATCAAAGCCGGCCGTGCTGCTGGCCGGGGGCCCAGGTGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CAA 90 bp TGCTTTCTCCAGGAACCACGGGGCCCTCCAGACCTCTCGGAACGATCGGGATTCGCAAGGCCAGGTCCCTaGGAGACTATCGTTGCCAGT +
Preference number: 5 (lower is better)
Translates to: CFLQEPRGPPDLSERSGFARPGP*ETIVAS
Trigger: ACTGGCAACGATAGTCTCCAAGGGACCTGGCCTTGC...GAATCCCGATCGTTCCGAGAGGTCTGGAGGGCCCCGTGGTTCCTGGAGAAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CAA 90 bp ATTCAGGGCAGGGTGACTGGCCTCAGGCAAGAGCCAAGATGCCACCTGCTCGTGAGCTCCGAGAGGCTGTaGTTGAAGAGGAAGAGGGTG +
Preference number: 5 (lower is better)
Translates to: IQGRVTGLRQEPRCHLLVSSERL*LKRKRV
Trigger: CACCCTCTTCCTCTTCAACAACAGCCTCTCGGAGCT...CACGAGCAGGTGGCATCTTGGCTCTTGCCTGAGGCCAGTCACCCTGCCCTGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CAA 90 bp TATACAATAAGCTGCTTCTCACTTCTCACCCTGAAGCCAACAGCTACGACAGCACCGTGCGGGTGGCCCTaGCTCCTGGTGGGGCCGTGG +
Preference number: 5 (lower is better)
Translates to: YTISCFSLLTLKPTATTAPCGWP*LLVGPW
Trigger: CCACGGCCCCACCAGGAGCAAGGGCCACCCGCACGG...TGCTGTCGTAGCTGTTGGCTTCAGGGTGAGAAGTGAGAAGCAGCTTATTGTATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS TCA 90 bp AAAATAAATTCTGTTCCTTGGTGGACATGTGGCAGTGCTGGGTGCTaGCGCCCTGGGTCCTCAGCGGAGAGTGACCGCCAGCCCCAGTGT +
Preference number: 5 (lower is better)
Translates to: KINSVPWWTCGSAGC*RPGSSAESDRQPQC
Trigger: ACACTGGGGCTGGCGGTCACTCTCCGCTGAGGACCCAGGGCGTCAGCACCCAGCACTGCCACATGTCCACCAAGGAACAGAATTTATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CAA 90 bp TGCCTGAGATGGTTCATGAAATGCCCTCATTGTTCCCCTTCTGCTAAGGCCCCCGGGATGGCTGCAAAGTaGTGCGCCTGGCAGCTGACC +
Preference number: 5 (lower is better)
Translates to: CLRWFMKCPHCSPSAKAPGMAAK*CAWQLT
Trigger: GGTCAGCTGCCAGGCGCACAACTTTGCAGCCATCCC...GGGGGCCTTAGCAGAAGGGGAACAATGAGGGCATTTCATGAACCATCTCAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CAA 90 bp CGCTCACCCTCGGGGCCTGGCTCCCTCATATACAATAAGCTGCTTCTCACTTCTTCCACACAGCACCCTTaGCGAAGCATGTTGGCCACG +
Preference number: 5 (lower is better)
Translates to: RSPSGPGSLIYNKLLLTSSTQHP*RSMLAT
Trigger: CGTGGCCAACATGCTTCGCAAAGGGTGCTGTGTGGA...AGAAGTGAGAAGCAGCTTATTGTATATGAGGGAGCCAGGCCCCGAGGGTGAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CAA 90 bp CTCATATACAATAAGCTGCTTCTCACTTCTCACCCTGAAGCCAACAGCTACGACTCCCAGGGGTTGCCGTaGAGGCGGAGGAACTCCAGG +
Preference number: 5 (lower is better)
Translates to: LIYNKLLLTSHPEANSYDSQGLP*RRRNSR
Trigger: CCTGGAGTTCCTCCGCCTCAACGGCAACCCCTGGGA...GTCGTAGCTGTTGGCTTCAGGGTGAGAAGTGAGAAGCAGCTTATTGTATATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CAA 90 bp TCATATACAATAAGCTGCTTCTCACTTCTCACCCTGAAGCCAACAGCTACGACAGTCCTGCGGGCACACTaGCCCTTCCTCTTGGGCCGG +
Preference number: 5 (lower is better)
Translates to: SYTISCFSLLTLKPTATTVLRAH*PFLLGR
Trigger: CCGGCCCAAGAGGAAGGGCAAGTGTGCCCGCAGGAC...TGTCGTAGCTGTTGGCTTCAGGGTGAGAAGTGAGAAGCAGCTTATTGTATATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CAA 90 bp AAAGAAGAAAATAAATTCTGTTCCTTGGTGGACATGTGGCAGTGCTGGGTGCTGGCAGCACGGCCGGCTTaGATCGGAGCCCCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: KEENKFCSLVDMWQCWVLAARPA*IGAPLP
Trigger: GGGAAGAGGGGCTCCGATCAAAGCCGGCCGTGCTGC...CAGCACCCAGCACTGCCACATGTCCACCAAGGAACAGAATTTATTTTCTTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CAA 90 bp GGGTCCAGACGTCCAGACAGCAGCCGAAGGCTCTACCAGCCTTTTCCTGAAACCAATAAATTCTGTTCCTaGGTGGACATGTGGCAGTGC +
Preference number: 5 (lower is better)
Translates to: GSRRPDSSRRLYQPFPETNKFCS*VDMWQC
Trigger: GCACTGCCACATGTCCACCAAGGAACAGAATTTATT...GGTTTCAGGAAAAGGCTGGTAGAGCCTTCGGCTGCTGTCTGGACGTCTGGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CAA 90 bp GTCGGGGGCAATTGTCCCACTGTTGCCAGTGGAGGATGCACTTGGAGTGCCTTTCCTTGGAGACTATCGTaGCCAGTTTGGGATTCTAGA +
Preference number: 5 (lower is better)
Translates to: VGGNCPTVASGGCTWSAFPWRLS*PVWDSR
Trigger: TCTAGAATCCCAAACTGGCAACGATAGTCTCCAAGG...AAAGGCACTCCAAGTGCATCCTCCACTGGCAACAGTGGGACAATTGCCCCCGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CAA 90 bp AAAGAAGAAAATAAATTCTGTTCCTTGGTGGACATGTGGCAGTGCTGGGTGCTGAGGAGGCCGATGCGGTaGTTCTGCAGGAAGACGCGC +
Preference number: 5 (lower is better)
Translates to: KEENKFCSLVDMWQCWVLRRPMR*FCRKTR
Trigger: GCGCGTCTTCCTGCAGAACAACCGCATCGGCCTCCT...CAGCACCCAGCACTGCCACATGTCCACCAAGGAACAGAATTTATTTTCTTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CAA 90 bp GTCTTCCGTGATGCAGAAGTGCCTGAGATGGTTCATGAAATGCCCTCATTGTTCAGACTCCACAGCTTGTaGCCGTGGAGAAACAGGTGG +
Preference number: 5 (lower is better)
Translates to: VFRDAEVPEMVHEMPSLFRLHSL*PWRNRW
Trigger: CCACCTGTTTCTCCACGGCAACAAGCTGTGGAGTCT...GAACAATGAGGGCATTTCATGAACCATCTCAGGCACTTCTGCATCACGGAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CAA 90 bp AAAGAAGAAAATAAATTCTGTTCCTTGGTGGACATGTGGCAGTGCTGGGTGCTGGTGAGCGTGTGTGACTaGATCTGGTGCGGGGACGCT +
Preference number: 5 (lower is better)
Translates to: KEENKFCSLVDMWQCWVLVSVCD*IWCGDA
Trigger: AGCGTCCCCGCACCAGATCAAGTCACACACGCTCAC...CAGCACCCAGCACTGCCACATGTCCACCAAGGAACAGAATTTATTTTCTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CAA 90 bp TCATATACAATAAGCTGCTTCTCACTTCTCACCCTGAAGCCAACAGCTACGACAAACAGGTGGCTGAGGTaGACCAGGTCCACGAAGATG +
Preference number: 5 (lower is better)
Translates to: SYTISCFSLLTLKPTATTNRWLR*TRSTKM
Trigger: CATCTTCGTGGACCTGGTCAACCTCAGCCACCTGTT...TGTCGTAGCTGTTGGCTTCAGGGTGAGAAGTGAGAAGCAGCTTATTGTATATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CAA 90 bp TCATATACAATAAGCTGCTTCTCACTTCTCACCCTGAAGCCAACAGCTACGACAGCAATTGTCCCACTGTaGCCAGTGGAGGATGCACTT +
Preference number: 5 (lower is better)
Translates to: SYTISCFSLLTLKPTATTAIVPL*PVEDAL
Trigger: AAGTGCATCCTCCACTGGCAACAGTGGGACAATTGC...TGTCGTAGCTGTTGGCTTCAGGGTGAGAAGTGAGAAGCAGCTTATTGTATATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CAA 90 bp CTCATATACAATAAGCTGCTTCTCACTTCTCACCCTGAAGCCAACAGCTACGACTTTGGTAATTGGTTCTaGGACCCCAGCAGTTGGACC +
Preference number: 5 (lower is better)
Translates to: LIYNKLLLTSHPEANSYDFGNWF*DPSSWT
Trigger: GGTCCAACTGCTGGGGTCCAAGAACCAATTACCAAA...GTCGTAGCTGTTGGCTTCAGGGTGAGAAGTGAGAAGCAGCTTATTGTATATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS-3UTR CAA 90 bp GTCTTCCGTGATGCAGAAGTGCCTGAGATGGTTCATGAAATGCCCTCATTGTTCAAATATCTAAGAATATaGGTCCCCCAAAGTGACTCT +
Preference number: 5 (lower is better)
Translates to: VFRDAEVPEMVHEMPSLFKYLRI*VPQSDS
Trigger: AGAGTCACTTTGGGGGACCAATATTCTTAGATATTT...GAACAATGAGGGCATTTCATGAACCATCTCAGGCACTTCTGCATCACGGAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS GCA 72 bp CGAGCGGCTTGCTCCGCGGAGCCGGCGGCCTGCTTCTaGCACCCGGAGCACTTCGCAGGCGGTTTTGAGGGG +
Preference number: 6 (lower is better)
Translates to: RAACSAEPAACF*HPEHFAGGFEG
Trigger: CCCCTCAAAACCGCCTGCGAAGTGCTCCGGGTGGCAGAAGCAGGCCGCCGGCTCCGCGGAGCAAGCCGCTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS CAA 72 bp CCGCTGGGGGCACGGATGGGGGTCCTGCGGGCACACTaGCCCTTCCTCTTGGGCCGGGCCGTAGGCATGATG +
Preference number: 6 (lower is better)
Translates to: PLGARMGVLRAH*PFLLGRAVGMM
Trigger: CATCATGCCTACGGCCCGGCCCAAGAGGAAGGGCAAGTGTGCCCGCAGGACCCCCATCCGTGCCCCCAGCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS CAA 90 bp ACCATGGCGGGGCTGAAGTGGCCGGGCTGGAGGAGGCCGATGCGGTaGTTCTGCAGGAAGACGCGCTCGCTGTCCACGGGGATGCCCTCC +
Preference number: 6 (lower is better)
Translates to: TMAGLKWPGWRRPMR*FCRKTRSLSTGMPS
Trigger: GGAGGGCATCCCCGTGGACAGCGAGCGCGTCTTCCTGCAGAACAACCGCATCGGCCTCCTCCAGCCCGGCCACTTCAGCCCCGCCATGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS CAA 72 bp CTGTCCACGGGGATGCCCTCCGGGATGGCTGCAAAGTaGTGCGCCTGGCAGCTGACCGTCATGGGCGCCGGG +
Preference number: 6 (lower is better)
Translates to: LSTGMPSGMAAK*CAWQLTVMGAG
Trigger: CCCGGCGCCCATGACGGTCAGCTGCCAGGCGCACAACTTTGCAGCCATCCCGGAGGGCATCCCCGTGGACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS CAA 72 bp GGGCTGAAGTGGCCGGGCTGGAGGAGGCCGATGCGGTaGTTCTGCAGGAAGACGCGCTCGCTGTCCACGGGG +
Preference number: 6 (lower is better)
Translates to: GLKWPGWRRPMR*FCRKTRSLSTG
Trigger: CCCCGTGGACAGCGAGCGCGTCTTCCTGCAGAACAACCGCATCGGCCTCCTCCAGCCCGGCCACTTCAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS TCA 72 bp CTTGCGGGCGGCCCTGTCGGTGGTGGTGAGCGTGTGTaGCTTGATCTGGTGCGGGGACGCTGGTCCCGTGCA +
Preference number: 6 (lower is better)
Translates to: LAGGPVGGGERV*LDLVRGRWSRA
Trigger: TGCACGGGACCAGCGTCCCCGCACCAGATCAAGTCACACACGCTCACCACCACCGACAGGGCCGCCCGCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS GCA 72 bp GCGCTCGCTGTCCACGGGGATGCCCTCCGGGATGGCTaGAAAGTTGTGCGCCTGGCAGCTGACCGTCATGGG +
Preference number: 6 (lower is better)
Translates to: ALAVHGDALRDG*KVVRLAADRHG
Trigger: CCCATGACGGTCAGCTGCCAGGCGCACAACTTTGCAGCCATCCCGGAGGGCATCCCCGTGGACAGCGAGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS GCA 72 bp AAGTGGCCGGGCTGGAGGAGGCCGATGCGGTTGTTCTaGAGGAAGACGCGCTCGCTGTCCACGGGGATGCCC +
Preference number: 6 (lower is better)
Translates to: KWPGWRRPMRLF*RKTRSLSTGMP
Trigger: GGGCATCCCCGTGGACAGCGAGCGCGTCTTCCTGCAGAACAACCGCATCGGCCTCCTCCAGCCCGGCCACTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS GCA 72 bp ACACAGGGGACAGCGGAGCTGGAGCCCCGGAACCTCTaGAGCCATTCCCACAGGGAGCGCGCGCGACAACCA +
Preference number: 6 (lower is better)
Translates to: TQGTAELEPRNL*SHSHRERARQP
Trigger: TGGTTGTCGCGCGCGCTCCCTGTGGGAATGGCTGCAGAGGTTCCGGGGCTCCAGCTCCGCTGTCCCCTGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS CCA 72 bp AGGCGCACTCCCTCCCGGGGTCCAGATTCAAATCCCTaGGCGCCAGCTGCAGCTAATCCGAGCGCGTCGAGG +
Preference number: 6 (lower is better)
Translates to: RRTPSRGPDSNP*APAAANPSASR
Trigger: CCTCGACGCGCTCGGATTAGCTGCAGCTGGCGCCCAGGGATTTGAATCTGGACCCCGGGAGGGAGTGCGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS CAA 90 bp TGTTCCTTGCGGGCGGCCCTGTCGGTGGTGGTGAGCGTGTGTGACTaGATCTGGTGCGGGGACGCTGGTCCCGTGCAGTTCCGGAAGTCC +
Preference number: 6 (lower is better)
Translates to: CSLRAALSVVVSVCD*IWCGDAGPVQFRKS
Trigger: GGACTTCCGGAACTGCACGGGACCAGCGTCCCCGCACCAGATCAAGTCACACACGCTCACCACCACCGACAGGGCCGCCCGCAAGGAACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS TCA 72 bp TGTGCAGGCCGCCAAAGACGCCGGCCGGCAAGGCGCTaGGCCCACACTTGTAGAGGTAGAGGGCGTGAAGCT +
Preference number: 6 (lower is better)
Translates to: CAGRQRRRPARR*AHTCRGRGREA
Trigger: AGCTTCACGCCCTCTACCTCTACAAGTGTGGGCTCAGCGCCTTGCCGGCCGGCGTCTTTGGCGGCCTGCACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS GCA 72 bp TGTTCTGCAGGAAGACGCGCTCGCTGTCCACGGGGATaGCCTCCGGGATGGCTGCAAAGTTGTGCGCCTGGC +
Preference number: 6 (lower is better)
Translates to: CSAGRRARCPRG*PPGWLQSCAPG
Trigger: GCCAGGCGCACAACTTTGCAGCCATCCCGGAGGGCATCCCCGTGGACAGCGAGCGCGTCTTCCTGCAGAACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS CCA 72 bp GCCCTGTCGGTGGTGGTGAGCGTGTGTGACTTGATCTaGTGCGGGGACGCTGGTCCCGTGCAGTTCCGGAAG +
Preference number: 6 (lower is better)
Translates to: ALSVVVSVCDLI*CGDAGPVQFRK
Trigger: CTTCCGGAACTGCACGGGACCAGCGTCCCCGCACCAGATCAAGTCACACACGCTCACCACCACCGACAGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS TCA 72 bp TCGGGGGCCTGTTTCCCGGCGCCCGCCTTAGAGATCTaGTTGCGGTTCCTGGGGTTGGTGCAGTTCTTCCCC +
Preference number: 6 (lower is better)
Translates to: SGACFPAPALEI*LRFLGLVQFFP
Trigger: GGGGAAGAACTGCACCAACCCCAGGAACCGCAATCAGATCTCTAAGGCGGGCGCCGGGAAACAGGCCCCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS TCA 72 bp TCTGTTCCTTGGTGGACATGTGGCAGTGCTGGGTGCTaGCGCCCTGGGTCCTCAGCGGAGAGTGACCGCCAG +
Preference number: 6 (lower is better)
Translates to: SVPWWTCGSAGC*RPGSSAESDRQ
Trigger: CTGGCGGTCACTCTCCGCTGAGGACCCAGGGCGTCAGCACCCAGCACTGCCACATGTCCACCAAGGAACAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS CAA 72 bp AAGAGGGTGGTCAGCCTGCGGAGGTCGTGGAACGCCTaGTGGTGGACCCACTGCAGCTGGTTCTCGTGCAGC +
Preference number: 6 (lower is better)
Translates to: KRVVSLRRSWNA*WWTHCSWFSCS
Trigger: GCTGCACGAGAACCAGCTGCAGTGGGTCCACCACAAGGCGTTCCACGACCTCCGCAGGCTGACCACCCTCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS GCA 72 bp CTGCGGAGGTCGTGGAACGCCTTGTGGTGGACCCACTaGAGCTGGTTCTCGTGCAGCAAAAGACGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: LRRSWNALWWTH*SWFSCSKRRSR
Trigger: CCTGGACCGTCTTTTGCTGCACGAGAACCAGCTGCAGTGGGTCCACCACAAGGCGTTCCACGACCTCCGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS CCA 72 bp AGGGTGGTCAGCCTGCGGAGGTCGTGGAACGCCTTGTaGTGGACCCACTGCAGCTGGTTCTCGTGCAGCAAA +
Preference number: 6 (lower is better)
Translates to: RVVSLRRSWNAL*WTHCSWFSCSK
Trigger: TTTGCTGCACGAGAACCAGCTGCAGTGGGTCCACCACAAGGCGTTCCACGACCTCCGCAGGCTGACCACCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS CCA 72 bp GTGGTCAGCCTGCGGAGGTCGTGGAACGCCTTGTGGTaGACCCACTGCAGCTGGTTCTCGTGCAGCAAAAGA +
Preference number: 6 (lower is better)
Translates to: VVSLRRSWNALW*THCSWFSCSKR
Trigger: TCTTTTGCTGCACGAGAACCAGCTGCAGTGGGTCCACCACAAGGCGTTCCACGACCTCCGCAGGCTGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS CCA 72 bp AGGTCGTGGAACGCCTTGTGGTGGACCCACTGCAGCTaGTTCTCGTGCAGCAAAAGACGGTCCAGGTTCACC +
Preference number: 6 (lower is better)
Translates to: RSWNALWWTHCS*FSCSKRRSRFT
Trigger: GGTGAACCTGGACCGTCTTTTGCTGCACGAGAACCAGCTGCAGTGGGTCCACCACAAGGCGTTCCACGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS CAA 90 bp CCCAGACTCCACAGCTTGTTGCCGTGGAGAAACAGGTGGCTGAGGTaGACCAGGTCCACGAAGATGTCGTCCTGGAGGTACTCGATGTGG +
Preference number: 6 (lower is better)
Translates to: PRLHSLLPWRNRWLR*TRSTKMSSWRYSMW
Trigger: CCACATCGAGTACCTCCAGGACGACATCTTCGTGGACCTGGTCAACCTCAGCCACCTGTTTCTCCACGGCAACAAGCTGTGGAGTCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS CAA 72 bp CACAGCTTGTTGCCGTGGAGAAACAGGTGGCTGAGGTaGACCAGGTCCACGAAGATGTCGTCCTGGAGGTAC +
Preference number: 6 (lower is better)
Translates to: HSLLPWRNRWLR*TRSTKMSSWRY
Trigger: GTACCTCCAGGACGACATCTTCGTGGACCTGGTCAACCTCAGCCACCTGTTTCTCCACGGCAACAAGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS GCA 72 bp GAAAATAAATTCTGTTCCTTGGTGGACATGTGGCAGTaGTGGGTGCTGACGCCCTGGGTCCTCAGCGGAGAG +
Preference number: 6 (lower is better)
Translates to: ENKFCSLVDMWQ*WVLTPWVLSGE
Trigger: CTCTCCGCTGAGGACCCAGGGCGTCAGCACCCAGCACTGCCACATGTCCACCAAGGAACAGAATTTATTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS CCA 72 bp AGGCATGATGTCAAAACTGAACTTGTGCTGGTAGTCTaGGGCATAGTCTGGCAGCTCGGGGGCCTGTTTCCC +
Preference number: 6 (lower is better)
Translates to: RHDVKTELVLVV*GIVWQLGGLFP
Trigger: GGGAAACAGGCCCCCGAGCTGCCAGACTATGCCCCAGACTACCAGCACAAGTTCAGTTTTGACATCATGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331238.7
CDS CCA 72 bp AAAGAAGAAAATAAATTCTGTTCCTTGGTGGACATGTaGCAGTGCTGGGTGCTGACGCCCTGGGTCCTCAGC +
Preference number: 6 (lower is better)
Translates to: KEENKFCSLVDM*QCWVLTPWVLS
Trigger: GCTGAGGACCCAGGGCGTCAGCACCCAGCACTGCCACATGTCCACCAAGGAACAGAATTTATTTTCTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331238.7