RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RTN4R (Homo sapiens)

Ensembl gene IDs: ENSG00000040608

Ensembl transcript IDs: ENST00000043402.8, ENST00000416372.5, ENST00000425986.1, ENST00000469601.1, ENST00000474642.1

Found 350 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGCCTaGCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGA +
Preference number: 1 (lower is better)
Translates to: GWRAAGVHQGGPGLA*PTGRPPGWLGGVER
Trigger: TCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGCCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
3UTR CCA 90 bp GAACAAACGCTGCCGCCGAACCCTGTAAACATGATGGGGTGGAGATaGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTG +
Preference number: 1 (lower is better)
Translates to: EQTLPPNPVNMMGWR*GWRAAGVHQGGPGL
Trigger: CAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCCACCCCATCATGTTTACAGGGTTCGGCGGCAGCGTTTGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
3UTR CCA 90 bp GTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGATGGGGTaGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCT +
Preference number: 1 (lower is better)
Translates to: VLEQTLPPNPVNMMG*RWGWRAAGVHQGGP
Trigger: AGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCCACCCCATCATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
3UTR-3UTR CCA 90 bp ACCGCGATCTGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGCCGCCCGGCTGGCTTaGCGGCGTGGAGAGAGACCC +
Preference number: 2 (lower is better)
Translates to: TAIWVGGGVLEQTLPPNPAARLA*RRGERP
Trigger: GGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGC...AGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCAGATCGCGGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
3UTR-3UTR CCA 90 bp GGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGCCTGCTGGCTTGGCGGCGTaGAGAGAGACCCCGTATGTA +
Preference number: 2 (lower is better)
Translates to: GDGGGGRQASIREDLAWPAGLAA*RETPYV
Trigger: TACATACGGGGTCTCTCTCCACGCCGCCAAGCCAGC...AGGCCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
3UTR-3UTR TCA 90 bp ACCGCGATCTGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTCACACACCTGGCTGCTaGGCACGCTCTTGTGTCCGC +
Preference number: 2 (lower is better)
Translates to: TAIWVGGGVLEQTLPPNPHTPGC*ARSCVR
Trigger: GCGGACACAAGAGCGTGCTCAGCAGCCAGGTGTGTG...AGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCAGATCGCGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
3UTR-3UTR CCA 90 bp ACCGCGATCTGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGCTGGCTTGGCGGCGTaGAGAGAGACCCCGTATGTA +
Preference number: 2 (lower is better)
Translates to: TAIWVGGGVLEQTLPPNPAGLAA*RETPYV
Trigger: TACATACGGGGTCTCTCTCCACGCCGCCAAGCCAGC...AGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCAGATCGCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
3UTR-3UTR CCA 90 bp GGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGATGGGGTGGGCTGGCTTGGCGGCGTaGAGAGAGACCCCGTATGTA +
Preference number: 2 (lower is better)
Translates to: GGVLEQTLPPNPVNMMGWAGLAA*RETPYV
Trigger: TACATACGGGGTCTCTCTCCACGCCGCCAAGCCAGC...CCACCCCATCATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
3UTR-3UTR TCA 90 bp ATAAAATGCATATCTCTATATACCGCGATCTGGGTGGGAGGCGGCGTTCTGGAACACACACCTGGCTGCTaGGCACGCTCTTGTGTCCGC +
Preference number: 2 (lower is better)
Translates to: IKCISLYTAIWVGGGVLEHTPGC*ARSCVR
Trigger: GCGGACACAAGAGCGTGCTCAGCAGCCAGGTGTGTG...TTCCAGAACGCCGCCTCCCACCCAGATCGCGGTATATAGAGATATGCATTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
3UTR-3UTR CAA 90 bp GGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGCCTGGCCGCCCGGCTGGCTaGGCGGCGTGGAGAGAGACC +
Preference number: 3 (lower is better)
Translates to: GDGGGGRQASIREDLAWPGRPAG*AAWRET
Trigger: GGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCC...AGGCCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
3UTR CCA 72 bp CCTGGCCTGGCCTGCCCCACGGGTCGGCCGCCCGGCTaGCTTGGCGGCGTGGAGAGAGACCCCGTATGTACA +
Preference number: 3 (lower is better)
Translates to: PGLACPTGRPPG*LGGVERDPVCT
Trigger: TGTACATACGGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGCCAGGCCAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
3UTR CCA 72 bp GCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTaGAGAGAGACCCCGTATGTACACACACCTGGCTGC +
Preference number: 3 (lower is better)
Translates to: APRVGRPAGLAA*RETPYVHTPGC
Trigger: GCAGCCAGGTGTGTGTACATACGGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
3UTR-3UTR CAA 90 bp CGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGATGGGGTGGAGGGCCGCCCGGCTGGCTaGGCGGCGTGGAGAGAGACC +
Preference number: 3 (lower is better)
Translates to: RRSGTNAAAEPCKHDGVEGRPAG*AAWRET
Trigger: GGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCC...CTCCACCCCATCATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp CCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCGGGTGGGGAACCCTGGTaGCTCGGAGCCCTCGGGCCG +
Preference number: 4 (lower is better)
Translates to: PAPRVGRPAGLAAWRETPGGEPW*LGALGP
Trigger: CGGCCCGAGGGCTCCGAGCCACCAGGGTTCCCCACC...CGGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp GCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCCCCCCGCTGCCTGCCTaGCCCAGACGGCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: ACPTGRPPGWLGGVERDPPPLPA*PRRQWL
Trigger: CAGCCACTGCCGTCTGGGCCAGGCAGGCAGCGGGGG...GGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGC
78% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp GCCTGGCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGCCCCCGCTGCCTGCCTaGCCCAGACGGCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: AWPAPRVGRPAGLAAWREPPLPA*PRRQWL
Trigger: CAGCCACTGCCGTCTGGGCCAGGCAGGCAGCGGGGG...CTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGCCAGGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp CCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCGGGTCGGCCGCCCGGCTaGCTTGGCGGCGTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: PAPRVGRPAGLAAWRETPGRPPG*LGGVER
Trigger: TCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACC...CGGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp GCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCAGGGAGGACCTGGCCTaGCCTGCCCCACGGGTCGGC +
Preference number: 4 (lower is better)
Translates to: ACPTGRPPGWLGGVERDPREDLA*PAPRVG
Trigger: GCCGACCCGTGGGGCAGGCCAGGCCAGGTCCTCCCT...GGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp GCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCGCAGGCACCTGGGCATaGGGCTGCCACCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: ACPTGRPPGWLGGVERDPAGTWA*GCHLPG
Trigger: GCCTGGCAGGTGGCAGCCCCATGCCCAGGTGCCTGC...GGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp CCTGGCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGAGCCGCCCGGCTGGCTTaGCGGCGTGGAGAGAGACCC +
Preference number: 4 (lower is better)
Translates to: PGLPHGSAARLAWRRGERAARLA*RRGERP
Trigger: GGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGC...TCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGCCAGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp CTGGCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACAGGGAGGACCTGGCCTaGCCTGCCCCACGGGTCGGC +
Preference number: 4 (lower is better)
Translates to: LACPTGRPPGWLGGVERDREDLA*PAPRVG
Trigger: GCCGACCCGTGGGGCAGGCCAGGCCAGGTCCTCCCT...GTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGCCAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR TCA 90 bp GGCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCGGTGCGGTTCTTGCGTaGACAGCCTGGCCTCCGGCG +
Preference number: 4 (lower is better)
Translates to: GLPHGSAARLAWRRGERPGAVLA*TAWPPA
Trigger: CGCCGGAGGCCAGGCTGTTCACGCAAGAACCGCACC...GGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR TCA 90 bp CCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCGGGTGCGGTTCTTGCGTaGACAGCCTGGCCTCCGGCG +
Preference number: 4 (lower is better)
Translates to: PAPRVGRPAGLAAWRETPGAVLA*TAWPPA
Trigger: CGCCGGAGGCCAGGCTGTTCACGCAAGAACCGCACC...CGGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp GCCTGGCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGGGCTGGCAGCAGGGATaGCCACGGGCACAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: AWPAPRVGRPAGLAAWREGWQQG*PRAQPA
Trigger: TGCAGGCTGTGCCCGTGGGCATCCCTGCTGCCAGCC...CTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGCCAGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp GGCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCGGCCCAGAGTGGGCGTaGCCGGCAGTCACACACCCA +
Preference number: 4 (lower is better)
Translates to: GLPHGSAARLAWRRGERPGPEWA*PAVTHP
Trigger: TGGGTGTGTGACTGCCGGGCACGCCCACTCTGGGCC...GGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp GCCTGGCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGGGCCCAGAGTGGGCGTaGCCGGCAGTCACACACCCA +
Preference number: 4 (lower is better)
Translates to: AWPAPRVGRPAGLAAWREGPEWA*PAVTHP
Trigger: TGGGTGTGTGACTGCCGGGCACGCCCACTCTGGGCC...CTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGCCAGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp GGCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCAGCCACAGCACCCATaGCAGCAGCCGGCTCCCTCG +
Preference number: 4 (lower is better)
Translates to: GLPHGSAARLAWRRGERPQPQHP*QQPAPS
Trigger: CGAGGGAGCCGGCTGCTGGCATGGGTGCTGTGGCTG...GGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416372.5
CDS-3UTR TCA 90 bp GCCTGGCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGGCAGCCACAGGATGGTaGGGTTGCGGCAGGCACGGA +
Preference number: 4 (lower is better)
Translates to: AWPAPRVGRPAGLAAWREAATGW*GCGRHG
Trigger: TCCGTGCCTGCCGCAACCTCACCATCCTGTGGCTGC...CTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGCCAGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR TCA 90 bp CTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCGTGGTGCGGTTCTTGCGTaGACAGCCTGGCCTCCGGCG +
Preference number: 4 (lower is better)
Translates to: LPHGSAARLAWRRGERPRGAVLA*TAWPPA
Trigger: CGCCGGAGGCCAGGCTGTTCACGCAAGAACCGCACC...ACGGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp CCTGGCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGAAGACGGTCGAGGCTGTaGAGCCCACGGAAGGCGCGC +
Preference number: 4 (lower is better)
Translates to: PGLPHGSAARLAWRRGERRRSRL*SPRKAR
Trigger: GCGCGCCTTCCGTGGGCTGCACAGCCTCGACCGTCT...TCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGCCAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp CCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCGTATGTGTGGGCCAGAGCCGTTaGCCGGCGGGCTGTCACCGG +
Preference number: 4 (lower is better)
Translates to: PTGRPPGWLGGVERDPVCVGQSR*PAGCHR
Trigger: CCGGTGACAGCCCGCCGGGCAACGGCTCTGGCCCAC...ACATACGGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp CCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCGTATGTGCCCTCGGGCCGCACTaGAGTGAGCGGGGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: PTGRPPGWLGGVERDPVCALGPH*SERGLS
Trigger: GCTGAGCCCCCGCTCACTGCAGTGCGGCCCGAGGGC...ACATACGGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp GGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGCCTGCCCTCGGGCCGCACTaGAGTGAGCGGGGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GDGGGGRQASIREDLAWPALGPH*SERGLS
Trigger: GCTGAGCCCCCGCTCACTGCAGTGCGGCCCGAGGGC...AGGCCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp GCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCGGAAGATGCGCTGGCTaGCAGCAGGGATGCCCACGG +
Preference number: 4 (lower is better)
Translates to: ACPTGRPPGWLGGVERDPGRCAG*QQGCPR
Trigger: CCGTGGGCATCCCTGCTGCCAGCCAGCGCATCTTCC...GGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp CCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCGGCATGCGGGTGCACATaGGCCACGCGGTTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: PAPRVGRPAGLAAWRETPACGCT*ATRFWC
Trigger: GCACCAGAACCGCGTGGCCCATGTGCACCCGCATGC...CGGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp TGGGGTGGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCGGCGAGGGCCCGAGGTaGGGAACCCTGGTGGCTCGG +
Preference number: 4 (lower is better)
Translates to: WGGDGGGGRQASIREDLAGEGPR*GTLVAR
Trigger: CCGAGCCACCAGGGTTCCCCACCTCGGGCCCTCGCC...GGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCCACCCCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp TGGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGCCCCCCCGCTGCCTGCCTaGCCCAGACGGCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: WRWGWRAAGVHQGGPGLAPPLPA*PRRQWL
Trigger: CAGCCACTGCCGTCTGGGCCAGGCAGGCAGCGGGGG...GGCCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCCA
74% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp TGGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGCCGCCGCCCGGCTGGCTTaGCGGCGTGGAGAGAGACCC +
Preference number: 4 (lower is better)
Translates to: WRWGWRAAGVHQGGPGLAAARLA*RRGERP
Trigger: GGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGC...GGCCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR TCA 90 bp CTGGCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACGCAGCCACAGGATGGTaGGGTTGCGGCAGGCACGGA +
Preference number: 4 (lower is better)
Translates to: LACPTGRPPGWLGGVERDAATGW*GCGRHG
Trigger: TCCGTGCCTGCCGCAACCTCACCATCCTGTGGCTGC...GTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGCCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR TCA 90 bp GGCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCGCAGGAAGAGGTGTGTaGGGTTGCCCAGGTCGCGGA +
Preference number: 4 (lower is better)
Translates to: GLPHGSAARLAWRRGERPAGRGV*GCPGRG
Trigger: TCCGCGACCTGGGCAACCTCACACACCTCTTCCTGC...GGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR TCA 90 bp CCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCGGCAGGAAGAGGTGTGTaGGGTTGCCCAGGTCGCGGA +
Preference number: 4 (lower is better)
Translates to: PAPRVGRPAGLAAWRETPAGRGV*GCPGRG
Trigger: TCCGCGACCTGGGCAACCTCACACACCTCTTCCTGC...CGGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR TCA 90 bp GCCTGGCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGCACACACCTGGCTGCTaGGCACGCTCTTGTGTCCGC +
Preference number: 4 (lower is better)
Translates to: AWPAPRVGRPAGLAAWREHTPGC*ARSCVR
Trigger: GCGGACACAAGAGCGTGCTCAGCAGCCAGGTGTGTG...CTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGCCAGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp CCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCGTATGTCCGCAGCGGTCCAGGTaGAGCGTGTGTAGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: PTGRPPGWLGGVERDPVCPQRSR*SVCRRP
Trigger: GGGCCGCCTACACACGCTGCACCTGGACCGCTGCGG...ACATACGGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp GAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGCCTGGGCGTTGCGGGAGGCTaGAGGGCACCTCGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: EMGVAGGRRPSGRTWPGLGVAGG*RAPRRR
Trigger: CCTCCTCCGAGGTGCCCTGCAGCCTCCCGCAACGCC...CAGGCCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp GGCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCGCCACAGCGCAGCCCTaGAGGTCATTGGCAGCTAGG +
Preference number: 4 (lower is better)
Translates to: GLPHGSAARLAWRRGERPATAQP*RSLAAR
Trigger: CCTAGCTGCCAATGACCTGCAGGGCTGCGCTGTGGC...GGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp GGCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCCTCATCGGTGGCCCTaGCGGTCCAGATGGGATGGT +
Preference number: 4 (lower is better)
Translates to: GLPHGSAARLAWRRGERPPHRWP*RSRWDG
Trigger: ACCATCCCATCTGGACCGGCAGGGCCACCGATGAGG...GGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp TGGGGTGGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCGCAGGCACCTGGGCATaGGGCTGCCACCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: WGGDGGGGRQASIREDLAAGTWA*GCHLPG
Trigger: GCCTGGCAGGTGGCAGCCCCATGCCCAGGTGCCTGC...GGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCCACCCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp CCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCGTGGGCCACGCGGTTCTaGTGCAGTAGGAGACGGTCG +
Preference number: 4 (lower is better)
Translates to: PAPRVGRPAGLAAWRETPWATRF*CSRRRS
Trigger: CGACCGTCTCCTACTGCACCAGAACCGCGTGGCCCA...CGGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR TCA 90 bp CTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCGTGGAGGGCCAGGCCAGTaGAGGCAGCCGCATCAATTC +
Preference number: 4 (lower is better)
Translates to: LPHGSAARLAWRRGERPRGGPGQ*RQPHQF
Trigger: GAATTGATGCGGCTGCCTTCACTGGCCTGGCCCTCC...ACGGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp TGGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGCCAGACGGTCGAGGCTGTaGAGCCCACGGAAGGCGCGC +
Preference number: 4 (lower is better)
Translates to: WRWGWRAAGVHQGGPGLARRSRL*SPRKAR
Trigger: GCGCGCCTTCCGTGGGCTGCACAGCCTCGACCGTCT...GGCCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp CCTGGCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGAAGGTCACGGAAGGCATaGGGGTGCACATGGGCCACG +
Preference number: 4 (lower is better)
Translates to: PGLPHGSAARLAWRRGERRSRKA*GCTWAT
Trigger: CGTGGCCCATGTGCACCCGCATGCCTTCCGTGACCT...TCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGCCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp TGGGGTGGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCGGCCCAGAGTGGGCGTaGCCGGCAGTCACACACCCA +
Preference number: 4 (lower is better)
Translates to: WGGDGGGGRQASIREDLAGPEWA*PAVTHP
Trigger: TGGGTGTGTGACTGCCGGGCACGCCCACTCTGGGCC...GGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCCACCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp GAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGCCTGCGCGCTCGGGCACGCTaGAGATGCGGTTGCCGTGCA +
Preference number: 4 (lower is better)
Translates to: EMGVAGGRRPSGRTWPGLRARAR*RCGCRA
Trigger: TGCACGGCAACCGCATCTCCAGCGTGCCCGAGCGCG...CAGGCCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp CCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCGGGGCCAGGGCCTCAGTaGGCAGCGCTGATAGATTGT +
Preference number: 4 (lower is better)
Translates to: PAPRVGRPAGLAAWRETPGPGPQ*AALIDC
Trigger: ACAATCTATCAGCGCTGCCCACTGAGGCCCTGGCCC...CGGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp GAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGCCTGCAGCCAGGCCCAGAGTaGGCGTGCCCGGCAGTCACA +
Preference number: 4 (lower is better)
Translates to: EMGVAGGRRPSGRTWPGLQPGPE*ACPAVT
Trigger: TGTGACTGCCGGGCACGCCCACTCTGGGCCTGGCTG...CAGGCCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp TGGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGCCCAGCCAGGCCCAGAGTaGGCGTGCCCGGCAGTCACA +
Preference number: 4 (lower is better)
Translates to: WRWGWRAAGVHQGGPGLAQPGPE*ACPAVT
Trigger: TGTGACTGCCGGGCACGCCCACTCTGGGCCTGGCTG...GGCCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp GGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGCCTCAGCCAGGCCCAGAGTaGGCGTGCCCGGCAGTCACA +
Preference number: 4 (lower is better)
Translates to: GDGGGGRQASIREDLAWPQPGPE*ACPAVT
Trigger: TGTGACTGCCGGGCACGCCCACTCTGGGCCTGGCTG...AGGCCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp GGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGCCTGCGGCTCCTCATCGGTaGCCCTGCCGGTCCAGATGG +
Preference number: 4 (lower is better)
Translates to: GDGGGGRQASIREDLAWPAAPHR*PCRSRW
Trigger: CCATCTGGACCGGCAGGGCCACCGATGAGGAGCCGC...AGGCCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp GAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGCCTGGCGGCTCCTCATCGGTaGCCCTGCCGGTCCAGATGG +
Preference number: 4 (lower is better)
Translates to: EMGVAGGRRPSGRTWPGLAAPHR*PCRSRW
Trigger: CCATCTGGACCGGCAGGGCCACCGATGAGGAGCCGC...CAGGCCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp CCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCGGCTGGCTTGGCGGCGTaGAGAGAGACCCCGTATGTA +
Preference number: 4 (lower is better)
Translates to: PAPRVGRPAGLAAWRETPAGLAA*RETPYV
Trigger: TACATACGGGGTCTCTCTCCACGCCGCCAAGCCAGC...CGGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp GGCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCGCTGGCTTGGCGGCGTaGAGAGAGACCCCGTATGTA +
Preference number: 4 (lower is better)
Translates to: GLPHGSAARLAWRRGERPAGLAA*RETPYV
Trigger: TACATACGGGGTCTCTCTCCACGCCGCCAAGCCAGC...GGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp CCTGGCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGATGGGAGGCGGCGTTCTaGAACAAACGCTGCCGCCGA +
Preference number: 4 (lower is better)
Translates to: PGLPHGSAARLAWRRGERWEAAF*NKRCRR
Trigger: TCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCA...TCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGCCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR TCA 90 bp TGGGGTGGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCGCAGCCACAGGATGGTaGGGTTGCGGCAGGCACGGA +
Preference number: 4 (lower is better)
Translates to: WGGDGGGGRQASIREDLAAATGW*GCGRHG
Trigger: TCCGTGCCTGCCGCAACCTCACCATCCTGTGGCTGC...GGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCCACCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR TCA 90 bp CCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCGGCTGTGCATTATCGCTaGGGTCCAGCTGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PAPRVGRPAGLAAWRETPAVHYR*GPAAPG
Trigger: TCCTGGAGCAGCTGGACCTCAGCGATAATGCACAGC...CGGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR TCA 90 bp GCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCTCCTCAGGACTCCAGTaGACACAGAGCCCGCATTGC +
Preference number: 4 (lower is better)
Translates to: ACPTGRPPGWLGGVERDPSSGLQ*TQSPHC
Trigger: GCAATGCGGGCTCTGTGTTCACTGGAGTCCTGAGGA...GGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425986.1
CDS-3UTR GCA 90 bp CCTGGCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGAGAGATGCGGTTGCCGTaGAGGAAGATGCGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PGLPHGSAARLAWRRGEREMRLP*RKMRWL
Trigger: CAGCCAGCGCATCTTCCTGCACGGCAACCGCATCTC...TCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp GGCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCGCCAGCACATTCGAGTaGAGCCACAGGATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GLPHGSAARLAWRRGERPASTFE*SHRMVR
Trigger: CCTCACCATCCTGTGGCTGCACTCGAATGTGCTGGC...GGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp ACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCGTATGTACACCGCAGCGGTCCAGGTaGAGCGTGTGTAGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: TGRPPGWLGGVERDPVCTPQRSR*SVCRRP
Trigger: GGGCCGCCTACACACGCTGCACCTGGACCGCTGCGG...TGTACATACGGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp CTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCGTGGTGTCATCAGGCAGTaGCTGCAGCGCGTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: LPHGSAARLAWRRGERPRGVIRQ*LQRVVL
Trigger: CAGGACAACGCGCTGCAGGCACTGCCTGATGACACC...ACGGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp CCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCGGAGATGCGGTTGCCGTaGAGGAAGAGGTGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: PAPRVGRPAGLAAWRETPEMRLP*RKRCVR
Trigger: CCTCACACACCTCTTCCTGCACGGCAACCGCATCTC...CGGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp TGGGGTGGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCCGGAAGGCATGCGGGTaGACATGGGCCACGCGGTTC +
Preference number: 4 (lower is better)
Translates to: WGGDGGGGRQASIREDLARKACG*TWATRF
Trigger: GAACCGCGTGGCCCATGTGCACCCGCATGCCTTCCG...GGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCCACCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp GCCTGGCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGCTTCAGCGCATTGCCTaGCGAAGCTGGTCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: AWPAPRVGRPAGLAAWRELQRIA*RSWSSR
Trigger: CCTGGAAGACCAGCTTCGGCAGGCAATGCGCTGAAG...CTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGCCAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp GGCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCGTCCCTTCAGCGCATTaGCTGCCGAAGCTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: GLPHGSAARLAWRRGERPVPSAH*LPKLVF
Trigger: GAAGACCAGCTTCGGCAGGCAATGCGCTGAAGGGAC...GGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp GAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGCCTGCCAGACGGCAGTGGCTaGGGGTGCGGTTCTTGCGTG +
Preference number: 4 (lower is better)
Translates to: EMGVAGGRRPSGRTWPGLPDGSG*GCGSCV
Trigger: CACGCAAGAACCGCACCCGCAGCCACTGCCGTCTGG...CAGGCCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp TGGGGTGGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCGCATACGCAGGCACCTaGGCATGGGGCTGCCACCTG +
Preference number: 4 (lower is better)
Translates to: WGGDGGGGRQASIREDLAAYAGT*AWGCHL
Trigger: CAGGTGGCAGCCCCATGCCCAGGTGCCTGCGTATGC...GGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCCACCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp GCCTGGCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACGGAAGCTGGCAGCTaGCACATGCGAGATGCGGTT +
Preference number: 4 (lower is better)
Translates to: AWPAPRVGRPAGLAAWRETEAGS*HMRDAV
Trigger: AACCGCATCTCGCATGTGCCAGCTGCCAGCTTCCGT...CTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGCCAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp TGGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGCCAGGCGGCCCAGGCCGTaGAATGTGGCAGGGTCCACA +
Preference number: 4 (lower is better)
Translates to: WRWGWRAAGVHQGGPGLARRPRP*NVAGST
Trigger: TGTGGACCCTGCCACATTCCACGGCCTGGGCCGCCT...GGCCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp GGTGGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGAGGCGGCCCAGGCCGTaGAATGTGGCAGGGTCCACA +
Preference number: 4 (lower is better)
Translates to: GGDGGGGRQASIREDLAWRRPRP*NVAGST
Trigger: TGTGGACCCTGCCACATTCCACGGCCTGGGCCGCCT...CCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCCACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp TGGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGCCGCATGCGGGTGCACATaGGCCACGCGGTTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: WRWGWRAAGVHQGGPGLAACGCT*ATRFWC
Trigger: GCACCAGAACCGCGTGGCCCATGTGCACCCGCATGC...GGCCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp GGTGGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGCCCTGCCGGTCCAGATaGGATGGTAAGGGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: GGDGGGGRQASIREDLAWPCRSR*DGKGRW
Trigger: CCACCGGCCCTTACCATCCCATCTGGACCGGCAGGG...CCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCCACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp TGGGGTGGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCCCCTGCCGGTCCAGATaGGATGGTAAGGGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: WGGDGGGGRQASIREDLAPCRSR*DGKGRW
Trigger: CCACCGGCCCTTACCATCCCATCTGGACCGGCAGGG...GGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCCACCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp GGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGCCTCCCTGCCGGTCCAGATaGGATGGTAAGGGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: GDGGGGRQASIREDLAWPPCRSR*DGKGRW
Trigger: CCACCGGCCCTTACCATCCCATCTGGACCGGCAGGG...AGGCCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp GCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCCTTGTCAGCGGCATCTaGCTGGCAGCACTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: ACPTGRPPGWLGGVERDPLVSGI*LAALGK
Trigger: CTTCCCAAGTGCTGCCAGCCAGATGCCGCTGACAAG...GGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp CCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCGCTTGTCAGCGGCATCTaGCTGGCAGCACTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: PAPRVGRPAGLAAWRETPLVSGI*LAALGK
Trigger: CTTCCCAAGTGCTGCCAGCCAGATGCCGCTGACAAG...CGGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp GGCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCTTGTCAGCGGCATCTaGCTGGCAGCACTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: GLPHGSAARLAWRRGERPLVSGI*LAALGK
Trigger: CTTCCCAAGTGCTGCCAGCCAGATGCCGCTGACAAG...GGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp CCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCGTATGTTGGCCCAGACGGCAGTaGCTGCGGGTGCGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: PTGRPPGWLGGVERDPVCWPRRQ*LRVRFL
Trigger: CAAGAACCGCACCCGCAGCCACTGCCGTCTGGGCCA...ACATACGGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp GGTGGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGTCAAAAACGGGCGCCTaGATGCCCGAGGGCGGGGGT +
Preference number: 4 (lower is better)
Translates to: GGDGGGGRQASIREDLAWSKTGA*MPEGGG
Trigger: ACCCCCGCCCTCGGGCATCCAGGCGCCCGTTTTTGA...CCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCCACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000425986.1
CDS-3UTR TCA 90 bp CTGGCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACGCTGTGCATTATCGCTaGGGTCCAGCTGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LACPTGRPPGWLGGVERDAVHYR*GPAAPG
Trigger: TCCTGGAGCAGCTGGACCTCAGCGATAATGCACAGC...GTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR TCA 90 bp GCCTGGCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACAGATAGAGTGTCATaGGGCGGCCAAGGTCACGGA +
Preference number: 4 (lower is better)
Translates to: AWPAPRVGRPAGLAAWRETDRVS*GGQGHG
Trigger: TCCGTGACCTTGGCCGCCTCATGACACTCTATCTGT...CTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGCCAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR TCA 90 bp CTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCGTCAAAGGGTGAGTCATTaGTGTGCCGTGGGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: LPHGSAARLAWRRGERPRQRVSH*CAVGQS
Trigger: GCTCTGGCCCACGGCACATCAATGACTCACCCTTTG...ACGGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR TCA 90 bp CCTGGCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACAAAGGGTGAGTCATTaGTGTGCCGTGGGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: PGLPHGSAARLAWRRGERQRVSH*CAVGQS
Trigger: GCTCTGGCCCACGGCACATCAATGACTCACCCTTTG...TCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGCCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR TCA 90 bp GCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCCAGAGTCCCAAAGGGTaGGTCATTGATGTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: ACPTGRPPGWLGGVERDPQSPKG*VIDVPW
Trigger: CCACGGCACATCAATGACTCACCCTTTGGGACTCTG...GGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR TCA 90 bp GGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGCCTCACACACCTGGCTGCTaGGCACGCTCTTGTGTCCGC +
Preference number: 4 (lower is better)
Translates to: GDGGGGRQASIREDLAWPHTPGC*ARSCVR
Trigger: GCGGACACAAGAGCGTGCTCAGCAGCCAGGTGTGTG...AGGCCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR TCA 90 bp GGCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCTGGAATGGACACTGGTaGCTGCAGGTACCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: GLPHGSAARLAWRRGERPWNGHW*LQVPPQ
Trigger: CTGAGGAGGTACCTGCAGTCACCAGTGTCCATTCCA...GGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425986.1
CDS-3UTR GCA 90 bp CCTGGCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACATGCGAGATGCGGTTaGCGTGCAGGAAGATGCGCT +
Preference number: 4 (lower is better)
Translates to: PGLPHGSAARLAWRRGERHARCG*RAGRCA
Trigger: AGCGCATCTTCCTGCACGGCAACCGCATCTCGCATG...TCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGCCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp CTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCGTCTGGCACATGCGAGATaGGGTTGCCGTGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: LPHGSAARLAWRRGERPRLAHAR*GCRAGR
Trigger: TCTTCCTGCACGGCAACCGCATCTCGCATGTGCCAG...ACGGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp CCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCGTATGTCTGGCAGCTGGCACATaGGAGATGCGGTTGCCGTGC +
Preference number: 4 (lower is better)
Translates to: PTGRPPGWLGGVERDPVCLAAGT*EMRLPC
Trigger: GCACGGCAACCGCATCTCGCATGTGCCAGCTGCCAG...ACATACGGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp GGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGCCTCTGGCAGCTGGCACATaGGAGATGCGGTTGCCGTGC +
Preference number: 4 (lower is better)
Translates to: GDGGGGRQASIREDLAWPLAAGT*EMRLPC
Trigger: GCACGGCAACCGCATCTCGCATGTGCCAGCTGCCAG...AGGCCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp CCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCGCACAGACCGGAGCTGTaGATTATCGCTGAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: PAPRVGRPAGLAAWRETPHRPEL*IIAEVQ
Trigger: CTGGACCTCAGCGATAATGCACAGCTCCGGTCTGTG...CGGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp GGTGGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGGCCACGCGGTTCTGGTaGAGTAGGAGACGGTCGAGG +
Preference number: 4 (lower is better)
Translates to: GGDGGGGRQASIREDLAWATRFW*SRRRSR
Trigger: CCTCGACCGTCTCCTACTGCACCAGAACCGCGTGGC...CCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCCACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp GGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGCCTGCCACAGCGCAGCCCTaGAGGTCATTGGCAGCTAGG +
Preference number: 4 (lower is better)
Translates to: GDGGGGRQASIREDLAWPATAQP*RSLAAR
Trigger: CCTAGCTGCCAATGACCTGCAGGGCTGCGCTGTGGC...AGGCCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp CCTGGCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACTTCAGCGCATTGCCTaGCGAAGCTGGTCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: PGLPHGSAARLAWRRGERLQRIA*RSWSSR
Trigger: CCTGGAAGACCAGCTTCGGCAGGCAATGCGCTGAAG...TCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGCCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp CTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCGTACGGAAGCTGGCAGCTaGCACATGCGAGATGCGGTT +
Preference number: 4 (lower is better)
Translates to: LPHGSAARLAWRRGERPRTEAGS*HMRDAV
Trigger: AACCGCATCTCGCATGTGCCAGCTGCCAGCTTCCGT...ACGGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp GGTGGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGGGCAGGCACGGAAGCTaGCAGCTGGCACATGCGAGA +
Preference number: 4 (lower is better)
Translates to: GGDGGGGRQASIREDLAWGRHGS*QLAHAR
Trigger: TCTCGCATGTGCCAGCTGCCAGCTTCCGTGCCTGCC...CCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCCACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp GAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGCCTGCCAGGCCGTGGAATGTaGCAGGGTCCACAGACCGGA +
Preference number: 4 (lower is better)
Translates to: EMGVAGGRRPSGRTWPGLPGRGM*QGPQTG
Trigger: TCCGGTCTGTGGACCCTGCCACATTCCACGGCCTGG...CAGGCCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp GGTGGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGTGGGCCACGCGGTTCTaGTGCAGTAGGAGACGGTCG +
Preference number: 4 (lower is better)
Translates to: GGDGGGGRQASIREDLAWWATRF*CSRRRS
Trigger: CGACCGTCTCCTACTGCACCAGAACCGCGTGGCCCA...CCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCCACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp GGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGCCTTCAGCGGCATCTGGCTaGCAGCACTTGGGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: GDGGGGRQASIREDLAWPSAASG*QHLGSP
Trigger: GGGGCTTCCCAAGTGCTGCCAGCCAGATGCCGCTGA...AGGCCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp CCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCGTATGTGTCATTGATGTGCCGTaGGCCAGAGCCGTTGCCCGG +
Preference number: 4 (lower is better)
Translates to: PTGRPPGWLGGVERDPVCVIDVP*ARAVAR
Trigger: CCGGGCAACGGCTCTGGCCCACGGCACATCAATGAC...ACATACGGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp GGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGCCTGTCATTGATGTGCCGTaGGCCAGAGCCGTTGCCCGG +
Preference number: 4 (lower is better)
Translates to: GDGGGGRQASIREDLAWPVIDVP*ARAVAR
Trigger: CCGGGCAACGGCTCTGGCCCACGGCACATCAATGAC...AGGCCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp GAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGCCTGTGGGAGGCGGCGTTCTaGAACAAACGCTGCCGCCGA +
Preference number: 4 (lower is better)
Translates to: EMGVAGGRRPSGRTWPGLWEAAF*NKRCRR
Trigger: TCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCA...CAGGCCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp CTGGCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCTATATACCGCGATCTaGGTGGGAGGCGGCGTTCTG +
Preference number: 4 (lower is better)
Translates to: LACPTGRPPGWLGGVERDLYTAI*VGGGVL
Trigger: CAGAACGCCGCCTCCCACCCAGATCGCGGTATATAG...GTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp CTGGCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCACAGACCGGAGCTGTaGATTATCGCTGAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: LACPTGRPPGWLGGVERDHRPEL*IIAEVQ
Trigger: CTGGACCTCAGCGATAATGCACAGCTCCGGTCTGTG...GTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp CTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCGTCACAGACCGGAGCTGTaGATTATCGCTGAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: LPHGSAARLAWRRGERPRHRPEL*IIAEVQ
Trigger: CTGGACCTCAGCGATAATGCACAGCTCCGGTCTGTG...ACGGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp GGTGGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGCGCTGGAGATGCGGTTaGCGTGCAGGAAGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: GGDGGGGRQASIREDLAWRWRCG*RAGRGV
Trigger: CACACCTCTTCCTGCACGGCAACCGCATCTCCAGCG...CCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp ACCGCGATCTGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGGCGTTGCGGGAGGCTaGAGGGCACCTCGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: TAIWVGGGVLEQTLPPNPGVAGG*RAPRRR
Trigger: CCTCCTCCGAGGTGCCCTGCAGCCTCCCGCAACGCC...AGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCAGATCGCGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp CTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCGTATTGCCTGCCGAAGCTaGTCTTCCAGGCTCCAGTAC +
Preference number: 4 (lower is better)
Translates to: LPHGSAARLAWRRGERPRIACRS*SSRLQY
Trigger: GTACTGGAGCCTGGAAGACCAGCTTCGGCAGGCAAT...ACGGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp GCGATCTGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAGGTGGGGAACCCTGGTaGCTCGGAGCCCTCGGGCCG +
Preference number: 4 (lower is better)
Translates to: AIWVGGGVLEQTLPPNPVGGEPW*LGALGP
Trigger: CGGCCCGAGGGCTCCGAGCCACCAGGGTTCCCCACC...TACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCAGATCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp AACGCTGCCGCCGAACCCTGTAAACATGATGGGGTGGAGATGGGGGTGGCGGGCGGTCGGCCGCCCGGCTaGCTTGGCGGCGTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: NAAAEPCKHDGVEMGVAGGRPPG*LGGVER
Trigger: TCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACC...GCCCGCCACCCCCATCTCCACCCCATCATGTTTACAGGGTTCGGCGGCAGCGTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp CCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCGTATGTATACCGCGATCTGGGTaGGAGGCGGCGTTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: PTGRPPGWLGGVERDPVCIPRSG*EAAFWN
Trigger: GTTCCAGAACGCCGCCTCCCACCCAGATCGCGGTAT...ACATACGGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp CTGGCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACGGGCTGGGGTCCCTCTaGGCACGTCTATCTCAAAAA +
Preference number: 4 (lower is better)
Translates to: LACPTGRPPGWLGGVERDGLGSL*ARLSQK
Trigger: TTTTTGAGATAGACGTGCCCAGAGGGACCCCAGCCC...GTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425986.1
CDS-3UTR GCA 90 bp TGGGGTGGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCCTGGCACATGCGAGATaGGGTTGCCGTGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: WGGDGGGGRQASIREDLALAHAR*GCRAGR
Trigger: TCTTCCTGCACGGCAACCGCATCTCGCATGTGCCAG...GGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCCACCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp GGTGGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGCTTCAGCGCATTGCCTaGCGAAGCTGGTCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: GGDGGGGRQASIREDLAWLQRIA*RSWSSR
Trigger: CCTGGAAGACCAGCTTCGGCAGGCAATGCGCTGAAG...CCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp GAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGCCTGGTCCCTTCAGCGCATTaGCTGCCGAAGCTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: EMGVAGGRRPSGRTWPGLVPSAH*LPKLVF
Trigger: GAAGACCAGCTTCGGCAGGCAATGCGCTGAAGGGAC...CAGGCCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp GGTGGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGGGTGAGTCATTGATGTaGCGTGGGCCAGAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: GGDGGGGRQASIREDLAWGESLM*RGPEPL
Trigger: CAACGGCTCTGGCCCACGGCACATCAATGACTCACC...CCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp GACCCCGTATGTACACACACCTGGCTGCTGAGCACGCTCTTGTGTCCGCTGGGGGCCCTCGGGCCGCACTaGAGTGAGCGGGGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: DPVCTHTWLLSTLLCPLGALGPH*SERGLS
Trigger: GCTGAGCCCCCGCTCACTGCAGTGCGGCCCGAGGGC...CCCCAGCGGACACAAGAGCGTGCTCAGCAGCCAGGTGTGTGTACATACGGGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp TGGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGCCACGGAAGCTGGCAGCTaGCACATGCGAGATGCGGTT +
Preference number: 4 (lower is better)
Translates to: WRWGWRAAGVHQGGPGLATEAGS*HMRDAV
Trigger: AACCGCATCTCGCATGTGCCAGCTGCCAGCTTCCGT...GGCCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp ACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCGTATGTACATCAGCGGCATCTGGCTaGCAGCACTTGGGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: TGRPPGWLGGVERDPVCTSAASG*QHLGSP
Trigger: GGGGCTTCCCAAGTGCTGCCAGCCAGATGCCGCTGA...TGTACATACGGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp GCGATCTGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTACGAGGTGGGGAACCCTaGTGGCTCGGAGCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: AIWVGGGVLEQTLPPNPVRGGEP*WLGALG
Trigger: CCCGAGGGCTCCGAGCCACCAGGGTTCCCCACCTCG...TACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCAGATCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp AACGCTGCCGCCGAACCCTGTAAACATGATGGGGTGGAGATGGGGGTGGCGGGCCGAGGTGGGGAACCCTaGTGGCTCGGAGCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: NAAAEPCKHDGVEMGVAGRGGEP*WLGALG
Trigger: CCCGAGGGCTCCGAGCCACCAGGGTTCCCCACCTCG...GCCCGCCACCCCCATCTCCACCCCATCATGTTTACAGGGTTCGGCGGCAGCGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp GACCCCGTATGTACACACACCTGGCTGCTGAGCACGCTCTTGTGTCCGCTGGGGAGGGAGGACCTGGCCTaGCCTGCCCCACGGGTCGGC +
Preference number: 4 (lower is better)
Translates to: DPVCTHTWLLSTLLCPLGREDLA*PAPRVG
Trigger: GCCGACCCGTGGGGCAGGCCAGGCCAGGTCCTCCCT...CCCCAGCGGACACAAGAGCGTGCTCAGCAGCCAGGTGTGTGTACATACGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp TGGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGCCCTATATACCGCGATCTaGGTGGGAGGCGGCGTTCTG +
Preference number: 4 (lower is better)
Translates to: WRWGWRAAGVHQGGPGLALYTAI*VGGGVL
Trigger: CAGAACGCCGCCTCCCACCCAGATCGCGGTATATAG...GGCCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp ACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCGTATGTACAGAGATGCGGTTGCCGTaGAGGAAGATGCGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: TGRPPGWLGGVERDPVCTEMRLP*RKMRWL
Trigger: CAGCCAGCGCATCTTCCTGCACGGCAACCGCATCTC...TGTACATACGGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp ACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCGTATGTACAGGTGTCATCAGGCAGTaGCTGCAGCGCGTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: TGRPPGWLGGVERDPVCTGVIRQ*LQRVVL
Trigger: CAGGACAACGCGCTGCAGGCACTGCCTGATGACACC...TGTACATACGGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp ACCGCGATCTGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGAGCCGCGGAACTTCTaGAGCCAGGCCCAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: TAIWVGGGVLEQTLPPNPEPRNF*SQAQSG
Trigger: CCCACTCTGGGCCTGGCTGCAGAAGTTCCGCGGCTC...AGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCAGATCGCGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp GGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGATGGGGTGGGCCACCCCCGCTGCCTaGCTGGCCCAGACGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GGVLEQTLPPNPVNMMGWATPAA*LAQTAV
Trigger: CACTGCCGTCTGGGCCAGGCAGGCAGCGGGGGTGGC...CCACCCCATCATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp ACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCGTATGTACAGGGCCAGGGCCTCAGTaGGCAGCGCTGATAGATTGT +
Preference number: 4 (lower is better)
Translates to: TGRPPGWLGGVERDPVCTGPGPQ*AALIDC
Trigger: ACAATCTATCAGCGCTGCCCACTGAGGCCCTGGCCC...TGTACATACGGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp GGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGATGGGGTGGGGTGGGGAACCCTGGTaGCTCGGAGCCCTCGGGCCG +
Preference number: 4 (lower is better)
Translates to: GGVLEQTLPPNPVNMMGWGGEPW*LGALGP
Trigger: CGGCCCGAGGGCTCCGAGCCACCAGGGTTCCCCACC...CCACCCCATCATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp TGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGGGCGAGGGCCCGAGGTaGGGAACCCTGGTGGCTCGG +
Preference number: 4 (lower is better)
Translates to: WVGGGVLEQTLPPNPVNMGEGPR*GTLVAR
Trigger: CCGAGCCACCAGGGTTCCCCACCTCGGGCCCTCGCC...CATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp ACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCGTATGTACAGCCAGCACATTCGAGTaGAGCCACAGGATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: TGRPPGWLGGVERDPVCTASTFE*SHRMVR
Trigger: CCTCACCATCCTGTGGCTGCACTCGAATGTGCTGGC...TGTACATACGGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp ACCGCGATCTGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTCGGGCACGCTGGAGATaGGGTTGCCGTGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: TAIWVGGGVLEQTLPPNPRARWR*GCRAGR
Trigger: TCTTCCTGCACGGCAACCGCATCTCCAGCGTGCCCG...AGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCAGATCGCGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp ACCGCGATCTGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTAGGTCACGGAAGGCATaGGGGTGCACATGGGCCACG +
Preference number: 4 (lower is better)
Translates to: TAIWVGGGVLEQTLPPNPRSRKA*GCTWAT
Trigger: CGTGGCCCATGTGCACCCGCATGCCTTCCGTGACCT...AGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCAGATCGCGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp CGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGATGGGGTGGAGGTGGGCCAGAGCCGTTaGCCGGCGGGCTGTCACCGG +
Preference number: 4 (lower is better)
Translates to: RRSGTNAAAEPCKHDGVEVGQSR*PAGCHR
Trigger: CCGGTGACAGCCCGCCGGGCAACGGCTCTGGCCCAC...CTCCACCCCATCATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp GGAGAGAGACCCCGTATGTACACACACCTGGCTGCTGAGCACGCTCTTGTGTCCGCCACCCCCGCTGCCTaGCTGGCCCAGACGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GERPRMYTHLAAEHALVSATPAA*LAQTAV
Trigger: CACTGCCGTCTGGGCCAGGCAGGCAGCGGGGGTGGC...GGACACAAGAGCGTGCTCAGCAGCCAGGTGTGTGTACATACGGGGTCTCTCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp CCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCGTATGTATGGACACTGGTGACTaGAGGTACCTCCTCAGGACT +
Preference number: 4 (lower is better)
Translates to: PTGRPPGWLGGVERDPVCMDTGD*RYLLRT
Trigger: AGTCCTGAGGAGGTACCTGCAGTCACCAGTGTCCAT...ACATACGGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425986.1
CDS-3UTR CCA 90 bp TGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGGCAGGCACCTGGGCATaGGGCTGCCACCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: WVGGGVLEQTLPPNPVNMAGTWA*GCHLPG
Trigger: GCCTGGCAGGTGGCAGCCCCATGCCCAGGTGCCTGC...CATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp AACGCTGCCGCCGAACCCTGTAAACATGATGGGGTGGAGATGGGGGTGGCGGGCGGAAGATGCGCTGGCTaGCAGCAGGGATGCCCACGG +
Preference number: 4 (lower is better)
Translates to: NAAAEPCKHDGVEMGVAGGRCAG*QQGCPR
Trigger: CCGTGGGCATCCCTGCTGCCAGCCAGCGCATCTTCC...GCCCGCCACCCCCATCTCCACCCCATCATGTTTACAGGGTTCGGCGGCAGCGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp GACCCCGTATGTACACACACCTGGCTGCTGAGCACGCTCTTGTGTCCGCTGGGGCGCGCTCGGGCACGCTaGAGATGCGGTTGCCGTGCA +
Preference number: 4 (lower is better)
Translates to: DPVCTHTWLLSTLLCPLGRARAR*RCGCRA
Trigger: TGCACGGCAACCGCATCTCCAGCGTGCCCGAGCGCG...CCCCAGCGGACACAAGAGCGTGCTCAGCAGCCAGGTGTGTGTACATACGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp GCGATCTGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAGATGGTAAGGGCCGGTaGCCACAGCGCAGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: AIWVGGGVLEQTLPPNPVDGKGR*PQRSPA
Trigger: TGCAGGGCTGCGCTGTGGCCACCGGCCCTTACCATC...TACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCAGATCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp GACCCCGTATGTACACACACCTGGCTGCTGAGCACGCTCTTGTGTCCGCTGGGGGCGGCTCCTCATCGGTaGCCCTGCCGGTCCAGATGG +
Preference number: 4 (lower is better)
Translates to: DPVCTHTWLLSTLLCPLGAAPHR*PCRSRW
Trigger: CCATCTGGACCGGCAGGGCCACCGATGAGGAGCCGC...CCCCAGCGGACACAAGAGCGTGCTCAGCAGCCAGGTGTGTGTACATACGGGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp AACGCTGCCGCCGAACCCTGTAAACATGATGGGGTGGAGATGGGGGTGGCGGGCTGGCCCAGACGGCAGTaGCTGCGGGTGCGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: NAAAEPCKHDGVEMGVAGWPRRQ*LRVRFL
Trigger: CAAGAACCGCACCCGCAGCCACTGCCGTCTGGGCCA...GCCCGCCACCCCCATCTCCACCCCATCATGTTTACAGGGTTCGGCGGCAGCGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR TCA 90 bp GCGATCTGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAGCAGGAAGAGGTGTGTaGGGTTGCCCAGGTCGCGGA +
Preference number: 4 (lower is better)
Translates to: AIWVGGGVLEQTLPPNPVAGRGV*GCPGRG
Trigger: TCCGCGACCTGGGCAACCTCACACACCTCTTCCTGC...TACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCAGATCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp CTGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGGCTGGCAGCAGGGATaGCCACGGGCACAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LGGRRRSGTNAAAEPCKHGWQQG*PRAQPA
Trigger: TGCAGGCTGTGCCCGTGGGCATCCCTGCTGCCAGCC...ATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp CGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGATGGGGTGGAGCCGCAGCGGTCCAGGTaGAGCGTGTGTAGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: RRSGTNAAAEPCKHDGVEPQRSR*SVCRRP
Trigger: GGGCCGCCTACACACGCTGCACCTGGACCGCTGCGG...CTCCACCCCATCATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp ACCGCGATCTGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGGTGTCATCAGGCAGTaGCTGCAGCGCGTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: TAIWVGGGVLEQTLPPNPGVIRQ*LQRVVL
Trigger: CAGGACAACGCGCTGCAGGCACTGCCTGATGACACC...AGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCAGATCGCGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp GCGATCTGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTACGGGCACGCTGGAGATaGGGTTGCCGTGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: AIWVGGGVLEQTLPPNPVRARWR*GCRAGR
Trigger: TCTTCCTGCACGGCAACCGCATCTCCAGCGTGCCCG...TACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCAGATCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp AACGCTGCCGCCGAACCCTGTAAACATGATGGGGTGGAGATGGGGGTGGCGGGCGCCACGCGGTTCTGGTaGAGTAGGAGACGGTCGAGG +
Preference number: 4 (lower is better)
Translates to: NAAAEPCKHDGVEMGVAGATRFW*SRRRSR
Trigger: CCTCGACCGTCTCCTACTGCACCAGAACCGCGTGGC...GCCCGCCACCCCCATCTCCACCCCATCATGTTTACAGGGTTCGGCGGCAGCGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp GCGATCTGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAGCCACGCGGTTCTGGTaGAGTAGGAGACGGTCGAGG +
Preference number: 4 (lower is better)
Translates to: AIWVGGGVLEQTLPPNPVATRFW*SRRRSR
Trigger: CCTCGACCGTCTCCTACTGCACCAGAACCGCGTGGC...TACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCAGATCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp CGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGATGGGGTGGAGGGCGTTGCGGGAGGCTaGAGGGCACCTCGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: RRSGTNAAAEPCKHDGVEGVAGG*RAPRRR
Trigger: CCTCCTCCGAGGTGCCCTGCAGCCTCCCGCAACGCC...CTCCACCCCATCATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp AACGCTGCCGCCGAACCCTGTAAACATGATGGGGTGGAGATGGGGGTGGCGGGCTGCGGGTGCGGTTCTTaGGTGAACAGCCTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: NAAAEPCKHDGVEMGVAGCGCGS*VNSLAS
Trigger: GGAGGCCAGGCTGTTCACGCAAGAACCGCACCCGCA...GCCCGCCACCCCCATCTCCACCCCATCATGTTTACAGGGTTCGGCGGCAGCGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp GACCCCGTATGTACACACACCTGGCTGCTGAGCACGCTCTTGTGTCCGCTGGGGGGAAGATGCGCTGGCTaGCAGCAGGGATGCCCACGG +
Preference number: 4 (lower is better)
Translates to: DPVCTHTWLLSTLLCPLGGRCAG*QQGCPR
Trigger: CCGTGGGCATCCCTGCTGCCAGCCAGCGCATCTTCC...CCCCAGCGGACACAAGAGCGTGCTCAGCAGCCAGGTGTGTGTACATACGGGGTC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp AACGCTGCCGCCGAACCCTGTAAACATGATGGGGTGGAGATGGGGGTGGCGGGCTGGGCCACGCGGTTCTaGTGCAGTAGGAGACGGTCG +
Preference number: 4 (lower is better)
Translates to: NAAAEPCKHDGVEMGVAGWATRF*CSRRRS
Trigger: CGACCGTCTCCTACTGCACCAGAACCGCGTGGCCCA...GCCCGCCACCCCCATCTCCACCCCATCATGTTTACAGGGTTCGGCGGCAGCGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp GACCCCGTATGTACACACACCTGGCTGCTGAGCACGCTCTTGTGTCCGCTGGGGGATGGTAAGGGCCGGTaGCCACAGCGCAGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: DPVCTHTWLLSTLLCPLGDGKGR*PQRSPA
Trigger: TGCAGGGCTGCGCTGTGGCCACCGGCCCTTACCATC...CCCCAGCGGACACAAGAGCGTGCTCAGCAGCCAGGTGTGTGTACATACGGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp CGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGATGGGGTGGAGCGAGGTGGGGAACCCTaGTGGCTCGGAGCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: RRSGTNAAAEPCKHDGVERGGEP*WLGALG
Trigger: CCCGAGGGCTCCGAGCCACCAGGGTTCCCCACCTCG...CTCCACCCCATCATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp GCGATCTGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTATGGGAGGCGGCGTTCTaGAACAAACGCTGCCGCCGA +
Preference number: 4 (lower is better)
Translates to: AIWVGGGVLEQTLPPNPVWEAAF*NKRCRR
Trigger: TCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCA...TACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCAGATCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp ACCGCGATCTGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTATACCGCGATCTGGGTaGGAGGCGGCGTTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: TAIWVGGGVLEQTLPPNPIPRSG*EAAFWN
Trigger: GTTCCAGAACGCCGCCTCCCACCCAGATCGCGGTAT...AGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCAGATCGCGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR TCA 90 bp GGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGATGGGGTGGTGGCAGCTAGGCGTTTaGGGTCACGGCCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: GGVLEQTLPPNPVNMMGWWQLGV*GHGQPG
Trigger: GCCTGGCTGGCCGTGACCTCAAACGCCTAGCTGCCA...CCACCCCATCATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR TCA 90 bp CTGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATTGGCAGCTAGGCGTTTaGGGTCACGGCCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LGGRRRSGTNAAAEPCKHWQLGV*GHGQPG
Trigger: GCCTGGCTGGCCGTGACCTCAAACGCCTAGCTGCCA...ATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp ACCGCGATCTGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTCATGCGAGATGCGGTTaGCGTGCAGGAAGATGCGCT +
Preference number: 4 (lower is better)
Translates to: TAIWVGGGVLEQTLPPNPHARCG*RAGRCA
Trigger: AGCGCATCTTCCTGCACGGCAACCGCATCTCGCATG...AGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCAGATCGCGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp CTGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATCGGAAGGCATGCGGGTaGACATGGGCCACGCGGTTC +
Preference number: 4 (lower is better)
Translates to: LGGRRRSGTNAAAEPCKHRKACG*TWATRF
Trigger: GAACCGCGTGGCCCATGTGCACCCGCATGCCTTCCG...ATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp TGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGCGGAAGGCATGCGGGTaGACATGGGCCACGCGGTTC +
Preference number: 4 (lower is better)
Translates to: WVGGGVLEQTLPPNPVNMRKACG*TWATRF
Trigger: GAACCGCGTGGCCCATGTGCACCCGCATGCCTTCCG...CATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp CTGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGAGCCGCGGAACTTCTaGAGCCAGGCCCAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: LGGRRRSGTNAAAEPCKHEPRNF*SQAQSG
Trigger: CCCACTCTGGGCCTGGCTGCAGAAGTTCCGCGGCTC...ATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp TGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGGAGCCGCGGAACTTCTaGAGCCAGGCCCAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: WVGGGVLEQTLPPNPVNMEPRNF*SQAQSG
Trigger: CCCACTCTGGGCCTGGCTGCAGAAGTTCCGCGGCTC...CATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp TGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGCCAGACGGCAGTGGCTaGGGGTGCGGTTCTTGCGTG +
Preference number: 4 (lower is better)
Translates to: WVGGGVLEQTLPPNPVNMPDGSG*GCGSCV
Trigger: CACGCAAGAACCGCACCCGCAGCCACTGCCGTCTGG...CATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp GACCCCGTATGTACACACACCTGGCTGCTGAGCACGCTCTTGTGTCCGCTGGGGGGCAGGCACGGAAGCTaGCAGCTGGCACATGCGAGA +
Preference number: 4 (lower is better)
Translates to: DPVCTHTWLLSTLLCPLGGRHGS*QLAHAR
Trigger: TCTCGCATGTGCCAGCTGCCAGCTTCCGTGCCTGCC...CCCCAGCGGACACAAGAGCGTGCTCAGCAGCCAGGTGTGTGTACATACGGGGTC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp TGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGTGGCCCAGACGGCAGTaGCTGCGGGTGCGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: WVGGGVLEQTLPPNPVNMWPRRQ*LRVRFL
Trigger: CAAGAACCGCACCCGCAGCCACTGCCGTCTGGGCCA...CATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp AACGCTGCCGCCGAACCCTGTAAACATGATGGGGTGGAGATGGGGGTGGCGGGCGCTGGCTTGGCGGCGTaGAGAGAGACCCCGTATGTA +
Preference number: 4 (lower is better)
Translates to: NAAAEPCKHDGVEMGVAGAGLAA*RETPYV
Trigger: TACATACGGGGTCTCTCTCCACGCCGCCAAGCCAGC...GCCCGCCACCCCCATCTCCACCCCATCATGTTTACAGGGTTCGGCGGCAGCGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp GACCCCGTATGTACACACACCTGGCTGCTGAGCACGCTCTTGTGTCCGCTGGGGACACTGCAATGGGGCTaGGGTCCCTCTGGGCACGTC +
Preference number: 4 (lower is better)
Translates to: DPVCTHTWLLSTLLCPLGTLQWG*GPSGHV
Trigger: GACGTGCCCAGAGGGACCCCAGCCCCATTGCAGTGT...CCCCAGCGGACACAAGAGCGTGCTCAGCAGCCAGGTGTGTGTACATACGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425986.1
CDS-3UTR TCA 90 bp GGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGATGGGGTGGGGAGGGCCAGGCCAGTaGAGGCAGCCGCATCAATTC +
Preference number: 4 (lower is better)
Translates to: GGVLEQTLPPNPVNMMGWGGPGQ*RQPHQF
Trigger: GAATTGATGCGGCTGCCTTCACTGGCCTGGCCCTCC...CCACCCCATCATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR TCA 90 bp CTGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATCACACACCTGGCTGCTaGGCACGCTCTTGTGTCCGC +
Preference number: 4 (lower is better)
Translates to: LGGRRRSGTNAAAEPCKHHTPGC*ARSCVR
Trigger: GCGGACACAAGAGCGTGCTCAGCAGCCAGGTGTGTG...ATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR TCA 90 bp GGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGATGGGGTGGCAGCAGCCGGCTCCTTaGAGGCCTCCTGGAATGGAC +
Preference number: 4 (lower is better)
Translates to: GGVLEQTLPPNPVNMMGWQQPAP*RPPGMD
Trigger: GTCCATTCCAGGAGGCCTTCAAGGAGCCGGCTGCTG...CCACCCCATCATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425986.1
CDS-3UTR GCA 90 bp GGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGATGGGGTGGCTGGCAGCTGGCACATaGGAGATGCGGTTGCCGTGC +
Preference number: 4 (lower is better)
Translates to: GGVLEQTLPPNPVNMMGWLAAGT*EMRLPC
Trigger: GCACGGCAACCGCATCTCGCATGTGCCAGCTGCCAG...CCACCCCATCATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp CTGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATCCTCATCGGTGGCCCTaGCGGTCCAGATGGGATGGT +
Preference number: 4 (lower is better)
Translates to: LGGRRRSGTNAAAEPCKHPHRWP*RSRWDG
Trigger: ACCATCCCATCTGGACCGGCAGGGCCACCGATGAGG...ATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp GCGATCTGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAGTCCCTTCAGCGCATTaGCTGCCGAAGCTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: AIWVGGGVLEQTLPPNPVVPSAH*LPKLVF
Trigger: GAAGACCAGCTTCGGCAGGCAATGCGCTGAAGGGAC...TACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCAGATCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp TGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGTGCGGGTGCGGTTCTTaGGTGAACAGCCTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: WVGGGVLEQTLPPNPVNMCGCGS*VNSLAS
Trigger: GGAGGCCAGGCTGTTCACGCAAGAACCGCACCCGCA...CATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp CTGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATTGCGGGTGCGGTTCTTaGGTGAACAGCCTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LGGRRRSGTNAAAEPCKHCGCGS*VNSLAS
Trigger: GGAGGCCAGGCTGTTCACGCAAGAACCGCACCCGCA...ATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp CGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGATGGGGTGGAGGCATACGCAGGCACCTaGGCATGGGGCTGCCACCTG +
Preference number: 4 (lower is better)
Translates to: RRSGTNAAAEPCKHDGVEAYAGT*AWGCHL
Trigger: CAGGTGGCAGCCCCATGCCCAGGTGCCTGCGTATGC...CTCCACCCCATCATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp GGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGATGGGGTGGGGCAGGCACGGAAGCTaGCAGCTGGCACATGCGAGA +
Preference number: 4 (lower is better)
Translates to: GGVLEQTLPPNPVNMMGWGRHGS*QLAHAR
Trigger: TCTCGCATGTGCCAGCTGCCAGCTTCCGTGCCTGCC...CCACCCCATCATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp TGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGCCAGGCCGTGGAATGTaGCAGGGTCCACAGACCGGA +
Preference number: 4 (lower is better)
Translates to: WVGGGVLEQTLPPNPVNMPGRGM*QGPQTG
Trigger: TCCGGTCTGTGGACCCTGCCACATTCCACGGCCTGG...CATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp CTGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATCCAGGCCGTGGAATGTaGCAGGGTCCACAGACCGGA +
Preference number: 4 (lower is better)
Translates to: LGGRRRSGTNAAAEPCKHPGRGM*QGPQTG
Trigger: TCCGGTCTGTGGACCCTGCCACATTCCACGGCCTGG...ATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp CGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGATGGGGTGGAGAGGCGGCCCAGGCCGTaGAATGTGGCAGGGTCCACA +
Preference number: 4 (lower is better)
Translates to: RRSGTNAAAEPCKHDGVERRPRP*NVAGST
Trigger: TGTGGACCCTGCCACATTCCACGGCCTGGGCCGCCT...CTCCACCCCATCATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp TGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGGAGATGCGGTTGCCGTaGAGGAAGATGCGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: WVGGGVLEQTLPPNPVNMEMRLP*RKMRWL
Trigger: CAGCCAGCGCATCTTCCTGCACGGCAACCGCATCTC...CATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp GACCCCGTATGTACACACACCTGGCTGCTGAGCACGCTCTTGTGTCCGCTGGGGCATGCGAGATGCGGTTaGCGTGCAGGAAGATGCGCT +
Preference number: 4 (lower is better)
Translates to: DPVCTHTWLLSTLLCPLGHARCG*RAGRCA
Trigger: AGCGCATCTTCCTGCACGGCAACCGCATCTCGCATG...CCCCAGCGGACACAAGAGCGTGCTCAGCAGCCAGGTGTGTGTACATACGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp GACCCCGTATGTACACACACCTGGCTGCTGAGCACGCTCTTGTGTCCGCTGGGGCTGGCACATGCGAGATaGGGTTGCCGTGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: DPVCTHTWLLSTLLCPLGLAHAR*GCRAGR
Trigger: TCTTCCTGCACGGCAACCGCATCTCGCATGTGCCAG...CCCCAGCGGACACAAGAGCGTGCTCAGCAGCCAGGTGTGTGTACATACGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp CGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGATGGGGTGGAGCGGGCACGCTGGAGATaGGGTTGCCGTGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: RRSGTNAAAEPCKHDGVERARWR*GCRAGR
Trigger: TCTTCCTGCACGGCAACCGCATCTCCAGCGTGCCCG...CTCCACCCCATCATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp CGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGATGGGGTGGAGAGGTCACGGAAGGCATaGGGGTGCACATGGGCCACG +
Preference number: 4 (lower is better)
Translates to: RRSGTNAAAEPCKHDGVERSRKA*GCTWAT
Trigger: CGTGGCCCATGTGCACCCGCATGCCTTCCGTGACCT...CTCCACCCCATCATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp CCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCGTATGTGCGCTGATAGATTGTTaGCAAACAGATAGAGTGTCA +
Preference number: 4 (lower is better)
Translates to: PTGRPPGWLGGVERDPVCALIDC*QTDRVS
Trigger: TGACACTCTATCTGTTTGCCAACAATCTATCAGCGC...ACATACGGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp TGGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGCCGCGCTGATAGATTGTTaGCAAACAGATAGAGTGTCA +
Preference number: 4 (lower is better)
Translates to: WRWGWRAAGVHQGGPGLAALIDC*QTDRVS
Trigger: TGACACTCTATCTGTTTGCCAACAATCTATCAGCGC...GGCCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp GGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGATGGGGTGGGGGCCAGGGCCTCAGTaGGCAGCGCTGATAGATTGT +
Preference number: 4 (lower is better)
Translates to: GGVLEQTLPPNPVNMMGWGPGPQ*AALIDC
Trigger: ACAATCTATCAGCGCTGCCCACTGAGGCCCTGGCCC...CCACCCCATCATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp CGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGATGGGGTGGAGTCAGCGGCATCTGGCTaGCAGCACTTGGGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: RRSGTNAAAEPCKHDGVESAASG*QHLGSP
Trigger: GGGGCTTCCCAAGTGCTGCCAGCCAGATGCCGCTGA...CTCCACCCCATCATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp GGAGAGAGACCCCGTATGTACACACACCTGGCTGCTGAGCACGCTCTTGTGTCCGTCATTGATGTGCCGTaGGCCAGAGCCGTTGCCCGG +
Preference number: 4 (lower is better)
Translates to: GERPRMYTHLAAEHALVSVIDVP*ARAVAR
Trigger: CCGGGCAACGGCTCTGGCCCACGGCACATCAATGAC...GGACACAAGAGCGTGCTCAGCAGCCAGGTGTGTGTACATACGGGGTCTCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR TCA 90 bp GACCCCGTATGTACACACACCTGGCTGCTGAGCACGCTCTTGTGTCCGCTGGGGACAGATAGAGTGTCATaGGGCGGCCAAGGTCACGGA +
Preference number: 4 (lower is better)
Translates to: DPVCTHTWLLSTLLCPLGTDRVS*GGQGHG
Trigger: TCCGTGACCTTGGCCGCCTCATGACACTCTATCTGT...CCCCAGCGGACACAAGAGCGTGCTCAGCAGCCAGGTGTGTGTACATACGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR TCA 90 bp GGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGATGGGGTGGCAAAGGGTGAGTCATTaGTGTGCCGTGGGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: GGVLEQTLPPNPVNMMGWQRVSH*CAVGQS
Trigger: GCTCTGGCCCACGGCACATCAATGACTCACCCTTTG...CCACCCCATCATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp TGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGGAGATGCGGTTGCCGTaGAGGAAGAGGTGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: WVGGGVLEQTLPPNPVNMEMRLP*RKRCVR
Trigger: CCTCACACACCTCTTCCTGCACGGCAACCGCATCTC...CATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp CGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGATGGGGTGGAGCGCTGGAGATGCGGTTaGCGTGCAGGAAGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: RRSGTNAAAEPCKHDGVERWRCG*RAGRGV
Trigger: CACACCTCTTCCTGCACGGCAACCGCATCTCCAGCG...CTCCACCCCATCATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp ACCGCGATCTGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTAGCTTGTCGTCACCTTaGGCTCATTGTAGCATACGC +
Preference number: 4 (lower is better)
Translates to: TAIWVGGGVLEQTLPPNPSLSSP*AHCSIR
Trigger: GCGTATGCTACAATGAGCCCAAGGTGACGACAAGCT...AGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCAGATCGCGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp GACCCCGTATGTACACACACCTGGCTGCTGAGCACGCTCTTGTGTCCGCTGGGGATTGCCTGCCGAAGCTaGTCTTCCAGGCTCCAGTAC +
Preference number: 4 (lower is better)
Translates to: DPVCTHTWLLSTLLCPLGIACRS*SSRLQY
Trigger: GTACTGGAGCCTGGAAGACCAGCTTCGGCAGGCAAT...CCCCAGCGGACACAAGAGCGTGCTCAGCAGCCAGGTGTGTGTACATACGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp CGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGATGGGGTGGAGATACCGCGATCTGGGTaGGAGGCGGCGTTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: RRSGTNAAAEPCKHDGVEIPRSG*EAAFWN
Trigger: GTTCCAGAACGCCGCCTCCCACCCAGATCGCGGTAT...CTCCACCCCATCATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR TCA 90 bp CGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGATGGGGTGGAGGCTGTGCATTATCGCTaGGGTCCAGCTGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RRSGTNAAAEPCKHDGVEAVHYR*GPAAPG
Trigger: TCCTGGAGCAGCTGGACCTCAGCGATAATGCACAGC...CTCCACCCCATCATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR TCA 90 bp TGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGCAGAGTCCCAAAGGGTaGGTCATTGATGTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: WVGGGVLEQTLPPNPVNMQSPKG*VIDVPW
Trigger: CCACGGCACATCAATGACTCACCCTTTGGGACTCTG...CATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp GGAGAGAGACCCCGTATGTACACACACCTGGCTGCTGAGCACGCTCTTGTGTCCGCCAGCACATTCGAGTaGAGCCACAGGATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GERPRMYTHLAAEHALVSASTFE*SHRMVR
Trigger: CCTCACCATCCTGTGGCTGCACTCGAATGTGCTGGC...GGACACAAGAGCGTGCTCAGCAGCCAGGTGTGTGTACATACGGGGTCTCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp GGAGAGAGACCCCGTATGTACACACACCTGGCTGCTGAGCACGCTCTTGTGTCCGGTGAGTCATTGATGTaGCGTGGGCCAGAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: GERPRMYTHLAAEHALVSGESLM*RGPEPL
Trigger: CAACGGCTCTGGCCCACGGCACATCAATGACTCACC...GGACACAAGAGCGTGCTCAGCAGCCAGGTGTGTGTACATACGGGGTCTCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp ATAAAATGCATATCTCTATATACCGCGATCTGGGTGGGAGGCGGCGTTCTGGAAGCCACCCCCGCTGCCTaGCTGGCCCAGACGGCAGTG +
Preference number: 4 (lower is better)
Translates to: IKCISLYTAIWVGGGVLEATPAA*LAQTAV
Trigger: CACTGCCGTCTGGGCCAGGCAGGCAGCGGGGGTGGC...TTCCAGAACGCCGCCTCCCACCCAGATCGCGGTATATAGAGATATGCATTTTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp AATAAAATGCATATCTCTATATACCGCGATCTGGGTGGGAGGCGGCGTTCTGGAGGCGAGGGCCCGAGGTaGGGAACCCTGGTGGCTCGG +
Preference number: 4 (lower is better)
Translates to: NKMHISIYRDLGGRRRSGGEGPR*GTLVAR
Trigger: CCGAGCCACCAGGGTTCCCCACCTCGGGCCCTCGCC...TCCAGAACGCCGCCTCCCACCCAGATCGCGGTATATAGAGATATGCATTTTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp AATAAAATGCATATCTCTATATACCGCGATCTGGGTGGGAGGCGGCGTTCTGGAGCCGCCCGGCTGGCTTaGCGGCGTGGAGAGAGACCC +
Preference number: 4 (lower is better)
Translates to: NKMHISIYRDLGGRRRSGAARLA*RRGERP
Trigger: GGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGC...TCCAGAACGCCGCCTCCCACCCAGATCGCGGTATATAGAGATATGCATTTTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR TCA 90 bp CGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGATGGGGTGGAGCAGAGTCCCAAAGGGTaGGTCATTGATGTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: RRSGTNAAAEPCKHDGVEQSPKG*VIDVPW
Trigger: CCACGGCACATCAATGACTCACCCTTTGGGACTCTG...CTCCACCCCATCATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp AATAAAATGCATATCTCTATATACCGCGATCTGGGTGGGAGGCGGCGTTCTGGAGCCCGAGGGCGGGGGTaGAGGGCAAGTGTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: NKMHISIYRDLGGRRRSGARGRG*RASVSR
Trigger: CCTGGACACACTTGCCCTCCACCCCCGCCCTCGGGC...TCCAGAACGCCGCCTCCCACCCAGATCGCGGTATATAGAGATATGCATTTTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425986.1
CDS-3UTR CCA 90 bp GGAGAGAGACCCCGTATGTACACACACCTGGCTGCTGAGCACGCTCTTGTGTCCAGCTTGTCGTCACCTTaGGCTCATTGTAGCATACGC +
Preference number: 4 (lower is better)
Translates to: GERPRMYTHLAAEHALVSSLSSP*AHCSIR
Trigger: GCGTATGCTACAATGAGCCCAAGGTGACGACAAGCT...GGACACAAGAGCGTGCTCAGCAGCCAGGTGTGTGTACATACGGGGTCTCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp ATAAAATGCATATCTCTATATACCGCGATCTGGGTGGGAGGCGGCGTTCTGGAAGCATGCGGGTGCACATaGGCCACGCGGTTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: IKCISLYTAIWVGGGVLEACGCT*ATRFWC
Trigger: GCACCAGAACCGCGTGGCCCATGTGCACCCGCATGC...TTCCAGAACGCCGCCTCCCACCCAGATCGCGGTATATAGAGATATGCATTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp GCGATCTGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAGCGCTGATAGATTGTTaGCAAACAGATAGAGTGTCA +
Preference number: 4 (lower is better)
Translates to: AIWVGGGVLEQTLPPNPVALIDC*QTDRVS
Trigger: TGACACTCTATCTGTTTGCCAACAATCTATCAGCGC...TACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCAGATCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp AATAAAATGCATATCTCTATATACCGCGATCTGGGTGGGAGGCGGCGTTCTGGAGATGGTAAGGGCCGGTaGCCACAGCGCAGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: NKMHISIYRDLGGRRRSGDGKGR*PQRSPA
Trigger: TGCAGGGCTGCGCTGTGGCCACCGGCCCTTACCATC...TCCAGAACGCCGCCTCCCACCCAGATCGCGGTATATAGAGATATGCATTTTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp ATAAAATGCATATCTCTATATACCGCGATCTGGGTGGGAGGCGGCGTTCTGGAAGCCACAGCGCAGCCCTaGAGGTCATTGGCAGCTAGG +
Preference number: 4 (lower is better)
Translates to: IKCISLYTAIWVGGGVLEATAQP*RSLAAR
Trigger: CCTAGCTGCCAATGACCTGCAGGGCTGCGCTGTGGC...TTCCAGAACGCCGCCTCCCACCCAGATCGCGGTATATAGAGATATGCATTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp AATAAAATGCATATCTCTATATACCGCGATCTGGGTGGGAGGCGGCGTTCTGGACCTCATCGGTGGCCCTaGCGGTCCAGATGGGATGGT +
Preference number: 4 (lower is better)
Translates to: NKMHISIYRDLGGRRRSGPHRWP*RSRWDG
Trigger: ACCATCCCATCTGGACCGGCAGGGCCACCGATGAGG...TCCAGAACGCCGCCTCCCACCCAGATCGCGGTATATAGAGATATGCATTTTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp ATAAAATGCATATCTCTATATACCGCGATCTGGGTGGGAGGCGGCGTTCTGGAACGCTGGAGATGCGGTTaGCGTGCAGGAAGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: IKCISLYTAIWVGGGVLERWRCG*RAGRGV
Trigger: CACACCTCTTCCTGCACGGCAACCGCATCTCCAGCG...TTCCAGAACGCCGCCTCCCACCCAGATCGCGGTATATAGAGATATGCATTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp AATAAAATGCATATCTCTATATACCGCGATCTGGGTGGGAGGCGGCGTTCTGGAGAGATGCGGTTGCCGTaGAGGAAGAGGTGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: NKMHISIYRDLGGRRRSGEMRLP*RKRCVR
Trigger: CCTCACACACCTCTTCCTGCACGGCAACCGCATCTC...TCCAGAACGCCGCCTCCCACCCAGATCGCGGTATATAGAGATATGCATTTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR GCA 90 bp ATAAAATGCATATCTCTATATACCGCGATCTGGGTGGGAGGCGGCGTTCTGGAAGGTGAGTCATTGATGTaGCGTGGGCCAGAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: IKCISLYTAIWVGGGVLEGESLM*RGPEPL
Trigger: CAACGGCTCTGGCCCACGGCACATCAATGACTCACC...TTCCAGAACGCCGCCTCCCACCCAGATCGCGGTATATAGAGATATGCATTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp AATAAAATGCATATCTCTATATACCGCGATCTGGGTGGGAGGCGGCGTTCTGGACTATATACCGCGATCTaGGTGGGAGGCGGCGTTCTG +
Preference number: 4 (lower is better)
Translates to: NKMHISIYRDLGGRRRSGLYTAI*VGGGVL
Trigger: CAGAACGCCGCCTCCCACCCAGATCGCGGTATATAG...TCCAGAACGCCGCCTCCCACCCAGATCGCGGTATATAGAGATATGCATTTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR TCA 90 bp AATAAAATGCATATCTCTATATACCGCGATCTGGGTGGGAGGCGGCGTTCTGGAACAGATAGAGTGTCATaGGGCGGCCAAGGTCACGGA +
Preference number: 4 (lower is better)
Translates to: NKMHISIYRDLGGRRRSGTDRVS*GGQGHG
Trigger: TCCGTGACCTTGGCCGCCTCATGACACTCTATCTGT...TCCAGAACGCCGCCTCCCACCCAGATCGCGGTATATAGAGATATGCATTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CCA 90 bp AATAAAATGCATATCTCTATATACCGCGATCTGGGTGGGAGGCGGCGTTCTGGAATTGCCTGCCGAAGCTaGTCTTCCAGGCTCCAGTAC +
Preference number: 4 (lower is better)
Translates to: NKMHISIYRDLGGRRRSGIACRS*SSRLQY
Trigger: GTACTGGAGCCTGGAAGACCAGCTTCGGCAGGCAAT...TCCAGAACGCCGCCTCCCACCCAGATCGCGGTATATAGAGATATGCATTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS GCA 90 bp CGCCACCCCCGCTGCCTGCCTGGCCCAGACGGCAGTGGCTGCGGGTaGGGTTCTTGCGTGAACAGCCTGGCCTCCGGCGAGGGCCCGAGG +
Preference number: 5 (lower is better)
Translates to: RHPRCLPGPDGSGCG*GSCVNSLASGEGPR
Trigger: CCTCGGGCCCTCGCCGGAGGCCAGGCTGTTCACGCAAGAACCGCACCCGCAGCCACTGCCGTCTGGGCCAGGCAGGCAGCGGGGGTGGCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CAA 90 bp TGGGGTGGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCCGTGGGCCAGAGCCGTaGCCCGGCGGGCTGTCACCG +
Preference number: 5 (lower is better)
Translates to: WGGDGGGGRQASIREDLARGPEP*PGGLSP
Trigger: CGGTGACAGCCCGCCGGGCAACGGCTCTGGCCCACG...GGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCCACCCCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CAA 90 bp GAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGCCTGCGTGGGCCAGAGCCGTaGCCCGGCGGGCTGTCACCG +
Preference number: 5 (lower is better)
Translates to: EMGVAGGRRPSGRTWPGLRGPEP*PGGLSP
Trigger: CGGTGACAGCCCGCCGGGCAACGGCTCTGGCCCACG...CAGGCCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CAA 90 bp TGGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGCCGGCCGCCCGGCTGGCTaGGCGGCGTGGAGAGAGACC +
Preference number: 5 (lower is better)
Translates to: WRWGWRAAGVHQGGPGLAGRPAG*AAWRET
Trigger: GGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCC...GGCCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS GCA 90 bp CAGTCCCGCCACCCCCGCTGCCTGCCTGGCCCAGACGGCAGTGGCTaGGGGTGCGGTTCTTGCGTGAACAGCCTGGCCTCCGGCGAGGGC +
Preference number: 5 (lower is better)
Translates to: QSRHPRCLPGPDGSG*GCGSCVNSLASGEG
Trigger: GCCCTCGCCGGAGGCCAGGCTGTTCACGCAAGAACCGCACCCGCAGCCACTGCCGTCTGGGCCAGGCAGGCAGCGGGGGTGGCGGGACTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CAA 90 bp GCCTGGCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGTTGGCAGCTAGGCGTTaGAGGTCACGGCCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: AWPAPRVGRPAGLAAWRELAARR*RSRPAR
Trigger: CCTGGCTGGCCGTGACCTCAAACGCCTAGCTGCCAA...CTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGCCAGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CAA 90 bp CTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCGTCTGCGGGTGCGGTTCTaGCGTGAACAGCCTGGCCTC +
Preference number: 5 (lower is better)
Translates to: LPHGSAARLAWRRGERPRLRVRF*REQPGL
Trigger: GAGGCCAGGCTGTTCACGCAAGAACCGCACCCGCAG...ACGGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS GCA 90 bp GCCCGAGGTGGGGAACCCTGGTGGCTCGGAGCCCTCGGGCCGCACTaGAGTGAGCGGGGGCTCAGCAGAGCCAGGCAGAGTCCCAAAGGG +
Preference number: 5 (lower is better)
Translates to: ARGGEPWWLGALGPH*SERGLSRARQSPKG
Trigger: CCCTTTGGGACTCTGCCTGGCTCTGCTGAGCCCCCGCTCACTGCAGTGCGGCCCGAGGGCTCCGAGCCACCAGGGTTCCCCACCTCGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS CCA 90 bp TCACCAGTCCCGCCACCCCCGCTGCCTGCCTGGCCCAGACGGCAGTaGCTGCGGGTGCGGTTCTTGCGTGAACAGCCTGGCCTCCGGCGA +
Preference number: 5 (lower is better)
Translates to: SPVPPPPLPAWPRRQ*LRVRFLREQPGLRR
Trigger: TCGCCGGAGGCCAGGCTGTTCACGCAAGAACCGCACCCGCAGCCACTGCCGTCTGGGCCAGGCAGGCAGCGGGGGTGGCGGGACTGGTGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CAA 90 bp GCCTGGCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACGCTGGAGATGCGGTaGCCGTGCAGGAAGAGGTGT +
Preference number: 5 (lower is better)
Translates to: AWPAPRVGRPAGLAAWRETLEMR*PCRKRC
Trigger: ACACCTCTTCCTGCACGGCAACCGCATCTCCAGCGT...CTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGCCAGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CAA 90 bp GCCTGGCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGCAGCCCTGCAGGTCATaGGCAGCTAGGCGTTTGAGG +
Preference number: 5 (lower is better)
Translates to: AWPAPRVGRPAGLAAWREQPCRS*AARRLR
Trigger: CCTCAAACGCCTAGCTGCCAATGACCTGCAGGGCTG...CTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGCCAGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CAA 90 bp GCCTGGCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGTCACACACCCAGGGGTaGTCGTTGAGCCTCAGGTAC +
Preference number: 5 (lower is better)
Translates to: AWPAPRVGRPAGLAAWRESHTQG*SLSLRY
Trigger: GTACCTGAGGCTCAACGACAACCCCTGGGTGTGTGA...CTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGCCAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CAA 90 bp CTGGCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCAGCCCTGCAGGTCATaGGCAGCTAGGCGTTTGAGG +
Preference number: 5 (lower is better)
Translates to: LACPTGRPPGWLGGVERDQPCRS*AARRLR
Trigger: CCTCAAACGCCTAGCTGCCAATGACCTGCAGGGCTG...GTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CAA 90 bp CTGGCCTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCGTCCCTTCAGCGCATaGCCTGCCGAAGCTGGTCTT +
Preference number: 5 (lower is better)
Translates to: LACPTGRPPGWLGGVERDRPFSA*PAEAGL
Trigger: AAGACCAGCTTCGGCAGGCAATGCGCTGAAGGGACG...GTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAGGCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CAA 90 bp CTGCCCCACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCGTCGTCCCTTCAGCGCATaGCCTGCCGAAGCTGGTCTT +
Preference number: 5 (lower is better)
Translates to: LPHGSAARLAWRRGERPRRPFSA*PAEAGL
Trigger: AAGACCAGCTTCGGCAGGCAATGCGCTGAAGGGACG...ACGGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGTGGGGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CAA 90 bp ACCGCGATCTGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTCGTGGGCCAGAGCCGTaGCCCGGCGGGCTGTCACCG +
Preference number: 5 (lower is better)
Translates to: TAIWVGGGVLEQTLPPNPRGPEP*PGGLSP
Trigger: CGGTGACAGCCCGCCGGGCAACGGCTCTGGCCCACG...AGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCAGATCGCGGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CAA 90 bp TGGGGTGGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCCTGCGGGTGCGGTTCTaGCGTGAACAGCCTGGCCTC +
Preference number: 5 (lower is better)
Translates to: WGGDGGGGRQASIREDLALRVRF*REQPGL
Trigger: GAGGCCAGGCTGTTCACGCAAGAACCGCACCCGCAG...GGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCCACCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CAA 90 bp TGGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGCCCTGCTGAGCACGCTCTaGTGTCCGCTGGGGGTCAGC +
Preference number: 5 (lower is better)
Translates to: WRWGWRAAGVHQGGPGLALLSTL*CPLGVS
Trigger: GCTGACCCCCAGCGGACACAAGAGCGTGCTCAGCAG...GGCCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS GCA 90 bp GCTGGCAGCACTTGGGAAGCCCCAGCGGCTCCTCATCGGTGGCCCTaGCGGTCCAGATGGGATGGTAAGGGCCGGTGGCCACAGCGCAGC +
Preference number: 5 (lower is better)
Translates to: AGSTWEAPAAPHRWP*RSRWDGKGRWPQRS
Trigger: GCTGCGCTGTGGCCACCGGCCCTTACCATCCCATCTGGACCGGCAGGGCCACCGATGAGGAGCCGCTGGGGCTTCCCAAGTGCTGCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS GCA 90 bp GTAGGGCACCTGAGCCTTCTGAGTCACCAGTCCCGCCACCCCCGCTaGCTGCCTGGCCCAGACGGCAGTGGCTGCGGGTGCGGTTCTTGC +
Preference number: 5 (lower is better)
Translates to: VGHLSLLSHQSRHPR*LPGPDGSGCGCGSC
Trigger: GCAAGAACCGCACCCGCAGCCACTGCCGTCTGGGCCAGGCAGGCAGCGGGGGTGGCGGGACTGGTGACTCAGAAGGCTCAGGTGCCCTAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CAA 90 bp GAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGCCTGCCTGCTGGGGGCAGCTaGTCGTCACCTTGGGCTCAT +
Preference number: 5 (lower is better)
Translates to: EMGVAGGRRPSGRTWPGLPAGGS*SSPWAH
Trigger: ATGAGCCCAAGGTGACGACAAGCTGCCCCCAGCAGG...CAGGCCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CAA 90 bp TGGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGCCCCTGCTGGGGGCAGCTaGTCGTCACCTTGGGCTCAT +
Preference number: 5 (lower is better)
Translates to: WRWGWRAAGVHQGGPGLAPAGGS*SSPWAH
Trigger: ATGAGCCCAAGGTGACGACAAGCTGCCCCCAGCAGG...GGCCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CAA 90 bp GCGATCTGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAGGCCGCCCGGCTGGCTaGGCGGCGTGGAGAGAGACC +
Preference number: 5 (lower is better)
Translates to: AIWVGGGVLEQTLPPNPVGRPAG*AAWRET
Trigger: GGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCC...TACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCAGATCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS CCA 90 bp TGGGAAGCCCCAGCGGCTCCTCATCGGTGGCCCTGCCGGTCCAGATaGGATGGTAAGGGCCGGTGGCCACAGCGCAGCCCTGCAGGTCAT +
Preference number: 5 (lower is better)
Translates to: WEAPAAPHRWPCRSR*DGKGRWPQRSPAGH
Trigger: ATGACCTGCAGGGCTGCGCTGTGGCCACCGGCCCTTACCATCCCATCTGGACCGGCAGGGCCACCGATGAGGAGCCGCTGGGGCTTCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS CCA 90 bp CCTGAGCCTTCTGAGTCACCAGTCCCGCCACCCCCGCTGCCTGCCTaGCCCAGACGGCAGTGGCTGCGGGTGCGGTTCTTGCGTGAACAG +
Preference number: 5 (lower is better)
Translates to: PEPSESPVPPPPLPA*PRRQWLRVRFLREQ
Trigger: CTGTTCACGCAAGAACCGCACCCGCAGCCACTGCCGTCTGGGCCAGGCAGGCAGCGGGGGTGGCGGGACTGGTGACTCAGAAGGCTCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CAA 90 bp GGTGGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGACATGCGAGATGCGGTaGCCGTGCAGGAAGATGCGC +
Preference number: 5 (lower is better)
Translates to: GGDGGGGRQASIREDLAWTCEMR*PCRKMR
Trigger: GCGCATCTTCCTGCACGGCAACCGCATCTCGCATGT...CCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CAA 90 bp TGGGGTGGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCACCCAGGGGTTGTCGTaGAGCCTCAGGTACTGCAGG +
Preference number: 5 (lower is better)
Translates to: WGGDGGGGRQASIREDLATQGLS*SLRYCR
Trigger: CCTGCAGTACCTGAGGCTCAACGACAACCCCTGGGT...GGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCCACCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CAA 90 bp ACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCGTATGTACACTGCTGAGCACGCTCTaGTGTCCGCTGGGGGTCAGC +
Preference number: 5 (lower is better)
Translates to: TGRPPGWLGGVERDPVCTLLSTL*CPLGVS
Trigger: GCTGACCCCCAGCGGACACAAGAGCGTGCTCAGCAG...TGTACATACGGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS GCA 90 bp TGCGGCAGGCACGGAAGCTGGCAGCTGGCACATGCGAGATGCGGTTaGCGTGCAGGAAGATGCGCTGGCTGGCAGCAGGGATGCCCACGG +
Preference number: 5 (lower is better)
Translates to: CGRHGSWQLAHARCG*RAGRCAGWQQGCPR
Trigger: CCGTGGGCATCCCTGCTGCCAGCCAGCGCATCTTCCTGCACGGCAACCGCATCTCGCATGTGCCAGCTGCCAGCTTCCGTGCCTGCCGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
ENST00000469601.1
ENST00000474642.1
CDS GCA 90 bp ACATGGGCCACGCGGTTCTGGTGCAGTAGGAGACGGTCGAGGCTGTaGAGCCCACGGAAGGCGCGCTCGGGCACGCTGGAGATGCGGTTG +
Preference number: 5 (lower is better)
Translates to: TWATRFWCSRRRSRL*SPRKARSGTLEMRL
Trigger: CAACCGCATCTCCAGCGTGCCCGAGCGCGCCTTCCGTGGGCTGCACAGCCTCGACCGTCTCCTACTGCACCAGAACCGCGTGGCCCATGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS GCA 90 bp AGGTCACGGAAGGCATGCGGGTGCACATGGGCCACGCGGTTCTGGTaGAGTAGGAGACGGTCGAGGCTGTGCAGCCCACGGAAGGCGCGC +
Preference number: 5 (lower is better)
Translates to: RSRKACGCTWATRFW*SRRRSRLCSPRKAR
Trigger: GCGCGCCTTCCGTGGGCTGCACAGCCTCGACCGTCTCCTACTGCACCAGAACCGCGTGGCCCATGTGCACCCGCATGCCTTCCGTGACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS GCA 90 bp TGCCCGGCGGGCTGTCACCGGGCGGCACGCGTCCCTTCAGCGCATTaGCTGCCGAAGCTGGTCTTCCAGGCTCCAGTACTGAGGCCTTGT +
Preference number: 5 (lower is better)
Translates to: CPAGCHRAARVPSAH*LPKLVFQAPVLRPC
Trigger: ACAAGGCCTCAGTACTGGAGCCTGGAAGACCAGCTTCGGCAGGCAATGCGCTGAAGGGACGCGTGCCGCCCGGTGACAGCCCGCCGGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS CCA 90 bp CATCTGGCTGGCAGCACTTGGGAAGCCCCAGCGGCTCCTCATCGGTaGCCCTGCCGGTCCAGATGGGATGGTAAGGGCCGGTGGCCACAG +
Preference number: 5 (lower is better)
Translates to: HLAGSTWEAPAAPHR*PCRSRWDGKGRWPQ
Trigger: CTGTGGCCACCGGCCCTTACCATCCCATCTGGACCGGCAGGGCCACCGATGAGGAGCCGCTGGGGCTTCCCAAGTGCTGCCAGCCAGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CAA 90 bp GGTGGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGTCACACACCCAGGGGTaGTCGTTGAGCCTCAGGTAC +
Preference number: 5 (lower is better)
Translates to: GGDGGGGRQASIREDLAWSHTQG*SLSLRY
Trigger: GTACCTGAGGCTCAACGACAACCCCTGGGTGTGTGA...CCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CAA 90 bp TGGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGCCCCAAAGGGTGAGTCATaGATGTGCCGTGGGCCAGAG +
Preference number: 5 (lower is better)
Translates to: WRWGWRAAGVHQGGPGLAPKGES*MCRGPE
Trigger: CTCTGGCCCACGGCACATCAATGACTCACCCTTTGG...GGCCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CAA 90 bp GGAGATGGGGGTGGCGGGCGGCAGGCGTCCATCAGGGAGGACCTGGCCTGGCCTCCAAAGGGTGAGTCATaGATGTGCCGTGGGCCAGAG +
Preference number: 5 (lower is better)
Translates to: GDGGGGRQASIREDLAWPPKGES*MCRGPE
Trigger: CTCTGGCCCACGGCACATCAATGACTCACCCTTTGG...AGGCCAGGCCAGGTCCTCCCTGATGGACGCCTGCCGCCCGCCACCCCCATCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CAA 90 bp GGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGATGGGGTGGGGCCGCCCGGCTGGCTaGGCGGCGTGGAGAGAGACC +
Preference number: 5 (lower is better)
Translates to: GGVLEQTLPPNPVNMMGWGRPAG*AAWRET
Trigger: GGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCC...CCACCCCATCATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS GCA 90 bp CAGGCACGGAAGCTGGCAGCTGGCACATGCGAGATGCGGTTGCCGTaGAGGAAGATGCGCTGGCTGGCAGCAGGGATGCCCACGGGCACA +
Preference number: 5 (lower is better)
Translates to: QARKLAAGTCEMRLP*RKMRWLAAGMPTGT
Trigger: TGTGCCCGTGGGCATCCCTGCTGCCAGCCAGCGCATCTTCCTGCACGGCAACCGCATCTCGCATGTGCCAGCTGCCAGCTTCCGTGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
ENST00000469601.1
ENST00000474642.1
CDS CCA 90 bp AGGCCGCAGCGGTCCAGGTGCAGCGTGTGTAGGCGGCCCAGGCCGTaGAATGTGGCAGGGTCCACAGACCGGAGCTGTGCATTATCGCTG +
Preference number: 5 (lower is better)
Translates to: RPQRSRCSVCRRPRP*NVAGSTDRSCALSL
Trigger: CAGCGATAATGCACAGCTCCGGTCTGTGGACCCTGCCACATTCCACGGCCTGGGCCGCCTACACACGCTGCACCTGGACCGCTGCGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
ENST00000469601.1
CDS CCA 90 bp CCAAGGTCACGGAAGGCATGCGGGTGCACATGGGCCACGCGGTTCTaGTGCAGTAGGAGACGGTCGAGGCTGTGCAGCCCACGGAAGGCG +
Preference number: 5 (lower is better)
Translates to: PRSRKACGCTWATRF*CSRRRSRLCSPRKA
Trigger: CGCCTTCCGTGGGCTGCACAGCCTCGACCGTCTCCTACTGCACCAGAACCGCGTGGCCCATGTGCACCCGCATGCCTTCCGTGACCTTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS CCA 90 bp GCTCCAGTACTGAGGCCTTGTCAGCGGCATCTGGCTGGCAGCACTTaGGAAGCCCCAGCGGCTCCTCATCGGTGGCCCTGCCGGTCCAGA +
Preference number: 5 (lower is better)
Translates to: APVLRPCQRHLAGST*EAPAAPHRWPCRSR
Trigger: TCTGGACCGGCAGGGCCACCGATGAGGAGCCGCTGGGGCTTCCCAAGTGCTGCCAGCCAGATGCCGCTGACAAGGCCTCAGTACTGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS CCA 90 bp GGTCTTCCAGGCTCCAGTACTGAGGCCTTGTCAGCGGCATCTGGCTaGCAGCACTTGGGAAGCCCCAGCGGCTCCTCATCGGTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: GLPGSSTEALSAASG*QHLGSPSGSSSVAL
Trigger: CAGGGCCACCGATGAGGAGCCGCTGGGGCTTCCCAAGTGCTGCCAGCCAGATGCCGCTGACAAGGCCTCAGTACTGGAGCCTGGAAGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CAA 90 bp ACGGGTCGGCCGCCCGGCTGGCTTGGCGGCGTGGAGAGAGACCCCGTATGTACATCACACACCCAGGGGTaGTCGTTGAGCCTCAGGTAC +
Preference number: 5 (lower is better)
Translates to: TGRPPGWLGGVERDPVCTSHTQG*SLSLRY
Trigger: GTACCTGAGGCTCAACGACAACCCCTGGGTGTGTGA...TGTACATACGGGGTCTCTCTCCACGCCGCCAAGCCAGCCGGGCGGCCGACCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS GCA 90 bp TCCTGGGGCACGTGCCAGAATCAGACAGTCCCACCGTCATGCAGGTaGTGGGGCCTTCAGTCAGCAGGACCAGGCAGCCCATGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: SWGTCQNQTVPPSCR*WGLQSAGPGSPCPG
Trigger: CCCAGGACATGGGCTGCCTGGTCCTGCTGACTGAAGGCCCCAGCACCTGCATGACGGTGGGACTGTCTGATTCTGGCACGTGCCCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474642.1
CDS GCA 90 bp GGCTGCTCCTGGGGCACGTGCCAGAATCAGACAGTCCCACCGTCATaGAGGTGCTGGGGCCTTCAGTCAGCAGGACCAGGCAGCCCATGT +
Preference number: 5 (lower is better)
Translates to: GCSWGTCQNQTVPPS*RCWGLQSAGPGSPC
Trigger: ACATGGGCTGCCTGGTCCTGCTGACTGAAGGCCCCAGCACCTGCATGACGGTGGGACTGTCTGATTCTGGCACGTGCCCCAGGAGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474642.1
CDS CCA 90 bp AGTGTCATGAGGCGGCCAAGGTCACGGAAGGCATGCGGGTGCACATaGGCCACGCGGTTCTGGTGCAGTAGGAGACGGTCGAGGCTGTGC +
Preference number: 5 (lower is better)
Translates to: SVMRRPRSRKACGCT*ATRFWCSRRRSRLC
Trigger: GCACAGCCTCGACCGTCTCCTACTGCACCAGAACCGCGTGGCCCATGTGCACCCGCATGCCTTCCGTGACCTTGGCCGCCTCATGACACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS CCA 90 bp CAGGTGCTGGGGCCTTCAGTCAGCAGGACCAGGCAGCCCATGTCCTaGGGACCCTTGGGGAGGTGTGGGCATTTGCTGAGTTGGGCTGTC +
Preference number: 5 (lower is better)
Translates to: QVLGPSVSRTRQPMS*GPLGRCGHLLSWAV
Trigger: GACAGCCCAACTCAGCAAATGCCCACACCTCCCCAAGGGTCCCCAGGACATGGGCTGCCTGGTCCTGCTGACTGAAGGCCCCAGCACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474642.1
CDS CCA 90 bp TGGGGCACGTGCCAGAATCAGACAGTCCCACCGTCATGCAGGTGCTaGGGCCTTCAGTCAGCAGGACCAGGCAGCCCATGTCCTGGGGAC +
Preference number: 5 (lower is better)
Translates to: WGTCQNQTVPPSCRC*GLQSAGPGSPCPGD
Trigger: GTCCCCAGGACATGGGCTGCCTGGTCCTGCTGACTGAAGGCCCCAGCACCTGCATGACGGTGGGACTGTCTGATTCTGGCACGTGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474642.1
CDS GCA 90 bp GCAGGGTCCACAGACCGGAGCTGTGCATTATCGCTGAGGTCCAGCTaGTCCAGGAGGGCCAGGCCAGTGAAGGCAGCCGCATCAATTCGG +
Preference number: 5 (lower is better)
Translates to: AGSTDRSCALSLRSS*SRRARPVKAAASIR
Trigger: CCGAATTGATGCGGCTGCCTTCACTGGCCTGGCCCTCCTGGAGCAGCTGGACCTCAGCGATAATGCACAGCTCCGGTCTGTGGACCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
ENST00000469601.1
CDS-3UTR CAA 90 bp GACCCCGTATGTACACACACCTGGCTGCTGAGCACGCTCTTGTGTCCGCTGGGGCACAGGATGGTGAGGTaGCGGCAGGCACGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: DPVCTHTWLLSTLLCPLGHRMVR*RQARKL
Trigger: CAGCTTCCGTGCCTGCCGCAACCTCACCATCCTGTG...CCCCAGCGGACACAAGAGCGTGCTCAGCAGCCAGGTGTGTGTACATACGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CAA 90 bp AACGCTGCCGCCGAACCCTGTAAACATGATGGGGTGGAGATGGGGGTGGCGGGCAAGAGGTGTGTGAGGTaGCCCAGGTCGCGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: NAAAEPCKHDGVEMGVAGKRCVR*PRSRKV
Trigger: CACCTTCCGCGACCTGGGCAACCTCACACACCTCTT...GCCCGCCACCCCCATCTCCACCCCATCATGTTTACAGGGTTCGGCGGCAGCGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CAA 90 bp GCGATCTGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAACCCAGGGGTTGTCGTaGAGCCTCAGGTACTGCAGG +
Preference number: 5 (lower is better)
Translates to: AIWVGGGVLEQTLPPNPVTQGLS*SLRYCR
Trigger: CCTGCAGTACCTGAGGCTCAACGACAACCCCTGGGT...TACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCAGATCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS TCA 90 bp CCGCATCAATTCGGGCCAGCACATTCGAGTGCAGCCACAGGATGGTaGGGTTGCGGCAGGCACGGAAGCTGGCAGCTGGCACATGCGAGA +
Preference number: 5 (lower is better)
Translates to: PHQFGPAHSSAATGW*GCGRHGSWQLAHAR
Trigger: TCTCGCATGTGCCAGCTGCCAGCTTCCGTGCCTGCCGCAACCTCACCATCCTGTGGCTGCACTCGAATGTGCTGGCCCGAATTGATGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
ENST00000469601.1
CDS TCA 90 bp CTTCAGCGCATTGCCTGCCGAAGCTGGTCTTCCAGGCTCCAGTACTaGGGCCTTGTCAGCGGCATCTGGCTGGCAGCACTTGGGAAGCCC +
Preference number: 5 (lower is better)
Translates to: LQRIACRSWSSRLQY*GLVSGIWLAALGKP
Trigger: GGGCTTCCCAAGTGCTGCCAGCCAGATGCCGCTGACAAGGCCTCAGTACTGGAGCCTGGAAGACCAGCTTCGGCAGGCAATGCGCTGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS GCA 90 bp AGGCCAGTGAAGGCAGCCGCATCAATTCGGGCCAGCACATTCGAGTaGAGCCACAGGATGGTGAGGTTGCGGCAGGCACGGAAGCTGGCA +
Preference number: 5 (lower is better)
Translates to: RPVKAAASIRASTFE*SHRMVRLRQARKLA
Trigger: TGCCAGCTTCCGTGCCTGCCGCAACCTCACCATCCTGTGGCTGCACTCGAATGTGCTGGCCCGAATTGATGCGGCTGCCTTCACTGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
ENST00000469601.1
CDS-3UTR CAA 90 bp GGAGAGAGACCCCGTATGTACACACACCTGGCTGCTGAGCACGCTCTTGTGTCCCTGCGGGTGCGGTTCTaGCGTGAACAGCCTGGCCTC +
Preference number: 5 (lower is better)
Translates to: GERPRMYTHLAAEHALVSLRVRF*REQPGL
Trigger: GAGGCCAGGCTGTTCACGCAAGAACCGCACCCGCAG...GGACACAAGAGCGTGCTCAGCAGCCAGGTGTGTGTACATACGGGGTCTCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CAA 90 bp CTGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATCCAGCAGCCGGCTCCTaGAAGGCCTCCTGGAATGGA +
Preference number: 5 (lower is better)
Translates to: LGGRRRSGTNAAAEPCKHPAAGS*KASWNG
Trigger: TCCATTCCAGGAGGCCTTCAAGGAGCCGGCTGCTGG...ATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425986.1
CDS TCA 90 bp ATGCCAGCAGCCGGCTCCTTGAAGGCCTCCTGGAATGGACACTGGTaGCTGCAGGTACCTCCTCAGGACTCCAGTGAACACAGAGCCCGC +
Preference number: 5 (lower is better)
Translates to: MPAAGSLKASWNGHW*LQVPPQDSSEHRAR
Trigger: GCGGGCTCTGTGTTCACTGGAGTCCTGAGGAGGTACCTGCAGTCACCAGTGTCCATTCCAGGAGGCCTTCAAGGAGCCGGCTGCTGGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425986.1
CDS CCA 90 bp ATAAAACTGTTCTGGCCAGCAGCCCTCATCCGCAGGGGCTGCTCCTaGGGCACGTGCCAGAATCAGACAGTCCCACCGTCATGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: IKLFWPAALIRRGCS*GTCQNQTVPPSCRC
Trigger: GCACCTGCATGACGGTGGGACTGTCTGATTCTGGCACGTGCCCCAGGAGCAGCCCCTGCGGATGAGGGCTGCTGGCCAGAACAGTTTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474642.1
CDS-3UTR CAA 90 bp TGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGACATGCGAGATGCGGTaGCCGTGCAGGAAGATGCGC +
Preference number: 5 (lower is better)
Translates to: WVGGGVLEQTLPPNPVNMTCEMR*PCRKMR
Trigger: GCGCATCTTCCTGCACGGCAACCGCATCTCGCATGT...CATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CAA 90 bp GGAGAGAGACCCCGTATGTACACACACCTGGCTGCTGAGCACGCTCTTGTGTCCCACAGGATGGTGAGGTaGCGGCAGGCACGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: GERPRMYTHLAAEHALVSHRMVR*RQARKL
Trigger: CAGCTTCCGTGCCTGCCGCAACCTCACCATCCTGTG...GGACACAAGAGCGTGCTCAGCAGCCAGGTGTGTGTACATACGGGGTCTCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CAA 90 bp CGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGATGGGGTGGAGCACAGGATGGTGAGGTaGCGGCAGGCACGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: RRSGTNAAAEPCKHDGVEHRMVR*RQARKL
Trigger: CAGCTTCCGTGCCTGCCGCAACCTCACCATCCTGTG...CTCCACCCCATCATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CAA 90 bp GGAGAGAGACCCCGTATGTACACACACCTGGCTGCTGAGCACGCTCTTGTGTCCTTGGCAGCTAGGCGTTaGAGGTCACGGCCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: GERPRMYTHLAAEHALVSLAARR*RSRPAR
Trigger: CCTGGCTGGCCGTGACCTCAAACGCCTAGCTGCCAA...GGACACAAGAGCGTGCTCAGCAGCCAGGTGTGTGTACATACGGGGTCTCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CAA 90 bp TGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGCAGCCCTGCAGGTCATaGGCAGCTAGGCGTTTGAGG +
Preference number: 5 (lower is better)
Translates to: WVGGGVLEQTLPPNPVNMQPCRS*AARRLR
Trigger: CCTCAAACGCCTAGCTGCCAATGACCTGCAGGGCTG...CATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CAA 90 bp TGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATGCGTCCCTTCAGCGCATaGCCTGCCGAAGCTGGTCTT +
Preference number: 5 (lower is better)
Translates to: WVGGGVLEQTLPPNPVNMRPFSA*PAEAGL
Trigger: AAGACCAGCTTCGGCAGGCAATGCGCTGAAGGGACG...CATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CAA 90 bp GGAGAGAGACCCCGTATGTACACACACCTGGCTGCTGAGCACGCTCTTGTGTCCACGCTGGAGATGCGGTaGCCGTGCAGGAAGAGGTGT +
Preference number: 5 (lower is better)
Translates to: GERPRMYTHLAAEHALVSTLEMR*PCRKRC
Trigger: ACACCTCTTCCTGCACGGCAACCGCATCTCCAGCGT...GGACACAAGAGCGTGCTCAGCAGCCAGGTGTGTGTACATACGGGGTCTCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CAA 90 bp CTGGGTGGGAGGCGGCGTTCTGGAACAAACGCTGCCGCCGAACCCTGTAAACATCCAAAGGGTGAGTCATaGATGTGCCGTGGGCCAGAG +
Preference number: 5 (lower is better)
Translates to: LGGRRRSGTNAAAEPCKHPKGES*MCRGPE
Trigger: CTCTGGCCCACGGCACATCAATGACTCACCCTTTGG...ATGTTTACAGGGTTCGGCGGCAGCGTTTGTTCCAGAACGCCGCCTCCCACCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS TCA 90 bp CAGTGGGCAGCGCTGATAGATTGTTGGCAAACAGATAGAGTGTCATaGGGCGGCCAAGGTCACGGAAGGCATGCGGGTGCACATGGGCCA +
Preference number: 5 (lower is better)
Translates to: QWAALIDCWQTDRVS*GGQGHGRHAGAHGP
Trigger: TGGCCCATGTGCACCCGCATGCCTTCCGTGACCTTGGCCGCCTCATGACACTCTATCTGTTTGCCAACAATCTATCAGCGCTGCCCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS TCA 90 bp CACCCATGCCAGCAGCCGGCTCCCAATGCCAGATGCTCACAACGGTaGAACTGGTGTGTGGTAGATGCGATCTCTCTGTACTGTCTTCTC +
Preference number: 5 (lower is better)
Translates to: HPCQQPAPNARCSQR*NWCVVDAISLYCLL
Trigger: GAGAAGACAGTACAGAGAGATCGCATCTACCACACACCAGTTTCACCGTTGTGAGCATCTGGCATTGGGAGCCGGCTGCTGGCATGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474642.1
CDS-3UTR CAA 90 bp AATAAAATGCATATCTCTATATACCGCGATCTGGGTGGGAGGCGGCGTTCTGGACTGCTGAGCACGCTCTaGTGTCCGCTGGGGGTCAGC +
Preference number: 5 (lower is better)
Translates to: NKMHISIYRDLGGRRRSGLLSTL*CPLGVS
Trigger: GCTGACCCCCAGCGGACACAAGAGCGTGCTCAGCAG...TCCAGAACGCCGCCTCCCACCCAGATCGCGGTATATAGAGATATGCATTTTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CAA 90 bp ATAAAATGCATATCTCTATATACCGCGATCTGGGTGGGAGGCGGCGTTCTGGAACCTGCTGGGGGCAGCTaGTCGTCACCTTGGGCTCAT +
Preference number: 5 (lower is better)
Translates to: IKCISLYTAIWVGGGVLEPAGGS*SSPWAH
Trigger: ATGAGCCCAAGGTGACGACAAGCTGCCCCCAGCAGG...TTCCAGAACGCCGCCTCCCACCCAGATCGCGGTATATAGAGATATGCATTTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CAA 90 bp ATAAAATGCATATCTCTATATACCGCGATCTGGGTGGGAGGCGGCGTTCTGGAATTGGCAGCTAGGCGTTaGAGGTCACGGCCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: IKCISLYTAIWVGGGVLELAARR*RSRPAR
Trigger: CCTGGCTGGCCGTGACCTCAAACGCCTAGCTGCCAA...TTCCAGAACGCCGCCTCCCACCCAGATCGCGGTATATAGAGATATGCATTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CAA 90 bp ATAAAATGCATATCTCTATATACCGCGATCTGGGTGGGAGGCGGCGTTCTGGAAAAGAGGTGTGTGAGGTaGCCCAGGTCGCGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: IKCISLYTAIWVGGGVLEKRCVR*PRSRKV
Trigger: CACCTTCCGCGACCTGGGCAACCTCACACACCTCTT...TTCCAGAACGCCGCCTCCCACCCAGATCGCGGTATATAGAGATATGCATTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CAA 90 bp AATAAAATGCATATCTCTATATACCGCGATCTGGGTGGGAGGCGGCGTTCTGGAAAGAGGTGTGTGAGGTaGCCCAGGTCGCGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: NKMHISIYRDLGGRRRSGKRCVR*PRSRKV
Trigger: CACCTTCCGCGACCTGGGCAACCTCACACACCTCTT...TCCAGAACGCCGCCTCCCACCCAGATCGCGGTATATAGAGATATGCATTTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS-3UTR CAA 90 bp AATAAAATGCATATCTCTATATACCGCGATCTGGGTGGGAGGCGGCGTTCTGGAACCCAGGGGTTGTCGTaGAGCCTCAGGTACTGCAGG +
Preference number: 5 (lower is better)
Translates to: NKMHISIYRDLGGRRRSGTQGLS*SLRYCR
Trigger: CCTGCAGTACCTGAGGCTCAACGACAACCCCTGGGT...TCCAGAACGCCGCCTCCCACCCAGATCGCGGTATATAGAGATATGCATTTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS GCA 72 bp CCTGGCCCAGACGGCAGTGGCTGCGGGTGCGGTTCTTaGGTGAACAGCCTGGCCTCCGGCGAGGGCCCGAGG +
Preference number: 6 (lower is better)
Translates to: PGPDGSGCGCGS*VNSLASGEGPR
Trigger: CCTCGGGCCCTCGCCGGAGGCCAGGCTGTTCACGCAAGAACCGCACCCGCAGCCACTGCCGTCTGGGCCAGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS CAA 72 bp GCCTGGCCCAGACGGCAGTGGCTGCGGGTGCGGTTCTaGCGTGAACAGCCTGGCCTCCGGCGAGGGCCCGAG +
Preference number: 6 (lower is better)
Translates to: AWPRRQWLRVRF*REQPGLRRGPE
Trigger: CTCGGGCCCTCGCCGGAGGCCAGGCTGTTCACGCAAGAACCGCACCCGCAGCCACTGCCGTCTGGGCCAGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS CAA 90 bp CCGCTGCCTGCCTGGCCCAGACGGCAGTGGCTGCGGGTGCGGTTCTaGCGTGAACAGCCTGGCCTCCGGCGAGGGCCCGAGGTGGGGAAC +
Preference number: 6 (lower is better)
Translates to: PLPAWPRRQWLRVRF*REQPGLRRGPEVGN
Trigger: GTTCCCCACCTCGGGCCCTCGCCGGAGGCCAGGCTGTTCACGCAAGAACCGCACCCGCAGCCACTGCCGTCTGGGCCAGGCAGGCAGCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS CCA 72 bp CCAGCGGCTCCTCATCGGTGGCCCTGCCGGTCCAGATaGGATGGTAAGGGCCGGTGGCCACAGCGCAGCCCT +
Preference number: 6 (lower is better)
Translates to: PAAPHRWPCRSR*DGKGRWPQRSP
Trigger: AGGGCTGCGCTGTGGCCACCGGCCCTTACCATCCCATCTGGACCGGCAGGGCCACCGATGAGGAGCCGCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS CCA 72 bp TCTGAGTCACCAGTCCCGCCACCCCCGCTGCCTGCCTaGCCCAGACGGCAGTGGCTGCGGGTGCGGTTCTTG +
Preference number: 6 (lower is better)
Translates to: SESPVPPPPLPA*PRRQWLRVRFL
Trigger: CAAGAACCGCACCCGCAGCCACTGCCGTCTGGGCCAGGCAGGCAGCGGGGGTGGCGGGACTGGTGACTCAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS CAA 72 bp AAGGGTGAGTCATTGATGTGCCGTGGGCCAGAGCCGTaGCCCGGCGGGCTGTCACCGGGCGGCACGCGTCCC +
Preference number: 6 (lower is better)
Translates to: KGESLMCRGPEP*PGGLSPGGTRP
Trigger: GGGACGCGTGCCGCCCGGTGACAGCCCGCCGGGCAACGGCTCTGGCCCACGGCACATCAATGACTCACCCTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS GCA 72 bp ACGCGGTTCTGGTGCAGTAGGAGACGGTCGAGGCTGTaGAGCCCACGGAAGGCGCGCTCGGGCACGCTGGAG +
Preference number: 6 (lower is better)
Translates to: TRFWCSRRRSRL*SPRKARSGTLE
Trigger: CTCCAGCGTGCCCGAGCGCGCCTTCCGTGGGCTGCACAGCCTCGACCGTCTCCTACTGCACCAGAACCGCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS CCA 72 bp GGCAGCACTTGGGAAGCCCCAGCGGCTCCTCATCGGTaGCCCTGCCGGTCCAGATGGGATGGTAAGGGCCGG +
Preference number: 6 (lower is better)
Translates to: GSTWEAPAAPHR*PCRSRWDGKGR
Trigger: CCGGCCCTTACCATCCCATCTGGACCGGCAGGGCCACCGATGAGGAGCCGCTGGGGCTTCCCAAGTGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS CAA 90 bp GGCTCCAGTACTGAGGCCTTGTCAGCGGCATCTGGCTGGCAGCACTaGGGAAGCCCCAGCGGCTCCTCATCGGTGGCCCTGCCGGTCCAG +
Preference number: 6 (lower is better)
Translates to: GSSTEALSAASGWQH*GSPSGSSSVALPVQ
Trigger: CTGGACCGGCAGGGCCACCGATGAGGAGCCGCTGGGGCTTCCCAAGTGCTGCCAGCCAGATGCCGCTGACAAGGCCTCAGTACTGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS CAA 90 bp TTGCCCGGCGGGCTGTCACCGGGCGGCACGCGTCCCTTCAGCGCATaGCCTGCCGAAGCTGGTCTTCCAGGCTCCAGTACTGAGGCCTTG +
Preference number: 6 (lower is better)
Translates to: LPGGLSPGGTRPFSA*PAEAGLPGSSTEAL
Trigger: CAAGGCCTCAGTACTGGAGCCTGGAAGACCAGCTTCGGCAGGCAATGCGCTGAAGGGACGCGTGCCGCCCGGTGACAGCCCGCCGGGCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS TCA 72 bp CAGCGCAGCCCTGCAGGTCATTGGCAGCTAGGCGTTTaGGGTCACGGCCAGCCAGGCGTTGCGGGAGGCTGC +
Preference number: 6 (lower is better)
Translates to: QRSPAGHWQLGV*GHGQPGVAGGC
Trigger: GCAGCCTCCCGCAACGCCTGGCTGGCCGTGACCTCAAACGCCTAGCTGCCAATGACCTGCAGGGCTGCGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS GCA 72 bp ACTTGGGAAGCCCCAGCGGCTCCTCATCGGTGGCCCTaGCGGTCCAGATGGGATGGTAAGGGCCGGTGGCCA +
Preference number: 6 (lower is better)
Translates to: TWEAPAAPHRWP*RSRWDGKGRWP
Trigger: TGGCCACCGGCCCTTACCATCCCATCTGGACCGGCAGGGCCACCGATGAGGAGCCGCTGGGGCTTCCCAAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS CCA 72 bp CGGTCCAGGTGCAGCGTGTGTAGGCGGCCCAGGCCGTaGAATGTGGCAGGGTCCACAGACCGGAGCTGTGCA +
Preference number: 6 (lower is better)
Translates to: RSRCSVCRRPRP*NVAGSTDRSCA
Trigger: TGCACAGCTCCGGTCTGTGGACCCTGCCACATTCCACGGCCTGGGCCGCCTACACACGCTGCACCTGGACCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
ENST00000469601.1
CDS CAA 90 bp TTGCGGCAGGCACGGAAGCTGGCAGCTGGCACATGCGAGATGCGGTaGCCGTGCAGGAAGATGCGCTGGCTGGCAGCAGGGATGCCCACG +
Preference number: 6 (lower is better)
Translates to: LRQARKLAAGTCEMR*PCRKMRWLAAGMPT
Trigger: CGTGGGCATCCCTGCTGCCAGCCAGCGCATCTTCCTGCACGGCAACCGCATCTCGCATGTGCCAGCTGCCAGCTTCCGTGCCTGCCGCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
ENST00000469601.1
ENST00000474642.1
CDS GCA 72 bp GGCAGGCACGGAAGCTGGCAGCTGGCACATGCGAGATaGGGTTGCCGTGCAGGAAGATGCGCTGGCTGGCAG +
Preference number: 6 (lower is better)
Translates to: GRHGSWQLAHAR*GCRAGRCAGWQ
Trigger: CTGCCAGCCAGCGCATCTTCCTGCACGGCAACCGCATCTCGCATGTGCCAGCTGCCAGCTTCCGTGCCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
ENST00000469601.1
ENST00000474642.1
CDS GCA 72 bp GGCTGTCACCGGGCGGCACGCGTCCCTTCAGCGCATTaGCTGCCGAAGCTGGTCTTCCAGGCTCCAGTACTG +
Preference number: 6 (lower is better)
Translates to: GCHRAARVPSAH*LPKLVFQAPVL
Trigger: CAGTACTGGAGCCTGGAAGACCAGCTTCGGCAGGCAATGCGCTGAAGGGACGCGTGCCGCCCGGTGACAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS GCA 72 bp GCAGCCCTCATCCGCAGGGGCTGCTCCTGGGGCACGTaGCAGAATCAGACAGTCCCACCGTCATGCAGGTGC +
Preference number: 6 (lower is better)
Translates to: AALIRRGCSWGT*QNQTVPPSCRC
Trigger: GCACCTGCATGACGGTGGGACTGTCTGATTCTGGCACGTGCCCCAGGAGCAGCCCCTGCGGATGAGGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474642.1
CDS CCA 72 bp CGGAAGGCATGCGGGTGCACATGGGCCACGCGGTTCTaGTGCAGTAGGAGACGGTCGAGGCTGTGCAGCCCA +
Preference number: 6 (lower is better)
Translates to: RKACGCTWATRF*CSRRRSRLCSP
Trigger: TGGGCTGCACAGCCTCGACCGTCTCCTACTGCACCAGAACCGCGTGGCCCATGTGCACCCGCATGCCTTCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS CCA 72 bp AGGCGGCCAAGGTCACGGAAGGCATGCGGGTGCACATaGGCCACGCGGTTCTGGTGCAGTAGGAGACGGTCG +
Preference number: 6 (lower is better)
Translates to: RRPRSRKACGCT*ATRFWCSRRRS
Trigger: CGACCGTCTCCTACTGCACCAGAACCGCGTGGCCCATGTGCACCCGCATGCCTTCCGTGACCTTGGCCGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS CCA 72 bp TGGCCCTGCCGGTCCAGATGGGATGGTAAGGGCCGGTaGCCACAGCGCAGCCCTGCAGGTCATTGGCAGCTA +
Preference number: 6 (lower is better)
Translates to: WPCRSRWDGKGR*PQRSPAGHWQL
Trigger: TAGCTGCCAATGACCTGCAGGGCTGCGCTGTGGCCACCGGCCCTTACCATCCCATCTGGACCGGCAGGGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS CAA 72 bp GCACGGAAGCTGGCAGCTGGCACATGCGAGATGCGGTaGCCGTGCAGGAAGATGCGCTGGCTGGCAGCAGGG +
Preference number: 6 (lower is better)
Translates to: ARKLAAGTCEMR*PCRKMRWLAAG
Trigger: CCCTGCTGCCAGCCAGCGCATCTTCCTGCACGGCAACCGCATCTCGCATGTGCCAGCTGCCAGCTTCCGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
ENST00000469601.1
ENST00000474642.1
CDS CAA 72 bp CAGAGTGGGCGTGCCCGGCAGTCACACACCCAGGGGTaGTCGTTGAGCCTCAGGTACTGCAGGGCACGCAGG +
Preference number: 6 (lower is better)
Translates to: QSGRARQSHTQG*SLSLRYCRARR
Trigger: CCTGCGTGCCCTGCAGTACCTGAGGCTCAACGACAACCCCTGGGTGTGTGACTGCCGGGCACGCCCACTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS CAA 72 bp ACAGCGCAGCCCTGCAGGTCATTGGCAGCTAGGCGTTaGAGGTCACGGCCAGCCAGGCGTTGCGGGAGGCTG +
Preference number: 6 (lower is better)
Translates to: TAQPCRSLAARR*RSRPARRCGRL
Trigger: CAGCCTCCCGCAACGCCTGGCTGGCCGTGACCTCAAACGCCTAGCTGCCAATGACCTGCAGGGCTGCGCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS CAA 72 bp GGGCTGTCACCGGGCGGCACGCGTCCCTTCAGCGCATaGCCTGCCGAAGCTGGTCTTCCAGGCTCCAGTACT +
Preference number: 6 (lower is better)
Translates to: GLSPGGTRPFSA*PAEAGLPGSST
Trigger: AGTACTGGAGCCTGGAAGACCAGCTTCGGCAGGCAATGCGCTGAAGGGACGCGTGCCGCCCGGTGACAGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS GCA 72 bp AAGCTGGCAGCTGGCACATGCGAGATGCGGTTGCCGTaGAGGAAGATGCGCTGGCTGGCAGCAGGGATGCCC +
Preference number: 6 (lower is better)
Translates to: KLAAGTCEMRLP*RKMRWLAAGMP
Trigger: GGGCATCCCTGCTGCCAGCCAGCGCATCTTCCTGCACGGCAACCGCATCTCGCATGTGCCAGCTGCCAGCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
ENST00000469601.1
ENST00000474642.1
CDS GCA 72 bp CACGGAAGCTGGCAGCTGGCACATGCGAGATGCGGTTaGCGTGCAGGAAGATGCGCTGGCTGGCAGCAGGGA +
Preference number: 6 (lower is better)
Translates to: HGSWQLAHARCG*RAGRCAGWQQG
Trigger: TCCCTGCTGCCAGCCAGCGCATCTTCCTGCACGGCAACCGCATCTCGCATGTGCCAGCTGCCAGCTTCCGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
ENST00000469601.1
ENST00000474642.1
CDS CCA 72 bp GGTGCAGCGTGTGTAGGCGGCCCAGGCCGTGGAATGTaGCAGGGTCCACAGACCGGAGCTGTGCATTATCGC +
Preference number: 6 (lower is better)
Translates to: GAACVGGPGRGM*QGPQTGAVHYR
Trigger: GCGATAATGCACAGCTCCGGTCTGTGGACCCTGCCACATTCCACGGCCTGGGCCGCCTACACACGCTGCACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
ENST00000469601.1
CDS CCA 72 bp GGCTCCAGTACTGAGGCCTTGTCAGCGGCATCTGGCTaGCAGCACTTGGGAAGCCCCAGCGGCTCCTCATCG +
Preference number: 6 (lower is better)
Translates to: GSSTEALSAASG*QHLGSPSGSSS
Trigger: CGATGAGGAGCCGCTGGGGCTTCCCAAGTGCTGCCAGCCAGATGCCGCTGACAAGGCCTCAGTACTGGAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS CAA 90 bp GCATTGCCTGCCGAAGCTGGTCTTCCAGGCTCCAGTACTGAGGCCTaGTCAGCGGCATCTGGCTGGCAGCACTTGGGAAGCCCCAGCGGC +
Preference number: 6 (lower is better)
Translates to: ALPAEAGLPGSSTEA*SAASGWQHLGSPSG
Trigger: GCCGCTGGGGCTTCCCAAGTGCTGCCAGCCAGATGCCGCTGACAAGGCCTCAGTACTGGAGCCTGGAAGACCAGCTTCGGCAGGCAATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS TCA 72 bp TTCGGGCCAGCACATTCGAGTGCAGCCACAGGATGGTaGGGTTGCGGCAGGCACGGAAGCTGGCAGCTGGCA +
Preference number: 6 (lower is better)
Translates to: FGPAHSSAATGW*GCGRHGSWQLA
Trigger: TGCCAGCTGCCAGCTTCCGTGCCTGCCGCAACCTCACCATCCTGTGGCTGCACTCGAATGTGCTGGCCCGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
ENST00000469601.1
CDS GCA 72 bp GTCATGAGGCGGCCAAGGTCACGGAAGGCATGCGGGTaGACATGGGCCACGCGGTTCTGGTGCAGTAGGAGA +
Preference number: 6 (lower is better)
Translates to: VMRRPRSRKACG*TWATRFWCSRR
Trigger: TCTCCTACTGCACCAGAACCGCGTGGCCCATGTGCACCCGCATGCCTTCCGTGACCTTGGCCGCCTCATGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS GCA 72 bp TGGGGCACGTGCCAGAATCAGACAGTCCCACCGTCATaGAGGTGCTGGGGCCTTCAGTCAGCAGGACCAGGC +
Preference number: 6 (lower is better)
Translates to: WGTCQNQTVPPS*RCWGLQSAGPG
Trigger: GCCTGGTCCTGCTGACTGAAGGCCCCAGCACCTGCATGACGGTGGGACTGTCTGATTCTGGCACGTGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474642.1
CDS CCA 72 bp CCTGCAGGCCCTGCTGGGGGCAGCTTGTCGTCACCTTaGGCTCATTGTAGCATACGCAGGCACCTGGGCATG +
Preference number: 6 (lower is better)
Translates to: PAGPAGGSLSSP*AHCSIRRHLGM
Trigger: CATGCCCAGGTGCCTGCGTATGCTACAATGAGCCCAAGGTGACGACAAGCTGCCCCCAGCAGGGCCTGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
ENST00000469601.1
ENST00000474642.1
CDS CAA 72 bp CCCGTATGTACACACACCTGGCTGCTGAGCACGCTCTaGTGTCCGCTGGGGGTCAGCAGGGCCCAAGCACTG +
Preference number: 6 (lower is better)
Translates to: PVCTHTWLLSTL*CPLGVSRAQAL
Trigger: CAGTGCTTGGGCCCTGCTGACCCCCAGCGGACACAAGAGCGTGCTCAGCAGCCAGGTGTGTGTACATACGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS CAA 90 bp TCAATTCGGGCCAGCACATTCGAGTGCAGCCACAGGATGGTGAGGTaGCGGCAGGCACGGAAGCTGGCAGCTGGCACATGCGAGATGCGG +
Preference number: 6 (lower is better)
Translates to: SIRASTFECSHRMVR*RQARKLAAGTCEMR
Trigger: CCGCATCTCGCATGTGCCAGCTGCCAGCTTCCGTGCCTGCCGCAACCTCACCATCCTGTGGCTGCACTCGAATGTGCTGGCCCGAATTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
ENST00000469601.1
CDS CAA 90 bp GAGAGAGACCCCGTATGTACACACACCTGGCTGCTGAGCACGCTCTaGTGTCCGCTGGGGGTCAGCAGGGCCCAAGCACTGTCCACAGCA +
Preference number: 6 (lower is better)
Translates to: ERDPVCTHTWLLSTL*CPLGVSRAQALSTA
Trigger: TGCTGTGGACAGTGCTTGGGCCCTGCTGACCCCCAGCGGACACAAGAGCGTGCTCAGCAGCCAGGTGTGTGTACATACGGGGTCTCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS TCA 72 bp TGGAGAGAGACCCCGTATGTACACACACCTGGCTGCTaGGCACGCTCTTGTGTCCGCTGGGGGTCAGCAGGG +
Preference number: 6 (lower is better)
Translates to: WRETPYVHTPGC*ARSCVRWGSAG
Trigger: CCCTGCTGACCCCCAGCGGACACAAGAGCGTGCTCAGCAGCCAGGTGTGTGTACATACGGGGTCTCTCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS GCA 72 bp ACGTGCCAGAATCAGACAGTCCCACCGTCATGCAGGTaGTGGGGCCTTCAGTCAGCAGGACCAGGCAGCCCA +
Preference number: 6 (lower is better)
Translates to: TCQNQTVPPSCR*WGLQSAGPGSP
Trigger: TGGGCTGCCTGGTCCTGCTGACTGAAGGCCCCAGCACCTGCATGACGGTGGGACTGTCTGATTCTGGCACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474642.1
CDS GCA 72 bp AAACTGTTCTGGCCAGCAGCCCTCATCCGCAGGGGCTaGTCCTGGGGCACGTGCCAGAATCAGACAGTCCCA +
Preference number: 6 (lower is better)
Translates to: KLFWPAALIRRG*SWGTCQNQTVP
Trigger: TGGGACTGTCTGATTCTGGCACGTGCCCCAGGAGCAGCCCCTGCGGATGAGGGCTGCTGGCCAGAACAGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474642.1
CDS CAA 72 bp GCCGAAGCTGGTCTTCCAGGCTCCAGTACTGAGGCCTaGTCAGCGGCATCTGGCTGGCAGCACTTGGGAAGC +
Preference number: 6 (lower is better)
Translates to: AEAGLPGSSTEA*SAASGWQHLGS
Trigger: GCTTCCCAAGTGCTGCCAGCCAGATGCCGCTGACAAGGCCTCAGTACTGGAGCCTGGAAGACCAGCTTCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS CCA 72 bp TGCCAGAATCAGACAGTCCCACCGTCATGCAGGTGCTaGGGCCTTCAGTCAGCAGGACCAGGCAGCCCATGT +
Preference number: 6 (lower is better)
Translates to: CQNQTVPPSCRC*GLQSAGPGSPC
Trigger: ACATGGGCTGCCTGGTCCTGCTGACTGAAGGCCCCAGCACCTGCATGACGGTGGGACTGTCTGATTCTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474642.1
CDS TCA 72 bp ATTGCCTGCCGAAGCTGGTCTTCCAGGCTCCAGTACTaGGGCCTTGTCAGCGGCATCTGGCTGGCAGCACTT +
Preference number: 6 (lower is better)
Translates to: IACRSWSSRLQY*GLVSGIWLAAL
Trigger: AAGTGCTGCCAGCCAGATGCCGCTGACAAGGCCTCAGTACTGGAGCCTGGAAGACCAGCTTCGGCAGGCAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS TCA 72 bp TGTCCTGGGGACCCTTGGGGAGGTGTGGGCATTTGCTaGGTTGGGCTGTCATTTGCTAGACAGGCGCTTGGC +
Preference number: 6 (lower is better)
Translates to: CPGDPWGGVGIC*VGLSFARQALG
Trigger: GCCAAGCGCCTGTCTAGCAAATGACAGCCCAACTCAGCAAATGCCCACACCTCCCCAAGGGTCCCCAGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474642.1
CDS CAA 72 bp CTGGGGACCCTTGGGGAGGTGTGGGCATTTGCTGAGTaGGGCTGTCATTTGCTAGACAGGCGCTTGGCGAAG +
Preference number: 6 (lower is better)
Translates to: LGTLGEVWAFAE*GCHLLDRRLAK
Trigger: CTTCGCCAAGCGCCTGTCTAGCAAATGACAGCCCAACTCAGCAAATGCCCACACCTCCCCAAGGGTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474642.1
CDS TCA 72 bp GCGCTGATAGATTGTTGGCAAACAGATAGAGTGTCATaGGGCGGCCAAGGTCACGGAAGGCATGCGGGTGCA +
Preference number: 6 (lower is better)
Translates to: ALIDCWQTDRVS*GGQGHGRHAGA
Trigger: TGCACCCGCATGCCTTCCGTGACCTTGGCCGCCTCATGACACTCTATCTGTTTGCCAACAATCTATCAGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000043402.8
ENST00000416372.5
ENST00000425986.1
CDS TCA 72 bp CAGCAGCCGGCTCCCAATGCCAGATGCTCACAACGGTaGAACTGGTGTGTGGTAGATGCGATCTCTCTGTAC +
Preference number: 6 (lower is better)
Translates to: QQPAPNARCSQR*NWCVVDAISLY
Trigger: GTACAGAGAGATCGCATCTACCACACACCAGTTTCACCGTTGTGAGCATCTGGCATTGGGAGCCGGCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474642.1
CDS GCA 72 bp CAGATGCTCACAACGGTGAAACTGGTGTGTGGTAGATaGGATCTCTCTGTACTGTCTTCTCAATTTTTCAGC +
Preference number: 6 (lower is better)
Translates to: QMLTTVKLVCGR*DLSVLSSQFFS
Trigger: GCTGAAAAATTGAGAAGACAGTACAGAGAGATCGCATCTACCACACACCAGTTTCACCGTTGTGAGCATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474642.1