Pregenerated sensors for RTN4IP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000130347Ensembl transcript IDs: ENST00000369063.8
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCAAAGTGGCAAGCTTTGGGCTCCATTGGAAGGCTGCAATTTCCATaGAAAAGCCCTCAGAGAAGCATGTTTCAATTGCCGAAACAGGCC | + |
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Preference number: 1 (lower is better) Translates to: SKWQALGSIGRLQFP*KSPQRSMFQLPKQA Trigger: GGCCTGTTTCGGCAATTGAAACATGCTTCTCTGAGGGCTTTTCCATGGAAATTGCAGCCTTCCAATGGAGCCCAAAGCTTGCCACTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| 3UTR GCA 90 bp | GGCTGCAATTTCCATGGAAAAGCCCTCAGAGAAGCATGTTTCAATTaGCGAAACAGGCCTAATCCTTATGCAAGATGTAAGGGTTTTAAA | + |
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Preference number: 1 (lower is better) Translates to: GCNFHGKALREACFN*RNRPNPYARCKGFK Trigger: TTTAAAACCCTTACATCTTGCATAAGGATTAGGCCTGTTTCGGCAATTGAAACATGCTTCTCTGAGGGCTTTTCCATGGAAATTGCAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCTCAGAGAAGCATGTTTCAATTGCCGAAACAGGCCTAATCCTTATGCAAGAGTAATCCCAGAACTTTaGGAGACTGACATGGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: ALREACFNCRNRPNPYARVIPEL*ETDMVD Trigger: ATCCACCATGTCAGTCTCCCAAAGTTCTGGGATTAC...TCTTGCATAAGGATTAGGCCTGTTTCGGCAATTGAAACATGCTTCTCTGAGGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| 3UTR-3UTR CCA 90 bp | CCAAACGAGTGTCTAACAGGAATAAACCAAGCAGAAATCTCAAAACAGGTCTACCAAAGTGGCAAGCTTTaGGCTCCATTGGAAGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: PNECLTGINQAEISKQVYQSGKL*APLEGC Trigger: GCAGCCTTCCAATGGAGCCCAAAGCTTGCCACTTTG...GTAGACCTGTTTTGAGATTTCTGCTTGGTTTATTCCTGTTAGACACTCGTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| 3UTR CAA 90 bp | TATCTCTTCATGCCAACATCCATCTATACACTGAAAGTTTTAGTATaGTACATTAAGACGATCAGGCCCAGCAGGGTGGTTCACGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: YLFMPTSIYTLKVLV*YIKTIRPSRVVHAC Trigger: ACAGGCGTGAACCACCCTGCTGGGCCTGATCGTCTTAATGTACAATACTAAAACTTTCAGTGTATAGATGGATGTTGGCATGAAGAGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| 3UTR-3UTR GCA 90 bp | CCAAACGAGTGTCTAACAGGAATAAACCAAGCAGAAATCTCAAAACAGGTCTACGCTCCATTGGAAGGCTaGAATTTCCATGGAAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: PNECLTGINQAEISKQVYAPLEG*NFHGKA Trigger: GGCTTTTCCATGGAAATTGCAGCCTTCCAATGGAGC...GTAGACCTGTTTTGAGATTTCTGCTTGGTTTATTCCTGTTAGACACTCGTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCAGAAATCTCAAAACAGGTCTACATCAAAAGTTACAAGCAAGCATATCAGGGTAGTCCTACCTACTTaGGAGGCTGAAGCAGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: KQKSQNRSTSKVTSKHIRVVLPT*EAEAGE Trigger: TTCTCCTGCTTCAGCCTCTCAAGTAGGTAGGACTAC...CCTGATATGCTTGCTTGTAACTTTTGATGTAGACCTGTTTTGAGATTTCTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCCTACATCTAACATACATGCTACCAAACGAGTGTCTAACAGGAATAAACCAAGGCTGCAATTTCCATaGAAAAGCCCTCAGAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: KPTSNIHATKRVSNRNKPRLQFP*KSPQRS Trigger: GCTTCTCTGAGGGCTTTTCCATGGAAATTGCAGCCT...TGGTTTATTCCTGTTAGACACTCGTTTGGTAGCATGTATGTTAGATGTAGGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| 3UTR-3UTR CCA 90 bp | CCTACATCTAACATACATGCTACCAAACGAGTGTCTAACAGGAATAAACCAAGCCATTTGACATCAAAGTaGCAAGCTTTGGGCTCCATT | + |
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Preference number: 2 (lower is better) Translates to: PTSNIHATKRVSNRNKPSHLTSK*QALGSI Trigger: AATGGAGCCCAAAGCTTGCCACTTTGATGTCAAATG...GCTTGGTTTATTCCTGTTAGACACTCGTTTGGTAGCATGTATGTTAGATGTAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| 3UTR-3UTR CCA 90 bp | TGTCTAACAGGAATAAACCAAGCAGAAATCTCAAAACAGGTCTACATCAAAAGTAGCTTTGGGCTCCATTaGAAGGCTGCAATTTCCATG | + |
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Preference number: 2 (lower is better) Translates to: CLTGINQAEISKQVYIKSSFGLH*KAAISM Trigger: CATGGAAATTGCAGCCTTCCAATGGAGCCCAAAGCT...ACTTTTGATGTAGACCTGTTTTGAGATTTCTGCTTGGTTTATTCCTGTTAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| 3UTR-3UTR TCA 90 bp | CCAAACGAGTGTCTAACAGGAATAAACCAAGCAGAAATCTCAAAACAGGTCTACACTTCGAATTTCTACTaGCTACAGACAAATCCAAGT | + |
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Preference number: 2 (lower is better) Translates to: PNECLTGINQAEISKQVYTSNFY*LQTNPS Trigger: ACTTGGATTTGTCTGTAGTCAGTAGAAATTCGAAGT...GTAGACCTGTTTTGAGATTTCTGCTTGGTTTATTCCTGTTAGACACTCGTTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| 3UTR-3UTR TCA 90 bp | CAAAACAGGTCTACATCAAAAGTTACAAGCAAGCATATCAGGTGCAATACTGAGCACACTGCAATGGGTTaGTTGGAGAGATATCTAAAT | + |
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Preference number: 2 (lower is better) Translates to: QNRSTSKVTSKHIRCNTEHTAMG*LERYLN Trigger: ATTTAGATATCTCTCCAATCAACCCATTGCAGTGTG...CTCAGTATTGCACCTGATATGCTTGCTTGTAACTTTTGATGTAGACCTGTTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| 3UTR-3UTR GCA 90 bp | AAGCAGAAATCTCAAAACAGGTCTACATCAAAAGTTACAAGCAAGCATATCAGGTGGCAGTTAGAAAGCTaGTCAGTGATGAATTCAAGA | + |
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Preference number: 2 (lower is better) Translates to: KQKSQNRSTSKVTSKHIRWQLES*SVMNSR Trigger: TCTTGAATTCATCACTGAGCAGCTTTCTAACTGCCA...CCTGATATGCTTGCTTGTAACTTTTGATGTAGACCTGTTTTGAGATTTCTGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| 3UTR-3UTR GCA 90 bp | CATCAAAAGTTACAAGCAAGCATATCAGGTGCAATACTGAGGATGAGTATATTAGAAGCATGTTTCAATTaGCGAAACAGGCCTAATCCT | + |
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Preference number: 2 (lower is better) Translates to: HQKLQASISGAILRMSILEACFN*RNRPNP Trigger: AGGATTAGGCCTGTTTCGGCAATTGAAACATGCTTC...TAATATACTCATCCTCAGTATTGCACCTGATATGCTTGCTTGTAACTTTTGATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| 3UTR-3UTR GCA 90 bp | CATCAAAAGTTACAAGCAAGCATATCAGGTGCAATACTGAGGATGAGTATATTAAATGAATATTCGAAGTaGACACTGCAATGGGTTGAT | + |
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Preference number: 2 (lower is better) Translates to: HQKLQASISGAILRMSILNEYSK*TLQWVD Trigger: ATCAACCCATTGCAGTGTGCACTTCGAATATTCATT...TAATATACTCATCCTCAGTATTGCACCTGATATGCTTGCTTGTAACTTTTGATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| 3UTR GCA 72 bp | CATCAAAGTGGCAAGCTTTGGGCTCCATTGGAAGGCTaGAATTTCCATGGAAAAGCCCTCAGAGAAGCATGT | + |
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Preference number: 3 (lower is better) Translates to: HQSGKLWAPLEG*NFHGKALREAC Trigger: ACATGCTTCTCTGAGGGCTTTTCCATGGAAATTGCAGCCTTCCAATGGAGCCCAAAGCTTGCCACTTTGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| 3UTR CCA 72 bp | CAAGCTTTGGGCTCCATTGGAAGGCTGCAATTTCCATaGAAAAGCCCTCAGAGAAGCATGTTTCAATTGCCG | + |
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Preference number: 3 (lower is better) Translates to: QALGSIGRLQFP*KSPQRSMFQLP Trigger: CGGCAATTGAAACATGCTTCTCTGAGGGCTTTTCCATGGAAATTGCAGCCTTCCAATGGAGCCCAAAGCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| 3UTR CCA 72 bp | ACATTTGACATCAAAGTGGCAAGCTTTGGGCTCCATTaGAAGGCTGCAATTTCCATGGAAAAGCCCTCAGAG | + |
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Preference number: 3 (lower is better) Translates to: TFDIKVASFGLH*KAAISMEKPSE Trigger: CTCTGAGGGCTTTTCCATGGAAATTGCAGCCTTCCAATGGAGCCCAAAGCTTGCCACTTTGATGTCAAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| 3UTR-3UTR CAA 90 bp | CCTACATCTAACATACATGCTACCAAACGAGTGTCTAACAGGAATAAACCAAGCTCAAAGTGGCAAGCTTaGGGCTCCATTGGAAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: PTSNIHATKRVSNRNKPSSKWQA*GSIGRL Trigger: CAGCCTTCCAATGGAGCCCAAAGCTTGCCACTTTGA...GCTTGGTTTATTCCTGTTAGACACTCGTTTGGTAGCATGTATGTTAGATGTAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| 3UTR GCA 72 bp | TTCCATGGAAAAGCCCTCAGAGAAGCATGTTTCAATTaGCGAAACAGGCCTAATCCTTATGCAAGATGTAAG | + |
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Preference number: 3 (lower is better) Translates to: FHGKALREACFN*RNRPNPYARCK Trigger: CTTACATCTTGCATAAGGATTAGGCCTGTTTCGGCAATTGAAACATGCTTCTCTGAGGGCTTTTCCATGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| 3UTR-3UTR CAA 90 bp | AAGCAGAAATCTCAAAACAGGTCTACATCAAAAGTTACAAGCAAGCATATCAGGAAGCTTTGGGCTCCATaGGAAGGCTGCAATTTCCAT | + |
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Preference number: 3 (lower is better) Translates to: KQKSQNRSTSKVTSKHIRKLWAP*EGCNFH Trigger: ATGGAAATTGCAGCCTTCCAATGGAGCCCAAAGCTT...CCTGATATGCTTGCTTGTAACTTTTGATGTAGACCTGTTTTGAGATTTCTGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| CDS-3UTR GCA 90 bp | AGCTTTGGGCTCCATTGGAAGGCTGCAATTTCCATGGAAAAGCCCTCAGAGAAGGGCCCGGAATCTCCTTaGCTGCCCGCTCTCCTTAGC | + |
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Preference number: 4 (lower is better) Translates to: SFGLHWKAAISMEKPSEKGPESP*LPALLS Trigger: GCTAAGGAGAGCGGGCAGGCAAGGAGATTCCGGGCC...CTTCTCTGAGGGCTTTTCCATGGAAATTGCAGCCTTCCAATGGAGCCCAAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| CDS-3UTR GCA 90 bp | CCTACATCTAACATACATGCTACCAAACGAGTGTCTAACAGGAATAAACCAAGCAACCCCCTAGATCCCTaGCCTGTCCTGGGAGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: PTSNIHATKRVSNRNKPSNPLDP*PVLGAL Trigger: GAGGGCTCCCAGGACAGGGCAGGGATCTAGGGGGTT...GCTTGGTTTATTCCTGTTAGACACTCGTTTGGTAGCATGTATGTTAGATGTAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| CDS-3UTR GCA 90 bp | ACATCTAACATACATGCTACCAAACGAGTGTCTAACAGGAATAAACCAAGCAGACGGAATCTCCTTGCCTaGCCGCTCTCCTTAGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: TSNIHATKRVSNRNKPSRRNLLA*PLSLAA Trigger: GGCGGCTAAGGAGAGCGGGCAGGCAAGGAGATTCCG...TCTGCTTGGTTTATTCCTGTTAGACACTCGTTTGGTAGCATGTATGTTAGATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| CDS-3UTR CCA 90 bp | TGTCTAACAGGAATAAACCAAGCAGAAATCTCAAAACAGGTCTACATCAAAAGTCTGCCGCCGCGACCCTaGCCCGGAATCTCCTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: CLTGINQAEISKQVYIKSLPPRP*PGISLP Trigger: AGGCAAGGAGATTCCGGGCCAGGGTCGCGGCGGCAG...ACTTTTGATGTAGACCTGTTTTGAGATTTCTGCTTGGTTTATTCCTGTTAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| CDS-3UTR CCA 90 bp | AAGCAGAAATCTCAAAACAGGTCTACATCAAAAGTTACAAGCAAGCATATCAGGATCCCTGCCCTGTCCTaGGAGCCCTCGGCGGGACAA | + |
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Preference number: 4 (lower is better) Translates to: KQKSQNRSTSKVTSKHIRIPALS*EPSAGQ Trigger: TTGTCCCGCCGAGGGCTCCCAGGACAGGGCAGGGAT...CCTGATATGCTTGCTTGTAACTTTTGATGTAGACCTGTTTTGAGATTTCTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| CDS-3UTR CCA 90 bp | AGCTTTGGGCTCCATTGGAAGGCTGCAATTTCCATGGAAAAGCCCTCAGAGAAGAGCTTTGGGCTCCATTaGAAGGCTGCAATTTCCATG | + |
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Preference number: 4 (lower is better) Translates to: SFGLHWKAAISMEKPSEKSFGLH*KAAISM Trigger: CATGGAAATTGCAGCCTTCCAATGGAGCCCAAAGCT...CTTCTCTGAGGGCTTTTCCATGGAAATTGCAGCCTTCCAATGGAGCCCAAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| CDS-3UTR CCA 90 bp | GCCCTCAGAGAAGCATGTTTCAATTGCCGAAACAGGCCTAATCCTTATGCAAGACAAAGTGGCAAGCTTTaGGCTCCATTGGAAGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: ALREACFNCRNRPNPYARQSGKL*APLEGC Trigger: GCAGCCTTCCAATGGAGCCCAAAGCTTGCCACTTTG...TCTTGCATAAGGATTAGGCCTGTTTCGGCAATTGAAACATGCTTCTCTGAGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| CDS-3UTR GCA 90 bp | CATCAAAAGTTACAAGCAAGCATATCAGGTGCAATACTGAGGATGAGTATATTAAGAGAATCGAACGCTTaGCGACTGCCGCCGCGACCC | + |
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Preference number: 4 (lower is better) Translates to: HQKLQASISGAILRMSILRESNA*RLPPRP Trigger: GGGTCGCGGCGGCAGTCGGCAAGCGTTCGATTCTCT...TAATATACTCATCCTCAGTATTGCACCTGATATGCTTGCTTGTAACTTTTGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| CDS-3UTR GCA 90 bp | AGGCTGCAATTTCCATGGAAAAGCCCTCAGAGAAGCATGTTTCAATTGCCGAAAGCATTAAAAAGCAGGTaGGCAAACCCCCTAGATCCC | + |
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Preference number: 4 (lower is better) Translates to: RLQFPWKSPQRSMFQLPKALKSR*ANPLDP Trigger: GGGATCTAGGGGGTTTGCGCACCTGCTTTTTAATGC...TTTCGGCAATTGAAACATGCTTCTCTGAGGGCTTTTCCATGGAAATTGCAGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| CDS-3UTR CCA 90 bp | AGGCTGCAATTTCCATGGAAAAGCCCTCAGAGAAGCATGTTTCAATTGCCGAAAGTAATCCCAGAACTTTaGGAGACTGACATGGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: RLQFPWKSPQRSMFQLPKVIPEL*ETDMVD Trigger: ATCCACCATGTCAGTCTCCCAAAGTTCTGGGATTAC...TTTCGGCAATTGAAACATGCTTCTCTGAGGGCTTTTCCATGGAAATTGCAGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| CDS-3UTR TCA 90 bp | AAGCCTACATCTAACATACATGCTACCAAACGAGTGTCTAACAGGAATAAACCAGTAGTCCTACCTACTTaGGAGGCTGAAGCAGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: KPTSNIHATKRVSNRNKPVVLPT*EAEAGE Trigger: TTCTCCTGCTTCAGCCTCTCAAGTAGGTAGGACTAC...TGGTTTATTCCTGTTAGACACTCGTTTGGTAGCATGTATGTTAGATGTAGGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| CDS-3UTR GCA 90 bp | CCTACATCTAACATACATGCTACCAAACGAGTGTCTAACAGGAATAAACCAAGCATCTTGGGAGCAAACTaGTGTCACATGAGCATCCCA | + |
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Preference number: 4 (lower is better) Translates to: PTSNIHATKRVSNRNKPSILGAN*CHMSIP Trigger: TGGGATGCTCATGTGACAGCAGTTTGCTCCCAAGAT...GCTTGGTTTATTCCTGTTAGACACTCGTTTGGTAGCATGTATGTTAGATGTAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| CDS-3UTR TCA 90 bp | GCCCTCAGAGAAGCATGTTTCAATTGCCGAAACAGGCCTAATCCTTATGCAAGAACTTCGAATTTCTACTaGCTACAGACAAATCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: ALREACFNCRNRPNPYARTSNFY*LQTNPS Trigger: ACTTGGATTTGTCTGTAGTCAGTAGAAATTCGAAGT...TCTTGCATAAGGATTAGGCCTGTTTCGGCAATTGAAACATGCTTCTCTGAGGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| CDS-3UTR GCA 90 bp | AATTTCCATGGAAAAGCCCTCAGAGAAGCATGTTTCAATTGCCGAAACAGGCCTTGGCAGTTAGAAAGCTaGTCAGTGATGAATTCAAGA | + |
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Preference number: 4 (lower is better) Translates to: NFHGKALREACFNCRNRPWQLES*SVMNSR Trigger: TCTTGAATTCATCACTGAGCAGCTTTCTAACTGCCA...AGGCCTGTTTCGGCAATTGAAACATGCTTCTCTGAGGGCTTTTCCATGGAAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| CDS-3UTR GCA 90 bp | AAGCCTACATCTAACATACATGCTACCAAACGAGTGTCTAACAGGAATAAACCAGCTCCATTGGAAGGCTaGAATTTCCATGGAAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: KPTSNIHATKRVSNRNKPAPLEG*NFHGKA Trigger: GGCTTTTCCATGGAAATTGCAGCCTTCCAATGGAGC...TGGTTTATTCCTGTTAGACACTCGTTTGGTAGCATGTATGTTAGATGTAGGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| CDS-3UTR GCA 90 bp | CCTACATCTAACATACATGCTACCAAACGAGTGTCTAACAGGAATAAACCAAGCATTCGAAGTGCACACTaGAATGGGTTGATTGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: PTSNIHATKRVSNRNKPSIRSAH*NGLIGE Trigger: CTCTCCAATCAACCCATTGCAGTGTGCACTTCGAAT...GCTTGGTTTATTCCTGTTAGACACTCGTTTGGTAGCATGTATGTTAGATGTAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| CDS-3UTR TCA 90 bp | GTTTCAATTGCCGAAACAGGCCTAATCCTTATGCAAGATGTAAGGGTTTTAAAACCTCATCTCCAGGCTTaGAGTATTTCACATCAAGCC | + |
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Preference number: 4 (lower is better) Translates to: VSIAETGLILMQDVRVLKPHLQA*SISHQA Trigger: GGCTTGATGTGAAATACTTCAAGCCTGGAGATGAGG...TTTTAAAACCCTTACATCTTGCATAAGGATTAGGCCTGTTTCGGCAATTGAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| CDS-3UTR TCA 90 bp | TGTCTAACAGGAATAAACCAAGCAGAAATCTCAAAACAGGTCTACATCAAAAGTCCTTTGAACCTACAGTaGCTCCTGTCTGCAACATGC | + |
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Preference number: 4 (lower is better) Translates to: CLTGINQAEISKQVYIKSPLNLQ*LLSATC Trigger: GCATGTTGCAGACAGGAGTCACTGTAGGTTCAAAGG...ACTTTTGATGTAGACCTGTTTTGAGATTTCTGCTTGGTTTATTCCTGTTAGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| CDS-3UTR CCA 90 bp | CAAAACAGGTCTACATCAAAAGTTACAAGCAAGCATATCAGGTGCAATACTGAGTCCTTACAAGTTCACTaGCATCTTGGGAGCAAACTG | + |
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Preference number: 4 (lower is better) Translates to: QNRSTSKVTSKHIRCNTESLQVH*HLGSKL Trigger: CAGTTTGCTCCCAAGATGCCAGTGAACTTGTAAGGA...CTCAGTATTGCACCTGATATGCTTGCTTGTAACTTTTGATGTAGACCTGTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| CDS-3UTR CCA 90 bp | CCAAACGAGTGTCTAACAGGAATAAACCAAGCAGAAATCTCAAAACAGGTCTACAAGTGCACACTGCAATaGGTTGATTGGAGAGATATC | + |
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Preference number: 4 (lower is better) Translates to: PNECLTGINQAEISKQVYKCTLQ*VDWRDI Trigger: GATATCTCTCCAATCAACCCATTGCAGTGTGCACTT...GTAGACCTGTTTTGAGATTTCTGCTTGGTTTATTCCTGTTAGACACTCGTTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| CDS-3UTR TCA 90 bp | ACATCTAACATACATGCTACCAAACGAGTGTCTAACAGGAATAAACCAAGCAGATCCGCTCTTCGCATATaGAATGCTCGAATTAACGTT | + |
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Preference number: 4 (lower is better) Translates to: TSNIHATKRVSNRNKPSRSALRI*NARINV Trigger: AACGTTAATTCGAGCATTTCATATGCGAAGAGCGGA...TCTGCTTGGTTTATTCCTGTTAGACACTCGTTTGGTAGCATGTATGTTAGATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| CDS-3UTR GCA 90 bp | CCAAACGAGTGTCTAACAGGAATAAACCAAGCAGAAATCTCAAAACAGGTCTACAGCAAGCATATCAGGTaGAATACTGAGGATGAGTAT | + |
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Preference number: 4 (lower is better) Translates to: PNECLTGINQAEISKQVYSKHIR*NTEDEY Trigger: ATACTCATCCTCAGTATTGCACCTGATATGCTTGCT...GTAGACCTGTTTTGAGATTTCTGCTTGGTTTATTCCTGTTAGACACTCGTTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| CDS-3UTR CCA 90 bp | TGTCTAACAGGAATAAACCAAGCAGAAATCTCAAAACAGGTCTACATCAAAAGTAGGCTGCAATTTCCATaGAAAAGCCCTCAGAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: CLTGINQAEISKQVYIKSRLQFP*KSPQRS Trigger: GCTTCTCTGAGGGCTTTTCCATGGAAATTGCAGCCT...ACTTTTGATGTAGACCTGTTTTGAGATTTCTGCTTGGTTTATTCCTGTTAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| CDS-3UTR TCA 90 bp | ACATCTAACATACATGCTACCAAACGAGTGTCTAACAGGAATAAACCAAGCAGACACACTGCAATGGGTTaGTTGGAGAGATATCTAAAT | + |
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Preference number: 4 (lower is better) Translates to: TSNIHATKRVSNRNKPSRHTAMG*LERYLN Trigger: ATTTAGATATCTCTCCAATCAACCCATTGCAGTGTG...TCTGCTTGGTTTATTCCTGTTAGACACTCGTTTGGTAGCATGTATGTTAGATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| CDS-3UTR TCA 90 bp | CCAAACGAGTGTCTAACAGGAATAAACCAAGCAGAAATCTCAAAACAGGTCTACAACACTTACCGTAAATaGATATTCGAAGTGCACACT | + |
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Preference number: 4 (lower is better) Translates to: PNECLTGINQAEISKQVYNTYRK*IFEVHT Trigger: AGTGTGCACTTCGAATATTCATTTACGGTAAGTGTT...GTAGACCTGTTTTGAGATTTCTGCTTGGTTTATTCCTGTTAGACACTCGTTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| CDS-3UTR GCA 90 bp | TGTCTAACAGGAATAAACCAAGCAGAAATCTCAAAACAGGTCTACATCAAAAGTGAAGCATGTTTCAATTaGCGAAACAGGCCTAATCCT | + |
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Preference number: 4 (lower is better) Translates to: CLTGINQAEISKQVYIKSEACFN*RNRPNP Trigger: AGGATTAGGCCTGTTTCGGCAATTGAAACATGCTTC...ACTTTTGATGTAGACCTGTTTTGAGATTTCTGCTTGGTTTATTCCTGTTAGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| CDS-3UTR GCA 90 bp | AAGCCTACATCTAACATACATGCTACCAAACGAGTGTCTAACAGGAATAAACCAAATGAATATTCGAAGTaGACACTGCAATGGGTTGAT | + |
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Preference number: 4 (lower is better) Translates to: KPTSNIHATKRVSNRNKPNEYSK*TLQWVD Trigger: ATCAACCCATTGCAGTGTGCACTTCGAATATTCATT...TGGTTTATTCCTGTTAGACACTCGTTTGGTAGCATGTATGTTAGATGTAGGCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| CDS-3UTR CCA 90 bp | TGTCTAACAGGAATAAACCAAGCAGAAATCTCAAAACAGGTCTACATCAAAAGTCATTTGACATCAAAGTaGCAAGCTTTGGGCTCCATT | + |
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Preference number: 4 (lower is better) Translates to: CLTGINQAEISKQVYIKSHLTSK*QALGSI Trigger: AATGGAGCCCAAAGCTTGCCACTTTGATGTCAAATG...ACTTTTGATGTAGACCTGTTTTGAGATTTCTGCTTGGTTTATTCCTGTTAGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| CDS-3UTR CAA 90 bp | AGGCTGCAATTTCCATGGAAAAGCCCTCAGAGAAGCATGTTTCAATTGCCGAAACAGAGAATCGAACGCTaGCCGACTGCCGCCGCGACC | + |
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Preference number: 5 (lower is better) Translates to: RLQFPWKSPQRSMFQLPKQRIER*PTAAAT Trigger: GGTCGCGGCGGCAGTCGGCAAGCGTTCGATTCTCTG...TTTCGGCAATTGAAACATGCTTCTCTGAGGGCTTTTCCATGGAAATTGCAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| CDS-3UTR CAA 90 bp | CAAAACAGGTCTACATCAAAAGTTACAAGCAAGCATATCAGGTGCAATACTGAGTCAAAGTGGCAAGCTTaGGGCTCCATTGGAAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: QNRSTSKVTSKHIRCNTESKWQA*GSIGRL Trigger: CAGCCTTCCAATGGAGCCCAAAGCTTGCCACTTTGA...CTCAGTATTGCACCTGATATGCTTGCTTGTAACTTTTGATGTAGACCTGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| CDS-3UTR CAA 90 bp | CCAAACGAGTGTCTAACAGGAATAAACCAAGCAGAAATCTCAAAACAGGTCTACACCTCATCTCCAGGCTaGAAGTATTTCACATCAAGC | + |
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Preference number: 5 (lower is better) Translates to: PNECLTGINQAEISKQVYTSSPG*KYFTSS Trigger: GCTTGATGTGAAATACTTCAAGCCTGGAGATGAGGT...GTAGACCTGTTTTGAGATTTCTGCTTGGTTTATTCCTGTTAGACACTCGTTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| CDS-3UTR CAA 90 bp | AAGCCTACATCTAACATACATGCTACCAAACGAGTGTCTAACAGGAATAAACCATTCAGGCCACCAACTTaGTTTATAGCAGACCAGGCT | + |
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Preference number: 5 (lower is better) Translates to: KPTSNIHATKRVSNRNKPFRPPT*FIADQA Trigger: AGCCTGGTCTGCTATAAACAAAGTTGGTGGCCTGAA...TGGTTTATTCCTGTTAGACACTCGTTTGGTAGCATGTATGTTAGATGTAGGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| CDS TCA 90 bp | GAAACTGAAAGAAGAATACGGAACTGTTATTCCGCTCTTCGCATATaGAATGCTCGAATTAACGTTCCAGTCAGTATTCTGTCCATTCTC | + |
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Preference number: 5 (lower is better) Translates to: ETERRIRNCYSALRI*NARINVPVSILSIL Trigger: GAGAATGGACAGAATACTGACTGGAACGTTAATTCGAGCATTTCATATGCGAAGAGCGGAATAACAGTTCCGTATTCTTCTTTCAGTTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| CDS-3UTR CAA 90 bp | TGTCTAACAGGAATAAACCAAGCAGAAATCTCAAAACAGGTCTACATCAAAAGTAAGCTTTGGGCTCCATaGGAAGGCTGCAATTTCCAT | + |
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Preference number: 5 (lower is better) Translates to: CLTGINQAEISKQVYIKSKLWAP*EGCNFH Trigger: ATGGAAATTGCAGCCTTCCAATGGAGCCCAAAGCTT...ACTTTTGATGTAGACCTGTTTTGAGATTTCTGCTTGGTTTATTCCTGTTAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| CDS-3UTR CAA 90 bp | CATCAAAAGTTACAAGCAAGCATATCAGGTGCAATACTGAGGATGAGTATATTAGCACACTGCAATGGGTaGATTGGAGAGATATCTAAA | + |
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Preference number: 5 (lower is better) Translates to: HQKLQASISGAILRMSILAHCNG*IGEISK Trigger: TTTAGATATCTCTCCAATCAACCCATTGCAGTGTGC...TAATATACTCATCCTCAGTATTGCACCTGATATGCTTGCTTGTAACTTTTGATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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| CDS TCA 72 bp | AGAAGAATACGGAACTGTTATTCCGCTCTTCGCATATaGAATGCTCGAATTAACGTTCCAGTCAGTATTCTG | + |
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Preference number: 6 (lower is better) Translates to: RRIRNCYSALRI*NARINVPVSIL Trigger: CAGAATACTGACTGGAACGTTAATTCGAGCATTTCATATGCGAAGAGCGGAATAACAGTTCCGTATTCTTCT 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369063.8 |
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