Pregenerated sensors for RTN3 (Homo sapiens)
Ensembl gene IDs: ENSG00000133318Ensembl transcript IDs: ENST00000338850.5, ENST00000339997.8, ENST00000377819.10, ENST00000538995.1, ENST00000540798.5, ENST00000542238.5, ENST00000543123.1, ENST00000543552.5, ENST00000545432.5
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | ATTTCTCCCAATGCAGAGCTCTGCCAGTCCATTTCATCTTTCAGGTaGTCATCAGGTAAAACCACTTTCACTGTGGCCACTCCAGAACCC | + |
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Preference number: 5 (lower is better) Translates to: ISPNAELCQSISSFR*SSGKTTFTVATPEP Trigger: GGGTTCTGGAGTGGCCACAGTGAAAGTGGTTTTACCTGATGACCACCTGAAAGATGAAATGGACTGGCAGAGCTCTGCATTGGGAGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000339997.8 ENST00000377819.10 ENST00000540798.5 |
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| CDS GCA 90 bp | GTCATCAGACTCACCAGAACTATCAGCTTCTGTGATTTCTCCCAATaGAGAGCTCTGCCAGTCCATTTCATCTTTCAGGTGGTCATCAGG | + |
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Preference number: 5 (lower is better) Translates to: VIRLTRTISFCDFSQ*RALPVHFIFQVVIR Trigger: CCTGATGACCACCTGAAAGATGAAATGGACTGGCAGAGCTCTGCATTGGGAGAAATCACAGAAGCTGATAGTTCTGGTGAGTCTGATGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339997.8 ENST00000377819.10 ENST00000540798.5 |
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| CDS TCA 90 bp | CTTTTAATCTTAATTCTCAGATTAAAGGAGAGTAAGGAGACAGGATaGGGCACAAAGTGTGATCCTAGACTGGACTCCGCACAGGAGGAG | + |
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Preference number: 5 (lower is better) Translates to: LLILILRLKESKETG*GTKCDPRLDSAQEE Trigger: CTCCTCCTGTGCGGAGTCCAGTCTAGGATCACACTTTGTGCCTCATCCTGTCTCCTTACTCTCCTTTAATCTGAGAATTAAGATTAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542238.5 |
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| CDS GCA 90 bp | TCATATGATCTCTGTGGCCAAGATTCTGGAGCAAATGTGAAAGTTTaGTTCAGTACTTCTTCAGAAGGCAATTCTGCGTCACGCTGTGCA | + |
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Preference number: 5 (lower is better) Translates to: SYDLCGQDSGANVKV*FSTSSEGNSASRCA Trigger: TGCACAGCGTGACGCAGAATTGCCTTCTGAAGAAGTACTGAAGCAAACTTTCACATTTGCTCCAGAATCTTGGCCACAGAGATCATATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339997.8 ENST00000377819.10 ENST00000540798.5 |
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| CDS CCA 90 bp | GTGAGCTGTTCTTGTTCTAAGTCAAGAGATGCTACTGGAGTACCTTaGGTAGGGAAAACACCTAGAGGCTCACTTCCATTTGTTTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: VSCSCSKSRDATGVP*VGKTPRGSLPFVSL Trigger: CAAAGAAACAAATGGAAGTGAGCCTCTAGGTGTTTTCCCTACCCAAGGTACTCCAGTAGCATCTCTTGACTTAGAACAAGAACAGCTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000339997.8 ENST00000377819.10 ENST00000540798.5 |
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| CDS TCA 90 bp | AATAGCATTTTCTTGCTGGAGAGATGCTTCTGCCCAATCACCTGTTaGTTTAGTGATGGGAGTGCTCCCATCAATAGAACATACAGGAGT | + |
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Preference number: 5 (lower is better) Translates to: NSIFLLERCFCPITC*FSDGSAPINRTYRS Trigger: ACTCCTGTATGTTCTATTGATGGGAGCACTCCCATCACTAAATCAACAGGTGATTGGGCAGAAGCATCTCTCCAGCAAGAAAATGCTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000339997.8 ENST00000377819.10 ENST00000540798.5 |
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| CDS TCA 90 bp | CTAGGATGTCATATGATCTCTGTGGCCAAGATTCTGGAGCAAATGTaGAAGTTTGCTTCAGTACTTCTTCAGAAGGCAATTCTGCGTCAC | + |
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Preference number: 5 (lower is better) Translates to: LGCHMISVAKILEQM*KFASVLLQKAILRH Trigger: GTGACGCAGAATTGCCTTCTGAAGAAGTACTGAAGCAAACTTTCACATTTGCTCCAGAATCTTGGCCACAGAGATCATATGACATCCTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339997.8 ENST00000377819.10 ENST00000540798.5 |
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| CDS GCA 90 bp | ACTTGGGGAACCAGATCCCAAGTCAGTATTTCGTTAGTAAAGTTATaGATATCATTCACGCATCTGGACACCTCTTCCAGTGCTGCATTT | + |
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Preference number: 5 (lower is better) Translates to: TWGTRSQVSISLVKL*ISFTHLDTSSSAAF Trigger: AAATGCAGCACTGGAAGAGGTGTCCAGATGCGTGAATGATATGCATAACTTTACTAACGAAATACTGACTTGGGATCTGGTTCCCCAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000339997.8 ENST00000377819.10 ENST00000540798.5 |
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| CDS CCA 90 bp | GAAACAGCATCTACCCTAGTAGTTTCTCTGATAGTGATGGGCTTCTaGGAAATCCCAAGATCAGATCCATTCTTGACATTACGTTCTAGG | + |
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Preference number: 5 (lower is better) Translates to: ETASTLVVSLIVMGF*EIPRSDPFLTLRSR Trigger: CCTAGAACGTAATGTCAAGAATGGATCTGATCTTGGGATTTCCCAGAAGCCCATCACTATCAGAGAAACTACTAGGGTAGATGCTGTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339997.8 ENST00000377819.10 ENST00000540798.5 |
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| CDS GCA 90 bp | TCAGGTGGAGATCCAGGTAATTCTGCAAGTGTGTCATCCTGTTTCTaGATATTGCCTTGCACACCTTTGATACTGAATTCTTTTGTGGAA | + |
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Preference number: 5 (lower is better) Translates to: SGGDPGNSASVSSCF*ILPCTPLILNSFVE Trigger: TTCCACAAAAGAATTCAGTATCAAAGGTGTGCAAGGCAATATGCAGAAACAGGATGACACACTTGCAGAATTACCTGGATCTCCACCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000339997.8 ENST00000377819.10 ENST00000540798.5 |
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| CDS CCA 90 bp | TTCAAAGAGTCAGGTACAGGTTTTCCAGTAATAGCATTTTCTTGCTaGAGAGATGCTTCTGCCCAATCACCTGTTGATTTAGTGATGGGA | + |
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Preference number: 5 (lower is better) Translates to: FKESGTGFPVIAFSC*RDASAQSPVDLVMG Trigger: TCCCATCACTAAATCAACAGGTGATTGGGCAGAAGCATCTCTCCAGCAAGAAAATGCTATTACTGGAAAACCTGTACCTGACTCTTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000339997.8 ENST00000377819.10 ENST00000540798.5 |
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| CDS GCA 90 bp | GAATTCAAAGAGTCAGGTACAGGTTTTCCAGTAATAGCATTTTCTTaGTGGAGAGATGCTTCTGCCCAATCACCTGTTGATTTAGTGATG | + |
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Preference number: 5 (lower is better) Translates to: EFKESGTGFPVIAFS*WRDASAQSPVDLVM Trigger: CATCACTAAATCAACAGGTGATTGGGCAGAAGCATCTCTCCAGCAAGAAAATGCTATTACTGGAAAACCTGTACCTGACTCTTTGAATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000339997.8 ENST00000377819.10 ENST00000540798.5 |
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| CDS CCA 90 bp | CAAAGAATATGTATAAATGCCTTCTACCTTAGAGTACTCAGTAGGTaGTTTCTGGGCTGTCAGCAAAGTGAATCTGTCATCAGCATCCAA | + |
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Preference number: 5 (lower is better) Translates to: QRICINAFYLRVLSR*FLGCQQSESVISIQ Trigger: TTGGATGCTGATGACAGATTCACTTTGCTGACAGCCCAGAAACCACCTACTGAGTACTCTAAGGTAGAAGGCATTTATACATATTCTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000339997.8 ENST00000377819.10 ENST00000540798.5 ENST00000543552.5 ENST00000545432.5 |
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| CDS GCA 90 bp | TTGTCATTAGTCTCTGAAATGTCTTCGGATGATTCTTTATCAGTGTaGACAGACCAGCTACCAAAATCATCTGTGCTCTCCTTATATGAG | + |
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Preference number: 5 (lower is better) Translates to: LSLVSEMSSDDSLSV*TDQLPKSSVLSLYE Trigger: CTCATATAAGGAGAGCACAGATGATTTTGGTAGCTGGTCTGTGCACACTGATAAAGAATCATCCGAAGACATTTCAGAGACTAATGACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000339997.8 ENST00000377819.10 ENST00000540798.5 |
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| CDS GCA 90 bp | CCAGGTAATTCTGCAAGTGTGTCATCCTGTTTCTGCATATTGCCTTaGACACCTTTGATACTGAATTCTTTTGTGGAATTCAAAGAGTCA | + |
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Preference number: 5 (lower is better) Translates to: PGNSASVSSCFCILP*TPLILNSFVEFKES Trigger: TGACTCTTTGAATTCCACAAAAGAATTCAGTATCAAAGGTGTGCAAGGCAATATGCAGAAACAGGATGACACACTTGCAGAATTACCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000339997.8 ENST00000377819.10 ENST00000540798.5 |
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| CDS CCA 90 bp | GTTTTTGTGATGCAGTCAGAAGATTTATCGGTCTGTTGTTTCACTTaGGGAACCAGATCCCAAGTCAGTATTTCGTTAGTAAAGTTATGC | + |
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Preference number: 5 (lower is better) Translates to: VFVMQSEDLSVCCFT*GTRSQVSISLVKLC Trigger: GCATAACTTTACTAACGAAATACTGACTTGGGATCTGGTTCCCCAAGTGAAACAACAGACCGATAAATCTTCTGACTGCATCACAAAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000339997.8 ENST00000377819.10 ENST00000540798.5 |
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| CDS TCA 90 bp | AGTGTGCACAGACCAGCTACCAAAATCATCTGTGCTCTCCTTATATaGGTCTTTAAATTCTTTGTCAAATGCTGCTTTGTCAATAATTAC | + |
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Preference number: 5 (lower is better) Translates to: SVHRPATKIICALLI*VFKFFVKCCFVNNY Trigger: GTAATTATTGACAAAGCAGCATTTGACAAAGAATTTAAAGACTCATATAAGGAGAGCACAGATGATTTTGGTAGCTGGTCTGTGCACACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000339997.8 ENST00000377819.10 ENST00000540798.5 |
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| CDS GCA 72 bp | CCAATTGGTCAGTATGGCACTTGTAGTCACTGCTGTTaGCCAAGTCAGTACCCGCACAGGAGGAGCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: PIGQYGTCSHCC*PSQYPHRRSCS Trigger: GCTGCAGCTCCTCCTGTGCGGGTACTGACTTGGGCAACAGCAGTGACTACAAGTGCCATACTGACCAATTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000538995.1 |
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| CDS GCA 72 bp | ACTCTTCCAATTGGTCAGTATGGCACTTGTAGTCACTaGTGTTGCCCAAGTCAGTACCCGCACAGGAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: TLPIGQYGTCSH*CCPSQYPHRRS Trigger: GCTCCTCCTGTGCGGGTACTGACTTGGGCAACAGCAGTGACTACAAGTGCCATACTGACCAATTGGAAGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000538995.1 |
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| CDS GCA 72 bp | CCAATTGGTCAGTATGGCACTTGTAGTCACTGCTGTTaGCCAAGTCAGTACCTTGTGAGGTCGAAAATAGAG | + |
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Preference number: 6 (lower is better) Translates to: PIGQYGTCSHCC*PSQYLVRSKIE Trigger: CTCTATTTTCGACCTCACAAGGTACTGACTTGGGCAACAGCAGTGACTACAAGTGCCATACTGACCAATTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338850.5 |
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| CDS GCA 72 bp | ACTCTTCCAATTGGTCAGTATGGCACTTGTAGTCACTaGTGTTGCCCAAGTCAGTACCTTGTGAGGTCGAAA | + |
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Preference number: 6 (lower is better) Translates to: TLPIGQYGTCSH*CCPSQYLVRSK Trigger: TTTCGACCTCACAAGGTACTGACTTGGGCAACAGCAGTGACTACAAGTGCCATACTGACCAATTGGAAGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338850.5 |
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| CDS TCA 72 bp | TTCTTGCTGGAGAGATGCTTCTGCCCAATCACCTGTTaGTTTAGTGATGGGAGTGCTCCCATCAATAGAACA | + |
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Preference number: 6 (lower is better) Translates to: FLLERCFCPITC*FSDGSAPINRT Trigger: TGTTCTATTGATGGGAGCACTCCCATCACTAAATCAACAGGTGATTGGGCAGAAGCATCTCTCCAGCAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339997.8 ENST00000377819.10 ENST00000540798.5 |
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| CDS CAA 90 bp | TGCTGCCTCACTAGCTGGACTCCTTCCAAGAATATCAGGCTGATCTaGATGCAGCTCAGAGTCACTGACCAATTCTTCAAAGTTTTTAGA | + |
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Preference number: 6 (lower is better) Translates to: CCLTSWTPSKNIRLI*MQLRVTDQFFKVFR Trigger: TCTAAAAACTTTGAAGAATTGGTCAGTGACTCTGAGCTGCATCAAGATCAGCCTGATATTCTTGGAAGGAGTCCAGCTAGTGAGGCAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000339997.8 ENST00000377819.10 ENST00000540798.5 |
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| CDS TCA 72 bp | TTAATTCTCAGATTAAAGGAGAGTAAGGAGACAGGATaGGGCACAAAGTGTGATCCTAGACTGGACTCCGCA | + |
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Preference number: 6 (lower is better) Translates to: LILRLKESKETG*GTKCDPRLDSA Trigger: TGCGGAGTCCAGTCTAGGATCACACTTTGTGCCTCATCCTGTCTCCTTACTCTCCTTTAATCTGAGAATTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542238.5 |
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| CDS GCA 72 bp | GTCTCTGAAATGTCTTCGGATGATTCTTTATCAGTGTaGACAGACCAGCTACCAAAATCATCTGTGCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: VSEMSSDDSLSV*TDQLPKSSVLS Trigger: GGAGAGCACAGATGATTTTGGTAGCTGGTCTGTGCACACTGATAAAGAATCATCCGAAGACATTTCAGAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000339997.8 ENST00000377819.10 ENST00000540798.5 |
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| CDS GCA 72 bp | CTGCCTACTGAGCAATGCAGACATTGGGTAACGTCCTaGCTCTTTATTTCTCAGTGGAAAAAGCTTGTCATT | + |
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Preference number: 6 (lower is better) Translates to: LPTEQCRHWVTS*LFISQWKKLVI Trigger: AATGACAAGCTTTTTCCACTGAGAAATAAAGAGGCAGGACGTTACCCAATGTCTGCATTGCTCAGTAGGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000339997.8 ENST00000377819.10 ENST00000540798.5 |
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| CDS GCA 72 bp | GAGTCAGGTACAGGTTTTCCAGTAATAGCATTTTCTTaGTGGAGAGATGCTTCTGCCCAATCACCTGTTGAT | + |
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Preference number: 6 (lower is better) Translates to: ESGTGFPVIAFS*WRDASAQSPVD Trigger: ATCAACAGGTGATTGGGCAGAAGCATCTCTCCAGCAAGAAAATGCTATTACTGGAAAACCTGTACCTGACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000339997.8 ENST00000377819.10 ENST00000540798.5 |
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| CDS CCA 72 bp | TCTTGTTCTAAGTCAAGAGATGCTACTGGAGTACCTTaGGTAGGGAAAACACCTAGAGGCTCACTTCCATTT | + |
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Preference number: 6 (lower is better) Translates to: SCSKSRDATGVP*VGKTPRGSLPF Trigger: AAATGGAAGTGAGCCTCTAGGTGTTTTCCCTACCCAAGGTACTCCAGTAGCATCTCTTGACTTAGAACAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000339997.8 ENST00000377819.10 ENST00000540798.5 |
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| CDS CAA 72 bp | ACTAGCTGGACTCCTTCCAAGAATATCAGGCTGATCTaGATGCAGCTCAGAGTCACTGACCAATTCTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: TSWTPSKNIRLI*MQLRVTDQFFK Trigger: TTTGAAGAATTGGTCAGTGACTCTGAGCTGCATCAAGATCAGCCTGATATTCTTGGAAGGAGTCCAGCTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339997.8 ENST00000377819.10 ENST00000540798.5 |
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| CDS CAA 90 bp | CTGATAGTGATGGGCTTCTGGGAAATCCCAAGATCAGATCCATTCTaGACATTACGTTCTAGGATGTCATATGATCTCTGTGGCCAAGAT | + |
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Preference number: 6 (lower is better) Translates to: LIVMGFWEIPRSDPF*TLRSRMSYDLCGQD Trigger: ATCTTGGCCACAGAGATCATATGACATCCTAGAACGTAATGTCAAGAATGGATCTGATCTTGGGATTTCCCAGAAGCCCATCACTATCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339997.8 ENST00000377819.10 ENST00000540798.5 |
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| CDS CAA 72 bp | GATGCAGTCAGAAGATTTATCGGTCTGTTGTTTCACTaGGGGAACCAGATCCCAAGTCAGTATTTCGTTAGT | + |
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Preference number: 6 (lower is better) Translates to: DAVRRFIGLLFH*GNQIPSQYFVS Trigger: ACTAACGAAATACTGACTTGGGATCTGGTTCCCCAAGTGAAACAACAGACCGATAAATCTTCTGACTGCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000339997.8 ENST00000377819.10 ENST00000540798.5 |
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| CDS GCA 72 bp | ACCAGATCCCAAGTCAGTATTTCGTTAGTAAAGTTATaGATATCATTCACGCATCTGGACACCTCTTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: TRSQVSISLVKL*ISFTHLDTSSS Trigger: ACTGGAAGAGGTGTCCAGATGCGTGAATGATATGCATAACTTTACTAACGAAATACTGACTTGGGATCTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339997.8 ENST00000377819.10 ENST00000540798.5 |
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| CDS CCA 72 bp | ATGCAGTCAGAAGATTTATCGGTCTGTTGTTTCACTTaGGGAACCAGATCCCAAGTCAGTATTTCGTTAGTA | + |
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Preference number: 6 (lower is better) Translates to: MQSEDLSVCCFT*GTRSQVSISLV Trigger: TACTAACGAAATACTGACTTGGGATCTGGTTCCCCAAGTGAAACAACAGACCGATAAATCTTCTGACTGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339997.8 ENST00000377819.10 ENST00000540798.5 |
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| CDS CCA 72 bp | TCAGGTACAGGTTTTCCAGTAATAGCATTTTCTTGCTaGAGAGATGCTTCTGCCCAATCACCTGTTGATTTA | + |
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Preference number: 6 (lower is better) Translates to: SGTGFPVIAFSC*RDASAQSPVDL Trigger: TAAATCAACAGGTGATTGGGCAGAAGCATCTCTCCAGCAAGAAAATGCTATTACTGGAAAACCTGTACCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000339997.8 ENST00000377819.10 ENST00000540798.5 |
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| CDS CCA 72 bp | ATCTCTGGTTTCTGTAAAGGCTGCTATCAGGTCCTCTaGGGAGGAATCATCTATATGTTTAACATTTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: ISGFCKGCYQVL*GGIIYMFNIFP Trigger: GGGAAAAATGTTAAACATATAGATGATTCCTCCCCAGAGGACCTGATAGCAGCCTTTACAGAAACCAGAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000339997.8 ENST00000377819.10 ENST00000540798.5 |
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| CDS CCA 72 bp | TCTACCCTAGTAGTTTCTCTGATAGTGATGGGCTTCTaGGAAATCCCAAGATCAGATCCATTCTTGACATTA | + |
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Preference number: 6 (lower is better) Translates to: STLVVSLIVMGF*EIPRSDPFLTL Trigger: TAATGTCAAGAATGGATCTGATCTTGGGATTTCCCAGAAGCCCATCACTATCAGAGAAACTACTAGGGTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339997.8 ENST00000377819.10 ENST00000540798.5 |
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| CDS CCA 72 bp | GCCTCTAATTTGTCAAAAAGTTCTTGGCTTCTAACTTaGCCACTTCTTAAGGTGATTTCAAGGTCTCTAGGG | + |
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Preference number: 6 (lower is better) Translates to: ASNLSKSSWLLT*PLLKVISRSLG Trigger: CCCTAGAGACCTTGAAATCACCTTAAGAAGTGGCCAAGTTAGAAGCCAAGAACTTTTTGACAAATTAGAGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000543123.1 |
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| CDS CAA 72 bp | AGTTTTTGTGATGCAGTCAGAAGATTTATCGGTCTGTaGTTTCACTTGGGGAACCAGATCCCAAGTCAGTAT | + |
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Preference number: 6 (lower is better) Translates to: SFCDAVRRFIGL*FHLGNQIPSQY Trigger: ATACTGACTTGGGATCTGGTTCCCCAAGTGAAACAACAGACCGATAAATCTTCTGACTGCATCACAAAAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000339997.8 ENST00000377819.10 ENST00000540798.5 |
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| CDS CAA 72 bp | ATGGGCTTCTGGGAAATCCCAAGATCAGATCCATTCTaGACATTACGTTCTAGGATGTCATATGATCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: MGFWEIPRSDPF*TLRSRMSYDLC Trigger: ACAGAGATCATATGACATCCTAGAACGTAATGTCAAGAATGGATCTGATCTTGGGATTTCCCAGAAGCCCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339997.8 ENST00000377819.10 ENST00000540798.5 |
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| CDS CAA 72 bp | AAATACCATTTTTGGCTAGCTGAAACCCTAACAAACTaGGACACAGCTGACCTGTACCAAGACAATGGGAAA | + |
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Preference number: 6 (lower is better) Translates to: KYHFWLAETLTN*DTADLYQDNGK Trigger: TTTCCCATTGTCTTGGTACAGGTCAGCTGTGTCCAAGTTTGTTAGGGTTTCAGCTAGCCAAAAATGGTATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000538995.1 |
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| CDS CAA 90 bp | AAGTCCTGTAGTTTTTGTGATGCAGTCAGAAGATTTATCGGTCTGTaGTTTCACTTGGGGAACCAGATCCCAAGTCAGTATTTCGTTAGT | + |
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Preference number: 6 (lower is better) Translates to: KSCSFCDAVRRFIGL*FHLGNQIPSQYFVS Trigger: ACTAACGAAATACTGACTTGGGATCTGGTTCCCCAAGTGAAACAACAGACCGATAAATCTTCTGACTGCATCACAAAAACTACAGGACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000339997.8 ENST00000377819.10 ENST00000540798.5 |
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| CDS CAA 90 bp | GGAGATCCAGGTAATTCTGCAAGTGTGTCATCCTGTTTCTGCATATaGCCTTGCACACCTTTGATACTGAATTCTTTTGTGGAATTCAAA | + |
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Preference number: 6 (lower is better) Translates to: GDPGNSASVSSCFCI*PCTPLILNSFVEFK Trigger: TTTGAATTCCACAAAAGAATTCAGTATCAAAGGTGTGCAAGGCAATATGCAGAAACAGGATGACACACTTGCAGAATTACCTGGATCTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000339997.8 ENST00000377819.10 ENST00000540798.5 |
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| CDS TCA 72 bp | CATATGATCTCTGTGGCCAAGATTCTGGAGCAAATGTaGAAGTTTGCTTCAGTACTTCTTCAGAAGGCAATT | + |
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Preference number: 6 (lower is better) Translates to: HMISVAKILEQM*KFASVLLQKAI Trigger: AATTGCCTTCTGAAGAAGTACTGAAGCAAACTTTCACATTTGCTCCAGAATCTTGGCCACAGAGATCATATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339997.8 ENST00000377819.10 ENST00000540798.5 |
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| CDS CAA 72 bp | GGTAATTCTGCAAGTGTGTCATCCTGTTTCTGCATATaGCCTTGCACACCTTTGATACTGAATTCTTTTGTG | + |
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Preference number: 6 (lower is better) Translates to: GNSASVSSCFCI*PCTPLILNSFV Trigger: CACAAAAGAATTCAGTATCAAAGGTGTGCAAGGCAATATGCAGAAACAGGATGACACACTTGCAGAATTACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000339997.8 ENST00000377819.10 ENST00000540798.5 |
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| CDS CAA 90 bp | AGTTTTTGTGATGCAGTCAGAAGATTTATCGGTCTGTTGTTTCACTaGGGGAACCAGATCCCAAGTCAGTATTTCGTTAGTAAAGTTATG | + |
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Preference number: 6 (lower is better) Translates to: SFCDAVRRFIGLLFH*GNQIPSQYFVSKVM Trigger: CATAACTTTACTAACGAAATACTGACTTGGGATCTGGTTCCCCAAGTGAAACAACAGACCGATAAATCTTCTGACTGCATCACAAAAACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000339997.8 ENST00000377819.10 ENST00000540798.5 |
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| CDS CAA 72 bp | TTCTGCAAGTGTGTCATCCTGTTTCTGCATATTGCCTaGCACACCTTTGATACTGAATTCTTTTGTGGAATT | + |
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Preference number: 6 (lower is better) Translates to: FCKCVILFLHIA*HTFDTEFFCGI Trigger: AATTCCACAAAAGAATTCAGTATCAAAGGTGTGCAAGGCAATATGCAGAAACAGGATGACACACTTGCAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000339997.8 ENST00000377819.10 ENST00000540798.5 |
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| CDS TCA 72 bp | GTCAAATGCTGCTTTGTCAATAATTACTTCAAATGGTaGTTCAGGGGAATCCTTTTCAATAACATCATCTCC | + |
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Preference number: 6 (lower is better) Translates to: VKCCFVNNYFKW*FRGILFNNIIS Trigger: GGAGATGATGTTATTGAAAAGGATTCCCCTGAATCACCATTTGAAGTAATTATTGACAAAGCAGCATTTGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000339997.8 ENST00000377819.10 ENST00000540798.5 |
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