RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RTN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000125744

Ensembl transcript IDs: ENST00000245923.9, ENST00000344680.8, ENST00000430715.6, ENST00000587597.5, ENST00000588036.5, ENST00000589384.1, ENST00000590526.5, ENST00000590746.5, ENST00000591286.5, ENST00000591789.1, ENST00000592064.1, ENST00000593129.1

Found 441 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTaGAGGGTGGTGCCCTGTCTAGGCAACTACAAGTCCCAGCAGGCC +
Preference number: 1 (lower is better)
Translates to: GDTNASRRLQRRVRK*RVVPCLGNYKSQQA
Trigger: GGCCTGCTGGGACTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
3UTR CCA 90 bp GGGGGCAGGCGTCCTGCGGGCAGAGACACCGTTCTCATTCGGCTTTaGCTTTGGATCCGGAGACTGCGGCTGCTGCAGAGGCCAGGGCTC +
Preference number: 1 (lower is better)
Translates to: GGRRPAGRDTVLIRL*LWIRRLRLLQRPGL
Trigger: GAGCCCTGGCCTCTGCAGCAGCCGCAGTCTCCGGATCCAAAGCCAAAGCCGAATGAGAACGGTGTCTCTGCCCGCAGGACGCCTGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
3UTR CCA 90 bp AGGCGTCCTGCGGGCAGAGACACCGTTCTCATTCGGCTTTGGCTTTaGATCCGGAGACTGCGGCTGCTGCAGAGGCCAGGGCTCCGGTCC +
Preference number: 1 (lower is better)
Translates to: RRPAGRDTVLIRLWL*IRRLRLLQRPGLRS
Trigger: GGACCGGAGCCCTGGCCTCTGCAGCAGCCGCAGTCTCCGGATCCAAAGCCAAAGCCGAATGAGAACGGTGTCTCTGCCCGCAGGACGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
3UTR GCA 90 bp GCAGAGACACCGTTCTCATTCGGCTTTGGCTTTGGATCCGGAGACTaGGGCTGCTGCAGAGGCCAGGGCTCCGGTCCCTGGGATTTTAGC +
Preference number: 1 (lower is better)
Translates to: AETPFSFGFGFGSGD*GCCRGQGSGPWDFS
Trigger: GCTAAAATCCCAGGGACCGGAGCCCTGGCCTCTGCAGCAGCCGCAGTCTCCGGATCCAAAGCCAAAGCCGAATGAGAACGGTGTCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
3UTR GCA 90 bp TTGAGGGAATCCACGAGGTCTTCTACCAGGAAGAAGTGCCGCAGCTaGGTGGCCGCCGAGACCACGCGGGAGGTGATCTGGTGGGACAAA +
Preference number: 1 (lower is better)
Translates to: LRESTRSSTRKKCRS*VAAETTREVIWWDK
Trigger: TTTGTCCCACCAGATCACCTCCCGCGTGGTCTCGGCGGCCACGCAGCTGCGGCACTTCTTCCTGGTAGAAGACCTCGTGGATTCCCTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591286.5
3UTR GCA 90 bp ACACCGTTCTCATTCGGCTTTGGCTTTGGATCCGGAGACTGCGGCTaGTGCAGAGGCCAGGGCTCCGGTCCCTGGGATTTTAGCTCGGAT +
Preference number: 1 (lower is better)
Translates to: TPFSFGFGFGSGDCG*CRGQGSGPWDFSSD
Trigger: ATCCGAGCTAAAATCCCAGGGACCGGAGCCCTGGCCTCTGCAGCAGCCGCAGTCTCCGGATCCAAAGCCAAAGCCGAATGAGAACGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
3UTR-3UTR GCA 90 bp ACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCGCCCCGCGGCCAAGGTaGCTCGTCTTTCCTGGACTC +
Preference number: 2 (lower is better)
Translates to: TNASRRLQRRVRKCRVVPAPRPR*LVFPGL
Trigger: GAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGC...GGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
3UTR-3UTR GCA 90 bp ACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCGCCCCGCGGCCAAGGTaGCTCGTCTTTCCTGGACTC +
Preference number: 2 (lower is better)
Translates to: TPHGASSGGSGSAGWCPVAPRPR*LVFPGL
Trigger: GAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGC...GACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
3UTR-3UTR GCA 90 bp TCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCGCCCCGCGGCCAAGGTaGCTCGTCTTTCCTGGACTC +
Preference number: 2 (lower is better)
Translates to: SRRLQRRVRKCRVVPCLGAPRPR*LVFPGL
Trigger: GAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGC...GCCTAGACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
3UTR-3UTR GCA 90 bp GGGGCTAGTAGCATCCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAGACTGCGGCTaGTGCAGAGGCCAGGGCTCC +
Preference number: 2 (lower is better)
Translates to: GASSIQETPTPHGASSGGSGDCG*CRGQGS
Trigger: GGAGCCCTGGCCTCTGCAGCAGCCGCAGTCTCCGGA...CCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGGATGCTACTAGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
3UTR-3UTR CCA 90 bp CAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGGTGCCTCGTCTTTCCTaGACTCCTGGAGCAGAGCCT +
Preference number: 2 (lower is better)
Translates to: QRLTAPPAAGPEVQGGALVPRLS*TPGAEP
Trigger: AGGCTCTGCTCCAGGAGTCCAGGAAAGACGAGGCAC...CAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
3UTR-3UTR CCA 90 bp ACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCATTCGGCTTTGGCTTTaGATCCGGAGACTGCGGCTG +
Preference number: 2 (lower is better)
Translates to: TNASRRLQRRVRKCRVVPIRLWL*IRRLRL
Trigger: CAGCCGCAGTCTCCGGATCCAAAGCCAAAGCCGAAT...GGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
3UTR CAA 90 bp TGGGGGCAGGCGTCCTGCGGGCAGAGACACCGTTCTCATTCGGCTTaGGCTTTGGATCCGGAGACTGCGGCTGCTGCAGAGGCCAGGGCT +
Preference number: 2 (lower is better)
Translates to: WGQASCGQRHRSHSA*ALDPETAAAAEARA
Trigger: AGCCCTGGCCTCTGCAGCAGCCGCAGTCTCCGGATCCAAAGCCAAAGCCGAATGAGAACGGTGTCTCTGCCCGCAGGACGCCTGCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
3UTR-3UTR TCA 90 bp CAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGCTTTGCGGTAAACCCTaGGAGAGATGGTGCCGCAGA +
Preference number: 2 (lower is better)
Translates to: QETPTPHGASSGGSGSAGLCGKP*ERWCRR
Trigger: TCTGCGGCACCATCTCTCTCAGGGTTTACCGCAAAG...CCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591286.5
3UTR-3UTR GCA 90 bp CTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGGCCCCGCGGCCAAGGTaGCTCGTCTTTCCTGGACTC +
Preference number: 2 (lower is better)
Translates to: LQRRVRKCRVVPCLGNYKAPRPR*LVFPGL
Trigger: GAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGC...CTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
3UTR-3UTR GCA 90 bp GCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGCGGCGGGTCCGGAAGTaGAGGGTGGTGCCCTGTCTA +
Preference number: 2 (lower is better)
Translates to: AESLVGVILTPTGKRLGPRRVRK*RVVPCL
Trigger: TAGACAGGGCACCACCCTGCACTTCCGGACCCGCCG...CGGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
3UTR-3UTR GCA 90 bp GTCCCAGCAGGCCCCGCGGCCAAGGTGCCTCGTCTTTCCTGGACTCCTGGAGCATTTGGATCCGGAGACTaGGGCTGCTGCAGAGGCCAG +
Preference number: 2 (lower is better)
Translates to: VPAGPAAKVPRLSWTPGAFGSGD*GCCRGQ
Trigger: CTGGCCTCTGCAGCAGCCGCAGTCTCCGGATCCAAA...TGCTCCAGGAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGCCTGCTGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
3UTR-3UTR CCA 90 bp CAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTTTCCTGGACTCCTaGAGCAGAGCCTCTTGGGAA +
Preference number: 2 (lower is better)
Translates to: QRLTAPPAAGPEVQGGALSFLDS*SRASWE
Trigger: TTCCCAAGAGGCTCTGCTCCAGGAGTCCAGGAAAGA...CAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
3UTR-3UTR GCA 90 bp GGATCCGGAGACTGCGGCTGCTGCAGAGGCCAGGGCTCCGGTCCCTGGGATTTTTTTGGATCCGGAGACTaGGGCTGCTGCAGAGGCCAG +
Preference number: 2 (lower is better)
Translates to: GSGDCGCCRGQGSGPWDFFGSGD*GCCRGQ
Trigger: CTGGCCTCTGCAGCAGCCGCAGTCTCCGGATCCAAA...AAAATCCCAGGGACCGGAGCCCTGGCCTCTGCAGCAGCCGCAGTCTCCGGATCC
64% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
3UTR-3UTR CCA 90 bp CTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGTCTTTCCTGGACTCCTaGAGCAGAGCCTCTTGGGAA +
Preference number: 2 (lower is better)
Translates to: LTAPPAAGPEVQGGALSRSFLDS*SRASWE
Trigger: TTCCCAAGAGGCTCTGCTCCAGGAGTCCAGGAAAGA...CCTAGACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
3UTR-3UTR CCA 90 bp CCCAGCAGGCCCCGCGGCCAAGGTGCCTCGTCTTTCCTGGACTCCTGGAGCAGAATTCGGCTTTGGCTTTaGATCCGGAGACTGCGGCTG +
Preference number: 2 (lower is better)
Translates to: PSRPRGQGASSFLDSWSRIRLWL*IRRLRL
Trigger: CAGCCGCAGTCTCCGGATCCAAAGCCAAAGCCGAAT...TCTGCTCCAGGAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGCCTGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
3UTR-3UTR TCA 90 bp CCGGAGACTGCGGCTGCTGCAGAGGCCAGGGCTCCGGTCCCTGGGATTTTAGCTACATATTGGTCGATCTaGGCCTGGTGCTGCCGGTAC +
Preference number: 2 (lower is better)
Translates to: PETAAAAEARAPVPGILATYWSI*AWCCRY
Trigger: GTACCGGCAGCACCAGGCTCAGATCGACCAATATGT...AGCTAAAATCCCAGGGACCGGAGCCCTGGCCTCTGCAGCAGCCGCAGTCTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
3UTR-3UTR CCA 90 bp GTAGCATCCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAATCTTTCCTGGACTCCTaGAGCAGAGCCTCTTGGGAA +
Preference number: 2 (lower is better)
Translates to: VASRRHQRLTAPPAAGPESFLDS*SRASWE
Trigger: TTCCCAAGAGGCTCTGCTCCAGGAGTCCAGGAAAGA...TTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGGATGCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
3UTR-3UTR TCA 90 bp GCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGACATATTGGTCGATCTaGGCCTGGTGCTGCCGGTAC +
Preference number: 2 (lower is better)
Translates to: AESLVGVILTPTGKRLGPTYWSI*AWCCRY
Trigger: GTACCGGCAGCACCAGGCTCAGATCGACCAATATGT...CGGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
3UTR-3UTR GCA 90 bp GGGGCAGGCGTCCTGCGGGCAGAGACACCGTTCTCATTCGGCTTTGGCTTTGGAGACACGATGCTAAAGTaGAGGAGGCAGAGGAGGGAG +
Preference number: 2 (lower is better)
Translates to: GAGVLRAETPFSFGFGFGDTMLK*RRQRRE
Trigger: CTCCCTCCTCTGCCTCCTGCACTTTAGCATCGTGTC...TCCAAAGCCAAAGCCGAATGAGAACGGTGTCTCTGCCCGCAGGACGCCTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591286.5
3UTR-3UTR CCA 90 bp GCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGTCCCAGCACAGGGCTCCGGTCCCTaGGATTTTAGCTCGGATCTT +
Preference number: 2 (lower is better)
Translates to: AGPEVQGGALSRQLQVPAQGSGP*DFSSDL
Trigger: AAGATCCGAGCTAAAATCCCAGGGACCGGAGCCCTG...TGCTGGGACTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGACCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
3UTR-3UTR CCA 90 bp CGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGTCCCAGCAGTCTTTCCTGGACTCCTaGAGCAGAGCCTCTTGGGAA +
Preference number: 2 (lower is better)
Translates to: RVRKCRVVPCLGNYKSQQSFLDS*SRASWE
Trigger: TTCCCAAGAGGCTCTGCTCCAGGAGTCCAGGAAAGA...CTGCTGGGACTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGACCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
3UTR-3UTR CCA 90 bp AGCTCGGATCTTAGCTTTGATGTGGCTCAACTGATTGGTCACCAACCCCACATAAGTGCCGCAGCTGCGTaGCCGCCGAGACCACGCGGG +
Preference number: 2 (lower is better)
Translates to: SSDLSFDVAQLIGHQPHISAAAA*PPRPRG
Trigger: CCCGCGTGGTCTCGGCGGCCACGCAGCTGCGGCACT...TATGTGGGGTTGGTGACCAATCAGTTGAGCCACATCAAAGCTAAGATCCGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591286.5
3UTR-3UTR TCA 90 bp CGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGTCCCAGCAGGAAGAGTCAAACCATTaGAGATGGCACCCACGAAGG +
Preference number: 2 (lower is better)
Translates to: RVRKCRVVPCLGNYKSQQEESNH*RWHPRR
Trigger: CCTTCGTGGGTGCCATCTTCAATGGTTTGACTCTTC...CTGCTGGGACTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGACCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591286.5
3UTR-3UTR GCA 90 bp GATGTGGCTCAACTGATTGGTCACCAACCCCACATATTGGTCGATCTGAGCCTGGCCCCGCGGCCAAGGTaGCTCGTCTTTCCTGGACTC +
Preference number: 2 (lower is better)
Translates to: DVAQLIGHQPHILVDLSLAPRPR*LVFPGL
Trigger: GAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGC...CAGGCTCAGATCGACCAATATGTGGGGTTGGTGACCAATCAGTTGAGCCACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
3UTR-3UTR CCA 90 bp CGTGGCCGCCGAGACCACGCGGGAGGTGATCTGGTGGGACAAACGTTCCGTCTGTGTGGCTCAACTGATTaGTCACCAACCCCACATATT +
Preference number: 2 (lower is better)
Translates to: RGRRDHAGGDLVGQTFRLCGSTD*SPTPHI
Trigger: AATATGTGGGGTTGGTGACCAATCAGTTGAGCCACA...CAGACGGAACGTTTGTCCCACCAGATCACCTCCCGCGTGGTCTCGGCGGCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591286.5
3UTR-3UTR GCA 90 bp AGCTCGGATCTTAGCTTTGATGTGGCTCAACTGATTGGTCACCAACCCCACATATGGGGGCAGGCGTCCTaGGGGCAGAGACACCGTTCT +
Preference number: 2 (lower is better)
Translates to: SSDLSFDVAQLIGHQPHIWGQAS*GQRHRS
Trigger: AGAACGGTGTCTCTGCCCGCAGGACGCCTGCCCCCA...TATGTGGGGTTGGTGACCAATCAGTTGAGCCACATCAAAGCTAAGATCCGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
3UTR-3UTR GCA 90 bp AGCTCGGATCTTAGCTTTGATGTGGCTCAACTGATTGGTCACCAACCCCACATATCTACCAGGAAGAAGTaGCGCAGCTGCGTGGCCGCC +
Preference number: 2 (lower is better)
Translates to: SSDLSFDVAQLIGHQPHISTRKK*RSCVAA
Trigger: GGCGGCCACGCAGCTGCGGCACTTCTTCCTGGTAGA...TATGTGGGGTTGGTGACCAATCAGTTGAGCCACATCAAAGCTAAGATCCGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591286.5
3UTR-3UTR CCA 90 bp GATGTGGCTCAACTGATTGGTCACCAACCCCACATATTGGTCGATCTGAGCCTGACGCGGGAGGTGATCTaGTGGGACAAACGTTCCGTC +
Preference number: 2 (lower is better)
Translates to: DVAQLIGHQPHILVDLSLTREVI*WDKRSV
Trigger: GACGGAACGTTTGTCCCACCAGATCACCTCCCGCGT...CAGGCTCAGATCGACCAATATGTGGGGTTGGTGACCAATCAGTTGAGCCACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591286.5
3UTR-3UTR GCA 90 bp GATGTGGCTCAACTGATTGGTCACCAACCCCACATATTGGTCGATCTGAGCCTGCAGGTCCGCCACTTTTaGCTTCTGTGGGCCAATGCA +
Preference number: 2 (lower is better)
Translates to: DVAQLIGHQPHILVDLSLQVRHF*LLWANA
Trigger: TGCATTGGCCCACAGAAGGCAAAAGTGGCGGACCTG...CAGGCTCAGATCGACCAATATGTGGGGTTGGTGACCAATCAGTTGAGCCACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591286.5
3UTR-3UTR CAA 90 bp GTAGCATCCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAATGCAAAGCCCCGGCGTaGGGGCTAGTAGCATCCAGG +
Preference number: 3 (lower is better)
Translates to: VASRRHQRLTAPPAAGPECKAPA*GLVASR
Trigger: CCTGGATGCTACTAGCCCCAACGCCGGGGCTTTGCA...TTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGGATGCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
3UTR GCA 72 bp AACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTaGAGGGTGGTGCCCTGTCTAGGCAACTACAAGTCC +
Preference number: 3 (lower is better)
Translates to: NASRRLQRRVRK*RVVPCLGNYKS
Trigger: GGACTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
3UTR GCA 72 bp CCGTTCTCATTCGGCTTTGGCTTTGGATCCGGAGACTaGGGCTGCTGCAGAGGCCAGGGCTCCGGTCCCTGG +
Preference number: 3 (lower is better)
Translates to: PFSFGFGFGSGD*GCCRGQGSGPW
Trigger: CCAGGGACCGGAGCCCTGGCCTCTGCAGCAGCCGCAGTCTCCGGATCCAAAGCCAAAGCCGAATGAGAACGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
3UTR GCA 72 bp TCCACGAGGTCTTCTACCAGGAAGAAGTGCCGCAGCTaGGTGGCCGCCGAGACCACGCGGGAGGTGATCTGG +
Preference number: 3 (lower is better)
Translates to: STRSSTRKKCRS*VAAETTREVIW
Trigger: CCAGATCACCTCCCGCGTGGTCTCGGCGGCCACGCAGCTGCGGCACTTCTTCCTGGTAGAAGACCTCGTGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591286.5
3UTR-3UTR CAA 90 bp GTCCCAGCAGGCCCCGCGGCCAAGGTGCCTCGTCTTTCCTGGACTCCTGGAGCACATTCGGCTTTGGCTTaGGATCCGGAGACTGCGGCT +
Preference number: 3 (lower is better)
Translates to: VPAGPAAKVPRLSWTPGAHSALA*DPETAA
Trigger: AGCCGCAGTCTCCGGATCCAAAGCCAAAGCCGAATG...TGCTCCAGGAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGCCTGCTGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
3UTR CCA 72 bp GCGGGCAGAGACACCGTTCTCATTCGGCTTTGGCTTTaGATCCGGAGACTGCGGCTGCTGCAGAGGCCAGGG +
Preference number: 3 (lower is better)
Translates to: AGRDTVLIRLWL*IRRLRLLQRPG
Trigger: CCCTGGCCTCTGCAGCAGCCGCAGTCTCCGGATCCAAAGCCAAAGCCGAATGAGAACGGTGTCTCTGCCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
3UTR-3UTR CAA 90 bp CGTGGCCGCCGAGACCACGCGGGAGGTGATCTGGTGGGACAAACGTTCCGTCTGCACCAACCCCACATATaGGTCGATCTGAGCCTGGTG +
Preference number: 3 (lower is better)
Translates to: RGRRDHAGGDLVGQTFRLHQPHI*VDLSLV
Trigger: CACCAGGCTCAGATCGACCAATATGTGGGGTTGGTG...CAGACGGAACGTTTGTCCCACCAGATCACCTCCCGCGTGGTCTCGGCGGCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591286.5
3UTR TCA 72 bp CCCGGTGCACGGCCTGCAGCACTTTGCGGTAAACCCTaGGAGAGATGGTGCCGCAGAGCAGCAACAGAGCCA +
Preference number: 3 (lower is better)
Translates to: PGARPAALCGKP*ERWCRRAATEP
Trigger: TGGCTCTGTTGCTGCTCTGCGGCACCATCTCTCTCAGGGTTTACCGCAAAGTGCTGCAGGCCGTGCACCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591286.5
3UTR CCA 72 bp CCAGCAGGCCCCGCGGCCAAGGTGCCTCGTCTTTCCTaGACTCCTGGAGCAGAGCCTCTTGGGAAATGTAGT +
Preference number: 3 (lower is better)
Translates to: PAGPAAKVPRLS*TPGAEPLGKCS
Trigger: ACTACATTTCCCAAGAGGCTCTGCTCCAGGAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGCCTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
3UTR CCA 72 bp CGTCCTGCGGGCAGAGACACCGTTCTCATTCGGCTTTaGCTTTGGATCCGGAGACTGCGGCTGCTGCAGAGG +
Preference number: 3 (lower is better)
Translates to: RPAGRDTVLIRL*LWIRRLRLLQR
Trigger: CCTCTGCAGCAGCCGCAGTCTCCGGATCCAAAGCCAAAGCCGAATGAGAACGGTGTCTCTGCCCGCAGGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
3UTR TCA 72 bp GGTGGGACAAACGTTCCGTCTGCTCCCGAGTCAGGGTaGGGTCCACATCCAGGTAGGCCTGGAAAGGGTTGG +
Preference number: 3 (lower is better)
Translates to: GGTNVPSAPESG*GPHPGRPGKGW
Trigger: CCAACCCTTTCCAGGCCTACCTGGATGTGGACCTCACCCTGACTCGGGAGCAGACGGAACGTTTGTCCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591286.5
3UTR GCA 72 bp AGAGAGATGGTGCCGCAGAGCAGCAACAGAGCCAAGTaGGCGGCCACGGACACGATGCTAAAGTGCAGGAGG +
Preference number: 3 (lower is better)
Translates to: REMVPQSSNRAK*AATDTMLKCRR
Trigger: CCTCCTGCACTTTAGCATCGTGTCCGTGGCCGCGCACTTGGCTCTGTTGCTGCTCTGCGGCACCATCTCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591286.5
3UTR-3UTR CAA 90 bp TCATTCGGCTTTGGCTTTGGATCCGGAGACTGCGGCTGCTGCAGAGGCCAGGGCCACCAACCCCACATATaGGTCGATCTGAGCCTGGTG +
Preference number: 3 (lower is better)
Translates to: SFGFGFGSGDCGCCRGQGHQPHI*VDLSLV
Trigger: CACCAGGCTCAGATCGACCAATATGTGGGGTTGGTG...GCCCTGGCCTCTGCAGCAGCCGCAGTCTCCGGATCCAAAGCCAAAGCCGAATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
3UTR CCA 72 bp GACTGCGGCTGCTGCAGAGGCCAGGGCTCCGGTCCCTaGGATTTTAGCTCGGATCTTAGCTTTGATGTGGCT +
Preference number: 3 (lower is better)
Translates to: DCGCCRGQGSGP*DFSSDLSFDVA
Trigger: AGCCACATCAAAGCTAAGATCCGAGCTAAAATCCCAGGGACCGGAGCCCTGGCCTCTGCAGCAGCCGCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
CDS-3UTR TCA 90 bp TCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCGGGGCGGCGGGCAGTTaGATCCCTGCGGCCCCCGGA +
Preference number: 4 (lower is better)
Translates to: SRRLQRRVRKCRVVPCLGGAAGS*IPAAPG
Trigger: TCCGGGGGCCGCAGGGATTCAACTGCCCGCCGCCCC...GCCTAGACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp CAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGAGTGCCGCAGCTGCGTaGCCGCCGAGACCACGCGGG +
Preference number: 4 (lower is better)
Translates to: QRLTAPPAAGPEVQGGALSAAAA*PPRPRG
Trigger: CCCGCGTGGTCTCGGCGGCCACGCAGCTGCGGCACT...CAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp ACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCTCGTGGTTCCGAGACTaGGCGGCCCTGGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: TPTPHGASSGGSGSAGWCSWFRD*AALGAG
Trigger: CCCCGCCCCCAGGGCCGCTCAGTCTCGGAACCACGA...GCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp ACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCCGCCCACGACGCCGCTaGCATTCTCGCCGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: TNASRRLQRRVRKCRVVPRPRRR*HSRRLL
Trigger: GAGGAGGCGGCGAGAATGGCAGCGGCGTCGTGGGCG...GGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp CCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGAGTGCCGCAGCTGCGTaGCCGCCGAGACCACGCGGG +
Preference number: 4 (lower is better)
Translates to: PGDTNASRRLQRRVRKCRSAAAA*PPRPRG
Trigger: CCCGCGTGGTCTCGGCGGCCACGCAGCTGCGGCACT...CCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp CAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGAGTGCCGCAGCTGCGTaGCCGCCGAGACCACGCGGG +
Preference number: 4 (lower is better)
Translates to: QETPTPHGASSGGSGSAGSAAAA*PPRPRG
Trigger: CCCGCGTGGTCTCGGCGGCCACGCAGCTGCGGCACT...CCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp GACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCGCCCACGACGCCGCTaGCATTCTCGCCGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: DTNASRRLQRRVRKCRVVRPRRR*HSRRLL
Trigger: GAGGAGGCGGCGAGAATGGCAGCGGCGTCGTGGGCG...CACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp ACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCGGGGTGCCCCAGTCCTaGGACGTGGTCTCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: TPHGASSGGSGSAGWCPVGVPQS*DVVSSS
Trigger: CGAGGAGGAGACCACGTCGCAGGACTGGGGCACCCC...GACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp ACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCGACGGAGTACCGGCCTaGGGTGTCCCAGAGCCCGGA +
Preference number: 4 (lower is better)
Translates to: TNASRRLQRRVRKCRVVPDGVPA*GVPEPG
Trigger: TCCGGGCTCTGGGACACCCCAGGCCGGTACTCCGTC...GGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp ACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCAAGAAGTGCCGCAGCTaGGTGGCCGCCGAGACCACG +
Preference number: 4 (lower is better)
Translates to: TNASRRLQRRVRKCRVVPKKCRS*VAAETT
Trigger: CGTGGTCTCGGCGGCCACGCAGCTGCGGCACTTCTT...GGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp CTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGTCCGGAGACTGCGGCTaGTGCAGAGGCCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LTAPPAAGPEVQGGALSRSGDCG*CRGQGS
Trigger: GGAGCCCTGGCCTCTGCAGCAGCCGCAGTCTCCGGA...CCTAGACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp ATCCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAAGTGCCGCAGCTGCGTaGCCGCCGAGACCACGCGGG +
Preference number: 4 (lower is better)
Translates to: IQETPTPHGASSGGSGSASAAAA*PPRPRG
Trigger: CCCGCGTGGTCTCGGCGGCCACGCAGCTGCGGCACT...TGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGGAT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp TCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGAGGAGGGGGGCGGCGGGCAGTTaGATCCCTGCGGCCCCCGGA +
Preference number: 4 (lower is better)
Translates to: SLVGVILTPTGKRLGPRRGAAGS*IPAAPG
Trigger: TCCGGGGGCCGCAGGGATTCAACTGCCCGCCGCCCC...CCTCCTCGGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGA
70% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp ACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTCGGGCGATGAGGGCTaGGCAAGTCGGAGTCGTAGG +
Preference number: 4 (lower is better)
Translates to: TPHGASSGGSGSAGWCPVSGDEG*ASRSRR
Trigger: CCTACGACTCCGACTTGCTCAGCCCTCATCGCCCGA...GACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp CCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGTGGGGGCAGGCGTCCTaGGGGCAGAGACACCGTTCT +
Preference number: 4 (lower is better)
Translates to: PGDTNASRRLQRRVRKCRWGQAS*GQRHRS
Trigger: AGAACGGTGTCTCTGCCCGCAGGACGCCTGCCCCCA...CCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp CCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGCCCCGCGGCCAAGGTaGCTCGTCTTTCCTGGACTC +
Preference number: 4 (lower is better)
Translates to: PGDTNASRRLQRRVRKCRAPRPR*LVFPGL
Trigger: GAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGC...CCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp CCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGCGGCGGGTCCGGAAGTaGAGGGTGGTGCCCTGTCTA +
Preference number: 4 (lower is better)
Translates to: PGDTNASRRLQRRVRKCRRRVRK*RVVPCL
Trigger: TAGACAGGGCACCACCCTGCACTTCCGGACCCGCCG...CCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp CAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGCGGCGGGTCCGGAAGTaGAGGGTGGTGCCCTGTCTA +
Preference number: 4 (lower is better)
Translates to: QETPTPHGASSGGSGSAGRRVRK*RVVPCL
Trigger: TAGACAGGGCACCACCCTGCACTTCCGGACCCGCCG...CCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp GACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCAGAGGGCGCTCGGATaGAGGCGCGGTGTCAGGATC +
Preference number: 4 (lower is better)
Translates to: DTNASRRLQRRVRKCRVVQRALG*RRGVRI
Trigger: GATCCTGACACCGCGCCTCCATCCGAGCGCCCTCTG...CACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp TCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCCAGAGGGCGCTCGGATaGAGGCGCGGTGTCAGGATC +
Preference number: 4 (lower is better)
Translates to: SRRLQRRVRKCRVVPCLGQRALG*RRGVRI
Trigger: GATCCTGACACCGCGCCTCCATCCGAGCGCCCTCTG...GCCTAGACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp CCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGAGCCCGGACTGAGCTaGGGAGTCAAGACCTCGGGC +
Preference number: 4 (lower is better)
Translates to: PGDTNASRRLQRRVRKCREPGLS*GVKTSG
Trigger: GCCCGAGGTCTTGACTCCCCAGCTCAGTCCGGGCTC...CCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp GGGGCTAGTAGCATCCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGGACGGAGTACCGGCCTaGGGTGTCCCAGAGCCCGGA +
Preference number: 4 (lower is better)
Translates to: GASSIQETPTPHGASSGGDGVPA*GVPEPG
Trigger: TCCGGGCTCTGGGACACCCCAGGCCGGTACTCCGTC...CCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGGATGCTACTAGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp CGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGTCCCAGCAGGGGGCGGCGGGCAGTTaGATCCCTGCGGCCCCCGGA +
Preference number: 4 (lower is better)
Translates to: RVRKCRVVPCLGNYKSQQGAAGS*IPAAPG
Trigger: TCCGGGGGCCGCAGGGATTCAACTGCCCGCCGCCCC...CTGCTGGGACTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGACCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp GACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCATATCGGCTCCGAGTaGGAGGCTGGGGACACCGCT +
Preference number: 4 (lower is better)
Translates to: DTNASRRLQRRVRKCRVVHIGSE*EAGDTA
Trigger: AGCGGTGTCCCCAGCCTCTCACTCGGAGCCGATATG...CACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245923.9
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
CDS-3UTR GCA 90 bp ATCCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGGTGCCCCAGTCCTaGGACGTGGTCTCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: IQETPTPHGASSGGSGSAGVPQS*DVVSSS
Trigger: CGAGGAGGAGACCACGTCGCAGGACTGGGGCACCCC...TGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp CATCCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCGGGCAGTTGAATCCCTaGGGCCCCCGGAGCCCACTA +
Preference number: 4 (lower is better)
Translates to: HPGDTNASRRLQRRVRKCGQLNP*GPRSPL
Trigger: TAGTGGGCTCCGGGGGCCGCAGGGATTCAACTGCCC...GCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGGATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp ACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCAGCAACAGAGCCAAGTaGGCGGCCACGGACACGATG +
Preference number: 4 (lower is better)
Translates to: TPHGASSGGSGSAGWCPVSNRAK*AATDTM
Trigger: CATCGTGTCCGTGGCCGCGCACTTGGCTCTGTTGCT...GACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp CATCCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAAGAAGTGCCGCAGCTaGGTGGCCGCCGAGACCACG +
Preference number: 4 (lower is better)
Translates to: HPGDTNASRRLQRRVRKCKKCRS*VAAETT
Trigger: CGTGGTCTCGGCGGCCACGCAGCTGCGGCACTTCTT...GCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGGATG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp GGGGCTAGTAGCATCCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGAAGAAGTGCCGCAGCTaGGTGGCCGCCGAGACCACG +
Preference number: 4 (lower is better)
Translates to: GASSIQETPTPHGASSGGKKCRS*VAAETT
Trigger: CGTGGTCTCGGCGGCCACGCAGCTGCGGCACTTCTT...CCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGGATGCTACTAGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp CAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTCTACCAGGAAGAAGTaGCGCAGCTGCGTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: QETPTPHGASSGGSGSAGSTRKK*RSCVAA
Trigger: GGCGGCCACGCAGCTGCGGCACTTCTTCCTGGTAGA...CCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp CCCAGCAGGCCCCGCGGCCAAGGTGCCTCGTCTTTCCTGGACTCCTGGAGCAGATCCGGAGACTGCGGCTaGTGCAGAGGCCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PSRPRGQGASSFLDSWSRSGDCG*CRGQGS
Trigger: GGAGCCCTGGCCTCTGCAGCAGCCGCAGTCTCCGGA...TCTGCTCCAGGAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGCCTGCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp CATCCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCTGGGGGCAGGCGTCCTaGGGGCAGAGACACCGTTCT +
Preference number: 4 (lower is better)
Translates to: HPGDTNASRRLQRRVRKCWGQAS*GQRHRS
Trigger: AGAACGGTGTCTCTGCCCGCAGGACGCCTGCCCCCA...GCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGGATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp CAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGGGAGCTTCTTTGCAGTaGGCGAAGACCGGCAGGACC +
Preference number: 4 (lower is better)
Translates to: QRLTAPPAAGPEVQGGALGASLQ*AKTGRT
Trigger: GGTCCTGCCGGTCTTCGCCCACTGCAAAGAAGCTCC...CAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000591286.5
CDS-3UTR CCA 90 bp CATCCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCCCAGGCTCCGGGGATTaGCTCAGGCTGGGGATGCTC +
Preference number: 4 (lower is better)
Translates to: HPGDTNASRRLQRRVRKCPGSGD*LRLGML
Trigger: GAGCATCCCCAGCCTGAGCCAATCCCCGGAGCCTGG...GCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGGATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp TCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCGCCACCCAGCCCAGATaGTCCAACCGAAGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: SRRLQRRVRKCRVVPCLGATQPR*SNRSLR
Trigger: CCTGAGGCTTCGGTTGGACCATCTGGGCTGGGTGGC...GCCTAGACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp CAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGGCCACCCAGCCCAGATaGTCCAACCGAAGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: QETPTPHGASSGGSGSAGATQPR*SNRSLR
Trigger: CCTGAGGCTTCGGTTGGACCATCTGGGCTGGGTGGC...CCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp ATCCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGACGGAGTACCGGCCTaGGGTGTCCCAGAGCCCGGA +
Preference number: 4 (lower is better)
Translates to: IQETPTPHGASSGGSGSADGVPA*GVPEPG
Trigger: TCCGGGCTCTGGGACACCCCAGGCCGGTACTCCGTC...TGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGGAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp CTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGGCACTGTCCCCTTACTaGCTCTCGCTCCAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: LTAPPAAGPEVQGGALSRALSPY*LSLQWP
Trigger: GGGCCACTGGAGCGAGAGCCAGTAAGGGGACAGTGC...CCTAGACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp CTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCTCCGAGTGAGAGGCTaGGGACACCGCTGCTTCTCG +
Preference number: 4 (lower is better)
Translates to: LTAPPAAGPEVQGGALSRLRVRG*GHRCFS
Trigger: CGAGAAGCAGCGGTGTCCCCAGCCTCTCACTCGGAG...CCTAGACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245923.9
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
CDS-3UTR CCA 90 bp CCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGCTCCGAGTGAGAGGCTaGGGACACCGCTGCTTCTCG +
Preference number: 4 (lower is better)
Translates to: PGDTNASRRLQRRVRKCRLRVRG*GHRCFS
Trigger: CGAGAAGCAGCGGTGTCCCCAGCCTCTCACTCGGAG...CCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245923.9
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
CDS-3UTR TCA 90 bp GGGGCTAGTAGCATCCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGCATATCGGCTCCGAGTaGGAGGCTGGGGACACCGCT +
Preference number: 4 (lower is better)
Translates to: GASSIQETPTPHGASSGGHIGSE*EAGDTA
Trigger: AGCGGTGTCCCCAGCCTCTCACTCGGAGCCGATATG...CCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGGATGCTACTAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245923.9
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
CDS-3UTR GCA 90 bp ATCCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGCAGTTGAATCCCTaGGGCCCCCGGAGCCCACTA +
Preference number: 4 (lower is better)
Translates to: IQETPTPHGASSGGSGSAGQLNP*GPRSPL
Trigger: TAGTGGGCTCCGGGGGCCGCAGGGATTCAACTGCCC...TGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp TCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAGCAACAGAGCCAAGTaGGCGGCCACGGACACGATG +
Preference number: 4 (lower is better)
Translates to: SRRLQRRVRKCRVVPCLGSNRAK*AATDTM
Trigger: CATCGTGTCCGTGGCCGCGCACTTGGCTCTGTTGCT...GCCTAGACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp ACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCGACAAACGTTCCGTCTaGTCCCGAGTCAGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: TPHGASSGGSGSAGWCPVDKRSV*SRVRVR
Trigger: CCTCACCCTGACTCGGGAGCAGACGGAACGTTTGTC...GACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp TCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCTTTGGATCCGGAGACTaGGGCTGCTGCAGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: SRRLQRRVRKCRVVPCLGFGSGD*GCCRGQ
Trigger: CTGGCCTCTGCAGCAGCCGCAGTCTCCGGATCCAAA...GCCTAGACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp TCCCAGCAGGCCCCGCGGCCAAGGTGCCTCGTCTTTCCTGGACTCCTGGAGCAGTGGGGGCAGGCGTCCTaGGGGCAGAGACACCGTTCT +
Preference number: 4 (lower is better)
Translates to: SQQAPRPRCLVFPGLLEQWGQAS*GQRHRS
Trigger: AGAACGGTGTCTCTGCCCGCAGGACGCCTGCCCCCA...CTGCTCCAGGAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGCCTGCTGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp CCCAGCAGGCCCCGCGGCCAAGGTGCCTCGTCTTTCCTGGACTCCTGGAGCAGACCAGGCTCCGGGGATTaGCTCAGGCTGGGGATGCTC +
Preference number: 4 (lower is better)
Translates to: PSRPRGQGASSFLDSWSRPGSGD*LRLGML
Trigger: GAGCATCCCCAGCCTGAGCCAATCCCCGGAGCCTGG...TCTGCTCCAGGAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGCCTGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp GTAGCATCCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAACAGAGGGCGCTCGGATaGAGGCGCGGTGTCAGGATC +
Preference number: 4 (lower is better)
Translates to: VASRRHQRLTAPPAAGPEQRALG*RRGVRI
Trigger: GATCCTGACACCGCGCCTCCATCCGAGCGCCCTCTG...TTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGGATGCTAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp CCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGCGTCTTCCAGCGGGGTaGAGCTGCTGGTGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: PGDTNASRRLQRRVRKCRRLPAG*SCWWKS
Trigger: ACTCTTCCACCAGCAGCTCCACCCCGCTGGAAGACG...CCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp TCCCAGCAGGCCCCGCGGCCAAGGTGCCTCGTCTTTCCTGGACTCCTGGAGCAGTCGGGCGATGAGGGCTaGGCAAGTCGGAGTCGTAGG +
Preference number: 4 (lower is better)
Translates to: SQQAPRPRCLVFPGLLEQSGDEG*ASRSRR
Trigger: CCTACGACTCCGACTTGCTCAGCCCTCATCGCCCGA...CTGCTCCAGGAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGCCTGCTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp CCCAGCAGGCCCCGCGGCCAAGGTGCCTCGTCTTTCCTGGACTCCTGGAGCAGATCGGGCGATGAGGGCTaGGCAAGTCGGAGTCGTAGG +
Preference number: 4 (lower is better)
Translates to: PSRPRGQGASSFLDSWSRSGDEG*ASRSRR
Trigger: CCTACGACTCCGACTTGCTCAGCCCTCATCGCCCGA...TCTGCTCCAGGAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGCCTGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp ATCCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCATCCCAGAGCCCGGACTaGGCTGGGGAGTCAAGACCT +
Preference number: 4 (lower is better)
Translates to: IQETPTPHGASSGGSGSASQSPD*AGESRP
Trigger: AGGTCTTGACTCCCCAGCTCAGTCCGGGCTCTGGGA...TGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp CCCAGCAGGCCCCGCGGCCAAGGTGCCTCGTCTTTCCTGGACTCCTGGAGCAGAGCTCCCGAGTCAGGGTaGGGTCCACATCCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: PSRPRGQGASSFLDSWSRAPESG*GPHPGR
Trigger: CCTACCTGGATGTGGACCTCACCCTGACTCGGGAGC...TCTGCTCCAGGAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGCCTGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp TCCCAGCAGGCCCCGCGGCCAAGGTGCCTCGTCTTTCCTGGACTCCTGGAGCAGGCTCCCGAGTCAGGGTaGGGTCCACATCCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: SQQAPRPRCLVFPGLLEQAPESG*GPHPGR
Trigger: CCTACCTGGATGTGGACCTCACCCTGACTCGGGAGC...CTGCTCCAGGAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGCCTGCTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp CCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGAGACCACGCGGGAGGTaGTCTGGTGGGACAAACGTT +
Preference number: 4 (lower is better)
Translates to: PGDTNASRRLQRRVRKCRRPRGR*SGGTNV
Trigger: AACGTTTGTCCCACCAGATCACCTCCCGCGTGGTCT...CCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp CCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGTCGGGGTGCCCCAGTCCTaGGACGTGGTCTCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: PAAGPEVQGGALSRQLQVGVPQS*DVVSSS
Trigger: CGAGGAGGAGACCACGTCGCAGGACTGGGGCACCCC...GACTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp TCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGAGGAGGGGGGTGCCCCAGTCCTaGGACGTGGTCTCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: SLVGVILTPTGKRLGPRRGVPQS*DVVSSS
Trigger: CGAGGAGGAGACCACGTCGCAGGACTGGGGCACCCC...CCTCCTCGGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp GTCCCAGCAGGCCCCGCGGCCAAGGTGCCTCGTCTTTCCTGGACTCCTGGAGCAGGCTCAGGCTGGGGATaGTCTCCAAGCTGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: VPAGPAAKVPRLSWTPGAGSGWG*SPSCRP
Trigger: TGGGCGACAGCTTGGAGAGCATCCCCAGCCTGAGCC...TGCTCCAGGAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGCCTGCTGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp CAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCCAGTGGCCCCCACTaGTTTTCTTCCTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: QRLTAPPAAGPEVQGGALSSGPH*FSSSSS
Trigger: GCTGGAAGAGGAAGAAAAGCAGTGGGGGCCACTGGA...CAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp CCCAGCAGGCCCCGCGGCCAAGGTGCCTCGTCTTTCCTGGACTCCTGGAGCAGATCTACCAGGAAGAAGTaGCGCAGCTGCGTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: PSRPRGQGASSFLDSWSRSTRKK*RSCVAA
Trigger: GGCGGCCACGCAGCTGCGGCACTTCTTCCTGGTAGA...TCTGCTCCAGGAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGCCTGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp CGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCTCCGGAGACTGCGGCTaGTGCAGAGGCCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: RRVPSGSDPDTHREKARASGDCG*CRGQGS
Trigger: GGAGCCCTGGCCTCTGCAGCAGCCGCAGTCTCCGGA...GGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp GTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGAGGAGTCCGGAGACTGCGGCTaGTGCAGAGGCCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: VPSGSDPDTHREKARAEESGDCG*CRGQGS
Trigger: GGAGCCCTGGCCTCTGCAGCAGCCGCAGTCTCCGGA...CTCCTCGGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp AGATGGTGCCGCAGAGCAGCAACAGAGCCAAGTGCGCGGCCACGGACACGATGCTCCGGAGACTGCGGCTaGTGCAGAGGCCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: RWCRRAATEPSARPRTRCSGDCG*CRGQGS
Trigger: GGAGCCCTGGCCTCTGCAGCAGCCGCAGTCTCCGGA...GCATCGTGTCCGTGGCCGCGCACTTGGCTCTGTTGCTGCTCTGCGGCACCATCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591286.5
CDS-3UTR CCA 90 bp GACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGGGGATTGGCTCAGGCTaGGGATGCTCTCCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: DTNASRRLQRRVRKCRVVGIGSG*GCSPSC
Trigger: ACAGCTTGGAGAGCATCCCCAGCCTGAGCCAATCCC...CACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp GCTTTGGCTTTGGATCCGGAGACTGCGGCTGCTGCAGAGGCCAGGGCTCCGGTCCCAGGCTCCGGGGATTaGCTCAGGCTGGGGATGCTC +
Preference number: 4 (lower is better)
Translates to: ALALDPETAAAAEARAPVPGSGD*LRLGML
Trigger: GAGCATCCCCAGCCTGAGCCAATCCCCGGAGCCTGG...GACCGGAGCCCTGGCCTCTGCAGCAGCCGCAGTCTCCGGATCCAAAGCCAAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
CDS-3UTR CCA 90 bp CCCAGCAGGCCCCGCGGCCAAGGTGCCTCGTCTTTCCTGGACTCCTGGAGCAGAATCTCGCGATCGGGATaGGGACGGAGTACCGGCCTG +
Preference number: 4 (lower is better)
Translates to: PSRPRGQGASSFLDSWSRISRSG*GRSTGL
Trigger: CAGGCCGGTACTCCGTCCCCATCCCGATCGCGAGAT...TCTGCTCCAGGAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGCCTGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp GTCCCAGCAGGCCCCGCGGCCAAGGTGCCTCGTCTTTCCTGGACTCCTGGAGCAATCTCGCGATCGGGATaGGGACGGAGTACCGGCCTG +
Preference number: 4 (lower is better)
Translates to: VPAGPAAKVPRLSWTPGAISRSG*GRSTGL
Trigger: CAGGCCGGTACTCCGTCCCCATCCCGATCGCGAGAT...TGCTCCAGGAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGCCTGCTGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp CCCAGCAGGCCCCGCGGCCAAGGTGCCTCGTCTTTCCTGGACTCCTGGAGCAGAGCACTGTCCCCTTACTaGCTCTCGCTCCAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: PSRPRGQGASSFLDSWSRALSPY*LSLQWP
Trigger: GGGCCACTGGAGCGAGAGCCAGTAAGGGGACAGTGC...TCTGCTCCAGGAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGCCTGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp GACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCGGGAGGTGATCTGGTaGGACAAACGTTCCGTCTGC +
Preference number: 4 (lower is better)
Translates to: DTNASRRLQRRVRKCRVVREVIW*DKRSVC
Trigger: GCAGACGGAACGTTTGTCCCACCAGATCACCTCCCG...CACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp CTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCGGGAGGTGATCTGGTaGGACAAACGTTCCGTCTGC +
Preference number: 4 (lower is better)
Translates to: LTAPPAAGPEVQGGALSRREVIW*DKRSVC
Trigger: GCAGACGGAACGTTTGTCCCACCAGATCACCTCCCG...CCTAGACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp GACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGACGCGGGAGGTGATCTaGTGGGACAAACGTTCCGTC +
Preference number: 4 (lower is better)
Translates to: DTNASRRLQRRVRKCRVVTREVI*WDKRSV
Trigger: GACGGAACGTTTGTCCCACCAGATCACCTCCCGCGT...CACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp CCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGACGCGGGAGGTGATCTaGTGGGACAAACGTTCCGTC +
Preference number: 4 (lower is better)
Translates to: PGDTNASRRLQRRVRKCRTREVI*WDKRSV
Trigger: GACGGAACGTTTGTCCCACCAGATCACCTCCCGCGT...CCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp CAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGATTCGGCTTTGGCTTTaGATCCGGAGACTGCGGCTG +
Preference number: 4 (lower is better)
Translates to: QRLTAPPAAGPEVQGGALIRLWL*IRRLRL
Trigger: CAGCCGCAGTCTCCGGATCCAAAGCCAAAGCCGAAT...CAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp CCGGAGACTGCGGCTGCTGCAGAGGCCAGGGCTCCGGTCCCTGGGATTTTAGCTCATATCGGCTCCGAGTaGGAGGCTGGGGACACCGCT +
Preference number: 4 (lower is better)
Translates to: PETAAAAEARAPVPGILAHIGSE*EAGDTA
Trigger: AGCGGTGTCCCCAGCCTCTCACTCGGAGCCGATATG...AGCTAAAATCCCAGGGACCGGAGCCCTGGCCTCTGCAGCAGCCGCAGTCTCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587597.5
CDS-3UTR TCA 90 bp ACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCTGTGAAGACCACTCCTaGCGTCCTCGTGTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: TPTPHGASSGGSGSAGWCCEDHS*RPRVLP
Trigger: TGGAAGGACACGAGGACGTCAGGAGTGGTCTTCACA...GCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp TCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCACATATTGGTCGATCTaGGCCTGGTGCTGCCGGTAC +
Preference number: 4 (lower is better)
Translates to: SRRLQRRVRKCRVVPCLGTYWSI*AWCCRY
Trigger: GTACCGGCAGCACCAGGCTCAGATCGACCAATATGT...GCCTAGACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp CAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGACATATTGGTCGATCTaGGCCTGGTGCTGCCGGTAC +
Preference number: 4 (lower is better)
Translates to: QETPTPHGASSGGSGSAGTYWSI*AWCCRY
Trigger: GTACCGGCAGCACCAGGCTCAGATCGACCAATATGT...CCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp CGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGGGCAGTTGAATCCCTaGGGCCCCCGGAGCCCACTA +
Preference number: 4 (lower is better)
Translates to: RRVPSGSDPDTHREKARAGQLNP*GPRSPL
Trigger: TAGTGGGCTCCGGGGGCCGCAGGGATTCAACTGCCC...GGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp ACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCTCCAGTGGCCCCCACTaGTTTTCTTCCTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: TPTPHGASSGGSGSAGWCSSGPH*FSSSSS
Trigger: GCTGGAAGAGGAAGAAAAGCAGTGGGGGCCACTGGA...GCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp GGGGCTAGTAGCATCCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGGACAAACGTTCCGTCTaGTCCCGAGTCAGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GASSIQETPTPHGASSGGDKRSV*SRVRVR
Trigger: CCTCACCCTGACTCGGGAGCAGACGGAACGTTTGTC...CCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGGATGCTACTAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp TCCCAGCAGGCCCCGCGGCCAAGGTGCCTCGTCTTTCCTGGACTCCTGGAGCAGTTTGGATCCGGAGACTaGGGCTGCTGCAGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: SQQAPRPRCLVFPGLLEQFGSGD*GCCRGQ
Trigger: CTGGCCTCTGCAGCAGCCGCAGTCTCCGGATCCAAA...CTGCTCCAGGAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGCCTGCTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp AGTCCCAGCAGGCCCCGCGGCCAAGGTGCCTCGTCTTTCCTGGACTCCTGGAGCTTTGGATCCGGAGACTaGGGCTGCTGCAGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: SPSRPRGQGASSFLDSWSFGSGD*GCCRGQ
Trigger: CTGGCCTCTGCAGCAGCCGCAGTCTCCGGATCCAAA...GCTCCAGGAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGCCTGCTGGGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp GCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGTGGGGGCAGGCGTCCTaGGGGCAGAGACACCGTTCT +
Preference number: 4 (lower is better)
Translates to: AESLVGVILTPTGKRLGPWGQAS*GQRHRS
Trigger: AGAACGGTGTCTCTGCCCGCAGGACGCCTGCCCCCA...CGGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp GCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGGCCCCGCGGCCAAGGTaGCTCGTCTTTCCTGGACTC +
Preference number: 4 (lower is better)
Translates to: AESLVGVILTPTGKRLGPAPRPR*LVFPGL
Trigger: GAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGC...CGGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp TCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGAGGAGGCAGAGGGCGCTCGGATaGAGGCGCGGTGTCAGGATC +
Preference number: 4 (lower is better)
Translates to: SLVGVILTPTGKRLGPRRQRALG*RRGVRI
Trigger: GATCCTGACACCGCGCCTCCATCCGAGCGCCCTCTG...CCTCCTCGGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp GGATCCGGAGACTGCGGCTGCTGCAGAGGCCAGGGCTCCGGTCCCTGGGATTTTGCCACCCAGCCCAGATaGTCCAACCGAAGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: GSGDCGCCRGQGSGPWDFATQPR*SNRSLR
Trigger: CCTGAGGCTTCGGTTGGACCATCTGGGCTGGGTGGC...AAAATCCCAGGGACCGGAGCCCTGGCCTCTGCAGCAGCCGCAGTCTCCGGATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
CDS-3UTR CCA 90 bp GTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGAGGAGGAGCCCGGACTGAGCTaGGGAGTCAAGACCTCGGGC +
Preference number: 4 (lower is better)
Translates to: VPSGSDPDTHREKARAEEEPGLS*GVKTSG
Trigger: GCCCGAGGTCTTGACTCCCCAGCTCAGTCCGGGCTC...CTCCTCGGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp TCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGAGGAGGGAGCCCGGACTGAGCTaGGGAGTCAAGACCTCGGGC +
Preference number: 4 (lower is better)
Translates to: SLVGVILTPTGKRLGPRREPGLS*GVKTSG
Trigger: GCCCGAGGTCTTGACTCCCCAGCTCAGTCCGGGCTC...CCTCCTCGGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp GCTTTGGCTTTGGATCCGGAGACTGCGGCTGCTGCAGAGGCCAGGGCTCCGGTCGCACTGTCCCCTTACTaGCTCTCGCTCCAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: ALALDPETAAAAEARAPVALSPY*LSLQWP
Trigger: GGGCCACTGGAGCGAGAGCCAGTAAGGGGACAGTGC...GACCGGAGCCCTGGCCTCTGCAGCAGCCGCAGTCTCCGGATCCAAAGCCAAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
CDS-3UTR CCA 90 bp GGGGCTAGTAGCATCCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTTTGGACCCAGCCAATaGCTGTCCACAGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GASSIQETPTPHGASSGGFGPSQ*LSTEVG
Trigger: CCCCACCTCTGTGGACAGCCATTGGCTGGGTCCAAA...CCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGGATGCTACTAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245923.9
ENST00000587597.5
ENST00000590526.5
CDS-3UTR CCA 90 bp GGGGCTAGTAGCATCCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGCGGGAGGTGATCTGGTaGGACAAACGTTCCGTCTGC +
Preference number: 4 (lower is better)
Translates to: GASSIQETPTPHGASSGGREVIW*DKRSVC
Trigger: GCAGACGGAACGTTTGTCCCACCAGATCACCTCCCG...CCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGGATGCTACTAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp ACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCAGGGCTCCGGTCCCTaGGATTTTAGCTCGGATCTT +
Preference number: 4 (lower is better)
Translates to: TPTPHGASSGGSGSAGWCQGSGP*DFSSDL
Trigger: AAGATCCGAGCTAAAATCCCAGGGACCGGAGCCCTG...GCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp GCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGTCCCAGAGCCCGGACTaGGCTGGGGAGTCAAGACCT +
Preference number: 4 (lower is better)
Translates to: AESLVGVILTPTGKRLGPSQSPD*AGESRP
Trigger: AGGTCTTGACTCCCCAGCTCAGTCCGGGCTCTGGGA...CGGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp CTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGTCCCAGAGCCCGGACTaGGCTGGGGAGTCAAGACCT +
Preference number: 4 (lower is better)
Translates to: LQRRVRKCRVVPCLGNYKSQSPD*AGESRP
Trigger: AGGTCTTGACTCCCCAGCTCAGTCCGGGCTCTGGGA...CTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp TCCCAGCAGGCCCCGCGGCCAAGGTGCCTCGTCTTTCCTGGACTCCTGGAGCAGGGCGTGGCTCCACCGTaGATTCTAATTGGTCCGTGC +
Preference number: 4 (lower is better)
Translates to: SQQAPRPRCLVFPGLLEQGVAPP*ILIGPC
Trigger: GCACGGACCAATTAGAATTCACGGTGGAGCCACGCC...CTGCTCCAGGAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGCCTGCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp CCCAGCAGGCCCCGCGGCCAAGGTGCCTCGTCTTTCCTGGACTCCTGGAGCAGAGGCGTGGCTCCACCGTaGATTCTAATTGGTCCGTGC +
Preference number: 4 (lower is better)
Translates to: PSRPRGQGASSFLDSWSRGVAPP*ILIGPC
Trigger: GCACGGACCAATTAGAATTCACGGTGGAGCCACGCC...TCTGCTCCAGGAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGCCTGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp GTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGAGGAGCATATCGGCTCCGAGTaGGAGGCTGGGGACACCGCT +
Preference number: 4 (lower is better)
Translates to: VPSGSDPDTHREKARAEEHIGSE*EAGDTA
Trigger: AGCGGTGTCCCCAGCCTCTCACTCGGAGCCGATATG...CTCCTCGGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245923.9
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
CDS-3UTR TCA 90 bp GGGGCTAGTAGCATCCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGCTTTGCGGTAAACCCTaGGAGAGATGGTGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: GASSIQETPTPHGASSGGLCGKP*ERWCRR
Trigger: TCTGCGGCACCATCTCTCTCAGGGTTTACCGCAAAG...CCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGGATGCTACTAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp TCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGAGGAGGGCTCCCGAGTCAGGGTaGGGTCCACATCCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: SLVGVILTPTGKRLGPRRAPESG*GPHPGR
Trigger: CCTACCTGGATGTGGACCTCACCCTGACTCGGGAGC...CCTCCTCGGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp GTAGCATCCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAAGACCACGCGGGAGGTaGTCTGGTGGGACAAACGTT +
Preference number: 4 (lower is better)
Translates to: VASRRHQRLTAPPAAGPERPRGR*SGGTNV
Trigger: AACGTTTGTCCCACCAGATCACCTCCCGCGTGGTCT...TTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGGATGCTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp TCCCAGCAGGCCCCGCGGCCAAGGTGCCTCGTCTTTCCTGGACTCCTGGAGCAGAGACCACGCGGGAGGTaGTCTGGTGGGACAAACGTT +
Preference number: 4 (lower is better)
Translates to: SQQAPRPRCLVFPGLLEQRPRGR*SGGTNV
Trigger: AACGTTTGTCCCACCAGATCACCTCCCGCGTGGTCT...CTGCTCCAGGAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGCCTGCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp ACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCGAAGAGTCAAACCATTaGAGATGGCACCCACGAAGG +
Preference number: 4 (lower is better)
Translates to: TPHGASSGGSGSAGWCPVEESNH*RWHPRR
Trigger: CCTTCGTGGGTGCCATCTTCAATGGTTTGACTCTTC...GACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp GACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGACAGCAGGGGGATGGTaGATAGACCAATCACTCCCA +
Preference number: 4 (lower is better)
Translates to: DTNASRRLQRRVRKCRVVTAGGW*IDQSLP
Trigger: TGGGAGTGATTGGTCTATTCACCATCCCCCTGCTGT...CACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp TCATTCGGCTTTGGCTTTGGATCCGGAGACTGCGGCTGCTGCAGAGGCCAGGGCGGGCAGTTGAATCCCTaGGGCCCCCGGAGCCCACTA +
Preference number: 4 (lower is better)
Translates to: SFGFGFGSGDCGCCRGQGGQLNP*GPRSPL
Trigger: TAGTGGGCTCCGGGGGCCGCAGGGATTCAACTGCCC...GCCCTGGCCTCTGCAGCAGCCGCAGTCTCCGGATCCAAAGCCAAAGCCGAATGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
CDS-3UTR GCA 90 bp GCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGGGCTCAGGCTGGGGATaGTCTCCAAGCTGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: AESLVGVILTPTGKRLGPGSGWG*SPSCRP
Trigger: TGGGCGACAGCTTGGAGAGCATCCCCAGCCTGAGCC...CGGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp GGGGCTAGTAGCATCCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCAGTGGCCCCCACTaGTTTTCTTCCTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: GASSIQETPTPHGASSGGSSGPH*FSSSSS
Trigger: GCTGGAAGAGGAAGAAAAGCAGTGGGGGCCACTGGA...CCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGGATGCTACTAGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp ACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCATTCTAATTGGTCCGTaGTATCGAGGCACTGTCCCC +
Preference number: 4 (lower is better)
Translates to: TPHGASSGGSGSAGWCPVILIGP*YRGTVP
Trigger: GGGGACAGTGCCTCGATAGCACGGACCAATTAGAAT...GACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp ATCCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGACAAACGTTCCGTCTaGTCCCGAGTCAGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: IQETPTPHGASSGGSGSADKRSV*SRVRVR
Trigger: CCTCACCCTGACTCGGGAGCAGACGGAACGTTTGTC...TGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp GTCCCAGCAGGCCCCGCGGCCAAGGTGCCTCGTCTTTCCTGGACTCCTGGAGCAGACAAACGTTCCGTCTaGTCCCGAGTCAGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: VPAGPAAKVPRLSWTPGADKRSV*SRVRVR
Trigger: CCTCACCCTGACTCGGGAGCAGACGGAACGTTTGTC...TGCTCCAGGAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGCCTGCTGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp CGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCTCTACCAGGAAGAAGTaGCGCAGCTGCGTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: RRVPSGSDPDTHREKARASTRKK*RSCVAA
Trigger: GGCGGCCACGCAGCTGCGGCACTTCTTCCTGGTAGA...GGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp CGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGTCCCAGCAGGCCCCGCGGCCAAGGTaGCTCGTCTTTCCTGGACTC +
Preference number: 4 (lower is better)
Translates to: RVRKCRVVPCLGNYKSQQAPRPR*LVFPGL
Trigger: GAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGC...CTGCTGGGACTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGACCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp GCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGTCCCAGCACGGCGGGTCCGGAAGTaGAGGGTGGTGCCCTGTCTA +
Preference number: 4 (lower is better)
Translates to: AGPEVQGGALSRQLQVPARRVRK*RVVPCL
Trigger: TAGACAGGGCACCACCCTGCACTTCCGGACCCGCCG...TGCTGGGACTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGACCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp CGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGTCCCAGCAGCCAGGCTCCGGGGATTaGCTCAGGCTGGGGATGCTC +
Preference number: 4 (lower is better)
Translates to: RVRKCRVVPCLGNYKSQQPGSGD*LRLGML
Trigger: GAGCATCCCCAGCCTGAGCCAATCCCCGGAGCCTGG...CTGCTGGGACTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGACCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp GTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGTCCCAGCAGGCCCCAGGCTCCGGGGATTaGCTCAGGCTGGGGATGCTC +
Preference number: 4 (lower is better)
Translates to: VRKCRVVPCLGNYKSQQAPGSGD*LRLGML
Trigger: GAGCATCCCCAGCCTGAGCCAATCCCCGGAGCCTGG...GGCCTGCTGGGACTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp CTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGATCTCGCGATCGGGATaGGGACGGAGTACCGGCCTG +
Preference number: 4 (lower is better)
Translates to: LQRRVRKCRVVPCLGNYKISRSG*GRSTGL
Trigger: CAGGCCGGTACTCCGTCCCCATCCCGATCGCGAGAT...CTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp GACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGTTCCTCTTCCAGCAATaGCTCTTCGGGCCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: DTNASRRLQRRVRKCRVVFLFQQ*LFGPRV
Trigger: AACTCTGGGCCCGAAGAGCCATTGCTGGAAGAGGAA...CACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp CGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGCACTGTCCCCTTACTaGCTCTCGCTCCAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: RRVPSGSDPDTHREKARAALSPY*LSLQWP
Trigger: GGGCCACTGGAGCGAGAGCCAGTAAGGGGACAGTGC...GGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp CAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGGGCTGTCCACAGAGGTaGGGACAATTCCAAAATTGG +
Preference number: 4 (lower is better)
Translates to: QRLTAPPAAGPEVQGGALGCPQR*GQFQNW
Trigger: CCAATTTTGGAATTGTCCCCACCTCTGTGGACAGCC...CAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245923.9
ENST00000587597.5
ENST00000590526.5
CDS-3UTR CCA 90 bp CTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGCTCCGAGTGAGAGGCTaGGGACACCGCTGCTTCTCG +
Preference number: 4 (lower is better)
Translates to: LQRRVRKCRVVPCLGNYKLRVRG*GHRCFS
Trigger: CGAGAAGCAGCGGTGTCCCCAGCCTCTCACTCGGAG...CTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245923.9
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
CDS-3UTR CCA 90 bp TCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGAGGAGGCTCCGAGTGAGAGGCTaGGGACACCGCTGCTTCTCG +
Preference number: 4 (lower is better)
Translates to: SLVGVILTPTGKRLGPRRLRVRG*GHRCFS
Trigger: CGAGAAGCAGCGGTGTCCCCAGCCTCTCACTCGGAG...CCTCCTCGGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245923.9
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
CDS-3UTR CCA 90 bp GTCGCTCAGGTAATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCAGTGCCGCAGCTGCGTaGCCGCCGAGACCACGCGGG +
Preference number: 4 (lower is better)
Translates to: VAQVISAESLVGVILTPTSAAAA*PPRPRG
Trigger: CCCGCGTGGTCTCGGCGGCCACGCAGCTGCGGCACT...GGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAATTACCTGAGCGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp ACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCGTTCTCATTCGGCTTTaGCTTTGGATCCGGAGACTG +
Preference number: 4 (lower is better)
Translates to: TPHGASSGGSGSAGWCPVVLIRL*LWIRRL
Trigger: CAGTCTCCGGATCCAAAGCCAAAGCCGAATGAGAAC...GACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp TCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCTCTTTCCTGGACTCCTaGAGCAGAGCCTCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: SRRLQRRVRKCRVVPCLGSFLDS*SRASWE
Trigger: TTCCCAAGAGGCTCTGCTCCAGGAGTCCAGGAAAGA...GCCTAGACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp TCCCAGCAGGCCCCGCGGCCAAGGTGCCTCGTCTTTCCTGGACTCCTGGAGCAGGTGCCTCGTCTTTCCTaGACTCCTGGAGCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: SQQAPRPRCLVFPGLLEQVPRLS*TPGAEP
Trigger: AGGCTCTGCTCCAGGAGTCCAGGAAAGACGAGGCAC...CTGCTCCAGGAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGCCTGCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp CCCAGCAGGCCCCGCGGCCAAGGTGCCTCGTCTTTCCTGGACTCCTGGAGCAGAGTGCCTCGTCTTTCCTaGACTCCTGGAGCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: PSRPRGQGASSFLDSWSRVPRLS*TPGAEP
Trigger: AGGCTCTGCTCCAGGAGTCCAGGAAAGACGAGGCAC...TCTGCTCCAGGAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGCCTGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp CGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGTCCCAGCAGCAAGACCTCGGGCGATaGGGGCTGAGCAAGTCGGAG +
Preference number: 4 (lower is better)
Translates to: RVRKCRVVPCLGNYKSQQQDLGR*GLSKSE
Trigger: CTCCGACTTGCTCAGCCCTCATCGCCCGAGGTCTTG...CTGCTGGGACTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGACCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp GTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGTCCCAGCAGGCCCAAGACCTCGGGCGATaGGGGCTGAGCAAGTCGGAG +
Preference number: 4 (lower is better)
Translates to: VRKCRVVPCLGNYKSQQAQDLGR*GLSKSE
Trigger: CTCCGACTTGCTCAGCCCTCATCGCCCGAGGTCTTG...GGCCTGCTGGGACTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp GGCTGGGGGCAGGCGTCCTGCGGGCAGAGACACCGTTCTCATTCGGCTTTGGCTGGCGTGGCTCCACCGTaGATTCTAATTGGTCCGTGC +
Preference number: 4 (lower is better)
Translates to: GWGQASCGQRHRSHSALAGVAPP*ILIGPC
Trigger: GCACGGACCAATTAGAATTCACGGTGGAGCCACGCC...AGCCAAAGCCGAATGAGAACGGTGTCTCTGCCCGCAGGACGCCTGCCCCCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
CDS-3UTR TCA 90 bp GTAGCATCCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAATGTGAAGACCACTCCTaGCGTCCTCGTGTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: VASRRHQRLTAPPAAGPECEDHS*RPRVLP
Trigger: TGGAAGGACACGAGGACGTCAGGAGTGGTCTTCACA...TTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGGATGCTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp GTCCCAGCAGGCCCCGCGGCCAAGGTGCCTCGTCTTTCCTGGACTCCTGGAGCATGTGAAGACCACTCCTaGCGTCCTCGTGTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: VPAGPAAKVPRLSWTPGACEDHS*RPRVLP
Trigger: TGGAAGGACACGAGGACGTCAGGAGTGGTCTTCACA...TGCTCCAGGAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGCCTGCTGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp TCCCAGCAGGCCCCGCGGCCAAGGTGCCTCGTCTTTCCTGGACTCCTGGAGCAGTGTGAAGACCACTCCTaGCGTCCTCGTGTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: SQQAPRPRCLVFPGLLEQCEDHS*RPRVLP
Trigger: TGGAAGGACACGAGGACGTCAGGAGTGGTCTTCACA...CTGCTCCAGGAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGCCTGCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp CAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGGAAGAGTCAAACCATTaGAGATGGCACCCACGAAGG +
Preference number: 4 (lower is better)
Translates to: QETPTPHGASSGGSGSAGEESNH*RWHPRR
Trigger: CCTTCGTGGGTGCCATCTTCAATGGTTTGACTCTTC...CCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp ATCCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAACATATTGGTCGATCTaGGCCTGGTGCTGCCGGTAC +
Preference number: 4 (lower is better)
Translates to: IQETPTPHGASSGGSGSATYWSI*AWCCRY
Trigger: GTACCGGCAGCACCAGGCTCAGATCGACCAATATGT...TGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp TCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCTTGATGTGGCTCAACTaGTTGGTCACCAACCCCACA +
Preference number: 4 (lower is better)
Translates to: SRRLQRRVRKCRVVPCLGLMWLN*LVTNPT
Trigger: TGTGGGGTTGGTGACCAATCAGTTGAGCCACATCAA...GCCTAGACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp GTCGCTCAGGTAATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCCGCCCACGACGCCGCTaGCATTCTCGCCGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: VAQVISAESLVGVILTPTRPRRR*HSRRLL
Trigger: GAGGAGGCGGCGAGAATGGCAGCGGCGTCGTGGGCG...GGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAATTACCTGAGCGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp CGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGTCCCAGCAGGGCTCAGGCTGGGGATaGTCTCCAAGCTGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: RVRKCRVVPCLGNYKSQQGSGWG*SPSCRP
Trigger: TGGGCGACAGCTTGGAGAGCATCCCCAGCCTGAGCC...CTGCTGGGACTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGACCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp CTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGAGCAACAGAGCCAAGTaGGCGGCCACGGACACGATG +
Preference number: 4 (lower is better)
Translates to: LQRRVRKCRVVPCLGNYKSNRAK*AATDTM
Trigger: CATCGTGTCCGTGGCCGCGCACTTGGCTCTGTTGCT...CTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp GGTCACCAACCCCACATATTGGTCGATCTGAGCCTGGTGCTGCCGGTACAGCAGTCCGGAGACTGCGGCTaGTGCAGAGGCCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: GHQPHILVDLSLVLPVQQSGDCG*CRGQGS
Trigger: GGAGCCCTGGCCTCTGCAGCAGCCGCAGTCTCCGGA...CTGCTGTACCGGCAGCACCAGGCTCAGATCGACCAATATGTGGGGTTGGTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
CDS-3UTR GCA 90 bp CCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGTCTTTGGATCCGGAGACTaGGGCTGCTGCAGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: PAAGPEVQGGALSRQLQVFGSGD*GCCRGQ
Trigger: CTGGCCTCTGCAGCAGCCGCAGTCTCCGGATCCAAA...GACTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp GGATCCGGAGACTGCGGCTGCTGCAGAGGCCAGGGCTCCGGTCCCTGGGATTTTGGGATTGGCTCAGGCTaGGGATGCTCTCCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: GSGDCGCCRGQGSGPWDFGIGSG*GCSPSC
Trigger: ACAGCTTGGAGAGCATCCCCAGCCTGAGCCAATCCC...AAAATCCCAGGGACCGGAGCCCTGGCCTCTGCAGCAGCCGCAGTCTCCGGATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
CDS-3UTR CCA 90 bp CCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGTCCGTCTTCCAGCGGGGTaGAGCTGCTGGTGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: PAAGPEVQGGALSRQLQVRLPAG*SCWWKS
Trigger: ACTCTTCCACCAGCAGCTCCACCCCGCTGGAAGACG...GACTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp CAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGAATCTGTTGGGTTCTTaGGGTTCTTCGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: QRLTAPPAAGPEVQGGALNLLGS*GSSSSS
Trigger: GCTGGAAGACGAAGAACCCCAAGAACCCAACAGATT...CAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp AGGCGTCCTGCGGGCAGAGACACCGTTCTCATTCGGCTTTGGCTTTGGATCCGGGAGCCCGGACTGAGCTaGGGAGTCAAGACCTCGGGC +
Preference number: 4 (lower is better)
Translates to: RRPAGRDTVLIRLWLWIREPGLS*GVKTSG
Trigger: GCCCGAGGTCTTGACTCCCCAGCTCAGTCCGGGCTC...CCGGATCCAAAGCCAAAGCCGAATGAGAACGGTGTCTCTGCCCGCAGGACGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
CDS-3UTR CCA 90 bp GCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGTCCCAGCAGCACTGTCCCCTTACTaGCTCTCGCTCCAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: AGPEVQGGALSRQLQVPAALSPY*LSLQWP
Trigger: GGGCCACTGGAGCGAGAGCCAGTAAGGGGACAGTGC...TGCTGGGACTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGACCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp ACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCACCGTGAATTCTAATTaGTCCGTGCTATCGAGGCAC +
Preference number: 4 (lower is better)
Translates to: TPHGASSGGSGSAGWCPVTVNSN*SVLSRH
Trigger: GTGCCTCGATAGCACGGACCAATTAGAATTCACGGT...GACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp CGTGGCCGCCGAGACCACGCGGGAGGTGATCTGGTGGGACAAACGTTCCGTCTGACGCGGGAGGTGATCTaGTGGGACAAACGTTCCGTC +
Preference number: 4 (lower is better)
Translates to: RGRRDHAGGDLVGQTFRLTREVI*WDKRSV
Trigger: GACGGAACGTTTGTCCCACCAGATCACCTCCCGCGT...CAGACGGAACGTTTGTCCCACCAGATCACCTCCCGCGTGGTCTCGGCGGCCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591286.5
CDS-3UTR CCA 90 bp GTAGCATCCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAATTCGGCTTTGGCTTTaGATCCGGAGACTGCGGCTG +
Preference number: 4 (lower is better)
Translates to: VASRRHQRLTAPPAAGPEIRLWL*IRRLRL
Trigger: CAGCCGCAGTCTCCGGATCCAAAGCCAAAGCCGAAT...TTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGGATGCTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp GGGGCTAGTAGCATCCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCTTTCCTGGACTCCTaGAGCAGAGCCTCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: GASSIQETPTPHGASSGGSFLDS*SRASWE
Trigger: TTCCCAAGAGGCTCTGCTCCAGGAGTCCAGGAAAGA...CCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGGATGCTACTAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp CATCCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCTCTTTCCTGGACTCCTaGAGCAGAGCCTCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: HPGDTNASRRLQRRVRKCSFLDS*SRASWE
Trigger: TTCCCAAGAGGCTCTGCTCCAGGAGTCCAGGAAAGA...GCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp GCTTTGGCTTTGGATCCGGAGACTGCGGCTGCTGCAGAGGCCAGGGCTCCGGTCGTGCCTCGTCTTTCCTaGACTCCTGGAGCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: ALALDPETAAAAEARAPVVPRLS*TPGAEP
Trigger: AGGCTCTGCTCCAGGAGTCCAGGAAAGACGAGGCAC...GACCGGAGCCCTGGCCTCTGCAGCAGCCGCAGTCTCCGGATCCAAAGCCAAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
CDS-3UTR CCA 90 bp GTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGAGGAGGTCCTGGAATTGCAGTaGGCGAAGACCGGCAGGACC +
Preference number: 4 (lower is better)
Translates to: VPSGSDPDTHREKARAEEVLELQ*AKTGRT
Trigger: GGTCCTGCCGGTCTTCGCCCACTGCAATTCCAGGAC...CTCCTCGGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590526.5
CDS-3UTR TCA 90 bp CCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGTCGGCGTGGCTCCACCGTaGATTCTAATTGGTCCGTGC +
Preference number: 4 (lower is better)
Translates to: PAAGPEVQGGALSRQLQVGVAPP*ILIGPC
Trigger: GCACGGACCAATTAGAATTCACGGTGGAGCCACGCC...GACTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp GCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGAGACCACGCGGGAGGTaGTCTGGTGGGACAAACGTT +
Preference number: 4 (lower is better)
Translates to: AESLVGVILTPTGKRLGPRPRGR*SGGTNV
Trigger: AACGTTTGTCCCACCAGATCACCTCCCGCGTGGTCT...CGGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp CGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCAGACCACGCGGGAGGTaGTCTGGTGGGACAAACGTT +
Preference number: 4 (lower is better)
Translates to: RRVPSGSDPDTHREKARARPRGR*SGGTNV
Trigger: AACGTTTGTCCCACCAGATCACCTCCCGCGTGGTCT...GGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp GTAGCATCCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAACAGCAGGGGGATGGTaGATAGACCAATCACTCCCA +
Preference number: 4 (lower is better)
Translates to: VASRRHQRLTAPPAAGPETAGGW*IDQSLP
Trigger: TGGGAGTGATTGGTCTATTCACCATCCCCCTGCTGT...TTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGGATGCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp CATCCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCTTGATGTGGCTCAACTaGTTGGTCACCAACCCCACA +
Preference number: 4 (lower is better)
Translates to: HPGDTNASRRLQRRVRKCLMWLN*LVTNPT
Trigger: TGTGGGGTTGGTGACCAATCAGTTGAGCCACATCAA...GCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp CAGGTAATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAACGCCCACGACGCCGCTaGCATTCTCGCCGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: QVISAESLVGVILTPTGKRPRRR*HSRRLL
Trigger: GAGGAGGCGGCGAGAATGGCAGCGGCGTCGTGGGCG...TTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAATTACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp GCAGGCGTCCTGCGGGCAGAGACACCGTTCTCATTCGGCTTTGGCTTTGGATCCGGCTCAGGCTGGGGATaGTCTCCAAGCTGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: AGVLRAETPFSFGFGFGSGSGWG*SPSCRP
Trigger: TGGGCGACAGCTTGGAGAGCATCCCCAGCCTGAGCC...GGATCCAAAGCCAAAGCCGAATGAGAACGGTGTCTCTGCCCGCAGGACGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
CDS-3UTR GCA 90 bp GACACCGTTCTCATTCGGCTTTGGCTTTGGATCCGGAGACTGCGGCTGCTGCAGTGGGGGCAGGCGTCCTaGGGGCAGAGACACCGTTCT +
Preference number: 4 (lower is better)
Translates to: DTVLIRLWLWIRRLRLLQWGQAS*GQRHRS
Trigger: AGAACGGTGTCTCTGCCCGCAGGACGCCTGCCCCCA...CTGCAGCAGCCGCAGTCTCCGGATCCAAAGCCAAAGCCGAATGAGAACGGTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
CDS-3UTR GCA 90 bp ACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCAGACGGAGCTTCTTCTaGGAGAGGGAAAGAATCGAA +
Preference number: 4 (lower is better)
Translates to: TPTPHGASSGGSGSAGWCRRSFF*ERERIE
Trigger: TTCGATTCTTTCCCTCTCGCAGAAGAAGCTCCGTCT...GCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590526.5
CDS-3UTR CCA 90 bp GCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGGGGATTGGCTCAGGCTaGGGATGCTCTCCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: AESLVGVILTPTGKRLGPGIGSG*GCSPSC
Trigger: ACAGCTTGGAGAGCATCCCCAGCCTGAGCCAATCCC...CGGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp CGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGGGATTGGCTCAGGCTaGGGATGCTCTCCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: RRVPSGSDPDTHREKARAGIGSG*GCSPSC
Trigger: ACAGCTTGGAGAGCATCCCCAGCCTGAGCCAATCCC...GGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp GTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGTCCCAGCAGGCCCGTCTTCCAGCGGGGTaGAGCTGCTGGTGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: VRKCRVVPCLGNYKSQQARLPAG*SCWWKS
Trigger: ACTCTTCCACCAGCAGCTCCACCCCGCTGGAAGACG...GGCCTGCTGGGACTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp GACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGAATCTGTTGGGTTCTTaGGGTTCTTCGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: DTNASRRLQRRVRKCRVVNLLGS*GSSSSS
Trigger: GCTGGAAGACGAAGAACCCCAAGAACCCAACAGATT...CACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp ACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCAATCTGTTGGGTTCTTaGGGTTCTTCGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: TPTPHGASSGGSGSAGWCNLLGS*GSSSSS
Trigger: GCTGGAAGACGAAGAACCCCAAGAACCCAACAGATT...GCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp CTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCTGTCTCCAATCTGTTaGGTTCTTGGGGTTCTTCGT +
Preference number: 4 (lower is better)
Translates to: LTAPPAAGPEVQGGALSRLSPIC*VLGVLR
Trigger: ACGAAGAACCCCAAGAACCCAACAGATTGGAGACAG...CCTAGACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp TCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCCTGTCTCCAATCTGTTaGGTTCTTGGGGTTCTTCGT +
Preference number: 4 (lower is better)
Translates to: SRRLQRRVRKCRVVPCLGLSPIC*VLGVLR
Trigger: ACGAAGAACCCCAAGAACCCAACAGATTGGAGACAG...GCCTAGACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp ATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGACGGAGTACCGGCCTaGGGTGTCCCAGAGCCCGGA +
Preference number: 4 (lower is better)
Translates to: ISAESLVGVILTPTGKRLDGVPA*GVPEPG
Trigger: TCCGGGCTCTGGGACACCCCAGGCCGGTACTCCGTC...GAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp TCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGAGGAGGTTTGGACCCAGCCAATaGCTGTCCACAGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: SLVGVILTPTGKRLGPRRFGPSQ*LSTEVG
Trigger: CCCCACCTCTGTGGACAGCCATTGGCTGGGTCCAAA...CCTCCTCGGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245923.9
ENST00000587597.5
ENST00000590526.5
CDS-3UTR CCA 90 bp CTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGCGGGAGGTGATCTGGTaGGACAAACGTTCCGTCTGC +
Preference number: 4 (lower is better)
Translates to: LQRRVRKCRVVPCLGNYKREVIW*DKRSVC
Trigger: GCAGACGGAACGTTTGTCCCACCAGATCACCTCCCG...CTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp TCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGAGGAGGACGCGGGAGGTGATCTaGTGGGACAAACGTTCCGTC +
Preference number: 4 (lower is better)
Translates to: SLVGVILTPTGKRLGPRRTREVI*WDKRSV
Trigger: GACGGAACGTTTGTCCCACCAGATCACCTCCCGCGT...CCTCCTCGGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp GTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGAGGAGACGCGGGAGGTGATCTaGTGGGACAAACGTTCCGTC +
Preference number: 4 (lower is better)
Translates to: VPSGSDPDTHREKARAEETREVI*WDKRSV
Trigger: GACGGAACGTTTGTCCCACCAGATCACCTCCCGCGT...CTCCTCGGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
3UTR CAA 72 bp GCGTCCTGCGGGCAGAGACACCGTTCTCATTCGGCTTaGGCTTTGGATCCGGAGACTGCGGCTGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: ASCGQRHRSHSA*ALDPETAAAAE
Trigger: CTCTGCAGCAGCCGCAGTCTCCGGATCCAAAGCCAAAGCCGAATGAGAACGGTGTCTCTGCCCGCAGGACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
CDS-3UTR TCA 90 bp GCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGTCCCAGCAGGCGTGGCTCCACCGTaGATTCTAATTGGTCCGTGC +
Preference number: 4 (lower is better)
Translates to: AGPEVQGGALSRQLQVPAGVAPP*ILIGPC
Trigger: GCACGGACCAATTAGAATTCACGGTGGAGCCACGCC...TGCTGGGACTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGACCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp CTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGCTTTGCGGTAAACCCTaGGAGAGATGGTGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: LQRRVRKCRVVPCLGNYKLCGKP*ERWCRR
Trigger: TCTGCGGCACCATCTCTCTCAGGGTTTACCGCAAAG...CTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp GCCGAGACCACGCGGGAGGTGATCTGGTGGGACAAACGTTCCGTCTGCTCCCGACTTTGCGGTAAACCCTaGGAGAGATGGTGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: AETTREVIWWDKRSVCSRLCGKP*ERWCRR
Trigger: TCTGCGGCACCATCTCTCTCAGGGTTTACCGCAAAG...TCGGGAGCAGACGGAACGTTTGTCCCACCAGATCACCTCCCGCGTGGTCTCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591286.5
CDS-3UTR TCA 90 bp TCCCAGCAGGCCCCGCGGCCAAGGTGCCTCGTCTTTCCTGGACTCCTGGAGCAGGAAGAGTCAAACCATTaGAGATGGCACCCACGAAGG +
Preference number: 4 (lower is better)
Translates to: SQQAPRPRCLVFPGLLEQEESNH*RWHPRR
Trigger: CCTTCGTGGGTGCCATCTTCAATGGTTTGACTCTTC...CTGCTCCAGGAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGCCTGCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp CTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGACATATTGGTCGATCTaGGCCTGGTGCTGCCGGTAC +
Preference number: 4 (lower is better)
Translates to: LQRRVRKCRVVPCLGNYKTYWSI*AWCCRY
Trigger: GTACCGGCAGCACCAGGCTCAGATCGACCAATATGT...CTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp CCCAGCAGGCCCCGCGGCCAAGGTGCCTCGTCTTTCCTGGACTCCTGGAGCAGATTGATGTGGCTCAACTaGTTGGTCACCAACCCCACA +
Preference number: 4 (lower is better)
Translates to: PSRPRGQGASSFLDSWSRLMWLN*LVTNPT
Trigger: TGTGGGGTTGGTGACCAATCAGTTGAGCCACATCAA...TCTGCTCCAGGAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGCCTGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp GGAAATGTAGTCCTGGTCGCTCAGGTAATTAGCGCAGAGTCCCTAGTGGGAGTGCGCCCACGACGCCGCTaGCATTCTCGCCGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: GNVVLVAQVISAESLVGVRPRRR*HSRRLL
Trigger: GAGGAGGCGGCGAGAATGGCAGCGGCGTCGTGGGCG...CACTCCCACTAGGGACTCTGCGCTAATTACCTGAGCGACCAGGACTACATTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp GTAATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGGGGGTGCCCCAGTCCTaGGACGTGGTCTCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: VISAESLVGVILTPTGKRGVPQS*DVVSSS
Trigger: CGAGGAGGAGACCACGTCGCAGGACTGGGGCACCCC...CCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAATTAC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp GTAGCATCCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAATTCTAATTGGTCCGTaGTATCGAGGCACTGTCCCC +
Preference number: 4 (lower is better)
Translates to: VASRRHQRLTAPPAAGPEILIGP*YRGTVP
Trigger: GGGGACAGTGCCTCGATAGCACGGACCAATTAGAAT...TTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGGATGCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp CGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGACACGATGCTAAAGTaGAGGAGGCAGAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: RRVPSGSDPDTHREKARADTMLK*RRQRRE
Trigger: CTCCCTCCTCTGCCTCCTGCACTTTAGCATCGTGTC...GGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp GTCGCTCAGGTAATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCAAGAAGTGCCGCAGCTaGGTGGCCGCCGAGACCACG +
Preference number: 4 (lower is better)
Translates to: VAQVISAESLVGVILTPTKKCRS*VAAETT
Trigger: CGTGGTCTCGGCGGCCACGCAGCTGCGGCACTTCTT...GGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAATTACCTGAGCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp GGCCAGCTTGAGGGAATCCACGAGGTCTTCTACCAGGAAGAAGTGCCGCAGCTGTCTACCAGGAAGAAGTaGCGCAGCTGCGTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: GQLEGIHEVFYQEEVPQLSTRKK*RSCVAA
Trigger: GGCGGCCACGCAGCTGCGGCACTTCTTCCTGGTAGA...CAGCTGCGGCACTTCTTCCTGGTAGAAGACCTCGTGGATTCCCTCAAGCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591286.5
CDS-3UTR GCA 90 bp CGGGCAGAGACACCGTTCTCATTCGGCTTTGGCTTTGGATCCGGAGACTGCGGCTTTGGATCCGGAGACTaGGGCTGCTGCAGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: RAETPFSFGFGFGSGDCGFGSGD*GCCRGQ
Trigger: CTGGCCTCTGCAGCAGCCGCAGTCTCCGGATCCAAA...GCCGCAGTCTCCGGATCCAAAGCCAAAGCCGAATGAGAACGGTGTCTCTGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
CDS-3UTR GCA 90 bp GTCGCTCAGGTAATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCCGGCGGGTCCGGAAGTaGAGGGTGGTGCCCTGTCTA +
Preference number: 4 (lower is better)
Translates to: VAQVISAESLVGVILTPTRRVRK*RVVPCL
Trigger: TAGACAGGGCACCACCCTGCACTTCCGGACCCGCCG...GGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAATTACCTGAGCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp TCTCATTCGGCTTTGGCTTTGGATCCGGAGACTGCGGCTGCTGCAGAGGCCAGGGGAGCTTCTTTGCAGTaGGCGAAGACCGGCAGGACC +
Preference number: 4 (lower is better)
Translates to: SHSALALDPETAAAAEARGASLQ*AKTGRT
Trigger: GGTCCTGCCGGTCTTCGCCCACTGCAAAGAAGCTCC...CCTGGCCTCTGCAGCAGCCGCAGTCTCCGGATCCAAAGCCAAAGCCGAATGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
CDS-3UTR CCA 90 bp GGGGCTAGTAGCATCCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGCTGTCTCCAATCTGTTaGGTTCTTGGGGTTCTTCGT +
Preference number: 4 (lower is better)
Translates to: GASSIQETPTPHGASSGGLSPIC*VLGVLR
Trigger: ACGAAGAACCCCAAGAACCCAACAGATTGGAGACAG...CCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGGATGCTACTAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp GTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGTCCCAGCAGGCCTTTGGACCCAGCCAATaGCTGTCCACAGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: VRKCRVVPCLGNYKSQQAFGPSQ*LSTEVG
Trigger: CCCCACCTCTGTGGACAGCCATTGGCTGGGTCCAAA...GGCCTGCTGGGACTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245923.9
ENST00000587597.5
ENST00000590526.5
CDS-3UTR CCA 90 bp CGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGTCCCAGCAGCGGGAGGTGATCTGGTaGGACAAACGTTCCGTCTGC +
Preference number: 4 (lower is better)
Translates to: RVRKCRVVPCLGNYKSQQREVIW*DKRSVC
Trigger: GCAGACGGAACGTTTGTCCCACCAGATCACCTCCCG...CTGCTGGGACTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGACCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp CGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGTCCCAGCAGACGCGGGAGGTGATCTaGTGGGACAAACGTTCCGTC +
Preference number: 4 (lower is better)
Translates to: RVRKCRVVPCLGNYKSQQTREVI*WDKRSV
Trigger: GACGGAACGTTTGTCCCACCAGATCACCTCCCGCGT...CTGCTGGGACTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGACCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp CTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGTGTGGCTCAACTGATTaGTCACCAACCCCACATATT +
Preference number: 4 (lower is better)
Translates to: LTAPPAAGPEVQGGALSRCGSTD*SPTPHI
Trigger: AATATGTGGGGTTGGTGACCAATCAGTTGAGCCACA...CCTAGACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp TCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGAGGAGGCAGGGCTCCGGTCCCTaGGATTTTAGCTCGGATCTT +
Preference number: 4 (lower is better)
Translates to: SLVGVILTPTGKRLGPRRQGSGP*DFSSDL
Trigger: AAGATCCGAGCTAAAATCCCAGGGACCGGAGCCCTG...CCTCCTCGGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp ATCCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGTTCTCATTCGGCTTTaGCTTTGGATCCGGAGACTG +
Preference number: 4 (lower is better)
Translates to: IQETPTPHGASSGGSGSAVLIRL*LWIRRL
Trigger: CAGTCTCCGGATCCAAAGCCAAAGCCGAATGAGAAC...TGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp GTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGTCCCAGCAGGCCGTGCCTCGTCTTTCCTaGACTCCTGGAGCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: VRKCRVVPCLGNYKSQQAVPRLS*TPGAEP
Trigger: AGGCTCTGCTCCAGGAGTCCAGGAAAGACGAGGCAC...GGCCTGCTGGGACTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp AGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGAGGTGCCTCGTCTTTCCTaGACTCCTGGAGCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: RVPSGSDPDTHREKARAEVPRLS*TPGAEP
Trigger: AGGCTCTGCTCCAGGAGTCCAGGAAAGACGAGGCAC...CTCGGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp AGCTCGGATCTTAGCTTTGATGTGGCTCAACTGATTGGTCACCAACCCCACATAGGGGCGGCGGGCAGTTaGATCCCTGCGGCCCCCGGA +
Preference number: 4 (lower is better)
Translates to: SSDLSFDVAQLIGHQPHIGAAGS*IPAAPG
Trigger: TCCGGGGGCCGCAGGGATTCAACTGCCCGCCGCCCC...TATGTGGGGTTGGTGACCAATCAGTTGAGCCACATCAAAGCTAAGATCCGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
CDS-3UTR TCA 90 bp ATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCTCGGGCGATGAGGGCTaGGCAAGTCGGAGTCGTAGG +
Preference number: 4 (lower is better)
Translates to: ISAESLVGVILTPTGKRLSGDEG*ASRSRR
Trigger: CCTACGACTCCGACTTGCTCAGCCCTCATCGCCCGA...GAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp ATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCCAAGACCTCGGGCGATaGGGGCTGAGCAAGTCGGAG +
Preference number: 4 (lower is better)
Translates to: ISAESLVGVILTPTGKRLQDLGR*GLSKSE
Trigger: CTCCGACTTGCTCAGCCCTCATCGCCCGAGGTCTTG...GAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp CGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGTCCCAGCAGCTTTGCGGTAAACCCTaGGAGAGATGGTGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: RVRKCRVVPCLGNYKSQQLCGKP*ERWCRR
Trigger: TCTGCGGCACCATCTCTCTCAGGGTTTACCGCAAAG...CTGCTGGGACTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGACCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp GTCGCTCAGGTAATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGCTCCCGAGTCAGGGTaGGGTCCACATCCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: VAQVISAESLVGVILTPTAPESG*GPHPGR
Trigger: CCTACCTGGATGTGGACCTCACCCTGACTCGGGAGC...GGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAATTACCTGAGCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp GTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGTCCCAGCAGGCCACATATTGGTCGATCTaGGCCTGGTGCTGCCGGTAC +
Preference number: 4 (lower is better)
Translates to: VRKCRVVPCLGNYKSQQATYWSI*AWCCRY
Trigger: GTACCGGCAGCACCAGGCTCAGATCGACCAATATGT...GGCCTGCTGGGACTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp CAGGTAATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAGGGCAGTTGAATCCCTaGGGCCCCCGGAGCCCACTA +
Preference number: 4 (lower is better)
Translates to: QVISAESLVGVILTPTGKGQLNP*GPRSPL
Trigger: TAGTGGGCTCCGGGGGCCGCAGGGATTCAACTGCCC...TTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAATTACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp TCATTCGGCTTTGGCTTTGGATCCGGAGACTGCGGCTGCTGCAGAGGCCAGGGCGACACGATGCTAAAGTaGAGGAGGCAGAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: SFGFGFGSGDCGCCRGQGDTMLK*RRQRRE
Trigger: CTCCCTCCTCTGCCTCCTGCACTTTAGCATCGTGTC...GCCCTGGCCTCTGCAGCAGCCGCAGTCTCCGGATCCAAAGCCAAAGCCGAATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
CDS-3UTR GCA 90 bp GACACCGTTCTCATTCGGCTTTGGCTTTGGATCCGGAGACTGCGGCTGCTGCAGAGCAACAGAGCCAAGTaGGCGGCCACGGACACGATG +
Preference number: 4 (lower is better)
Translates to: DTVLIRLWLWIRRLRLLQSNRAK*AATDTM
Trigger: CATCGTGTCCGTGGCCGCGCACTTGGCTCTGTTGCT...CTGCAGCAGCCGCAGTCTCCGGATCCAAAGCCAAAGCCGAATGAGAACGGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
CDS-3UTR GCA 90 bp GTCGCTCAGGTAATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCTCTACCAGGAAGAAGTaGCGCAGCTGCGTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: VAQVISAESLVGVILTPTSTRKK*RSCVAA
Trigger: GGCGGCCACGCAGCTGCGGCACTTCTTCCTGGTAGA...GGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAATTACCTGAGCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp GTAATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGTGGGGGCAGGCGTCCTaGGGGCAGAGACACCGTTCT +
Preference number: 4 (lower is better)
Translates to: VISAESLVGVILTPTGKRWGQAS*GQRHRS
Trigger: AGAACGGTGTCTCTGCCCGCAGGACGCCTGCCCCCA...CCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAATTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp GTAATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCGGCGGGTCCGGAAGTaGAGGGTGGTGCCCTGTCTA +
Preference number: 4 (lower is better)
Translates to: VISAESLVGVILTPTGKRRRVRK*RVVPCL
Trigger: TAGACAGGGCACCACCCTGCACTTCCGGACCCGCCG...CCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAATTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp GGAAATGTAGTCCTGGTCGCTCAGGTAATTAGCGCAGAGTCCCTAGTGGGAGTGGACGGAGTACCGGCCTaGGGTGTCCCAGAGCCCGGA +
Preference number: 4 (lower is better)
Translates to: GNVVLVAQVISAESLVGVDGVPA*GVPEPG
Trigger: TCCGGGCTCTGGGACACCCCAGGCCGGTACTCCGTC...CACTCCCACTAGGGACTCTGCGCTAATTACCTGAGCGACCAGGACTACATTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp GTCGCTCAGGTAATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCATCTCGCGATCGGGATaGGGACGGAGTACCGGCCTG +
Preference number: 4 (lower is better)
Translates to: VAQVISAESLVGVILTPTISRSG*GRSTGL
Trigger: CAGGCCGGTACTCCGTCCCCATCCCGATCGCGAGAT...GGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAATTACCTGAGCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp TCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGAGGAGGTTCCTCTTCCAGCAATaGCTCTTCGGGCCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: SLVGVILTPTGKRLGPRRFLFQQ*LFGPRV
Trigger: AACTCTGGGCCCGAAGAGCCATTGCTGGAAGAGGAA...CCTCCTCGGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp AGTCCCAGCAGGCCCCGCGGCCAAGGTGCCTCGTCTTTCCTGGACTCCTGGAGCACCGTGAATTCTAATTaGTCCGTGCTATCGAGGCAC +
Preference number: 4 (lower is better)
Translates to: SPSRPRGQGASSFLDSWSTVNSN*SVLSRH
Trigger: GTGCCTCGATAGCACGGACCAATTAGAATTCACGGT...GCTCCAGGAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGCCTGCTGGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp CATCCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCTGTGGCTCAACTGATTaGTCACCAACCCCACATATT +
Preference number: 4 (lower is better)
Translates to: HPGDTNASRRLQRRVRKCCGSTD*SPTPHI
Trigger: AATATGTGGGGTTGGTGACCAATCAGTTGAGCCACA...GCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp CGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGTCCCAGCAGCAGGGCTCCGGTCCCTaGGATTTTAGCTCGGATCTT +
Preference number: 4 (lower is better)
Translates to: RVRKCRVVPCLGNYKSQQQGSGP*DFSSDL
Trigger: AAGATCCGAGCTAAAATCCCAGGGACCGGAGCCCTG...CTGCTGGGACTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGACCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp AGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGAGCAGGGCTCCGGTCCCTaGGATTTTAGCTCGGATCTT +
Preference number: 4 (lower is better)
Translates to: RVPSGSDPDTHREKARAEQGSGP*DFSSDL
Trigger: AAGATCCGAGCTAAAATCCCAGGGACCGGAGCCCTG...CTCGGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp CGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCTCTTTCCTGGACTCCTaGAGCAGAGCCTCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: RRVPSGSDPDTHREKARASFLDS*SRASWE
Trigger: TTCCCAAGAGGCTCTGCTCCAGGAGTCCAGGAAAGA...GGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp CTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGTCTTTCCTGGACTCCTaGAGCAGAGCCTCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: LQRRVRKCRVVPCLGNYKSFLDS*SRASWE
Trigger: TTCCCAAGAGGCTCTGCTCCAGGAGTCCAGGAAAGA...CTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp CGGGCAGAGACACCGTTCTCATTCGGCTTTGGCTTTGGATCCGGAGACTGCGGCGTGCCTCGTCTTTCCTaGACTCCTGGAGCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: RAETPFSFGFGFGSGDCGVPRLS*TPGAEP
Trigger: AGGCTCTGCTCCAGGAGTCCAGGAAAGACGAGGCAC...GCCGCAGTCTCCGGATCCAAAGCCAAAGCCGAATGAGAACGGTGTCTCTGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
CDS-3UTR TCA 90 bp GTAATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGTCGGGCGATGAGGGCTaGGCAAGTCGGAGTCGTAGG +
Preference number: 4 (lower is better)
Translates to: VISAESLVGVILTPTGKRSGDEG*ASRSRR
Trigger: CCTACGACTCCGACTTGCTCAGCCCTCATCGCCCGA...CCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAATTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp CAGGTAATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAACAAGACCTCGGGCGATaGGGGCTGAGCAAGTCGGAG +
Preference number: 4 (lower is better)
Translates to: QVISAESLVGVILTPTGKQDLGR*GLSKSE
Trigger: CTCCGACTTGCTCAGCCCTCATCGCCCGAGGTCTTG...TTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAATTACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp CAGGTAATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAATCCCAGAGCCCGGACTaGGCTGGGGAGTCAAGACCT +
Preference number: 4 (lower is better)
Translates to: QVISAESLVGVILTPTGKSQSPD*AGESRP
Trigger: AGGTCTTGACTCCCCAGCTCAGTCCGGGCTCTGGGA...TTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAATTACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp CGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGTCCCAGCAGACAGCAGGGGGATGGTaGATAGACCAATCACTCCCA +
Preference number: 4 (lower is better)
Translates to: RVRKCRVVPCLGNYKSQQTAGGW*IDQSLP
Trigger: TGGGAGTGATTGGTCTATTCACCATCCCCCTGCTGT...CTGCTGGGACTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGACCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp GTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGAGGAGACAGCAGGGGGATGGTaGATAGACCAATCACTCCTT +
Preference number: 4 (lower is better)
Translates to: VPSGSDPDTHREKARAEETAGGW*IDQSLL
Trigger: AAGGAGTGATTGGTCTATTCACCATCCCCCTGCTGT...CTCCTCGGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587597.5
CDS-3UTR GCA 90 bp CCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGTCAATTCCCGGGCTGTGTaGAGCTCTCGAAAATCAGAG +
Preference number: 4 (lower is better)
Translates to: PAAGPEVQGGALSRQLQVNSRAV*SSRKSE
Trigger: CTCTGATTTTCGAGAGCTGCACACAGCCCGGGAATT...GACTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp GGAAATGTAGTCCTGGTCGCTCAGGTAATTAGCGCAGAGTCCCTAGTGGGAGTGAAGAAGTGCCGCAGCTaGGTGGCCGCCGAGACCACG +
Preference number: 4 (lower is better)
Translates to: GNVVLVAQVISAESLVGVKKCRS*VAAETT
Trigger: CGTGGTCTCGGCGGCCACGCAGCTGCGGCACTTCTT...CACTCCCACTAGGGACTCTGCGCTAATTACCTGAGCGACCAGGACTACATTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp CAGGGCTCCGGTCCCTGGGATTTTAGCTCGGATCTTAGCTTTGATGTGGCTCAAGCCCCGCGGCCAAGGTaGCTCGTCTTTCCTGGACTC +
Preference number: 4 (lower is better)
Translates to: QGSGPWDFSSDLSFDVAQAPRPR*LVFPGL
Trigger: GAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGC...TTGAGCCACATCAAAGCTAAGATCCGAGCTAAAATCCCAGGGACCGGAGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
CDS-3UTR GCA 90 bp GGAAATGTAGTCCTGGTCGCTCAGGTAATTAGCGCAGAGTCCCTAGTGGGAGTGCGGCGGGTCCGGAAGTaGAGGGTGGTGCCCTGTCTA +
Preference number: 4 (lower is better)
Translates to: GNVVLVAQVISAESLVGVRRVRK*RVVPCL
Trigger: TAGACAGGGCACCACCCTGCACTTCCGGACCCGCCG...CACTCCCACTAGGGACTCTGCGCTAATTACCTGAGCGACCAGGACTACATTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp GTCGCTCAGGTAATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGAGCTTCTTTGCAGTaGGCGAAGACCGGCAGGACC +
Preference number: 4 (lower is better)
Translates to: VAQVISAESLVGVILTPTGASLQ*AKTGRT
Trigger: GGTCCTGCCGGTCTTCGCCCACTGCAAAGAAGCTCC...GGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAATTACCTGAGCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000591286.5
CDS-3UTR CCA 90 bp CAGGGCTCCGGTCCCTGGGATTTTAGCTCGGATCTTAGCTTTGATGTGGCTCAAGAGCCCGGACTGAGCTaGGGAGTCAAGACCTCGGGC +
Preference number: 4 (lower is better)
Translates to: QGSGPWDFSSDLSFDVAQEPGLS*GVKTSG
Trigger: GCCCGAGGTCTTGACTCCCCAGCTCAGTCCGGGCTC...TTGAGCCACATCAAAGCTAAGATCCGAGCTAAAATCCCAGGGACCGGAGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
CDS-3UTR CCA 90 bp GCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGGGCTGTCCACAGAGGTaGGGACAATTCCAAAATTGG +
Preference number: 4 (lower is better)
Translates to: AESLVGVILTPTGKRLGPGCPQR*GQFQNW
Trigger: CCAATTTTGGAATTGTCCCCACCTCTGTGGACAGCC...CGGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245923.9
ENST00000587597.5
ENST00000590526.5
CDS-3UTR CCA 90 bp TCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGAGGAGGGTTCTCATTCGGCTTTaGCTTTGGATCCGGAGACTG +
Preference number: 4 (lower is better)
Translates to: SLVGVILTPTGKRLGPRRVLIRL*LWIRRL
Trigger: CAGTCTCCGGATCCAAAGCCAAAGCCGAATGAGAAC...CCTCCTCGGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp GTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGTCCCAGCAGGCCTCTTTCCTGGACTCCTaGAGCAGAGCCTCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: VRKCRVVPCLGNYKSQQASFLDS*SRASWE
Trigger: TTCCCAAGAGGCTCTGCTCCAGGAGTCCAGGAAAGA...GGCCTGCTGGGACTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp AGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGAGGAAGTGTCCCAGTCCTaGAATTGCAGTGGGCGAAGA +
Preference number: 4 (lower is better)
Translates to: RVPSGSDPDTHREKARAEEVSQS*NCSGRR
Trigger: TCTTCGCCCACTGCAATTCCAGGACTGGGACACTTC...CTCGGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590526.5
CDS-3UTR TCA 90 bp CAGGGCTCCGGTCCCTGGGATTTTAGCTCGGATCTTAGCTTTGATGTGGCTCAAGCTCCCGAGTCAGGGTaGGGTCCACATCCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: QGSGPWDFSSDLSFDVAQAPESG*GPHPGR
Trigger: CCTACCTGGATGTGGACCTCACCCTGACTCGGGAGC...TTGAGCCACATCAAAGCTAAGATCCGAGCTAAAATCCCAGGGACCGGAGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
CDS-3UTR TCA 90 bp GTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGTCCCAGCAGGCCGAAGAGTCAAACCATTaGAGATGGCACCCACGAAGG +
Preference number: 4 (lower is better)
Translates to: VRKCRVVPCLGNYKSQQAEESNH*RWHPRR
Trigger: CCTTCGTGGGTGCCATCTTCAATGGTTTGACTCTTC...GGCCTGCTGGGACTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp GCAGGCGTCCTGCGGGCAGAGACACCGTTCTCATTCGGCTTTGGCTTTGGATCCACAGCAGGGGGATGGTaGATAGACCAATCACTCCCA +
Preference number: 4 (lower is better)
Translates to: AGVLRAETPFSFGFGFGSTAGGW*IDQSLP
Trigger: TGGGAGTGATTGGTCTATTCACCATCCCCCTGCTGT...GGATCCAAAGCCAAAGCCGAATGAGAACGGTGTCTCTGCCCGCAGGACGCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591286.5
CDS-3UTR GCA 90 bp CGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGTCCCAGCAGAATTCCCGGGCTGTGTaGAGCTCTCGAAAATCAGAG +
Preference number: 4 (lower is better)
Translates to: RVRKCRVVPCLGNYKSQQNSRAV*SSRKSE
Trigger: CTCTGATTTTCGAGAGCTGCACACAGCCCGGGAATT...CTGCTGGGACTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGACCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp GGGGCAGGCGTCCTGCGGGCAGAGACACCGTTCTCATTCGGCTTTGGCTTTGGAAATTCCCGGGCTGTGTaGAGCTCTCGAAAATCAGAG +
Preference number: 4 (lower is better)
Translates to: GAGVLRAETPFSFGFGFGNSRAV*SSRKSE
Trigger: CTCTGATTTTCGAGAGCTGCACACAGCCCGGGAATT...TCCAAAGCCAAAGCCGAATGAGAACGGTGTCTCTGCCCGCAGGACGCCTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
CDS-3UTR GCA 90 bp GGGGCAGGCGTCCTGCGGGCAGAGACACCGTTCTCATTCGGCTTTGGCTTTGGAATTCTAATTGGTCCGTaGTATCGAGGCACTGTCCCC +
Preference number: 4 (lower is better)
Translates to: GAGVLRAETPFSFGFGFGILIGP*YRGTVP
Trigger: GGGGACAGTGCCTCGATAGCACGGACCAATTAGAAT...TCCAAAGCCAAAGCCGAATGAGAACGGTGTCTCTGCCCGCAGGACGCCTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
CDS-3UTR GCA 90 bp CAGGTAATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGCAACAGAGCCAAGTaGGCGGCCACGGACACGATG +
Preference number: 4 (lower is better)
Translates to: QVISAESLVGVILTPTGKSNRAK*AATDTM
Trigger: CATCGTGTCCGTGGCCGCGCACTTGGCTCTGTTGCT...TTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAATTACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp ACTGATTGGTCACCAACCCCACATATTGGTCGATCTGAGCCTGGTGCTGCCGGTAGCAACAGAGCCAAGTaGGCGGCCACGGACACGATG +
Preference number: 4 (lower is better)
Translates to: TDWSPTPHIGRSEPGAAGSNRAK*AATDTM
Trigger: CATCGTGTCCGTGGCCGCGCACTTGGCTCTGTTGCT...ACCGGCAGCACCAGGCTCAGATCGACCAATATGTGGGGTTGGTGACCAATCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
CDS-3UTR CCA 90 bp ATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGATTGGCTCAGGCTaGGGATGCTCTCCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: ISAESLVGVILTPTGKRLGIGSG*GCSPSC
Trigger: ACAGCTTGGAGAGCATCCCCAGCCTGAGCCAATCCC...GAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp ACTGATTGGTCACCAACCCCACATATTGGTCGATCTGAGCCTGGTGCTGCCGGTCGTCTTCCAGCGGGGTaGAGCTGCTGGTGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: TDWSPTPHIGRSEPGAAGRLPAG*SCWWKS
Trigger: ACTCTTCCACCAGCAGCTCCACCCCGCTGGAAGACG...ACCGGCAGCACCAGGCTCAGATCGACCAATATGTGGGGTTGGTGACCAATCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
CDS-3UTR CCA 90 bp GCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGCTGTCTCCAATCTGTTaGGTTCTTGGGGTTCTTCGT +
Preference number: 4 (lower is better)
Translates to: AESLVGVILTPTGKRLGPLSPIC*VLGVLR
Trigger: ACGAAGAACCCCAAGAACCCAACAGATTGGAGACAG...CGGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp GCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGACCGTGAATTCTAATTaGTCCGTGCTATCGAGGCAC +
Preference number: 4 (lower is better)
Translates to: AESLVGVILTPTGKRLGPTVNSN*SVLSRH
Trigger: GTGCCTCGATAGCACGGACCAATTAGAATTCACGGT...CGGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp AGATGGTGCCGCAGAGCAGCAACAGAGCCAAGTGCGCGGCCACGGACACGATGCACCGTGAATTCTAATTaGTCCGTGCTATCGAGGCAC +
Preference number: 4 (lower is better)
Translates to: RWCRRAATEPSARPRTRCTVNSN*SVLSRH
Trigger: GTGCCTCGATAGCACGGACCAATTAGAATTCACGGT...GCATCGTGTCCGTGGCCGCGCACTTGGCTCTGTTGCTGCTCTGCGGCACCATCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591286.5
CDS-3UTR CCA 90 bp GGGGCTAGTAGCATCCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGGGACAATTCCAAAATTaGAACCGTCTTGTAAACAGC +
Preference number: 4 (lower is better)
Translates to: GASSIQETPTPHGASSGGGQFQN*NRLVNS
Trigger: GCTGTTTACAAGACGGTTCCAATTTTGGAATTGTCC...CCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGGATGCTACTAGCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000245923.9
ENST00000587597.5
ENST00000590526.5
CDS-3UTR CCA 90 bp TCATTCGGCTTTGGCTTTGGATCCGGAGACTGCGGCTGCTGCAGAGGCCAGGGCGGCTGTCCACAGAGGTaGGGACAATTCCAAAATTGG +
Preference number: 4 (lower is better)
Translates to: SFGFGFGSGDCGCCRGQGGCPQR*GQFQNW
Trigger: CCAATTTTGGAATTGTCCCCACCTCTGTGGACAGCC...GCCCTGGCCTCTGCAGCAGCCGCAGTCTCCGGATCCAAAGCCAAAGCCGAATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587597.5
CDS-3UTR CCA 90 bp GACGTCCTCGTGTCCTTCCAGTACAGCAGGTCCGCCACTTTTGCCTTCTGTGGGATTCGGCTTTGGCTTTaGATCCGGAGACTGCGGCTG +
Preference number: 4 (lower is better)
Translates to: DVLVSFQYSRSATFAFCGIRLWL*IRRLRL
Trigger: CAGCCGCAGTCTCCGGATCCAAAGCCAAAGCCGAAT...CCCACAGAAGGCAAAAGTGGCGGACCTGCTGTACTGGAAGGACACGAGGACGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591286.5
CDS-3UTR TCA 90 bp ATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCTGTGAAGACCACTCCTaGCGTCCTCGTGTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: ISAESLVGVILTPTGKRLCEDHS*RPRVLP
Trigger: TGGAAGGACACGAGGACGTCAGGAGTGGTCTTCACA...GAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp CAGGTAATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGACCACGCGGGAGGTaGTCTGGTGGGACAAACGTT +
Preference number: 4 (lower is better)
Translates to: QVISAESLVGVILTPTGKRPRGR*SGGTNV
Trigger: AACGTTTGTCCCACCAGATCACCTCCCGCGTGGTCT...TTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAATTACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp ATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGACACGATGCTAAAGTaGAGGAGGCAGAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: ISAESLVGVILTPTGKRLDTMLK*RRQRRE
Trigger: CTCCCTCCTCTGCCTCCTGCACTTTAGCATCGTGTC...GAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp TGGTCACCAACCCCACATATTGGTCGATCTGAGCCTGGTGCTGCCGGTACAGCACAGGTCCGCCACTTTTaGCTTCTGTGGGCCAATGCA +
Preference number: 4 (lower is better)
Translates to: WSPTPHIGRSEPGAAGTAQVRHF*LLWANA
Trigger: TGCATTGGCCCACAGAAGGCAAAAGTGGCGGACCTG...TGCTGTACCGGCAGCACCAGGCTCAGATCGACCAATATGTGGGGTTGGTGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591286.5
CDS-3UTR CCA 90 bp GATGTGGCTCAACTGATTGGTCACCAACCCCACATATTGGTCGATCTGAGCCTGGCCACCCAGCCCAGATaGTCCAACCGAAGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: DVAQLIGHQPHILVDLSLATQPR*SNRSLR
Trigger: CCTGAGGCTTCGGTTGGACCATCTGGGCTGGGTGGC...CAGGCTCAGATCGACCAATATGTGGGGTTGGTGACCAATCAGTTGAGCCACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
CDS-3UTR CCA 90 bp AGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGAGAATCTGTTGGGTTCTTaGGGTTCTTCGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: RVPSGSDPDTHREKARAENLLGS*GSSSSS
Trigger: GCTGGAAGACGAAGAACCCCAAGAACCCAACAGATT...CTCGGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp GTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGTCCCAGCAGGCCAATCTGTTGGGTTCTTaGGGTTCTTCGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: VRKCRVVPCLGNYKSQQANLLGS*GSSSSS
Trigger: GCTGGAAGACGAAGAACCCCAAGAACCCAACAGATT...GGCCTGCTGGGACTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp CGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGTCCCAGCAGCTGTCTCCAATCTGTTaGGTTCTTGGGGTTCTTCGT +
Preference number: 4 (lower is better)
Translates to: RVRKCRVVPCLGNYKSQQLSPIC*VLGVLR
Trigger: ACGAAGAACCCCAAGAACCCAACAGATTGGAGACAG...CTGCTGGGACTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGACCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp GATGTGGCTCAACTGATTGGTCACCAACCCCACATATTGGTCGATCTGAGCCTGATCTCGCGATCGGGATaGGGACGGAGTACCGGCCTG +
Preference number: 4 (lower is better)
Translates to: DVAQLIGHQPHILVDLSLISRSG*GRSTGL
Trigger: CAGGCCGGTACTCCGTCCCCATCCCGATCGCGAGAT...CAGGCTCAGATCGACCAATATGTGGGGTTGGTGACCAATCAGTTGAGCCACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
CDS-3UTR CCA 90 bp GTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGTCCCAGCAGGCCACCGTGAATTCTAATTaGTCCGTGCTATCGAGGCAC +
Preference number: 4 (lower is better)
Translates to: VRKCRVVPCLGNYKSQQATVNSN*SVLSRH
Trigger: GTGCCTCGATAGCACGGACCAATTAGAATTCACGGT...GGCCTGCTGGGACTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp GTCCCAGCAGGCCCCGCGGCCAAGGTGCCTCGTCTTTCCTGGACTCCTGGAGCAGGACAATTCCAAAATTaGAACCGTCTTGTAAACAGC +
Preference number: 4 (lower is better)
Translates to: VPAGPAAKVPRLSWTPGAGQFQN*NRLVNS
Trigger: GCTGTTTACAAGACGGTTCCAATTTTGGAATTGTCC...TGCTCCAGGAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGCCTGCTGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245923.9
ENST00000587597.5
ENST00000590526.5
CDS-3UTR CCA 90 bp GTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGAGGAGTGTGGCTCAACTGATTaGTCACCAACCCCACATATT +
Preference number: 4 (lower is better)
Translates to: VPSGSDPDTHREKARAEECGSTD*SPTPHI
Trigger: AATATGTGGGGTTGGTGACCAATCAGTTGAGCCACA...CTCCTCGGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp GTAATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTTTGCGGTAAACCCTaGGAGAGATGGTGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: VISAESLVGVILTPTGKRLCGKP*ERWCRR
Trigger: TCTGCGGCACCATCTCTCTCAGGGTTTACCGCAAAG...CCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAATTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp CAGGTAATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAACATATTGGTCGATCTaGGCCTGGTGCTGCCGGTAC +
Preference number: 4 (lower is better)
Translates to: QVISAESLVGVILTPTGKTYWSI*AWCCRY
Trigger: GTACCGGCAGCACCAGGCTCAGATCGACCAATATGT...TTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAATTACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp GTAATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGGACACGATGCTAAAGTaGAGGAGGCAGAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: VISAESLVGVILTPTGKRDTMLK*RRQRRE
Trigger: CTCCCTCCTCTGCCTCCTGCACTTTAGCATCGTGTC...CCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAATTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp GGAAATGTAGTCCTGGTCGCTCAGGTAATTAGCGCAGAGTCCCTAGTGGGAGTGGACAAACGTTCCGTCTaGTCCCGAGTCAGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GNVVLVAQVISAESLVGVDKRSV*SRVRVR
Trigger: CCTCACCCTGACTCGGGAGCAGACGGAACGTTTGTC...CACTCCCACTAGGGACTCTGCGCTAATTACCTGAGCGACCAGGACTACATTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp CAGGGCTCCGGTCCCTGGGATTTTAGCTCGGATCTTAGCTTTGATGTGGCTCAAGACAAACGTTCCGTCTaGTCCCGAGTCAGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: QGSGPWDFSSDLSFDVAQDKRSV*SRVRVR
Trigger: CCTCACCCTGACTCGGGAGCAGACGGAACGTTTGTC...TTGAGCCACATCAAAGCTAAGATCCGAGCTAAAATCCCAGGGACCGGAGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
CDS-3UTR GCA 90 bp CGGGCAGAGACACCGTTCTCATTCGGCTTTGGCTTTGGATCCGGAGACTGCGGCCCTTCTGTGGGCCAATaGAGCATCTTCATACACGTT +
Preference number: 4 (lower is better)
Translates to: RAETPFSFGFGFGSGDCGPSVGQ*SIFIHV
Trigger: AACGTGTATGAAGATGCTGCATTGGCCCACAGAAGG...GCCGCAGTCTCCGGATCCAAAGCCAAAGCCGAATGAGAACGGTGTCTCTGCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591286.5
CDS-3UTR CCA 90 bp ATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCTTCCTCTTCCAGCAATaGCTCTTCGGGCCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: ISAESLVGVILTPTGKRLFLFQQ*LFGPRV
Trigger: AACTCTGGGCCCGAAGAGCCATTGCTGGAAGAGGAA...GAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp GGAAATGTAGTCCTGGTCGCTCAGGTAATTAGCGCAGAGTCCCTAGTGGGAGTGCGGGAGGTGATCTGGTaGGACAAACGTTCCGTCTGC +
Preference number: 4 (lower is better)
Translates to: GNVVLVAQVISAESLVGVREVIW*DKRSVC
Trigger: GCAGACGGAACGTTTGTCCCACCAGATCACCTCCCG...CACTCCCACTAGGGACTCTGCGCTAATTACCTGAGCGACCAGGACTACATTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp GCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGTCCCAGCATGTGGCTCAACTGATTaGTCACCAACCCCACATATT +
Preference number: 4 (lower is better)
Translates to: AGPEVQGGALSRQLQVPACGSTD*SPTPHI
Trigger: AATATGTGGGGTTGGTGACCAATCAGTTGAGCCACA...TGCTGGGACTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGACCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp CAGGTAATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAATTCGGCTTTGGCTTTaGATCCGGAGACTGCGGCTG +
Preference number: 4 (lower is better)
Translates to: QVISAESLVGVILTPTGKIRLWL*IRRLRL
Trigger: CAGCCGCAGTCTCCGGATCCAAAGCCAAAGCCGAAT...TTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAATTACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
3UTR CAA 72 bp GATGTGGCTCAACTGATTGGTCACCAACCCCACATATaGGTCGATCTGAGCCTGGTGCTGCCGGTACAGCAG +
Preference number: 4 (lower is better)
Translates to: DVAQLIGHQPHI*VDLSLVLPVQQ
Trigger: CTGCTGTACCGGCAGCACCAGGCTCAGATCGACCAATATGTGGGGTTGGTGACCAATCAGTTGAGCCACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
CDS-3UTR TCA 90 bp CAGGGCTCCGGTCCCTGGGATTTTAGCTCGGATCTTAGCTTTGATGTGGCTCAATGTGAAGACCACTCCTaGCGTCCTCGTGTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: QGSGPWDFSSDLSFDVAQCEDHS*RPRVLP
Trigger: TGGAAGGACACGAGGACGTCAGGAGTGGTCTTCACA...TTGAGCCACATCAAAGCTAAGATCCGAGCTAAAATCCCAGGGACCGGAGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
CDS-3UTR TCA 90 bp ATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCTTGATGTGGCTCAACTaGTTGGTCACCAACCCCACA +
Preference number: 4 (lower is better)
Translates to: ISAESLVGVILTPTGKRLLMWLN*LVTNPT
Trigger: TGTGGGGTTGGTGACCAATCAGTTGAGCCACATCAA...GAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp GTCGCTCAGGTAATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCAATTCCCGGGCTGTGTaGAGCTCTCGAAAATCAGAG +
Preference number: 4 (lower is better)
Translates to: VAQVISAESLVGVILTPTNSRAV*SSRKSE
Trigger: CTCTGATTTTCGAGAGCTGCACACAGCCCGGGAATT...GGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAATTACCTGAGCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp AGCTCGGATCTTAGCTTTGATGTGGCTCAACTGATTGGTCACCAACCCCACATAGGCTCAGGCTGGGGATaGTCTCCAAGCTGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: SSDLSFDVAQLIGHQPHIGSGWG*SPSCRP
Trigger: TGGGCGACAGCTTGGAGAGCATCCCCAGCCTGAGCC...TATGTGGGGTTGGTGACCAATCAGTTGAGCCACATCAAAGCTAAGATCCGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
CDS-3UTR GCA 90 bp GGAAATGTAGTCCTGGTCGCTCAGGTAATTAGCGCAGAGTCCCTAGTGGGAGTGTCCAGTGGCCCCCACTaGTTTTCTTCCTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: GNVVLVAQVISAESLVGVSSGPH*FSSSSS
Trigger: GCTGGAAGAGGAAGAAAAGCAGTGGGGGCCACTGGA...CACTCCCACTAGGGACTCTGCGCTAATTACCTGAGCGACCAGGACTACATTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp GTCGCTCAGGTAATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCATTCTAATTGGTCCGTaGTATCGAGGCACTGTCCCC +
Preference number: 4 (lower is better)
Translates to: VAQVISAESLVGVILTPTILIGP*YRGTVP
Trigger: GGGGACAGTGCCTCGATAGCACGGACCAATTAGAAT...GGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAATTACCTGAGCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp GCTGCAGAGGCCAGGGCTCCGGTCCCTGGGATTTTAGCTCGGATCTTAGCTTTGCATCTTCATACACGTTaGTTACCTAGAAGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: AAEARAPVPGILARILALHLHTR*LPRRRG
Trigger: GCCACGCCTTCTAGGTAAGCAACGTGTATGAAGATG...CAAAGCTAAGATCCGAGCTAAAATCCCAGGGACCGGAGCCCTGGCCTCTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591286.5
CDS-3UTR CCA 90 bp GTAATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCGTTCCCTCCTTCTGTaGAATCAGGAGTTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: VISAESLVGVILTPTGKRRSLLL*NQELRR
Trigger: CCTCCTCAACTCCTGATTCCACAGAAGGAGGGAACG...CCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAATTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp GTAATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGTTCCTCTTCCAGCAATaGCTCTTCGGGCCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: VISAESLVGVILTPTGKRFLFQQ*LFGPRV
Trigger: AACTCTGGGCCCGAAGAGCCATTGCTGGAAGAGGAA...CCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAATTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CCA 90 bp CCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGTCGGACAATTCCAAAATTaGAACCGTCTTGTAAACAGC +
Preference number: 4 (lower is better)
Translates to: PAAGPEVQGGALSRQLQVGQFQN*NRLVNS
Trigger: GCTGTTTACAAGACGGTTCCAATTTTGGAATTGTCC...GACTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245923.9
ENST00000587597.5
ENST00000590526.5
CDS-3UTR CCA 90 bp ATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGTTCTCATTCGGCTTTaGCTTTGGATCCGGAGACTG +
Preference number: 4 (lower is better)
Translates to: ISAESLVGVILTPTGKRLVLIRL*LWIRRL
Trigger: CAGTCTCCGGATCCAAAGCCAAAGCCGAATGAGAAC...GAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp GATTTTAGCTCGGATCTTAGCTTTGATGTGGCTCAACTGATTGGTCACCAACCCTCCCAGAGCCCGGACTaGGCTGGGGAGTCAAGACCT +
Preference number: 4 (lower is better)
Translates to: DFSSDLSFDVAQLIGHQPSQSPD*AGESRP
Trigger: AGGTCTTGACTCCCCAGCTCAGTCCGGGCTCTGGGA...GGGTTGGTGACCAATCAGTTGAGCCACATCAAAGCTAAGATCCGAGCTAAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
CDS-3UTR TCA 90 bp GGAAATGTAGTCCTGGTCGCTCAGGTAATTAGCGCAGAGTCCCTAGTGGGAGTGACAGCAGGGGGATGGTaGATAGACCAATCACTCCCA +
Preference number: 4 (lower is better)
Translates to: GNVVLVAQVISAESLVGVTAGGW*IDQSLP
Trigger: TGGGAGTGATTGGTCTATTCACCATCCCCCTGCTGT...CACTCCCACTAGGGACTCTGCGCTAATTACCTGAGCGACCAGGACTACATTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp CAGGTAATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAATTGATGTGGCTCAACTaGTTGGTCACCAACCCCACA +
Preference number: 4 (lower is better)
Translates to: QVISAESLVGVILTPTGKLMWLN*LVTNPT
Trigger: TGTGGGGTTGGTGACCAATCAGTTGAGCCACATCAA...TTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAATTACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp GTAATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGAATTCCCGGGCTGTGTaGAGCTCTCGAAAATCAGAG +
Preference number: 4 (lower is better)
Translates to: VISAESLVGVILTPTGKRNSRAV*SSRKSE
Trigger: CTCTGATTTTCGAGAGCTGCACACAGCCCGGGAATT...CCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAATTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp GTAATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGATTCTAATTGGTCCGTaGTATCGAGGCACTGTCCCC +
Preference number: 4 (lower is better)
Translates to: VISAESLVGVILTPTGKRILIGP*YRGTVP
Trigger: GGGGACAGTGCCTCGATAGCACGGACCAATTAGAAT...CCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAATTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR GCA 90 bp ATCACTCCCAGAATGAGAAGAGTCAAACCATTGAAGATGGCACCCACGAAGGTCTTTGGATCCGGAGACTaGGGCTGCTGCAGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: ITPRMRRVKPLKMAPTKVFGSGD*GCCRGQ
Trigger: CTGGCCTCTGCAGCAGCCGCAGTCTCCGGATCCAAA...GACCTTCGTGGGTGCCATCTTCAATGGTTTGACTCTTCTCATTCTGGGAGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591286.5
CDS-3UTR CCA 90 bp ACTCCTGACGTCCTCGTGTCCTTCCAGTACAGCAGGTCCGCCACTTTTGCCTTCCACTTTTGCCTTCTGTaGGCCAATGCAGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: TPDVLVSFQYSRSATFAFHFCLL*ANAASS
Trigger: TGAAGATGCTGCATTGGCCCACAGAAGGCAAAAGTG...GAAGGCAAAAGTGGCGGACCTGCTGTACTGGAAGGACACGAGGACGTCAGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591286.5
CDS-3UTR CCA 90 bp GAGAAGAGTCAAACCATTGAAGATGGCACCCACGAAGGTCAAGATGTAGAAGAGGGAGCTTCTTTGCAGTaGGCGAAGACCGGCAGGACC +
Preference number: 4 (lower is better)
Translates to: EKSQTIEDGTHEGQDVEEGASLQ*AKTGRT
Trigger: GGTCCTGCCGGTCTTCGCCCACTGCAAAGAAGCTCC...CTCTTCTACATCTTGACCTTCGTGGGTGCCATCTTCAATGGTTTGACTCTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591286.5
CDS-3UTR CCA 90 bp GTAATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGTGTGGCTCAACTGATTaGTCACCAACCCCACATATT +
Preference number: 4 (lower is better)
Translates to: VISAESLVGVILTPTGKRCGSTD*SPTPHI
Trigger: AATATGTGGGGTTGGTGACCAATCAGTTGAGCCACA...CCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAATTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR TCA 90 bp AGCTCGGATCTTAGCTTTGATGTGGCTCAACTGATTGGTCACCAACCCCACATAAGACCAATCACTCCTTaGGGGAATCCACGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: SSDLSFDVAQLIGHQPHIRPITP*GNPRGL
Trigger: AAGACCTCGTGGATTCCCTCAAGGAGTGATTGGTCT...TATGTGGGGTTGGTGACCAATCAGTTGAGCCACATCAAAGCTAAGATCCGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587597.5
CDS-3UTR CCA 90 bp GAGAAGAGTCAAACCATTGAAGATGGCACCCACGAAGGTCAAGATGTAGAAGAGGTTCTCATTCGGCTTTaGCTTTGGATCCGGAGACTG +
Preference number: 4 (lower is better)
Translates to: EKSQTIEDGTHEGQDVEEVLIRL*LWIRRL
Trigger: CAGTCTCCGGATCCAAAGCCAAAGCCGAATGAGAAC...CTCTTCTACATCTTGACCTTCGTGGGTGCCATCTTCAATGGTTTGACTCTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591286.5
CDS-3UTR CAA 90 bp ACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCGTCCCAGTCCTGGAATaGCAGTGGGCGAAGACCGGC +
Preference number: 5 (lower is better)
Translates to: TPHGASSGGSGSAGWCPVVPVLE*QWAKTG
Trigger: GCCGGTCTTCGCCCACTGCAATTCCAGGACTGGGAC...GACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590526.5
CDS-3UTR CAA 90 bp ACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCGTAGACGGAGCTTCTTaGCAGTGGGCGAAGACCGGC +
Preference number: 5 (lower is better)
Translates to: TPHGASSGGSGSAGWCPVVDGAS*QWAKTG
Trigger: GCCGGTCTTCGCCCACTGCAAAGAAGCTCCGTCTAC...GACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000591286.5
CDS-3UTR CAA 90 bp GACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGGTAGACGGAGCTTCTTaGCAGTGGGCGAAGACCGGC +
Preference number: 5 (lower is better)
Translates to: DTNASRRLQRRVRKCRVVVDGAS*QWAKTG
Trigger: GCCGGTCTTCGCCCACTGCAAAGAAGCTCCGTCTAC...CACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000591286.5
CDS-3UTR CAA 90 bp CAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGAAGAGGAGGGCCAGCTaGAGGGAATCCACGAGGTCT +
Preference number: 5 (lower is better)
Translates to: QRLTAPPAAGPEVQGGALKRRAS*RESTRS
Trigger: AGACCTCGTGGATTCCCTCAAGCTGGCCCTCCTCTT...CAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CAA 90 bp ACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCCATTCGGCTTTGGCTTaGGATCCGGAGACTGCGGCT +
Preference number: 5 (lower is better)
Translates to: TNASRRLQRRVRKCRVVPHSALA*DPETAA
Trigger: AGCCGCAGTCTCCGGATCCAAAGCCAAAGCCGAATG...GGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS CCA 90 bp TGTCAGGATCACCCCGTCGTCCAGGCTCCGGGGATTGGCTCAGGCTaGGGATGCTCTCCAAGCTGTCGCCCAGGCTGGGCTGAGGGTGCT +
Preference number: 5 (lower is better)
Translates to: CQDHPVVQAPGIGSG*GCSPSCRPGWAEGA
Trigger: AGCACCCTCAGCCCAGCCTGGGCGACAGCTTGGAGAGCATCCCCAGCCTGAGCCAATCCCCGGAGCCTGGACGACGGGGTGATCCTGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000589384.1
ENST00000590526.5
ENST00000591286.5
ENST00000592064.1
CDS CCA 90 bp CAGATGGTCCAACCGAAGCCTCAGGTCTTCCAGAGGGCGCTCGGATaGAGGCGCGGTGTCAGGATCACCCCGTCGTCCAGGCTCCGGGGA +
Preference number: 5 (lower is better)
Translates to: QMVQPKPQVFQRALG*RRGVRITPSSRLRG
Trigger: TCCCCGGAGCCTGGACGACGGGGTGATCCTGACACCGCGCCTCCATCCGAGCGCCCTCTGGAAGACCTGAGGCTTCGGTTGGACCATCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000589384.1
ENST00000590526.5
ENST00000591286.5
ENST00000592064.1
CDS CCA 90 bp GAAGAGTCCTCCCCGGATCCCGTTCCCCGGGCCACCCAGCCCAGATaGTCCAACCGAAGCCTCAGGTCTTCCAGAGGGCGCTCGGATGGA +
Preference number: 5 (lower is better)
Translates to: EESSPDPVPRATQPR*SNRSLRSSRGRSDG
Trigger: TCCATCCGAGCGCCCTCTGGAAGACCTGAGGCTTCGGTTGGACCATCTGGGCTGGGTGGCCCGGGGAACGGGATCCGGGGAGGACTCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000589384.1
ENST00000590526.5
ENST00000591286.5
ENST00000592064.1
CDS-3UTR CAA 90 bp CAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGAAGAGGAGGGCCAGCTaGAGGGAATCCACGAGGTCT +
Preference number: 5 (lower is better)
Translates to: QETPTPHGASSGGSGSAGKRRAS*RESTRS
Trigger: AGACCTCGTGGATTCCCTCAAGCTGGCCCTCCTCTT...CCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CAA 90 bp CTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGAAGAGGAGGGCCAGCTaGAGGGAATCCACGAGGTCT +
Preference number: 5 (lower is better)
Translates to: LTAPPAAGPEVQGGALSRKRRAS*RESTRS
Trigger: AGACCTCGTGGATTCCCTCAAGCTGGCCCTCCTCTT...CCTAGACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CAA 90 bp TCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCCATTCGGCTTTGGCTTaGGATCCGGAGACTGCGGCT +
Preference number: 5 (lower is better)
Translates to: SRRLQRRVRKCRVVPCLGHSALA*DPETAA
Trigger: AGCCGCAGTCTCCGGATCCAAAGCCAAAGCCGAATG...GCCTAGACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CAA 90 bp GTCCCAGCAGGCCCCGCGGCCAAGGTGCCTCGTCTTTCCTGGACTCCTGGAGCATGCAAAGCCCCGGCGTaGGGGCTAGTAGCATCCAGG +
Preference number: 5 (lower is better)
Translates to: VPAGPAAKVPRLSWTPGACKAPA*GLVASR
Trigger: CCTGGATGCTACTAGCCCCAACGCCGGGGCTTTGCA...TGCTCCAGGAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGCCTGCTGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS CCA 90 bp CCAGAGTTCGAATCTCGCGATCGGGATGGGGACGGAGTACCGGCCTaGGGTGTCCCAGAGCCCGGACTGAGCTGGGGAGTCAAGACCTCG +
Preference number: 5 (lower is better)
Translates to: PEFESRDRDGDGVPA*GVPEPGLSWGVKTS
Trigger: CGAGGTCTTGACTCCCCAGCTCAGTCCGGGCTCTGGGACACCCCAGGCCGGTACTCCGTCCCCATCCCGATCGCGAGATTCGAACTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
ENST00000592064.1
CDS CCA 90 bp CAGCAATGGCTCTTCGGGCCCAGAGTTCGAATCTCGCGATCGGGATaGGGACGGAGTACCGGCCTGGGGTGTCCCAGAGCCCGGACTGAG +
Preference number: 5 (lower is better)
Translates to: QQWLFGPRVRISRSG*GRSTGLGCPRARTE
Trigger: CTCAGTCCGGGCTCTGGGACACCCCAGGCCGGTACTCCGTCCCCATCCCGATCGCGAGATTCGAACTCTGGGCCCGAAGAGCCATTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
ENST00000592064.1
CDS-3UTR CAA 90 bp TCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCCACCAACCCCACATATaGGTCGATCTGAGCCTGGTG +
Preference number: 5 (lower is better)
Translates to: SRRLQRRVRKCRVVPCLGHQPHI*VDLSLV
Trigger: CACCAGGCTCAGATCGACCAATATGTGGGGTTGGTG...GCCTAGACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CAA 90 bp ACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCACCAACCCCACATATaGGTCGATCTGAGCCTGGTG +
Preference number: 5 (lower is better)
Translates to: TPTPHGASSGGSGSAGWCHQPHI*VDLSLV
Trigger: CACCAGGCTCAGATCGACCAATATGTGGGGTTGGTG...GCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CAA 90 bp CATCCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCCATTCGGCTTTGGCTTaGGATCCGGAGACTGCGGCT +
Preference number: 5 (lower is better)
Translates to: HPGDTNASRRLQRRVRKCHSALA*DPETAA
Trigger: AGCCGCAGTCTCCGGATCCAAAGCCAAAGCCGAATG...GCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGGATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CAA 90 bp ACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCCAATCTGTTGGGTTCTaGGGGTTCTTCGTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: TNASRRLQRRVRKCRVVPQSVGF*GFFVFQ
Trigger: CTGGAAGACGAAGAACCCCAAGAACCCAACAGATTG...GGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CAA 90 bp CAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGCCTGTCTCCAATCTGTaGGGTTCTTGGGGTTCTTCG +
Preference number: 5 (lower is better)
Translates to: QETPTPHGASSGGSGSAGPVSNL*GSWGSS
Trigger: CGAAGAACCCCAAGAACCCAACAGATTGGAGACAGG...CCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CAA 90 bp GACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGTGCTTCTCGGGGATTTaGCCCACTTCAGTAGAACCC +
Preference number: 5 (lower is better)
Translates to: DTNASRRLQRRVRKCRVVCFSGI*PTSVEP
Trigger: GGGTTCTACTGAAGTGGGCAAAATCCCCGAGAAGCA...CACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245923.9
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
CDS-3UTR CAA 90 bp CTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGTGCTTCTCGGGGATTTaGCCCACTTCAGTAGAACCC +
Preference number: 5 (lower is better)
Translates to: LTAPPAAGPEVQGGALSRCFSGI*PTSVEP
Trigger: GGGTTCTACTGAAGTGGGCAAAATCCCCGAGAAGCA...CCTAGACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245923.9
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
CDS-3UTR CAA 90 bp CAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGCGTTCTCATTCGGCTTaGGCTTTGGATCCGGAGACT +
Preference number: 5 (lower is better)
Translates to: QETPTPHGASSGGSGSAGRSHSA*ALDPET
Trigger: AGTCTCCGGATCCAAAGCCAAAGCCGAATGAGAACG...CCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CAA 90 bp CTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGTGCAAAGCCCCGGCGTaGGGGCTAGTAGCATCCAGG +
Preference number: 5 (lower is better)
Translates to: LQRRVRKCRVVPCLGNYKCKAPA*GLVASR
Trigger: CCTGGATGCTACTAGCCCCAACGCCGGGGCTTTGCA...CTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CAA 90 bp CCGGAGACTGCGGCTGCTGCAGAGGCCAGGGCTCCGGTCCCTGGGATTTTAGCTGCAGGTCCGCCACTTTaGCCTTCTGTGGGCCAATGC +
Preference number: 5 (lower is better)
Translates to: PETAAAAEARAPVPGILAAGPPL*PSVGQC
Trigger: GCATTGGCCCACAGAAGGCAAAAGTGGCGGACCTGC...AGCTAAAATCCCAGGGACCGGAGCCCTGGCCTCTGCAGCAGCCGCAGTCTCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591286.5
CDS-3UTR CAA 90 bp CATCCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCCCTGTCTCCAATCTGTaGGGTTCTTGGGGTTCTTCG +
Preference number: 5 (lower is better)
Translates to: HPGDTNASRRLQRRVRKCPVSNL*GSWGSS
Trigger: CGAAGAACCCCAAGAACCCAACAGATTGGAGACAGG...GCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CAA 90 bp CCGGAGACTGCGGCTGCTGCAGAGGCCAGGGCTCCGGTCCCTGGGATTTTAGCTAAGAGGAGGGCCAGCTaGAGGGAATCCACGAGGTCT +
Preference number: 5 (lower is better)
Translates to: PETAAAAEARAPVPGILAKRRAS*RESTRS
Trigger: AGACCTCGTGGATTCCCTCAAGCTGGCCCTCCTCTT...AGCTAAAATCCCAGGGACCGGAGCCCTGGCCTCTGCAGCAGCCGCAGTCTCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591286.5
CDS-3UTR CAA 90 bp GTAGCATCCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAACACCAACCCCACATATaGGTCGATCTGAGCCTGGTG +
Preference number: 5 (lower is better)
Translates to: VASRRHQRLTAPPAAGPEHQPHI*VDLSLV
Trigger: CACCAGGCTCAGATCGACCAATATGTGGGGTTGGTG...TTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGGATGCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CAA 90 bp CGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGTCCCAGCAGTGCAAAGCCCCGGCGTaGGGGCTAGTAGCATCCAGG +
Preference number: 5 (lower is better)
Translates to: RVRKCRVVPCLGNYKSQQCKAPA*GLVASR
Trigger: CCTGGATGCTACTAGCCCCAACGCCGGGGCTTTGCA...CTGCTGGGACTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGACCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CAA 90 bp GGGGCAGGCGTCCTGCGGGCAGAGACACCGTTCTCATTCGGCTTTGGCTTTGGATGCAAAGCCCCGGCGTaGGGGCTAGTAGCATCCAGG +
Preference number: 5 (lower is better)
Translates to: GAGVLRAETPFSFGFGFGCKAPA*GLVASR
Trigger: CCTGGATGCTACTAGCCCCAACGCCGGGGCTTTGCA...TCCAAAGCCAAAGCCGAATGAGAACGGTGTCTCTGCCCGCAGGACGCCTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
CDS TCA 90 bp GAGCCCGGACTGAGCTGGGGAGTCAAGACCTCGGGCGATGAGGGCTaGGCAAGTCGGAGTCGTAGGTCCAGTTCTTCCCCAGCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: EPGLSWGVKTSGDEG*ASRSRRSSSSPASP
Trigger: AGGAGAAGCTGGGGAAGAACTGGACCTACGACTCCGACTTGCTCAGCCCTCATCGCCCGAGGTCTTGACTCCCCAGCTCAGTCCGGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
ENST00000592064.1
CDS-3UTR CAA 90 bp GTCCCAGCAGGCCCCGCGGCCAAGGTGCCTCGTCTTTCCTGGACTCCTGGAGCACCTGTCTCCAATCTGTaGGGTTCTTGGGGTTCTTCG +
Preference number: 5 (lower is better)
Translates to: VPAGPAAKVPRLSWTPGAPVSNL*GSWGSS
Trigger: CGAAGAACCCCAAGAACCCAACAGATTGGAGACAGG...TGCTCCAGGAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGCCTGCTGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CAA 90 bp ATCCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCATGCTTCTCGGGGATTTaGCCCACTTCAGTAGAACCC +
Preference number: 5 (lower is better)
Translates to: IQETPTPHGASSGGSGSACFSGI*PTSVEP
Trigger: GGGTTCTACTGAAGTGGGCAAAATCCCCGAGAAGCA...TGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245923.9
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
CDS-3UTR CAA 90 bp CCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGAGAAGAGTCAAACCATaGAAGATGGCACCCACGAAG +
Preference number: 5 (lower is better)
Translates to: PGDTNASRRLQRRVRKCRRRVKP*KMAPTK
Trigger: CTTCGTGGGTGCCATCTTCAATGGTTTGACTCTTCT...CCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CAA 90 bp GACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGAGAAGAGTCAAACCATaGAAGATGGCACCCACGAAG +
Preference number: 5 (lower is better)
Translates to: DTNASRRLQRRVRKCRVVRRVKP*KMAPTK
Trigger: CTTCGTGGGTGCCATCTTCAATGGTTTGACTCTTCT...CACCACCCTGCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CAA 90 bp CCGGAGACTGCGGCTGCTGCAGAGGCCAGGGCTCCGGTCCCTGGGATTTTAGCTCACCAACCCCACATATaGGTCGATCTGAGCCTGGTG +
Preference number: 5 (lower is better)
Translates to: PETAAAAEARAPVPGILAHQPHI*VDLSLV
Trigger: CACCAGGCTCAGATCGACCAATATGTGGGGTTGGTG...AGCTAAAATCCCAGGGACCGGAGCCCTGGCCTCTGCAGCAGCCGCAGTCTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
CDS-3UTR CAA 90 bp GTCGCTCAGGTAATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCTCCAGGCTCCGGGGATaGGCTCAGGCTGGGGATGCT +
Preference number: 5 (lower is better)
Translates to: VAQVISAESLVGVILTPTSRLRG*AQAGDA
Trigger: AGCATCCCCAGCCTGAGCCAATCCCCGGAGCCTGGA...GGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAATTACCTGAGCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CAA 90 bp TCCCAGCAGGCCCCGCGGCCAAGGTGCCTCGTCTTTCCTGGACTCCTGGAGCAGCAATCTGTTGGGTTCTaGGGGTTCTTCGTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: SQQAPRPRCLVFPGLLEQQSVGF*GFFVFQ
Trigger: CTGGAAGACGAAGAACCCCAAGAACCCAACAGATTG...CTGCTCCAGGAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGCCTGCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CAA 90 bp GGGGCTAGTAGCATCCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGAGAAGAGTCAAACCATaGAAGATGGCACCCACGAAG +
Preference number: 5 (lower is better)
Translates to: GASSIQETPTPHGASSGGRRVKP*KMAPTK
Trigger: CTTCGTGGGTGCCATCTTCAATGGTTTGACTCTTCT...CCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGGATGCTACTAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CAA 90 bp GTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGAGGAGCACCAACCCCACATATaGGTCGATCTGAGCCTGGTG +
Preference number: 5 (lower is better)
Translates to: VPSGSDPDTHREKARAEEHQPHI*VDLSLV
Trigger: CACCAGGCTCAGATCGACCAATATGTGGGGTTGGTG...CTCCTCGGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CAA 90 bp AGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGAGCATTCGGCTTTGGCTTaGGATCCGGAGACTGCGGCT +
Preference number: 5 (lower is better)
Translates to: RVPSGSDPDTHREKARAEHSALA*DPETAA
Trigger: AGCCGCAGTCTCCGGATCCAAAGCCAAAGCCGAATG...CTCGGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CAA 90 bp GTCCCAGCAGGCCCCGCGGCCAAGGTGCCTCGTCTTTCCTGGACTCCTGGAGCAAGAAGAGTCAAACCATaGAAGATGGCACCCACGAAG +
Preference number: 5 (lower is better)
Translates to: VPAGPAAKVPRLSWTPGARRVKP*KMAPTK
Trigger: CTTCGTGGGTGCCATCTTCAATGGTTTGACTCTTCT...TGCTCCAGGAGTCCAGGAAAGACGAGGCACCTTGGCCGCGGGGCCTGCTGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CAA 90 bp GTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGAGGAGCGTTCTCATTCGGCTTaGGCTTTGGATCCGGAGACT +
Preference number: 5 (lower is better)
Translates to: VPSGSDPDTHREKARAEERSHSA*ALDPET
Trigger: AGTCTCCGGATCCAAAGCCAAAGCCGAATGAGAACG...CTCCTCGGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CAA 90 bp CTCCAGCGGCGGGTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGCGTTCTCATTCGGCTTaGGCTTTGGATCCGGAGACT +
Preference number: 5 (lower is better)
Translates to: LQRRVRKCRVVPCLGNYKRSHSA*ALDPET
Trigger: AGTCTCCGGATCCAAAGCCAAAGCCGAATGAGAACG...CTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGACCCGCCGCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CAA 90 bp TCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGAGGAGGCGTTCTCATTCGGCTTaGGCTTTGGATCCGGAGACT +
Preference number: 5 (lower is better)
Translates to: SLVGVILTPTGKRLGPRRRSHSA*ALDPET
Trigger: AGTCTCCGGATCCAAAGCCAAAGCCGAATGAGAACG...CCTCCTCGGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS TCA 90 bp AAGGTCAGGGTCAGCAGAGCCCACCGGGAATTCCCTCTCATGCTGTaGATTTACCCAACAGTCGCCCTCCCACCCCCTAGCCATGCAGAG +
Preference number: 5 (lower is better)
Translates to: KVRVSRAHREFPLML*IYPTVALPPPSHAE
Trigger: CTCTGCATGGCTAGGGGGTGGGAGGGCGACTGTTGGGTAAATTCACAGCATGAGAGGGAATTCCCGGTGGGCTCTGCTGACCCTGACCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591789.1
CDS CCA 90 bp AGCAGGTCCGCCACTAGAAGGCGTGGCTCCACCGTGAATTCTAATTaGTCCGTGCTATCGAGGCACTGTCCCCTTACTGGCTCTCGCTCC +
Preference number: 5 (lower is better)
Translates to: SRSATRRRGSTVNSN*SVLSRHCPLTGSRS
Trigger: GGAGCGAGAGCCAGTAAGGGGACAGTGCCTCGATAGCACGGACCAATTAGAATTCACGGTGGAGCCACGCCTTCTAGTGGCGGACCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344680.8
CDS-3UTR CAA 90 bp TGGTCACCAACCCCACATATTGGTCGATCTGAGCCTGGTGCTGCCGGTACAGCAGTAGACGGAGCTTCTTaGCAGTGGGCGAAGACCGGC +
Preference number: 5 (lower is better)
Translates to: WSPTPHIGRSEPGAAGTAVDGAS*QWAKTG
Trigger: GCCGGTCTTCGCCCACTGCAAAGAAGCTCCGTCTAC...TGCTGTACCGGCAGCACCAGGCTCAGATCGACCAATATGTGGGGTTGGTGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
CDS-3UTR CAA 90 bp CATCCAGGAGACACCAACGCCTCACGGCGCCTCCAGCGGCGGGTCCGGAAGTGCGGGACAATTCCAAAATaGGAACCGTCTTGTAAACAG +
Preference number: 5 (lower is better)
Translates to: HPGDTNASRRLQRRVRKCGTIPK*EPSCKQ
Trigger: CTGTTTACAAGACGGTTCCAATTTTGGAATTGTCCC...GCACTTCCGGACCCGCCGCTGGAGGCGCCGTGAGGCGTTGGTGTCTCCTGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245923.9
ENST00000587597.5
ENST00000590526.5
CDS-3UTR CAA 90 bp CAGGTAATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAATGCAAAGCCCCGGCGTaGGGGCTAGTAGCATCCAGG +
Preference number: 5 (lower is better)
Translates to: QVISAESLVGVILTPTGKCKAPA*GLVASR
Trigger: CCTGGATGCTACTAGCCCCAACGCCGGGGCTTTGCA...TTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAATTACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CAA 90 bp GTAATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGTGCAAAGCCCCGGCGTaGGGGCTAGTAGCATCCAGG +
Preference number: 5 (lower is better)
Translates to: VISAESLVGVILTPTGKRCKAPA*GLVASR
Trigger: CCTGGATGCTACTAGCCCCAACGCCGGGGCTTTGCA...CCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAATTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CAA 90 bp CAGGTAATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAGTAGACGGAGCTTCTTaGCAGTGGGCGAAGACCGGC +
Preference number: 5 (lower is better)
Translates to: QVISAESLVGVILTPTGKVDGAS*QWAKTG
Trigger: GCCGGTCTTCGCCCACTGCAAAGAAGCTCCGTCTAC...TTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAATTACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000591286.5
CDS-3UTR CAA 90 bp GTCCGGAAGTGCAGGGTGGTGCCCTGTCTAGGCAACTACAAGTCCCAGCAGGCCCAATCTGTTGGGTTCTaGGGGTTCTTCGTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: VRKCRVVPCLGNYKSQQAQSVGF*GFFVFQ
Trigger: CTGGAAGACGAAGAACCCCAAGAACCCAACAGATTG...GGCCTGCTGGGACTTGTAGTTGCCTAGACAGGGCACCACCCTGCACTTCCGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CAA 90 bp GGGGCAGGCGTCCTGCGGGCAGAGACACCGTTCTCATTCGGCTTTGGCTTTGGACAATCTGTTGGGTTCTaGGGGTTCTTCGTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: GAGVLRAETPFSFGFGFGQSVGF*GFFVFQ
Trigger: CTGGAAGACGAAGAACCCCAAGAACCCAACAGATTG...TCCAAAGCCAAAGCCGAATGAGAACGGTGTCTCTGCCCGCAGGACGCCTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
CDS-3UTR CAA 90 bp ATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCCATTCGGCTTTGGCTTaGGATCCGGAGACTGCGGCT +
Preference number: 5 (lower is better)
Translates to: ISAESLVGVILTPTGKRLHSALA*DPETAA
Trigger: AGCCGCAGTCTCCGGATCCAAAGCCAAAGCCGAATG...GAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS CCA 90 bp TCCAGTTCTTCCCCAGCTTCTCCTGTCTCCAATCTGTTGGGTTCTTaGGGTTCTTCGTCTTCCAGCGGGGTGGAGCTGCTGGTGGAAGAG +
Preference number: 5 (lower is better)
Translates to: SSSSPASPVSNLLGS*GSSSSSGVELLVEE
Trigger: CTCTTCCACCAGCAGCTCCACCCCGCTGGAAGACGAAGAACCCCAAGAACCCAACAGATTGGAGACAGGAGAAGCTGGGGAAGAACTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
ENST00000592064.1
CDS CCA 90 bp TCCATAGCTGTTCCTAGAAGGCGTGGCTCCACCGTGAATTCTAATTaGTCCGTGCTATCGAGGCACTGTCCCCTTACTGGCTCTCGCTCC +
Preference number: 5 (lower is better)
Translates to: SIAVPRRRGSTVNSN*SVLSRHCPLTGSRS
Trigger: GGAGCGAGAGCCAGTAAGGGGACAGTGCCTCGATAGCACGGACCAATTAGAATTCACGGTGGAGCCACGCCTTCTAGGAACAGCTATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245923.9
ENST00000587597.5
ENST00000590526.5
CDS CCA 90 bp ACACGTTGCTTACCTAGAAGGCGTGGCTCCACCGTGAATTCTAATTaGTCCGTGCTATCGAGGCACTGTCCCCTTACTGGCTCTCGCTCC +
Preference number: 5 (lower is better)
Translates to: TRCLPRRRGSTVNSN*SVLSRHCPLTGSRS
Trigger: GGAGCGAGAGCCAGTAAGGGGACAGTGCCTCGATAGCACGGACCAATTAGAATTCACGGTGGAGCCACGCCTTCTAGGTAAGCAACGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591286.5
ENST00000592064.1
CDS-3UTR CAA 90 bp GCTGCAGAGGCCAGGGCTCCGGTCCCTGGGATTTTAGCTCGGATCTTAGCTTTGCAATCTGTTGGGTTCTaGGGGTTCTTCGTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: AAEARAPVPGILARILALQSVGF*GFFVFQ
Trigger: CTGGAAGACGAAGAACCCCAAGAACCCAACAGATTG...CAAAGCTAAGATCCGAGCTAAAATCCCAGGGACCGGAGCCCTGGCCTCTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
CDS-3UTR CAA 90 bp TGGTCACCAACCCCACATATTGGTCGATCTGAGCCTGGTGCTGCCGGTACAGCACCTGTCTCCAATCTGTaGGGTTCTTGGGGTTCTTCG +
Preference number: 5 (lower is better)
Translates to: WSPTPHIGRSEPGAAGTAPVSNL*GSWGSS
Trigger: CGAAGAACCCCAAGAACCCAACAGATTGGAGACAGG...TGCTGTACCGGCAGCACCAGGCTCAGATCGACCAATATGTGGGGTTGGTGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
CDS-3UTR CAA 90 bp CGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGGCTCGGGCCGGGACAATTCCAAAATaGGAACCGTCTTGTAAACAG +
Preference number: 5 (lower is better)
Translates to: RRVPSGSDPDTHREKARAGTIPK*EPSCKQ
Trigger: CTGTTTACAAGACGGTTCCAATTTTGGAATTGTCCC...GGCCCGAGCCTTTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245923.9
ENST00000587597.5
ENST00000590526.5
CDS-3UTR CAA 90 bp GTCGCTCAGGTAATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCTGCTTCTCGGGGATTTaGCCCACTTCAGTAGAACCC +
Preference number: 5 (lower is better)
Translates to: VAQVISAESLVGVILTPTCFSGI*PTSVEP
Trigger: GGGTTCTACTGAAGTGGGCAAAATCCCCGAGAAGCA...GGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAATTACCTGAGCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245923.9
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
CDS-3UTR CAA 90 bp GTCGCTCAGGTAATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCCGTTCTCATTCGGCTTaGGCTTTGGATCCGGAGACT +
Preference number: 5 (lower is better)
Translates to: VAQVISAESLVGVILTPTRSHSA*ALDPET
Trigger: AGTCTCCGGATCCAAAGCCAAAGCCGAATGAGAACG...GGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAATTACCTGAGCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CAA 90 bp ACTGATTGGTCACCAACCCCACATATTGGTCGATCTGAGCCTGGTGCTGCCGGTCGTTCTCATTCGGCTTaGGCTTTGGATCCGGAGACT +
Preference number: 5 (lower is better)
Translates to: TDWSPTPHIGRSEPGAAGRSHSA*ALDPET
Trigger: AGTCTCCGGATCCAAAGCCAAAGCCGAATGAGAACG...ACCGGCAGCACCAGGCTCAGATCGACCAATATGTGGGGTTGGTGACCAATCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587597.5
ENST00000591286.5
CDS-3UTR CAA 90 bp GGAAATGTAGTCCTGGTCGCTCAGGTAATTAGCGCAGAGTCCCTAGTGGGAGTGCCTGTCTCCAATCTGTaGGGTTCTTGGGGTTCTTCG +
Preference number: 5 (lower is better)
Translates to: GNVVLVAQVISAESLVGVPVSNL*GSWGSS
Trigger: CGAAGAACCCCAAGAACCCAACAGATTGGAGACAGG...CACTCCCACTAGGGACTCTGCGCTAATTACCTGAGCGACCAGGACTACATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
CDS-3UTR CAA 90 bp CAGGTAATTAGCGCAGAGTCCCTAGTGGGAGTGATCCTGACACCCACCGGGAAAAGAAGAGTCAAACCATaGAAGATGGCACCCACGAAG +
Preference number: 5 (lower is better)
Translates to: QVISAESLVGVILTPTGKRRVKP*KMAPTK
Trigger: CTTCGTGGGTGCCATCTTCAATGGTTTGACTCTTCT...TTTCCCGGTGGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAATTACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000430715.6
ENST00000590526.5
ENST00000591286.5
CDS TCA 90 bp AGCATCTTCATACACGTTGCTTACCTAGAAGGCGTGGCTCCACCGTaGATTCTAATTGGTCCGTGCTATCGAGGCACTGTCCCCTTACTG +
Preference number: 5 (lower is better)
Translates to: SIFIHVAYLEGVAPP*ILIGPCYRGTVPLL
Trigger: CAGTAAGGGGACAGTGCCTCGATAGCACGGACCAATTAGAATTCACGGTGGAGCCACGCCTTCTAGGTAAGCAACGTGTATGAAGATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591286.5
ENST00000592064.1
CDS GCA 90 bp GCCACTTTTGCCTTCTGTGGGCCAATGCAGCATCTTCATACACGTTaGTTACCTAGAAGGCGTGGCTCCACCGTGAATTCTAATTGGTCC +
Preference number: 5 (lower is better)
Translates to: ATFAFCGPMQHLHTR*LPRRRGSTVNSNWS
Trigger: GGACCAATTAGAATTCACGGTGGAGCCACGCCTTCTAGGTAAGCAACGTGTATGAAGATGCTGCATTGGCCCACAGAAGGCAAAAGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591286.5
CDS GCA 90 bp TCACCTTTTGCCTTCTGTGGGCCAATGCAGCATCTTCATACACGTTaGTTACCTAGAAGGCGTGGCTCCACCGTGAATTCTAATTGGTCC +
Preference number: 5 (lower is better)
Translates to: SPFAFCGPMQHLHTR*LPRRRGSTVNSNWS
Trigger: GGACCAATTAGAATTCACGGTGGAGCCACGCCTTCTAGGTAAGCAACGTGTATGAAGATGCTGCATTGGCCCACAGAAGGCAAAAGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592064.1
CDS-3UTR CAA 90 bp GGAAATGTAGTCCTGGTCGCTCAGGTAATTAGCGCAGAGTCCCTAGTGGGAGTGGGGACAATTCCAAAATaGGAACCGTCTTGTAAACAG +
Preference number: 5 (lower is better)
Translates to: GNVVLVAQVISAESLVGVGTIPK*EPSCKQ
Trigger: CTGTTTACAAGACGGTTCCAATTTTGGAATTGTCCC...CACTCCCACTAGGGACTCTGCGCTAATTACCTGAGCGACCAGGACTACATTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245923.9
ENST00000587597.5
ENST00000590526.5
CDS GCA 90 bp CCCTTTAATTCAAAATCCTCTCACCTTTTGCCTTCTGTGGGCCAATaGAGCATCTTCATACACGTTGCTTACCTAGAAGGCGTGGCTCCA +
Preference number: 5 (lower is better)
Translates to: PFNSKSSHLLPSVGQ*SIFIHVAYLEGVAP
Trigger: TGGAGCCACGCCTTCTAGGTAAGCAACGTGTATGAAGATGCTGCATTGGCCCACAGAAGGCAAAAGGTGAGAGGATTTTGAATTAAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592064.1
CDS CCA 72 bp CACCCCGTCGTCCAGGCTCCGGGGATTGGCTCAGGCTaGGGATGCTCTCCAAGCTGTCGCCCAGGCTGGGCT +
Preference number: 6 (lower is better)
Translates to: HPVVQAPGIGSG*GCSPSCRPGWA
Trigger: AGCCCAGCCTGGGCGACAGCTTGGAGAGCATCCCCAGCCTGAGCCAATCCCCGGAGCCTGGACGACGGGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000589384.1
ENST00000590526.5
ENST00000591286.5
ENST00000592064.1
CDS CCA 72 bp TCCCCGGATCCCGTTCCCCGGGCCACCCAGCCCAGATaGTCCAACCGAAGCCTCAGGTCTTCCAGAGGGCGC +
Preference number: 6 (lower is better)
Translates to: SPDPVPRATQPR*SNRSLRSSRGR
Trigger: GCGCCCTCTGGAAGACCTGAGGCTTCGGTTGGACCATCTGGGCTGGGTGGCCCGGGGAACGGGATCCGGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000589384.1
ENST00000590526.5
ENST00000591286.5
ENST00000592064.1
CDS CCA 72 bp CAACCGAAGCCTCAGGTCTTCCAGAGGGCGCTCGGATaGAGGCGCGGTGTCAGGATCACCCCGTCGTCCAGG +
Preference number: 6 (lower is better)
Translates to: QPKPQVFQRALG*RRGVRITPSSR
Trigger: CCTGGACGACGGGGTGATCCTGACACCGCGCCTCCATCCGAGCGCCCTCTGGAAGACCTGAGGCTTCGGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000589384.1
ENST00000590526.5
ENST00000591286.5
ENST00000592064.1
CDS CCA 72 bp CTCTTCGGGCCCAGAGTTCGAATCTCGCGATCGGGATaGGGACGGAGTACCGGCCTGGGGTGTCCCAGAGCC +
Preference number: 6 (lower is better)
Translates to: LFGPRVRISRSG*GRSTGLGCPRA
Trigger: GGCTCTGGGACACCCCAGGCCGGTACTCCGTCCCCATCCCGATCGCGAGATTCGAACTCTGGGCCCGAAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
ENST00000592064.1
CDS CCA 72 bp TCAGGCTGGGGATGCTCTCCAAGCTGTCGCCCAGGCTaGGCTGAGGGTGCTGGTCTCGTGGTTCCGAGACTG +
Preference number: 6 (lower is better)
Translates to: SGWGCSPSCRPG*AEGAGLVVPRL
Trigger: CAGTCTCGGAACCACGAGACCAGCACCCTCAGCCCAGCCTGGGCGACAGCTTGGAGAGCATCCCCAGCCTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000589384.1
ENST00000590526.5
ENST00000591286.5
ENST00000592064.1
CDS TCA 72 bp GGTGGGACAAACGTTCCGTCTGCTCCCGAGTCAGGGTaGGGTCCACATCCAGGTAGGCCCTGCGGGGACAAA +
Preference number: 6 (lower is better)
Translates to: GGTNVPSAPESG*GPHPGRPCGDK
Trigger: TTTGTCCCCGCAGGGCCTACCTGGATGTGGACCTCACCCTGACTCGGGAGCAGACGGAACGTTTGTCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593129.1
CDS GCA 72 bp GGAGCCCTGTCCCCCACCAGACTCCAAGTCCCCATTTaGCCCTTACGGCCTTCCCAGCTCACCCAGAATGAG +
Preference number: 6 (lower is better)
Translates to: GALSPTRLQVPI*PLRPSQLTQNE
Trigger: CTCATTCTGGGTGAGCTGGGAAGGCCGTAAGGGGCAAATGGGGACTTGGAGTCTGGTGGGGGACAGGGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591789.1
CDS TCA 72 bp CTGAGCTGGGGAGTCAAGACCTCGGGCGATGAGGGCTaGGCAAGTCGGAGTCGTAGGTCCAGTTCTTCCCCA +
Preference number: 6 (lower is better)
Translates to: LSWGVKTSGDEG*ASRSRRSSSSP
Trigger: TGGGGAAGAACTGGACCTACGACTCCGACTTGCTCAGCCCTCATCGCCCGAGGTCTTGACTCCCCAGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
ENST00000592064.1
CDS TCA 72 bp GGTGGGACAAACGTTCCGTCTGCTCCCGAGTCAGGGTaGGGTCCACATCCAGGTAGGCCCTTTACTCCCCAT +
Preference number: 6 (lower is better)
Translates to: GGTNVPSAPESG*GPHPGRPFTPH
Trigger: ATGGGGAGTAAAGGGCCTACCTGGATGTGGACCTCACCCTGACTCGGGAGCAGACGGAACGTTTGTCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588036.5
CDS CCA 72 bp TCCCCAGCTTCTCCTGTCTCCAATCTGTTGGGTTCTTaGGGTTCTTCGTCTTCCAGCGGGGTGGAGCTGCTG +
Preference number: 6 (lower is better)
Translates to: SPASPVSNLLGS*GSSSSSGVELL
Trigger: CAGCAGCTCCACCCCGCTGGAAGACGAAGAACCCCAAGAACCCAACAGATTGGAGACAGGAGAAGCTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
ENST00000592064.1
CDS CCA 72 bp CAGTGGCCCCCACTGCTTTTCTTCCTCTTCCAGCAATaGCTCTTCGGGCCCAGAGTTCGAATCTCGCGATCG +
Preference number: 6 (lower is better)
Translates to: QWPPLLFFLFQQ*LFGPRVRISRS
Trigger: CGATCGCGAGATTCGAACTCTGGGCCCGAAGAGCCATTGCTGGAAGAGGAAGAAAAGCAGTGGGGGCCACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000590526.5
ENST00000591286.5
ENST00000592064.1
CDS CCA 72 bp GCGTCAGGGTGTTCCCAAGAGATGAACAGTTCCATCTaGAGCCCTGTCCCCCACCAGACTCCAAGTCCCCAT +
Preference number: 6 (lower is better)
Translates to: ASGCSQEMNSSI*SPVPHQTPSPH
Trigger: ATGGGGACTTGGAGTCTGGTGGGGGACAGGGCTCCAGATGGAACTGTTCATCTCTTGGGAACACCCTGACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591789.1
CDS TCA 72 bp ACAGCAGGTCCGCCACTAGAAGGCGTGGCTCCACCGTaGATTCTAATTGGTCCGTGCTATCGAGGCACTGTC +
Preference number: 6 (lower is better)
Translates to: TAGPPLEGVAPP*ILIGPCYRGTV
Trigger: GACAGTGCCTCGATAGCACGGACCAATTAGAATTCACGGTGGAGCCACGCCTTCTAGTGGCGGACCTGCTGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344680.8
CDS CCA 72 bp GCCACTAGAAGGCGTGGCTCCACCGTGAATTCTAATTaGTCCGTGCTATCGAGGCACTGTCCCCTTACTGGC +
Preference number: 6 (lower is better)
Translates to: ATRRRGSTVNSN*SVLSRHCPLTG
Trigger: GCCAGTAAGGGGACAGTGCCTCGATAGCACGGACCAATTAGAATTCACGGTGGAGCCACGCCTTCTAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344680.8
CDS TCA 72 bp AGAGTCGTCGTTCCCTCCTTCTGTGGAATCAGGAGTTaGGGAGGCTGTAGACGGAGCTTCTTTGCAGTGGGC +
Preference number: 6 (lower is better)
Translates to: RVVVPSFCGIRS*GGCRRSFFAVG
Trigger: GCCCACTGCAAAGAAGCTCCGTCTACAGCCTCCTCAACTCCTGATTCCACAGAAGGAGGGAACGACGACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245923.9
ENST00000344680.8
ENST00000587597.5
ENST00000591286.5
CDS TCA 72 bp AGAGTCGTCGTTCCCTCCTTCTGTGGAATCAGGAGTTaGGGAGGCTGTAGACGGAGCTTCTTCTGCGAGAGG +
Preference number: 6 (lower is better)
Translates to: RVVVPSFCGIRS*GGCRRSFFCER
Trigger: CCTCTCGCAGAAGAAGCTCCGTCTACAGCCTCCTCAACTCCTGATTCCACAGAAGGAGGGAACGACGACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590526.5
CDS CCA 72 bp GTTCCTAGAAGGCGTGGCTCCACCGTGAATTCTAATTaGTCCGTGCTATCGAGGCACTGTCCCCTTACTGGC +
Preference number: 6 (lower is better)
Translates to: VPRRRGSTVNSN*SVLSRHCPLTG
Trigger: GCCAGTAAGGGGACAGTGCCTCGATAGCACGGACCAATTAGAATTCACGGTGGAGCCACGCCTTCTAGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245923.9
ENST00000587597.5
ENST00000590526.5
CDS CCA 72 bp TTACCTAGAAGGCGTGGCTCCACCGTGAATTCTAATTaGTCCGTGCTATCGAGGCACTGTCCCCTTACTGGC +
Preference number: 6 (lower is better)
Translates to: LPRRRGSTVNSN*SVLSRHCPLTG
Trigger: GCCAGTAAGGGGACAGTGCCTCGATAGCACGGACCAATTAGAATTCACGGTGGAGCCACGCCTTCTAGGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591286.5
ENST00000592064.1
CDS GCA 72 bp GCCTTCTGTGGGCCAATGCAGCATCTTCATACACGTTaGTTACCTAGAAGGCGTGGCTCCACCGTGAATTCT +
Preference number: 6 (lower is better)
Translates to: AFCGPMQHLHTR*LPRRRGSTVNS
Trigger: AGAATTCACGGTGGAGCCACGCCTTCTAGGTAAGCAACGTGTATGAAGATGCTGCATTGGCCCACAGAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591286.5
ENST00000592064.1
CDS GCA 72 bp ACAGCAGGTCCGCCACTTTTGCCTTCTGTGGGCCAATaGAGCATCTTCATACACGTTGCTTACCTAGAAGGC +
Preference number: 6 (lower is better)
Translates to: TAGPPLLPSVGQ*SIFIHVAYLEG
Trigger: GCCTTCTAGGTAAGCAACGTGTATGAAGATGCTGCATTGGCCCACAGAAGGCAAAAGTGGCGGACCTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591286.5
CDS TCA 72 bp ATACACGTTGCTTACCTAGAAGGCGTGGCTCCACCGTaGATTCTAATTGGTCCGTGCTATCGAGGCACTGTC +
Preference number: 6 (lower is better)
Translates to: IHVAYLEGVAPP*ILIGPCYRGTV
Trigger: GACAGTGCCTCGATAGCACGGACCAATTAGAATTCACGGTGGAGCCACGCCTTCTAGGTAAGCAACGTGTAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591286.5
ENST00000592064.1
CDS CAA 72 bp GATGTGGCTCAACTGATTGGTCACCAACCCCACATATaGGTCGATCTGAGCCTTTACTCCCCATATCGGCTC +
Preference number: 6 (lower is better)
Translates to: DVAQLIGHQPHI*VDLSLYSPYRL
Trigger: GAGCCGATATGGGGAGTAAAGGCTCAGATCGACCAATATGTGGGGTTGGTGACCAATCAGTTGAGCCACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590746.5
CDS GCA 72 bp TCAAAATCCTCTCACCTTTTGCCTTCTGTGGGCCAATaGAGCATCTTCATACACGTTGCTTACCTAGAAGGC +
Preference number: 6 (lower is better)
Translates to: SKSSHLLPSVGQ*SIFIHVAYLEG
Trigger: GCCTTCTAGGTAAGCAACGTGTATGAAGATGCTGCATTGGCCCACAGAAGGCAAAAGGTGAGAGGATTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592064.1
CDS CAA 90 bp TTCCTTTGCGAGGTTGGTCCCTTTAATTCAAAATCCTCTCACCTTTaGCCTTCTGTGGGCCAATGCAGCATCTTCATACACGTTGCTTAC +
Preference number: 6 (lower is better)
Translates to: FLCEVGPFNSKSSHL*PSVGQCSIFIHVAY
Trigger: GTAAGCAACGTGTATGAAGATGCTGCATTGGCCCACAGAAGGCAAAAGGTGAGAGGATTTTGAATTAAAGGGACCAACCTCGCAAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592064.1
CDS CAA 72 bp GAGGTTGGTCCCTTTAATTCAAAATCCTCTCACCTTTaGCCTTCTGTGGGCCAATGCAGCATCTTCATACAC +
Preference number: 6 (lower is better)
Translates to: EVGPFNSKSSHL*PSVGQCSIFIH
Trigger: GTGTATGAAGATGCTGCATTGGCCCACAGAAGGCAAAAGGTGAGAGGATTTTGAATTAAAGGGACCAACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592064.1
CDS CCA 72 bp CCTTTAATTCAAAATCCTCTCACCTTTTGCCTTCTGTaGGCCAATGCAGCATCTTCATACACGTTGCTTACC +
Preference number: 6 (lower is better)
Translates to: PLIQNPLTFCLL*ANAASSYTLLT
Trigger: GGTAAGCAACGTGTATGAAGATGCTGCATTGGCCCACAGAAGGCAAAAGGTGAGAGGATTTTGAATTAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592064.1
CDS GCA 72 bp TCTATCTCTTCCCTTTTCCACTATGTACTGTTCCTTTaGGAGGTTGGTCCCTTTAATTCAAAATCCTCTCAC +
Preference number: 6 (lower is better)
Translates to: SISSLFHYVLFL*EVGPFNSKSSH
Trigger: GTGAGAGGATTTTGAATTAAAGGGACCAACCTCGCAAAGGAACAGTACATAGTGGAAAAGGGAAGAGATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592064.1