RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RTL9 (Homo sapiens)

Ensembl gene IDs: ENSG00000243978

Ensembl transcript IDs: ENST00000465301.2, ENST00000520821.5, ENST00000540313.1

Found 503 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGTATAGGAGTGGGCATCGCTCTCCTTATAGGCTCCCCTGCCAGGTaGAATAGAACCAGGGCTTCCTCAAGTTTGCCTGCTGACACATGG +
Preference number: 1 (lower is better)
Translates to: GIGVGIALLIGSPAR*NRTRASSSLPADTW
Trigger: CCATGTGTCAGCAGGCAAACTTGAGGAAGCCCTGGTTCTATTTCACCTGGCAGGGGAGCCTATAAGGAGAGCGATGCCCACTCCTATACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
3UTR CCA 90 bp CAAGGACCCTGGAGACCCATTTTAGGTGCTATGAGTTGGGGCATATaGGGCAAGTCTACTGGGTTACAAGGGTGGTATAGGAGTGGGCAT +
Preference number: 1 (lower is better)
Translates to: QGPWRPILGAMSWGI*GKSTGLQGWYRSGH
Trigger: ATGCCCACTCCTATACCACCCTTGTAACCCAGTAGACTTGCCCCATATGCCCCAACTCATAGCACCTAAAATGGGTCTCCAGGGTCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
3UTR CCA 90 bp AGAGAAGGTCAAATCAGCCAAGTGAGAGGTAAGGTGGGATGTGCCTaGAGCGGGAGGCTGAAGGGTGAAGGCAACAAGGTTTATAATGTA +
Preference number: 1 (lower is better)
Translates to: REGQISQVRGKVGCA*SGRLKGEGNKVYNV
Trigger: TACATTATAAACCTTGTTGCCTTCACCCTTCAGCCTCCCGCTCCAGGCACATCCCACCTTACCTCTCACTTGGCTGATTTGACCTTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
3UTR-3UTR TCA 90 bp CCAGAGGTCAGAGCTAGAGAACCCCCACTGAGGGACAAGACAAAGGCCATAAACGGCTCCCCTGCCAGGTaGAATAGAACCAGGGCTTCC +
Preference number: 2 (lower is better)
Translates to: PEVRAREPPLRDKTKAINGSPAR*NRTRAS
Trigger: GGAAGCCCTGGTTCTATTTCACCTGGCAGGGGAGCC...GTTTATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAGCTCTGACCTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
3UTR-3UTR CCA 90 bp AACAGGGCAAGGACCCTGGAGACCCATTTTAGGTGCTATGAGTTGGGGCATATGAAGGTGGGATGTGCCTaGAGCGGGAGGCTGAAGGGT +
Preference number: 2 (lower is better)
Translates to: NRARTLETHFRCYELGHMKVGCA*SGRLKG
Trigger: ACCCTTCAGCCTCCCGCTCCAGGCACATCCCACCTT...CATATGCCCCAACTCATAGCACCTAAAATGGGTCTCCAGGGTCCTTGCCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
3UTR-3UTR TCA 90 bp CACCCAGAGGTCAGAGCTAGAGAACCCCCACTGAGGGACAAGACAAAGGCCATAGTCAAATCAGCCAAGTaGGAGGTAAGGTGGGATGTG +
Preference number: 2 (lower is better)
Translates to: HPEVRAREPPLRDKTKAIVKSAK*EVRWDV
Trigger: CACATCCCACCTTACCTCTCACTTGGCTGATTTGAC...TATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAGCTCTGACCTCTGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
3UTR-3UTR TCA 90 bp CACCCAGAGGTCAGAGCTAGAGAACCCCCACTGAGGGACAAGACAAAGGCCATACTCAAGTTTGCCTGCTaGCACATGGCAAGATACGCT +
Preference number: 2 (lower is better)
Translates to: HPEVRAREPPLRDKTKAILKFAC*HMARYA
Trigger: AGCGTATCTTGCCATGTGTCAGCAGGCAAACTTGAG...TATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAGCTCTGACCTCTGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
3UTR-3UTR TCA 90 bp CCACCACCTGAAGGCAAACACTGCTCACATTATGTTCTAGCTATCTATGCCTGTGGCTCCCCTGCCAGGTaGAATAGAACCAGGGCTTCC +
Preference number: 2 (lower is better)
Translates to: PPPEGKHCSHYVLAIYACGSPAR*NRTRAS
Trigger: GGAAGCCCTGGTTCTATTTCACCTGGCAGGGGAGCC...ACAGGCATAGATAGCTAGAACATAATGTGAGCAGTGTTTGCCTTCAGGTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
3UTR-3UTR GCA 90 bp TCTAGCTATCTATGCCTGTTTATAGACCAAGACCCTCATCAAGAGTGCTGGCCAGGGCTTCCTCAAGTTTaGCTGCTGACACATGGCAAG +
Preference number: 2 (lower is better)
Translates to: SSYLCLFIDQDPHQECWPGLPQV*LLTHGK
Trigger: CTTGCCATGTGTCAGCAGGCAAACTTGAGGAAGCCC...TGGCCAGCACTCTTGATGAGGGTCTTGGTCTATAAACAGGCATAGATAGCTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
3UTR-3UTR CCA 90 bp GTCCCTACTCTGATTGTCAGGGCAGGTCTTAGGCATGTGGGTGAAAGAGAAGGTTGTAGTTTAATGGAATaGGTCCAGGAACCAGTCCTC +
Preference number: 2 (lower is better)
Translates to: VPTLIVRAGLRHVGEREGCSLME*VQEPVL
Trigger: GAGGACTGGTTCCTGGACCCATTCCATTAAACTACA...ACCTTCTCTTTCACCCACATGCCTAAGACCTGCCCTGACAATCAGAGTAGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
3UTR-3UTR GCA 90 bp CACCCAGAGGTCAGAGCTAGAGAACCCCCACTGAGGGACAAGACAAAGGCCATAAAGAGTTTAGCCCAATaGCTGTCACATGATACATTA +
Preference number: 2 (lower is better)
Translates to: HPEVRAREPPLRDKTKAIKSLAQ*LSHDTL
Trigger: TAATGTATCATGTGACAGGCATTGGGCTAAACTCTT...TATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAGCTCTGACCTCTGGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
3UTR-3UTR CCA 90 bp ACTATTATTATGGGTCAAAACGAATGGTTCAGGATGGATACTATAAACAGGGCAAAGGTGGGATGTGCCTaGAGCGGGAGGCTGAAGGGT +
Preference number: 2 (lower is better)
Translates to: TIIMGQNEWFRMDTINRAKVGCA*SGRLKG
Trigger: ACCCTTCAGCCTCCCGCTCCAGGCACATCCCACCTT...TGCCCTGTTTATAGTATCCATCCTGAACCATTCGTTTTGACCCATAATAATAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
3UTR-3UTR CCA 90 bp CCACCACCTGAAGGCAAACACTGCTCACATTATGTTCTAGCTATCTATGCCTGTTGTAGTTTAATGGAATaGGTCCAGGAACCAGTCCTC +
Preference number: 2 (lower is better)
Translates to: PPPEGKHCSHYVLAIYACCSLME*VQEPVL
Trigger: GAGGACTGGTTCCTGGACCCATTCCATTAAACTACA...ACAGGCATAGATAGCTAGAACATAATGTGAGCAGTGTTTGCCTTCAGGTGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
3UTR-3UTR CCA 90 bp GAACCCCCACTGAGGGACAAGACAAAGGCCATAAACAACAGATCAAGAGGTCAGATGGGTCAAAACGAATaGTTCAGGATGGATACTATA +
Preference number: 2 (lower is better)
Translates to: EPPLRDKTKAINNRSRGQMGQNE*FRMDTI
Trigger: TATAGTATCCATCCTGAACCATTCGTTTTGACCCAT...CTGACCTCTTGATCTGTTGTTTATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
3UTR-3UTR GCA 90 bp AAGACAAAGGCCATAAACAACAGATCAAGAGGTCAGAAGCTGACAACACAAGAAAGATATGATTTATCCTaGCTAGACTTCTCCCTGGAC +
Preference number: 2 (lower is better)
Translates to: KTKAINNRSRGQKLTTQERYDLS*LDFSLD
Trigger: GTCCAGGGAGAAGTCTAGGCAGGATAAATCATATCT...TTCTTGTGTTGTCAGCTTCTGACCTCTTGATCTGTTGTTTATGGCCTTTGTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
3UTR TCA 72 bp GTGGGCATCGCTCTCCTTATAGGCTCCCCTGCCAGGTaGAATAGAACCAGGGCTTCCTCAAGTTTGCCTGCT +
Preference number: 3 (lower is better)
Translates to: VGIALLIGSPAR*NRTRASSSLPA
Trigger: AGCAGGCAAACTTGAGGAAGCCCTGGTTCTATTTCACCTGGCAGGGGAGCCTATAAGGAGAGCGATGCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
3UTR CCA 72 bp CAAATCAGCCAAGTGAGAGGTAAGGTGGGATGTGCCTaGAGCGGGAGGCTGAAGGGTGAAGGCAACAAGGTT +
Preference number: 3 (lower is better)
Translates to: QISQVRGKVGCA*SGRLKGEGNKV
Trigger: AACCTTGTTGCCTTCACCCTTCAGCCTCCCGCTCCAGGCACATCCCACCTTACCTCTCACTTGGCTGATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
3UTR-3UTR CAA 90 bp CACCCAGAGGTCAGAGCTAGAGAACCCCCACTGAGGGACAAGACAAAGGCCATAAGGGCTTCCTCAAGTTaGCCTGCTGACACATGGCAA +
Preference number: 3 (lower is better)
Translates to: HPEVRAREPPLRDKTKAIRASSS*PADTWQ
Trigger: TTGCCATGTGTCAGCAGGCAAACTTGAGGAAGCCCT...TATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAGCTCTGACCTCTGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
3UTR CCA 72 bp TGGGGCATATGGGGCAAGTCTACTGGGTTACAAGGGTaGTATAGGAGTGGGCATCGCTCTCCTTATAGGCTC +
Preference number: 3 (lower is better)
Translates to: WGIWGKSTGLQG*YRSGHRSPYRL
Trigger: GAGCCTATAAGGAGAGCGATGCCCACTCCTATACCACCCTTGTAACCCAGTAGACTTGCCCCATATGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
3UTR-3UTR CAA 90 bp CCAGAGGTCAGAGCTAGAGAACCCCCACTGAGGGACAAGACAAAGGCCATAAACAGGGCTTCCTCAAGTTaGCCTGCTGACACATGGCAA +
Preference number: 3 (lower is better)
Translates to: PEVRAREPPLRDKTKAINRASSS*PADTWQ
Trigger: TTGCCATGTGTCAGCAGGCAAACTTGAGGAAGCCCT...GTTTATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAGCTCTGACCTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
3UTR CCA 72 bp CAAGGACCCTGGAGACCCATTTTAGGTGCTATGAGTTaGGGCATATGGGGCAAGTCTACTGGGTTACAAGGG +
Preference number: 3 (lower is better)
Translates to: QGPWRPILGAMS*GIWGKSTGLQG
Trigger: CCCTTGTAACCCAGTAGACTTGCCCCATATGCCCCAACTCATAGCACCTAAAATGGGTCTCCAGGGTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
3UTR CCA 72 bp TGGAGACCCATTTTAGGTGCTATGAGTTGGGGCATATaGGGCAAGTCTACTGGGTTACAAGGGTGGTATAGG +
Preference number: 3 (lower is better)
Translates to: WRPILGAMSWGI*GKSTGLQGWYR
Trigger: CCTATACCACCCTTGTAACCCAGTAGACTTGCCCCATATGCCCCAACTCATAGCACCTAAAATGGGTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
3UTR TCA 72 bp TTTATAGACCAAGACCCTCATCAAGAGTGCTGGCCATaGAGCACAACAGCCAAGGGGAGTGAGAGCAATCAA +
Preference number: 3 (lower is better)
Translates to: FIDQDPHQECWP*STTAKGSESNQ
Trigger: TTGATTGCTCTCACTCCCCTTGGCTGTTGTGCTTCATGGCCAGCACTCTTGATGAGGGTCTTGGTCTATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
3UTR GCA 72 bp AGGCAAACACTGCTCACATTATGTTCTAGCTATCTATaGCTGTTTATAGACCAAGACCCTCATCAAGAGTGC +
Preference number: 3 (lower is better)
Translates to: RQTLLTLCSSYL*LFIDQDPHQEC
Trigger: GCACTCTTGATGAGGGTCTTGGTCTATAAACAGGCATAGATAGCTAGAACATAATGTGAGCAGTGTTTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
3UTR GCA 72 bp AAACTACCCATAACCCCACCACCTGAAGGCAAACACTaGTCACATTATGTTCTAGCTATCTATGCCTGTTTA +
Preference number: 3 (lower is better)
Translates to: KLPITPPPEGKH*SHYVLAIYACL
Trigger: TAAACAGGCATAGATAGCTAGAACATAATGTGAGCAGTGTTTGCCTTCAGGTGGTGGGGTTATGGGTAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
3UTR GCA 72 bp TGTAGTGAGATGGTGCTTGTCAAGAGTTTAGCCCAATaGCTGTCACATGATACATTATCAATAACTGGTAGC +
Preference number: 3 (lower is better)
Translates to: CSEMVLVKSLAQ*LSHDTLSITGS
Trigger: GCTACCAGTTATTGATAATGTATCATGTGACAGGCATTGGGCTAAACTCTTGACAAGCACCATCTCACTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp AGAGGTAAGGTGGGATGTGCCTGGAGCGGGAGGCTGAAGGGTGAAGGCAACAAGTTCCTCCACAGAGCATaGGCCCCGGGCTGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: RGKVGCAWSGRLKGEGNKFLHRA*APGCFL
Trigger: CAGGAAGCAGCCCGGGGCTCATGCTCTGTGGAGGAA...CTTGTTGCCTTCACCCTTCAGCCTCCCGCTCCAGGCACATCCCACCTTACCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp AGAGGTAAGGTGGGATGTGCCTGGAGCGGGAGGCTGAAGGGTGAAGGCAACAAGCCCAGAGCCTGGGGCTaGCATCGTTTGGGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: RGKVGCAWSGRLKGEGNKPRAWG*HRLGGH
Trigger: ATGCCCACCCAAACGATGCCAGCCCCAGGCTCTGGG...CTTGTTGCCTTCACCCTTCAGCCTCCCGCTCCAGGCACATCCCACCTTACCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp AGAGGTAAGGTGGGATGTGCCTGGAGCGGGAGGCTGAAGGGTGAAGGCAACAAGAGCTCTTGTGAGCAGTaGGGGCCTCTCTCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: RGKVGCAWSGRLKGEGNKSSCEQ*GPLSRV
Trigger: GACCCTGGAGAGAGGCCCTCACTGCTCACAAGAGCT...CTTGTTGCCTTCACCCTTCAGCCTCCCGCTCCAGGCACATCCCACCTTACCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp TTACAAGGGTGGTATAGGAGTGGGCATCGCTCTCCTTATAGGCTCCCCTGCCAGTTCCTCCACAGAGCATaGGCCCCGGGCTGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LQGWYRSGHRSPYRLPCQFLHRA*APGCFL
Trigger: CAGGAAGCAGCCCGGGGCTCATGCTCTGTGGAGGAA...CTGGCAGGGGAGCCTATAAGGAGAGCGATGCCCACTCCTATACCACCCTTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp AGAGGTAAGGTGGGATGTGCCTGGAGCGGGAGGCTGAAGGGTGAAGGCAACAAGCAAGAGTGCTGGCCATaGAGCACAACAGCCAAGGGG +
Preference number: 4 (lower is better)
Translates to: RGKVGCAWSGRLKGEGNKQECWP*STTAKG
Trigger: CCCCTTGGCTGTTGTGCTTCATGGCCAGCACTCTTG...CTTGTTGCCTTCACCCTTCAGCCTCCCGCTCCAGGCACATCCCACCTTACCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp CACCCAGAGGTCAGAGCTAGAGAACCCCCACTGAGGGACAAGACAAAGGCCATAGGCTCCCCTGCCAGGTaGAATAGAACCAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: HPEVRAREPPLRDKTKAIGSPAR*NRTRAS
Trigger: GGAAGCCCTGGTTCTATTTCACCTGGCAGGGGAGCC...TATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAGCTCTGACCTCTGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp AGAGGTAAGGTGGGATGTGCCTGGAGCGGGAGGCTGAAGGGTGAAGGCAACAAGCTAGAGAACCCCCACTaGGGGACAAGACAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: RGKVGCAWSGRLKGEGNKLENPH*GTRQRP
Trigger: TGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAG...CTTGTTGCCTTCACCCTTCAGCCTCCCGCTCCAGGCACATCCCACCTTACCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp CCCCTGCCAGGTGAAATAGAACCAGGGCTTCCTCAAGTTTGCCTGCTGACACATCATCGCCCCAGAGCCTaGGGCTGGCATCGTTTGGGT +
Preference number: 4 (lower is better)
Translates to: PLPGEIEPGLPQVCLLTHHRPRA*GWHRLG
Trigger: ACCCAAACGATGCCAGCCCCAGGCTCTGGGGCGATG...ATGTGTCAGCAGGCAAACTTGAGGAAGCCCTGGTTCTATTTCACCTGGCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp AGAGGTAAGGTGGGATGTGCCTGGAGCGGGAGGCTGAAGGGTGAAGGCAACAAGGCTGTGTCTGTCATTTaGGGCATGGACAGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: RGKVGCAWSGRLKGEGNKAVSVI*GMDRAP
Trigger: TGGAGCTCTGTCCATGCCGCAAATGACAGACACAGC...CTTGTTGCCTTCACCCTTCAGCCTCCCGCTCCAGGCACATCCCACCTTACCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp TTACAAGGGTGGTATAGGAGTGGGCATCGCTCTCCTTATAGGCTCCCCTGCCAGAGCCACAGGATAGTGTaGAGGGAGCCCAGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: LQGWYRSGHRSPYRLPCQSHRIV*REPRRQ
Trigger: TTGCCTCCTGGGCTCCCTCCACACTATCCTGTGGCT...CTGGCAGGGGAGCCTATAAGGAGAGCGATGCCCACTCCTATACCACCCTTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp CCCCTGCCAGGTGAAATAGAACCAGGGCTTCCTCAAGTTTGCCTGCTGACACATGGGGCTGGCATCGTTTaGGTGGGCATCACTCCAGAG +
Preference number: 4 (lower is better)
Translates to: PLPGEIEPGLPQVCLLTHGAGIV*VGITPE
Trigger: CTCTGGAGTGATGCCCACCCAAACGATGCCAGCCCC...ATGTGTCAGCAGGCAAACTTGAGGAAGCCCTGGTTCTATTTCACCTGGCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp CCAGAGGTCAGAGCTAGAGAACCCCCACTGAGGGACAAGACAAAGGCCATAAACAAGGTGGGATGTGCCTaGAGCGGGAGGCTGAAGGGT +
Preference number: 4 (lower is better)
Translates to: PEVRAREPPLRDKTKAINKVGCA*SGRLKG
Trigger: ACCCTTCAGCCTCCCGCTCCAGGCACATCCCACCTT...GTTTATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAGCTCTGACCTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp GTCCCTACTCTGATTGTCAGGGCAGGTCTTAGGCATGTGGGTGAAAGAGAAGGTAGCTCTTGTGAGCAGTaGGGGCCTCTCTCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: VPTLIVRAGLRHVGEREGSSCEQ*GPLSRV
Trigger: GACCCTGGAGAGAGGCCCTCACTGCTCACAAGAGCT...ACCTTCTCTTTCACCCACATGCCTAAGACCTGCCCTGACAATCAGAGTAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp AGAGGTAAGGTGGGATGTGCCTGGAGCGGGAGGCTGAAGGGTGAAGGCAACAAGGCTGTGATGTTAATGTaGGAGGTGGATGCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: RGKVGCAWSGRLKGEGNKAVMLM*EVDASP
Trigger: TGGAGAGGCATCCACCTCTCACATTAACATCACAGC...CTTGTTGCCTTCACCCTTCAGCCTCCCGCTCCAGGCACATCCCACCTTACCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp GGCATATGGGGCAAGTCTACTGGGTTACAAGGGTGGTATAGGAGTGGGCATCGCTGGCAGAACCTGGCTTaGGTTGCCTGGGGAATCCTT +
Preference number: 4 (lower is better)
Translates to: GIWGKSTGLQGWYRSGHRWQNLA*VAWGIL
Trigger: AAGGATTCCCCAGGCAACTCAAGCCAGGTTCTGCCA...GCGATGCCCACTCCTATACCACCCTTGTAACCCAGTAGACTTGCCCCATATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp AGAGGTAAGGTGGGATGTGCCTGGAGCGGGAGGCTGAAGGGTGAAGGCAACAAGAGAGCCTGTGGGCATTaGTCCAGAAGTTTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: RGKVGCAWSGRLKGEGNKRACGH*SRSFGH
Trigger: ATGGCCAAAACTTCTGGAGCAATGCCCACAGGCTCT...CTTGTTGCCTTCACCCTTCAGCCTCCCGCTCCAGGCACATCCCACCTTACCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp AGAGGTAAGGTGGGATGTGCCTGGAGCGGGAGGCTGAAGGGTGAAGGCAACAAGAAGTCAGTGGCATACTaGCTGACTGACTTTTGGCCC +
Preference number: 4 (lower is better)
Translates to: RGKVGCAWSGRLKGEGNKKSVAY*LTDFWP
Trigger: GGGCCAAAAGTCAGTCAGGCAGTATGCCACTGACTT...CTTGTTGCCTTCACCCTTCAGCCTCCCGCTCCAGGCACATCCCACCTTACCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp AGAGGTAAGGTGGGATGTGCCTGGAGCGGGAGGCTGAAGGGTGAAGGCAACAAGGAACCTGGCTTGAGTTaGCTGGGGAATCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: RGKVGCAWSGRLKGEGNKEPGLS*LGNPSL
Trigger: AAGAGAAGGATTCCCCAGGCAACTCAAGCCAGGTTC...CTTGTTGCCTTCACCCTTCAGCCTCCCGCTCCAGGCACATCCCACCTTACCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp TTACAAGGGTGGTATAGGAGTGGGCATCGCTCTCCTTATAGGCTCCCCTGCCAGGGGATCTCAGAGGCGTaGCTATCTCTCCAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: LQGWYRSGHRSPYRLPCQGISEA*LSLQKL
Trigger: CAGCTTCTGGAGAGATAGCCACGCCTCTGAGATCCC...CTGGCAGGGGAGCCTATAAGGAGAGCGATGCCCACTCCTATACCACCCTTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp AGAGGTAAGGTGGGATGTGCCTGGAGCGGGAGGCTGAAGGGTGAAGGCAACAAGACATTGCTCCAGAGATaGGAGCCTTCACTTGTGGCA +
Preference number: 4 (lower is better)
Translates to: RGKVGCAWSGRLKGEGNKTLLQR*EPSLVA
Trigger: TGCCACAAGTGAAGGCTCCCATCTCTGGAGCAATGT...CTTGTTGCCTTCACCCTTCAGCCTCCCGCTCCAGGCACATCCCACCTTACCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp CACCCAGAGGTCAGAGCTAGAGAACCCCCACTGAGGGACAAGACAAAGGCCATAAGCAGAGGCTCTAATTaGCGCTGTGGCCATCCTTCC +
Preference number: 4 (lower is better)
Translates to: HPEVRAREPPLRDKTKAISRGSN*RCGHPS
Trigger: GGAAGGATGGCCACAGCGCCAATTAGAGCCTCTGCT...TATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAGCTCTGACCTCTGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp GGCATATGGGGCAAGTCTACTGGGTTACAAGGGTGGTATAGGAGTGGGCATCGCAGGCTGTCTGTGGTGTaGACATTGTTCCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: GIWGKSTGLQGWYRSGHRRLSVV*TLFQGL
Trigger: CAGGCCCTGGAACAATGTCCACACCACAGACAGCCT...GCGATGCCCACTCCTATACCACCCTTGTAACCCAGTAGACTTGCCCCATATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp ACAGGGCAAGGACCCTGGAGACCCATTTTAGGTGCTATGAGTTGGGGCATATGGTCTGAAGGGCCACAATaGCTTGCACAAGGTAGGCGC +
Preference number: 4 (lower is better)
Translates to: TGQGPWRPILGAMSWGIWSEGPQ*LAQGRR
Trigger: GCGCCTACCTTGTGCAAGGCATTGTGGCCCTTCAGA...CCATATGCCCCAACTCATAGCACCTAAAATGGGTCTCCAGGGTCCTTGCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465301.2
CDS-3UTR GCA 90 bp ACAGGGCAAGGACCCTGGAGACCCATTTTAGGTGCTATGAGTTGGGGCATATGGGCATGGACATACCCATaGCACATCCAGAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: TGQGPWRPILGAMSWGIWAWTYP*HIQRLW
Trigger: CCACAGCCTCTGGATGTGGCATGGGTATGTCCATGC...CCATATGCCCCAACTCATAGCACCTAAAATGGGTCTCCAGGGTCCTTGCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp GGCATATGGGGCAAGTCTACTGGGTTACAAGGGTGGTATAGGAGTGGGCATCGCCAGCGTTTGGAAACATaGTGGTGCTCCTCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: GIWGKSTGLQGWYRSGHRQRLET*WCSSVC
Trigger: GCAGACTGAGGAGCACCAGCATGTTTCCAAACGCTG...GCGATGCCCACTCCTATACCACCCTTGTAACCCAGTAGACTTGCCCCATATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp GTCCCTACTCTGATTGTCAGGGCAGGTCTTAGGCATGTGGGTGAAAGAGAAGGTAGCCACAGGATAGTGTaGAGGGAGCCCAGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: VPTLIVRAGLRHVGEREGSHRIV*REPRRQ
Trigger: TTGCCTCCTGGGCTCCCTCCACACTATCCTGTGGCT...ACCTTCTCTTTCACCCACATGCCTAAGACCTGCCCTGACAATCAGAGTAGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp AATGGAATGGGTCCAGGAACCAGTCCTCCAGTTAGCGGTCGAGTCAGATATCACGCTGGGAGCTGGCACTaGCTGTGTAGACATCACTCC +
Preference number: 4 (lower is better)
Translates to: NGMGPGTSPPVSGRVRYHAGSWH*LCRHHS
Trigger: GGAGTGATGTCTACACAGCCAGTGCCAGCTCCCAGC...GTGATATCTGACTCGACCGCTAACTGGAGGACTGGTTCCTGGACCCATTCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp AAGTCTACTGGGTTACAAGGGTGGTATAGGAGTGGGCATCGCTCTCCTTATAGGGGGGCTGGCATCGTTTaGGTGGGCATCACTCCAGAG +
Preference number: 4 (lower is better)
Translates to: KSTGLQGWYRSGHRSPYRGAGIV*VGITPE
Trigger: CTCTGGAGTGATGCCCACCCAAACGATGCCAGCCCC...CCTATAAGGAGAGCGATGCCCACTCCTATACCACCCTTGTAACCCAGTAGACTT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp CCCCTGCCAGGTGAAATAGAACCAGGGCTTCCTCAAGTTTGCCTGCTGACACATCTGTCATCAGTGAGGTaGTCATGGCTCCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PLPGEIEPGLPQVCLLTHLSSVR*SWLQRL
Trigger: CAGCCTCTGGAGCCATGACCACCTCACTGATGACAG...ATGTGTCAGCAGGCAAACTTGAGGAAGCCCTGGTTCTATTTCACCTGGCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp GGCATATGGGGCAAGTCTACTGGGTTACAAGGGTGGTATAGGAGTGGGCATCGCCATTGCTCCAGAAGTTaGAGCTCTCCTCAGTGGCGT +
Preference number: 4 (lower is better)
Translates to: GIWGKSTGLQGWYRSGHRHCSRS*SSPQWR
Trigger: ACGCCACTGAGGAGAGCTCCAACTTCTGGAGCAATG...GCGATGCCCACTCCTATACCACCCTTGTAACCCAGTAGACTTGCCCCATATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp AGAGGTAAGGTGGGATGTGCCTGGAGCGGGAGGCTGAAGGGTGAAGGCAACAAGCTCTCATTTGCAGCATaGACATTGATCCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RGKVGCAWSGRLKGEGNKLSFAA*TLIQRL
Trigger: CAGCCTCTGGATCAATGTCCATGCTGCAAATGAGAG...CTTGTTGCCTTCACCCTTCAGCCTCCCGCTCCAGGCACATCCCACCTTACCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp AACAGGGCAAGGACCCTGGAGACCCATTTTAGGTGCTATGAGTTGGGGCATATGTCCCTCCAGCGGTCATaGACTTCATGGGCGACATGG +
Preference number: 4 (lower is better)
Translates to: NRARTLETHFRCYELGHMSLQRS*TSWATW
Trigger: CCATGTCGCCCATGAAGTCCATGACCGCTGGAGGGA...CATATGCCCCAACTCATAGCACCTAAAATGGGTCTCCAGGGTCCTTGCCCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp CCAGAGGTCAGAGCTAGAGAACCCCCACTGAGGGACAAGACAAAGGCCATAAACAGCAGAGGCTCTAATTaGCGCTGTGGCCATCCTTCC +
Preference number: 4 (lower is better)
Translates to: PEVRAREPPLRDKTKAINSRGSN*RCGHPS
Trigger: GGAAGGATGGCCACAGCGCCAATTAGAGCCTCTGCT...GTTTATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAGCTCTGACCTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp AGAGGTAAGGTGGGATGTGCCTGGAGCGGGAGGCTGAAGGGTGAAGGCAACAAGCTGTCATTTGTGGCATaGACATACCCATGCCACATC +
Preference number: 4 (lower is better)
Translates to: RGKVGCAWSGRLKGEGNKLSFVA*TYPCHI
Trigger: GATGTGGCATGGGTATGTCCATGCCACAAATGACAG...CTTGTTGCCTTCACCCTTCAGCCTCCCGCTCCAGGCACATCCCACCTTACCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp ACAGGGCAAGGACCCTGGAGACCCATTTTAGGTGCTATGAGTTGGGGCATATGGAGGCTGTCTGTGGTGTaGACATTGTTCCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: TGQGPWRPILGAMSWGIWRLSVV*TLFQGL
Trigger: CAGGCCCTGGAACAATGTCCACACCACAGACAGCCT...CCATATGCCCCAACTCATAGCACCTAAAATGGGTCTCCAGGGTCCTTGCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp TTACAAGGGTGGTATAGGAGTGGGCATCGCTCTCCTTATAGGCTCCCCTGCCAGTGGCCCTGTTTGGGATaGCAAAGAACAGCACTGAGG +
Preference number: 4 (lower is better)
Translates to: LQGWYRSGHRSPYRLPCQWPCLG*QRTALR
Trigger: CCTCAGTGCTGTTCTTTGCCATCCCAAACAGGGCCA...CTGGCAGGGGAGCCTATAAGGAGAGCGATGCCCACTCCTATACCACCCTTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp AGAGGTAAGGTGGGATGTGCCTGGAGCGGGAGGCTGAAGGGTGAAGGCAACAAGACTTTTGGCCCTGTTTaGGATGGCAAAGAACAGCAC +
Preference number: 4 (lower is better)
Translates to: RGKVGCAWSGRLKGEGNKTFGPV*DGKEQH
Trigger: GTGCTGTTCTTTGCCATCCCAAACAGGGCCAAAAGT...CTTGTTGCCTTCACCCTTCAGCCTCCCGCTCCAGGCACATCCCACCTTACCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp CCAGAGGTCAGAGCTAGAGAACCCCCACTGAGGGACAAGACAAAGGCCATAAACGCTGTTGGCAGAACCTaGCTTGAGTTGCCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: PEVRAREPPLRDKTKAINAVGRT*LELPGE
Trigger: TTCCCCAGGCAACTCAAGCCAGGTTCTGCCAACAGC...GTTTATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAGCTCTGACCTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp GGCATATGGGGCAAGTCTACTGGGTTACAAGGGTGGTATAGGAGTGGGCATCGCCGTTTGGAAACATGCTaGTGCTCCTCAGTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GIWGKSTGLQGWYRSGHRRLETC*CSSVCC
Trigger: GCAGCAGACTGAGGAGCACCAGCATGTTTCCAAACG...GCGATGCCCACTCCTATACCACCCTTGTAACCCAGTAGACTTGCCCCATATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp CACCCAGAGGTCAGAGCTAGAGAACCCCCACTGAGGGACAAGACAAAGGCCATAACTGGGTTACAAGGGTaGTATAGGAGTGGGCATCGC +
Preference number: 4 (lower is better)
Translates to: HPEVRAREPPLRDKTKAITGLQG*YRSGHR
Trigger: GCGATGCCCACTCCTATACCACCCTTGTAACCCAGT...TATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAGCTCTGACCTCTGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp AACAGGGCAAGGACCCTGGAGACCCATTTTAGGTGCTATGAGTTGGGGCATATGTGGGACTGTCATCAGTaGGGTGGTCATGGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: NRARTLETHFRCYELGHMWDCHQ*GGHGSR
Trigger: TCTGGAGCCATGACCACCTCACTGATGACAGTCCCA...CATATGCCCCAACTCATAGCACCTAAAATGGGTCTCCAGGGTCCTTGCCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp AGAGGTAAGGTGGGATGTGCCTGGAGCGGGAGGCTGAAGGGTGAAGGCAACAAGTTGTCATTTTCTCCGTaGACATCGTTCCTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: RGKVGCAWSGRLKGEGNKLSFSP*TSFLRL
Trigger: AAGCCTCAGGAACGATGTTCACGGAGAAAATGACAA...CTTGTTGCCTTCACCCTTCAGCCTCCCGCTCCAGGCACATCCCACCTTACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp CACCCAGAGGTCAGAGCTAGAGAACCCCCACTGAGGGACAAGACAAAGGCCATACAGAGTCTGTGGCTTTaGTTTCCGGAGTGGACATCA +
Preference number: 4 (lower is better)
Translates to: HPEVRAREPPLRDKTKAIQSLWL*FPEWTS
Trigger: TGATGTCCACTCCGGAAATCAAAGCCACAGACTCTG...TATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAGCTCTGACCTCTGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp GTCCCTACTCTGATTGTCAGGGCAGGTCTTAGGCATGTGGGTGAAAGAGAAGGTGGCATACTGCCTGACTaGCTTTTGGCCCTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: VPTLIVRAGLRHVGEREGGILPD*LLALFG
Trigger: CCCAAACAGGGCCAAAAGTCAGTCAGGCAGTATGCC...ACCTTCTCTTTCACCCACATGCCTAAGACCTGCCCTGACAATCAGAGTAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp ATGGAATGGGTCCAGGAACCAGTCCTCCAGTTAGCGGTCGAGTCAGATATCACAGGCATACTGCCTGACTaGCTTTTGGCCCTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: MEWVQEPVLQLAVESDITGILPD*LLALFG
Trigger: CCCAAACAGGGCCAAAAGTCAGTCAGGCAGTATGCC...TGTGATATCTGACTCGACCGCTAACTGGAGGACTGGTTCCTGGACCCATTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp CCCCTGCCAGGTGAAATAGAACCAGGGCTTCCTCAAGTTTGCCTGCTGACACATCAGTGGCATACTGCCTaGCTGACTTTTGGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: PLPGEIEPGLPQVCLLTHQWHTA*LTFGPV
Trigger: AACAGGGCCAAAAGTCAGTCAGGCAGTATGCCACTG...ATGTGTCAGCAGGCAAACTTGAGGAAGCCCTGGTTCTATTTCACCTGGCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp GGCATATGGGGCAAGTCTACTGGGTTACAAGGGTGGTATAGGAGTGGGCATCGCGTCAAATCAGCCAAGTaGGAGGTAAGGTGGGATGTG +
Preference number: 4 (lower is better)
Translates to: GIWGKSTGLQGWYRSGHRVKSAK*EVRWDV
Trigger: CACATCCCACCTTACCTCTCACTTGGCTGATTTGAC...GCGATGCCCACTCCTATACCACCCTTGTAACCCAGTAGACTTGCCCCATATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp AATGGAATGGGTCCAGGAACCAGTCCTCCAGTTAGCGGTCGAGTCAGATATCACCTAGAGAACCCCCACTaGGGGACAAGACAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: NGMGPGTSPPVSGRVRYHLENPH*GTRQRP
Trigger: TGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAG...GTGATATCTGACTCGACCGCTAACTGGAGGACTGGTTCCTGGACCCATTCCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp ACTGGCCTCGGTGGTGATGGGAGTTCAGAACCTCATACACCATACACTCTTGTACAAGAGTGCTGGCCATaGAGCACAACAGCCAAGGGG +
Preference number: 4 (lower is better)
Translates to: TGLGGDGSSEPHTPYTLVQECWP*STTAKG
Trigger: CCCCTTGGCTGTTGTGCTTCATGGCCAGCACTCTTG...TACAAGAGTGTATGGTGTATGAGGTTCTGAACTCCCATCACCACCGAGGCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp AGAGGTAAGGTGGGATGTGCCTGGAGCGGGAGGCTGAAGGGTGAAGGCAACAAGGAGACCCATTTTAGGTaGTATGAGTTGGGGCATATG +
Preference number: 4 (lower is better)
Translates to: RGKVGCAWSGRLKGEGNKETHFR*YELGHM
Trigger: CATATGCCCCAACTCATAGCACCTAAAATGGGTCTC...CTTGTTGCCTTCACCCTTCAGCCTCCCGCTCCAGGCACATCCCACCTTACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp CTTGTAGTCCCTACTCTGATTGTCAGGGCAGGTCTTAGGCATGTGGGTGAAAGAGCTGGGAGCTGGCACTaGCTGTGTAGACATCACTCC +
Preference number: 4 (lower is better)
Translates to: LVVPTLIVRAGLRHVGERAGSWH*LCRHHS
Trigger: GGAGTGATGTCTACACAGCCAGTGCCAGCTCCCAGC...TCTTTCACCCACATGCCTAAGACCTGCCCTGACAATCAGAGTAGGGACTACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp CCCCTGCCAGGTGAAATAGAACCAGGGCTTCCTCAAGTTTGCCTGCTGACACATTGGAGCTCTCCTCAGTaGCGTGGACATCTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: PLPGEIEPGLPQVCLLTHWSSPQ*RGHLSR
Trigger: TCTGGAAAGATGTCCACGCCACTGAGGAGAGCTCCA...ATGTGTCAGCAGGCAAACTTGAGGAAGCCCTGGTTCTATTTCACCTGGCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp TTACAAGGGTGGTATAGGAGTGGGCATCGCTCTCCTTATAGGCTCCCCTGCCAGGTTGCCGTAACTGGTTaGGTGGACATTGCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LQGWYRSGHRSPYRLPCQVAVTG*VDIAPE
Trigger: TTCTGGAGCAATGTCCACCCAACCAGTTACGGCAAC...CTGGCAGGGGAGCCTATAAGGAGAGCGATGCCCACTCCTATACCACCCTTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp GTCCCTACTCTGATTGTCAGGGCAGGTCTTAGGCATGTGGGTGAAAGAGAAGGTCGGTCATGGACTTCATaGGCGACATGGACATCCCTC +
Preference number: 4 (lower is better)
Translates to: VPTLIVRAGLRHVGEREGRSWTS*ATWTSL
Trigger: GAGGGATGTCCATGTCGCCCATGAAGTCCATGACCG...ACCTTCTCTTTCACCCACATGCCTAAGACCTGCCCTGACAATCAGAGTAGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp AATGGAATGGGTCCAGGAACCAGTCCTCCAGTTAGCGGTCGAGTCAGATATCACCGGTCATGGACTTCATaGGCGACATGGACATCCCTC +
Preference number: 4 (lower is better)
Translates to: NGMGPGTSPPVSGRVRYHRSWTS*ATWTSL
Trigger: GAGGGATGTCCATGTCGCCCATGAAGTCCATGACCG...GTGATATCTGACTCGACCGCTAACTGGAGGACTGGTTCCTGGACCCATTCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp ACAGGGCAAGGACCCTGGAGACCCATTTTAGGTGCTATGAGTTGGGGCATATGGTCCCTCCAGAGACCATaGCTGTTGTTTGTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: TGQGPWRPILGAMSWGIWSLQRP*LLFVQW
Trigger: CCACTGCACAAACAACAGCCATGGTCTCTGGAGGGA...CCATATGCCCCAACTCATAGCACCTAAAATGGGTCTCCAGGGTCCTTGCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp ACAGGGCAAGGACCCTGGAGACCCATTTTAGGTGCTATGAGTTGGGGCATATGGCACTGGTTTGCAATGTaGACGTTGCTCCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: TGQGPWRPILGAMSWGIWHWFAM*TLLQRP
Trigger: TGGCCTCTGGAGCAACGTCCACATTGCAAACCAGTG...CCATATGCCCCAACTCATAGCACCTAAAATGGGTCTCCAGGGTCCTTGCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp CCAGAGGTCAGAGCTAGAGAACCCCCACTGAGGGACAAGACAAAGGCCATAAACCAGTCATGTGCGATGTaGGCTTTGATCCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PEVRAREPPLRDKTKAINQSCAM*ALIQRL
Trigger: CAGCCTCTGGATCAAAGCCCACATCGCACATGACTG...GTTTATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAGCTCTGACCTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp CACCCAGAGGTCAGAGCTAGAGAACCCCCACTGAGGGACAAGACAAAGGCCATATGGCACTTCCTTTGGTaGTGGTTTCGCAGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: HPEVRAREPPLRDKTKAIWHFLW*WFRSFR
Trigger: CCTGAAACTGCGAAACCACCACCAAAGGAAGTGCCA...TATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAGCTCTGACCTCTGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp TTACAAGGGTGGTATAGGAGTGGGCATCGCTCTCCTTATAGGCTCCCCTGCCAGGGATGGCACTTCCTTTaGTGGTGGTTTCGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: LQGWYRSGHRSPYRLPCQGWHFL*WWFRSF
Trigger: GAAACTGCGAAACCACCACCAAAGGAAGTGCCATCC...CTGGCAGGGGAGCCTATAAGGAGAGCGATGCCCACTCCTATACCACCCTTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp CCAGAGGTCAGAGCTAGAGAACCCCCACTGAGGGACAAGACAAAGGCCATAAACTTCTCTTCAGCCAGCTaGCACTCGGTGTACAGAGAC +
Preference number: 4 (lower is better)
Translates to: PEVRAREPPLRDKTKAINFSSAS*HSVYRD
Trigger: GTCTCTGTACACCGAGTGCCAGCTGGCTGAAGAGAA...GTTTATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAGCTCTGACCTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp AGAGGTAAGGTGGGATGTGCCTGGAGCGGGAGGCTGAAGGGTGAAGGCAACAAGTGTAGTTTAATGGAATaGGTCCAGGAACCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: RGKVGCAWSGRLKGEGNKCSLME*VQEPVL
Trigger: GAGGACTGGTTCCTGGACCCATTCCATTAAACTACA...CTTGTTGCCTTCACCCTTCAGCCTCCCGCTCCAGGCACATCCCACCTTACCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp CTTGTAGTCCCTACTCTGATTGTCAGGGCAGGTCTTAGGCATGTGGGTGAAAGAGCTTGTTGGCTGGGGTaGTGTACCTCCAGAAGCTAC +
Preference number: 4 (lower is better)
Translates to: LVVPTLIVRAGLRHVGERACWLG*CTSRSY
Trigger: GTAGCTTCTGGAGGTACATCACCCCAGCCAACAAGC...TCTTTCACCCACATGCCTAAGACCTGCCCTGACAATCAGAGTAGGGACTACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp GTCCCTACTCTGATTGTCAGGGCAGGTCTTAGGCATGTGGGTGAAAGAGAAGGTGTCTACATTTTGTGTTaGCCATGGGGACATCGCCCC +
Preference number: 4 (lower is better)
Translates to: VPTLIVRAGLRHVGEREGVYILC*PWGHRP
Trigger: GGGGCGATGTCCCCATGGTCAACACAAAATGTAGAC...ACCTTCTCTTTCACCCACATGCCTAAGACCTGCCCTGACAATCAGAGTAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp GGCATATGGGGCAAGTCTACTGGGTTACAAGGGTGGTATAGGAGTGGGCATCGCTGCAGATGTCAATCCTaGGGCCATGGTTCTCATTTG +
Preference number: 4 (lower is better)
Translates to: GIWGKSTGLQGWYRSGHRCRCQS*GHGSHL
Trigger: CAAATGAGAACCATGGCCTCAGGATTGACATCTGCA...GCGATGCCCACTCCTATACCACCCTTGTAACCCAGTAGACTTGCCCCATATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp CACCCAGAGGTCAGAGCTAGAGAACCCCCACTGAGGGACAAGACAAAGGCCATATGCTCATTGGCTGACTaGGCATCTTTCCAGACACTT +
Preference number: 4 (lower is better)
Translates to: HPEVRAREPPLRDKTKAICSLAD*ASFQTL
Trigger: AAGTGTCTGGAAAGATGCTCAGTCAGCCAATGAGCA...TATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAGCTCTGACCTCTGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp ATGGAATGGGTCCAGGAACCAGTCCTCCAGTTAGCGGTCGAGTCAGATATCACATGGGTGCTCATTGGCTaGCTGAGCATCTTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: MEWVQEPVLQLAVESDITWVLIG*LSIFPD
Trigger: GTCTGGAAAGATGCTCAGTCAGCCAATGAGCACCCA...TGTGATATCTGACTCGACCGCTAACTGGAGGACTGGTTCCTGGACCCATTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp GAACCCCCACTGAGGGACAAGACAAAGGCCATAAACAACAGATCAAGAGGTCAGAGGATGAAGCTCTTGTaGGCAGTGAGGGCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: EPPLRDKTKAINNRSRGQRMKLL*AVRASL
Trigger: GAGAGAGGCCCTCACTGCTCACAAGAGCTTCATCCT...CTGACCTCTTGATCTGTTGTTTATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp ACAGGGCAAGGACCCTGGAGACCCATTTTAGGTGCTATGAGTTGGGGCATATGGCACTTGTGGCATGGATaGCATCATTCCAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: TGQGPWRPILGAMSWGIWHLWHG*HHSRGC
Trigger: ACAGCCTCTGGAATGATGTCATCCATGCCACAAGTG...CCATATGCCCCAACTCATAGCACCTAAAATGGGTCTCCAGGGTCCTTGCCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp AGAGGTAAGGTGGGATGTGCCTGGAGCGGGAGGCTGAAGGGTGAAGGCAACAAGAAATGCCATTCTCTCTaGATCGTCCAAAAACCCCTT +
Preference number: 4 (lower is better)
Translates to: RGKVGCAWSGRLKGEGNKKCHSL*IVQKPL
Trigger: AAGGGGTTTTTGGACGATTCAGAGAGAATGGCATTT...CTTGTTGCCTTCACCCTTCAGCCTCCCGCTCCAGGCACATCCCACCTTACCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp ATGGAATGGGTCCAGGAACCAGTCCTCCAGTTAGCGGTCGAGTCAGATATCACACCTCCATTTGCAAGATaGACCACCTCTCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: MEWVQEPVLQLAVESDITPPFAR*TTSLLL
Trigger: GAGCAGCAGAGAGGTGGTTCATCTTGCAAATGGAGG...TGTGATATCTGACTCGACCGCTAACTGGAGGACTGGTTCCTGGACCCATTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp AACAGGGCAAGGACCCTGGAGACCCATTTTAGGTGCTATGAGTTGGGGCATATGCCTCCATTTGCAAGATaGACCACCTCTCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: NRARTLETHFRCYELGHMPPFAR*TTSLLL
Trigger: GAGCAGCAGAGAGGTGGTTCATCTTGCAAATGGAGG...CATATGCCCCAACTCATAGCACCTAAAATGGGTCTCCAGGGTCCTTGCCCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp CCAGGTGAAATAGAACCAGGGCTTCCTCAAGTTTGCCTGCTGACACATGGCAAGCAGTGGCATACTGCCTaGCTGACTTTTGGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: PGEIEPGLPQVCLLTHGKQWHTA*LTFGPV
Trigger: AACAGGGCCAAAAGTCAGTCAGGCAGTATGCCACTG...CTTGCCATGTGTCAGCAGGCAAACTTGAGGAAGCCCTGGTTCTATTTCACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp CCCCTGCCAGGTGAAATAGAACCAGGGCTTCCTCAAGTTTGCCTGCTGACACATGGTGGTAACAGCTTCTaGGAGTCCTTCCAGAAACCT +
Preference number: 4 (lower is better)
Translates to: PLPGEIEPGLPQVCLLTHGGNSF*ESFQKP
Trigger: AGGTTTCTGGAAGGACTCTCAGAAGCTGTTACCACC...ATGTGTCAGCAGGCAAACTTGAGGAAGCCCTGGTTCTATTTCACCTGGCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp ACTGGCCTCGGTGGTGATGGGAGTTCAGAACCTCATACACCATACACTCTTGTATCCTCAGTCTGCTGCTaGGAGCTCAGTTCATTCCCC +
Preference number: 4 (lower is better)
Translates to: TGLGGDGSSEPHTPYTLVSSVCC*ELSSFP
Trigger: GGGGAATGAACTGAGCTCTCAGCAGCAGACTGAGGA...TACAAGAGTGTATGGTGTATGAGGTTCTGAACTCCCATCACCACCGAGGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp CCCCTGCCAGGTGAAATAGAACCAGGGCTTCCTCAAGTTTGCCTGCTGACACATTGGTTGGGTGGACATTaGTCCAGAAGTTGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: PLPGEIEPGLPQVCLLTHWLGGH*SRSWSS
Trigger: AGAGCTCCAACTTCTGGAGCAATGTCCACCCAACCA...ATGTGTCAGCAGGCAAACTTGAGGAAGCCCTGGTTCTATTTCACCTGGCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp ACAGGGCAAGGACCCTGGAGACCCATTTTAGGTGCTATGAGTTGGGGCATATGGTTGCAATGTGGACGTTaGTCCAGAGGCCATGGTTTC +
Preference number: 4 (lower is better)
Translates to: TGQGPWRPILGAMSWGIWLQCGR*SRGHGF
Trigger: GAAACCATGGCCTCTGGAGCAACGTCCACATTGCAA...CCATATGCCCCAACTCATAGCACCTAAAATGGGTCTCCAGGGTCCTTGCCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp ACAGGGCAAGGACCCTGGAGACCCATTTTAGGTGCTATGAGTTGGGGCATATGGGAACCACCTCTCTGCTaGTCCCAGATGAAGAGATAC +
Preference number: 4 (lower is better)
Translates to: TGQGPWRPILGAMSWGIWEPPLC*SQMKRY
Trigger: GTATCTCTTCATCTGGGAGCAGCAGAGAGGTGGTTC...CCATATGCCCCAACTCATAGCACCTAAAATGGGTCTCCAGGGTCCTTGCCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp CCCCTGCCAGGTGAAATAGAACCAGGGCTTCCTCAAGTTTGCCTGCTGACACATAAGTCAGTGGCATACTaGCTGACTGACTTTTGGCCC +
Preference number: 4 (lower is better)
Translates to: PLPGEIEPGLPQVCLLTHKSVAY*LTDFWP
Trigger: GGGCCAAAAGTCAGTCAGGCAGTATGCCACTGACTT...ATGTGTCAGCAGGCAAACTTGAGGAAGCCCTGGTTCTATTTCACCTGGCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp GTCCCTACTCTGATTGTCAGGGCAGGTCTTAGGCATGTGGGTGAAAGAGAAGGTGGGCTTCCTCAAGTTTaGCTGCTGACACATGGCAAG +
Preference number: 4 (lower is better)
Translates to: VPTLIVRAGLRHVGEREGGLPQV*LLTHGK
Trigger: CTTGCCATGTGTCAGCAGGCAAACTTGAGGAAGCCC...ACCTTCTCTTTCACCCACATGCCTAAGACCTGCCCTGACAATCAGAGTAGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp ATGGAATGGGTCCAGGAACCAGTCCTCCAGTTAGCGGTCGAGTCAGATATCACATGGAGCTCTCCTCAGTaGCGTGGACATCTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: MEWVQEPVLQLAVESDITWSSPQ*RGHLSR
Trigger: TCTGGAAAGATGTCCACGCCACTGAGGAGAGCTCCA...TGTGATATCTGACTCGACCGCTAACTGGAGGACTGGTTCCTGGACCCATTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp TTACAAGGGTGGTATAGGAGTGGGCATCGCTCTCCTTATAGGCTCCCCTGCCAGTCAATCCTGAGGCCATaGTTCTCATTTGTGGCATGG +
Preference number: 4 (lower is better)
Translates to: LQGWYRSGHRSPYRLPCQSILRP*FSFVAW
Trigger: CCATGCCACAAATGAGAACCATGGCCTCAGGATTGA...CTGGCAGGGGAGCCTATAAGGAGAGCGATGCCCACTCCTATACCACCCTTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp CCAGAGGTCAGAGCTAGAGAACCCCCACTGAGGGACAAGACAAAGGCCATAAACGTTGATCCAGAGGTTTaGGCTGTCATTAGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: PEVRAREPPLRDKTKAINVDPEV*AVISGV
Trigger: CACCCCACTAATGACAGCCCAAACCTCTGGATCAAC...GTTTATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAGCTCTGACCTCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp GGCATATGGGGCAAGTCTACTGGGTTACAAGGGTGGTATAGGAGTGGGCATCGCCTCTCATTAGCAGTGTaGGCATTGCTTCAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: GIWGKSTGLQGWYRSGHRLSLAV*ALLQKL
Trigger: CAGCTTCTGAAGCAATGCCCACACTGCTAATGAGAG...GCGATGCCCACTCCTATACCACCCTTGTAACCCAGTAGACTTGCCCCATATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp GGCATATGGGGCAAGTCTACTGGGTTACAAGGGTGGTATAGGAGTGGGCATCGCATCTTGGGTGCTCATTaGCTGACTGAGCATCTTTCC +
Preference number: 4 (lower is better)
Translates to: GIWGKSTGLQGWYRSGHRILGAH*LTEHLS
Trigger: GGAAAGATGCTCAGTCAGCCAATGAGCACCCAAGAT...GCGATGCCCACTCCTATACCACCCTTGTAACCCAGTAGACTTGCCCCATATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp GGTGGTGATGGGAGTTCAGAACCTCATACACCATACACTCTTGTAGTCCCTACTTCCCTCCAGCGGTCATaGACTTCATGGGCGACATGG +
Preference number: 4 (lower is better)
Translates to: GGDGSSEPHTPYTLVVPTSLQRS*TSWATW
Trigger: CCATGTCGCCCATGAAGTCCATGACCGCTGGAGGGA...AGTAGGGACTACAAGAGTGTATGGTGTATGAGGTTCTGAACTCCCATCACCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp ACAGGGCAAGGACCCTGGAGACCCATTTTAGGTGCTATGAGTTGGGGCATATGGCCAGGCTCTCACTGTTaGTGTGGACATCACATCAGA +
Preference number: 4 (lower is better)
Translates to: TGQGPWRPILGAMSWGIWPGSHC*CGHHIR
Trigger: TCTGATGTGATGTCCACACCAACAGTGAGAGCCTGG...CCATATGCCCCAACTCATAGCACCTAAAATGGGTCTCCAGGGTCCTTGCCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp CCCCTGCCAGGTGAAATAGAACCAGGGCTTCCTCAAGTTTGCCTGCTGACACATACATTGCTCCAGAGATaGGAGCCTTCACTTGTGGCA +
Preference number: 4 (lower is better)
Translates to: PLPGEIEPGLPQVCLLTHTLLQR*EPSLVA
Trigger: TGCCACAAGTGAAGGCTCCCATCTCTGGAGCAATGT...ATGTGTCAGCAGGCAAACTTGAGGAAGCCCTGGTTCTATTTCACCTGGCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp GTCCCTACTCTGATTGTCAGGGCAGGTCTTAGGCATGTGGGTGAAAGAGAAGGTTCCCTCCAGAGACCATaGCTGTTGTTTGTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: VPTLIVRAGLRHVGEREGSLQRP*LLFVQW
Trigger: CCACTGCACAAACAACAGCCATGGTCTCTGGAGGGA...ACCTTCTCTTTCACCCACATGCCTAAGACCTGCCCTGACAATCAGAGTAGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp GGCATATGGGGCAAGTCTACTGGGTTACAAGGGTGGTATAGGAGTGGGCATCGCCTGTCATTTGTGGCATaGACATACCCATGCCACATC +
Preference number: 4 (lower is better)
Translates to: GIWGKSTGLQGWYRSGHRLSFVA*TYPCHI
Trigger: GATGTGGCATGGGTATGTCCATGCCACAAATGACAG...GCGATGCCCACTCCTATACCACCCTTGTAACCCAGTAGACTTGCCCCATATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp AATGGAATGGGTCCAGGAACCAGTCCTCCAGTTAGCGGTCGAGTCAGATATCACCAGTCATGTGCGATGTaGGCTTTGATCCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: NGMGPGTSPPVSGRVRYHQSCAM*ALIQRL
Trigger: CAGCCTCTGGATCAAAGCCCACATCGCACATGACTG...GTGATATCTGACTCGACCGCTAACTGGAGGACTGGTTCCTGGACCCATTCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp AATGGAATGGGTCCAGGAACCAGTCCTCCAGTTAGCGGTCGAGTCAGATATCACGAGGTAGCAGAGTGCTaGGGTCAACATTCCGAAGGA +
Preference number: 4 (lower is better)
Translates to: NGMGPGTSPPVSGRVRYHEVAEC*GQHSEG
Trigger: TCCTTCGGAATGTTGACCCCAGCACTCTGCTACCTC...GTGATATCTGACTCGACCGCTAACTGGAGGACTGGTTCCTGGACCCATTCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp ACAGGGCAAGGACCCTGGAGACCCATTTTAGGTGCTATGAGTTGGGGCATATGGGTCCTTCCAGAAACCTaGTCCGTAGAATGGCATCAG +
Preference number: 4 (lower is better)
Translates to: TGQGPWRPILGAMSWGIWVLPET*SVEWHQ
Trigger: CTGATGCCATTCTACGGACCAGGTTTCTGGAAGGAC...CCATATGCCCCAACTCATAGCACCTAAAATGGGTCTCCAGGGTCCTTGCCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp CACCCAGAGGTCAGAGCTAGAGAACCCCCACTGAGGGACAAGACAAAGGCCATATTGCCTGCTGACACATaGCAAGATACGCTAAGGGTT +
Preference number: 4 (lower is better)
Translates to: HPEVRAREPPLRDKTKAILPADT*QDTLRV
Trigger: AACCCTTAGCGTATCTTGCCATGTGTCAGCAGGCAA...TATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAGCTCTGACCTCTGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp CCAGAGGTCAGAGCTAGAGAACCCCCACTGAGGGACAAGACAAAGGCCATAAACTGGCATTGCCAATGGTaGTATCTCTGCAGAATCTGG +
Preference number: 4 (lower is better)
Translates to: PEVRAREPPLRDKTKAINWHCQW*YLCRIW
Trigger: CCAGATTCTGCAGAGATATCACCATTGGCAATGCCA...GTTTATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAGCTCTGACCTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp TTACAAGGGTGGTATAGGAGTGGGCATCGCTCTCCTTATAGGCTCCCCTGCCAGCATTGCCTCAGAGGATaGAGTGCTCATTATAGGTGT +
Preference number: 4 (lower is better)
Translates to: LQGWYRSGHRSPYRLPCQHCLRG*SAHYRC
Trigger: ACACCTATAATGAGCACTTCATCCTCTGAGGCAATG...CTGGCAGGGGAGCCTATAAGGAGAGCGATGCCCACTCCTATACCACCCTTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp CTTGTAGTCCCTACTCTGATTGTCAGGGCAGGTCTTAGGCATGTGGGTGAAAGAGTCTACATTTTGTGTTaGCCATGGGGACATCGCCCC +
Preference number: 4 (lower is better)
Translates to: LVVPTLIVRAGLRHVGERVYILC*PWGHRP
Trigger: GGGGCGATGTCCCCATGGTCAACACAAAATGTAGAC...TCTTTCACCCACATGCCTAAGACCTGCCCTGACAATCAGAGTAGGGACTACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp GGTGGTGATGGGAGTTCAGAACCTCATACACCATACACTCTTGTAGTCCCTACTTGGGACTGTCATCAGTaGGGTGGTCATGGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: GGDGSSEPHTPYTLVVPTWDCHQ*GGHGSR
Trigger: TCTGGAGCCATGACCACCTCACTGATGACAGTCCCA...AGTAGGGACTACAAGAGTGTATGGTGTATGAGGTTCTGAACTCCCATCACCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp AACAGGGCAAGGACCCTGGAGACCCATTTTAGGTGCTATGAGTTGGGGCATATGTCTAGAGGCTGTGGCTaGCATTTGCTCTGTGGACAT +
Preference number: 4 (lower is better)
Translates to: NRARTLETHFRCYELGHMSRGCG*HLLCGH
Trigger: ATGTCCACAGAGCAAATGTCAGCCACAGCCTCTAGA...CATATGCCCCAACTCATAGCACCTAAAATGGGTCTCCAGGGTCCTTGCCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp CCAGAGGTCAGAGCTAGAGAACCCCCACTGAGGGACAAGACAAAGGCCATAAACTGCTCATTGGCTGACTaGGCATCTTTCCAGACACTT +
Preference number: 4 (lower is better)
Translates to: PEVRAREPPLRDKTKAINCSLAD*ASFQTL
Trigger: AAGTGTCTGGAAAGATGCTCAGTCAGCCAATGAGCA...GTTTATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAGCTCTGACCTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp GTCCCTACTCTGATTGTCAGGGCAGGTCTTAGGCATGTGGGTGAAAGAGAAGGTTCTGCTGCTCCCAGATaGAGAGATACCAGAAATGCC +
Preference number: 4 (lower is better)
Translates to: VPTLIVRAGLRHVGEREGSAAPR*RDTRNA
Trigger: GGCATTTCTGGTATCTCTTCATCTGGGAGCAGCAGA...ACCTTCTCTTTCACCCACATGCCTAAGACCTGCCCTGACAATCAGAGTAGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp GGTGGTGATGGGAGTTCAGAACCTCATACACCATACACTCTTGTAGTCCCTACTTGGCAGAACCTGGCTTaGGTTGCCTGGGGAATCCTT +
Preference number: 4 (lower is better)
Translates to: GGDGSSEPHTPYTLVVPTWQNLA*VAWGIL
Trigger: AAGGATTCCCCAGGCAACTCAAGCCAGGTTCTGCCA...AGTAGGGACTACAAGAGTGTATGGTGTATGAGGTTCTGAACTCCCATCACCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp CCCCTGCCAGGTGAAATAGAACCAGGGCTTCCTCAAGTTTGCCTGCTGACACATCTACAGAAGGCCATCTaGTTGTTTTGGGGCTCAACA +
Preference number: 4 (lower is better)
Translates to: PLPGEIEPGLPQVCLLTHLQKAI*LFWGST
Trigger: TGTTGAGCCCCAAAACAAGCAGATGGCCTTCTGTAG...ATGTGTCAGCAGGCAAACTTGAGGAAGCCCTGGTTCTATTTCACCTGGCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp AACAGGGCAAGGACCCTGGAGACCCATTTTAGGTGCTATGAGTTGGGGCATATGAGAGCCTGTGGGCATTaGTCCAGAAGTTTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: NRARTLETHFRCYELGHMRACGH*SRSFGH
Trigger: ATGGCCAAAACTTCTGGAGCAATGCCCACAGGCTCT...CATATGCCCCAACTCATAGCACCTAAAATGGGTCTCCAGGGTCCTTGCCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp AATGGAATGGGTCCAGGAACCAGTCCTCCAGTTAGCGGTCGAGTCAGATATCACTGGTTGGGTGGACATTaGTCCAGAAGTTGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: NGMGPGTSPPVSGRVRYHWLGGH*SRSWSS
Trigger: AGAGCTCCAACTTCTGGAGCAATGTCCACCCAACCA...GTGATATCTGACTCGACCGCTAACTGGAGGACTGGTTCCTGGACCCATTCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp AAGTCTACTGGGTTACAAGGGTGGTATAGGAGTGGGCATCGCTCTCCTTATAGGAATGTGAGAGGTGGATaGCTCTCCAGAGTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: KSTGLQGWYRSGHRSPYRNVRGG*LSRVCG
Trigger: GCCACAGACTCTGGAGAGGCATCCACCTCTCACATT...CCTATAAGGAGAGCGATGCCCACTCCTATACCACCCTTGTAACCCAGTAGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp CCAGGTGAAATAGAACCAGGGCTTCCTCAAGTTTGCCTGCTGACACATGGCAAGGAACCACCTCTCTGCTaGTCCCAGATGAAGAGATAC +
Preference number: 4 (lower is better)
Translates to: PGEIEPGLPQVCLLTHGKEPPLC*SQMKRY
Trigger: GTATCTCTTCATCTGGGAGCAGCAGAGAGGTGGTTC...CTTGCCATGTGTCAGCAGGCAAACTTGAGGAAGCCCTGGTTCTATTTCACCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp GTCCCTACTCTGATTGTCAGGGCAGGTCTTAGGCATGTGGGTGAAAGAGAAGGTGAACCTGGCTTGAGTTaGCTGGGGAATCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: VPTLIVRAGLRHVGEREGEPGLS*LGNPSL
Trigger: AAGAGAAGGATTCCCCAGGCAACTCAAGCCAGGTTC...ACCTTCTCTTTCACCCACATGCCTAAGACCTGCCCTGACAATCAGAGTAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp AAGTCTACTGGGTTACAAGGGTGGTATAGGAGTGGGCATCGCTCTCCTTATAGGGGGCTTCCTCAAGTTTaGCTGCTGACACATGGCAAG +
Preference number: 4 (lower is better)
Translates to: KSTGLQGWYRSGHRSPYRGLPQV*LLTHGK
Trigger: CTTGCCATGTGTCAGCAGGCAAACTTGAGGAAGCCC...CCTATAAGGAGAGCGATGCCCACTCCTATACCACCCTTGTAACCCAGTAGACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp ACAGGGCAAGGACCCTGGAGACCCATTTTAGGTGCTATGAGTTGGGGCATATGGTCTGGTCTCTGTCATTaGTCTACAGAAGGCCATCTG +
Preference number: 4 (lower is better)
Translates to: TGQGPWRPILGAMSWGIWSGLCH*STEGHL
Trigger: CAGATGGCCTTCTGTAGACCAATGACAGAGACCAGA...CCATATGCCCCAACTCATAGCACCTAAAATGGGTCTCCAGGGTCCTTGCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp CCAGGTGAAATAGAACCAGGGCTTCCTCAAGTTTGCCTGCTGACACATGGCAAGATGTCATCAACTGTGTaGATGTCCCTCCAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: PGEIEPGLPQVCLLTHGKMSSTV*MSLQGL
Trigger: CAGACCCTGGAGGGACATCCACACAGTTGATGACAT...CTTGCCATGTGTCAGCAGGCAAACTTGAGGAAGCCCTGGTTCTATTTCACCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp TTACAAGGGTGGTATAGGAGTGGGCATCGCTCTCCTTATAGGCTCCCCTGCCAGTTAGAGGTGCAGACATaGTGTCAAAGACTGGAGATG +
Preference number: 4 (lower is better)
Translates to: LQGWYRSGHRSPYRLPCQLEVQT*CQRLEM
Trigger: CATCTCCAGTCTTTGACACCATGTCTGCACCTCTAA...CTGGCAGGGGAGCCTATAAGGAGAGCGATGCCCACTCCTATACCACCCTTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp GGTGGTGATGGGAGTTCAGAACCTCATACACCATACACTCTTGTAGTCCCTACTCTGGCATCGTTTGGGTaGGCATCACTCCAGAGGGTA +
Preference number: 4 (lower is better)
Translates to: GGDGSSEPHTPYTLVVPTLASFG*ASLQRV
Trigger: TACCCTCTGGAGTGATGCCCACCCAAACGATGCCAG...AGTAGGGACTACAAGAGTGTATGGTGTATGAGGTTCTGAACTCCCATCACCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp ACTGGCCTCGGTGGTGATGGGAGTTCAGAACCTCATACACCATACACTCTTGTACATTGCTCCAGAAGTTaGAGCTCTCCTCAGTGGCGT +
Preference number: 4 (lower is better)
Translates to: TGLGGDGSSEPHTPYTLVHCSRS*SSPQWR
Trigger: ACGCCACTGAGGAGAGCTCCAACTTCTGGAGCAATG...TACAAGAGTGTATGGTGTATGAGGTTCTGAACTCCCATCACCACCGAGGCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp TTACAAGGGTGGTATAGGAGTGGGCATCGCTCTCCTTATAGGCTCCCCTGCCAGCTGTCAATTGTGGCATaGACATTGTTTCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LQGWYRSGHRSPYRLPCQLSIVA*TLFQRL
Trigger: CAGCCTCTGAAACAATGTCCATGCCACAATTGACAG...CTGGCAGGGGAGCCTATAAGGAGAGCGATGCCCACTCCTATACCACCCTTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp ACAGGGCAAGGACCCTGGAGACCCATTTTAGGTGCTATGAGTTGGGGCATATGGTTGCTCCAGAAGTCATaGCTTTCATCTGTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: TGQGPWRPILGAMSWGIWLLQKS*LSSVLQ
Trigger: CTGCAGCACAGATGAAAGCCATGACTTCTGGAGCAA...CCATATGCCCCAACTCATAGCACCTAAAATGGGTCTCCAGGGTCCTTGCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp CCCCTGCCAGGTGAAATAGAACCAGGGCTTCCTCAAGTTTGCCTGCTGACACATTTGCTCCAGAAGTCATaGCTTTCATCTGTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: PLPGEIEPGLPQVCLLTHLLQKS*LSSVLQ
Trigger: CTGCAGCACAGATGAAAGCCATGACTTCTGGAGCAA...ATGTGTCAGCAGGCAAACTTGAGGAAGCCCTGGTTCTATTTCACCTGGCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp AACAGGGCAAGGACCCTGGAGACCCATTTTAGGTGCTATGAGTTGGGGCATATGTCATTCCAGAGGCTGTaGCTGTCATTTGTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: NRARTLETHFRCYELGHMSFQRL*LSFVEQ
Trigger: CTGCTCCACAAATGACAGCCACAGCCTCTGGAATGA...CATATGCCCCAACTCATAGCACCTAAAATGGGTCTCCAGGGTCCTTGCCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp CCAGAGGTCAGAGCTAGAGAACCCCCACTGAGGGACAAGACAAAGGCCATAAACCTCTCATTAACTCTGTaGACACAGTCTCACAGGCTG +
Preference number: 4 (lower is better)
Translates to: PEVRAREPPLRDKTKAINLSLTL*TQSHRL
Trigger: CAGCCTGTGAGACTGTGTCCACAGAGTTAATGAGAG...GTTTATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAGCTCTGACCTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp GTCCCTACTCTGATTGTCAGGGCAGGTCTTAGGCATGTGGGTGAAAGAGAAGGTTCCAAAGGCTGTCTGTaGTGTGGACATTGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: VPTLIVRAGLRHVGEREGSKGCL*CGHCSR
Trigger: CCTGGAACAATGTCCACACCACAGACAGCCTTTGGA...ACCTTCTCTTTCACCCACATGCCTAAGACCTGCCCTGACAATCAGAGTAGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp ATGGAATGGGTCCAGGAACCAGTCCTCCAGTTAGCGGTCGAGTCAGATATCACATCCAAAGGCTGTCTGTaGTGTGGACATTGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: MEWVQEPVLQLAVESDITSKGCL*CGHCSR
Trigger: CCTGGAACAATGTCCACACCACAGACAGCCTTTGGA...TGTGATATCTGACTCGACCGCTAACTGGAGGACTGGTTCCTGGACCCATTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp GTCCCTACTCTGATTGTCAGGGCAGGTCTTAGGCATGTGGGTGAAAGAGAAGGTCAGTTTCAGGAGTTGTaGCAGTCATGTGCGATGTGG +
Preference number: 4 (lower is better)
Translates to: VPTLIVRAGLRHVGEREGQFQEL*QSCAMW
Trigger: CCACATCGCACATGACTGCCACAACTCCTGAAACTG...ACCTTCTCTTTCACCCACATGCCTAAGACCTGCCCTGACAATCAGAGTAGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp CCCCTGCCAGGTGAAATAGAACCAGGGCTTCCTCAAGTTTGCCTGCTGACACATCACTTCCTTTGGTGGTaGTTTCGCAGTTTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: PLPGEIEPGLPQVCLLTHHFLWW*FRSFRS
Trigger: ACTCCTGAAACTGCGAAACCACCACCAAAGGAAGTG...ATGTGTCAGCAGGCAAACTTGAGGAAGCCCTGGTTCTATTTCACCTGGCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp GTCCCTACTCTGATTGTCAGGGCAGGTCTTAGGCATGTGGGTGAAAGAGAAGGTCAACATTCCGAAGGATaGCACTTCCTTTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: VPTLIVRAGLRHVGEREGQHSEG*HFLWWW
Trigger: CCACCACCAAAGGAAGTGCCATCCTTCGGAATGTTG...ACCTTCTCTTTCACCCACATGCCTAAGACCTGCCCTGACAATCAGAGTAGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp AAGTCTACTGGGTTACAAGGGTGGTATAGGAGTGGGCATCGCTCTCCTTATAGGGAGGTAGCAGAGTGCTaGGGTCAACATTCCGAAGGA +
Preference number: 4 (lower is better)
Translates to: KSTGLQGWYRSGHRSPYREVAEC*GQHSEG
Trigger: TCCTTCGGAATGTTGACCCCAGCACTCTGCTACCTC...CCTATAAGGAGAGCGATGCCCACTCCTATACCACCCTTGTAACCCAGTAGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp CTTGTAGTCCCTACTCTGATTGTCAGGGCAGGTCTTAGGCATGTGGGTGAAAGATGGCCCTGTTTGGGATaGCAAAGAACAGCACTGAGG +
Preference number: 4 (lower is better)
Translates to: LVVPTLIVRAGLRHVGERWPCLG*QRTALR
Trigger: CCTCAGTGCTGTTCTTTGCCATCCCAAACAGGGCCA...TCTTTCACCCACATGCCTAAGACCTGCCCTGACAATCAGAGTAGGGACTACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp CCCCTGCCAGGTGAAATAGAACCAGGGCTTCCTCAAGTTTGCCTGCTGACACATTTGCCTGCTGACACATaGCAAGATACGCTAAGGGTT +
Preference number: 4 (lower is better)
Translates to: PLPGEIEPGLPQVCLLTHLPADT*QDTLRV
Trigger: AACCCTTAGCGTATCTTGCCATGTGTCAGCAGGCAA...ATGTGTCAGCAGGCAAACTTGAGGAAGCCCTGGTTCTATTTCACCTGGCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp GAACCCCCACTGAGGGACAAGACAAAGGCCATAAACAACAGATCAAGAGGTCAGACTGGGTTACAAGGGTaGTATAGGAGTGGGCATCGC +
Preference number: 4 (lower is better)
Translates to: EPPLRDKTKAINNRSRGQTGLQG*YRSGHR
Trigger: GCGATGCCCACTCCTATACCACCCTTGTAACCCAGT...CTGACCTCTTGATCTGTTGTTTATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp GGTGGTGATGGGAGTTCAGAACCTCATACACCATACACTCTTGTAGTCCCTACTCTGTCTTCAAGTCTCTaGAGGGCCACAATGCCTTGC +
Preference number: 4 (lower is better)
Translates to: GGDGSSEPHTPYTLVVPTLSSSL*RATMPC
Trigger: GCAAGGCATTGTGGCCCTTCAGAGACTTGAAGACAG...AGTAGGGACTACAAGAGTGTATGGTGTATGAGGTTCTGAACTCCCATCACCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465301.2
CDS-3UTR TCA 90 bp CACCCAGAGGTCAGAGCTAGAGAACCCCCACTGAGGGACAAGACAAAGGCCATACCCTCATTGTATTGTTaGATCGCAGTGAATGTAAGG +
Preference number: 4 (lower is better)
Translates to: HPEVRAREPPLRDKTKAIPSLYC*IAVNVR
Trigger: CCTTACATTCACTGCGATTCAACAATACAATGAGGG...TATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAGCTCTGACCTCTGGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp AAGTCTACTGGGTTACAAGGGTGGTATAGGAGTGGGCATCGCTCTCCTTATAGGCATTACCCCATACTCTaGAGTGGACAGCAATGGGGA +
Preference number: 4 (lower is better)
Translates to: KSTGLQGWYRSGHRSPYRHYPIL*SGQQWG
Trigger: TCCCCATTGCTGTCCACTTCAGAGTATGGGGTAATG...CCTATAAGGAGAGCGATGCCCACTCCTATACCACCCTTGTAACCCAGTAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp AATGGAATGGGTCCAGGAACCAGTCCTCCAGTTAGCGGTCGAGTCAGATATCACTGCAGATGTCAATCCTaGGGCCATGGTTCTCATTTG +
Preference number: 4 (lower is better)
Translates to: NGMGPGTSPPVSGRVRYHCRCQS*GHGSHL
Trigger: CAAATGAGAACCATGGCCTCAGGATTGACATCTGCA...GTGATATCTGACTCGACCGCTAACTGGAGGACTGGTTCCTGGACCCATTCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp ACTGGCCTCGGTGGTGATGGGAGTTCAGAACCTCATACACCATACACTCTTGTAGCTGTGATGTTAATGTaGGAGGTGGATGCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: TGLGGDGSSEPHTPYTLVAVMLM*EVDASP
Trigger: TGGAGAGGCATCCACCTCTCACATTAACATCACAGC...TACAAGAGTGTATGGTGTATGAGGTTCTGAACTCCCATCACCACCGAGGCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp CCCCTGCCAGGTGAAATAGAACCAGGGCTTCCTCAAGTTTGCCTGCTGACACATGGCAAAGAACAGCACTaGGGATGTCTATCTCAGATA +
Preference number: 4 (lower is better)
Translates to: PLPGEIEPGLPQVCLLTHGKEQH*GCLSQI
Trigger: TATCTGAGATAGACATCCTCAGTGCTGTTCTTTGCC...ATGTGTCAGCAGGCAAACTTGAGGAAGCCCTGGTTCTATTTCACCTGGCAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp ACTGGCCTCGGTGGTGATGGGAGTTCAGAACCTCATACACCATACACTCTTGTAGGTGGTAACAGCTTCTaGGAGTCCTTCCAGAAACCT +
Preference number: 4 (lower is better)
Translates to: TGLGGDGSSEPHTPYTLVGGNSF*ESFQKP
Trigger: AGGTTTCTGGAAGGACTCTCAGAAGCTGTTACCACC...TACAAGAGTGTATGGTGTATGAGGTTCTGAACTCCCATCACCACCGAGGCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp AAGTCTACTGGGTTACAAGGGTGGTATAGGAGTGGGCATCGCTCTCCTTATAGGCTCAAGTTTGCCTGCTaGCACATGGCAAGATACGCT +
Preference number: 4 (lower is better)
Translates to: KSTGLQGWYRSGHRSPYRLKFAC*HMARYA
Trigger: AGCGTATCTTGCCATGTGTCAGCAGGCAAACTTGAG...CCTATAAGGAGAGCGATGCCCACTCCTATACCACCCTTGTAACCCAGTAGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp ACTGGCCTCGGTGGTGATGGGAGTTCAGAACCTCATACACCATACACTCTTGTAAACAGCCAAGGGGAGTaGGAGCAATCAACAACTGAG +
Preference number: 4 (lower is better)
Translates to: TGLGGDGSSEPHTPYTLVNSQGE*EQSTTE
Trigger: CTCAGTTGTTGATTGCTCTCACTCCCCTTGGCTGTT...TACAAGAGTGTATGGTGTATGAGGTTCTGAACTCCCATCACCACCGAGGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp CTTGTAGTCCCTACTCTGATTGTCAGGGCAGGTCTTAGGCATGTGGGTGAAAGAAACAGCCAAGGGGAGTaGGAGCAATCAACAACTGAG +
Preference number: 4 (lower is better)
Translates to: LVVPTLIVRAGLRHVGERNSQGE*EQSTTE
Trigger: CTCAGTTGTTGATTGCTCTCACTCCCCTTGGCTGTT...TCTTTCACCCACATGCCTAAGACCTGCCCTGACAATCAGAGTAGGGACTACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp GAACCCCCACTGAGGGACAAGACAAAGGCCATAAACAACAGATCAAGAGGTCAGTTGCTTCAGAGTCCGTaGCTGACATTAGCAGCGAAG +
Preference number: 4 (lower is better)
Translates to: EPPLRDKTKAINNRSRGQLLQSP*LTLAAK
Trigger: CTTCGCTGCTAATGTCAGGCACGGACTCTGAAGCAA...CTGACCTCTTGATCTGTTGTTTATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp ACTGGCCTCGGTGGTGATGGGAGTTCAGAACCTCATACACCATACACTCTTGTATTGTGGCATGGACATTaGTTCAGAGACAGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: TGLGGDGSSEPHTPYTLVLWHGH*FRDRGS
Trigger: AGAGCCCCTGTCTCTGAAGCAATGTCCATGCCACAA...TACAAGAGTGTATGGTGTATGAGGTTCTGAACTCCCATCACCACCGAGGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp GGTGGTGATGGGAGTTCAGAACCTCATACACCATACACTCTTGTAGTCCCTACTGTTGGGGAATTCATCTaGATCCCTCCAGCGGTCATG +
Preference number: 4 (lower is better)
Translates to: GGDGSSEPHTPYTLVVPTVGEFI*IPPAVM
Trigger: CATGACCGCTGGAGGGATGCAGATGAATTCCCCAAC...AGTAGGGACTACAAGAGTGTATGGTGTATGAGGTTCTGAACTCCCATCACCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp CCACCACCTGAAGGCAAACACTGCTCACATTATGTTCTAGCTATCTATGCCTGTGCATGGACATACCCATaGCACATCCAGAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: PPPEGKHCSHYVLAIYACAWTYP*HIQRLW
Trigger: CCACAGCCTCTGGATGTGGCATGGGTATGTCCATGC...ACAGGCATAGATAGCTAGAACATAATGTGAGCAGTGTTTGCCTTCAGGTGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp GGTGGTGATGGGAGTTCAGAACCTCATACACCATACACTCTTGTAGTCCCTACTAATGTGAGAGGTGGATaGCTCTCCAGAGTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: GGDGSSEPHTPYTLVVPTNVRGG*LSRVCG
Trigger: GCCACAGACTCTGGAGAGGCATCCACCTCTCACATT...AGTAGGGACTACAAGAGTGTATGGTGTATGAGGTTCTGAACTCCCATCACCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp ACAGGGCAAGGACCCTGGAGACCCATTTTAGGTGCTATGAGTTGGGGCATATGGATAGGGAGTCATATATaGCCTGGGATCTTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: TGQGPWRPILGAMSWGIWIGSHI*PGIFSG
Trigger: TCCTGAGAAGATCCCAGGGCATATATGACTCCCTAT...CCATATGCCCCAACTCATAGCACCTAAAATGGGTCTCCAGGGTCCTTGCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp TTACAAGGGTGGTATAGGAGTGGGCATCGCTCTCCTTATAGGCTCCCCTGCCAGAGATATGATTTATCCTaGCTAGACTTCTCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: LQGWYRSGHRSPYRLPCQRYDLS*LDFSLD
Trigger: GTCCAGGGAGAAGTCTAGGCAGGATAAATCATATCT...CTGGCAGGGGAGCCTATAAGGAGAGCGATGCCCACTCCTATACCACCCTTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp AGAGGTAAGGTGGGATGTGCCTGGAGCGGGAGGCTGAAGGGTGAAGGCAACAAGAAGAGTTTAGCCCAATaGCTGTCACATGATACATTA +
Preference number: 4 (lower is better)
Translates to: RGKVGCAWSGRLKGEGNKKSLAQ*LSHDTL
Trigger: TAATGTATCATGTGACAGGCATTGGGCTAAACTCTT...CTTGTTGCCTTCACCCTTCAGCCTCCCGCTCCAGGCACATCCCACCTTACCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp AATGGAATGGGTCCAGGAACCAGTCCTCCAGTTAGCGGTCGAGTCAGATATCACTCTGGTCTCTGTCATTaGTCTACAGAAGGCCATCTG +
Preference number: 4 (lower is better)
Translates to: NGMGPGTSPPVSGRVRYHSGLCH*STEGHL
Trigger: CAGATGGCCTTCTGTAGACCAATGACAGAGACCAGA...GTGATATCTGACTCGACCGCTAACTGGAGGACTGGTTCCTGGACCCATTCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp CCAGAGGTCAGAGCTAGAGAACCCCCACTGAGGGACAAGACAAAGGCCATAAACTTAGAGGTGCAGACATaGTGTCAAAGACTGGAGATG +
Preference number: 4 (lower is better)
Translates to: PEVRAREPPLRDKTKAINLEVQT*CQRLEM
Trigger: CATCTCCAGTCTTTGACACCATGTCTGCACCTCTAA...GTTTATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAGCTCTGACCTCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp ACTGGCCTCGGTGGTGATGGGAGTTCAGAACCTCATACACCATACACTCTTGTACCCCATACTCTGAAGTaGACAGCAATGGGGACAATG +
Preference number: 4 (lower is better)
Translates to: TGLGGDGSSEPHTPYTLVPHTLK*TAMGTM
Trigger: CATTGTCCCCATTGCTGTCCACTTCAGAGTATGGGG...TACAAGAGTGTATGGTGTATGAGGTTCTGAACTCCCATCACCACCGAGGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp TTCAGAACCTCATACACCATACACTCTTGTAGTCCCTACTCTGATTGTCAGGGCCACCACTCCAGAGGATaGAGCTGGCATTGCCAATGG +
Preference number: 4 (lower is better)
Translates to: FRTSYTIHSCSPYSDCQGHHSRG*SWHCQW
Trigger: CCATTGGCAATGCCAGCTCCATCCTCTGGAGTGGTG...GCCCTGACAATCAGAGTAGGGACTACAAGAGTGTATGGTGTATGAGGTTCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp CACCCAGAGGTCAGAGCTAGAGAACCCCCACTGAGGGACAAGACAAAGGCCATACAGTCATTAGCACTTTaGACATTGCTTCGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: HPEVRAREPPLRDKTKAIQSLAL*TLLRCL
Trigger: AAGACACCGAAGCAATGTCCAAAGTGCTAATGACTG...TATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAGCTCTGACCTCTGGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp GGTGGTGATGGGAGTTCAGAACCTCATACACCATACACTCTTGTAGTCCCTACTTGGGTGCTTGTTGGCTaGGGTGATGTACCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: GGDGSSEPHTPYTLVVPTWVLVG*GDVPPE
Trigger: TTCTGGAGGTACATCACCCCAGCCAACAAGCACCCA...AGTAGGGACTACAAGAGTGTATGGTGTATGAGGTTCTGAACTCCCATCACCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp CTTGTAGTCCCTACTCTGATTGTCAGGGCAGGTCTTAGGCATGTGGGTGAAAGACTGACAGTAGCGGTGTaGACATTACTTCAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: LVVPTLIVRAGLRHVGERLTVAV*TLLQSL
Trigger: CAGGCTCTGAAGTAATGTCCACACCGCTACTGTCAG...TCTTTCACCCACATGCCTAAGACCTGCCCTGACAATCAGAGTAGGGACTACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp TTCAGAACCTCATACACCATACACTCTTGTAGTCCCTACTCTGATTGTCAGGGCCTGGCATCGTTTGGGTaGGCATCACTCCAGAGGGTA +
Preference number: 4 (lower is better)
Translates to: FRTSYTIHSCSPYSDCQGLASFG*ASLQRV
Trigger: TACCCTCTGGAGTGATGCCCACCCAAACGATGCCAG...GCCCTGACAATCAGAGTAGGGACTACAAGAGTGTATGGTGTATGAGGTTCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp AAGACAAAGGCCATAAACAACAGATCAAGAGGTCAGAAGCTGACAACACAAGAACCCAGAGCCTGGGGCTaGCATCGTTTGGGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: KTKAINNRSRGQKLTTQEPRAWG*HRLGGH
Trigger: ATGCCCACCCAAACGATGCCAGCCCCAGGCTCTGGG...TTCTTGTGTTGTCAGCTTCTGACCTCTTGATCTGTTGTTTATGGCCTTTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp TTTGAGGTAAGATATGATTTATCCTGCCTAGACTTCTCCCTGGACCAAGAACTACATCGCCCCAGAGCCTaGGGCTGGCATCGTTTGGGT +
Preference number: 4 (lower is better)
Translates to: FEVRYDLSCLDFSLDQELHRPRA*GWHRLG
Trigger: ACCCAAACGATGCCAGCCCCAGGCTCTGGGGCGATG...TAGTTCTTGGTCCAGGGAGAAGTCTAGGCAGGATAAATCATATCTTACCTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp AACAGGGCAAGGACCCTGGAGACCCATTTTAGGTGCTATGAGTTGGGGCATATGGGCTGTTGCTCTCACTaGCGGATTAGACATCATTTC +
Preference number: 4 (lower is better)
Translates to: NRARTLETHFRCYELGHMGCCSH*RIRHHF
Trigger: GAAATGATGTCTAATCCGCCAGTGAGAGCAACAGCC...CATATGCCCCAACTCATAGCACCTAAAATGGGTCTCCAGGGTCCTTGCCCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp GAACCCCCACTGAGGGACAAGACAAAGGCCATAAACAACAGATCAAGAGGTCAGGTTGATCCAGAGGTTTaGGCTGTCATTAGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: EPPLRDKTKAINNRSRGQVDPEV*AVISGV
Trigger: CACCCCACTAATGACAGCCCAAACCTCTGGATCAAC...CTGACCTCTTGATCTGTTGTTTATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp AAGTCTACTGGGTTACAAGGGTGGTATAGGAGTGGGCATCGCTCTCCTTATAGGTCGTTCCTGAGGCTTTaGGTGTCATTAGTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: KSTGLQGWYRSGHRSPYRSFLRL*VSLVAW
Trigger: CCAAGCCACTAATGACACCCAAAGCCTCAGGAACGA...CCTATAAGGAGAGCGATGCCCACTCCTATACCACCCTTGTAACCCAGTAGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp GTCCCTACTCTGATTGTCAGGGCAGGTCTTAGGCATGTGGGTGAAAGAGAAGGTCTCTCATTAGCAGTGTaGGCATTGCTTCAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: VPTLIVRAGLRHVGEREGLSLAV*ALLQKL
Trigger: CAGCTTCTGAAGCAATGCCCACACTGCTAATGAGAG...ACCTTCTCTTTCACCCACATGCCTAAGACCTGCCCTGACAATCAGAGTAGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp AAGTCTACTGGGTTACAAGGGTGGTATAGGAGTGGGCATCGCTCTCCTTATAGGACTTCATGGGCGACATaGACATCCCTCCAGGATCTT +
Preference number: 4 (lower is better)
Translates to: KSTGLQGWYRSGHRSPYRTSWAT*TSLQDL
Trigger: AAGATCCTGGAGGGATGTCCATGTCGCCCATGAAGT...CCTATAAGGAGAGCGATGCCCACTCCTATACCACCCTTGTAACCCAGTAGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp ATGGAATGGGTCCAGGAACCAGTCCTCCAGTTAGCGGTCGAGTCAGATATCACACTCTCACTGTTGGTGTaGACATCACATCAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: MEWVQEPVLQLAVESDITLSLLV*TSHQRL
Trigger: CAACCTCTGATGTGATGTCCACACCAACAGTGAGAG...TGTGATATCTGACTCGACCGCTAACTGGAGGACTGGTTCCTGGACCCATTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp ACTGGCCTCGGTGGTGATGGGAGTTCAGAACCTCATACACCATACACTCTTGTACCAGGCTCTCACTGTTaGTGTGGACATCACATCAGA +
Preference number: 4 (lower is better)
Translates to: TGLGGDGSSEPHTPYTLVPGSHC*CGHHIR
Trigger: TCTGATGTGATGTCCACACCAACAGTGAGAGCCTGG...TACAAGAGTGTATGGTGTATGAGGTTCTGAACTCCCATCACCACCGAGGCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp TCTAGCTATCTATGCCTGTTTATAGACCAAGACCCTCATCAAGAGTGCTGGCCAGGGATCTCAGAGGCGTaGCTATCTCTCCAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: SSYLCLFIDQDPHQECWPGISEA*LSLQKL
Trigger: CAGCTTCTGGAGAGATAGCCACGCCTCTGAGATCCC...TGGCCAGCACTCTTGATGAGGGTCTTGGTCTATAAACAGGCATAGATAGCTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp ACTGGCCTCGGTGGTGATGGGAGTTCAGAACCTCATACACCATACACTCTTGTATTTGTGGAGCAGACATaGCTCCATAAGCTGGGGATC +
Preference number: 4 (lower is better)
Translates to: TGLGGDGSSEPHTPYTLVFVEQT*LHKLGI
Trigger: GATCCCCAGCTTATGGAGCCATGTCTGCTCCACAAA...TACAAGAGTGTATGGTGTATGAGGTTCTGAACTCCCATCACCACCGAGGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp CTTGTAGTCCCTACTCTGATTGTCAGGGCAGGTCTTAGGCATGTGGGTGAAAGATCATTCCAGAGGCTGTaGCTGTCATTTGTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: LVVPTLIVRAGLRHVGERSFQRL*LSFVEQ
Trigger: CTGCTCCACAAATGACAGCCACAGCCTCTGGAATGA...TCTTTCACCCACATGCCTAAGACCTGCCCTGACAATCAGAGTAGGGACTACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp AACAGGGCAAGGACCCTGGAGACCCATTTTAGGTGCTATGAGTTGGGGCATATGCTGTTGTTTGTGCAGTaGACATATGTCCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: NRARTLETHFRCYELGHMLLFVQ*TYVQRL
Trigger: CAGCCTCTGGACATATGTCCACTGCACAAACAACAG...CATATGCCCCAACTCATAGCACCTAAAATGGGTCTCCAGGGTCCTTGCCCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp CTTGTAGTCCCTACTCTGATTGTCAGGGCAGGTCTTAGGCATGTGGGTGAAAGACTGACATTAAAGGCATaGGCATTGTTCCAGAGGCCG +
Preference number: 4 (lower is better)
Translates to: LVVPTLIVRAGLRHVGERLTLKA*ALFQRP
Trigger: CGGCCTCTGGAACAATGCCCATGCCTTTAATGTCAG...TCTTTCACCCACATGCCTAAGACCTGCCCTGACAATCAGAGTAGGGACTACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp ACTGGCCTCGGTGGTGATGGGAGTTCAGAACCTCATACACCATACACTCTTGTATGGCACTTCCTTTGGTaGTGGTTTCGCAGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: TGLGGDGSSEPHTPYTLVWHFLW*WFRSFR
Trigger: CCTGAAACTGCGAAACCACCACCAAAGGAAGTGCCA...TACAAGAGTGTATGGTGTATGAGGTTCTGAACTCCCATCACCACCGAGGCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp CTTGTAGTCCCTACTCTGATTGTCAGGGCAGGTCTTAGGCATGTGGGTGAAAGACAACATTCCGAAGGATaGCACTTCCTTTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LVVPTLIVRAGLRHVGERQHSEG*HFLWWW
Trigger: CCACCACCAAAGGAAGTGCCATCCTTCGGAATGTTG...TCTTTCACCCACATGCCTAAGACCTGCCCTGACAATCAGAGTAGGGACTACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp AATGGAATGGGTCCAGGAACCAGTCCTCCAGTTAGCGGTCGAGTCAGATATCACACTTTTGGCCCTGTTTaGGATGGCAAAGAACAGCAC +
Preference number: 4 (lower is better)
Translates to: NGMGPGTSPPVSGRVRYHTFGPV*DGKEQH
Trigger: GTGCTGTTCTTTGCCATCCCAAACAGGGCCAAAAGT...GTGATATCTGACTCGACCGCTAACTGGAGGACTGGTTCCTGGACCCATTCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp CTTGTAGTCCCTACTCTGATTGTCAGGGCAGGTCTTAGGCATGTGGGTGAAAGATGCCTGACTGACTTTTaGCCCTGTTTGGGATGGCAA +
Preference number: 4 (lower is better)
Translates to: LVVPTLIVRAGLRHVGERCLTDF*PCLGWQ
Trigger: TTGCCATCCCAAACAGGGCCAAAAGTCAGTCAGGCA...TCTTTCACCCACATGCCTAAGACCTGCCCTGACAATCAGAGTAGGGACTACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp TTCAGAACCTCATACACCATACACTCTTGTAGTCCCTACTCTGATTGTCAGGGCGCTGTTGGCAGAACCTaGCTTGAGTTGCCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: FRTSYTIHSCSPYSDCQGAVGRT*LELPGE
Trigger: TTCCCCAGGCAACTCAAGCCAGGTTCTGCCAACAGC...GCCCTGACAATCAGAGTAGGGACTACAAGAGTGTATGGTGTATGAGGTTCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp GGTGGTGATGGGAGTTCAGAACCTCATACACCATACACTCTTGTAGTCCCTACTTCTAGAGGCTGTGGCTaGCATTTGCTCTGTGGACAT +
Preference number: 4 (lower is better)
Translates to: GGDGSSEPHTPYTLVVPTSRGCG*HLLCGH
Trigger: ATGTCCACAGAGCAAATGTCAGCCACAGCCTCTAGA...AGTAGGGACTACAAGAGTGTATGGTGTATGAGGTTCTGAACTCCCATCACCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp GTCCCTACTCTGATTGTCAGGGCAGGTCTTAGGCATGTGGGTGAAAGAGAAGGTTTGTCATTTTCTCCGTaGACATCGTTCCTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: VPTLIVRAGLRHVGEREGLSFSP*TSFLRL
Trigger: AAGCCTCAGGAACGATGTTCACGGAGAAAATGACAA...ACCTTCTCTTTCACCCACATGCCTAAGACCTGCCCTGACAATCAGAGTAGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp CCACCACCTGAAGGCAAACACTGCTCACATTATGTTCTAGCTATCTATGCCTGTTGGGTGCTCATTGGCTaGCTGAGCATCTTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: PPPEGKHCSHYVLAIYACWVLIG*LSIFPD
Trigger: GTCTGGAAAGATGCTCAGTCAGCCAATGAGCACCCA...ACAGGCATAGATAGCTAGAACATAATGTGAGCAGTGTTTGCCTTCAGGTGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp AACAGGGCAAGGACCCTGGAGACCCATTTTAGGTGCTATGAGTTGGGGCATATGTGTGGGCATCATTTGTaGTGTGGATGTCACTCTAGA +
Preference number: 4 (lower is better)
Translates to: NRARTLETHFRCYELGHMCGHHL*CGCHSR
Trigger: TCTAGAGTGACATCCACATCACAAATGATGCCCACA...CATATGCCCCAACTCATAGCACCTAAAATGGGTCTCCAGGGTCCTTGCCCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp CCAGGTGAAATAGAACCAGGGCTTCCTCAAGTTTGCCTGCTGACACATGGCAAGGGCAAAGAACAGCACTaGGGATGTCTATCTCAGATA +
Preference number: 4 (lower is better)
Translates to: PGEIEPGLPQVCLLTHGKGKEQH*GCLSQI
Trigger: TATCTGAGATAGACATCCTCAGTGCTGTTCTTTGCC...CTTGCCATGTGTCAGCAGGCAAACTTGAGGAAGCCCTGGTTCTATTTCACCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp AAGTCTACTGGGTTACAAGGGTGGTATAGGAGTGGGCATCGCTCTCCTTATAGGCAGAATCTGTACGTCTaGTCTGGTCTCTGTCATTGG +
Preference number: 4 (lower is better)
Translates to: KSTGLQGWYRSGHRSPYRQNLYV*SGLCHW
Trigger: CCAATGACAGAGACCAGAGCAGACGTACAGATTCTG...CCTATAAGGAGAGCGATGCCCACTCCTATACCACCCTTGTAACCCAGTAGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp CCACCACCTGAAGGCAAACACTGCTCACATTATGTTCTAGCTATCTATGCCTGTGCTGTGTCTGTCATTTaGGGCATGGACAGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: PPPEGKHCSHYVLAIYACAVSVI*GMDRAP
Trigger: TGGAGCTCTGTCCATGCCGCAAATGACAGACACAGC...ACAGGCATAGATAGCTAGAACATAATGTGAGCAGTGTTTGCCTTCAGGTGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp CCACCACCTGAAGGCAAACACTGCTCACATTATGTTCTAGCTATCTATGCCTGTGTTGGGGAATTCATCTaGATCCCTCCAGCGGTCATG +
Preference number: 4 (lower is better)
Translates to: PPPEGKHCSHYVLAIYACVGEFI*IPPAVM
Trigger: CATGACCGCTGGAGGGATGCAGATGAATTCCCCAAC...ACAGGCATAGATAGCTAGAACATAATGTGAGCAGTGTTTGCCTTCAGGTGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp ACTGGCCTCGGTGGTGATGGGAGTTCAGAACCTCATACACCATACACTCTTGTATTCGCAACACTGGTTTaGAATGTGGACGTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: TGLGGDGSSEPHTPYTLVFATLV*NVDVAP
Trigger: TGGAGCAACGTCCACATTGCAAACCAGTGTTGCGAA...TACAAGAGTGTATGGTGTATGAGGTTCTGAACTCCCATCACCACCGAGGCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp GTCCCTACTCTGATTGTCAGGGCAGGTCTTAGGCATGTGGGTGAAAGAGAAGGTTCTCCTACCTCCATTTaGAAGATGAACCACCTCTCT +
Preference number: 4 (lower is better)
Translates to: VPTLIVRAGLRHVGEREGSPTSI*KMNHLS
Trigger: AGAGAGGTGGTTCATCTTGCAAATGGAGGTAGGAGA...ACCTTCTCTTTCACCCACATGCCTAAGACCTGCCCTGACAATCAGAGTAGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp ATGGAATGGGTCCAGGAACCAGTCCTCCAGTTAGCGGTCGAGTCAGATATCACATCTCCTACCTCCATTTaGAAGATGAACCACCTCTCT +
Preference number: 4 (lower is better)
Translates to: MEWVQEPVLQLAVESDITSPTSI*KMNHLS
Trigger: AGAGAGGTGGTTCATCTTGCAAATGGAGGTAGGAGA...TGTGATATCTGACTCGACCGCTAACTGGAGGACTGGTTCCTGGACCCATTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp CCACCACCTGAAGGCAAACACTGCTCACATTATGTTCTAGCTATCTATGCCTGTTGGGTGCTTGTTGGCTaGGGTGATGTACCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: PPPEGKHCSHYVLAIYACWVLVG*GDVPPE
Trigger: TTCTGGAGGTACATCACCCCAGCCAACAAGCACCCA...ACAGGCATAGATAGCTAGAACATAATGTGAGCAGTGTTTGCCTTCAGGTGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp ATGGAATGGGTCCAGGAACCAGTCCTCCAGTTAGCGGTCGAGTCAGATATCACACTGGCTTTGGTAATGTaGACATTTCTCCAGCATCTG +
Preference number: 4 (lower is better)
Translates to: MEWVQEPVLQLAVESDITLALVM*TFLQHL
Trigger: CAGATGCTGGAGAAATGTCCACATTACCAAAGCCAG...TGTGATATCTGACTCGACCGCTAACTGGAGGACTGGTTCCTGGACCCATTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp CCCCTGCCAGGTGAAATAGAACCAGGGCTTCCTCAAGTTTGCCTGCTGACACATTCTTTCCAGAGGCTGTaGCTCTCTTGTATTGTTTTG +
Preference number: 4 (lower is better)
Translates to: PLPGEIEPGLPQVCLLTHSFQRL*LSCIVL
Trigger: CAAAACAATACAAGAGAGCCACAGCCTCTGGAAAGA...ATGTGTCAGCAGGCAAACTTGAGGAAGCCCTGGTTCTATTTCACCTGGCAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp ATGGAATGGGTCCAGGAACCAGTCCTCCAGTTAGCGGTCGAGTCAGATATCACACTGTCAATTGTGGCATaGACATTGTTTCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: MEWVQEPVLQLAVESDITLSIVA*TLFQRL
Trigger: CAGCCTCTGAAACAATGTCCATGCCACAATTGACAG...TGTGATATCTGACTCGACCGCTAACTGGAGGACTGGTTCCTGGACCCATTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp GAACCCCCACTGAGGGACAAGACAAAGGCCATAAACAACAGATCAAGAGGTCAGTCAATCCTGAGGCCATaGTTCTCATTTGTGGCATGG +
Preference number: 4 (lower is better)
Translates to: EPPLRDKTKAINNRSRGQSILRP*FSFVAW
Trigger: CCATGCCACAAATGAGAACCATGGCCTCAGGATTGA...CTGACCTCTTGATCTGTTGTTTATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp GTCCCTACTCTGATTGTCAGGGCAGGTCTTAGGCATGTGGGTGAAAGAGAAGGTTCTTTCCAGACACTTTaGCTCTCATTAGTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: VPTLIVRAGLRHVGEREGSFQTL*LSLVRQ
Trigger: CTGCCTCACTAATGAGAGCCAAAGTGTCTGGAAAGA...ACCTTCTCTTTCACCCACATGCCTAAGACCTGCCCTGACAATCAGAGTAGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp GGTGGTGATGGGAGTTCAGAACCTCATACACCATACACTCTTGTAGTCCCTACTACTTCATGGGCGACATaGACATCCCTCCAGGATCTT +
Preference number: 4 (lower is better)
Translates to: GGDGSSEPHTPYTLVVPTTSWAT*TSLQDL
Trigger: AAGATCCTGGAGGGATGTCCATGTCGCCCATGAAGT...AGTAGGGACTACAAGAGTGTATGGTGTATGAGGTTCTGAACTCCCATCACCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp ACTGGCCTCGGTGGTGATGGGAGTTCAGAACCTCATACACCATACACTCTTGTACTCTCATTAACTCTGTaGACACAGTCTCACAGGCTG +
Preference number: 4 (lower is better)
Translates to: TGLGGDGSSEPHTPYTLVLSLTL*TQSHRL
Trigger: CAGCCTGTGAGACTGTGTCCACAGAGTTAATGAGAG...TACAAGAGTGTATGGTGTATGAGGTTCTGAACTCCCATCACCACCGAGGCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp GAACCCCCACTGAGGGACAAGACAAAGGCCATAAACAACAGATCAAGAGGTCAGCTGTTGTTTGTGCAGTaGACATATGTCCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: EPPLRDKTKAINNRSRGQLLFVQ*TYVQRL
Trigger: CAGCCTCTGGACATATGTCCACTGCACAAACAACAG...CTGACCTCTTGATCTGTTGTTTATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp TCTAGCTATCTATGCCTGTTTATAGACCAAGACCCTCATCAAGAGTGCTGGCCACACTGGTTTGCAATGTaGACGTTGCTCCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: SSYLCLFIDQDPHQECWPHWFAM*TLLQRP
Trigger: TGGCCTCTGGAGCAACGTCCACATTGCAAACCAGTG...TGGCCAGCACTCTTGATGAGGGTCTTGGTCTATAAACAGGCATAGATAGCTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp AACAGGGCAAGGACCCTGGAGACCCATTTTAGGTGCTATGAGTTGGGGCATATGACCTGGTCCGTAGAATaGCATCAGACCAAGACAAAT +
Preference number: 4 (lower is better)
Translates to: NRARTLETHFRCYELGHMTWSVE*HQTKTN
Trigger: ATTTGTCTTGGTCTGATGCCATTCTACGGACCAGGT...CATATGCCCCAACTCATAGCACCTAAAATGGGTCTCCAGGGTCCTTGCCCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp TCTAGCTATCTATGCCTGTTTATAGACCAAGACCCTCATCAAGAGTGCTGGCCATTCTCTTCAGCCAGCTaGCACTCGGTGTACAGAGAC +
Preference number: 4 (lower is better)
Translates to: SSYLCLFIDQDPHQECWPFSSAS*HSVYRD
Trigger: GTCTCTGTACACCGAGTGCCAGCTGGCTGAAGAGAA...TGGCCAGCACTCTTGATGAGGGTCTTGGTCTATAAACAGGCATAGATAGCTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp CCACCACCTGAAGGCAAACACTGCTCACATTATGTTCTAGCTATCTATGCCTGTACAGGGCAAGGACCCTaGAGACCCATTTTAGGTGCT +
Preference number: 4 (lower is better)
Translates to: PPPEGKHCSHYVLAIYACTGQGP*RPILGA
Trigger: AGCACCTAAAATGGGTCTCCAGGGTCCTTGCCCTGT...ACAGGCATAGATAGCTAGAACATAATGTGAGCAGTGTTTGCCTTCAGGTGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp TCTAGCTATCTATGCCTGTTTATAGACCAAGACCCTCATCAAGAGTGCTGGCCACATTACCCCATACTCTaGAGTGGACAGCAATGGGGA +
Preference number: 4 (lower is better)
Translates to: SSYLCLFIDQDPHQECWPHYPIL*SGQQWG
Trigger: TCCCCATTGCTGTCCACTTCAGAGTATGGGGTAATG...TGGCCAGCACTCTTGATGAGGGTCTTGGTCTATAAACAGGCATAGATAGCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp TTCAGAACCTCATACACCATACACTCTTGTAGTCCCTACTCTGATTGTCAGGGCCAGAGTCTGTGGCTTTaGTTTCCGGAGTGGACATCA +
Preference number: 4 (lower is better)
Translates to: FRTSYTIHSCSPYSDCQGQSLWL*FPEWTS
Trigger: TGATGTCCACTCCGGAAATCAAAGCCACAGACTCTG...GCCCTGACAATCAGAGTAGGGACTACAAGAGTGTATGGTGTATGAGGTTCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp TTCAGAACCTCATACACCATACACTCTTGTAGTCCCTACTCTGATTGTCAGGGCTCTGCTGCTCCCAGATaGAGAGATACCAGAAATGCC +
Preference number: 4 (lower is better)
Translates to: FRTSYTIHSCSPYSDCQGSAAPR*RDTRNA
Trigger: GGCATTTCTGGTATCTCTTCATCTGGGAGCAGCAGA...GCCCTGACAATCAGAGTAGGGACTACAAGAGTGTATGGTGTATGAGGTTCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp CCAGAGGTCAGAGCTAGAGAACCCCCACTGAGGGACAAGACAAAGGCCATAAACAGATTTATTTTCATGTaGGAGAGGTTCTCCTACCTC +
Preference number: 4 (lower is better)
Translates to: PEVRAREPPLRDKTKAINRFIFM*ERFSYL
Trigger: GAGGTAGGAGAACCTCTCTCACATGAAAATAAATCT...GTTTATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAGCTCTGACCTCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp TTCAGAACCTCATACACCATACACTCTTGTAGTCCCTACTCTGATTGTCAGGGCGTCAAATCAGCCAAGTaGGAGGTAAGGTGGGATGTG +
Preference number: 4 (lower is better)
Translates to: FRTSYTIHSCSPYSDCQGVKSAK*EVRWDV
Trigger: CACATCCCACCTTACCTCTCACTTGGCTGATTTGAC...GCCCTGACAATCAGAGTAGGGACTACAAGAGTGTATGGTGTATGAGGTTCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp TTCAGAACCTCATACACCATACACTCTTGTAGTCCCTACTCTGATTGTCAGGGCTTGCTTCAGAGTCCGTaGCTGACATTAGCAGCGAAG +
Preference number: 4 (lower is better)
Translates to: FRTSYTIHSCSPYSDCQGLLQSP*LTLAAK
Trigger: CTTCGCTGCTAATGTCAGGCACGGACTCTGAAGCAA...GCCCTGACAATCAGAGTAGGGACTACAAGAGTGTATGGTGTATGAGGTTCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp TTCAGAACCTCATACACCATACACTCTTGTAGTCCCTACTCTGATTGTCAGGGCTGTTTCAGAGGCTGTTaGCGTAACTGGTTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: FRTSYTIHSCSPYSDCQGCFRGC*RNWLGG
Trigger: TCCACCCAACCAGTTACGGCAACAGCCTCTGAAACA...GCCCTGACAATCAGAGTAGGGACTACAAGAGTGTATGGTGTATGAGGTTCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp CCACCACCTGAAGGCAAACACTGCTCACATTATGTTCTAGCTATCTATGCCTGTGTTGTGGCAGTCATGTaGGATGTGGGCTTTGATCCA +
Preference number: 4 (lower is better)
Translates to: PPPEGKHCSHYVLAIYACVVAVM*DVGFDP
Trigger: TGGATCAAAGCCCACATCGCACATGACTGCCACAAC...ACAGGCATAGATAGCTAGAACATAATGTGAGCAGTGTTTGCCTTCAGGTGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp GGTGGTGATGGGAGTTCAGAACCTCATACACCATACACTCTTGTAGTCCCTACTTCTGTACGTCTGCTCTaGTCTCTGTCATTGGTCTAC +
Preference number: 4 (lower is better)
Translates to: GGDGSSEPHTPYTLVVPTSVRLL*SLSLVY
Trigger: GTAGACCAATGACAGAGACCAGAGCAGACGTACAGA...AGTAGGGACTACAAGAGTGTATGGTGTATGAGGTTCTGAACTCCCATCACCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp CCAGGTGAAATAGAACCAGGGCTTCCTCAAGTTTGCCTGCTGACACATGGCAAGCATGGTGTCAAAGACTaGAGATGTCATCAACTGTGT +
Preference number: 4 (lower is better)
Translates to: PGEIEPGLPQVCLLTHGKHGVKD*RCHQLC
Trigger: ACACAGTTGATGACATCTCCAGTCTTTGACACCATG...CTTGCCATGTGTCAGCAGGCAAACTTGAGGAAGCCCTGGTTCTATTTCACCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp TCTAGCTATCTATGCCTGTTTATAGACCAAGACCCTCATCAAGAGTGCTGGCCACCCCATACTCTGAAGTaGACAGCAATGGGGACAATG +
Preference number: 4 (lower is better)
Translates to: SSYLCLFIDQDPHQECWPPHTLK*TAMGTM
Trigger: CATTGTCCCCATTGCTGTCCACTTCAGAGTATGGGG...TGGCCAGCACTCTTGATGAGGGTCTTGGTCTATAAACAGGCATAGATAGCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp GAACCCCCACTGAGGGACAAGACAAAGGCCATAAACAACAGATCAAGAGGTCAGCTGGCTTTGGTAATGTaGACATTTCTCCAGCATCTG +
Preference number: 4 (lower is better)
Translates to: EPPLRDKTKAINNRSRGQLALVM*TFLQHL
Trigger: CAGATGCTGGAGAAATGTCCACATTACCAAAGCCAG...CTGACCTCTTGATCTGTTGTTTATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp CCACCACCTGAAGGCAAACACTGCTCACATTATGTTCTAGCTATCTATGCCTGTGTTGCCGTAACTGGTTaGGTGGACATTGCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: PPPEGKHCSHYVLAIYACVAVTG*VDIAPE
Trigger: TTCTGGAGCAATGTCCACCCAACCAGTTACGGCAAC...ACAGGCATAGATAGCTAGAACATAATGTGAGCAGTGTTTGCCTTCAGGTGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp ATGGAATGGGTCCAGGAACCAGTCCTCCAGTTAGCGGTCGAGTCAGATATCACACTCTCATTAACAGCGTaGATGTTGATCCAGAGGTTT +
Preference number: 4 (lower is better)
Translates to: MEWVQEPVLQLAVESDITLSLTA*MLIQRF
Trigger: AAACCTCTGGATCAACATCCACGCTGTTAATGAGAG...TGTGATATCTGACTCGACCGCTAACTGGAGGACTGGTTCCTGGACCCATTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp TCTAGCTATCTATGCCTGTTTATAGACCAAGACCCTCATCAAGAGTGCTGGCCATCGTTCCTGAGGCTTTaGGTGTCATTAGTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: SSYLCLFIDQDPHQECWPSFLRL*VSLVAW
Trigger: CCAAGCCACTAATGACACCCAAAGCCTCAGGAACGA...TGGCCAGCACTCTTGATGAGGGTCTTGGTCTATAAACAGGCATAGATAGCTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp TTCAGAACCTCATACACCATACACTCTTGTAGTCCCTACTCTGATTGTCAGGGCCTGTCATTTGCGGCATaGACAGAGCTCCAGAAACTG +
Preference number: 4 (lower is better)
Translates to: FRTSYTIHSCSPYSDCQGLSFAA*TELQKL
Trigger: CAGTTTCTGGAGCTCTGTCCATGCCGCAAATGACAG...GCCCTGACAATCAGAGTAGGGACTACAAGAGTGTATGGTGTATGAGGTTCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp GGTGGTGATGGGAGTTCAGAACCTCATACACCATACACTCTTGTAGTCCCTACTCTCTCACTGTTGGTGTaGACATCACATCAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: GGDGSSEPHTPYTLVVPTLSLLV*TSHQRL
Trigger: CAACCTCTGATGTGATGTCCACACCAACAGTGAGAG...AGTAGGGACTACAAGAGTGTATGGTGTATGAGGTTCTGAACTCCCATCACCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp AAGACAAAGGCCATAAACAACAGATCAAGAGGTCAGAAGCTGACAACACAAGAACATGGCTCCATAAGCTaGGGATCTCAGAGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: KTKAINNRSRGQKLTTQEHGSIS*GSQRRG
Trigger: GCCACGCCTCTGAGATCCCCAGCTTATGGAGCCATG...TTCTTGTGTTGTCAGCTTCTGACCTCTTGATCTGTTGTTTATGGCCTTTGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp TTCAGAACCTCATACACCATACACTCTTGTAGTCCCTACTCTGATTGTCAGGGCGGATGGCACTTCCTTTaGTGGTGGTTTCGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: FRTSYTIHSCSPYSDCQGGWHFL*WWFRSF
Trigger: GAAACTGCGAAACCACCACCAAAGGAAGTGCCATCC...GCCCTGACAATCAGAGTAGGGACTACAAGAGTGTATGGTGTATGAGGTTCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp GGTGGTGATGGGAGTTCAGAACCTCATACACCATACACTCTTGTAGTCCCTACTATGAGTTGGGGCATATaGGGCAAGTCTACTGGGTTA +
Preference number: 4 (lower is better)
Translates to: GGDGSSEPHTPYTLVVPTMSWGI*GKSTGL
Trigger: TAACCCAGTAGACTTGCCCCATATGCCCCAACTCAT...AGTAGGGACTACAAGAGTGTATGGTGTATGAGGTTCTGAACTCCCATCACCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp ATGGAATGGGTCCAGGAACCAGTCCTCCAGTTAGCGGTCGAGTCAGATATCACAAGATTTATTTTCATGTaGGAGAGGTTCTCCTACCTC +
Preference number: 4 (lower is better)
Translates to: MEWVQEPVLQLAVESDITRFIFM*ERFSYL
Trigger: GAGGTAGGAGAACCTCTCTCACATGAAAATAAATCT...TGTGATATCTGACTCGACCGCTAACTGGAGGACTGGTTCCTGGACCCATTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp AGTTTAGCCCAATGCCTGTCACATGATACATTATCAATAACTGGTAGCCATTATGGCTCCCCTGCCAGGTaGAATAGAACCAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SLAQCLSHDTLSITGSHYGSPAR*NRTRAS
Trigger: GGAAGCCCTGGTTCTATTTCACCTGGCAGGGGAGCC...ATAATGGCTACCAGTTATTGATAATGTATCATGTGACAGGCATTGGGCTAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp CCACCACCTGAAGGCAAACACTGCTCACATTATGTTCTAGCTATCTATGCCTGTCTACAGAAGGCCATCTaGTTGTTTTGGGGCTCAACA +
Preference number: 4 (lower is better)
Translates to: PPPEGKHCSHYVLAIYACLQKAI*LFWGST
Trigger: TGTTGAGCCCCAAAACAAGCAGATGGCCTTCTGTAG...ACAGGCATAGATAGCTAGAACATAATGTGAGCAGTGTTTGCCTTCAGGTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp GGTGGTGATGGGAGTTCAGAACCTCATACACCATACACTCTTGTAGTCCCTACTCATGGCTGTTGTTTGTaGAGTGGACATATGTCCAGA +
Preference number: 4 (lower is better)
Translates to: GGDGSSEPHTPYTLVVPTHGCCL*SGHMSR
Trigger: TCTGGACATATGTCCACTGCACAAACAACAGCCATG...AGTAGGGACTACAAGAGTGTATGGTGTATGAGGTTCTGAACTCCCATCACCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp TCTAGCTATCTATGCCTGTTTATAGACCAAGACCCTCATCAAGAGTGCTGGCCATTCGCAACACTGGTTTaGAATGTGGACGTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SSYLCLFIDQDPHQECWPFATLV*NVDVAP
Trigger: TGGAGCAACGTCCACATTGCAAACCAGTGTTGCGAA...TGGCCAGCACTCTTGATGAGGGTCTTGGTCTATAAACAGGCATAGATAGCTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp CCACCACCTGAAGGCAAACACTGCTCACATTATGTTCTAGCTATCTATGCCTGTTCTGATGATGGCCTGTaGTCTGTCCAAGGTGATCAT +
Preference number: 4 (lower is better)
Translates to: PPPEGKHCSHYVLAIYACSDDGL*SVQGDH
Trigger: ATGATCACCTTGGACAGAGCACAGGCCATCATCAGA...ACAGGCATAGATAGCTAGAACATAATGTGAGCAGTGTTTGCCTTCAGGTGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp CCAGAGGTCAGAGCTAGAGAACCCCCACTGAGGGACAAGACAAAGGCCATAAACAAGAGTTTAGCCCAATaGCTGTCACATGATACATTA +
Preference number: 4 (lower is better)
Translates to: PEVRAREPPLRDKTKAINKSLAQ*LSHDTL
Trigger: TAATGTATCATGTGACAGGCATTGGGCTAAACTCTT...GTTTATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAGCTCTGACCTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp CCAGAGGTCAGAGCTAGAGAACCCCCACTGAGGGACAAGACAAAGGCCATAAACTGTTCTAGCTATCTATaGCTGTTTATAGACCAAGAC +
Preference number: 4 (lower is better)
Translates to: PEVRAREPPLRDKTKAINCSSYL*LFIDQD
Trigger: GTCTTGGTCTATAAACAGGCATAGATAGCTAGAACA...GTTTATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAGCTCTGACCTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp AAGACAAAGGCCATAAACAACAGATCAAGAGGTCAGAAGCTGACAACACAAGAACACCACTCCAGAGGATaGAGCTGGCATTGCCAATGG +
Preference number: 4 (lower is better)
Translates to: KTKAINNRSRGQKLTTQEHHSRG*SWHCQW
Trigger: CCATTGGCAATGCCAGCTCCATCCTCTGGAGTGGTG...TTCTTGTGTTGTCAGCTTCTGACCTCTTGATCTGTTGTTTATGGCCTTTGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp GAACCCCCACTGAGGGACAAGACAAAGGCCATAAACAACAGATCAAGAGGTCAGATCTGTAATTTGCAATaGGGACATTGCCTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: EPPLRDKTKAINNRSRGQICNLQ*GHCLRA
Trigger: AGCTCTGAGGCAATGTCCCCATTGCAAATTACAGAT...CTGACCTCTTGATCTGTTGTTTATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp CTTGTAGTCCCTACTCTGATTGTCAGGGCAGGTCTTAGGCATGTGGGTGAAAGATCTTTCCAGAGGCTGTaGCTCTCTTGTATTGTTTTG +
Preference number: 4 (lower is better)
Translates to: LVVPTLIVRAGLRHVGERSFQRL*LSCIVL
Trigger: CAAAACAATACAAGAGAGCCACAGCCTCTGGAAAGA...TCTTTCACCCACATGCCTAAGACCTGCCCTGACAATCAGAGTAGGGACTACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp TTCAGAACCTCATACACCATACACTCTTGTAGTCCCTACTCTGATTGTCAGGGCATCTTGGGTGCTCATTaGCTGACTGAGCATCTTTCC +
Preference number: 4 (lower is better)
Translates to: FRTSYTIHSCSPYSDCQGILGAH*LTEHLS
Trigger: GGAAAGATGCTCAGTCAGCCAATGAGCACCCAAGAT...GCCCTGACAATCAGAGTAGGGACTACAAGAGTGTATGGTGTATGAGGTTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp TTCAGAACCTCATACACCATACACTCTTGTAGTCCCTACTCTGATTGTCAGGGCCATCACATCAGAGGTTaGGGAATTCATCTGCATCCC +
Preference number: 4 (lower is better)
Translates to: FRTSYTIHSCSPYSDCQGHHIRG*GIHLHP
Trigger: GGGATGCAGATGAATTCCCCAACCTCTGATGTGATG...GCCCTGACAATCAGAGTAGGGACTACAAGAGTGTATGGTGTATGAGGTTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp GGTGGTGATGGGAGTTCAGAACCTCATACACCATACACTCTTGTAGTCCCTACTACCTGGTCCGTAGAATaGCATCAGACCAAGACAAAT +
Preference number: 4 (lower is better)
Translates to: GGDGSSEPHTPYTLVVPTTWSVE*HQTKTN
Trigger: ATTTGTCTTGGTCTGATGCCATTCTACGGACCAGGT...AGTAGGGACTACAAGAGTGTATGGTGTATGAGGTTCTGAACTCCCATCACCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp ACAGGGCAAGGACCCTGGAGACCCATTTTAGGTGCTATGAGTTGGGGCATATGGCAGGAGAAGATTCCATaGAGTTTTACTTGTTGGTAT +
Preference number: 4 (lower is better)
Translates to: TGQGPWRPILGAMSWGIWQEKIP*SFTCWY
Trigger: ATACCAACAAGTAAAACTCCATGGAATCTTCTCCTG...CCATATGCCCCAACTCATAGCACCTAAAATGGGTCTCCAGGGTCCTTGCCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp AGTTTAGCCCAATGCCTGTCACATGATACATTATCAATAACTGGTAGCCATTATAAGGTGGGATGTGCCTaGAGCGGGAGGCTGAAGGGT +
Preference number: 4 (lower is better)
Translates to: SLAQCLSHDTLSITGSHYKVGCA*SGRLKG
Trigger: ACCCTTCAGCCTCCCGCTCCAGGCACATCCCACCTT...ATAATGGCTACCAGTTATTGATAATGTATCATGTGACAGGCATTGGGCTAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp TCTAGCTATCTATGCCTGTTTATAGACCAAGACCCTCATCAAGAGTGCTGGCCAATGAGTTGGGGCATATaGGGCAAGTCTACTGGGTTA +
Preference number: 4 (lower is better)
Translates to: SSYLCLFIDQDPHQECWPMSWGI*GKSTGL
Trigger: TAACCCAGTAGACTTGCCCCATATGCCCCAACTCAT...TGGCCAGCACTCTTGATGAGGGTCTTGGTCTATAAACAGGCATAGATAGCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp CCACCACCTGAAGGCAAACACTGCTCACATTATGTTCTAGCTATCTATGCCTGTTTAGGTGCTATGAGTTaGGGCATATGGGGCAAGTCT +
Preference number: 4 (lower is better)
Translates to: PPPEGKHCSHYVLAIYACLGAMS*GIWGKS
Trigger: AGACTTGCCCCATATGCCCCAACTCATAGCACCTAA...ACAGGCATAGATAGCTAGAACATAATGTGAGCAGTGTTTGCCTTCAGGTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp TTTGAGGTAAGATATGATTTATCCTGCCTAGACTTCTCCCTGGACCAAGAACTAGTGCGATGTGGGCTTTaGTCCAGAGGCTGTGATGTT +
Preference number: 4 (lower is better)
Translates to: FEVRYDLSCLDFSLDQELVRCGL*SRGCDV
Trigger: AACATCACAGCCTCTGGATCAAAGCCCACATCGCAC...TAGTTCTTGGTCCAGGGAGAAGTCTAGGCAGGATAAATCATATCTTACCTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp AAGACAAAGGCCATAAACAACAGATCAAGAGGTCAGAAGCTGACAACACAAGAAGTGCGATGTGGGCTTTaGTCCAGAGGCTGTGATGTT +
Preference number: 4 (lower is better)
Translates to: KTKAINNRSRGQKLTTQEVRCGL*SRGCDV
Trigger: AACATCACAGCCTCTGGATCAAAGCCCACATCGCAC...TTCTTGTGTTGTCAGCTTCTGACCTCTTGATCTGTTGTTTATGGCCTTTGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp GGTGGTGATGGGAGTTCAGAACCTCATACACCATACACTCTTGTAGTCCCTACTTCTCTTGTATTGTTTTaGCACGGCTTTCATAGAGCC +
Preference number: 4 (lower is better)
Translates to: GGDGSSEPHTPYTLVVPTSLVLF*HGFHRA
Trigger: GGCTCTATGAAAGCCGTGGCAAAACAATACAAGAGA...AGTAGGGACTACAAGAGTGTATGGTGTATGAGGTTCTGAACTCCCATCACCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp AAGACAAAGGCCATAAACAACAGATCAAGAGGTCAGAAGCTGACAACACAAGAACTCGCACTGGTAGTGTaGACATGTCTCCAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: KTKAINNRSRGQKLTTQELALVV*TCLQKL
Trigger: CAGCTTCTGGAGACATGTGCACACTACCAGTGCGAG...TTCTTGTGTTGTCAGCTTCTGACCTCTTGATCTGTTGTTTATGGCCTTTGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp TCTAGCTATCTATGCCTGTTTATAGACCAAGACCCTCATCAAGAGTGCTGGCCACATGGCTGTTGTTTGTaGAGTGGACATATGTCCAGA +
Preference number: 4 (lower is better)
Translates to: SSYLCLFIDQDPHQECWPHGCCL*SGHMSR
Trigger: TCTGGACATATGTCCACTGCACAAACAACAGCCATG...TGGCCAGCACTCTTGATGAGGGTCTTGGTCTATAAACAGGCATAGATAGCTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp AAGACAAAGGCCATAAACAACAGATCAAGAGGTCAGAAGCTGACAACACAAGAACAGCGTTTGGAAACATaGTGGTGCTCCTCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: KTKAINNRSRGQKLTTQEQRLET*WCSSVC
Trigger: GCAGACTGAGGAGCACCAGCATGTTTCCAAACGCTG...TTCTTGTGTTGTCAGCTTCTGACCTCTTGATCTGTTGTTTATGGCCTTTGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp TTCAGAACCTCATACACCATACACTCTTGTAGTCCCTACTCTGATTGTCAGGGCAATTGTCATCATCCCTaGGGACATTACCCCATACTC +
Preference number: 4 (lower is better)
Translates to: FRTSYTIHSCSPYSDCQGNCHHP*GHYPIL
Trigger: GAGTATGGGGTAATGTCCCCAGGGATGATGACAATT...GCCCTGACAATCAGAGTAGGGACTACAAGAGTGTATGGTGTATGAGGTTCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp GGTGGTGATGGGAGTTCAGAACCTCATACACCATACACTCTTGTAGTCCCTACTCTCTCATTAACAGCGTaGATGTTGATCCAGAGGTTT +
Preference number: 4 (lower is better)
Translates to: GGDGSSEPHTPYTLVVPTLSLTA*MLIQRF
Trigger: AAACCTCTGGATCAACATCCACGCTGTTAATGAGAG...AGTAGGGACTACAAGAGTGTATGGTGTATGAGGTTCTGAACTCCCATCACCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp TCTAGCTATCTATGCCTGTTTATAGACCAAGACCCTCATCAAGAGTGCTGGCCATCTTTCCAGACACTTTaGCTCTCATTAGTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SSYLCLFIDQDPHQECWPSFQTL*LSLVRQ
Trigger: CTGCCTCACTAATGAGAGCCAAAGTGTCTGGAAAGA...TGGCCAGCACTCTTGATGAGGGTCTTGGTCTATAAACAGGCATAGATAGCTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp ACTATTATTATGGGTCAAAACGAATGGTTCAGGATGGATACTATAAACAGGGCACATGGCTCCATAAGCTaGGGATCTCAGAGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: TIIMGQNEWFRMDTINRAHGSIS*GSQRRG
Trigger: GCCACGCCTCTGAGATCCCCAGCTTATGGAGCCATG...TGCCCTGTTTATAGTATCCATCCTGAACCATTCGTTTTGACCCATAATAATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp GAACCCCCACTGAGGGACAAGACAAAGGCCATAAACAACAGATCAAGAGGTCAGTGGAGTTTTACTTGTTaGTATGGGCCTTCTGATGAT +
Preference number: 4 (lower is better)
Translates to: EPPLRDKTKAINNRSRGQWSFTC*YGPSDD
Trigger: ATCATCAGAAGGCCCATACCAACAAGTAAAACTCCA...CTGACCTCTTGATCTGTTGTTTATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp TTCAGAACCTCATACACCATACACTCTTGTAGTCCCTACTCTGATTGTCAGGGCCCCTCATTGTATTGTTaGATCGCAGTGAATGTAAGG +
Preference number: 4 (lower is better)
Translates to: FRTSYTIHSCSPYSDCQGPSLYC*IAVNVR
Trigger: CCTTACATTCACTGCGATTCAACAATACAATGAGGG...GCCCTGACAATCAGAGTAGGGACTACAAGAGTGTATGGTGTATGAGGTTCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp ACTATTATTATGGGTCAAAACGAATGGTTCAGGATGGATACTATAAACAGGGCAGCTTGTTGGCTGGGGTaGTGTACCTCCAGAAGCTAC +
Preference number: 4 (lower is better)
Translates to: TIIMGQNEWFRMDTINRAACWLG*CTSRSY
Trigger: GTAGCTTCTGGAGGTACATCACCCCAGCCAACAAGC...TGCCCTGTTTATAGTATCCATCCTGAACCATTCGTTTTGACCCATAATAATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp ACTATTATTATGGGTCAAAACGAATGGTTCAGGATGGATACTATAAACAGGGCAAGGATGAAGCTCTTGTaGGCAGTGAGGGCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: TIIMGQNEWFRMDTINRARMKLL*AVRASL
Trigger: GAGAGAGGCCCTCACTGCTCACAAGAGCTTCATCCT...TGCCCTGTTTATAGTATCCATCCTGAACCATTCGTTTTGACCCATAATAATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp AAGACAAAGGCCATAAACAACAGATCAAGAGGTCAGAAGCTGACAACACAAGAACACTTGTGGCATGGATaGCATCATTCCAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: KTKAINNRSRGQKLTTQEHLWHG*HHSRGC
Trigger: ACAGCCTCTGGAATGATGTCATCCATGCCACAAGTG...TTCTTGTGTTGTCAGCTTCTGACCTCTTGATCTGTTGTTTATGGCCTTTGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp ACTATTATTATGGGTCAAAACGAATGGTTCAGGATGGATACTATAAACAGGGCATCCTCAGTCTGCTGCTaGGAGCTCAGTTCATTCCCC +
Preference number: 4 (lower is better)
Translates to: TIIMGQNEWFRMDTINRASSVCC*ELSSFP
Trigger: GGGGAATGAACTGAGCTCTCAGCAGCAGACTGAGGA...TGCCCTGTTTATAGTATCCATCCTGAACCATTCGTTTTGACCCATAATAATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp AAGTCTACTGGGTTACAAGGGTGGTATAGGAGTGGGCATCGCTCTCCTTATAGGGCTGGAACTGTCTTTTaGAATGTAGACATATTTCCA +
Preference number: 4 (lower is better)
Translates to: KSTGLQGWYRSGHRSPYRAGTVF*NVDIFP
Trigger: TGGAAATATGTCTACATTGCAAAAGACAGTTCCAGC...CCTATAAGGAGAGCGATGCCCACTCCTATACCACCCTTGTAACCCAGTAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp AAGACAAAGGCCATAAACAACAGATCAAGAGGTCAGAAGCTGACAACACAAGAATGTTTCAGAGGCTGTTaGCGTAACTGGTTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: KTKAINNRSRGQKLTTQECFRGC*RNWLGG
Trigger: TCCACCCAACCAGTTACGGCAACAGCCTCTGAAACA...TTCTTGTGTTGTCAGCTTCTGACCTCTTGATCTGTTGTTTATGGCCTTTGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp AAGACAAAGGCCATAAACAACAGATCAAGAGGTCAGAAGCTGACAACACAAGAATTGTGGCATGGACATTaGTTCAGAGACAGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: KTKAINNRSRGQKLTTQELWHGH*FRDRGS
Trigger: AGAGCCCCTGTCTCTGAAGCAATGTCCATGCCACAA...TTCTTGTGTTGTCAGCTTCTGACCTCTTGATCTGTTGTTTATGGCCTTTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp TTTGAGGTAAGATATGATTTATCCTGCCTAGACTTCTCCCTGGACCAAGAACTATTGCAATGTGGACGTTaGTCCAGAGGCCATGGTTTC +
Preference number: 4 (lower is better)
Translates to: FEVRYDLSCLDFSLDQELLQCGR*SRGHGF
Trigger: GAAACCATGGCCTCTGGAGCAACGTCCACATTGCAA...TAGTTCTTGGTCCAGGGAGAAGTCTAGGCAGGATAAATCATATCTTACCTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp AAGACAAAGGCCATAAACAACAGATCAAGAGGTCAGAAGCTGACAACACAAGAAGTTGTGGCAGTCATGTaGGATGTGGGCTTTGATCCA +
Preference number: 4 (lower is better)
Translates to: KTKAINNRSRGQKLTTQEVVAVM*DVGFDP
Trigger: TGGATCAAAGCCCACATCGCACATGACTGCCACAAC...TTCTTGTGTTGTCAGCTTCTGACCTCTTGATCTGTTGTTTATGGCCTTTGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp AAGACAAAGGCCATAAACAACAGATCAAGAGGTCAGAAGCTGACAACACAAGAAATGTCATCAACTGTGTaGATGTCCCTCCAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: KTKAINNRSRGQKLTTQEMSSTV*MSLQGL
Trigger: CAGACCCTGGAGGGACATCCACACAGTTGATGACAT...TTCTTGTGTTGTCAGCTTCTGACCTCTTGATCTGTTGTTTATGGCCTTTGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp TTCAGAACCTCATACACCATACACTCTTGTAGTCCCTACTCTGATTGTCAGGGCCATGGTGTCAAAGACTaGAGATGTCATCAACTGTGT +
Preference number: 4 (lower is better)
Translates to: FRTSYTIHSCSPYSDCQGHGVKD*RCHQLC
Trigger: ACACAGTTGATGACATCTCCAGTCTTTGACACCATG...GCCCTGACAATCAGAGTAGGGACTACAAGAGTGTATGGTGTATGAGGTTCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp ACTATTATTATGGGTCAAAACGAATGGTTCAGGATGGATACTATAAACAGGGCACTGTCATCAGTGAGGTaGTCATGGCTCCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: TIIMGQNEWFRMDTINRALSSVR*SWLQRL
Trigger: CAGCCTCTGGAGCCATGACCACCTCACTGATGACAG...TGCCCTGTTTATAGTATCCATCCTGAACCATTCGTTTTGACCCATAATAATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp TTCAGAACCTCATACACCATACACTCTTGTAGTCCCTACTCTGATTGTCAGGGCTTCTCATTTGTGGCATaGACATTGCTTCAGAGACAG +
Preference number: 4 (lower is better)
Translates to: FRTSYTIHSCSPYSDCQGFSFVA*TLLQRQ
Trigger: CTGTCTCTGAAGCAATGTCCATGCCACAAATGAGAA...GCCCTGACAATCAGAGTAGGGACTACAAGAGTGTATGGTGTATGAGGTTCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp TTTGAGGTAAGATATGATTTATCCTGCCTAGACTTCTCCCTGGACCAAGAACTACTGTCATTTGCGGCATaGACAGAGCTCCAGAAACTG +
Preference number: 4 (lower is better)
Translates to: FEVRYDLSCLDFSLDQELLSFAA*TELQKL
Trigger: CAGTTTCTGGAGCTCTGTCCATGCCGCAAATGACAG...TAGTTCTTGGTCCAGGGAGAAGTCTAGGCAGGATAAATCATATCTTACCTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp AAGACAAAGGCCATAAACAACAGATCAAGAGGTCAGAAGCTGACAACACAAGAACTCTTGGTAGTGGCATaGGCATCGATCCAGAAACTG +
Preference number: 4 (lower is better)
Translates to: KTKAINNRSRGQKLTTQELLVVA*ASIQKL
Trigger: CAGTTTCTGGATCGATGCCCATGCCACTACCAAGAG...TTCTTGTGTTGTCAGCTTCTGACCTCTTGATCTGTTGTTTATGGCCTTTGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp AAGTCTACTGGGTTACAAGGGTGGTATAGGAGTGGGCATCGCTCTCCTTATAGGATGGGTCAAAACGAATaGTTCAGGATGGATACTATA +
Preference number: 4 (lower is better)
Translates to: KSTGLQGWYRSGHRSPYRMGQNE*FRMDTI
Trigger: TATAGTATCCATCCTGAACCATTCGTTTTGACCCAT...CCTATAAGGAGAGCGATGCCCACTCCTATACCACCCTTGTAACCCAGTAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp AAGACAAAGGCCATAAACAACAGATCAAGAGGTCAGAAGCTGACAACACAAGAACAGAATCTGTACGTCTaGTCTGGTCTCTGTCATTGG +
Preference number: 4 (lower is better)
Translates to: KTKAINNRSRGQKLTTQEQNLYV*SGLCHW
Trigger: CCAATGACAGAGACCAGAGCAGACGTACAGATTCTG...TTCTTGTGTTGTCAGCTTCTGACCTCTTGATCTGTTGTTTATGGCCTTTGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp AGTTTAGCCCAATGCCTGTCACATGATACATTATCAATAACTGGTAGCCATTATCTCGCACTGGTAGTGTaGACATGTCTCCAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: SLAQCLSHDTLSITGSHYLALVV*TCLQKL
Trigger: CAGCTTCTGGAGACATGTGCACACTACCAGTGCGAG...ATAATGGCTACCAGTTATTGATAATGTATCATGTGACAGGCATTGGGCTAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp TTTGAGGTAAGATATGATTTATCCTGCCTAGACTTCTCCCTGGACCAAGAACTATCTGATGATGGCCTGTaGTCTGTCCAAGGTGATCAT +
Preference number: 4 (lower is better)
Translates to: FEVRYDLSCLDFSLDQELSDDGL*SVQGDH
Trigger: ATGATCACCTTGGACAGAGCACAGGCCATCATCAGA...TAGTTCTTGGTCCAGGGAGAAGTCTAGGCAGGATAAATCATATCTTACCTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp GGTGGTGATGGGAGTTCAGAACCTCATACACCATACACTCTTGTAGTCCCTACTTGTTCTAGCTATCTATaGCTGTTTATAGACCAAGAC +
Preference number: 4 (lower is better)
Translates to: GGDGSSEPHTPYTLVVPTCSSYL*LFIDQD
Trigger: GTCTTGGTCTATAAACAGGCATAGATAGCTAGAACA...AGTAGGGACTACAAGAGTGTATGGTGTATGAGGTTCTGAACTCCCATCACCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp TTTGAGGTAAGATATGATTTATCCTGCCTAGACTTCTCCCTGGACCAAGAACTAGGCTGTTGCTCTCACTaGCGGATTAGACATCATTTC +
Preference number: 4 (lower is better)
Translates to: FEVRYDLSCLDFSLDQELGCCSH*RIRHHF
Trigger: GAAATGATGTCTAATCCGCCAGTGAGAGCAACAGCC...TAGTTCTTGGTCCAGGGAGAAGTCTAGGCAGGATAAATCATATCTTACCTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp AAGACAAAGGCCATAAACAACAGATCAAGAGGTCAGAAGCTGACAACACAAGAACTCTCATTTGCAGCATaGACATTGATCCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: KTKAINNRSRGQKLTTQELSFAA*TLIQRL
Trigger: CAGCCTCTGGATCAATGTCCATGCTGCAAATGAGAG...TTCTTGTGTTGTCAGCTTCTGACCTCTTGATCTGTTGTTTATGGCCTTTGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp TTTGAGGTAAGATATGATTTATCCTGCCTAGACTTCTCCCTGGACCAAGAACTACACTTCCTTTGGTGGTaGTTTCGCAGTTTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: FEVRYDLSCLDFSLDQELHFLWW*FRSFRS
Trigger: ACTCCTGAAACTGCGAAACCACCACCAAAGGAAGTG...TAGTTCTTGGTCCAGGGAGAAGTCTAGGCAGGATAAATCATATCTTACCTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp AAGACAAAGGCCATAAACAACAGATCAAGAGGTCAGAAGCTGACAACACAAGAAGGTAGTAACAGCGTTTaGAAACATGCTGGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: KTKAINNRSRGQKLTTQEGSNSV*KHAGAP
Trigger: AGGAGCACCAGCATGTTTCCAAACGCTGTTACTACC...TTCTTGTGTTGTCAGCTTCTGACCTCTTGATCTGTTGTTTATGGCCTTTGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp TTTGAGGTAAGATATGATTTATCCTGCCTAGACTTCTCCCTGGACCAAGAACTATTAGGTGCTATGAGTTaGGGCATATGGGGCAAGTCT +
Preference number: 4 (lower is better)
Translates to: FEVRYDLSCLDFSLDQELLGAMS*GIWGKS
Trigger: AGACTTGCCCCATATGCCCCAACTCATAGCACCTAA...TAGTTCTTGGTCCAGGGAGAAGTCTAGGCAGGATAAATCATATCTTACCTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp AGTTTAGCCCAATGCCTGTCACATGATACATTATCAATAACTGGTAGCCATTATACAGGGCAAGGACCCTaGAGACCCATTTTAGGTGCT +
Preference number: 4 (lower is better)
Translates to: SLAQCLSHDTLSITGSHYTGQGP*RPILGA
Trigger: AGCACCTAAAATGGGTCTCCAGGGTCCTTGCCCTGT...ATAATGGCTACCAGTTATTGATAATGTATCATGTGACAGGCATTGGGCTAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp TTTGAGGTAAGATATGATTTATCCTGCCTAGACTTCTCCCTGGACCAAGAACTACATTGCCTCAGAGGATaGAGTGCTCATTATAGGTGT +
Preference number: 4 (lower is better)
Translates to: FEVRYDLSCLDFSLDQELHCLRG*SAHYRC
Trigger: ACACCTATAATGAGCACTTCATCCTCTGAGGCAATG...TAGTTCTTGGTCCAGGGAGAAGTCTAGGCAGGATAAATCATATCTTACCTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp AAGACAAAGGCCATAAACAACAGATCAAGAGGTCAGAAGCTGACAACACAAGAAATAGGGAGTCATATATaGCCTGGGATCTTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: KTKAINNRSRGQKLTTQEIGSHI*PGIFSG
Trigger: TCCTGAGAAGATCCCAGGGCATATATGACTCCCTAT...TTCTTGTGTTGTCAGCTTCTGACCTCTTGATCTGTTGTTTATGGCCTTTGTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp AAGACAAAGGCCATAAACAACAGATCAAGAGGTCAGAAGCTGACAACACAAGAAAATTGTCATCATCCCTaGGGACATTACCCCATACTC +
Preference number: 4 (lower is better)
Translates to: KTKAINNRSRGQKLTTQENCHHP*GHYPIL
Trigger: GAGTATGGGGTAATGTCCCCAGGGATGATGACAATT...TTCTTGTGTTGTCAGCTTCTGACCTCTTGATCTGTTGTTTATGGCCTTTGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp ACTATTATTATGGGTCAAAACGAATGGTTCAGGATGGATACTATAAACAGGGCATTTGTGGAGCAGACATaGCTCCATAAGCTGGGGATC +
Preference number: 4 (lower is better)
Translates to: TIIMGQNEWFRMDTINRAFVEQT*LHKLGI
Trigger: GATCCCCAGCTTATGGAGCCATGTCTGCTCCACAAA...TGCCCTGTTTATAGTATCCATCCTGAACCATTCGTTTTGACCCATAATAATAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp ACTATTATTATGGGTCAAAACGAATGGTTCAGGATGGATACTATAAACAGGGCACTGACATTAAAGGCATaGGCATTGTTCCAGAGGCCG +
Preference number: 4 (lower is better)
Translates to: TIIMGQNEWFRMDTINRALTLKA*ALFQRP
Trigger: CGGCCTCTGGAACAATGCCCATGCCTTTAATGTCAG...TGCCCTGTTTATAGTATCCATCCTGAACCATTCGTTTTGACCCATAATAATAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp AGTTTAGCCCAATGCCTGTCACATGATACATTATCAATAACTGGTAGCCATTATCTCTTGGTAGTGGCATaGGCATCGATCCAGAAACTG +
Preference number: 4 (lower is better)
Translates to: SLAQCLSHDTLSITGSHYLLVVA*ASIQKL
Trigger: CAGTTTCTGGATCGATGCCCATGCCACTACCAAGAG...ATAATGGCTACCAGTTATTGATAATGTATCATGTGACAGGCATTGGGCTAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp ACTATTATTATGGGTCAAAACGAATGGTTCAGGATGGATACTATAAACAGGGCACAGTTTCAGGAGTTGTaGCAGTCATGTGCGATGTGG +
Preference number: 4 (lower is better)
Translates to: TIIMGQNEWFRMDTINRAQFQEL*QSCAMW
Trigger: CCACATCGCACATGACTGCCACAACTCCTGAAACTG...TGCCCTGTTTATAGTATCCATCCTGAACCATTCGTTTTGACCCATAATAATAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp AGTTTAGCCCAATGCCTGTCACATGATACATTATCAATAACTGGTAGCCATTATGTCCTTCCAGAAACCTaGTCCGTAGAATGGCATCAG +
Preference number: 4 (lower is better)
Translates to: SLAQCLSHDTLSITGSHYVLPET*SVEWHQ
Trigger: CTGATGCCATTCTACGGACCAGGTTTCTGGAAGGAC...ATAATGGCTACCAGTTATTGATAATGTATCATGTGACAGGCATTGGGCTAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp TTCAGAACCTCATACACCATACACTCTTGTAGTCCCTACTCTGATTGTCAGGGCCAGGAGAAGATTCCATaGAGTTTTACTTGTTGGTAT +
Preference number: 4 (lower is better)
Translates to: FRTSYTIHSCSPYSDCQGQEKIP*SFTCWY
Trigger: ATACCAACAAGTAAAACTCCATGGAATCTTCTCCTG...GCCCTGACAATCAGAGTAGGGACTACAAGAGTGTATGGTGTATGAGGTTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp TTTGAGGTAAGATATGATTTATCCTGCCTAGACTTCTCCCTGGACCAAGAACTATCTCTTGTATTGTTTTaGCACGGCTTTCATAGAGCC +
Preference number: 4 (lower is better)
Translates to: FEVRYDLSCLDFSLDQELSLVLF*HGFHRA
Trigger: GGCTCTATGAAAGCCGTGGCAAAACAATACAAGAGA...TAGTTCTTGGTCCAGGGAGAAGTCTAGGCAGGATAAATCATATCTTACCTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp TTTGAGGTAAGATATGATTTATCCTGCCTAGACTTCTCCCTGGACCAAGAACTAATCTGTAATTTGCAATaGGGACATTGCCTCAGAGCT +
Preference number: 4 (lower is better)
Translates to: FEVRYDLSCLDFSLDQELICNLQ*GHCLRA
Trigger: AGCTCTGAGGCAATGTCCCCATTGCAAATTACAGAT...TAGTTCTTGGTCCAGGGAGAAGTCTAGGCAGGATAAATCATATCTTACCTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp AGTTTAGCCCAATGCCTGTCACATGATACATTATCAATAACTGGTAGCCATTATCATCACATCAGAGGTTaGGGAATTCATCTGCATCCC +
Preference number: 4 (lower is better)
Translates to: SLAQCLSHDTLSITGSHYHHIRG*GIHLHP
Trigger: GGGATGCAGATGAATTCCCCAACCTCTGATGTGATG...ATAATGGCTACCAGTTATTGATAATGTATCATGTGACAGGCATTGGGCTAAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp ACTATTATTATGGGTCAAAACGAATGGTTCAGGATGGATACTATAAACAGGGCAGGTAGTAACAGCGTTTaGAAACATGCTGGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: TIIMGQNEWFRMDTINRAGSNSV*KHAGAP
Trigger: AGGAGCACCAGCATGTTTCCAAACGCTGTTACTACC...TGCCCTGTTTATAGTATCCATCCTGAACCATTCGTTTTGACCCATAATAATAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp ACTATTATTATGGGTCAAAACGAATGGTTCAGGATGGATACTATAAACAGGGCATGTGGGCATCATTTGTaGTGTGGATGTCACTCTAGA +
Preference number: 4 (lower is better)
Translates to: TIIMGQNEWFRMDTINRACGHHL*CGCHSR
Trigger: TCTAGAGTGACATCCACATCACAAATGATGCCCACA...TGCCCTGTTTATAGTATCCATCCTGAACCATTCGTTTTGACCCATAATAATAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp ACTATTATTATGGGTCAAAACGAATGGTTCAGGATGGATACTATAAACAGGGCAGAGACCCATTTTAGGTaGTATGAGTTGGGGCATATG +
Preference number: 4 (lower is better)
Translates to: TIIMGQNEWFRMDTINRAETHFR*YELGHM
Trigger: CATATGCCCCAACTCATAGCACCTAAAATGGGTCTC...TGCCCTGTTTATAGTATCCATCCTGAACCATTCGTTTTGACCCATAATAATAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp ACTATTATTATGGGTCAAAACGAATGGTTCAGGATGGATACTATAAACAGGGCATGTAGTTTAATGGAATaGGTCCAGGAACCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: TIIMGQNEWFRMDTINRACSLME*VQEPVL
Trigger: GAGGACTGGTTCCTGGACCCATTCCATTAAACTACA...TGCCCTGTTTATAGTATCCATCCTGAACCATTCGTTTTGACCCATAATAATAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR TCA 90 bp AGTTTAGCCCAATGCCTGTCACATGATACATTATCAATAACTGGTAGCCATTATAAATGCCATTCTCTCTaGATCGTCCAAAAACCCCTT +
Preference number: 4 (lower is better)
Translates to: SLAQCLSHDTLSITGSHYKCHSL*IVQKPL
Trigger: AAGGGGTTTTTGGACGATTCAGAGAGAATGGCATTT...ATAATGGCTACCAGTTATTGATAATGTATCATGTGACAGGCATTGGGCTAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp AGTTTAGCCCAATGCCTGTCACATGATACATTATCAATAACTGGTAGCCATTATAGATATGATTTATCCTaGCTAGACTTCTCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: SLAQCLSHDTLSITGSHYRYDLS*LDFSLD
Trigger: GTCCAGGGAGAAGTCTAGGCAGGATAAATCATATCT...ATAATGGCTACCAGTTATTGATAATGTATCATGTGACAGGCATTGGGCTAAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp AGTTTAGCCCAATGCCTGTCACATGATACATTATCAATAACTGGTAGCCATTATCAGTCATTAGCACTTTaGACATTGCTTCGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: SLAQCLSHDTLSITGSHYQSLAL*TLLRCL
Trigger: AAGACACCGAAGCAATGTCCAAAGTGCTAATGACTG...ATAATGGCTACCAGTTATTGATAATGTATCATGTGACAGGCATTGGGCTAAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp AGTTTAGCCCAATGCCTGTCACATGATACATTATCAATAACTGGTAGCCATTATTTCTCATTTGTGGCATaGACATTGCTTCAGAGACAG +
Preference number: 4 (lower is better)
Translates to: SLAQCLSHDTLSITGSHYFSFVA*TLLQRQ
Trigger: CTGTCTCTGAAGCAATGTCCATGCCACAAATGAGAA...ATAATGGCTACCAGTTATTGATAATGTATCATGTGACAGGCATTGGGCTAAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CCA 90 bp ACTATTATTATGGGTCAAAACGAATGGTTCAGGATGGATACTATAAACAGGGCATGGAGTTTTACTTGTTaGTATGGGCCTTCTGATGAT +
Preference number: 4 (lower is better)
Translates to: TIIMGQNEWFRMDTINRAWSFTC*YGPSDD
Trigger: ATCATCAGAAGGCCCATACCAACAAGTAAAACTCCA...TGCCCTGTTTATAGTATCCATCCTGAACCATTCGTTTTGACCCATAATAATAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR GCA 90 bp AGTTTAGCCCAATGCCTGTCACATGATACATTATCAATAACTGGTAGCCATTATGCTGGAACTGTCTTTTaGAATGTAGACATATTTCCA +
Preference number: 4 (lower is better)
Translates to: SLAQCLSHDTLSITGSHYAGTVF*NVDIFP
Trigger: TGGAAATATGTCTACATTGCAAAAGACAGTTCCAGC...ATAATGGCTACCAGTTATTGATAATGTATCATGTGACAGGCATTGGGCTAAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CCA 90 bp CAGCCACAGGATAGTGTGGAGGGAGCCCAGGAGGCAAGAAAATCTTaGCTCTCACCGCTGAGAGGGAGCGAAGCTGGGCTTGTCACTCGG +
Preference number: 5 (lower is better)
Translates to: QPQDSVEGAQEARKS*LSPLRGSEAGLVTR
Trigger: CCGAGTGACAAGCCCAGCTTCGCTCCCTCTCAGCGGTGAGAGCCAAGATTTTCTTGCCTCCTGGGCTCCCTCCACACTATCCTGTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000520821.5
CDS TCA 90 bp GGCCTCCTCATTATTCCGCTTACAGGCTGTTGGCAGAACCTGGCTTaGGTTGCCTGGGGAATCCTTCTCTTCAGCCAGCTGGCACTCGGT +
Preference number: 5 (lower is better)
Translates to: GLLIIPLTGCWQNLA*VAWGILLFSQLALG
Trigger: ACCGAGTGCCAGCTGGCTGAAGAGAAGGATTCCCCAGGCAACTCAAGCCAGGTTCTGCCAACAGCCTGTAAGCGGAATAATGAGGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CCA 90 bp CCCATGGCCTCCTCATTATTCCGCTTACAGGCTGTTGGCAGAACCTaGCTTGAGTTGCCTGGGGAATCCTTCTCTTCAGCCAGCTGGCAC +
Preference number: 5 (lower is better)
Translates to: PMASSLFRLQAVGRT*LELPGESFSSASWH
Trigger: GTGCCAGCTGGCTGAAGAGAAGGATTCCCCAGGCAACTCAAGCCAGGTTCTGCCAACAGCCTGTAAGCGGAATAATGAGGAGGCCATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp AGAGGTAAGGTGGGATGTGCCTGGAGCGGGAGGCTGAAGGGTGAAGGCAACAAGTCCAGGCTCTCACTGTaGGTGTGGACATCACATCAG +
Preference number: 5 (lower is better)
Translates to: RGKVGCAWSGRLKGEGNKSRLSL*VWTSHQ
Trigger: CTGATGTGATGTCCACACCAACAGTGAGAGCCTGGA...CTTGTTGCCTTCACCCTTCAGCCTCCCGCTCCAGGCACATCCCACCTTACCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CCA 90 bp AGGTTGGGGAATTCATCTGCATCCCTCCAGCGGTCATGGACTTCATaGGCGACATGGACATCCCTCCAGGATCTTGGGTGCTCATTGGCT +
Preference number: 5 (lower is better)
Translates to: RLGNSSASLQRSWTS*ATWTSLQDLGCSLA
Trigger: AGCCAATGAGCACCCAAGATCCTGGAGGGATGTCCATGTCGCCCATGAAGTCCATGACCGCTGGAGGGATGCAGATGAATTCCCCAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CCA 90 bp TCACATCAGAGGTTGGGGAATTCATCTGCATCCCTCCAGCGGTCATaGACTTCATGGGCGACATGGACATCCCTCCAGGATCTTGGGTGC +
Preference number: 5 (lower is better)
Translates to: SHQRLGNSSASLQRS*TSWATWTSLQDLGC
Trigger: GCACCCAAGATCCTGGAGGGATGTCCATGTCGCCCATGAAGTCCATGACCGCTGGAGGGATGCAGATGAATTCCCCAACCTCTGATGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CCA 90 bp GTCTTCAAGTCTCTGAAGGGCAGGCAATACTCCAGTCCTCATGGCTaGCACTTTCTCCTGGGACCTGGAGCAGGGCTCACGAAAGTTCTG +
Preference number: 5 (lower is better)
Translates to: VFKSLKGRQYSSPHG*HFLLGPGAGLTKVL
Trigger: CAGAACTTTCGTGAGCCCTGCTCCAGGTCCCAGGAGAAAGTGCCAGCCATGAGGACTGGAGTATTGCCTGCCCTTCAGAGACTTGAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520821.5
CDS-3UTR CAA 90 bp AATGGAATGGGTCCAGGAACCAGTCCTCCAGTTAGCGGTCGAGTCAGATATCACTGGGGCTGGCATCGTTaGGGTGGGCATCACTCCAGA +
Preference number: 5 (lower is better)
Translates to: NGMGPGTSPPVSGRVRYHWGWHR*GGHHSR
Trigger: TCTGGAGTGATGCCCACCCAAACGATGCCAGCCCCA...GTGATATCTGACTCGACCGCTAACTGGAGGACTGGTTCCTGGACCCATTCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp AGAGGTAAGGTGGGATGTGCCTGGAGCGGGAGGCTGAAGGGTGAAGGCAACAAGAGTCTACATTTTGTGTaGACCATGGGGACATCGCCC +
Preference number: 5 (lower is better)
Translates to: RGKVGCAWSGRLKGEGNKSLHFV*TMGTSP
Trigger: GGGCGATGTCCCCATGGTCAACACAAAATGTAGACT...CTTGTTGCCTTCACCCTTCAGCCTCCCGCTCCAGGCACATCCCACCTTACCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp CACCCAGAGGTCAGAGCTAGAGAACCCCCACTGAGGGACAAGACAAAGGCCATACATCCCTCCAGGATCTaGGGTGCTCATTGGCTGACT +
Preference number: 5 (lower is better)
Translates to: HPEVRAREPPLRDKTKAIHPSRI*GAHWLT
Trigger: AGTCAGCCAATGAGCACCCAAGATCCTGGAGGGATG...TATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAGCTCTGACCTCTGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp CCAGAGGTCAGAGCTAGAGAACCCCCACTGAGGGACAAGACAAAGGCCATAAACTTAAAGGCATGGGCATaGTTCCAGAGGCCGGGGCTC +
Preference number: 5 (lower is better)
Translates to: PEVRAREPPLRDKTKAINLKAWA*FQRPGL
Trigger: GAGCCCCGGCCTCTGGAACAATGCCCATGCCTTTAA...GTTTATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAGCTCTGACCTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp CACCCAGAGGTCAGAGCTAGAGAACCCCCACTGAGGGACAAGACAAAGGCCATATCCGCTTACAGGCTGTaGGCAGAACCTGGCTTGAGT +
Preference number: 5 (lower is better)
Translates to: HPEVRAREPPLRDKTKAISAYRL*AEPGLS
Trigger: ACTCAAGCCAGGTTCTGCCAACAGCCTGTAAGCGGA...TATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAGCTCTGACCTCTGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CCA 90 bp AGAGGTCCAGGCTCTCACTGTTGGTGTGGACATCACATCAGAGGTTaGGGAATTCATCTGCATCCCTCCAGCGGTCATGGACTTCATGGG +
Preference number: 5 (lower is better)
Translates to: RGPGSHCWCGHHIRG*GIHLHPSSGHGLHG
Trigger: CCCATGAAGTCCATGACCGCTGGAGGGATGCAGATGAATTCCCCAACCTCTGATGTGATGTCCACACCAACAGTGAGAGCCTGGACCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CCA 90 bp GAGTGCTGGGGTCAACATTCCGAAGGATGGCACTTCCTTTGGTGGTaGTTTCGCAGTTTCAGGAGTTGTGGCAGTCATGTGCGATGTGGG +
Preference number: 5 (lower is better)
Translates to: ECWGQHSEGWHFLWW*FRSFRSCGSHVRCG
Trigger: CCCACATCGCACATGACTGCCACAACTCCTGAAACTGCGAAACCACCACCAAAGGAAGTGCCATCCTTCGGAATGTTGACCCCAGCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CCA 90 bp AGAACCTGGCTTGAGTTGCCTGGGGAATCCTTCTCTTCAGCCAGCTaGCACTCGGTGTACAGAGACCTGTCTATCAGCTCCTTTAGGCTG +
Preference number: 5 (lower is better)
Translates to: RTWLELPGESFSSAS*HSVYRDLSISSFRL
Trigger: CAGCCTAAAGGAGCTGATAGACAGGTCTCTGTACACCGAGTGCCAGCTGGCTGAAGAGAAGGATTCCCCAGGCAACTCAAGCCAGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp CCAGAGGTCAGAGCTAGAGAACCCCCACTGAGGGACAAGACAAAGGCCATAAACTTTGCAATGGGGACATaGCCTCAGAGCTGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: PEVRAREPPLRDKTKAINFAMGT*PQSWEL
Trigger: CAGCTCCCAGCTCTGAGGCAATGTCCCCATTGCAAA...GTTTATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAGCTCTGACCTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp TTACAAGGGTGGTATAGGAGTGGGCATCGCTCTCCTTATAGGCTCCCCTGCCAGAGTTTTGGGTGCTTGTaGGCTGGGGTGATGTACCTC +
Preference number: 5 (lower is better)
Translates to: LQGWYRSGHRSPYRLPCQSFGCL*AGVMYL
Trigger: GAGGTACATCACCCCAGCCAACAAGCACCCAAAACT...CTGGCAGGGGAGCCTATAAGGAGAGCGATGCCCACTCCTATACCACCCTTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp TTACAAGGGTGGTATAGGAGTGGGCATCGCTCTCCTTATAGGCTCCCCTGCCAGCAGAGTTTTGGGTGCTaGTTGGCTGGGGTGATGTAC +
Preference number: 5 (lower is better)
Translates to: LQGWYRSGHRSPYRLPCQQSFGC*LAGVMY
Trigger: GTACATCACCCCAGCCAACAAGCACCCAAAACTCTG...CTGGCAGGGGAGCCTATAAGGAGAGCGATGCCCACTCCTATACCACCCTTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp GAACCCCCACTGAGGGACAAGACAAAGGCCATAAACAACAGATCAAGAGGTCAGTGGGGCTGGCATCGTTaGGGTGGGCATCACTCCAGA +
Preference number: 5 (lower is better)
Translates to: EPPLRDKTKAINNRSRGQWGWHR*GGHHSR
Trigger: TCTGGAGTGATGCCCACCCAAACGATGCCAGCCCCA...CTGACCTCTTGATCTGTTGTTTATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp CACCCAGAGGTCAGAGCTAGAGAACCCCCACTGAGGGACAAGACAAAGGCCATAGAGGCTGTGGCTCTCTaGTATTGTTTTGCCACGGCT +
Preference number: 5 (lower is better)
Translates to: HPEVRAREPPLRDKTKAIEAVAL*YCFATA
Trigger: AGCCGTGGCAAAACAATACAAGAGAGCCACAGCCTC...TATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAGCTCTGACCTCTGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp CCCCTGCCAGGTGAAATAGAACCAGGGCTTCCTCAAGTTTGCCTGCTGACACATCTGGTTGGGTGGACATaGCTCCAGAAGTTGGAGCTC +
Preference number: 5 (lower is better)
Translates to: PLPGEIEPGLPQVCLLTHLVGWT*LQKLEL
Trigger: GAGCTCCAACTTCTGGAGCAATGTCCACCCAACCAG...ATGTGTCAGCAGGCAAACTTGAGGAAGCCCTGGTTCTATTTCACCTGGCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp TTACAAGGGTGGTATAGGAGTGGGCATCGCTCTCCTTATAGGCTCCCCTGCCAGAGAACCTGGCTTGAGTaGCCTGGGGAATCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: LQGWYRSGHRSPYRLPCQRTWLE*PGESFS
Trigger: AGAGAAGGATTCCCCAGGCAACTCAAGCCAGGTTCT...CTGGCAGGGGAGCCTATAAGGAGAGCGATGCCCACTCCTATACCACCCTTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp CCCCTGCCAGGTGAAATAGAACCAGGGCTTCCTCAAGTTTGCCTGCTGACACATTTGGCAGAACCTGGCTaGAGTTGCCTGGGGAATCCT +
Preference number: 5 (lower is better)
Translates to: PLPGEIEPGLPQVCLLTHLAEPG*SCLGNP
Trigger: AGGATTCCCCAGGCAACTCAAGCCAGGTTCTGCCAA...ATGTGTCAGCAGGCAAACTTGAGGAAGCCCTGGTTCTATTTCACCTGGCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS TCA 90 bp CAAATGTCGGGCCAGCAGCAGGAAGTCAGTGGCATACTGCCTGACTaGCTTTTGGCCCTGTTTGGGATGGCAAAGAACAGCACTGAGGAT +
Preference number: 5 (lower is better)
Translates to: QMSGQQQEVSGILPD*LLALFGMAKNSTED
Trigger: ATCCTCAGTGCTGTTCTTTGCCATCCCAAACAGGGCCAAAAGTCAGTCAGGCAGTATGCCACTGACTTCCTGCTGCTGGCCCGACATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS GCA 90 bp GGACATTGTTTCAGAGGCTGTTGCCGTAACTGGTTGGGTGGACATTaGTCCAGAAGTTGGAGCTCTCCTCAGTGGCGTGGACATCTTTCC +
Preference number: 5 (lower is better)
Translates to: GHCFRGCCRNWLGGH*SRSWSSPQWRGHLS
Trigger: GGAAAGATGTCCACGCCACTGAGGAGAGCTCCAACTTCTGGAGCAATGTCCACCCAACCAGTTACGGCAACAGCCTCTGAAACAATGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS GCA 90 bp CTCACTGTTGGTGTGGACATCACATCAGAGGTTGGGGAATTCATCTaGATCCCTCCAGCGGTCATGGACTTCATGGGCGACATGGACATC +
Preference number: 5 (lower is better)
Translates to: LTVGVDITSEVGEFI*IPPAVMDFMGDMDI
Trigger: GATGTCCATGTCGCCCATGAAGTCCATGACCGCTGGAGGGATGCAGATGAATTCCCCAACCTCTGATGTGATGTCCACACCAACAGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS GCA 90 bp GACCAAGACAAATGTCGGGCCAGCAGCAGGAAGTCAGTGGCATACTaGCTGACTGACTTTTGGCCCTGTTTGGGATGGCAAAGAACAGCA +
Preference number: 5 (lower is better)
Translates to: DQDKCRASSRKSVAY*LTDFWPCLGWQRTA
Trigger: TGCTGTTCTTTGCCATCCCAAACAGGGCCAAAAGTCAGTCAGGCAGTATGCCACTGACTTCCTGCTGCTGGCCCGACATTTGTCTTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CCA 90 bp GCAGAGTGCTGGGGTCAACATTCCGAAGGATGGCACTTCCTTTGGTaGTGGTTTCGCAGTTTCAGGAGTTGTGGCAGTCATGTGCGATGT +
Preference number: 5 (lower is better)
Translates to: AECWGQHSEGWHFLW*WFRSFRSCGSHVRC
Trigger: ACATCGCACATGACTGCCACAACTCCTGAAACTGCGAAACCACCACCAAAGGAAGTGCCATCCTTCGGAATGTTGACCCCAGCACTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CCA 90 bp GTAGCAGAGTGCTGGGGTCAACATTCCGAAGGATGGCACTTCCTTTaGTGGTGGTTTCGCAGTTTCAGGAGTTGTGGCAGTCATGTGCGA +
Preference number: 5 (lower is better)
Translates to: VAECWGQHSEGWHFL*WWFRSFRSCGSHVR
Trigger: TCGCACATGACTGCCACAACTCCTGAAACTGCGAAACCACCACCAAAGGAAGTGCCATCCTTCGGAATGTTGACCCCAGCACTCTGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp ACTGGCCTCGGTGGTGATGGGAGTTCAGAACCTCATACACCATACACTCTTGTAAAGGGCCACAATGCCTaGCACAAGGTAGGCGCTCCA +
Preference number: 5 (lower is better)
Translates to: TGLGGDGSSEPHTPYTLVKGHNA*HKVGAP
Trigger: TGGAGCGCCTACCTTGTGCAAGGCATTGTGGCCCTT...TACAAGAGTGTATGGTGTATGAGGTTCTGAACTCCCATCACCACCGAGGCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465301.2
CDS-3UTR CAA 90 bp GTCCCTACTCTGATTGTCAGGGCAGGTCTTAGGCATGTGGGTGAAAGAGAAGGTGGAGGCAAGAAAATCTaGGCTCTCACCGCTGAGAGG +
Preference number: 5 (lower is better)
Translates to: VPTLIVRAGLRHVGEREGGGKKI*ALTAER
Trigger: CCTCTCAGCGGTGAGAGCCAAGATTTTCTTGCCTCC...ACCTTCTCTTTCACCCACATGCCTAAGACCTGCCCTGACAATCAGAGTAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465301.2
CDS-3UTR CAA 90 bp TTACAAGGGTGGTATAGGAGTGGGCATCGCTCTCCTTATAGGCTCCCCTGCCAGCTCTGGTCTCTGTCATaGGTCTACAGAAGGCCATCT +
Preference number: 5 (lower is better)
Translates to: LQGWYRSGHRSPYRLPCQLWSLS*VYRRPS
Trigger: AGATGGCCTTCTGTAGACCAATGACAGAGACCAGAG...CTGGCAGGGGAGCCTATAAGGAGAGCGATGCCCACTCCTATACCACCCTTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp AGAGGTAAGGTGGGATGTGCCTGGAGCGGGAGGCTGAAGGGTGAAGGCAACAAGGTCTTCATCTGTAATTaGCAATGGGGACATTGCCTC +
Preference number: 5 (lower is better)
Translates to: RGKVGCAWSGRLKGEGNKVFICN*QWGHCL
Trigger: GAGGCAATGTCCCCATTGCAAATTACAGATGAAGAC...CTTGTTGCCTTCACCCTTCAGCCTCCCGCTCCAGGCACATCCCACCTTACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp CCAGGTGAAATAGAACCAGGGCTTCCTCAAGTTTGCCTGCTGACACATGGCAAGCTGGTTGGGTGGACATaGCTCCAGAAGTTGGAGCTC +
Preference number: 5 (lower is better)
Translates to: PGEIEPGLPQVCLLTHGKLVGWT*LQKLEL
Trigger: GAGCTCCAACTTCTGGAGCAATGTCCACCCAACCAG...CTTGCCATGTGTCAGCAGGCAAACTTGAGGAAGCCCTGGTTCTATTTCACCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp TTACAAGGGTGGTATAGGAGTGGGCATCGCTCTCCTTATAGGCTCCCCTGCCAGATTGTGGCATGGACATaGTTTCAGAGGCTGTTGCCG +
Preference number: 5 (lower is better)
Translates to: LQGWYRSGHRSPYRLPCQIVAWT*FQRLLP
Trigger: CGGCAACAGCCTCTGAAACAATGTCCATGCCACAAT...CTGGCAGGGGAGCCTATAAGGAGAGCGATGCCCACTCCTATACCACCCTTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp CCCCTGCCAGGTGAAATAGAACCAGGGCTTCCTCAAGTTTGCCTGCTGACACATTTTGCAGCATGGACATaGATCCAGAGGCTGGGACTG +
Preference number: 5 (lower is better)
Translates to: PLPGEIEPGLPQVCLLTHFAAWT*IQRLGL
Trigger: CAGTCCCAGCCTCTGGATCAATGTCCATGCTGCAAA...ATGTGTCAGCAGGCAAACTTGAGGAAGCCCTGGTTCTATTTCACCTGGCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp AACAGGGCAAGGACCCTGGAGACCCATTTTAGGTGCTATGAGTTGGGGCATATGCATCCCTCCAGGATCTaGGGTGCTCATTGGCTGACT +
Preference number: 5 (lower is better)
Translates to: NRARTLETHFRCYELGHMHPSRI*GAHWLT
Trigger: AGTCAGCCAATGAGCACCCAAGATCCTGGAGGGATG...CATATGCCCCAACTCATAGCACCTAAAATGGGTCTCCAGGGTCCTTGCCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp ACAGGGCAAGGACCCTGGAGACCCATTTTAGGTGCTATGAGTTGGGGCATATGGTCCAGGCTCTCACTGTaGGTGTGGACATCACATCAG +
Preference number: 5 (lower is better)
Translates to: TGQGPWRPILGAMSWGIWSRLSL*VWTSHQ
Trigger: CTGATGTGATGTCCACACCAACAGTGAGAGCCTGGA...CCATATGCCCCAACTCATAGCACCTAAAATGGGTCTCCAGGGTCCTTGCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp ACAGGGCAAGGACCCTGGAGACCCATTTTAGGTGCTATGAGTTGGGGCATATGGGTTCGCAACACTGGTTaGCAATGTGGACGTTGCTCC +
Preference number: 5 (lower is better)
Translates to: TGQGPWRPILGAMSWGIWVRNTG*QCGRCS
Trigger: GGAGCAACGTCCACATTGCAAACCAGTGTTGCGAAC...CCATATGCCCCAACTCATAGCACCTAAAATGGGTCTCCAGGGTCCTTGCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp CCCCTGCCAGGTGAAATAGAACCAGGGCTTCCTCAAGTTTGCCTGCTGACACATAGAACCTGGCTTGAGTaGCCTGGGGAATCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: PLPGEIEPGLPQVCLLTHRTWLE*PGESFS
Trigger: AGAGAAGGATTCCCCAGGCAACTCAAGCCAGGTTCT...ATGTGTCAGCAGGCAAACTTGAGGAAGCCCTGGTTCTATTTCACCTGGCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp ACAGGGCAAGGACCCTGGAGACCCATTTTAGGTGCTATGAGTTGGGGCATATGGAGGGCTTCCTCAAGTTaGCCTGCTGACACATGGCAA +
Preference number: 5 (lower is better)
Translates to: TGQGPWRPILGAMSWGIWRASSS*PADTWQ
Trigger: TTGCCATGTGTCAGCAGGCAAACTTGAGGAAGCCCT...CCATATGCCCCAACTCATAGCACCTAAAATGGGTCTCCAGGGTCCTTGCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp CACCCAGAGGTCAGAGCTAGAGAACCCCCACTGAGGGACAAGACAAAGGCCATAACAATGCTCCAGAGTTaGGTACTCCCATTAGAGGTG +
Preference number: 5 (lower is better)
Translates to: HPEVRAREPPLRDKTKAITMLQS*VLPLEV
Trigger: CACCTCTAATGGGAGTACCAAACTCTGGAGCATTGT...TATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAGCTCTGACCTCTGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp CCCCTGCCAGGTGAAATAGAACCAGGGCTTCCTCAAGTTTGCCTGCTGACACATAGGATGGAGCTGGCATaGCCAATGGTGATATCTCTG +
Preference number: 5 (lower is better)
Translates to: PLPGEIEPGLPQVCLLTHRMELA*PMVISL
Trigger: CAGAGATATCACCATTGGCAATGCCAGCTCCATCCT...ATGTGTCAGCAGGCAAACTTGAGGAAGCCCTGGTTCTATTTCACCTGGCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp ACAGGGCAAGGACCCTGGAGACCCATTTTAGGTGCTATGAGTTGGGGCATATGGAGGATGGAGCTGGCATaGCCAATGGTGATATCTCTG +
Preference number: 5 (lower is better)
Translates to: TGQGPWRPILGAMSWGIWRMELA*PMVISL
Trigger: CAGAGATATCACCATTGGCAATGCCAGCTCCATCCT...CCATATGCCCCAACTCATAGCACCTAAAATGGGTCTCCAGGGTCCTTGCCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp CACCCAGAGGTCAGAGCTAGAGAACCCCCACTGAGGGACAAGACAAAGGCCATAGCAGTCATTAGCACTTaGGACATTGCTTCGGTGTCT +
Preference number: 5 (lower is better)
Translates to: HPEVRAREPPLRDKTKAIAVIST*DIASVS
Trigger: AGACACCGAAGCAATGTCCAAAGTGCTAATGACTGC...TATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAGCTCTGACCTCTGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp AATGGAATGGGTCCAGGAACCAGTCCTCCAGTTAGCGGTCGAGTCAGATATCACGAGGCTGTGGCTCTCTaGTATTGTTTTGCCACGGCT +
Preference number: 5 (lower is better)
Translates to: NGMGPGTSPPVSGRVRYHEAVAL*YCFATA
Trigger: AGCCGTGGCAAAACAATACAAGAGAGCCACAGCCTC...GTGATATCTGACTCGACCGCTAACTGGAGGACTGGTTCCTGGACCCATTCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp AACAGGGCAAGGACCCTGGAGACCCATTTTAGGTGCTATGAGTTGGGGCATATGTGTTGCCGTAACTGGTaGGGTGGACATTGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: NRARTLETHFRCYELGHMCCRNW*GGHCSR
Trigger: TCTGGAGCAATGTCCACCCAACCAGTTACGGCAACA...CATATGCCCCAACTCATAGCACCTAAAATGGGTCTCCAGGGTCCTTGCCCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp CCCCTGCCAGGTGAAATAGAACCAGGGCTTCCTCAAGTTTGCCTGCTGACACATTTAACAGCGTGGATGTaGATCCAGAGGTTTGGGCTG +
Preference number: 5 (lower is better)
Translates to: PLPGEIEPGLPQVCLLTHLTAWM*IQRFGL
Trigger: CAGCCCAAACCTCTGGATCAACATCCACGCTGTTAA...ATGTGTCAGCAGGCAAACTTGAGGAAGCCCTGGTTCTATTTCACCTGGCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp GTCCCTACTCTGATTGTCAGGGCAGGTCTTAGGCATGTGGGTGAAAGAGAAGGTGGCCAGAGATCTCATTaGTGGACAGGACATCACTCC +
Preference number: 5 (lower is better)
Translates to: VPTLIVRAGLRHVGEREGGQRSH*WTGHHS
Trigger: GGAGTGATGTCCTGTCCACAAATGAGATCTCTGGCC...ACCTTCTCTTTCACCCACATGCCTAAGACCTGCCCTGACAATCAGAGTAGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp CCAGGTGAAATAGAACCAGGGCTTCCTCAAGTTTGCCTGCTGACACATGGCAAGGGCCAGAGATCTCATTaGTGGACAGGACATCACTCC +
Preference number: 5 (lower is better)
Translates to: PGEIEPGLPQVCLLTHGKGQRSH*WTGHHS
Trigger: GGAGTGATGTCCTGTCCACAAATGAGATCTCTGGCC...CTTGCCATGTGTCAGCAGGCAAACTTGAGGAAGCCCTGGTTCTATTTCACCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp CACCCAGAGGTCAGAGCTAGAGAACCCCCACTGAGGGACAAGACAAAGGCCATAACATCACATCAGAGGTaGGGGAATTCATCTGCATCC +
Preference number: 5 (lower is better)
Translates to: HPEVRAREPPLRDKTKAITSHQR*GNSSAS
Trigger: GGATGCAGATGAATTCCCCAACCTCTGATGTGATGT...TATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAGCTCTGACCTCTGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp ATGGAATGGGTCCAGGAACCAGTCCTCCAGTTAGCGGTCGAGTCAGATATCACATCGCAGTTTCAGGAGTaGTGGCAGTCATGTGCGATG +
Preference number: 5 (lower is better)
Translates to: MEWVQEPVLQLAVESDITSQFQE*WQSCAM
Trigger: CATCGCACATGACTGCCACAACTCCTGAAACTGCGA...TGTGATATCTGACTCGACCGCTAACTGGAGGACTGGTTCCTGGACCCATTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp GGCATATGGGGCAAGTCTACTGGGTTACAAGGGTGGTATAGGAGTGGGCATCGCAAGATCCGACCCATTTaGGTGGTAACAGCTTCTGAG +
Preference number: 5 (lower is better)
Translates to: GIWGKSTGLQGWYRSGHRKIRPI*VVTASE
Trigger: CTCAGAAGCTGTTACCACCAAAATGGGTCGGATCTT...GCGATGCCCACTCCTATACCACCCTTGTAACCCAGTAGACTTGCCCCATATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS TCA 90 bp TTTCGCAGTTTCAGGAGTTGTGGCAGTCATGTGCGATGTGGGCTTTaGTCCAGAGGCTGTGATGTTAATGTGAGAGGTGGATGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: FRSFRSCGSHVRCGL*SRGCDVNVRGGCLS
Trigger: GGAGAGGCATCCACCTCTCACATTAACATCACAGCCTCTGGATCAAAGCCCACATCGCACATGACTGCCACAACTCCTGAAACTGCGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS TCA 90 bp AGTGCTCTTAACTCACAGGAGAGTCACACACTGTCTTCAAGTCTCTaGAGGGCAGGCAATACTCCAGTCCTCATGGCTGGCACTTTCTCC +
Preference number: 5 (lower is better)
Translates to: SALNSQESHTLSSSL*RAGNTPVLMAGTFS
Trigger: GGAGAAAGTGCCAGCCATGAGGACTGGAGTATTGCCTGCCCTTCAGAGACTTGAAGACAGTGTGTGACTCTCCTGTGAGTTAAGAGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520821.5
CDS-3UTR CAA 90 bp GGCATATGGGGCAAGTCTACTGGGTTACAAGGGTGGTATAGGAGTGGGCATCGCGTGAATGTAAGGGTATaGACATATCTGCCACAGCCA +
Preference number: 5 (lower is better)
Translates to: GIWGKSTGLQGWYRSGHRVNVRV*TYLPQP
Trigger: TGGCTGTGGCAGATATGTCAATACCCTTACATTCAC...GCGATGCCCACTCCTATACCACCCTTGTAACCCAGTAGACTTGCCCCATATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp CACCCAGAGGTCAGAGCTAGAGAACCCCCACTGAGGGACAAGACAAAGGCCATATTAGCACTTTGGACATaGCTTCGGTGTCTTCATCTG +
Preference number: 5 (lower is better)
Translates to: HPEVRAREPPLRDKTKAILALWT*LRCLHL
Trigger: CAGATGAAGACACCGAAGCAATGTCCAAAGTGCTAA...TATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAGCTCTGACCTCTGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp CCAGAGGTCAGAGCTAGAGAACCCCCACTGAGGGACAAGACAAAGGCCATAAACTTATCAGTGAGGATATaGCTTCAGAGTCCGTGCCTG +
Preference number: 5 (lower is better)
Translates to: PEVRAREPPLRDKTKAINLSVRI*LQSPCL
Trigger: CAGGCACGGACTCTGAAGCAATATCCTCACTGATAA...GTTTATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAGCTCTGACCTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp AACAGGGCAAGGACCCTGGAGACCCATTTTAGGTGCTATGAGTTGGGGCATATGATTGTGGCATGGACATaGTTTCAGAGGCTGTTGCCG +
Preference number: 5 (lower is better)
Translates to: NRARTLETHFRCYELGHMIVAWT*FQRLLP
Trigger: CGGCAACAGCCTCTGAAACAATGTCCATGCCACAAT...CATATGCCCCAACTCATAGCACCTAAAATGGGTCTCCAGGGTCCTTGCCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp CCAGGTGAAATAGAACCAGGGCTTCCTCAAGTTTGCCTGCTGACACATGGCAAGATCGTTCCTGAGGCTTaGGGTGTCATTAGTGGCTTG +
Preference number: 5 (lower is better)
Translates to: PGEIEPGLPQVCLLTHGKIVPEA*GVISGL
Trigger: CAAGCCACTAATGACACCCAAAGCCTCAGGAACGAT...CTTGCCATGTGTCAGCAGGCAAACTTGAGGAAGCCCTGGTTCTATTTCACCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp CCACCACCTGAAGGCAAACACTGCTCACATTATGTTCTAGCTATCTATGCCTGTGGCTGTGTCTGTCATTaGCGGCATGGACAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: PPPEGKHCSHYVLAIYACGCVCH*RHGQSS
Trigger: GGAGCTCTGTCCATGCCGCAAATGACAGACACAGCC...ACAGGCATAGATAGCTAGAACATAATGTGAGCAGTGTTTGCCTTCAGGTGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp CACCCAGAGGTCAGAGCTAGAGAACCCCCACTGAGGGACAAGACAAAGGCCATAATCTTTCCAGACACTTaGGCTCTCATTAGTGAGGCA +
Preference number: 5 (lower is better)
Translates to: HPEVRAREPPLRDKTKAIIFPDT*ALISEA
Trigger: TGCCTCACTAATGAGAGCCAAAGTGTCTGGAAAGAT...TATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAGCTCTGACCTCTGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp ACAGGGCAAGGACCCTGGAGACCCATTTTAGGTGCTATGAGTTGGGGCATATGGACATCACATCAGAGGTaGGGGAATTCATCTGCATCC +
Preference number: 5 (lower is better)
Translates to: TGQGPWRPILGAMSWGIWTSHQR*GNSSAS
Trigger: GGATGCAGATGAATTCCCCAACCTCTGATGTGATGT...CCATATGCCCCAACTCATAGCACCTAAAATGGGTCTCCAGGGTCCTTGCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp ATGGAATGGGTCCAGGAACCAGTCCTCCAGTTAGCGGTCGAGTCAGATATCACAGACCATGGCTGTTGTTaGTGCAGTGGACATATGTCC +
Preference number: 5 (lower is better)
Translates to: MEWVQEPVLQLAVESDITDHGCC*CSGHMS
Trigger: GGACATATGTCCACTGCACAAACAACAGCCATGGTC...TGTGATATCTGACTCGACCGCTAACTGGAGGACTGGTTCCTGGACCCATTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp CCCCTGCCAGGTGAAATAGAACCAGGGCTTCCTCAAGTTTGCCTGCTGACACATCAGAGACCATGGCTGTaGTTTGTGCAGTGGACATAT +
Preference number: 5 (lower is better)
Translates to: PLPGEIEPGLPQVCLLTHQRPWL*FVQWTY
Trigger: ATATGTCCACTGCACAAACAACAGCCATGGTCTCTG...ATGTGTCAGCAGGCAAACTTGAGGAAGCCCTGGTTCTATTTCACCTGGCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp CTTGTAGTCCCTACTCTGATTGTCAGGGCAGGTCTTAGGCATGTGGGTGAAAGAGTTCGCAACACTGGTTaGCAATGTGGACGTTGCTCC +
Preference number: 5 (lower is better)
Translates to: LVVPTLIVRAGLRHVGERVRNTG*QCGRCS
Trigger: GGAGCAACGTCCACATTGCAAACCAGTGTTGCGAAC...TCTTTCACCCACATGCCTAAGACCTGCCCTGACAATCAGAGTAGGGACTACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp GAACCCCCACTGAGGGACAAGACAAAGGCCATAAACAACAGATCAAGAGGTCAGCCAGAGTCTGTGGCTTaGATTTCCGGAGTGGACATC +
Preference number: 5 (lower is better)
Translates to: EPPLRDKTKAINNRSRGQPESVA*ISGVDI
Trigger: GATGTCCACTCCGGAAATCAAAGCCACAGACTCTGG...CTGACCTCTTGATCTGTTGTTTATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp AACAGGGCAAGGACCCTGGAGACCCATTTTAGGTGCTATGAGTTGGGGCATATGAGGATGGCACTTCCTTaGGTGGTGGTTTCGCAGTTT +
Preference number: 5 (lower is better)
Translates to: NRARTLETHFRCYELGHMRMALP*VVVSQF
Trigger: AAACTGCGAAACCACCACCAAAGGAAGTGCCATCCT...CATATGCCCCAACTCATAGCACCTAAAATGGGTCTCCAGGGTCCTTGCCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp CCAGAGGTCAGAGCTAGAGAACCCCCACTGAGGGACAAGACAAAGGCCATAAACAAGATCCGACCCATTTaGGTGGTAACAGCTTCTGAG +
Preference number: 5 (lower is better)
Translates to: PEVRAREPPLRDKTKAINKIRPI*VVTASE
Trigger: CTCAGAAGCTGTTACCACCAAAATGGGTCGGATCTT...GTTTATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTCTCTAGCTCTGACCTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp AAGTCTACTGGGTTACAAGGGTGGTATAGGAGTGGGCATCGCTCTCCTTATAGGAGGGCTTCCTCAAGTTaGCCTGCTGACACATGGCAA +
Preference number: 5 (lower is better)
Translates to: KSTGLQGWYRSGHRSPYRRASSS*PADTWQ
Trigger: TTGCCATGTGTCAGCAGGCAAACTTGAGGAAGCCCT...CCTATAAGGAGAGCGATGCCCACTCCTATACCACCCTTGTAACCCAGTAGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS GCA 90 bp CCATGGAGTTTTACTTGTTGGTATGGGCCTTCTGATGATGGCCTGTaGTCTGTCCAAGGTGATCATGAAGACCTTCTTGGGGGTCTCCAT +
Preference number: 5 (lower is better)
Translates to: PWSFTCWYGPSDDGL*SVQGDHEDLLGGLH
Trigger: ATGGAGACCCCCAAGAAGGTCTTCATGATCACCTTGGACAGAGCACAGGCCATCATCAGAAGGCCCATACCAACAAGTAAAACTCCATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CCA 90 bp GGGACAATGCTCCAGAGTTTGGTACTCCCATTAGAGGTGCAGACATaGTGTCAAAGACTGGAGATGTCATCAACTGTGTGGATGTCCCTC +
Preference number: 5 (lower is better)
Translates to: GTMLQSLVLPLEVQT*CQRLEMSSTVWMSL
Trigger: GAGGGACATCCACACAGTTGATGACATCTCCAGTCTTTGACACCATGTCTGCACCTCTAATGGGAGTACCAAACTCTGGAGCATTGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp CCCCTGCCAGGTGAAATAGAACCAGGGCTTCCTCAAGTTTGCCTGCTGACACATGTGAATGTAAGGGTATaGACATATCTGCCACAGCCA +
Preference number: 5 (lower is better)
Translates to: PLPGEIEPGLPQVCLLTHVNVRV*TYLPQP
Trigger: TGGCTGTGGCAGATATGTCAATACCCTTACATTCAC...ATGTGTCAGCAGGCAAACTTGAGGAAGCCCTGGTTCTATTTCACCTGGCAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp CCAGGTGAAATAGAACCAGGGCTTCCTCAAGTTTGCCTGCTGACACATGGCAAGTTAATGGTGTGGACATaGCCTCAGAGGATGAAGTGC +
Preference number: 5 (lower is better)
Translates to: PGEIEPGLPQVCLLTHGKLMVWT*PQRMKC
Trigger: GCACTTCATCCTCTGAGGCAATGTCCACACCATTAA...CTTGCCATGTGTCAGCAGGCAAACTTGAGGAAGCCCTGGTTCTATTTCACCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp ACAGGGCAAGGACCCTGGAGACCCATTTTAGGTGCTATGAGTTGGGGCATATGGATTGCTCCAGAAGTTTaGGCCATTGTTAACTGTGCG +
Preference number: 5 (lower is better)
Translates to: TGQGPWRPILGAMSWGIWIAPEV*AIVNCA
Trigger: CGCACAGTTAACAATGGCCAAAACTTCTGGAGCAAT...CCATATGCCCCAACTCATAGCACCTAAAATGGGTCTCCAGGGTCCTTGCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp GGTGGTGATGGGAGTTCAGAACCTCATACACCATACACTCTTGTAGTCCCTACTTGTTGCCGTAACTGGTaGGGTGGACATTGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: GGDGSSEPHTPYTLVVPTCCRNW*GGHCSR
Trigger: TCTGGAGCAATGTCCACCCAACCAGTTACGGCAACA...AGTAGGGACTACAAGAGTGTATGGTGTATGAGGTTCTGAACTCCCATCACCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp GAACCCCCACTGAGGGACAAGACAAAGGCCATAAACAACAGATCAAGAGGTCAGGGCTGGGACTGTCAATaGTGGCATGGACATTGTTTC +
Preference number: 5 (lower is better)
Translates to: EPPLRDKTKAINNRSRGQGWDCQ*WHGHCF
Trigger: GAAACAATGTCCATGCCACAATTGACAGTCCCAGCC...CTGACCTCTTGATCTGTTGTTTATGGCCTTTGTCTTGTCCCTCAGTGGGGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp AAGTCTACTGGGTTACAAGGGTGGTATAGGAGTGGGCATCGCTCTCCTTATAGGTTAACAGCGTGGATGTaGATCCAGAGGTTTGGGCTG +
Preference number: 5 (lower is better)
Translates to: KSTGLQGWYRSGHRSPYRLTAWM*IQRFGL
Trigger: CAGCCCAAACCTCTGGATCAACATCCACGCTGTTAA...CCTATAAGGAGAGCGATGCCCACTCCTATACCACCCTTGTAACCCAGTAGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp ATGGAATGGGTCCAGGAACCAGTCCTCCAGTTAGCGGTCGAGTCAGATATCACACAGAGACCATGGCTGTaGTTTGTGCAGTGGACATAT +
Preference number: 5 (lower is better)
Translates to: MEWVQEPVLQLAVESDITQRPWL*FVQWTY
Trigger: ATATGTCCACTGCACAAACAACAGCCATGGTCTCTG...TGTGATATCTGACTCGACCGCTAACTGGAGGACTGGTTCCTGGACCCATTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp GGTGGTGATGGGAGTTCAGAACCTCATACACCATACACTCTTGTAGTCCCTACTCCAGAGTCTGTGGCTTaGATTTCCGGAGTGGACATC +
Preference number: 5 (lower is better)
Translates to: GGDGSSEPHTPYTLVVPTPESVA*ISGVDI
Trigger: GATGTCCACTCCGGAAATCAAAGCCACAGACTCTGG...AGTAGGGACTACAAGAGTGTATGGTGTATGAGGTTCTGAACTCCCATCACCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp AAGTCTACTGGGTTACAAGGGTGGTATAGGAGTGGGCATCGCTCTCCTTATAGGAGGATGGCACTTCCTTaGGTGGTGGTTTCGCAGTTT +
Preference number: 5 (lower is better)
Translates to: KSTGLQGWYRSGHRSPYRRMALP*VVVSQF
Trigger: AAACTGCGAAACCACCACCAAAGGAAGTGCCATCCT...CCTATAAGGAGAGCGATGCCCACTCCTATACCACCCTTGTAACCCAGTAGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS GCA 90 bp CACAGGAGAGTCACACACTGTCTTCAAGTCTCTGAAGGGCCACAATaGCTTGCACAAGGTAGGCGCTCCATATGTTGTAGAATTCACAGT +
Preference number: 5 (lower is better)
Translates to: HRRVTHCLQVSEGPQ*LAQGRRSICCRIHS
Trigger: ACTGTGAATTCTACAACATATGGAGCGCCTACCTTGTGCAAGGCATTGTGGCCCTTCAGAGACTTGAAGACAGTGTGTGACTCTCCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465301.2
CDS GCA 90 bp GTTGTTTGTGACAAGGACATAGATCTAGAGTTCGCAACACTGGTTTaGAATGTGGACGTTGCTCCAGAGGCCATGGTTTCCATTAGCGGC +
Preference number: 5 (lower is better)
Translates to: VVCDKDIDLEFATLV*NVDVAPEAMVSISG
Trigger: GCCGCTAATGGAAACCATGGCCTCTGGAGCAACGTCCACATTGCAAACCAGTGTTGCGAACTCTAGATCTATGTCCTTGTCACAAACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CCA 90 bp AAGTCAGTGGCATACTGCCTGACTGACTTTTGGCCCTGTTTGGGATaGCAAAGAACAGCACTGAGGATGTCTATCTCAGATAGGGAGTCA +
Preference number: 5 (lower is better)
Translates to: KSVAYCLTDFWPCLG*QRTALRMSISDRES
Trigger: TGACTCCCTATCTGAGATAGACATCCTCAGTGCTGTTCTTTGCCATCCCAAACAGGGCCAAAAGTCAGTCAGGCAGTATGCCACTGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp ATGGAATGGGTCCAGGAACCAGTCCTCCAGTTAGCGGTCGAGTCAGATATCACAGTCTTCATCTGTAATTaGCAATGGGGACATTGCCTC +
Preference number: 5 (lower is better)
Translates to: MEWVQEPVLQLAVESDITVFICN*QWGHCL
Trigger: GAGGCAATGTCCCCATTGCAAATTACAGATGAAGAC...TGTGATATCTGACTCGACCGCTAACTGGAGGACTGGTTCCTGGACCCATTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp GTCCCTACTCTGATTGTCAGGGCAGGTCTTAGGCATGTGGGTGAAAGAGAAGGTTTAGCACTTTGGACATaGCTTCGGTGTCTTCATCTG +
Preference number: 5 (lower is better)
Translates to: VPTLIVRAGLRHVGEREGLALWT*LRCLHL
Trigger: CAGATGAAGACACCGAAGCAATGTCCAAAGTGCTAA...ACCTTCTCTTTCACCCACATGCCTAAGACCTGCCCTGACAATCAGAGTAGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp CTTGTAGTCCCTACTCTGATTGTCAGGGCAGGTCTTAGGCATGTGGGTGAAAGACATCTGGAGCTGGCTTaGGTAATGTGGACATTTCTC +
Preference number: 5 (lower is better)
Translates to: LVVPTLIVRAGLRHVGERHLELA*VMWTFL
Trigger: GAGAAATGTCCACATTACCAAAGCCAGCTCCAGATG...TCTTTCACCCACATGCCTAAGACCTGCCCTGACAATCAGAGTAGGGACTACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp TTCAGAACCTCATACACCATACACTCTTGTAGTCCCTACTCTGATTGTCAGGGCTTTGCAGCATGGACATaGATCCAGAGGCTGGGACTG +
Preference number: 5 (lower is better)
Translates to: FRTSYTIHSCSPYSDCQGFAAWT*IQRLGL
Trigger: CAGTCCCAGCCTCTGGATCAATGTCCATGCTGCAAA...GCCCTGACAATCAGAGTAGGGACTACAAGAGTGTATGGTGTATGAGGTTCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp AATGGAATGGGTCCAGGAACCAGTCCTCCAGTTAGCGGTCGAGTCAGATATCACATCTTTCCAGACACTTaGGCTCTCATTAGTGAGGCA +
Preference number: 5 (lower is better)
Translates to: NGMGPGTSPPVSGRVRYHIFPDT*ALISEA
Trigger: TGCCTCACTAATGAGAGCCAAAGTGTCTGGAAAGAT...GTGATATCTGACTCGACCGCTAACTGGAGGACTGGTTCCTGGACCCATTCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp TCTAGCTATCTATGCCTGTTTATAGACCAAGACCCTCATCAAGAGTGCTGGCCATCGCAGTTTCAGGAGTaGTGGCAGTCATGTGCGATG +
Preference number: 5 (lower is better)
Translates to: SSYLCLFIDQDPHQECWPSQFQE*WQSCAM
Trigger: CATCGCACATGACTGCCACAACTCCTGAAACTGCGA...TGGCCAGCACTCTTGATGAGGGTCTTGGTCTATAAACAGGCATAGATAGCTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp AAGTCTACTGGGTTACAAGGGTGGTATAGGAGTGGGCATCGCTCTCCTTATAGGTTCTCCTACCTCCATTaGCAAGATGAACCACCTCTC +
Preference number: 5 (lower is better)
Translates to: KSTGLQGWYRSGHRSPYRFSYLH*QDEPPL
Trigger: GAGAGGTGGTTCATCTTGCAAATGGAGGTAGGAGAA...CCTATAAGGAGAGCGATGCCCACTCCTATACCACCCTTGTAACCCAGTAGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp CCACCACCTGAAGGCAAACACTGCTCACATTATGTTCTAGCTATCTATGCCTGTCTCTGGTCTCTGTCATaGGTCTACAGAAGGCCATCT +
Preference number: 5 (lower is better)
Translates to: PPPEGKHCSHYVLAIYACLWSLS*VYRRPS
Trigger: AGATGGCCTTCTGTAGACCAATGACAGAGACCAGAG...ACAGGCATAGATAGCTAGAACATAATGTGAGCAGTGTTTGCCTTCAGGTGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp TTCAGAACCTCATACACCATACACTCTTGTAGTCCCTACTCTGATTGTCAGGGCGGCTGGGACTGTCAATaGTGGCATGGACATTGTTTC +
Preference number: 5 (lower is better)
Translates to: FRTSYTIHSCSPYSDCQGGWDCQ*WHGHCF
Trigger: GAAACAATGTCCATGCCACAATTGACAGTCCCAGCC...GCCCTGACAATCAGAGTAGGGACTACAAGAGTGTATGGTGTATGAGGTTCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp TTTGAGGTAAGATATGATTTATCCTGCCTAGACTTCTCCCTGGACCAAGAACTAGGCTGTGTCTGTCATTaGCGGCATGGACAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: FEVRYDLSCLDFSLDQELGCVCH*RHGQSS
Trigger: GGAGCTCTGTCCATGCCGCAAATGACAGACACAGCC...TAGTTCTTGGTCCAGGGAGAAGTCTAGGCAGGATAAATCATATCTTACCTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp TCTAGCTATCTATGCCTGTTTATAGACCAAGACCCTCATCAAGAGTGCTGGCCAGACCATGGCTGTTGTTaGTGCAGTGGACATATGTCC +
Preference number: 5 (lower is better)
Translates to: SSYLCLFIDQDPHQECWPDHGCC*CSGHMS
Trigger: GGACATATGTCCACTGCACAAACAACAGCCATGGTC...TGGCCAGCACTCTTGATGAGGGTCTTGGTCTATAAACAGGCATAGATAGCTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS TCA 90 bp CCTACCTCCATTTGCAAGATGAACCACCTCTCTGCTGCTCCCAGATaGAGAGATACCAGAAATGCCATTCTCTCTGAATCGTCCAAAAAC +
Preference number: 5 (lower is better)
Translates to: PTSICKMNHLSAAPR*RDTRNAILSESSKN
Trigger: GTTTTTGGACGATTCAGAGAGAATGGCATTTCTGGTATCTCTTCATCTGGGAGCAGCAGAGAGGTGGTTCATCTTGCAAATGGAGGTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CCA 90 bp TCGAGTCAGATATCACAGGAGAAGATTCCATGGAGTTTTACTTGTTaGTATGGGCCTTCTGATGATGGCCTGTGCTCTGTCCAAGGTGAT +
Preference number: 5 (lower is better)
Translates to: SSQISQEKIPWSFTC*YGPSDDGLCSVQGD
Trigger: ATCACCTTGGACAGAGCACAGGCCATCATCAGAAGGCCCATACCAACAAGTAAAACTCCATGGAATCTTCTCCTGTGATATCTGACTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp GTCCCTACTCTGATTGTCAGGGCAGGTCTTAGGCATGTGGGTGAAAGAGAAGGTTCCCTCATTGTATTGTaGAATCGCAGTGAATGTAAG +
Preference number: 5 (lower is better)
Translates to: VPTLIVRAGLRHVGEREGSLIVL*NRSECK
Trigger: CTTACATTCACTGCGATTCAACAATACAATGAGGGA...ACCTTCTCTTTCACCCACATGCCTAAGACCTGCCCTGACAATCAGAGTAGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp CTTGTAGTCCCTACTCTGATTGTCAGGGCAGGTCTTAGGCATGTGGGTGAAAGATCCTCCCTCATTGTATaGTTGAATCGCAGTGAATGT +
Preference number: 5 (lower is better)
Translates to: LVVPTLIVRAGLRHVGERSSLIV*LNRSEC
Trigger: ACATTCACTGCGATTCAACAATACAATGAGGGAGGA...TCTTTCACCCACATGCCTAAGACCTGCCCTGACAATCAGAGTAGGGACTACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp TTCAGAACCTCATACACCATACACTCTTGTAGTCCCTACTCTGATTGTCAGGGCACAATGCTCCAGAGTTaGGTACTCCCATTAGAGGTG +
Preference number: 5 (lower is better)
Translates to: FRTSYTIHSCSPYSDCQGTMLQS*VLPLEV
Trigger: CACCTCTAATGGGAGTACCAAACTCTGGAGCATTGT...GCCCTGACAATCAGAGTAGGGACTACAAGAGTGTATGGTGTATGAGGTTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp CCACCACCTGAAGGCAAACACTGCTCACATTATGTTCTAGCTATCTATGCCTGTGTGCTACCATTAGCGTaGCGGACATCGTTCCAAAAT +
Preference number: 5 (lower is better)
Translates to: PPPEGKHCSHYVLAIYACVLPLA*RTSFQN
Trigger: ATTTTGGAACGATGTCCGCAACGCTAATGGTAGCAC...ACAGGCATAGATAGCTAGAACATAATGTGAGCAGTGTTTGCCTTCAGGTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp CCACCACCTGAAGGCAAACACTGCTCACATTATGTTCTAGCTATCTATGCCTGTGCAGTCATTAGCACTTaGGACATTGCTTCGGTGTCT +
Preference number: 5 (lower is better)
Translates to: PPPEGKHCSHYVLAIYACAVIST*DIASVS
Trigger: AGACACCGAAGCAATGTCCAAAGTGCTAATGACTGC...ACAGGCATAGATAGCTAGAACATAATGTGAGCAGTGTTTGCCTTCAGGTGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp TTTGAGGTAAGATATGATTTATCCTGCCTAGACTTCTCCCTGGACCAAGAACTATCCGCTTACAGGCTGTaGGCAGAACCTGGCTTGAGT +
Preference number: 5 (lower is better)
Translates to: FEVRYDLSCLDFSLDQELSAYRL*AEPGLS
Trigger: ACTCAAGCCAGGTTCTGCCAACAGCCTGTAAGCGGA...TAGTTCTTGGTCCAGGGAGAAGTCTAGGCAGGATAAATCATATCTTACCTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS TCA 90 bp AATTGGCGCTGTGGCCATCCTTCCAGACACGGTATATGTTGTTTGTaGCAAGGACATAGATCTAGAGTTCGCAACACTGGTTTGCAATGT +
Preference number: 5 (lower is better)
Translates to: NWRCGHPSRHGICCL*QGHRSRVRNTGLQC
Trigger: ACATTGCAAACCAGTGTTGCGAACTCTAGATCTATGTCCTTGTCACAAACAACATATACCGTGTCTGGAAGGATGGCCACAGCGCCAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS TCA 90 bp CTCTGCTGCTCCCAGATGAAGAGATACCAGAAATGCCATTCTCTCTaGATCGTCCAAAAACCCCTTCATTTGCTTCTCCTCATCAATCTC +
Preference number: 5 (lower is better)
Translates to: LCCSQMKRYQKCHSL*IVQKPLHLLLLINL
Trigger: GAGATTGATGAGGAGAAGCAAATGAAGGGGTTTTTGGACGATTCAGAGAGAATGGCATTTCTGGTATCTCTTCATCTGGGAGCAGCAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp AAGACAAAGGCCATAAACAACAGATCAAGAGGTCAGAAGCTGACAACACAAGAAAGTTTTGGGTGCTTGTaGGCTGGGGTGATGTACCTC +
Preference number: 5 (lower is better)
Translates to: KTKAINNRSRGQKLTTQESFGCL*AGVMYL
Trigger: GAGGTACATCACCCCAGCCAACAAGCACCCAAAACT...TTCTTGTGTTGTCAGCTTCTGACCTCTTGATCTGTTGTTTATGGCCTTTGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp TCTAGCTATCTATGCCTGTTTATAGACCAAGACCCTCATCAAGAGTGCTGGCCATGTGGCTCTCTTGTATaGTTTTGCCACGGCTTTCAT +
Preference number: 5 (lower is better)
Translates to: SSYLCLFIDQDPHQECWPCGSLV*FCHGFH
Trigger: ATGAAAGCCGTGGCAAAACAATACAAGAGAGCCACA...TGGCCAGCACTCTTGATGAGGGTCTTGGTCTATAAACAGGCATAGATAGCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp AAGTCTACTGGGTTACAAGGGTGGTATAGGAGTGGGCATCGCTCTCCTTATAGGTATCTTGCATTAGAATaGGGGATAACTCTCCAGAAT +
Preference number: 5 (lower is better)
Translates to: KSTGLQGWYRSGHRSPYRYLALE*GITLQN
Trigger: ATTCTGGAGAGTTATCCCCAATTCTAATGCAAGATA...CCTATAAGGAGAGCGATGCCCACTCCTATACCACCCTTGTAACCCAGTAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp CTTGTAGTCCCTACTCTGATTGTCAGGGCAGGTCTTAGGCATGTGGGTGAAAGATATCTTGCATTAGAATaGGGGATAACTCTCCAGAAT +
Preference number: 5 (lower is better)
Translates to: LVVPTLIVRAGLRHVGERYLALE*GITLQN
Trigger: ATTCTGGAGAGTTATCCCCAATTCTAATGCAAGATA...TCTTTCACCCACATGCCTAAGACCTGCCCTGACAATCAGAGTAGGGACTACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp ACTATTATTATGGGTCAAAACGAATGGTTCAGGATGGATACTATAAACAGGGCATTTGCAATGGGGACATaGCCTCAGAGCTGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: TIIMGQNEWFRMDTINRAFAMGT*PQSWEL
Trigger: CAGCTCCCAGCTCTGAGGCAATGTCCCCATTGCAAA...TGCCCTGTTTATAGTATCCATCCTGAACCATTCGTTTTGACCCATAATAATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp AAGACAAAGGCCATAAACAACAGATCAAGAGGTCAGAAGCTGACAACACAAGAAAGTCTACATTTTGTGTaGACCATGGGGACATCGCCC +
Preference number: 5 (lower is better)
Translates to: KTKAINNRSRGQKLTTQESLHFV*TMGTSP
Trigger: GGGCGATGTCCCCATGGTCAACACAAAATGTAGACT...TTCTTGTGTTGTCAGCTTCTGACCTCTTGATCTGTTGTTTATGGCCTTTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp TTCAGAACCTCATACACCATACACTCTTGTAGTCCCTACTCTGATTGTCAGGGCCAGAAGTTTTGGCCATaGTTAACTGTGCGGACATTA +
Preference number: 5 (lower is better)
Translates to: FRTSYTIHSCSPYSDCQGQKFWP*LTVRTL
Trigger: TAATGTCCGCACAGTTAACAATGGCCAAAACTTCTG...GCCCTGACAATCAGAGTAGGGACTACAAGAGTGTATGGTGTATGAGGTTCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp CCACCACCTGAAGGCAAACACTGCTCACATTATGTTCTAGCTATCTATGCCTGTCAGAAGTTTTGGCCATaGTTAACTGTGCGGACATTA +
Preference number: 5 (lower is better)
Translates to: PPPEGKHCSHYVLAIYACQKFWP*LTVRTL
Trigger: TAATGTCCGCACAGTTAACAATGGCCAAAACTTCTG...ACAGGCATAGATAGCTAGAACATAATGTGAGCAGTGTTTGCCTTCAGGTGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp TTTGAGGTAAGATATGATTTATCCTGCCTAGACTTCTCCCTGGACCAAGAACTAATCGTTCCTGAGGCTTaGGGTGTCATTAGTGGCTTG +
Preference number: 5 (lower is better)
Translates to: FEVRYDLSCLDFSLDQELIVPEA*GVISGL
Trigger: CAAGCCACTAATGACACCCAAAGCCTCAGGAACGAT...TAGTTCTTGGTCCAGGGAGAAGTCTAGGCAGGATAAATCATATCTTACCTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS TCA 90 bp ATTTATTTTCATGTGAGAGAGGTTCTCCTACCTCCATTTGCAAGATaGACCACCTCTCTGCTGCTCCCAGATGAAGAGATACCAGAAATG +
Preference number: 5 (lower is better)
Translates to: IYFHVREVLLPPFAR*TTSLLLPDEEIPEM
Trigger: CATTTCTGGTATCTCTTCATCTGGGAGCAGCAGAGAGGTGGTTCATCTTGCAAATGGAGGTAGGAGAACCTCTCTCACATGAAAATAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS TCA 90 bp GTCATATATGCCCTGGGATCTTCTCAGGAAAGATTTATTTTCATGTaGGAGAGGTTCTCCTACCTCCATTTGCAAGATGAACCACCTCTC +
Preference number: 5 (lower is better)
Translates to: VIYALGSSQERFIFM*ERFSYLHLQDEPPL
Trigger: GAGAGGTGGTTCATCTTGCAAATGGAGGTAGGAGAACCTCTCTCACATGAAAATAAATCTTTCCTGAGAAGATCCCAGGGCATATATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp AAGACAAAGGCCATAAACAACAGATCAAGAGGTCAGAAGCTGACAACACAAGAAGTGCTACCATTAGCGTaGCGGACATCGTTCCAAAAT +
Preference number: 5 (lower is better)
Translates to: KTKAINNRSRGQKLTTQEVLPLA*RTSFQN
Trigger: ATTTTGGAACGATGTCCGCAACGCTAATGGTAGCAC...TTCTTGTGTTGTCAGCTTCTGACCTCTTGATCTGTTGTTTATGGCCTTTGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp AAGACAAAGGCCATAAACAACAGATCAAGAGGTCAGAAGCTGACAACACAAGAATTATCAGTGAGGATATaGCTTCAGAGTCCGTGCCTG +
Preference number: 5 (lower is better)
Translates to: KTKAINNRSRGQKLTTQELSVRI*LQSPCL
Trigger: CAGGCACGGACTCTGAAGCAATATCCTCACTGATAA...TTCTTGTGTTGTCAGCTTCTGACCTCTTGATCTGTTGTTTATGGCCTTTGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp ACTATTATTATGGGTCAAAACGAATGGTTCAGGATGGATACTATAAACAGGGCACAGAGTTTTGGGTGCTaGTTGGCTGGGGTGATGTAC +
Preference number: 5 (lower is better)
Translates to: TIIMGQNEWFRMDTINRAQSFGC*LAGVMY
Trigger: GTACATCACCCCAGCCAACAAGCACCCAAAACTCTG...TGCCCTGTTTATAGTATCCATCCTGAACCATTCGTTTTGACCCATAATAATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp TTTGAGGTAAGATATGATTTATCCTGCCTAGACTTCTCCCTGGACCAAGAACTACATCTGGAGCTGGCTTaGGTAATGTGGACATTTCTC +
Preference number: 5 (lower is better)
Translates to: FEVRYDLSCLDFSLDQELHLELA*VMWTFL
Trigger: GAGAAATGTCCACATTACCAAAGCCAGCTCCAGATG...TAGTTCTTGGTCCAGGGAGAAGTCTAGGCAGGATAAATCATATCTTACCTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp AAGACAAAGGCCATAAACAACAGATCAAGAGGTCAGAAGCTGACAACACAAGAATTCTCCTACCTCCATTaGCAAGATGAACCACCTCTC +
Preference number: 5 (lower is better)
Translates to: KTKAINNRSRGQKLTTQEFSYLH*QDEPPL
Trigger: GAGAGGTGGTTCATCTTGCAAATGGAGGTAGGAGAA...TTCTTGTGTTGTCAGCTTCTGACCTCTTGATCTGTTGTTTATGGCCTTTGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp ACTATTATTATGGGTCAAAACGAATGGTTCAGGATGGATACTATAAACAGGGCAATTGCTCCAGAAGTTTaGGCCATTGTTAACTGTGCG +
Preference number: 5 (lower is better)
Translates to: TIIMGQNEWFRMDTINRAIAPEV*AIVNCA
Trigger: CGCACAGTTAACAATGGCCAAAACTTCTGGAGCAAT...TGCCCTGTTTATAGTATCCATCCTGAACCATTCGTTTTGACCCATAATAATAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS-3UTR CAA 90 bp ACTATTATTATGGGTCAAAACGAATGGTTCAGGATGGATACTATAAACAGGGCATCCTCCCTCATTGTATaGTTGAATCGCAGTGAATGT +
Preference number: 5 (lower is better)
Translates to: TIIMGQNEWFRMDTINRASSLIV*LNRSEC
Trigger: ACATTCACTGCGATTCAACAATACAATGAGGGAGGA...TGCCCTGTTTATAGTATCCATCCTGAACCATTCGTTTTGACCCATAATAATAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS TCA 72 bp GAGCCCAGGAGGCAAGAAAATCTTGGCTCTCACCGCTaGGAGGGAGCGAAGCTGGGCTTGTCACTCGGGTCT +
Preference number: 6 (lower is better)
Translates to: EPRRQENLGSHR*EGAKLGLSLGS
Trigger: AGACCCGAGTGACAAGCCCAGCTTCGCTCCCTCTCAGCGGTGAGAGCCAAGATTTTCTTGCCTCCTGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000520821.5
CDS CCA 72 bp TCTCTGAAGGGCAGGCAATACTCCAGTCCTCATGGCTaGCACTTTCTCCTGGGACCTGGAGCAGGGCTCACG +
Preference number: 6 (lower is better)
Translates to: SLKGRQYSSPHG*HFLLGPGAGLT
Trigger: CGTGAGCCCTGCTCCAGGTCCCAGGAGAAAGTGCCAGCCATGAGGACTGGAGTATTGCCTGCCCTTCAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520821.5
CDS CCA 72 bp GCATCCCTCCAGCGGTCATGGACTTCATGGGCGACATaGACATCCCTCCAGGATCTTGGGTGCTCATTGGCT +
Preference number: 6 (lower is better)
Translates to: ASLQRSWTSWAT*TSLQDLGCSLA
Trigger: AGCCAATGAGCACCCAAGATCCTGGAGGGATGTCCATGTCGCCCATGAAGTCCATGACCGCTGGAGGGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CAA 90 bp TGGCCTCCTCATTATTCCGCTTACAGGCTGTTGGCAGAACCTGGCTaGAGTTGCCTGGGGAATCCTTCTCTTCAGCCAGCTGGCACTCGG +
Preference number: 6 (lower is better)
Translates to: WPPHYSAYRLLAEPG*SCLGNPSLQPAGTR
Trigger: CCGAGTGCCAGCTGGCTGAAGAGAAGGATTCCCCAGGCAACTCAAGCCAGGTTCTGCCAACAGCCTGTAAGCGGAATAATGAGGAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CAA 72 bp TTCCGCTTACAGGCTGTTGGCAGAACCTGGCTTGAGTaGCCTGGGGAATCCTTCTCTTCAGCCAGCTGGCAC +
Preference number: 6 (lower is better)
Translates to: FRLQAVGRTWLE*PGESFSSASWH
Trigger: GTGCCAGCTGGCTGAAGAGAAGGATTCCCCAGGCAACTCAAGCCAGGTTCTGCCAACAGCCTGTAAGCGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS TCA 72 bp GGCCAGCAGCAGGAAGTCAGTGGCATACTGCCTGACTaGCTTTTGGCCCTGTTTGGGATGGCAAAGAACAGC +
Preference number: 6 (lower is better)
Translates to: GQQQEVSGILPD*LLALFGMAKNS
Trigger: GCTGTTCTTTGCCATCCCAAACAGGGCCAAAAGTCAGTCAGGCAGTATGCCACTGACTTCCTGCTGCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS TCA 72 bp GTCGGGCCAGCAGCAGGAAGTCAGTGGCATACTGCCTaGCTGACTTTTGGCCCTGTTTGGGATGGCAAAGAA +
Preference number: 6 (lower is better)
Translates to: VGPAAGSQWHTA*LTFGPVWDGKE
Trigger: TTCTTTGCCATCCCAAACAGGGCCAAAAGTCAGTCAGGCAGTATGCCACTGACTTCCTGCTGCTGGCCCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS GCA 72 bp TTCAGAGGCTGTTGCCGTAACTGGTTGGGTGGACATTaGTCCAGAAGTTGGAGCTCTCCTCAGTGGCGTGGA +
Preference number: 6 (lower is better)
Translates to: FRGCCRNWLGGH*SRSWSSPQWRG
Trigger: TCCACGCCACTGAGGAGAGCTCCAACTTCTGGAGCAATGTCCACCCAACCAGTTACGGCAACAGCCTCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS GCA 72 bp GGTGTGGACATCACATCAGAGGTTGGGGAATTCATCTaGATCCCTCCAGCGGTCATGGACTTCATGGGCGAC +
Preference number: 6 (lower is better)
Translates to: GVDITSEVGEFI*IPPAVMDFMGD
Trigger: GTCGCCCATGAAGTCCATGACCGCTGGAGGGATGCAGATGAATTCCCCAACCTCTGATGTGATGTCCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CCA 72 bp AATTCATCTGCATCCCTCCAGCGGTCATGGACTTCATaGGCGACATGGACATCCCTCCAGGATCTTGGGTGC +
Preference number: 6 (lower is better)
Translates to: NSSASLQRSWTS*ATWTSLQDLGC
Trigger: GCACCCAAGATCCTGGAGGGATGTCCATGTCGCCCATGAAGTCCATGACCGCTGGAGGGATGCAGATGAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CCA 72 bp CTTGAGTTGCCTGGGGAATCCTTCTCTTCAGCCAGCTaGCACTCGGTGTACAGAGACCTGTCTATCAGCTCC +
Preference number: 6 (lower is better)
Translates to: LELPGESFSSAS*HSVYRDLSISS
Trigger: GGAGCTGATAGACAGGTCTCTGTACACCGAGTGCCAGCTGGCTGAAGAGAAGGATTCCCCAGGCAACTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CAA 90 bp AGCGGTCATGGACTTCATGGGCGACATGGACATCCCTCCAGGATCTaGGGTGCTCATTGGCTGACTGAGCATCTTTCCAGACACTTTGGC +
Preference number: 6 (lower is better)
Translates to: SGHGLHGRHGHPSRI*GAHWLTEHLSRHFG
Trigger: GCCAAAGTGTCTGGAAAGATGCTCAGTCAGCCAATGAGCACCCAAGATCCTGGAGGGATGTCCATGTCGCCCATGAAGTCCATGACCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CAA 90 bp CAGAGGTCCAGGCTCTCACTGTTGGTGTGGACATCACATCAGAGGTaGGGGAATTCATCTGCATCCCTCCAGCGGTCATGGACTTCATGG +
Preference number: 6 (lower is better)
Translates to: QRSRLSLLVWTSHQR*GNSSASLQRSWTSW
Trigger: CCATGAAGTCCATGACCGCTGGAGGGATGCAGATGAATTCCCCAACCTCTGATGTGATGTCCACACCAACAGTGAGAGCCTGGACCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CAA 90 bp GGTAGCAGAGTGCTGGGGTCAACATTCCGAAGGATGGCACTTCCTTaGGTGGTGGTTTCGCAGTTTCAGGAGTTGTGGCAGTCATGTGCG +
Preference number: 6 (lower is better)
Translates to: GSRVLGSTFRRMALP*VVVSQFQELWQSCA
Trigger: CGCACATGACTGCCACAACTCCTGAAACTGCGAAACCACCACCAAAGGAAGTGCCATCCTTCGGAATGTTGACCCCAGCACTCTGCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CAA 90 bp TCCTCATTATTCCGCTTACAGGCTGTTGGCAGAACCTGGCTTGAGTaGCCTGGGGAATCCTTCTCTTCAGCCAGCTGGCACTCGGTGTAC +
Preference number: 6 (lower is better)
Translates to: SSLFRLQAVGRTWLE*PGESFSSASWHSVY
Trigger: GTACACCGAGTGCCAGCTGGCTGAAGAGAAGGATTCCCCAGGCAACTCAAGCCAGGTTCTGCCAACAGCCTGTAAGCGGAATAATGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS GCA 72 bp AAATGTCGGGCCAGCAGCAGGAAGTCAGTGGCATACTaGCTGACTGACTTTTGGCCCTGTTTGGGATGGCAA +
Preference number: 6 (lower is better)
Translates to: KCRASSRKSVAY*LTDFWPCLGWQ
Trigger: TTGCCATCCCAAACAGGGCCAAAAGTCAGTCAGGCAGTATGCCACTGACTTCCTGCTGCTGGCCCGACATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS GCA 72 bp CGGTGTACAGAGACCTGTCTATCAGCTCCTTTAGGCTaGCAGCCACCTTCAGGAAGATCCGACCCATTTTGG +
Preference number: 6 (lower is better)
Translates to: RCTETCLSAPLG*QPPSGRSDPFW
Trigger: CCAAAATGGGTCGGATCTTCCTGAAGGTGGCTGGCAGCCTAAAGGAGCTGATAGACAGGTCTCTGTACACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CCA 72 bp GGCTCTCACTGTTGGTGTGGACATCACATCAGAGGTTaGGGAATTCATCTGCATCCCTCCAGCGGTCATGGA +
Preference number: 6 (lower is better)
Translates to: GSHCWCGHHIRG*GIHLHPSSGHG
Trigger: TCCATGACCGCTGGAGGGATGCAGATGAATTCCCCAACCTCTGATGTGATGTCCACACCAACAGTGAGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CCA 72 bp GAGGTAGCAGAGTGCTGGGGTCAACATTCCGAAGGATaGCACTTCCTTTGGTGGTGGTTTCGCAGTTTCAGG +
Preference number: 6 (lower is better)
Translates to: EVAECWGQHSEG*HFLWWWFRSFR
Trigger: CCTGAAACTGCGAAACCACCACCAAAGGAAGTGCCATCCTTCGGAATGTTGACCCCAGCACTCTGCTACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CCA 72 bp GGGGGTCTCCATGCTCTTTCAGGTAGTAACAGCGTTTaGAAACATGCTGGTGCTCCTCAGTCTGCTGCTGAG +
Preference number: 6 (lower is better)
Translates to: GGLHALSGSNSV*KHAGAPQSAAE
Trigger: CTCAGCAGCAGACTGAGGAGCACCAGCATGTTTCCAAACGCTGTTACTACCTGAAAGAGCATGGAGACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CAA 72 bp GGACTTCATGGGCGACATGGACATCCCTCCAGGATCTaGGGTGCTCATTGGCTGACTGAGCATCTTTCCAGA +
Preference number: 6 (lower is better)
Translates to: GLHGRHGHPSRI*GAHWLTEHLSR
Trigger: TCTGGAAAGATGCTCAGTCAGCCAATGAGCACCCAAGATCCTGGAGGGATGTCCATGTCGCCCATGAAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CAA 72 bp AGGCTCTCACTGTTGGTGTGGACATCACATCAGAGGTaGGGGAATTCATCTGCATCCCTCCAGCGGTCATGG +
Preference number: 6 (lower is better)
Translates to: RLSLLVWTSHQR*GNSSASLQRSW
Trigger: CCATGACCGCTGGAGGGATGCAGATGAATTCCCCAACCTCTGATGTGATGTCCACACCAACAGTGAGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CAA 72 bp GTGCTGGGGTCAACATTCCGAAGGATGGCACTTCCTTaGGTGGTGGTTTCGCAGTTTCAGGAGTTGTGGCAG +
Preference number: 6 (lower is better)
Translates to: VLGSTFRRMALP*VVVSQFQELWQ
Trigger: CTGCCACAACTCCTGAAACTGCGAAACCACCACCAAAGGAAGTGCCATCCTTCGGAATGTTGACCCCAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS TCA 72 bp ATTATTCCGCTTACAGGCTGTTGGCAGAACCTGGCTTaGGTTGCCTGGGGAATCCTTCTCTTCAGCCAGCTG +
Preference number: 6 (lower is better)
Translates to: IIPLTGCWQNLA*VAWGILLFSQL
Trigger: CAGCTGGCTGAAGAGAAGGATTCCCCAGGCAACTCAAGCCAGGTTCTGCCAACAGCCTGTAAGCGGAATAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS TCA 72 bp AACTCACAGGAGAGTCACACACTGTCTTCAAGTCTCTaGAGGGCAGGCAATACTCCAGTCCTCATGGCTGGC +
Preference number: 6 (lower is better)
Translates to: NSQESHTLSSSL*RAGNTPVLMAG
Trigger: GCCAGCCATGAGGACTGGAGTATTGCCTGCCCTTCAGAGACTTGAAGACAGTGTGTGACTCTCCTGTGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520821.5
CDS CCA 72 bp GGACATTGCTTCGGTGTCTTCATCTGTAATTTGCAATaGGGACATTGCCTCAGAGCTGGGAGCTGGCACTGG +
Preference number: 6 (lower is better)
Translates to: GHCFGVFICNLQ*GHCLRAGSWHW
Trigger: CCAGTGCCAGCTCCCAGCTCTGAGGCAATGTCCCCATTGCAAATTACAGATGAAGACACCGAAGCAATGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CCA 72 bp CTTCCTTTGGTGGTGGTTTCGCAGTTTCAGGAGTTGTaGCAGTCATGTGCGATGTGGGCTTTGATCCAGAGG +
Preference number: 6 (lower is better)
Translates to: LPLVVVSQFQEL*QSCAMWALIQR
Trigger: CCTCTGGATCAAAGCCCACATCGCACATGACTGCCACAACTCCTGAAACTGCGAAACCACCACCAAAGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CCA 72 bp TGCTGGGGTCAACATTCCGAAGGATGGCACTTCCTTTaGTGGTGGTTTCGCAGTTTCAGGAGTTGTGGCAGT +
Preference number: 6 (lower is better)
Translates to: CWGQHSEGWHFL*WWFRSFRSCGS
Trigger: ACTGCCACAACTCCTGAAACTGCGAAACCACCACCAAAGGAAGTGCCATCCTTCGGAATGTTGACCCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CCA 72 bp AGCAGGAAGTCAGTGGCATACTGCCTGACTGACTTTTaGCCCTGTTTGGGATGGCAAAGAACAGCACTGAGG +
Preference number: 6 (lower is better)
Translates to: SRKSVAYCLTDF*PCLGWQRTALR
Trigger: CCTCAGTGCTGTTCTTTGCCATCCCAAACAGGGCCAAAAGTCAGTCAGGCAGTATGCCACTGACTTCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CCA 72 bp CTTCTGAGAGTCCTTCCAGAAACCTGGTCCGTAGAATaGCATCAGACCAAGACAAATGTCGGGCCAGCAGCA +
Preference number: 6 (lower is better)
Translates to: LLRVLPETWSVE*HQTKTNVGPAA
Trigger: TGCTGCTGGCCCGACATTTGTCTTGGTCTGATGCCATTCTACGGACCAGGTTTCTGGAAGGACTCTCAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CCA 72 bp TCCTCATTATTCCGCTTACAGGCTGTTGGCAGAACCTaGCTTGAGTTGCCTGGGGAATCCTTCTCTTCAGCC +
Preference number: 6 (lower is better)
Translates to: SSLFRLQAVGRT*LELPGESFSSA
Trigger: GGCTGAAGAGAAGGATTCCCCAGGCAACTCAAGCCAGGTTCTGCCAACAGCCTGTAAGCGGAATAATGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CAA 72 bp GCACTTCCTTTGGTGGTGGTTTCGCAGTTTCAGGAGTaGTGGCAGTCATGTGCGATGTGGGCTTTGATCCAG +
Preference number: 6 (lower is better)
Translates to: ALPLVVVSQFQE*WQSCAMWALIQ
Trigger: CTGGATCAAAGCCCACATCGCACATGACTGCCACAACTCCTGAAACTGCGAAACCACCACCAAAGGAAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CAA 72 bp CATTATTCCGCTTACAGGCTGTTGGCAGAACCTGGCTaGAGTTGCCTGGGGAATCCTTCTCTTCAGCCAGCT +
Preference number: 6 (lower is better)
Translates to: HYSAYRLLAEPG*SCLGNPSLQPA
Trigger: AGCTGGCTGAAGAGAAGGATTCCCCAGGCAACTCAAGCCAGGTTCTGCCAACAGCCTGTAAGCGGAATAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS GCA 72 bp CATCTTTCCAGAGGCTGTGGCTCTCTTGTATTGTTTTaGCACGGCTTTCATAGAGCCTGTGGGCATTGCTCC +
Preference number: 6 (lower is better)
Translates to: HLSRGCGSLVLF*HGFHRACGHCS
Trigger: GGAGCAATGCCCACAGGCTCTATGAAAGCCGTGGCAAAACAATACAAGAGAGCCACAGCCTCTGGAAAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CCA 72 bp GTAGGTATTCCCCCAGAGTTTTGGGTGCTTGTTGGCTaGGGTGATGTACCTCCAGAAGCTACAGCTGACATT +
Preference number: 6 (lower is better)
Translates to: VGIPPEFWVLVG*GDVPPEATADI
Trigger: AATGTCAGCTGTAGCTTCTGGAGGTACATCACCCCAGCCAACAAGCACCCAAAACTCTGGGGGAATACCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CCA 72 bp GGTCAACATTCCGAAGGATGGCACTTCCTTTGGTGGTaGTTTCGCAGTTTCAGGAGTTGTGGCAGTCATGTG +
Preference number: 6 (lower is better)
Translates to: GQHSEGWHFLWW*FRSFRSCGSHV
Trigger: CACATGACTGCCACAACTCCTGAAACTGCGAAACCACCACCAAAGGAAGTGCCATCCTTCGGAATGTTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CCA 72 bp TGGGGTCAACATTCCGAAGGATGGCACTTCCTTTGGTaGTGGTTTCGCAGTTTCAGGAGTTGTGGCAGTCAT +
Preference number: 6 (lower is better)
Translates to: WGQHSEGWHFLW*WFRSFRSCGSH
Trigger: ATGACTGCCACAACTCCTGAAACTGCGAAACCACCACCAAAGGAAGTGCCATCCTTCGGAATGTTGACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CAA 90 bp AGCAGGAAGTCAGTGGCATACTGCCTGACTGACTTTTGGCCCTGTTaGGGATGGCAAAGAACAGCACTGAGGATGTCTATCTCAGATAGG +
Preference number: 6 (lower is better)
Translates to: SRKSVAYCLTDFWPC*GWQRTALRMSISDR
Trigger: CCTATCTGAGATAGACATCCTCAGTGCTGTTCTTTGCCATCCCAAACAGGGCCAAAAGTCAGTCAGGCAGTATGCCACTGACTTCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CAA 90 bp CTGATGATGGCCTGTGCTCTGTCCAAGGTGATCATGAAGACCTTCTaGGGGGTCTCCATGCTCTTTCAGGTAGTAACAGCGTTTGGAAAC +
Preference number: 6 (lower is better)
Translates to: LMMACALSKVIMKTF*GVSMLFQVVTAFGN
Trigger: GTTTCCAAACGCTGTTACTACCTGAAAGAGCATGGAGACCCCCAAGAAGGTCTTCATGATCACCTTGGACAGAGCACAGGCCATCATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS TCA 72 bp ATGGACATCCCTCCAGGATCTTGGGTGCTCATTGGCTaGCTGAGCATCTTTCCAGACACTTTGGCTCTCATT +
Preference number: 6 (lower is better)
Translates to: MDIPPGSWVLIG*LSIFPDTLALI
Trigger: AATGAGAGCCAAAGTGTCTGGAAAGATGCTCAGTCAGCCAATGAGCACCCAAGATCCTGGAGGGATGTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS TCA 72 bp TTCAGGAGTTGTGGCAGTCATGTGCGATGTGGGCTTTaGTCCAGAGGCTGTGATGTTAATGTGAGAGGTGGA +
Preference number: 6 (lower is better)
Translates to: FRSCGSHVRCGL*SRGCDVNVRGG
Trigger: TCCACCTCTCACATTAACATCACAGCCTCTGGATCAAAGCCCACATCGCACATGACTGCCACAACTCCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS GCA 72 bp GTCACACACTGTCTTCAAGTCTCTGAAGGGCCACAATaGCTTGCACAAGGTAGGCGCTCCATATGTTGTAGA +
Preference number: 6 (lower is better)
Translates to: VTHCLQVSEGPQ*LAQGRRSICCR
Trigger: TCTACAACATATGGAGCGCCTACCTTGTGCAAGGCATTGTGGCCCTTCAGAGACTTGAAGACAGTGTGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465301.2
CDS GCA 72 bp ACTTTGGACATTGCTTCGGTGTCTTCATCTGTAATTTaGAATGGGGACATTGCCTCAGAGCTGGGAGCTGGC +
Preference number: 6 (lower is better)
Translates to: TLDIASVSSSVI*NGDIASELGAG
Trigger: GCCAGCTCCCAGCTCTGAGGCAATGTCCCCATTGCAAATTACAGATGAAGACACCGAAGCAATGTCCAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS GCA 72 bp GACAAGGACATAGATCTAGAGTTCGCAACACTGGTTTaGAATGTGGACGTTGCTCCAGAGGCCATGGTTTCC +
Preference number: 6 (lower is better)
Translates to: DKDIDLEFATLV*NVDVAPEAMVS
Trigger: GGAAACCATGGCCTCTGGAGCAACGTCCACATTGCAAACCAGTGTTGCGAACTCTAGATCTATGTCCTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CCA 72 bp ATGCAGAATCTGTACGTCTGCTCTGGTCTCTGTCATTaGTCTACAGAAGGCCATCTGCTTGTTTTGGGGCTC +
Preference number: 6 (lower is better)
Translates to: MQNLYVCSGLCH*STEGHLLVLGL
Trigger: GAGCCCCAAAACAAGCAGATGGCCTTCTGTAGACCAATGACAGAGACCAGAGCAGACGTACAGATTCTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000465301.2
ENST00000520821.5
ENST00000540313.1
CDS CAA 90 bp GGAGAGTCACACACTGTCTTCAAGTCTCTGAAGGGCCACAATGCCTaGCACAAGGTAGGCGCTCCATATGTTGTAGAATTCACAGTCAGT +
Preference number: 6 (lower is better)
Translates to: GESHTVFKSLKGHNA*HKVGAPYVVEFTVS
Trigger: ACTGACTGTGAATTCTACAACATATGGAGCGCCTACCTTGTGCAAGGCATTGTGGCCCTTCAGAGACTTGAAGACAGTGTGTGACTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465301.2
CDS TCA 72 bp CATGTGAGAGAGGTTCTCCTACCTCCATTTGCAAGATaGACCACCTCTCTGCTGCTCCCAGATGAAGAGATA +
Preference number: 6 (lower is better)
Translates to: HVREVLLPPFAR*TTSLLLPDEEI
Trigger: TATCTCTTCATCTGGGAGCAGCAGAGAGGTGGTTCATCTTGCAAATGGAGGTAGGAGAACCTCTCTCACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS GCA 72 bp TTTACTTGTTGGTATGGGCCTTCTGATGATGGCCTGTaGTCTGTCCAAGGTGATCATGAAGACCTTCTTGGG +
Preference number: 6 (lower is better)
Translates to: FTCWYGPSDDGL*SVQGDHEDLLG
Trigger: CCCAAGAAGGTCTTCATGATCACCTTGGACAGAGCACAGGCCATCATCAGAAGGCCCATACCAACAAGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CCA 72 bp ACATTGTTTCAGAGGTCCAGGCTCTCACTGTTGGTGTaGACATCACATCAGAGGTTGGGGAATTCATCTGCA +
Preference number: 6 (lower is better)
Translates to: TLFQRSRLSLLV*TSHQRLGNSSA
Trigger: TGCAGATGAATTCCCCAACCTCTGATGTGATGTCCACACCAACAGTGAGAGCCTGGACCTCTGAAACAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CAA 72 bp CACACTGTCTTCAAGTCTCTGAAGGGCCACAATGCCTaGCACAAGGTAGGCGCTCCATATGTTGTAGAATTC +
Preference number: 6 (lower is better)
Translates to: HTVFKSLKGHNA*HKVGAPYVVEF
Trigger: GAATTCTACAACATATGGAGCGCCTACCTTGTGCAAGGCATTGTGGCCCTTCAGAGACTTGAAGACAGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465301.2
CDS CAA 72 bp CTCCAGAAGCTACAGCTGACATTATCAGTGAGGATATaGCTTCAGAGTCCGTGCCTGACATTAGCAGCGAAG +
Preference number: 6 (lower is better)
Translates to: LQKLQLTLSVRI*LQSPCLTLAAK
Trigger: CTTCGCTGCTAATGTCAGGCACGGACTCTGAAGCAATATCCTCACTGATAATGTCAGCTGTAGCTTCTGGAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CAA 90 bp GTGATGTACCTCCAGAAGCTACAGCTGACATTATCAGTGAGGATATaGCTTCAGAGTCCGTGCCTGACATTAGCAGCGAAGATATCTCTC +
Preference number: 6 (lower is better)
Translates to: VMYLQKLQLTLSVRI*LQSPCLTLAAKISL
Trigger: GAGAGATATCTTCGCTGCTAATGTCAGGCACGGACTCTGAAGCAATATCCTCACTGATAATGTCAGCTGTAGCTTCTGGAGGTACATCAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS GCA 72 bp AGGCAACTGTACATGAGAATGCAGAATCTGTACGTCTaGTCTGGTCTCTGTCATTGGTCTACAGAAGGCCAT +
Preference number: 6 (lower is better)
Translates to: RQLYMRMQNLYV*SGLCHWSTEGH
Trigger: ATGGCCTTCTGTAGACCAATGACAGAGACCAGAGCAGACGTACAGATTCTGCATTCTCATGTACAGTTGCCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465301.2
ENST00000520821.5
ENST00000540313.1
CDS GCA 72 bp TCCTACCTCCATTTGCAAGATGAACCACCTCTCTGCTaGTCCCAGATGAAGAGATACCAGAAATGCCATTCT +
Preference number: 6 (lower is better)
Translates to: SYLHLQDEPPLC*SQMKRYQKCHS
Trigger: AGAATGGCATTTCTGGTATCTCTTCATCTGGGAGCAGCAGAGAGGTGGTTCATCTTGCAAATGGAGGTAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CAA 72 bp GCTTTCATAGAGCCTGTGGGCATTGCTCCAGAAGTTTaGGCCATTGTTAACTGTGCGGACATTACTCTAGAG +
Preference number: 6 (lower is better)
Translates to: AFIEPVGIAPEV*AIVNCADITLE
Trigger: CTCTAGAGTAATGTCCGCACAGTTAACAATGGCCAAAACTTCTGGAGCAATGCCCACAGGCTCTATGAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS TCA 72 bp ATTTGCAAGATGAACCACCTCTCTGCTGCTCCCAGATaGAGAGATACCAGAAATGCCATTCTCTCTGAATCG +
Preference number: 6 (lower is better)
Translates to: ICKMNHLSAAPR*RDTRNAILSES
Trigger: CGATTCAGAGAGAATGGCATTTCTGGTATCTCTTCATCTGGGAGCAGCAGAGAGGTGGTTCATCTTGCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS TCA 72 bp TCCCAGATGAAGAGATACCAGAAATGCCATTCTCTCTaGATCGTCCAAAAACCCCTTCATTTGCTTCTCCTC +
Preference number: 6 (lower is better)
Translates to: SQMKRYQKCHSL*IVQKPLHLLLL
Trigger: GAGGAGAAGCAAATGAAGGGGTTTTTGGACGATTCAGAGAGAATGGCATTTCTGGTATCTCTTCATCTGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS CAA 72 bp GTGATATCTCTGCAGAATCTGGTGCTACCATTAGCGTaGCGGACATCGTTCCAAAATCAGGAATTGTCATCA +
Preference number: 6 (lower is better)
Translates to: VISLQNLVLPLA*RTSFQNQELSS
Trigger: TGATGACAATTCCTGATTTTGGAACGATGTCCGCAACGCTAATGGTAGCACCAGATTCTGCAGAGATATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1
CDS TCA 72 bp GCCCTGGGATCTTCTCAGGAAAGATTTATTTTCATGTaGGAGAGGTTCTCCTACCTCCATTTGCAAGATGAA +
Preference number: 6 (lower is better)
Translates to: ALGSSQERFIFM*ERFSYLHLQDE
Trigger: TTCATCTTGCAAATGGAGGTAGGAGAACCTCTCTCACATGAAAATAAATCTTTCCTGAGAAGATCCCAGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465301.2
ENST00000540313.1