RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RTL10 (Homo sapiens)

Ensembl gene IDs: ENSG00000215012

Ensembl transcript IDs: ENST00000328554.9, ENST00000405640.1, ENST00000407472.5, ENST00000416337.1, ENST00000484072.5

Found 976 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGGCCCCAGAACCCAGGGCCTGGGGGACTCTGCACACAGGCATGTaGAGACCACAGAAGCCTGCCCAATATAGCGCTGCCAGGAACAGC +
Preference number: 1 (lower is better)
Translates to: WAPEPRAWGTLHTGM*RPQKPAQYSAARNS
Trigger: GCTGTTCCTGGCAGCGCTATATTGGGCAGGCTTCTGTGGTCTCCACATGCCTGTGTGCAGAGTCCCCCAGGCCCTGGGTTCTGGGGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR GCA 90 bp CCCACTCCTCAGTATGGGCCCCAGAACCCAGGGCCTGGGGGACTCTaGACACAGGCATGTGGAGACCACAGAAGCCTGCCCAATATAGCG +
Preference number: 1 (lower is better)
Translates to: PTPQYGPQNPGPGGL*TQACGDHRSLPNIA
Trigger: CGCTATATTGGGCAGGCTTCTGTGGTCTCCACATGCCTGTGTGCAGAGTCCCCCAGGCCCTGGGTTCTGGGGCCCATACTGAGGAGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR GCA 90 bp AGAGAGCCAGCAGCAGGGAAAGGGCACAGGGCGGAGGTCAAGCTCTaGTGGAGTTGGGGGAGCTGGTTCTGCTCAGCGCAGAGTCCAAAA +
Preference number: 1 (lower is better)
Translates to: REPAAGKGHRAEVKL*WSWGSWFCSAQSPK
Trigger: TTTTGGACTCTGCGCTGAGCAGAACCAGCTCCCCCAACTCCAGCAGAGCTTGACCTCCGCCCTGTGCCCTTTCCCTGCTGCTGGCTCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CCA 90 bp GAGCCAGCAGCAGGGAAAGGGCACAGGGCGGAGGTCAAGCTCTGCTaGAGTTGGGGGAGCTGGTTCTGCTCAGCGCAGAGTCCAAAACAA +
Preference number: 1 (lower is better)
Translates to: EPAAGKGHRAEVKLC*SWGSWFCSAQSPKQ
Trigger: TTGTTTTGGACTCTGCGCTGAGCAGAACCAGCTCCCCCAACTCCAGCAGAGCTTGACCTCCGCCCTGTGCCCTTTCCCTGCTGCTGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CCA 90 bp TCCCATACAGCACAACTGGGCACTGCCTACTCAACAGCCAAGGCTTaGCCATCCCCACTCCTCAGTATGGGCCCCAGAACCCAGGGCCTG +
Preference number: 1 (lower is better)
Translates to: SHTAQLGTAYSTAKA*PSPLLSMGPRTQGL
Trigger: CAGGCCCTGGGTTCTGGGGCCCATACTGAGGAGTGGGGATGGCCAAGCCTTGGCTGTTGAGTAGGCAGTGCCCAGTTGTGCTGTATGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR GCA 90 bp TGCAGCAGCTGGCAACAAAGCCACTCTGAAAGGAGCTGTGTGCACTaGCTGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCC +
Preference number: 1 (lower is better)
Translates to: CSSWQQSHSERSCVH*LSGRPCQSPSLPPP
Trigger: GGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACAGGCAGTGCACACAGCTCCTTTCAGAGTGGCTTTGTTGCCAGCTGCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR GCA 90 bp AAGCACCAGAGTGGGCACACACTGCACACACTGGGCGGCTGTACCTaGCTATCCTGTGGTAAACTTGGCTCCAGGAGCTTCCAAGCTCAG +
Preference number: 1 (lower is better)
Translates to: KHQSGHTLHTLGGCT*LSCGKLGSRSFQAQ
Trigger: CTGAGCTTGGAAGCTCCTGGAGCCAAGTTTACCACAGGATAGGCAGGTACAGCCGCCCAGTGTGTGCAGTGTGTGCCCACTCTGGTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR GCA 90 bp AGCCACTCTGAAAGGAGCTGTGTGCACTGCCTGTCTGGAAGGCCATaGCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGAAACCT +
Preference number: 1 (lower is better)
Translates to: SHSERSCVHCLSGRP*QSPSLPPPYLCRKP
Trigger: AGGTTTCCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACAGGCAGTGCACACAGCTCCTTTCAGAGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR GCA 90 bp TTAGGACACAGACACAGACAGGGACACGGCAAGAAGATGGCTATCTaGAGGCCAAGGAGCGAGGCCTCAGGAGAAACCAACCCTGCCCAC +
Preference number: 1 (lower is better)
Translates to: LGHRHRQGHGKKMAI*RPRSEASGETNPAH
Trigger: GTGGGCAGGGTTGGTTTCTCCTGAGGCCTCGCTCCTTGGCCTGCAGATAGCCATCTTCTTGCCGTGTCCCTGTCTGTGTCTGTGTCCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CCA 90 bp TTCCATTCCTCTGGGCCTGGGGCCTCACAGCTCTGGACTGCTGCCTaGTCCTCACTTCACCTACAGCTCTCGGAAGTCAGTTCTCTACCT +
Preference number: 1 (lower is better)
Translates to: FHSSGPGASQLWTAA*SSLHLQLSEVSSLP
Trigger: AGGTAGAGAACTGACTTCCGAGAGCTGTAGGTGAAGTGAGGACCAGGCAGCAGTCCAGAGCTGTGAGGCCCCAGGCCCAGAGGAATGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CCA 90 bp GGTCTTTCTTCATTCCATTCCTCTGGGCCTGGGGCCTCACAGCTCTaGACTGCTGCCTGGTCCTCACTTCACCTACAGCTCTCGGAAGTC +
Preference number: 1 (lower is better)
Translates to: GLSSFHSSGPGASQL*TAAWSSLHLQLSEV
Trigger: GACTTCCGAGAGCTGTAGGTGAAGTGAGGACCAGGCAGCAGTCCAGAGCTGTGAGGCCCCAGGCCCAGAGGAATGGAATGAAGAAAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CCA 90 bp GGTCCACTAAAGGGAGATGGGGAAGGTGGCCTGTCCAGAAGCCTGTaGGACAGGGTAAAGGTCAGCTGGGTGACTAGGCTGTCCATCCTA +
Preference number: 1 (lower is better)
Translates to: GPLKGDGEGGLSRSL*DRVKVSWVTRLSIL
Trigger: TAGGATGGACAGCCTAGTCACCCAGCTGACCTTTACCCTGTCCCACAGGCTTCTGGACAGGCCACCTTCCCCATCTCCCTTTAGTGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CCA 90 bp GGCTGGAGTATCCACTTCAGGTCCACTAAAGGGAGATGGGGAAGGTaGCCTGTCCAGAAGCCTGTGGGACAGGGTAAAGGTCAGCTGGGT +
Preference number: 1 (lower is better)
Translates to: GWSIHFRSTKGRWGR*PVQKPVGQGKGQLG
Trigger: ACCCAGCTGACCTTTACCCTGTCCCACAGGCTTCTGGACAGGCCACCTTCCCCATCTCCCTTTAGTGGACCTGAAGTGGATACTCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CCA 90 bp ACCAGGTCACCTGGACTCTCCCAAGGACTCTCAAGCCTGCCTAGGTaGATGCTGCATGACTGGCCCTCAGACACACGGCAGACCATAACT +
Preference number: 1 (lower is better)
Translates to: TRSPGLSQGLSSLPR*MLHDWPSDTRQTIT
Trigger: AGTTATGGTCTGCCGTGTGTCTGAGGGCCAGTCATGCAGCATCCACCTAGGCAGGCTTGAGAGTCCTTGGGAGAGTCCAGGTGACCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR GCA 90 bp TTCATTCCATTCCTCTGGGCCTGGGGCCTCACAGCTCTGGACTGCTaGCTGGTCCTCACTTCACCTACAGCTCTCGGAAGTCAGTTCTCT +
Preference number: 1 (lower is better)
Translates to: FIPFLWAWGLTALDC*LVLTSPTALGSQFS
Trigger: AGAGAACTGACTTCCGAGAGCTGTAGGTGAAGTGAGGACCAGGCAGCAGTCCAGAGCTGTGAGGCCCCAGGCCCAGAGGAATGGAATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR GCA 90 bp TTCTTCATTCCATTCCTCTGGGCCTGGGGCCTCACAGCTCTGGACTaGTGCCTGGTCCTCACTTCACCTACAGCTCTCGGAAGTCAGTTC +
Preference number: 1 (lower is better)
Translates to: FFIPFLWAWGLTALD*CLVLTSPTALGSQF
Trigger: GAACTGACTTCCGAGAGCTGTAGGTGAAGTGAGGACCAGGCAGCAGTCCAGAGCTGTGAGGCCCCAGGCCCAGAGGAATGGAATGAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CCA 90 bp CTCCTTGTGTGGAACAGGTCTTTCTTCATTCCATTCCTCTGGGCCTaGGGCCTCACAGCTCTGGACTGCTGCCTGGTCCTCACTTCACCT +
Preference number: 1 (lower is better)
Translates to: LLVWNRSFFIPFLWA*GLTALDCCLVLTSP
Trigger: AGGTGAAGTGAGGACCAGGCAGCAGTCCAGAGCTGTGAGGCCCCAGGCCCAGAGGAATGGAATGAAGAAAGACCTGTTCCACACAAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CCA 90 bp GAAGGTGGCCTGTCCAGAAGCCTGTGGGACAGGGTAAAGGTCAGCTaGGTGACTAGGCTGTCCATCCTAGAGAGCAACTCTGGGTTCTAC +
Preference number: 1 (lower is better)
Translates to: EGGLSRSLWDRVKVS*VTRLSILESNSGFY
Trigger: GTAGAACCCAGAGTTGCTCTCTAGGATGGACAGCCTAGTCACCCAGCTGACCTTTACCCTGTCCCACAGGCTTCTGGACAGGCCACCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CCA 90 bp ATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGAAACCTaGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGC +
Preference number: 1 (lower is better)
Translates to: MPESIVASTLPVQET*TSPLQGPTFLSGQS
Trigger: GCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR TCA 90 bp AGCTGCAATGCTGACCTGGAATGCTCATGGCCAGGCCTCTGCTCCTaGCAGAATGGGAAACAAAGACTTGCTGGTAGGCAGCCACTGCAC +
Preference number: 1 (lower is better)
Translates to: SCNADLECSWPGLCS*QNGKQRLAGRQPLH
Trigger: GTGCAGTGGCTGCCTACCAGCAAGTCTTTGTTTCCCATTCTGTCAGGAGCAGAGGCCTGGCCATGAGCATTCCAGGTCAGCATTGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR TCA 90 bp ACCTCCAGTCCCTGCTCTAAACCCCCATGTAGTGGTACCGAACCATaGCCACCCCTGGCAAGAGCCTTCATGCACCTAGCAAGTAGTCAC +
Preference number: 1 (lower is better)
Translates to: TSSPCSKPPCSGTEP*PPLARAFMHLASSH
Trigger: GTGACTACTTGCTAGGTGCATGAAGGCTCTTGCCAGGGGTGGTCATGGTTCGGTACCACTACATGGGGGTTTAGAGCAGGGACTGGAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR GCA 90 bp TCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTaGAGGAAACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTT +
Preference number: 1 (lower is better)
Translates to: SGRPCQSPSLPPPYL*RKPGHHHFKALPSF
Trigger: AAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR GCA 90 bp TACTTCTCCATACTGAGCACCCCAGCCCATAGGATGATCAGCTGCTaGCGTCCTATGGAACTCAGGTGTGGCTCTGTGGCTTCCTTTGGC +
Preference number: 1 (lower is better)
Translates to: YFSILSTPAHRMISC*RPMELRCGSVASFG
Trigger: GCCAAAGGAAGCCACAGAGCCACACCTGAGTTCCATAGGACGGCAGCAGCTGATCATCCTATGGGCTGGGGTGCTCAGTATGGAGAAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CCA 90 bp ACTCAGGTGTGGCTCTGTGGCTTCCTTTGGCCACAGAAATGGAAGTaGGGTGACACACATTACTTGTGGCCTGCTGTGGCCTTTCCCCTG +
Preference number: 1 (lower is better)
Translates to: TQVWLCGFLWPQKWK*GDTHYLWPAVAFPL
Trigger: CAGGGGAAAGGCCACAGCAGGCCACAAGTAATGTGTGTCACCCCACTTCCATTTCTGTGGCCAAAGGAAGCCACAGAGCCACACCTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR TCA 90 bp GGCCAAGGAGCGAGGCCTCAGGAGAAACCAACCCTGCCCACACCTTaGTCTCAGGCTTCTAGCTCCAGAATCATGAGGAAATGTCTGTTG +
Preference number: 1 (lower is better)
Translates to: GQGARPQEKPTLPTP*SQASSSRIMRKCLL
Trigger: CAACAGACATTTCCTCATGATTCTGGAGCTAGAAGCCTGAGATCAAGGTGTGGGCAGGGTTGGTTTCTCCTGAGGCCTCGCTCCTTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR GCA 90 bp GGCAAGGGGCTTGCATCCCACCTTCCTGCATCCAAACCTTCCAGCTaGCCAGAACTGCTGGTAATCCCACAGGAAACATCATTCTTTGCC +
Preference number: 1 (lower is better)
Translates to: GKGLASHLPASKPSS*PELLVIPQETSFFA
Trigger: GGCAAAGAATGATGTTTCCTGTGGGATTACCAGCAGTTCTGGGCAGCTGGAAGGTTTGGATGCAGGAAGGTGGGATGCAAGCCCCTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR GCA 90 bp CCAGCAGGAAAGCAGCTTGGTCATCATCTGTCTGAAAGCAGGTGCTaGAGCAGCTGGCAACAAAGCCACTCTGAAAGGAGCTGTGTGCAC +
Preference number: 1 (lower is better)
Translates to: PAGKQLGHHLSESRC*SSWQQSHSERSCVH
Trigger: GTGCACACAGCTCCTTTCAGAGTGGCTTTGTTGCCAGCTGCTGCAGCACCTGCTTTCAGACAGATGATGACCAAGCTGCTTTCCTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR GCA 90 bp AGTGGGGTGACACACATTACTTGTGGCCTGCTGTGGCCTTTCCCCTaGCTCAGTGAGCATGGAGAAATATGTCCAGGTAGGCTGTCGTCA +
Preference number: 1 (lower is better)
Translates to: SGVTHITCGLLWPFP*LSEHGEICPGRLSS
Trigger: TGACGACAGCCTACCTGGACATATTTCTCCATGCTCACTGAGGCAGGGGAAAGGCCACAGCAGGCCACAAGTAATGTGTGTCACCCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR TCA 90 bp ATTGTGTACCAGGCCACAGAGCTGACTAAGACAGAGCCCCTGTGCTaGGGGTCACAGTCTGCCAGGAGGGAGATCCAAGTCATTTACACA +
Preference number: 1 (lower is better)
Translates to: IVYQATELTKTEPLC*GSQSARREIQVIYT
Trigger: TGTGTAAATGACTTGGATCTCCCTCCTGGCAGACTGTGACCCTCAGCACAGGGGCTCTGTCTTAGTCAGCTCTGTGGCCTGGTACACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR GCA 90 bp TTGTACTTCTCCATACTGAGCACCCCAGCCCATAGGATGATCAGCTaGTGCCGTCCTATGGAACTCAGGTGTGGCTCTGTGGCTTCCTTT +
Preference number: 1 (lower is better)
Translates to: LYFSILSTPAHRMIS*CRPMELRCGSVASF
Trigger: AAAGGAAGCCACAGAGCCACACCTGAGTTCCATAGGACGGCAGCAGCTGATCATCCTATGGGCTGGGGTGCTCAGTATGGAGAAGTACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CCA 90 bp CACAGAAATGGAAGTGGGGTGACACACATTACTTGTGGCCTGCTGTaGCCTTTCCCCTGCCTCAGTGAGCATGGAGAAATATGTCCAGGT +
Preference number: 1 (lower is better)
Translates to: HRNGSGVTHITCGLL*PFPCLSEHGEICPG
Trigger: ACCTGGACATATTTCTCCATGCTCACTGAGGCAGGGGAAAGGCCACAGCAGGCCACAAGTAATGTGTGTCACCCCACTTCCATTTCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CCA 90 bp TATGGAACTCAGGTGTGGCTCTGTGGCTTCCTTTGGCCACAGAAATaGAAGTGGGGTGACACACATTACTTGTGGCCTGCTGTGGCCTTT +
Preference number: 1 (lower is better)
Translates to: YGTQVWLCGFLWPQK*KWGDTHYLWPAVAF
Trigger: AAAGGCCACAGCAGGCCACAAGTAATGTGTGTCACCCCACTTCCATTTCTGTGGCCAAAGGAAGCCACAGAGCCACACCTGAGTTCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CCA 90 bp GGGAAAGATTTCTTAAGTGAGAAACAGCATCCCATACAGCACAACTaGGCACTGCCTACTCAACAGCCAAGGCTTGGCCATCCCCACTCC +
Preference number: 1 (lower is better)
Translates to: GKDFLSEKQHPIQHN*ALPTQQPRLGHPHS
Trigger: GGAGTGGGGATGGCCAAGCCTTGGCTGTTGAGTAGGCAGTGCCCAGTTGTGCTGTATGGGATGCTGTTTCTCACTTAAGAAATCTTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR GCA 90 bp CAGCTGCCCAGAACTGCTGGTAATCCCACAGGAAACATCATTCTTTaGCAAGATGCTATCCCACTCATCCCCCAGAATCAAAGTGGCCAC +
Preference number: 1 (lower is better)
Translates to: QLPRTAGNPTGNIIL*QDAIPLIPQNQSGH
Trigger: GTGGCCACTTTGATTCTGGGGGATGAGTGGGATAGCATCTTGGCAAAGAATGATGTTTCCTGTGGGATTACCAGCAGTTCTGGGCAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR TCA 90 bp ACCCCTCCCTTCTGCCGCAGTTACACTTACAGGTGGACTCAAGGTTaGATGTCAAAGGCAGAAAGTTACAACCTGGGAATACAGGATAAT +
Preference number: 1 (lower is better)
Translates to: TPPFCRSYTYRWTQG*MSKAESYNLGIQDN
Trigger: ATTATCCTGTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGTAAGTGTAACTGCGGCAGAAGGGAGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR TCA 90 bp GTCCTATCTTCAGGAAATAAAATCTCTGGGTATTTCCAAGGGAAGTaGAGGACTGACACCATGATTAGAAAGCAGAGCCAGCACCATGGC +
Preference number: 1 (lower is better)
Translates to: VLSSGNKISGYFQGK*RTDTMIRKQSQHHG
Trigger: GCCATGGTGCTGGCTCTGCTTTCTAATCATGGTGTCAGTCCTTCACTTCCCTTGGAAATACCCAGAGATTTTATTTCCTGAAGATAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CCA 90 bp CACCTAGCAAGTAGTCACAGCATGCATGTGCCTAGAATTGTTACGTaGTCAAATTATATTATTGTGTATTCCCACCAACAGTATGAGAAG +
Preference number: 1 (lower is better)
Translates to: HLASSHSMHVPRIVT*SNYIIVYSHQQYEK
Trigger: CTTCTCATACTGTTGGTGGGAATACACAATAATATAATTTGACCACGTAACAATTCTAGGCACATGCATGCTGTGACTACTTGCTAGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR TCA 90 bp GTAACATTGAAATCTTTAATCTGGAATATGTACTGGCATAAAGAGTaGGGCACATACATGGCTTTACTATTTTCCAGAGGGCCAACTGCT +
Preference number: 1 (lower is better)
Translates to: VTLKSLIWNMYWHKE*GTYMALLFSRGPTA
Trigger: AGCAGTTGGCCCTCTGGAAAATAGTAAAGCCATGTATGTGCCTCACTCTTTATGCCAGTACATATTCCAGATTAAAGATTTCAATGTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp GGAGGGGAGGAGGCAAGGCCAACCTCCAGTCCCTGCTCTAAACCCCCATGTAGTAGGCTCTGCAGCTCCTaGGCACCCTGCCTTCGGGTC +
Preference number: 2 (lower is better)
Translates to: GGEEARPTSSPCSKPPCSRLCSS*APCLRV
Trigger: GACCCGAAGGCAGGGTGCTCAGGAGCTGCAGAGCCT...ACTACATGGGGGTTTAGAGCAGGGACTGGAGGTTGGCCTTGCCTCCTCCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp CAAAACGACCCCCTCGTGGGAGCAGGCCTGGGTGAGACGGCACTCCCAGAAGACCCCAGCTATGGGGTCTaGAGTCATCTGGGGACACCA +
Preference number: 2 (lower is better)
Translates to: QNDPLVGAGLGETALPEDPSYGV*SHLGTP
Trigger: TGGTGTCCCCAGATGACTTCAGACCCCATAGCTGGG...GTCTTCTGGGAGTGCCGTCTCACCCAGGCCTGCTCCCACGAGGGGGTCGTTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp GGCAAGGGGCTTGCATCCCACCTTCCTGCATCCAAACCTTCCAGCTGCCCAGAAGGGAGCAGGCCTGGGTaGGACGGCACTCCCAGAAGA +
Preference number: 2 (lower is better)
Translates to: GKGLASHLPASKPSSCPEGSRPG*DGTPRR
Trigger: TCTTCTGGGAGTGCCGTCTCACCCAGGCCTGCTCCC...TTCTGGGCAGCTGGAAGGTTTGGATGCAGGAAGGTGGGATGCAAGCCCCTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp CTGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGTGCCAGACCCACAGGTaGGCCAGGCCACAGTGCACT +
Preference number: 2 (lower is better)
Translates to: LSGRPCQSPSLPPPYLCRCQTHR*ARPQCT
Trigger: AGTGCACTGTGGCCTGGCTCACCTGTGGGTCTGGCA...CCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp CAAAACGACCCCCTCGTGGGAGCAGGCCTGGGTGAGACGGCACTCCCAGAAGACCCACTCTGCTCTGACTaGGGACTATGGGGCGCTCAA +
Preference number: 2 (lower is better)
Translates to: QNDPLVGAGLGETALPEDPLCSD*GLWGAQ
Trigger: TTGAGCGCCCCATAGTCCCCAGTCAGAGCAGAGTGG...GTCTTCTGGGAGTGCCGTCTCACCCAGGCCTGCTCCCACGAGGGGGTCGTTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp GGAGGGGAGGAGGCAAGGCCAACCTCCAGTCCCTGCTCTAAACCCCCATGTAGTGGGGCCTCACAGCTCTaGACTGCTGCCTGGTCCTCA +
Preference number: 2 (lower is better)
Translates to: GGEEARPTSSPCSKPPCSGASQL*TAAWSS
Trigger: TGAGGACCAGGCAGCAGTCCAGAGCTGTGAGGCCCC...ACTACATGGGGGTTTAGAGCAGGGACTGGAGGTTGGCCTTGCCTCCTCCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp CTGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGCCTGGCACAGAAGCATaGGGCTGGGCCAGGACATCC +
Preference number: 2 (lower is better)
Translates to: LSGRPCQSPSLPPPYLCRPGTEA*GWARTS
Trigger: GGATGTCCTGGCCCAGCCCCATGCTTCTGTGCCAGG...CCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp GGAGGGGAGGAGGCAAGGCCAACCTCCAGTCCCTGCTCTAAACCCCCATGTAGTCCTGGCACAGAAGCATaGGGCTGGGCCAGGACATCC +
Preference number: 2 (lower is better)
Translates to: GGEEARPTSSPCSKPPCSPGTEA*GWARTS
Trigger: GGATGTCCTGGCCCAGCCCCATGCTTCTGTGCCAGG...ACTACATGGGGGTTTAGAGCAGGGACTGGAGGTTGGCCTTGCCTCCTCCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp TGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGAGACACCACTCTGCTCTaGCTGGGGACTATGGGGCGC +
Preference number: 2 (lower is better)
Translates to: CLEGHARVHRCLHPTCAGDTTLL*LGTMGR
Trigger: GCGCCCCATAGTCCCCAGTCAGAGCAGAGTGGTGTC...TCCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp GGAGGGGAGGAGGCAAGGCCAACCTCCAGTCCCTGCTCTAAACCCCCATGTAGTTGGAGTGCAATGGCGTaGTCTCGGCTCACCACACCC +
Preference number: 2 (lower is better)
Translates to: GGEEARPTSSPCSKPPCSWSAMA*SRLTTP
Trigger: GGGTGTGGTGAGCCGAGATCACGCCATTGCACTCCA...ACTACATGGGGGTTTAGAGCAGGGACTGGAGGTTGGCCTTGCCTCCTCCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CAA 90 bp CTCCCATCCTCAGCAGCACCAACCAGCCCCACGCTGGGTGGCTGCTaGTACTTCTCCATACTGAGCACCCCAGCCCATAGGATGATCAGC +
Preference number: 2 (lower is better)
Translates to: LPSSAAPTSPTLGGC*YFSILSTPAHRMIS
Trigger: GCTGATCATCCTATGGGCTGGGGTGCTCAGTATGGAGAAGTACAAGCAGCCACCCAGCGTGGGGCTGGTTGGTGCTGCTGAGGATGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp GGAGGGGAGGAGGCAAGGCCAACCTCCAGTCCCTGCTCTAAACCCCCATGTAGTCCACAGCTGCAATGCTaGCCTGGAATGCTCATGGCC +
Preference number: 2 (lower is better)
Translates to: GGEEARPTSSPCSKPPCSPQLQC*PGMLMA
Trigger: GGCCATGAGCATTCCAGGTCAGCATTGCAGCTGTGG...ACTACATGGGGGTTTAGAGCAGGGACTGGAGGTTGGCCTTGCCTCCTCCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp CTGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGCATCAGGGAGCAGTCTaGCCCAACCCACAAAAGGGG +
Preference number: 2 (lower is better)
Translates to: LSGRPCQSPSLPPPYLCRHQGAV*PNPQKG
Trigger: CCCCTTTTGTGGGTTGGGTCAGACTGCTCCCTGATG...CCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp TGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGAGCCTGGCAAGGGGCTTaGATCCCACCTTCCTGCATC +
Preference number: 2 (lower is better)
Translates to: CLEGHARVHRCLHPTCAGAWQGA*IPPSCI
Trigger: GATGCAGGAAGGTGGGATGCAAGCCCCTTGCCAGGC...TCCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp GGAGGGGAGGAGGCAAGGCCAACCTCCAGTCCCTGCTCTAAACCCCCATGTAGTGCCAGAGTCCATCGTTaGCTCCACCCTACCTGTGCA +
Preference number: 2 (lower is better)
Translates to: GGEEARPTSSPCSKPPCSARVHR*LHPTCA
Trigger: TGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGC...ACTACATGGGGGTTTAGAGCAGGGACTGGAGGTTGGCCTTGCCTCCTCCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp CAAAACGACCCCCTCGTGGGAGCAGGCCTGGGTGAGACGGCACTCCCAGAAGACCATCTTGCCCAGCTATaGGGTCTGAAGTCATCTGGG +
Preference number: 2 (lower is better)
Translates to: QNDPLVGAGLGETALPEDHLAQL*GLKSSG
Trigger: CCCAGATGACTTCAGACCCCATAGCTGGGCAAGATG...GTCTTCTGGGAGTGCCGTCTCACCCAGGCCTGCTCCCACGAGGGGGTCGTTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp CCTAGGTGGATGCTGCATGACTGGCCCTCAGACACACGGCAGACCATAACTCACCCCCCAGGAGCTGCCTaGGTCCCAAGGGCACAAAAG +
Preference number: 2 (lower is better)
Translates to: PRWMLHDWPSDTRQTITHPPGAA*VPRAQK
Trigger: CTTTTGTGCCCTTGGGACCCAGGCAGCTCCTGGGGG...GTGAGTTATGGTCTGCCGTGTGTCTGAGGGCCAGTCATGCAGCATCCACCTAGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp GGCAAGGGGCTTGCATCCCACCTTCCTGCATCCAAACCTTCCAGCTGCCCAGAACCCAGCTATGGGGTCTaGAGTCATCTGGGGACACCA +
Preference number: 2 (lower is better)
Translates to: GKGLASHLPASKPSSCPEPSYGV*SHLGTP
Trigger: TGGTGTCCCCAGATGACTTCAGACCCCATAGCTGGG...TTCTGGGCAGCTGGAAGGTTTGGATGCAGGAAGGTGGGATGCAAGCCCCTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp ACACACTGCACACACTGGGCGGCTGTACCTGCCTATCCTGTGGTAAACTTGGCTCATGCGAGTGCGGAGTaGGCAGGGGATGGCAGCACA +
Preference number: 2 (lower is better)
Translates to: THCTHWAAVPAYPVVNLAHASAE*AGDGST
Trigger: TGTGCTGCCATCCCCTGCTCACTCCGCACTCGCATG...AGCCAAGTTTACCACAGGATAGGCAGGTACAGCCGCCCAGTGTGTGCAGTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp TCAAGGATGACAGCAGACCCCTCCCTTCTGCCGCAGTTACACTTACAGGTGGACTGCCAGACCCACAGGTaGGCCAGGCCACAGTGCACT +
Preference number: 2 (lower is better)
Translates to: SRMTADPSLLPQLHLQVDCQTHR*ARPQCT
Trigger: AGTGCACTGTGGCCTGGCTCACCTGTGGGTCTGGCA...GTCCACCTGTAAGTGTAACTGCGGCAGAAGGGAGGGGTCTGCTGTCATCCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp CCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCAGCCTGGCAAGGGGCTTaGATCCCACCTTCCTGCATC +
Preference number: 2 (lower is better)
Translates to: PGHHHFKALPSFLGRAQPAWQGA*IPPSCI
Trigger: GATGCAGGAAGGTGGGATGCAAGCCCCTTGCCAGGC...TGGTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp CCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCACGCAATGCATGCGAGTaGGGAGTGAGCAGGGGATGG +
Preference number: 2 (lower is better)
Translates to: PGHHHFKALPSFLGRAQPRNACE*GVSRGW
Trigger: CCATCCCCTGCTCACTCCGCACTCGCATGCATTGCG...TGGTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp CCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCAGCCTGCCTAGGTGGATaGTGCATGACTGGCCCTCAG +
Preference number: 2 (lower is better)
Translates to: PGHHHFKALPSFLGRAQPACLGG*CMTGPQ
Trigger: CTGAGGGCCAGTCATGCAGCATCCACCTAGGCAGGC...TGGTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp AGGGGCTCTGCTCATCACAGGCTATCAAGGATGACAGCAGACCCCTCCCTTCTGAAAACGACCCCCTCGTaGGAGCAGGCCTGGGTGAGA +
Preference number: 2 (lower is better)
Translates to: RGSAHHRLSRMTADPSLLKTTPS*EQAWVR
Trigger: TCTCACCCAGGCCTGCTCCCACGAGGGGGTCGTTTT...CAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp CCTAGGTGGATGCTGCATGACTGGCCCTCAGACACACGGCAGACCATAACTCACCCAACAGGGCAGACGTaGCAGACCCAGTTCAGTCCC +
Preference number: 2 (lower is better)
Translates to: PRWMLHDWPSDTRQTITHPTGQT*QTQFSP
Trigger: GGGACTGAACTGGGTCTGCCACGTCTGCCCTGTTGG...GTGAGTTATGGTCTGCCGTGTGTCTGAGGGCCAGTCATGCAGCATCCACCTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp TGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGAGCTGCAATGCTGACCTaGAATGCTCATGGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: CLEGHARVHRCLHPTCAGAAMLT*NAHGQA
Trigger: GGCCTGGCCATGAGCATTCCAGGTCAGCATTGCAGC...TCCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp GGAGGGGAGGAGGCAAGGCCAACCTCCAGTCCCTGCTCTAAACCCCCATGTAGTTTCATTCCATTCCTCTaGGCCTGGGGCCTCACAGCT +
Preference number: 2 (lower is better)
Translates to: GGEEARPTSSPCSKPPCSFIPFL*AWGLTA
Trigger: AGCTGTGAGGCCCCAGGCCCAGAGGAATGGAATGAA...ACTACATGGGGGTTTAGAGCAGGGACTGGAGGTTGGCCTTGCCTCCTCCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp GGAGGGGAGGAGGCAAGGCCAACCTCCAGTCCCTGCTCTAAACCCCCATGTAGTGTCCAAGCACCAGAGTaGGCACACACTGCACACACT +
Preference number: 2 (lower is better)
Translates to: GGEEARPTSSPCSKPPCSVQAPE*AHTAHT
Trigger: AGTGTGTGCAGTGTGTGCCCACTCTGGTGCTTGGAC...ACTACATGGGGGTTTAGAGCAGGGACTGGAGGTTGGCCTTGCCTCCTCCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp CCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCAACAGAAGCATGGGGCTaGGCCAGGACATCCAGGGAC +
Preference number: 2 (lower is better)
Translates to: PGHHHFKALPSFLGRAQPTEAWG*ARTSRD
Trigger: GTCCCTGGATGTCCTGGCCCAGCCCCATGCTTCTGT...TGGTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp CCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCAGGGAGATGGGGAAGGTaGCCTGTCCAGAAGCCTGTG +
Preference number: 2 (lower is better)
Translates to: PGHHHFKALPSFLGRAQPGRWGR*PVQKPV
Trigger: CACAGGCTTCTGGACAGGCCACCTTCCCCATCTCCC...TGGTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp AACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCCCCCAGGAGCTGCCTaGGTCCCAAGGGCACAAAAG +
Preference number: 2 (lower is better)
Translates to: NLDITTSRPYLPFWAEPNPPGAA*VPRAQK
Trigger: CTTTTGTGCCCTTGGGACCCAGGCAGCTCCTGGGGG...GTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp GGAGGGGAGGAGGCAAGGCCAACCTCCAGTCCCTGCTCTAAACCCCCATGTAGTGCAACAAAGCCACTCTaGAAGGAGCTGTGTGCACTG +
Preference number: 2 (lower is better)
Translates to: GGEEARPTSSPCSKPPCSATKPL*KELCAL
Trigger: CAGTGCACACAGCTCCTTTCAGAGTGGCTTTGTTGC...ACTACATGGGGGTTTAGAGCAGGGACTGGAGGTTGGCCTTGCCTCCTCCCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp GGAGGGGAGGAGGCAAGGCCAACCTCCAGTCCCTGCTCTAAACCCCCATGTAGTTGGTCATCATCTGTCTaGAAGCAGGTGCTGCAGCAG +
Preference number: 2 (lower is better)
Translates to: GGEEARPTSSPCSKPPCSWSSSV*KQVLQQ
Trigger: CTGCTGCAGCACCTGCTTTCAGACAGATGATGACCA...ACTACATGGGGGTTTAGAGCAGGGACTGGAGGTTGGCCTTGCCTCCTCCCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp TCAAGGATGACAGCAGACCCCTCCCTTCTGCCGCAGTTACACTTACAGGTGGACACCATGGCCCGTCCCTaGGCATGTCCAGCAAACCCT +
Preference number: 2 (lower is better)
Translates to: SRMTADPSLLPQLHLQVDTMARP*ACPANP
Trigger: AGGGTTTGCTGGACATGCTCAGGGACGGGCCATGGT...GTCCACCTGTAAGTGTAACTGCGGCAGAAGGGAGGGGTCTGCTGTCATCCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp CTGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGTGCATCCCACCTTCCTaGATCCAAACCTTCCAGCTG +
Preference number: 2 (lower is better)
Translates to: LSGRPCQSPSLPPPYLCRCIPPS*IQTFQL
Trigger: CAGCTGGAAGGTTTGGATGCAGGAAGGTGGGATGCA...CCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp CCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCAAGAGTGGGCACACACTaGACACACTGGGCGGCTGTA +
Preference number: 2 (lower is better)
Translates to: PGHHHFKALPSFLGRAQPRVGTH*THWAAV
Trigger: TACAGCCGCCCAGTGTGTGCAGTGTGTGCCCACTCT...TGGTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp CCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCATGGAGTTGGGGGAGCTaGTTCTGCTCAGCGCAGAGT +
Preference number: 2 (lower is better)
Translates to: PGHHHFKALPSFLGRAQPWSWGS*FCSAQS
Trigger: ACTCTGCGCTGAGCAGAACCAGCTCCCCCAACTCCA...TGGTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp CCTAGGTGGATGCTGCATGACTGGCCCTCAGACACACGGCAGACCATAACTCACGAGGTCAAGCTCTGCTaGAGTTGGGGGAGCTGGTTC +
Preference number: 2 (lower is better)
Translates to: PRWMLHDWPSDTRQTITHEVKLC*SWGSWF
Trigger: GAACCAGCTCCCCCAACTCCAGCAGAGCTTGACCTC...GTGAGTTATGGTCTGCCGTGTGTCTGAGGGCCAGTCATGCAGCATCCACCTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp CTGTGCAGGAAACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCACAGAAGCATGGGGCTaGGCCAGGACATCCAGGGAC +
Preference number: 2 (lower is better)
Translates to: LCRKPGHHHFKALPSFLGTEAWG*ARTSRD
Trigger: GTCCCTGGATGTCCTGGCCCAGCCCCATGCTTCTGT...GCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp TCAAGGATGACAGCAGACCCCTCCCTTCTGCCGCAGTTACACTTACAGGTGGACAGGGCAGCTGTGACCTaGCACAGAAGCATGGGGCTG +
Preference number: 2 (lower is better)
Translates to: SRMTADPSLLPQLHLQVDRAAVT*HRSMGL
Trigger: CAGCCCCATGCTTCTGTGCCAGGTCACAGCTGCCCT...GTCCACCTGTAAGTGTAACTGCGGCAGAAGGGAGGGGTCTGCTGTCATCCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp GGAGGGGAGGAGGCAAGGCCAACCTCCAGTCCCTGCTCTAAACCCCCATGTAGTCCCTACCTTCCTTTCTaGGCAGAGCCCAACCACAAT +
Preference number: 2 (lower is better)
Translates to: GGEEARPTSSPCSKPPCSPYLPF*AEPNHN
Trigger: ATTGTGGTTGGGCTCTGCCCAGAAAGGAAGGTAGGG...ACTACATGGGGGTTTAGAGCAGGGACTGGAGGTTGGCCTTGCCTCCTCCCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp AGGGGCTCTGCTCATCACAGGCTATCAAGGATGACAGCAGACCCCTCCCTTCTGGCTGCTGCCGTCCTATaGAACTCAGGTGTGGCTCTG +
Preference number: 2 (lower is better)
Translates to: RGSAHHRLSRMTADPSLLAAAVL*NSGVAL
Trigger: CAGAGCCACACCTGAGTTCCATAGGACGGCAGCAGC...CAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CAA 90 bp AAACAACCCAGGGGGAATGCCTCCTTCCCCCAGCAGGAAAGCAGCTaGGTCATCATCTGTCTGAAAGCAGGTGCTGCAGCAGCTGGCAAC +
Preference number: 2 (lower is better)
Translates to: KQPRGNASFPQQESS*VIICLKAGAAAAGN
Trigger: GTTGCCAGCTGCTGCAGCACCTGCTTTCAGACAGATGATGACCAAGCTGCTTTCCTGCTGGGGGAAGGAGGCATTCCCCCTGGGTTGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp CCTAGGTGGATGCTGCATGACTGGCCCTCAGACACACGGCAGACCATAACTCACCAGGCCACTTCATCATaGGGGGCAGCATTGTTCCCA +
Preference number: 2 (lower is better)
Translates to: PRWMLHDWPSDTRQTITHQATSS*GAALFP
Trigger: TGGGAACAATGCTGCCCCTCATGATGAAGTGGCCTG...GTGAGTTATGGTCTGCCGTGTGTCTGAGGGCCAGTCATGCAGCATCCACCTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp TCAAGGATGACAGCAGACCCCTCCCTTCTGCCGCAGTTACACTTACAGGTGGACCCACAGCTGCAATGCTaGCCTGGAATGCTCATGGCC +
Preference number: 2 (lower is better)
Translates to: SRMTADPSLLPQLHLQVDPQLQC*PGMLMA
Trigger: GGCCATGAGCATTCCAGGTCAGCATTGCAGCTGTGG...GTCCACCTGTAAGTGTAACTGCGGCAGAAGGGAGGGGTCTGCTGTCATCCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp CTGTGCAGGAAACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCCATCAGGGAGCAGTCTaGCCCAACCCACAAAAGGGG +
Preference number: 2 (lower is better)
Translates to: LCRKPGHHHFKALPSFLGHQGAV*PNPQKG
Trigger: CCCCTTTTGTGGGTTGGGTCAGACTGCTCCCTGATG...GCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp TCAAGGATGACAGCAGACCCCTCCCTTCTGCCGCAGTTACACTTACAGGTGGACCTGGGGACACCACTCTaGTCTGACTGGGGACTATGG +
Preference number: 2 (lower is better)
Translates to: SRMTADPSLLPQLHLQVDLGTPL*SDWGLW
Trigger: CCATAGTCCCCAGTCAGAGCAGAGTGGTGTCCCCAG...GTCCACCTGTAAGTGTAACTGCGGCAGAAGGGAGGGGTCTGCTGTCATCCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp CTGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGTCCAAACCTTCCAGCTaGCCAGAACTGCTGGTAATC +
Preference number: 2 (lower is better)
Translates to: LSGRPCQSPSLPPPYLCRSKPSS*PELLVI
Trigger: GATTACCAGCAGTTCTGGGCAGCTGGAAGGTTTGGA...CCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp TCAAGGATGACAGCAGACCCCTCCCTTCTGCCGCAGTTACACTTACAGGTGGACCACACAAAGGGCGAATaGCTGCAGCTGAGCCTGGCA +
Preference number: 2 (lower is better)
Translates to: SRMTADPSLLPQLHLQVDHTKGE*LQLSLA
Trigger: TGCCAGGCTCAGCTGCAGGCATTCGCCCTTTGTGTG...GTCCACCTGTAAGTGTAACTGCGGCAGAAGGGAGGGGTCTGCTGTCATCCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp TGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGAGCCAGAAACCACAGCTaGAATGCTGACCTGGAATGC +
Preference number: 2 (lower is better)
Translates to: CLEGHARVHRCLHPTCAGARNHS*NADLEC
Trigger: GCATTCCAGGTCAGCATTGCAGCTGTGGTTTCTGGC...TCCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp AGGGGCTCTGCTCATCACAGGCTATCAAGGATGACAGCAGACCCCTCCCTTCTGACAGCTCTGGACTGCTaGCTGGTCCTCACTTCACCT +
Preference number: 2 (lower is better)
Translates to: RGSAHHRLSRMTADPSLLTALDC*LVLTSP
Trigger: AGGTGAAGTGAGGACCAGGCAGCAGTCCAGAGCTGT...CAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp AGGGGCTCTGCTCATCACAGGCTATCAAGGATGACAGCAGACCCCTCCCTTCTGTTGTCCAGGCTGGAGTaGAATGGCGTGATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: RGSAHHRLSRMTADPSLLLSRLE*NGVISA
Trigger: AGCCGAGATCACGCCATTGCACTCCAGCCTGGACAA...CAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp CCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCATTGTCCAGGCTGGAGTaGAATGGCGTGATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: PGHHHFKALPSFLGRAQPLSRLE*NGVISA
Trigger: AGCCGAGATCACGCCATTGCACTCCAGCCTGGACAA...TGGTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp AGGGGCTCTGCTCATCACAGGCTATCAAGGATGACAGCAGACCCCTCCCTTCTGCCTCCACCCTACCTGTaGAGGAAACCTGGACATCAC +
Preference number: 2 (lower is better)
Translates to: RGSAHHRLSRMTADPSLLPPPYL*RKPGHH
Trigger: GTGATGTCCAGGTTTCCTGCACAGGTAGGGTGGAGG...CAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp AACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACTGGAGTTGGGGGAGCTaGTTCTGCTCAGCGCAGAGT +
Preference number: 2 (lower is better)
Translates to: NLDITTSRPYLPFWAEPNWSWGS*FCSAQS
Trigger: ACTCTGCGCTGAGCAGAACCAGCTCCCCCAACTCCA...GTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp ACACACTGCACACACTGGGCGGCTGTACCTGCCTATCCTGTGGTAAACTTGGCTTGGAGTTGGGGGAGCTaGTTCTGCTCAGCGCAGAGT +
Preference number: 2 (lower is better)
Translates to: THCTHWAAVPAYPVVNLAWSWGS*FCSAQS
Trigger: ACTCTGCGCTGAGCAGAACCAGCTCCCCCAACTCCA...AGCCAAGTTTACCACAGGATAGGCAGGTACAGCCGCCCAGTGTGTGCAGTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp CTGTGCAGGAAACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCCCCCCAGAATCAAAGTaGCCACTTCCTCCAGGCAGC +
Preference number: 2 (lower is better)
Translates to: LCRKPGHHHFKALPSFLGPPESK*PLPPGS
Trigger: GCTGCCTGGAGGAAGTGGCCACTTTGATTCTGGGGG...GCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp TCAAGGATGACAGCAGACCCCTCCCTTCTGCCGCAGTTACACTTACAGGTGGACGCTGCAATGCTGACCTaGAATGCTCATGGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: SRMTADPSLLPQLHLQVDAAMLT*NAHGQA
Trigger: GGCCTGGCCATGAGCATTCCAGGTCAGCATTGCAGC...GTCCACCTGTAAGTGTAACTGCGGCAGAAGGGAGGGGTCTGCTGTCATCCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp TGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGAAGGGTAAAGGTCAGCTaGGTGACTAGGCTGTCCATC +
Preference number: 2 (lower is better)
Translates to: CLEGHARVHRCLHPTCAGRVKVS*VTRLSI
Trigger: GATGGACAGCCTAGTCACCCAGCTGACCTTTACCCT...TCCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp AGGGGCTCTGCTCATCACAGGCTATCAAGGATGACAGCAGACCCCTCCCTTCTGTCCACTAAAGGGAGATaGGGAAGGTGGCCTGTCCAG +
Preference number: 2 (lower is better)
Translates to: RGSAHHRLSRMTADPSLLSTKGR*GRWPVQ
Trigger: CTGGACAGGCCACCTTCCCCATCTCCCTTTAGTGGA...CAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp AGGGGCTCTGCTCATCACAGGCTATCAAGGATGACAGCAGACCCCTCCCTTCTGGGGTCTGCCAGTGTGTaGGGGCCAGAAGAGAAAAAC +
Preference number: 2 (lower is better)
Translates to: RGSAHHRLSRMTADPSLLGSASV*GPEEKN
Trigger: GTTTTTCTCTTCTGGCCCCCACACACTGGCAGACCC...CAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp TCAAGGATGACAGCAGACCCCTCCCTTCTGCCGCAGTTACACTTACAGGTGGACTATGTTGCCCTGGGATaGATGCAGGCCCCTCCCATC +
Preference number: 2 (lower is better)
Translates to: SRMTADPSLLPQLHLQVDYVALG*MQAPPI
Trigger: GATGGGAGGGGCCTGCATCCATCCCAGGGCAACATA...GTCCACCTGTAAGTGTAACTGCGGCAGAAGGGAGGGGTCTGCTGTCATCCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp CTGTGCAGGAAACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCCAGGCCACTTCATCATaGGGGGCAGCATTGTTCCCA +
Preference number: 2 (lower is better)
Translates to: LCRKPGHHHFKALPSFLGQATSS*GAALFP
Trigger: TGGGAACAATGCTGCCCCTCATGATGAAGTGGCCTG...GCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp CGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCAAGTGGGAGCAGGCCTGGGTaGGACGGCACTCCCAGAAGA +
Preference number: 2 (lower is better)
Translates to: RGHRCGQNYVPSIFLCSSGSRPG*DGTPRR
Trigger: TCTTCTGGGAGTGCCGTCTCACCCAGGCCTGCTCCC...ACTTGAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp GGAGGGGAGGAGGCAAGGCCAACCTCCAGTCCCTGCTCTAAACCCCCATGTAGTCTATCTGCTGAGAGTTaGTCTACAAAACGACCCCCT +
Preference number: 2 (lower is better)
Translates to: GGEEARPTSSPCSKPPCSLSAES*STKRPP
Trigger: AGGGGGTCGTTTTGTAGATCAACTCTCAGCAGATAG...ACTACATGGGGGTTTAGAGCAGGGACTGGAGGTTGGCCTTGCCTCCTCCCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp AGGGGCTCTGCTCATCACAGGCTATCAAGGATGACAGCAGACCCCTCCCTTCTGGCAACAAAGCCACTCTaGAAGGAGCTGTGTGCACTG +
Preference number: 2 (lower is better)
Translates to: RGSAHHRLSRMTADPSLLATKPL*KELCAL
Trigger: CAGTGCACACAGCTCCTTTCAGAGTGGCTTTGTTGC...CAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp AGGGGCTCTGCTCATCACAGGCTATCAAGGATGACAGCAGACCCCTCCCTTCTGTGGTCATCATCTGTCTaGAAGCAGGTGCTGCAGCAG +
Preference number: 2 (lower is better)
Translates to: RGSAHHRLSRMTADPSLLWSSSV*KQVLQQ
Trigger: CTGCTGCAGCACCTGCTTTCAGACAGATGATGACCA...CAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp GGAGGGGAGGAGGCAAGGCCAACCTCCAGTCCCTGCTCTAAACCCCCATGTAGTAAAACAAGCGCATCTTaGCCAGCTATGGGGTCTGAA +
Preference number: 2 (lower is better)
Translates to: GGEEARPTSSPCSKPPCSKTSAS*PAMGSE
Trigger: TTCAGACCCCATAGCTGGGCAAGATGCGCTTGTTTT...ACTACATGGGGGTTTAGAGCAGGGACTGGAGGTTGGCCTTGCCTCCTCCCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp AACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCTGAGGGTCACAGTCTaGCAGGAGGGAGATCCAAGT +
Preference number: 2 (lower is better)
Translates to: NLDITTSRPYLPFWAEPNLRVTV*QEGDPS
Trigger: ACTTGGATCTCCCTCCTGGCAGACTGTGACCCTCAG...GTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp CTGTGCAGGAAACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCCTGGTAGGCAGCCACTaGACCACCTCAGCCAGTAAT +
Preference number: 2 (lower is better)
Translates to: LCRKPGHHHFKALPSFLGLVGSH*TTSASN
Trigger: ATTACTGGCTGAGGTGGTGCAGTGGCTGCCTACCAG...GCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp ACACACTGCACACACTGGGCGGCTGTACCTGCCTATCCTGTGGTAAACTTGGCTCTGGTAGGCAGCCACTaGACCACCTCAGCCAGTAAT +
Preference number: 2 (lower is better)
Translates to: THCTHWAAVPAYPVVNLALVGSH*TTSASN
Trigger: ATTACTGGCTGAGGTGGTGCAGTGGCTGCCTACCAG...AGCCAAGTTTACCACAGGATAGGCAGGTACAGCCGCCCAGTGTGTGCAGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp AGGGGCTCTGCTCATCACAGGCTATCAAGGATGACAGCAGACCCCTCCCTTCTGGCCAGAAACCACAGCTaGAATGCTGACCTGGAATGC +
Preference number: 2 (lower is better)
Translates to: RGSAHHRLSRMTADPSLLARNHS*NADLEC
Trigger: GCATTCCAGGTCAGCATTGCAGCTGTGGTTTCTGGC...CAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp TCAAGGATGACAGCAGACCCCTCCCTTCTGCCGCAGTTACACTTACAGGTGGACGCTCACCACACCCTCTaGCTCCTGGGTTCAAGCAAT +
Preference number: 2 (lower is better)
Translates to: SRMTADPSLLPQLHLQVDAHHTL*LLGSSN
Trigger: ATTGCTTGAACCCAGGAGGCAGAGGGTGTGGTGAGC...GTCCACCTGTAAGTGTAACTGCGGCAGAAGGGAGGGGTCTGCTGTCATCCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp AGGGGCTCTGCTCATCACAGGCTATCAAGGATGACAGCAGACCCCTCCCTTCTGCCAGCTCACTTGCTTTaGTACCAGGGCTATACCTGC +
Preference number: 2 (lower is better)
Translates to: RGSAHHRLSRMTADPSLLPAHLL*YQGYTC
Trigger: GCAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCTGG...CAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp AACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACTGCCTAGGTGGATGCTaGATGACTGGCCCTCAGACA +
Preference number: 2 (lower is better)
Translates to: NLDITTSRPYLPFWAEPNCLGGC*MTGPQT
Trigger: TGTCTGAGGGCCAGTCATGCAGCATCCACCTAGGCA...GTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp CCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCAAAGGACTCTCAAGCCTaGCTAGGTGGATGCTGCATG +
Preference number: 2 (lower is better)
Translates to: PGHHHFKALPSFLGRAQPKDSQA*LGGCCM
Trigger: CATGCAGCATCCACCTAGGCAGGCTTGAGAGTCCTT...TGGTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp AGGGGCTCTGCTCATCACAGGCTATCAAGGATGACAGCAGACCCCTCCCTTCTGAAGGACTCTCAAGCCTaGCTAGGTGGATGCTGCATG +
Preference number: 2 (lower is better)
Translates to: RGSAHHRLSRMTADPSLLKDSQA*LGGCCM
Trigger: CATGCAGCATCCACCTAGGCAGGCTTGAGAGTCCTT...CAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp CCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCACATCTTGCCCAGCTATaGGGTCTGAAGTCATCTGGG +
Preference number: 2 (lower is better)
Translates to: PGHHHFKALPSFLGRAQPHLAQL*GLKSSG
Trigger: CCCAGATGACTTCAGACCCCATAGCTGGGCAAGATG...TGGTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp GAAAACCCCTCCTTGTGTGGAACAGGTCTTTCTTCATTCCATTCCTCTGGGCCTGGGGCCTCACAGCTCTaGACTGCTGCCTGGTCCTCA +
Preference number: 2 (lower is better)
Translates to: ENPSLCGTGLSSFHSSGPGASQL*TAAWSS
Trigger: TGAGGACCAGGCAGCAGTCCAGAGCTGTGAGGCCCC...AGGCCCAGAGGAATGGAATGAAGAAAGACCTGTTCCACACAAGGAGGGGTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp TGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGAAAAAACCAGGTCACCTaGACTCTCCCAAGGACTCTC +
Preference number: 2 (lower is better)
Translates to: CLEGHARVHRCLHPTCAGKNQVT*TLPRTL
Trigger: GAGAGTCCTTGGGAGAGTCCAGGTGACCTGGTTTTT...TCCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CAA 90 bp GGCTCCAGGAGCTTCCAAGCTCAGCTTCCACTAGAAAACCCCTCCTaGTGTGGAACAGGTCTTTCTTCATTCCATTCCTCTGGGCCTGGG +
Preference number: 2 (lower is better)
Translates to: GSRSFQAQLPLENPS*CGTGLSSFHSSGPG
Trigger: CCCAGGCCCAGAGGAATGGAATGAAGAAAGACCTGTTCCACACAAGGAGGGGTTTTCTAGTGGAAGCTGAGCTTGGAAGCTCCTGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp GGCAAGGGGCTTGCATCCCACCTTCCTGCATCCAAACCTTCCAGCTGCCCAGAAAAAACAAGCGCATCTTaGCCAGCTATGGGGTCTGAA +
Preference number: 2 (lower is better)
Translates to: GKGLASHLPASKPSSCPEKTSAS*PAMGSE
Trigger: TTCAGACCCCATAGCTGGGCAAGATGCGCTTGTTTT...TTCTGGGCAGCTGGAAGGTTTGGATGCAGGAAGGTGGGATGCAAGCCCCTTGCC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp GAAAACCCCTCCTTGTGTGGAACAGGTCTTTCTTCATTCCATTCCTCTGGGCCTGAAGACGGGCAGGGATaGAGCAGAGAGCCAGCAGCA +
Preference number: 2 (lower is better)
Translates to: ENPSLCGTGLSSFHSSGPEDGQG*SREPAA
Trigger: TGCTGCTGGCTCTCTGCTGCATCCCTGCCCGTCTTC...AGGCCCAGAGGAATGGAATGAAGAAAGACCTGTTCCACACAAGGAGGGGTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp CTGTGCAGGAAACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCGCCAGAAACCACAGCTaGAATGCTGACCTGGAATGC +
Preference number: 2 (lower is better)
Translates to: LCRKPGHHHFKALPSFLGARNHS*NADLEC
Trigger: GCATTCCAGGTCAGCATTGCAGCTGTGGTTTCTGGC...GCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp AACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCTGGGCGGCTGTACCTaGCTATCCTGTGGTAAACTT +
Preference number: 2 (lower is better)
Translates to: NLDITTSRPYLPFWAEPNLGGCT*LSCGKL
Trigger: AAGTTTACCACAGGATAGGCAGGTACAGCCGCCCAG...GTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp CTGTGCAGGAAACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCCTGGGCGGCTGTACCTaGCTATCCTGTGGTAAACTT +
Preference number: 2 (lower is better)
Translates to: LCRKPGHHHFKALPSFLGLGGCT*LSCGKL
Trigger: AAGTTTACCACAGGATAGGCAGGTACAGCCGCCCAG...GCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp AACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCCAGCTCACTTGCTTTaGTACCAGGGCTATACCTGC +
Preference number: 2 (lower is better)
Translates to: NLDITTSRPYLPFWAEPNPAHLL*YQGYTC
Trigger: GCAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCTGG...GTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp TGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGATTCTGCCAGCTCACTTaGTTTGCTACCAGGGCTATA +
Preference number: 2 (lower is better)
Translates to: CLEGHARVHRCLHPTCAGFCQLT*FATRAI
Trigger: TATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAA...TCCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp TCAAGGATGACAGCAGACCCCTCCCTTCTGCCGCAGTTACACTTACAGGTGGACCTGTCTGAAAGCAGGTaGTGCAGCAGCTGGCAACAA +
Preference number: 2 (lower is better)
Translates to: SRMTADPSLLPQLHLQVDLSESR*CSSWQQ
Trigger: TTGTTGCCAGCTGCTGCAGCACCTGCTTTCAGACAG...GTCCACCTGTAAGTGTAACTGCGGCAGAAGGGAGGGGTCTGCTGTCATCCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp TCAAGGATGACAGCAGACCCCTCCCTTCTGCCGCAGTTACACTTACAGGTGGACGACAAACAGGTATGTTaGCCTGGGATGGATGCAGGC +
Preference number: 2 (lower is better)
Translates to: SRMTADPSLLPQLHLQVDDKQVC*PGMDAG
Trigger: GCCTGCATCCATCCCAGGGCAACATACCTGTTTGTC...GTCCACCTGTAAGTGTAACTGCGGCAGAAGGGAGGGGTCTGCTGTCATCCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp AGGGGCTCTGCTCATCACAGGCTATCAAGGATGACAGCAGACCCCTCCCTTCTGAAAAACCAGGTCACCTaGACTCTCCCAAGGACTCTC +
Preference number: 2 (lower is better)
Translates to: RGSAHHRLSRMTADPSLLKNQVT*TLPRTL
Trigger: GAGAGTCCTTGGGAGAGTCCAGGTGACCTGGTTTTT...CAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp ACAGGTGGACTCAAGGTTGAATGTCAAAGGCAGAAAGTTACAACCTGGGAATACGGGAGCAGGCCTGGGTaGGACGGCACTCCCAGAAGA +
Preference number: 2 (lower is better)
Translates to: TGGLKVECQRQKVTTWEYGSRPG*DGTPRR
Trigger: TCTTCTGGGAGTGCCGTCTCACCCAGGCCTGCTCCC...GTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp ACAGGTGGACTCAAGGTTGAATGTCAAAGGCAGAAAGTTACAACCTGGGAATACTCGTCAGCACAGGTCTaGCAGGCCCCAGCCACGGTG +
Preference number: 2 (lower is better)
Translates to: TGGLKVECQRQKVTTWEYSSAQV*QAPATV
Trigger: CACCGTGGCTGGGGCCTGTCAGACCTGTGCTGACGA...GTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp AAGACTGAAAATGGGTTTCTTCTGCCAGCTCACTTGCTTTGCTACCAGGGCTATGCGGAGGTCAAGCTCTaGTGGAGTTGGGGGAGCTGG +
Preference number: 2 (lower is better)
Translates to: KTENGFLLPAHLLCYQGYAEVKL*WSWGSW
Trigger: CCAGCTCCCCCAACTCCAGCAGAGCTTGACCTCCGC...ATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTTCAGTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp ACACACTGCACACACTGGGCGGCTGTACCTGCCTATCCTGTGGTAAACTTGGCTTCCAAACCTTCCAGCTaGCCAGAACTGCTGGTAATC +
Preference number: 2 (lower is better)
Translates to: THCTHWAAVPAYPVVNLASKPSS*PELLVI
Trigger: GATTACCAGCAGTTCTGGGCAGCTGGAAGGTTTGGA...AGCCAAGTTTACCACAGGATAGGCAGGTACAGCCGCCCAGTGTGTGCAGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp GAAAACCCCTCCTTGTGTGGAACAGGTCTTTCTTCATTCCATTCCTCTGGGCCTCACACAAAGGGCGAATaGCTGCAGCTGAGCCTGGCA +
Preference number: 2 (lower is better)
Translates to: ENPSLCGTGLSSFHSSGPHTKGE*LQLSLA
Trigger: TGCCAGGCTCAGCTGCAGGCATTCGCCCTTTGTGTG...AGGCCCAGAGGAATGGAATGAAGAAAGACCTGTTCCACACAAGGAGGGGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp CGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCAAGTAAAACGACCCCCTCGTaGGAGCAGGCCTGGGTGAGA +
Preference number: 2 (lower is better)
Translates to: RGHRCGQNYVPSIFLCSSKTTPS*EQAWVR
Trigger: TCTCACCCAGGCCTGCTCCCACGAGGGGGTCGTTTT...ACTTGAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp ACAGGTGGACTCAAGGTTGAATGTCAAAGGCAGAAAGTTACAACCTGGGAATACGACACCACTCTGCTCTaGCTGGGGACTATGGGGCGC +
Preference number: 2 (lower is better)
Translates to: TGGLKVECQRQKVTTWEYDTTLL*LGTMGR
Trigger: GCGCCCCATAGTCCCCAGTCAGAGCAGAGTGGTGTC...GTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCACCAGGCCACAGAGCTaGCTAAGACAGAGCCCCTGT +
Preference number: 2 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFTRPQS*LRQSPC
Trigger: ACAGGGGCTCTGTCTTAGTCAGCTCTGTGGCCTGGT...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp TCAAGGATGACAGCAGACCCCTCCCTTCTGCCGCAGTTACACTTACAGGTGGACAAAACAAGCGCATCTTaGCCAGCTATGGGGTCTGAA +
Preference number: 2 (lower is better)
Translates to: SRMTADPSLLPQLHLQVDKTSAS*PAMGSE
Trigger: TTCAGACCCCATAGCTGGGCAAGATGCGCTTGTTTT...GTCCACCTGTAAGTGTAACTGCGGCAGAAGGGAGGGGTCTGCTGTCATCCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp GAAAACCCCTCCTTGTGTGGAACAGGTCTTTCTTCATTCCATTCCTCTGGGCCTTGGGGGAGCTGGTTCTaGTCAGCGCAGAGTCCAAAA +
Preference number: 2 (lower is better)
Translates to: ENPSLCGTGLSSFHSSGPWGSWF*SAQSPK
Trigger: TTTTGGACTCTGCGCTGAGCAGAACCAGCTCCCCCA...AGGCCCAGAGGAATGGAATGAAGAAAGACCTGTTCCACACAAGGAGGGGTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp CAGTATGAGAAGGTCCACTTCTCCATACCTCCACAACTCTGGGCATCTAAAACTGAAGACGGGCAGGGATaGAGCAGAGAGCCAGCAGCA +
Preference number: 2 (lower is better)
Translates to: QYEKVHFSIPPQLWASKTEDGQG*SREPAA
Trigger: TGCTGCTGGCTCTCTGCTGCATCCCTGCCCGTCTTC...AGTTTTAGATGCCCAGAGTTGTGGAGGTATGGAGAAGTGGACCTTCTCATACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp ACACACTGCACACACTGGGCGGCTGTACCTGCCTATCCTGTGGTAAACTTGGCTCATTCTTTGCCAAGATaGTATCCCACTCATCCCCCA +
Preference number: 2 (lower is better)
Translates to: THCTHWAAVPAYPVVNLAHSLPR*YPTHPP
Trigger: TGGGGGATGAGTGGGATAGCATCTTGGCAAAGAATG...AGCCAAGTTTACCACAGGATAGGCAGGTACAGCCGCCCAGTGTGTGCAGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp AAGACTGAAAATGGGTTTCTTCTGCCAGCTCACTTGCTTTGCTACCAGGGCTATCGCAATGCATGCGAGTaGGGAGTGAGCAGGGGATGG +
Preference number: 2 (lower is better)
Translates to: KTENGFLLPAHLLCYQGYRNACE*GVSRGW
Trigger: CCATCCCCTGCTCACTCCGCACTCGCATGCATTGCG...ATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTTCAGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp CAGTATGAGAAGGTCCACTTCTCCATACCTCCACAACTCTGGGCATCTAAAACTCGCAATGCATGCGAGTaGGGAGTGAGCAGGGGATGG +
Preference number: 2 (lower is better)
Translates to: QYEKVHFSIPPQLWASKTRNACE*GVSRGW
Trigger: CCATCCCCTGCTCACTCCGCACTCGCATGCATTGCG...AGTTTTAGATGCCCAGAGTTGTGGAGGTATGGAGAAGTGGACCTTCTCATACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp GAAAACCCCTCCTTGTGTGGAACAGGTCTTTCTTCATTCCATTCCTCTGGGCCTGACCCTCAAAGCCCCTaGCAGAAACCACAGCTGCAA +
Preference number: 2 (lower is better)
Translates to: ENPSLCGTGLSSFHSSGPDPQSP*QKPQLQ
Trigger: TTGCAGCTGTGGTTTCTGGCAGGGGCTTTGAGGGTC...AGGCCCAGAGGAATGGAATGAAGAAAGACCTGTTCCACACAAGGAGGGGTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp GAAAACCCCTCCTTGTGTGGAACAGGTCTTTCTTCATTCCATTCCTCTGGGCCTACAGCTCTGGACTGCTaGCTGGTCCTCACTTCACCT +
Preference number: 2 (lower is better)
Translates to: ENPSLCGTGLSSFHSSGPTALDC*LVLTSP
Trigger: AGGTGAAGTGAGGACCAGGCAGCAGTCCAGAGCTGT...AGGCCCAGAGGAATGGAATGAAGAAAGACCTGTTCCACACAAGGAGGGGTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp CTTTATTTGCCTTGCTCCTTTATTGCTGGATCTTTGGGCTTTTCCAGTTCTGCTCCCTGCCTTCGGGTCTaGCAGTGTGTGGGGGCCAGA +
Preference number: 2 (lower is better)
Translates to: LYLPCSFIAGSLGFSSSAPCLRV*QCVGAR
Trigger: TCTGGCCCCCACACACTGGCAGACCCGAAGGCAGGG...AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCAAATAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp ACAGGTGGACTCAAGGTTGAATGTCAAAGGCAGAAAGTTACAACCTGGGAATACGGGCCTGGGGGACTCTaGACACAGGCATGTGGAGAC +
Preference number: 2 (lower is better)
Translates to: TGGLKVECQRQKVTTWEYGPGGL*TQACGD
Trigger: GTCTCCACATGCCTGTGTGCAGAGTCCCCCAGGCCC...GTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCTCTGACTGGGGACTATaGGGCGCTCAAGCCACACAG +
Preference number: 2 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFSDWGL*GAQATQ
Trigger: CTGTGTGGCTTGAGCGCCCCATAGTCCCCAGTCAGA...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp CAGTATGAGAAGGTCCACTTCTCCATACCTCCACAACTCTGGGCATCTAAAACTAAAACGACCCCCTCGTaGGAGCAGGCCTGGGTGAGA +
Preference number: 2 (lower is better)
Translates to: QYEKVHFSIPPQLWASKTKTTPS*EQAWVR
Trigger: TCTCACCCAGGCCTGCTCCCACGAGGGGGTCGTTTT...AGTTTTAGATGCCCAGAGTTGTGGAGGTATGGAGAAGTGGACCTTCTCATACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp CGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCAAGTGCTGCAATGCTGACCTaGAATGCTCATGGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: RGHRCGQNYVPSIFLCSSAAMLT*NAHGQA
Trigger: GGCCTGGCCATGAGCATTCCAGGTCAGCATTGCAGC...ACTTGAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp ACAGGTGGACTCAAGGTTGAATGTCAAAGGCAGAAAGTTACAACCTGGGAATACCCCCCAGGAGCTGCCTaGGTCCCAAGGGCACAAAAG +
Preference number: 2 (lower is better)
Translates to: TGGLKVECQRQKVTTWEYPPGAA*VPRAQK
Trigger: CTTTTGTGCCCTTGGGACCCAGGCAGCTCCTGGGGG...GTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp ACAGGTGGACTCAAGGTTGAATGTCAAAGGCAGAAAGTTACAACCTGGGAATACGCAGAGCCAGCACCATaGCCCGTCCCTGAGCATGTC +
Preference number: 2 (lower is better)
Translates to: TGGLKVECQRQKVTTWEYAEPAP*PVPEHV
Trigger: GACATGCTCAGGGACGGGCCATGGTGCTGGCTCTGC...GTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp TCAAGGATGACAGCAGACCCCTCCCTTCTGCCGCAGTTACACTTACAGGTGGACAGCCAAGGCACTGCATaGGCATCATTCTCATTCAAC +
Preference number: 2 (lower is better)
Translates to: SRMTADPSLLPQLHLQVDSQGTA*ASFSFN
Trigger: GTTGAATGAGAATGATGCCCATGCAGTGCCTTGGCT...GTCCACCTGTAAGTGTAACTGCGGCAGAAGGGAGGGGTCTGCTGTCATCCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp CGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCAAGTACTTGTGGCCTGCTGTaGCCTTTCCCCTGCCTCAGT +
Preference number: 2 (lower is better)
Translates to: RGHRCGQNYVPSIFLCSSTCGLL*PFPCLS
Trigger: ACTGAGGCAGGGGAAAGGCCACAGCAGGCCACAAGT...ACTTGAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp AAGACTGAAAATGGGTTTCTTCTGCCAGCTCACTTGCTTTGCTACCAGGGCTATCCCAGCTATGGGGTCTaGAGTCATCTGGGGACACCA +
Preference number: 2 (lower is better)
Translates to: KTENGFLLPAHLLCYQGYPSYGV*SHLGTP
Trigger: TGGTGTCCCCAGATGACTTCAGACCCCATAGCTGGG...ATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTTCAGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp CCATATTTATTTGGCCCGTTTCAAAGTCCTCTATTCTCTGCTCATCTGTCCACACATGCGAGTGCGGAGTaGGCAGGGGATGGCAGCACA +
Preference number: 2 (lower is better)
Translates to: PYLFGPFQSPLFSAHLSTHASAE*AGDGST
Trigger: TGTGCTGCCATCCCCTGCTCACTCCGCACTCGCATG...TGTGGACAGATGAGCAGAGAATAGAGGACTTTGAAACGGGCCAAATAAATATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp AAGACTGAAAATGGGTTTCTTCTGCCAGCTCACTTGCTTTGCTACCAGGGCTATCCCACCCAGCTTCTTTaGTCAGACCCTTGGACCCTC +
Preference number: 2 (lower is better)
Translates to: KTENGFLLPAHLLCYQGYPTQLL*SDPWTL
Trigger: GAGGGTCCAAGGGTCTGATCAAAGAAGCTGGGTGGG...ATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTTCAGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCCATGAGGGTGGGCCCTaGTCCAATAGACTAGTGAGC +
Preference number: 2 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFHEGGP*SNRLVS
Trigger: GCTCACTAGTCTATTGGATCAGGGCCCACCCTCATG...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp CGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCAAGTTGGGGGAGCTGGTTCTaGTCAGCGCAGAGTCCAAAA +
Preference number: 2 (lower is better)
Translates to: RGHRCGQNYVPSIFLCSSWGSWF*SAQSPK
Trigger: TTTTGGACTCTGCGCTGAGCAGAACCAGCTCCCCCA...ACTTGAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp CTTTATTTGCCTTGCTCCTTTATTGCTGGATCTTTGGGCTTTTCCAGTTCTGCTGCGGAGGTCAAGCTCTaGTGGAGTTGGGGGAGCTGG +
Preference number: 2 (lower is better)
Translates to: LYLPCSFIAGSLGFSSSAAEVKL*WSWGSW
Trigger: CCAGCTCCCCCAACTCCAGCAGAGCTTGACCTCCGC...AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCAAATAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp CCTAGGTGGATGCTGCATGACTGGCCCTCAGACACACGGCAGACCATAACTCACGGAAACATCATTCTTTaGCAAGATGCTATCCCACTC +
Preference number: 2 (lower is better)
Translates to: PRWMLHDWPSDTRQTITHGNIIL*QDAIPL
Trigger: GAGTGGGATAGCATCTTGGCAAAGAATGATGTTTCC...GTGAGTTATGGTCTGCCGTGTGTCTGAGGGCCAGTCATGCAGCATCCACCTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp CAGTATGAGAAGGTCCACTTCTCCATACCTCCACAACTCTGGGCATCTAAAACTCACACAAAGGGCGAATaGCTGCAGCTGAGCCTGGCA +
Preference number: 2 (lower is better)
Translates to: QYEKVHFSIPPQLWASKTHTKGE*LQLSLA
Trigger: TGCCAGGCTCAGCTGCAGGCATTCGCCCTTTGTGTG...AGTTTTAGATGCCCAGAGTTGTGGAGGTATGGAGAAGTGGACCTTCTCATACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp CGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCAAGTAGTCAGTTCTCTACCTaGAGAGCCACCCACCCCCTA +
Preference number: 2 (lower is better)
Translates to: RGHRCGQNYVPSIFLCSSSQFST*RATHPL
Trigger: TAGGGGGTGGGTGGCTCTGCAGGTAGAGAACTGACT...ACTTGAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp AGGGGCTCTGCTCATCACAGGCTATCAAGGATGACAGCAGACCCCTCCCTTCTGAAAATGGGTTTCTTCTaGCAGCTCACTTGCTTTGCT +
Preference number: 2 (lower is better)
Translates to: RGSAHHRLSRMTADPSLLKMGFF*QLTCFA
Trigger: AGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTT...CAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp CGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCAAGTCCCACGCTGGGTGGCTaGTTGTACTTCTCCATACTG +
Preference number: 2 (lower is better)
Translates to: RGHRCGQNYVPSIFLCSSPTLGG*LYFSIL
Trigger: CAGTATGGAGAAGTACAAGCAGCCACCCAGCGTGGG...ACTTGAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp CGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCAAGTAAGAAGATGGCTATCTaGAGGCCAAGGAGCGAGGCC +
Preference number: 2 (lower is better)
Translates to: RGHRCGQNYVPSIFLCSSKKMAI*RPRSEA
Trigger: GGCCTCGCTCCTTGGCCTGCAGATAGCCATCTTCTT...ACTTGAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp CAGTATGAGAAGGTCCACTTCTCCATACCTCCACAACTCTGGGCATCTAAAACTTCTGACTGGGGACTATaGGGCGCTCAAGCCACACAG +
Preference number: 2 (lower is better)
Translates to: QYEKVHFSIPPQLWASKTSDWGL*GAQATQ
Trigger: CTGTGTGGCTTGAGCGCCCCATAGTCCCCAGTCAGA...AGTTTTAGATGCCCAGAGTTGTGGAGGTATGGAGAAGTGGACCTTCTCATACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp CAGTATGAGAAGGTCCACTTCTCCATACCTCCACAACTCTGGGCATCTAAAACTGAGGTCAAGCTCTGCTaGAGTTGGGGGAGCTGGTTC +
Preference number: 2 (lower is better)
Translates to: QYEKVHFSIPPQLWASKTEVKLC*SWGSWF
Trigger: GAACCAGCTCCCCCAACTCCAGCAGAGCTTGACCTC...AGTTTTAGATGCCCAGAGTTGTGGAGGTATGGAGAAGTGGACCTTCTCATACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp AGCTCACTTGCTTTGCTACCAGGGCTATACCTGCTTTCTAAAAATAGCTTCCCACCAACAGGGCAGACGTaGCAGACCCAGTTCAGTCCC +
Preference number: 2 (lower is better)
Translates to: SSLALLPGLYLLSKNSFPPTGQT*QTQFSP
Trigger: GGGACTGAACTGGGTCTGCCACGTCTGCCCTGTTGG...TGGGAAGCTATTTTTAGAAAGCAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp CTTTATTTGCCTTGCTCCTTTATTGCTGGATCTTTGGGCTTTTCCAGTTCTGCTGGGGCCTCACAGCTCTaGACTGCTGCCTGGTCCTCA +
Preference number: 2 (lower is better)
Translates to: LYLPCSFIAGSLGFSSSAGASQL*TAAWSS
Trigger: TGAGGACCAGGCAGCAGTCCAGAGCTGTGAGGCCCC...AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCAAATAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp CGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCAAGTTTCATTCCATTCCTCTaGGCCTGGGGCCTCACAGCT +
Preference number: 2 (lower is better)
Translates to: RGHRCGQNYVPSIFLCSSFIPFL*AWGLTA
Trigger: AGCTGTGAGGCCCCAGGCCCAGAGGAATGGAATGAA...ACTTGAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp CGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCAAGTCTGTCCAGAAGCCTGTaGGACAGGGTAAAGGTCAGC +
Preference number: 2 (lower is better)
Translates to: RGHRCGQNYVPSIFLCSSLSRSL*DRVKVS
Trigger: GCTGACCTTTACCCTGTCCCACAGGCTTCTGGACAG...ACTTGAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp CGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCAAGTTCCACTAAAGGGAGATaGGGAAGGTGGCCTGTCCAG +
Preference number: 2 (lower is better)
Translates to: RGHRCGQNYVPSIFLCSSSTKGR*GRWPVQ
Trigger: CTGGACAGGCCACCTTCCCCATCTCCCTTTAGTGGA...ACTTGAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCGGGTCTGCCAGTGTGTaGGGGCCAGAAGAGAAAAAC +
Preference number: 2 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFGSASV*GPEEKN
Trigger: GTTTTTCTCTTCTGGCCCCCACACACTGGCAGACCC...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp AGGGGCTCTGCTCATCACAGGCTATCAAGGATGACAGCAGACCCCTCCCTTCTGTTGCTCCTTTATTGCTaGATCTTTGGGCTTTTCCAG +
Preference number: 2 (lower is better)
Translates to: RGSAHHRLSRMTADPSLLLLLYC*IFGLFQ
Trigger: CTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAA...CAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp ACACACTGCACACACTGGGCGGCTGTACCTGCCTATCCTGTGGTAAACTTGGCTGATGCAACTATCTGCTaGGAGTTGATCTACAAAACG +
Preference number: 2 (lower is better)
Translates to: THCTHWAAVPAYPVVNLADATIC*ELIYKT
Trigger: CGTTTTGTAGATCAACTCTCAGCAGATAGTTGCATC...AGCCAAGTTTACCACAGGATAGGCAGGTACAGCCGCCCAGTGTGTGCAGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCCCAGGCCTCTGCTCCTaGCAGAATGGGAAACAAAGA +
Preference number: 2 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFPGLCS*QNGKQR
Trigger: TCTTTGTTTCCCATTCTGTCAGGAGCAGAGGCCTGG...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp ACAGGTGGACTCAAGGTTGAATGTCAAAGGCAGAAAGTTACAACCTGGGAATACCATCAGGGAGCAGTCTaGCCCAACCCACAAAAGGGG +
Preference number: 2 (lower is better)
Translates to: TGGLKVECQRQKVTTWEYHQGAV*PNPQKG
Trigger: CCCCTTTTGTGGGTTGGGTCAGACTGCTCCCTGATG...GTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp TCAAGGATGACAGCAGACCCCTCCCTTCTGCCGCAGTTACACTTACAGGTGGACAGACTAGTGAGCTTATaGGAGATTAGGACACAGACA +
Preference number: 2 (lower is better)
Translates to: SRMTADPSLLPQLHLQVDRLVSL*EIRTQT
Trigger: TGTCTGTGTCCTAATCTCTCATAAGCTCACTAGTCT...GTCCACCTGTAAGTGTAACTGCGGCAGAAGGGAGGGGTCTGCTGTCATCCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp AGCTCACTTGCTTTGCTACCAGGGCTATACCTGCTTTCTAAAAATAGCTTCCCACTGGGGACACCACTCTaGTCTGACTGGGGACTATGG +
Preference number: 2 (lower is better)
Translates to: SSLALLPGLYLLSKNSFPLGTPL*SDWGLW
Trigger: CCATAGTCCCCAGTCAGAGCAGAGTGGTGTCCCCAG...TGGGAAGCTATTTTTAGAAAGCAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp CAGTATGAGAAGGTCCACTTCTCCATACCTCCACAACTCTGGGCATCTAAAACTCTCACAGCTCTGGACTaGTGCCTGGTCCTCACTTCA +
Preference number: 2 (lower is better)
Translates to: QYEKVHFSIPPQLWASKTLTALD*CLVLTS
Trigger: TGAAGTGAGGACCAGGCAGCAGTCCAGAGCTGTGAG...AGTTTTAGATGCCCAGAGTTGTGGAGGTATGGAGAAGTGGACCTTCTCATACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCACAGGTGTGAGACACTaGTCCCGGCCAGTTTCTGAA +
Preference number: 2 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFTGVRH*SRPVSE
Trigger: TTCAGAAACTGGCCGGGAGCAGTGTCTCACACCTGT...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp CAGTATGAGAAGGTCCACTTCTCCATACCTCCACAACTCTGGGCATCTAAAACTGCTCACCACACCCTCTaGCTCCTGGGTTCAAGCAAT +
Preference number: 2 (lower is better)
Translates to: QYEKVHFSIPPQLWASKTAHHTL*LLGSSN
Trigger: ATTGCTTGAACCCAGGAGGCAGAGGGTGTGGTGAGC...AGTTTTAGATGCCCAGAGTTGTGGAGGTATGGAGAAGTGGACCTTCTCATACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCCTGTCTGAAAGCAGGTaGTGCAGCAGCTGGCAACAA +
Preference number: 2 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFLSESR*CSSWQQ
Trigger: TTGTTGCCAGCTGCTGCAGCACCTGCTTTCAGACAG...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp ACAGGTGGACTCAAGGTTGAATGTCAAAGGCAGAAAGTTACAACCTGGGAATACCCACTCTGCTCTGACTaGGGACTATGGGGCGCTCAA +
Preference number: 2 (lower is better)
Translates to: TGGLKVECQRQKVTTWEYPLCSD*GLWGAQ
Trigger: TTGAGCGCCCCATAGTCCCCAGTCAGAGCAGAGTGG...GTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCCATCTTGCCCAGCTATaGGGTCTGAAGTCATCTGGG +
Preference number: 2 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFHLAQL*GLKSSG
Trigger: CCCAGATGACTTCAGACCCCATAGCTGGGCAAGATG...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp ACAGGTGGACTCAAGGTTGAATGTCAAAGGCAGAAAGTTACAACCTGGGAATACCCCCCAGAATCAAAGTaGCCACTTCCTCCAGGCAGC +
Preference number: 2 (lower is better)
Translates to: TGGLKVECQRQKVTTWEYPPESK*PLPPGS
Trigger: GCTGCCTGGAGGAAGTGGCCACTTTGATTCTGGGGG...GTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp TCAAGGATGACAGCAGACCCCTCCCTTCTGCCGCAGTTACACTTACAGGTGGACAAACCCCTCCTTGTGTaGAACAGGTCTTTCTTCATT +
Preference number: 2 (lower is better)
Translates to: SRMTADPSLLPQLHLQVDKPLLV*NRSFFI
Trigger: AATGAAGAAAGACCTGTTCCACACAAGGAGGGGTTT...GTCCACCTGTAAGTGTAACTGCGGCAGAAGGGAGGGGTCTGCTGTCATCCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp CAGTATGAGAAGGTCCACTTCTCCATACCTCCACAACTCTGGGCATCTAAAACTACACACTGCACACACTaGGCGGCTGTACCTGCCTAT +
Preference number: 2 (lower is better)
Translates to: QYEKVHFSIPPQLWASKTTHCTH*AAVPAY
Trigger: ATAGGCAGGTACAGCCGCCCAGTGTGTGCAGTGTGT...AGTTTTAGATGCCCAGAGTTGTGGAGGTATGGAGAAGTGGACCTTCTCATACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp AAGACTGAAAATGGGTTTCTTCTGCCAGCTCACTTGCTTTGCTACCAGGGCTATACACACTGCACACACTaGGCGGCTGTACCTGCCTAT +
Preference number: 2 (lower is better)
Translates to: KTENGFLLPAHLLCYQGYTHCTH*AAVPAY
Trigger: ATAGGCAGGTACAGCCGCCCAGTGTGTGCAGTGTGT...ATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTTCAGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp CCATATTTATTTGGCCCGTTTCAAAGTCCTCTATTCTCTGCTCATCTGTCCACAAGGGCAGCTGTGACCTaGCACAGAAGCATGGGGCTG +
Preference number: 2 (lower is better)
Translates to: PYLFGPFQSPLFSAHLSTRAAVT*HRSMGL
Trigger: CAGCCCCATGCTTCTGTGCCAGGTCACAGCTGCCCT...TGTGGACAGATGAGCAGAGAATAGAGGACTTTGAAACGGGCCAAATAAATATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp ACAGGTGGACTCAAGGTTGAATGTCAAAGGCAGAAAGTTACAACCTGGGAATACGCTGCTGCCGTCCTATaGAACTCAGGTGTGGCTCTG +
Preference number: 2 (lower is better)
Translates to: TGGLKVECQRQKVTTWEYAAAVL*NSGVAL
Trigger: CAGAGCCACACCTGAGTTCCATAGGACGGCAGCAGC...GTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp ACAGGTGGACTCAAGGTTGAATGTCAAAGGCAGAAAGTTACAACCTGGGAATACACAGGTATGTTGCCCTaGGATGGATGCAGGCCCCTC +
Preference number: 2 (lower is better)
Translates to: TGGLKVECQRQKVTTWEYTGMLP*DGCRPL
Trigger: GAGGGGCCTGCATCCATCCCAGGGCAACATACCTGT...GTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCGACACGGCAAGAAGATaGCTATCTGCAGGCCAAGGA +
Preference number: 2 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFDTARR*LSAGQG
Trigger: TCCTTGGCCTGCAGATAGCCATCTTCTTGCCGTGTC...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp AGGGGCTCTGCTCATCACAGGCTATCAAGGATGACAGCAGACCCCTCCCTTCTGCAGAAAGTTACAACCTaGGAATACAGGATAATGCCT +
Preference number: 2 (lower is better)
Translates to: RGSAHHRLSRMTADPSLLQKVTT*EYRIMP
Trigger: AGGCATTATCCTGTATTCCCAGGTTGTAACTTTCTG...CAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp CTTTATTTGCCTTGCTCCTTTATTGCTGGATCTTTGGGCTTTTCCAGTTCTGCTACCAGGCCACAGAGCTaGCTAAGACAGAGCCCCTGT +
Preference number: 2 (lower is better)
Translates to: LYLPCSFIAGSLGFSSSATRPQS*LRQSPC
Trigger: ACAGGGGCTCTGTCTTAGTCAGCTCTGTGGCCTGGT...AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCAAATAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp CCATATTTATTTGGCCCGTTTCAAAGTCCTCTATTCTCTGCTCATCTGTCCACACCACAGCTGCAATGCTaGCCTGGAATGCTCATGGCC +
Preference number: 2 (lower is better)
Translates to: PYLFGPFQSPLFSAHLSTPQLQC*PGMLMA
Trigger: GGCCATGAGCATTCCAGGTCAGCATTGCAGCTGTGG...TGTGGACAGATGAGCAGAGAATAGAGGACTTTGAAACGGGCCAAATAAATATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp CCATATTTATTTGGCCCGTTTCAAAGTCCTCTATTCTCTGCTCATCTGTCCACACCCACCCAGCTTCTTTaGTCAGACCCTTGGACCCTC +
Preference number: 2 (lower is better)
Translates to: PYLFGPFQSPLFSAHLSTPTQLL*SDPWTL
Trigger: GAGGGTCCAAGGGTCTGATCAAAGAAGCTGGGTGGG...TGTGGACAGATGAGCAGAGAATAGAGGACTTTGAAACGGGCCAAATAAATATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp CTTTATTTGCCTTGCTCCTTTATTGCTGGATCTTTGGGCTTTTCCAGTTCTGCTCCCACCCAGCTTCTTTaGTCAGACCCTTGGACCCTC +
Preference number: 2 (lower is better)
Translates to: LYLPCSFIAGSLGFSSSAPTQLL*SDPWTL
Trigger: GAGGGTCCAAGGGTCTGATCAAAGAAGCTGGGTGGG...AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCAAATAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp AGCTCACTTGCTTTGCTACCAGGGCTATACCTGCTTTCTAAAAATAGCTTCCCACTGAGGGTCACAGTCTaGCAGGAGGGAGATCCAAGT +
Preference number: 2 (lower is better)
Translates to: SSLALLPGLYLLSKNSFPLRVTV*QEGDPS
Trigger: ACTTGGATCTCCCTCCTGGCAGACTGTGACCCTCAG...TGGGAAGCTATTTTTAGAAAGCAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp AGCTCACTTGCTTTGCTACCAGGGCTATACCTGCTTTCTAAAAATAGCTTCCCAGACCCTCAAAGCCCCTaGCAGAAACCACAGCTGCAA +
Preference number: 2 (lower is better)
Translates to: SSLALLPGLYLLSKNSFPDPQSP*QKPQLQ
Trigger: TTGCAGCTGTGGTTTCTGGCAGGGGCTTTGAGGGTC...TGGGAAGCTATTTTTAGAAAGCAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp CTTTATTTGCCTTGCTCCTTTATTGCTGGATCTTTGGGCTTTTCCAGTTCTGCTAGAGTGGGCACACACTaGACACACTGGGCGGCTGTA +
Preference number: 2 (lower is better)
Translates to: LYLPCSFIAGSLGFSSSARVGTH*THWAAV
Trigger: TACAGCCGCCCAGTGTGTGCAGTGTGTGCCCACTCT...AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCAAATAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp ACAGGTGGACTCAAGGTTGAATGTCAAAGGCAGAAAGTTACAACCTGGGAATACGCTCACCACACCCTCTaGCTCCTGGGTTCAAGCAAT +
Preference number: 2 (lower is better)
Translates to: TGGLKVECQRQKVTTWEYAHHTL*LLGSSN
Trigger: ATTGCTTGAACCCAGGAGGCAGAGGGTGTGGTGAGC...GTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp ACAGGTGGACTCAAGGTTGAATGTCAAAGGCAGAAAGTTACAACCTGGGAATACTGCCTAGGTGGATGCTaGATGACTGGCCCTCAGACA +
Preference number: 2 (lower is better)
Translates to: TGGLKVECQRQKVTTWEYCLGGC*MTGPQT
Trigger: TGTCTGAGGGCCAGTCATGCAGCATCCACCTAGGCA...GTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp CTTTATTTGCCTTGCTCCTTTATTGCTGGATCTTTGGGCTTTTCCAGTTCTGCTGCCAGAGTCCATCGTTaGCTCCACCCTACCTGTGCA +
Preference number: 2 (lower is better)
Translates to: LYLPCSFIAGSLGFSSSAARVHR*LHPTCA
Trigger: TGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGC...AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCAAATAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp TCAAGGATGACAGCAGACCCCTCCCTTCTGCCGCAGTTACACTTACAGGTGGACCAAGTAGTCACAGCATaGATGTGCCTAGAATTGTTA +
Preference number: 2 (lower is better)
Translates to: SRMTADPSLLPQLHLQVDQVVTA*MCLELL
Trigger: TAACAATTCTAGGCACATGCATGCTGTGACTACTTG...GTCCACCTGTAAGTGTAACTGCGGCAGAAGGGAGGGGTCTGCTGTCATCCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp CCATATTTATTTGGCCCGTTTCAAAGTCCTCTATTCTCTGCTCATCTGTCCACACCACTCTGCTCTGACTaGGGACTATGGGGCGCTCAA +
Preference number: 2 (lower is better)
Translates to: PYLFGPFQSPLFSAHLSTPLCSD*GLWGAQ
Trigger: TTGAGCGCCCCATAGTCCCCAGTCAGAGCAGAGTGG...TGTGGACAGATGAGCAGAGAATAGAGGACTTTGAAACGGGCCAAATAAATATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp ACAGGTGGACTCAAGGTTGAATGTCAAAGGCAGAAAGTTACAACCTGGGAATACCTGTCCAGAAGCCTGTaGGACAGGGTAAAGGTCAGC +
Preference number: 2 (lower is better)
Translates to: TGGLKVECQRQKVTTWEYLSRSL*DRVKVS
Trigger: GCTGACCTTTACCCTGTCCCACAGGCTTCTGGACAG...GTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp CTTTATTTGCCTTGCTCCTTTATTGCTGGATCTTTGGGCTTTTCCAGTTCTGCTTCAAGCCTGCCTAGGTaGATGCTGCATGACTGGCCC +
Preference number: 2 (lower is better)
Translates to: LYLPCSFIAGSLGFSSSASSLPR*MLHDWP
Trigger: GGGCCAGTCATGCAGCATCCACCTAGGCAGGCTTGA...AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCAAATAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CAA 90 bp TTTTGTTGTTTTCACAATTGTAAACCTGAAAGGGACTTGAACTTCTaGTCCAAGCACCAGAGTGGGCACACACTGCACACACTGGGCGGC +
Preference number: 2 (lower is better)
Translates to: FCCFHNCKPERDLNF*SKHQSGHTLHTLGG
Trigger: GCCGCCCAGTGTGTGCAGTGTGTGCCCACTCTGGTGCTTGGACAAGAAGTTCAAGTCCCTTTCAGGTTTACAATTGTGAAAACAACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp CTTTATTTGCCTTGCTCCTTTATTGCTGGATCTTTGGGCTTTTCCAGTTCTGCTCAGGCCACTTCATCATaGGGGGCAGCATTGTTCCCA +
Preference number: 2 (lower is better)
Translates to: LYLPCSFIAGSLGFSSSAQATSS*GAALFP
Trigger: TGGGAACAATGCTGCCCCTCATGATGAAGTGGCCTG...AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCAAATAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCCTTCTAACCACCCCATaGGGAAAAACTCTGGTCACA +
Preference number: 2 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFLLTTP*GKTLVT
Trigger: TGTGACCAGAGTTTTTCCTCATGGGGTGGTTAGAAG...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp TCAAGGATGACAGCAGACCCCTCCCTTCTGCCGCAGTTACACTTACAGGTGGACGAAAGATTTCTTAAGTaGGAAACAGCATCCCATACA +
Preference number: 2 (lower is better)
Translates to: SRMTADPSLLPQLHLQVDERFLK*ETASHT
Trigger: TGTATGGGATGCTGTTTCTCACTTAAGAAATCTTTC...GTCCACCTGTAAGTGTAACTGCGGCAGAAGGGAGGGGTCTGCTGTCATCCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp CTTTATTTGCCTTGCTCCTTTATTGCTGGATCTTTGGGCTTTTCCAGTTCTGCTCTGGTAGGCAGCCACTaGACCACCTCAGCCAGTAAT +
Preference number: 2 (lower is better)
Translates to: LYLPCSFIAGSLGFSSSALVGSH*TTSASN
Trigger: ATTACTGGCTGAGGTGGTGCAGTGGCTGCCTACCAG...AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCAAATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp ACAGGTGGACTCAAGGTTGAATGTCAAAGGCAGAAAGTTACAACCTGGGAATACCCAGCTCACTTGCTTTaGTACCAGGGCTATACCTGC +
Preference number: 2 (lower is better)
Translates to: TGGLKVECQRQKVTTWEYPAHLL*YQGYTC
Trigger: GCAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCTGG...GTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp ACAGGTGGACTCAAGGTTGAATGTCAAAGGCAGAAAGTTACAACCTGGGAATACCCAACCTCCAGTCCCTaGTCTAAACCCCCATGTAGT +
Preference number: 2 (lower is better)
Translates to: TGGLKVECQRQKVTTWEYPTSSP*SKPPCS
Trigger: ACTACATGGGGGTTTAGAGCAGGGACTGGAGGTTGG...GTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp CCATATTTATTTGGCCCGTTTCAAAGTCCTCTATTCTCTGCTCATCTGTCCACAGTCCAAGCACCAGAGTaGGCACACACTGCACACACT +
Preference number: 2 (lower is better)
Translates to: PYLFGPFQSPLFSAHLSTVQAPE*AHTAHT
Trigger: AGTGTGTGCAGTGTGTGCCCACTCTGGTGCTTGGAC...TGTGGACAGATGAGCAGAGAATAGAGGACTTTGAAACGGGCCAAATAAATATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp ACAGGTGGACTCAAGGTTGAATGTCAAAGGCAGAAAGTTACAACCTGGGAATACCCCTACCTTCCTTTCTaGGCAGAGCCCAACCACAAT +
Preference number: 2 (lower is better)
Translates to: TGGLKVECQRQKVTTWEYPYLPF*AEPNHN
Trigger: ATTGTGGTTGGGCTCTGCCCAGAAAGGAAGGTAGGG...GTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp CGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCAAGTAGCCAAGGCACTGCATaGGCATCATTCTCATTCAAC +
Preference number: 2 (lower is better)
Translates to: RGHRCGQNYVPSIFLCSSSQGTA*ASFSFN
Trigger: GTTGAATGAGAATGATGCCCATGCAGTGCCTTGGCT...ACTTGAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp AAGACTGAAAATGGGTTTCTTCTGCCAGCTCACTTGCTTTGCTACCAGGGCTATCTATCTGCTGAGAGTTaGTCTACAAAACGACCCCCT +
Preference number: 2 (lower is better)
Translates to: KTENGFLLPAHLLCYQGYLSAES*STKRPP
Trigger: AGGGGGTCGTTTTGTAGATCAACTCTCAGCAGATAG...ATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTTCAGTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp CTTTATTTGCCTTGCTCCTTTATTGCTGGATCTTTGGGCTTTTCCAGTTCTGCTAAGGACTCTCAAGCCTaGCTAGGTGGATGCTGCATG +
Preference number: 2 (lower is better)
Translates to: LYLPCSFIAGSLGFSSSAKDSQA*LGGCCM
Trigger: CATGCAGCATCCACCTAGGCAGGCTTGAGAGTCCTT...AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCAAATAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp CTTTATTTGCCTTGCTCCTTTATTGCTGGATCTTTGGGCTTTTCCAGTTCTGCTAGGGTAAAGGTCAGCTaGGTGACTAGGCTGTCCATC +
Preference number: 2 (lower is better)
Translates to: LYLPCSFIAGSLGFSSSARVKVS*VTRLSI
Trigger: GATGGACAGCCTAGTCACCCAGCTGACCTTTACCCT...AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCAAATAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp CGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCAAGTCCACAGAAATGGAAGTaGGGTGACACACATTACTTG +
Preference number: 2 (lower is better)
Translates to: RGHRCGQNYVPSIFLCSSPQKWK*GDTHYL
Trigger: CAAGTAATGTGTGTCACCCCACTTCCATTTCTGTGG...ACTTGAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp CCATATTTATTTGGCCCGTTTCAAAGTCCTCTATTCTCTGCTCATCTGTCCACAGAAGGACTGACACCATaGTTAGAAAGCAGAGCCAGC +
Preference number: 2 (lower is better)
Translates to: PYLFGPFQSPLFSAHLSTEGLTP*LESRAS
Trigger: GCTGGCTCTGCTTTCTAATCATGGTGTCAGTCCTTC...TGTGGACAGATGAGCAGAGAATAGAGGACTTTGAAACGGGCCAAATAAATATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp CGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCAAGTTTATTGCTGGATCTTTaGGCTTTTCCAGTTCTGCTG +
Preference number: 2 (lower is better)
Translates to: RGHRCGQNYVPSIFLCSSLLLDL*AFPVLL
Trigger: CAGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAA...ACTTGAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp CAGTATGAGAAGGTCCACTTCTCCATACCTCCACAACTCTGGGCATCTAAAACTTACTGGCATAAAGAGTaGGGCACATACATGGCTTTA +
Preference number: 2 (lower is better)
Translates to: QYEKVHFSIPPQLWASKTYWHKE*GTYMAL
Trigger: TAAAGCCATGTATGTGCCTCACTCTTTATGCCAGTA...AGTTTTAGATGCCCAGAGTTGTGGAGGTATGGAGAAGTGGACCTTCTCATACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp CCATATTTATTTGGCCCGTTTCAAAGTCCTCTATTCTCTGCTCATCTGTCCACACATTCTTTGCCAAGATaGTATCCCACTCATCCCCCA +
Preference number: 2 (lower is better)
Translates to: PYLFGPFQSPLFSAHLSTHSLPR*YPTHPP
Trigger: TGGGGGATGAGTGGGATAGCATCTTGGCAAAGAATG...TGTGGACAGATGAGCAGAGAATAGAGGACTTTGAAACGGGCCAAATAAATATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp CGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCAAGTCAGCTTTATTTGCCTTaGTCCTTTATTGCTGGATCT +
Preference number: 2 (lower is better)
Translates to: RGHRCGQNYVPSIFLCSSQLYLP*SFIAGS
Trigger: AGATCCAGCAATAAAGGAGCAAGGCAAATAAAGCTG...ACTTGAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCGGTAACAGCTTTATTTaGCTTGCTCCTTTATTGCTG +
Preference number: 2 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFGNSFI*LAPLLL
Trigger: CAGCAATAAAGGAGCAAGGCAAATAAAGCTGTTACC...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp CGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCAAGTAGTGAGGCACATACATaGCTTTACTATTTTCCAGAG +
Preference number: 2 (lower is better)
Translates to: RGHRCGQNYVPSIFLCSSSEAHT*LYYFPE
Trigger: CTCTGGAAAATAGTAAAGCCATGTATGTGCCTCACT...ACTTGAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CAA 90 bp AAGGTGTTGTTTTGTTGTTTTCACAATTGTAAACCTGAAAGGGACTaGAACTTCTTGTCCAAGCACCAGAGTGGGCACACACTGCACACA +
Preference number: 2 (lower is better)
Translates to: KVLFCCFHNCKPERD*NFLSKHQSGHTLHT
Trigger: TGTGTGCAGTGTGTGCCCACTCTGGTGCTTGGACAAGAAGTTCAAGTCCCTTTCAGGTTTACAATTGTGAAAACAACAAAACAACACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp ACAGGTGGACTCAAGGTTGAATGTCAAAGGCAGAAAGTTACAACCTGGGAATACGATGCAACTATCTGCTaGGAGTTGATCTACAAAACG +
Preference number: 2 (lower is better)
Translates to: TGGLKVECQRQKVTTWEYDATIC*ELIYKT
Trigger: CGTTTTGTAGATCAACTCTCAGCAGATAGTTGCATC...GTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp CCATATTTATTTGGCCCGTTTCAAAGTCCTCTATTCTCTGCTCATCTGTCCACACTCCCGGCCAGTTTCTaGATAAGTTTAATCAGATGC +
Preference number: 2 (lower is better)
Translates to: PYLFGPFQSPLFSAHLSTLPASF*ISLIRC
Trigger: GCATCTGATTAAACTTATTCAGAAACTGGCCGGGAG...TGTGGACAGATGAGCAGAGAATAGAGGACTTTGAAACGGGCCAAATAAATATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR TCA 90 bp CAGTATGAGAAGGTCCACTTCTCCATACCTCCACAACTCTGGGCATCTAAAACTGCCAACTGCTTTTACTaGATAATCCATTTTACTCGT +
Preference number: 2 (lower is better)
Translates to: QYEKVHFSIPPQLWASKTANCFY*IIHFTR
Trigger: ACGAGTAAAATGGATTATTCAGTAAAAGCAGTTGGC...AGTTTTAGATGCCCAGAGTTGTGGAGGTATGGAGAAGTGGACCTTCTCATACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR GCA 90 bp CCATATTTATTTGGCCCGTTTCAAAGTCCTCTATTCTCTGCTCATCTGTCCACAGGAAACATCATTCTTTaGCAAGATGCTATCCCACTC +
Preference number: 2 (lower is better)
Translates to: PYLFGPFQSPLFSAHLSTGNIIL*QDAIPL
Trigger: GAGTGGGATAGCATCTTGGCAAAGAATGATGTTTCC...TGTGGACAGATGAGCAGAGAATAGAGGACTTTGAAACGGGCCAAATAAATATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCATTTCCATATTTATTTaGCCCGTTTCAAAGTCCTCT +
Preference number: 2 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFISIFI*PVSKSS
Trigger: AGAGGACTTTGAAACGGGCCAAATAAATATGGAAAT...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCATACCTCCACAACTCTaGGCATCTAAAACTTTTAAA +
Preference number: 2 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFIPPQL*ASKTFK
Trigger: TTTAAAAGTTTTAGATGCCCAGAGTTGTGGAGGTAT...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CCA 90 bp CTTTATTTGCCTTGCTCCTTTATTGCTGGATCTTTGGGCTTTTCCAGTTCTGCTCATGAGGAAAAACTCTaGTCACAGCTCAAAAAGGTC +
Preference number: 2 (lower is better)
Translates to: LYLPCSFIAGSLGFSSSAHEEKL*SQLKKV
Trigger: GACCTTTTTGAGCTGTGACCAGAGTTTTTCCTCATG...AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCAAATAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR GCA 72 bp GCAGCAGGGAAAGGGCACAGGGCGGAGGTCAAGCTCTaGTGGAGTTGGGGGAGCTGGTTCTGCTCAGCGCAG +
Preference number: 3 (lower is better)
Translates to: AAGKGHRAEVKL*WSWGSWFCSAQ
Trigger: CTGCGCTGAGCAGAACCAGCTCCCCCAACTCCAGCAGAGCTTGACCTCCGCCCTGTGCCCTTTCCCTGCTGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR TCA 72 bp TCTACAAAACGACCCCCTCGTGGGAGCAGGCCTGGGTaGGACGGCACTCCCAGAAGACGGGCAGGGATGCAG +
Preference number: 3 (lower is better)
Translates to: STKRPPRGSRPG*DGTPRRRAGMQ
Trigger: CTGCATCCCTGCCCGTCTTCTGGGAGTGCCGTCTCACCCAGGCCTGCTCCCACGAGGGGGTCGTTTTGTAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CCA 72 bp GCAGGGAAAGGGCACAGGGCGGAGGTCAAGCTCTGCTaGAGTTGGGGGAGCTGGTTCTGCTCAGCGCAGAGT +
Preference number: 3 (lower is better)
Translates to: AGKGHRAEVKLC*SWGSWFCSAQS
Trigger: ACTCTGCGCTGAGCAGAACCAGCTCCCCCAACTCCAGCAGAGCTTGACCTCCGCCCTGTGCCCTTTCCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR TCA 72 bp GAAATATGTCCAGGTAGGCTGTCGTCAGCACAGGTCTaGCAGGCCCCAGCCACGGTGGCCCACAGGTGCAAG +
Preference number: 3 (lower is better)
Translates to: EICPGRLSSAQV*QAPATVAHRCK
Trigger: CTTGCACCTGTGGGCCACCGTGGCTGGGGCCTGTCAGACCTGTGCTGACGACAGCCTACCTGGACATATTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CCA 72 bp TTGATCTACAAAACGACCCCCTCGTGGGAGCAGGCCTaGGTGAGACGGCACTCCCAGAAGACGGGCAGGGAT +
Preference number: 3 (lower is better)
Translates to: LIYKTTPSWEQA*VRRHSQKTGRD
Trigger: ATCCCTGCCCGTCTTCTGGGAGTGCCGTCTCACCCAGGCCTGCTCCCACGAGGGGGTCGTTTTGTAGATCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CCA 72 bp CCTGGACTCTCCCAAGGACTCTCAAGCCTGCCTAGGTaGATGCTGCATGACTGGCCCTCAGACACACGGCAG +
Preference number: 3 (lower is better)
Translates to: PGLSQGLSSLPR*MLHDWPSDTRQ
Trigger: CTGCCGTGTGTCTGAGGGCCAGTCATGCAGCATCCACCTAGGCAGGCTTGAGAGTCCTTGGGAGAGTCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR GCA 72 bp GACTCTCCCAAGGACTCTCAAGCCTGCCTAGGTGGATaGTGCATGACTGGCCCTCAGACACACGGCAGACCA +
Preference number: 3 (lower is better)
Translates to: DSPKDSQACLGG*CMTGPQTHGRP
Trigger: TGGTCTGCCGTGTGTCTGAGGGCCAGTCATGCAGCATCCACCTAGGCAGGCTTGAGAGTCCTTGGGAGAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR GCA 72 bp CCAGGTCACCTGGACTCTCCCAAGGACTCTCAAGCCTaGCTAGGTGGATGCTGCATGACTGGCCCTCAGACA +
Preference number: 3 (lower is better)
Translates to: PGHLDSPKDSQA*LGGCCMTGPQT
Trigger: TGTCTGAGGGCCAGTCATGCAGCATCCACCTAGGCAGGCTTGAGAGTCCTTGGGAGAGTCCAGGTGACCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR GCA 72 bp GAAAGGAGCTGTGTGCACTGCCTGTCTGGAAGGCCATaGCAGAGTCCATCGTTGCCTCCACCCTACCTGTGC +
Preference number: 3 (lower is better)
Translates to: ERSCVHCLSGRP*QSPSLPPPYLC
Trigger: GCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACAGGCAGTGCACACAGCTCCTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CCA 72 bp TCATTCCATTCCTCTGGGCCTGGGGCCTCACAGCTCTaGACTGCTGCCTGGTCCTCACTTCACCTACAGCTC +
Preference number: 3 (lower is better)
Translates to: SFHSSGPGASQL*TAAWSSLHLQL
Trigger: GAGCTGTAGGTGAAGTGAGGACCAGGCAGCAGTCCAGAGCTGTGAGGCCCCAGGCCCAGAGGAATGGAATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CCA 72 bp AAGGGAGATGGGGAAGGTGGCCTGTCCAGAAGCCTGTaGGACAGGGTAAAGGTCAGCTGGGTGACTAGGCTG +
Preference number: 3 (lower is better)
Translates to: KGDGEGGLSRSL*DRVKVSWVTRL
Trigger: CAGCCTAGTCACCCAGCTGACCTTTACCCTGTCCCACAGGCTTCTGGACAGGCCACCTTCCCCATCTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CAA 90 bp CTGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGTCTTTGATCAGACCCTaGGACCCTCAAAGCCCCTGC +
Preference number: 3 (lower is better)
Translates to: LSGRPCQSPSLPPPYLCRSLIRP*DPQSPC
Trigger: GCAGGGGCTTTGAGGGTCCAAGGGTCTGATCAAAGA...CCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR TCA 72 bp AAGCAGGTGCTGCAGCAGCTGGCAACAAAGCCACTCTaGAAGGAGCTGTGTGCACTGCCTGTCTGGAAGGCC +
Preference number: 3 (lower is better)
Translates to: KQVLQQLATKPL*KELCALPVWKA
Trigger: GGCCTTCCAGACAGGCAGTGCACACAGCTCCTTTCAGAGTGGCTTTGTTGCCAGCTGCTGCAGCACCTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR TCA 72 bp GGCAGAGGGGCTCTGCTCATCACAGGCTATCAAGGATaGCAGCAGACCCCTCCCTTCTGCCGCAGTTACACT +
Preference number: 3 (lower is better)
Translates to: GRGALLITGYQG*QQTPPFCRSYT
Trigger: AGTGTAACTGCGGCAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR GCA 72 bp AGTGGGCACACACTGCACACACTGGGCGGCTGTACCTaGCTATCCTGTGGTAAACTTGGCTCCAGGAGCTTC +
Preference number: 3 (lower is better)
Translates to: SGHTLHTLGGCT*LSCGKLGSRSF
Trigger: GAAGCTCCTGGAGCCAAGTTTACCACAGGATAGGCAGGTACAGCCGCCCAGTGTGTGCAGTGTGTGCCCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR GCA 72 bp CAGGCCAAGGAGCGAGGCCTCAGGAGAAACCAACCCTaGCCACACCTTGATCTCAGGCTTCTAGCTCCAGAA +
Preference number: 3 (lower is better)
Translates to: QAKERGLRRNQP*PHLDLRLLAPE
Trigger: TTCTGGAGCTAGAAGCCTGAGATCAAGGTGTGGGCAGGGTTGGTTTCTCCTGAGGCCTCGCTCCTTGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CCA 72 bp AGCGCATCTTGCCCAGCTATGGGGTCTGAAGTCATCTaGGGACACCACTCTGCTCTGACTGGGGACTATGGG +
Preference number: 3 (lower is better)
Translates to: SASCPAMGSEVI*GHHSALTGDYG
Trigger: CCCATAGTCCCCAGTCAGAGCAGAGTGGTGTCCCCAGATGACTTCAGACCCCATAGCTGGGCAAGATGCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CCA 72 bp TGGAACAGGTCTTTCTTCATTCCATTCCTCTGGGCCTaGGGCCTCACAGCTCTGGACTGCTGCCTGGTCCTC +
Preference number: 3 (lower is better)
Translates to: WNRSFFIPFLWA*GLTALDCCLVL
Trigger: GAGGACCAGGCAGCAGTCCAGAGCTGTGAGGCCCCAGGCCCAGAGGAATGGAATGAAGAAAGACCTGTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CCA 72 bp GGCTGGAGTATCCACTTCAGGTCCACTAAAGGGAGATaGGGAAGGTGGCCTGTCCAGAAGCCTGTGGGACAG +
Preference number: 3 (lower is better)
Translates to: GWSIHFRSTKGR*GRWPVQKPVGQ
Trigger: CTGTCCCACAGGCTTCTGGACAGGCCACCTTCCCCATCTCCCTTTAGTGGACCTGAAGTGGATACTCCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR TCA 72 bp CCCTGCTCTAAACCCCCATGTAGTGGTACCGAACCATaGCCACCCCTGGCAAGAGCCTTCATGCACCTAGCA +
Preference number: 3 (lower is better)
Translates to: PCSKPPCSGTEP*PPLARAFMHLA
Trigger: TGCTAGGTGCATGAAGGCTCTTGCCAGGGGTGGTCATGGTTCGGTACCACTACATGGGGGTTTAGAGCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR GCA 72 bp CCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTaGAGGAAACCTGGACATCACCACTTCAAGGCCCTA +
Preference number: 3 (lower is better)
Translates to: PCQSPSLPPPYL*RKPGHHHFKAL
Trigger: TAGGGCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR GCA 72 bp ATACTGAGCACCCCAGCCCATAGGATGATCAGCTGCTaGCGTCCTATGGAACTCAGGTGTGGCTCTGTGGCT +
Preference number: 3 (lower is better)
Translates to: ILSTPAHRMISC*RPMELRCGSVA
Trigger: AGCCACAGAGCCACACCTGAGTTCCATAGGACGGCAGCAGCTGATCATCCTATGGGCTGGGGTGCTCAGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR GCA 72 bp AGACACAGACAGGGACACGGCAAGAAGATGGCTATCTaGAGGCCAAGGAGCGAGGCCTCAGGAGAAACCAAC +
Preference number: 3 (lower is better)
Translates to: RHRQGHGKKMAI*RPRSEASGETN
Trigger: GTTGGTTTCTCCTGAGGCCTCGCTCCTTGGCCTGCAGATAGCCATCTTCTTGCCGTGTCCCTGTCTGTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CAA 90 bp CCTAGGTGGATGCTGCATGACTGGCCCTCAGACACACGGCAGACCATAACTCACATGGGAAACAAAGACTaGCTGGTAGGCAGCCACTGC +
Preference number: 3 (lower is better)
Translates to: PRWMLHDWPSDTRQTITHMGNKD*LVGSHC
Trigger: GCAGTGGCTGCCTACCAGCAAGTCTTTGTTTCCCAT...GTGAGTTATGGTCTGCCGTGTGTCTGAGGGCCAGTCATGCAGCATCCACCTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CAA 90 bp AACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACTCTTTGATCAGACCCTaGGACCCTCAAAGCCCCTGC +
Preference number: 3 (lower is better)
Translates to: NLDITTSRPYLPFWAEPNSLIRP*DPQSPC
Trigger: GCAGGGGCTTTGAGGGTCCAAGGGTCTGATCAAAGA...GTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR TCA 72 bp GCTGACCTGGAATGCTCATGGCCAGGCCTCTGCTCCTaGCAGAATGGGAAACAAAGACTTGCTGGTAGGCAG +
Preference number: 3 (lower is better)
Translates to: ADLECSWPGLCS*QNGKQRLAGRQ
Trigger: CTGCCTACCAGCAAGTCTTTGTTTCCCATTCTGTCAGGAGCAGAGGCCTGGCCATGAGCATTCCAGGTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR GCA 72 bp TGGCAACAAAGCCACTCTGAAAGGAGCTGTGTGCACTaGCTGTCTGGAAGGCCATGCCAGAGTCCATCGTTG +
Preference number: 3 (lower is better)
Translates to: WQQSHSERSCVH*LSGRPCQSPSL
Trigger: CAACGATGGACTCTGGCATGGCCTTCCAGACAGGCAGTGCACACAGCTCCTTTCAGAGTGGCTTTGTTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CCA 72 bp ATCCACTTCAGGTCCACTAAAGGGAGATGGGGAAGGTaGCCTGTCCAGAAGCCTGTGGGACAGGGTAAAGGT +
Preference number: 3 (lower is better)
Translates to: IHFRSTKGRWGR*PVQKPVGQGKG
Trigger: ACCTTTACCCTGTCCCACAGGCTTCTGGACAGGCCACCTTCCCCATCTCCCTTTAGTGGACCTGAAGTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CAA 90 bp ACACACTGCACACACTGGGCGGCTGTACCTGCCTATCCTGTGGTAAACTTGGCTATGGGAAACAAAGACTaGCTGGTAGGCAGCCACTGC +
Preference number: 3 (lower is better)
Translates to: THCTHWAAVPAYPVVNLAMGNKD*LVGSHC
Trigger: GCAGTGGCTGCCTACCAGCAAGTCTTTGTTTCCCAT...AGCCAAGTTTACCACAGGATAGGCAGGTACAGCCGCCCAGTGTGTGCAGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CAA 90 bp TCAAGGATGACAGCAGACCCCTCCCTTCTGCCGCAGTTACACTTACAGGTGGACAGGGACTTGAACTTCTaGTCCAAGCACCAGAGTGGG +
Preference number: 3 (lower is better)
Translates to: SRMTADPSLLPQLHLQVDRDLNF*SKHQSG
Trigger: CCCACTCTGGTGCTTGGACAAGAAGTTCAAGTCCCT...GTCCACCTGTAAGTGTAACTGCGGCAGAAGGGAGGGGTCTGCTGTCATCCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CAA 90 bp GGAGGGGAGGAGGCAAGGCCAACCTCCAGTCCCTGCTCTAAACCCCCATGTAGTAAACCTGAAAGGGACTaGAACTTCTTGTCCAAGCAC +
Preference number: 3 (lower is better)
Translates to: GGEEARPTSSPCSKPPCSKPERD*NFLSKH
Trigger: GTGCTTGGACAAGAAGTTCAAGTCCCTTTCAGGTTT...ACTACATGGGGGTTTAGAGCAGGGACTGGAGGTTGGCCTTGCCTCCTCCCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CAA 90 bp AACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCTTCTGCCAGCTCACTaGCTTTGCTACCAGGGCTAT +
Preference number: 3 (lower is better)
Translates to: NLDITTSRPYLPFWAEPNLLPAH*LCYQGY
Trigger: ATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAG...GTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR TCA 72 bp CTGTGGCTTCCTTTGGCCACAGAAATGGAAGTGGGGTaGCACACATTACTTGTGGCCTGCTGTGGCCTTTCC +
Preference number: 3 (lower is better)
Translates to: LWLPLATEMEVG*HTLLVACCGLS
Trigger: GGAAAGGCCACAGCAGGCCACAAGTAATGTGTGTCACCCCACTTCCATTTCTGTGGCCAAAGGAAGCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CCA 72 bp TCCATCGTTGCCTCCACCCTACCTGTGCAGGAAACCTaGACATCACCACTTCAAGGCCCTACCTTCCTTTCT +
Preference number: 3 (lower is better)
Translates to: SIVASTLPVQET*TSPLQGPTFLS
Trigger: AGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAGGTAGGGTGGAGGCAACGATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CCA 72 bp GATGATCAGCTGCTGCCGTCCTATGGAACTCAGGTGTaGCTCTGTGGCTTCCTTTGGCCACAGAAATGGAAG +
Preference number: 3 (lower is better)
Translates to: DDQLLPSYGTQV*LCGFLWPQKWK
Trigger: CTTCCATTTCTGTGGCCAAAGGAAGCCACAGAGCCACACCTGAGTTCCATAGGACGGCAGCAGCTGATCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CAA 90 bp CTGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGAGGAAACATCATTCTTaGCCAAGATGCTATCCCACT +
Preference number: 3 (lower is better)
Translates to: LSGRPCQSPSLPPPYLCRRKHHS*PRCYPT
Trigger: AGTGGGATAGCATCTTGGCAAAGAATGATGTTTCCT...CCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CAA 90 bp AGGGGCTCTGCTCATCACAGGCTATCAAGGATGACAGCAGACCCCTCCCTTCTGCTAGAAAACCCCTCCTaGTGTGGAACAGGTCTTTCT +
Preference number: 3 (lower is better)
Translates to: RGSAHHRLSRMTADPSLLLENPS*CGTGLS
Trigger: AGAAAGACCTGTTCCACACAAGGAGGGGTTTTCTAG...CAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR GCA 72 bp CTTGCATCCCACCTTCCTGCATCCAAACCTTCCAGCTaGCCAGAACTGCTGGTAATCCCACAGGAAACATCA +
Preference number: 3 (lower is better)
Translates to: LASHLPASKPSS*PELLVIPQETS
Trigger: TGATGTTTCCTGTGGGATTACCAGCAGTTCTGGGCAGCTGGAAGGTTTGGATGCAGGAAGGTGGGATGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR GCA 72 bp AAGCAGCTTGGTCATCATCTGTCTGAAAGCAGGTGCTaGAGCAGCTGGCAACAAAGCCACTCTGAAAGGAGC +
Preference number: 3 (lower is better)
Translates to: KQLGHHLSESRC*SSWQQSHSERS
Trigger: GCTCCTTTCAGAGTGGCTTTGTTGCCAGCTGCTGCAGCACCTGCTTTCAGACAGATGATGACCAAGCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR GCA 72 bp GGAAAGCAGCTTGGTCATCATCTGTCTGAAAGCAGGTaGTGCAGCAGCTGGCAACAAAGCCACTCTGAAAGG +
Preference number: 3 (lower is better)
Translates to: GKQLGHHLSESR*CSSWQQSHSER
Trigger: CCTTTCAGAGTGGCTTTGTTGCCAGCTGCTGCAGCACCTGCTTTCAGACAGATGATGACCAAGCTGCTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR GCA 72 bp ACACACATTACTTGTGGCCTGCTGTGGCCTTTCCCCTaGCTCAGTGAGCATGGAGAAATATGTCCAGGTAGG +
Preference number: 3 (lower is better)
Translates to: THITCGLLWPFP*LSEHGEICPGR
Trigger: CCTACCTGGACATATTTCTCCATGCTCACTGAGGCAGGGGAAAGGCCACAGCAGGCCACAAGTAATGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CCA 72 bp GGACAGGGTTCAAAAGAGAAGGCAGCAATCCCAGGCTaGAGTATCCACTTCAGGTCCACTAAAGGGAGATGG +
Preference number: 3 (lower is better)
Translates to: GQGSKEKAAIPG*SIHFRSTKGRW
Trigger: CCATCTCCCTTTAGTGGACCTGAAGTGGATACTCCAGCCTGGGATTGCTGCCTTCTCTTTTGAACCCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CAA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCCCCCACCCAGCTTCTTaGATCAGACCCTTGGACCCT +
Preference number: 3 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFPHPAS*IRPLDP
Trigger: AGGGTCCAAGGGTCTGATCAAAGAAGCTGGGTGGGG...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CAA 90 bp CAGTATGAGAAGGTCCACTTCTCCATACCTCCACAACTCTGGGCATCTAAAACTCCCCACCCAGCTTCTTaGATCAGACCCTTGGACCCT +
Preference number: 3 (lower is better)
Translates to: QYEKVHFSIPPQLWASKTPHPAS*IRPLDP
Trigger: AGGGTCCAAGGGTCTGATCAAAGAAGCTGGGTGGGG...AGTTTTAGATGCCCAGAGTTGTGGAGGTATGGAGAAGTGGACCTTCTCATACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CAA 90 bp CGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCAAGTGCCAGCTCACTTGCTTaGCTACCAGGGCTATACCTG +
Preference number: 3 (lower is better)
Translates to: RGHRCGQNYVPSIFLCSSASSLA*LPGLYL
Trigger: CAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCTGGC...ACTTGAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CAA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCACGCTGGGTGGCTGCTaGTACTTCTCCATACTGAGC +
Preference number: 3 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFTLGGC*YFSILS
Trigger: GCTCAGTATGGAGAAGTACAAGCAGCCACCCAGCGT...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR TCA 72 bp GAGGTGACAAAGATGATGCAACTATCTGCTGAGAGTTaGTCTACAAAACGACCCCCTCGTGGGAGCAGGCCT +
Preference number: 3 (lower is better)
Translates to: EVTKMMQLSAES*STKRPPRGSRP
Trigger: AGGCCTGCTCCCACGAGGGGGTCGTTTTGTAGATCAACTCTCAGCAGATAGTTGCATCATCTTTGTCACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR GCA 72 bp AACTGTAGCCGCTGCGCTGTTGGAGATCTTTGTTACTaGAGCACAATCTGGCTCATGCTGACTGATCCTGCA +
Preference number: 3 (lower is better)
Translates to: NCSRCAVGDLCY*STIWLMLTDPA
Trigger: TGCAGGATCAGTCAGCATGAGCCAGATTGTGCTGCAGTAACAAAGATCTCCAACAGCGCAGCGGCTACAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CAA 90 bp ACAGGTGGACTCAAGGTTGAATGTCAAAGGCAGAAAGTTACAACCTGGGAATACCCCCACCCAGCTTCTTaGATCAGACCCTTGGACCCT +
Preference number: 3 (lower is better)
Translates to: TGGLKVECQRQKVTTWEYPHPAS*IRPLDP
Trigger: AGGGTCCAAGGGTCTGATCAAAGAAGCTGGGTGGGG...GTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CAA 90 bp CCATATTTATTTGGCCCGTTTCAAAGTCCTCTATTCTCTGCTCATCTGTCCACATGCCAGAGTCCATCGTaGCCTCCACCCTACCTGTGC +
Preference number: 3 (lower is better)
Translates to: PYLFGPFQSPLFSAHLSTCQSPS*PPPYLC
Trigger: GCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCA...TGTGGACAGATGAGCAGAGAATAGAGGACTTTGAAACGGGCCAAATAAATATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CCA 72 bp TTCTTAAGTGAGAAACAGCATCCCATACAGCACAACTaGGCACTGCCTACTCAACAGCCAAGGCTTGGCCAT +
Preference number: 3 (lower is better)
Translates to: FLSEKQHPIQHN*ALPTQQPRLGH
Trigger: ATGGCCAAGCCTTGGCTGTTGAGTAGGCAGTGCCCAGTTGTGCTGTATGGGATGCTGTTTCTCACTTAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CAA 90 bp ACAGGTGGACTCAAGGTTGAATGTCAAAGGCAGAAAGTTACAACCTGGGAATACTCTTTGATCAGACCCTaGGACCCTCAAAGCCCCTGC +
Preference number: 3 (lower is better)
Translates to: TGGLKVECQRQKVTTWEYSLIRP*DPQSPC
Trigger: GCAGGGGCTTTGAGGGTCCAAGGGTCTGATCAAAGA...GTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR TCA 72 bp CCACACCTTGATCTCAGGCTTCTAGCTCCAGAATCATaGGGAAATGTCTGTTGTTTAAGTCCCCTAGCCTGC +
Preference number: 3 (lower is better)
Translates to: PHLDLRLLAPES*GNVCCLSPLAC
Trigger: GCAGGCTAGGGGACTTAAACAACAGACATTTCCTCATGATTCTGGAGCTAGAAGCCTGAGATCAAGGTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CAA 90 bp CGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCAAGTTTTAATGAGCACCAATaGTGTACCAGGCCACAGAGC +
Preference number: 3 (lower is better)
Translates to: RGHRCGQNYVPSIFLCSSFNEHQ*CTRPQS
Trigger: GCTCTGTGGCCTGGTACACAATTGGTGCTCATTAAA...ACTTGAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CAA 90 bp ACAGGTGGACTCAAGGTTGAATGTCAAAGGCAGAAAGTTACAACCTGGGAATACAGGGACTTGAACTTCTaGTCCAAGCACCAGAGTGGG +
Preference number: 3 (lower is better)
Translates to: TGGLKVECQRQKVTTWEYRDLNF*SKHQSG
Trigger: CCCACTCTGGTGCTTGGACAAGAAGTTCAAGTCCCT...GTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CAA 90 bp AGCTCACTTGCTTTGCTACCAGGGCTATACCTGCTTTCTAAAAATAGCTTCCCAAGGGACTTGAACTTCTaGTCCAAGCACCAGAGTGGG +
Preference number: 3 (lower is better)
Translates to: SSLALLPGLYLLSKNSFPRDLNF*SKHQSG
Trigger: CCCACTCTGGTGCTTGGACAAGAAGTTCAAGTCCCT...TGGGAAGCTATTTTTAGAAAGCAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CAA 90 bp CGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCAAGTTGCCTTGCTCCTTTATaGCTGGATCTTTGGGCTTTT +
Preference number: 3 (lower is better)
Translates to: RGHRCGQNYVPSIFLCSSCLAPL*LDLWAF
Trigger: AAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCA...ACTTGAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CCA 72 bp AGACAAAACCAGAGAAGCCTATCGCGGGCACCGCTGTaGGCAGAACTATGTCCCTTCAATATTTTTATGTTC +
Preference number: 3 (lower is better)
Translates to: RQNQRSLSRAPL*AELCPFNIFMF
Trigger: GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAGGCTTCTCTGGTTTTGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CAA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCTTTATTGCTGGATCTTaGGGCTTTTCCAGTTCTGCT +
Preference number: 3 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFFIAGS*GFSSSA
Trigger: AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAA...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CAA 90 bp CAGTATGAGAAGGTCCACTTCTCCATACCTCCACAACTCTGGGCATCTAAAACTAGGAAACATCATTCTTaGCCAAGATGCTATCCCACT +
Preference number: 3 (lower is better)
Translates to: QYEKVHFSIPPQLWASKTRKHHS*PRCYPT
Trigger: AGTGGGATAGCATCTTGGCAAAGAATGATGTTTCCT...AGTTTTAGATGCCCAGAGTTGTGGAGGTATGGAGAAGTGGACCTTCTCATACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CAA 90 bp CCATATTTATTTGGCCCGTTTCAAAGTCCTCTATTCTCTGCTCATCTGTCCACACTAGAAAACCCCTCCTaGTGTGGAACAGGTCTTTCT +
Preference number: 3 (lower is better)
Translates to: PYLFGPFQSPLFSAHLSTLENPS*CGTGLS
Trigger: AGAAAGACCTGTTCCACACAAGGAGGGGTTTTCTAG...TGTGGACAGATGAGCAGAGAATAGAGGACTTTGAAACGGGCCAAATAAATATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR TCA 72 bp TTCTGCCGCAGTTACACTTACAGGTGGACTCAAGGTTaGATGTCAAAGGCAGAAAGTTACAACCTGGGAATA +
Preference number: 3 (lower is better)
Translates to: FCRSYTYRWTQG*MSKAESYNLGI
Trigger: TATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGTAAGTGTAACTGCGGCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CAA 90 bp CTTTATTTGCCTTGCTCCTTTATTGCTGGATCTTTGGGCTTTTCCAGTTCTGCTAAACCTGAAAGGGACTaGAACTTCTTGTCCAAGCAC +
Preference number: 3 (lower is better)
Translates to: LYLPCSFIAGSLGFSSSAKPERD*NFLSKH
Trigger: GTGCTTGGACAAGAAGTTCAAGTCCCTTTCAGGTTT...AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCAAATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CAA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCTGCATGTGCCTAGAATaGTTACGTGGTCAAATTATA +
Preference number: 3 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFCMCLE*LRGQII
Trigger: TATAATTTGACCACGTAACAATTCTAGGCACATGCA...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR GCA 72 bp ACTGAAAATGGGTTTCTTCTGCCAGCTCACTTGCTTTaGTACCAGGGCTATACCTGCTTTCTAAAAATAGCT +
Preference number: 3 (lower is better)
Translates to: TENGFLLPAHLL*YQGYTCFLKIA
Trigger: AGCTATTTTTAGAAAGCAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CAA 90 bp CAGTATGAGAAGGTCCACTTCTCCATACCTCCACAACTCTGGGCATCTAAAACTAATTTCCATATTTATTaGGCCCGTTTCAAAGTCCTC +
Preference number: 3 (lower is better)
Translates to: QYEKVHFSIPPQLWASKTNFHIY*ARFKVL
Trigger: GAGGACTTTGAAACGGGCCAAATAAATATGGAAATT...AGTTTTAGATGCCCAGAGTTGTGGAGGTATGGAGAAGTGGACCTTCTCATACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CCA 72 bp GGAATATGTACTGGCATAAAGAGTGAGGCACATACATaGCTTTACTATTTTCCAGAGGGCCAACTGCTTTTA +
Preference number: 3 (lower is better)
Translates to: GICTGIKSEAHT*LYYFPEGQLLL
Trigger: TAAAAGCAGTTGGCCCTCTGGAAAATAGTAAAGCCATGTATGTGCCTCACTCTTTATGCCAGTACATATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CCA 72 bp AGGGTAACAGCTTTATTTGCCTTGCTCCTTTATTGCTaGATCTTTGGGCTTTTCCAGTTCTGCTGTTCAAAA +
Preference number: 3 (lower is better)
Translates to: RVTALFALLLYC*IFGLFQFCCSK
Trigger: TTTTGAACAGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCAAATAAAGCTGTTACCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR-3UTR CAA 90 bp CTTTATTTGCCTTGCTCCTTTATTGCTGGATCTTTGGGCTTTTCCAGTTCTGCTTTCCAAGGTTTCCAGTaGTTTTACCTACAAGGTATC +
Preference number: 3 (lower is better)
Translates to: LYLPCSFIAGSLGFSSSAFQGFQ*FYLQGI
Trigger: GATACCTTGTAGGTAAAACAACTGGAAACCTTGGAA...AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCAAATAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CCA 72 bp AGTAGTCACAGCATGCATGTGCCTAGAATTGTTACGTaGTCAAATTATATTATTGTGTATTCCCACCAACAG +
Preference number: 3 (lower is better)
Translates to: SSHSMHVPRIVT*SNYIIVYSHQQ
Trigger: CTGTTGGTGGGAATACACAATAATATAATTTGACCACGTAACAATTCTAGGCACATGCATGCTGTGACTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR GCA 72 bp AGTCCTCTATTCTCTGCTCATCTGTCCACATCTAAGTaGTTTAACTATTGTGGCTTTATAAAATATTCCAAT +
Preference number: 3 (lower is better)
Translates to: SPLFSAHLSTSK*FNYCGFIKYSN
Trigger: ATTGGAATATTTTATAAAGCCACAATAGTTAAAGCACTTAGATGTGGACAGATGAGCAGAGAATAGAGGACT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CAAAACGACCCCCTCGTGGGAGCAGGCCTGGGTGAGACGGCACTCCCAGAAGACGGGGCTGCCCAGGCCTaGGCTCGGCCTGTTAGGCGC +
Preference number: 4 (lower is better)
Translates to: QNDPLVGAGLGETALPEDGAAQA*ARPVRR
Trigger: GCGCCTAACAGGCCGAGCCCAGGCCTGGGCAGCCCC...GTCTTCTGGGAGTGCCGTCTCACCCAGGCCTGCTCCCACGAGGGGGTCGTTTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CAAAACGACCCCCTCGTGGGAGCAGGCCTGGGTGAGACGGCACTCCCAGAAGACGGGGCCACTGGCAGCTaGCTGGAGGCCAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: QNDPLVGAGLGETALPEDGATGS*LEARGR
Trigger: CCTGCCCCTGGCCTCCAGCCAGCTGCCAGTGGCCCC...GTCTTCTGGGAGTGCCGTCTCACCCAGGCCTGCTCCCACGAGGGGGTCGTTTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CAAAACGACCCCCTCGTGGGAGCAGGCCTGGGTGAGACGGCACTCCCAGAAGACCACTGCGACCCAGGCTaGGGCTCCGAGTGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: QNDPLVGAGLGETALPEDHCDPG*GSECPS
Trigger: AGAGGGGCACTCGGAGCCCCAGCCTGGGTCGCAGTG...GTCTTCTGGGAGTGCCGTCTCACCCAGGCCTGCTCCCACGAGGGGGTCGTTTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328554.9
ENST00000405640.1
CDS-3UTR CCA 90 bp AGCAGGGAAAGGGCACAGGGCGGAGGTCAAGCTCTGCTGGAGTTGGGGGAGCTGCAGCTGAGGGGCCACTaGCAGCTGGCTGGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: SRERAQGGGQALLELGELQLRGH*QLAGGQ
Trigger: CTGGCCTCCAGCCAGCTGCCAGTGGCCCCTCAGCTG...CAGCTCCCCCAACTCCAGCAGAGCTTGACCTCCGCCCTGTGCCCTTTCCCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp TGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGAATGCGAGGGCCCTGCTaGCGGCACCGGCCACGAGGC +
Preference number: 4 (lower is better)
Translates to: CLEGHARVHRCLHPTCAGMRGPC*RHRPRG
Trigger: GCCTCGTGGCCGGTGCCGTCAGCAGGGCCCTCGCAT...TCCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AGCAGGGAAAGGGCACAGGGCGGAGGTCAAGCTCTGCTGGAGTTGGGGGAGCTGTGGCGGCTGCCCAGATaGGAATGCGAGGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: SRERAQGGGQALLELGELWRLPR*ECEGPA
Trigger: AGCAGGGCCCTCGCATTCCCATCTGGGCAGCCGCCA...CAGCTCCCCCAACTCCAGCAGAGCTTGACCTCCGCCCTGTGCCCTTTCCCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp GGAGGGGAGGAGGCAAGGCCAACCTCCAGTCCCTGCTCTAAACCCCCATGTAGTCTCCCGCCTCCACACTaGCCCTCTTGCCGGAGTCGG +
Preference number: 4 (lower is better)
Translates to: GGEEARPTSSPCSKPPCSLPPPH*PSCRSR
Trigger: CCGACTCCGGCAAGAGGGTCAGTGTGGAGGCGGGAG...ACTACATGGGGGTTTAGAGCAGGGACTGGAGGTTGGCCTTGCCTCCTCCCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328554.9
ENST00000405640.1
CDS-3UTR TCA 90 bp AGCAGGGAAAGGGCACAGGGCGGAGGTCAAGCTCTGCTGGAGTTGGGGGAGCTGGACACCACTCTGCTCTaGCTGGGGACTATGGGGCGC +
Preference number: 4 (lower is better)
Translates to: SRERAQGGGQALLELGELDTTLL*LGTMGR
Trigger: GCGCCCCATAGTCCCCAGTCAGAGCAGAGTGGTGTC...CAGCTCCCCCAACTCCAGCAGAGCTTGACCTCCGCCCTGTGCCCTTTCCCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp AGCAGGGAAAGGGCACAGGGCGGAGGTCAAGCTCTGCTGGAGTTGGGGGAGCTGTGCCAGACCCACAGGTaGGCCAGGCCACAGTGCACT +
Preference number: 4 (lower is better)
Translates to: SRERAQGGGQALLELGELCQTHR*ARPQCT
Trigger: AGTGCACTGTGGCCTGGCTCACCTGTGGGTCTGGCA...CAGCTCCCCCAACTCCAGCAGAGCTTGACCTCCGCCCTGTGCCCTTTCCCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp AGCAGGGAAAGGGCACAGGGCGGAGGTCAAGCTCTGCTGGAGTTGGGGGAGCTGCCTTGGGCCCAGGGGTaGTCTCCTTGGTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SRERAQGGGQALLELGELPWAQG*SPWSAA
Trigger: AGCAGCTGACCAAGGAGAGCACCCCTGGGCCCAAGG...CAGCTCCCCCAACTCCAGCAGAGCTTGACCTCCGCCCTGTGCCCTTTCCCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp AGCAGGGAAAGGGCACAGGGCGGAGGTCAAGCTCTGCTGGAGTTGGGGGAGCTGGACAGGTGTGGGGGCTaGCTCCTCTGGCTGGGAAGA +
Preference number: 4 (lower is better)
Translates to: SRERAQGGGQALLELGELDRCGG*LLWLGR
Trigger: TCTTCCCAGCCAGAGGAGGCAGCCCCCACACCTGTC...CAGCTCCCCCAACTCCAGCAGAGCTTGACCTCCGCCCTGTGCCCTTTCCCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp GGAGGGGAGGAGGCAAGGCCAACCTCCAGTCCCTGCTCTAAACCCCCATGTAGTCAGGCGCCACCCTCTTaGCGGAGTCGGGAACGCCTG +
Preference number: 4 (lower is better)
Translates to: GGEEARPTSSPCSKPPCSQAPPS*RSRERL
Trigger: CAGGCGTTCCCGACTCCGGCAAGAGGGTGGCGCCTG...ACTACATGGGGGTTTAGAGCAGGGACTGGAGGTTGGCCTTGCCTCCTCCCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407472.5
CDS-3UTR CCA 90 bp CAAAACGACCCCCTCGTGGGAGCAGGCCTGGGTGAGACGGCACTCCCAGAAGACGGCCACGAGGCATGCTaGGAGCACAGGGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: QNDPLVGAGLGETALPEDGHEAC*EHRGEE
Trigger: CTCTTCTCCCCTGTGCTCCCAGCATGCCTCGTGGCC...GTCTTCTGGGAGTGCCGTCTCACCCAGGCCTGCTCCCACGAGGGGGTCGTTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CAAAACGACCCCCTCGTGGGAGCAGGCCTGGGTGAGACGGCACTCCCAGAAGACCCCAGGAGAAAGTGGTaGCTCTCCTGGGGTCTCCGG +
Preference number: 4 (lower is better)
Translates to: QNDPLVGAGLGETALPEDPRRKW*LSWGLR
Trigger: CCGGAGACCCCAGGAGAGCCACCACTTTCTCCTGGG...GTCTTCTGGGAGTGCCGTCTCACCCAGGCCTGCTCCCACGAGGGGGTCGTTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp TCAAGGATGACAGCAGACCCCTCCCTTCTGCCGCAGTTACACTTACAGGTGGACGGACGGGCCTCCCTCTaGGGGCGAGAGTCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: SRMTADPSLLPQLHLQVDGRASL*GRESRR
Trigger: GCGCCTGGACTCTCGCCCTCAGAGGGAGGCCCGTCC...GTCCACCTGTAAGTGTAACTGCGGCAGAAGGGAGGGGTCTGCTGTCATCCTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp AACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACATGCGAGGGCCCTGCTaGCGGCACCGGCCACGAGGC +
Preference number: 4 (lower is better)
Translates to: NLDITTSRPYLPFWAEPNMRGPC*RHRPRG
Trigger: GCCTCGTGGCCGGTGCCGTCAGCAGGGCCCTCGCAT...GTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp ACACACTGCACACACTGGGCGGCTGTACCTGCCTATCCTGTGGTAAACTTGGCTATGCGAGGGCCCTGCTaGCGGCACCGGCCACGAGGC +
Preference number: 4 (lower is better)
Translates to: THCTHWAAVPAYPVVNLAMRGPC*RHRPRG
Trigger: GCCTCGTGGCCGGTGCCGTCAGCAGGGCCCTCGCAT...AGCCAAGTTTACCACAGGATAGGCAGGTACAGCCGCCCAGTGTGTGCAGTGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CTGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGTCGTCAGCACAGGTCTaGCAGGCCCCAGCCACGGTG +
Preference number: 4 (lower is better)
Translates to: LSGRPCQSPSLPPPYLCRSSAQV*QAPATV
Trigger: CACCGTGGCTGGGGCCTGTCAGACCTGTGCTGACGA...CCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp GGCAAGGGGCTTGCATCCCACCTTCCTGCATCCAAACCTTCCAGCTGCCCAGAAGCAGACCGAAGGCACTaGGACCCAGGCTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: GKGLASHLPASKPSSCPEADRRH*DPGWGS
Trigger: GGAGCCCCAGCCTGGGTCGCAGTGCCTTCGGTCTGC...TTCTGGGCAGCTGGAAGGTTTGGATGCAGGAAGGTGGGATGCAAGCCCCTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328554.9
ENST00000405640.1
CDS-3UTR CCA 90 bp CTGTGCAGGAAACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCGGGGCTGCCCAGGCCTaGGCTCGGCCTGTTAGGCGC +
Preference number: 4 (lower is better)
Translates to: LCRKPGHHHFKALPSFLGGAAQA*ARPVRR
Trigger: GCGCCTAACAGGCCGAGCCCAGGCCTGGGCAGCCCC...GCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CAAAACGACCCCCTCGTGGGAGCAGGCCTGGGTGAGACGGCACTCCCAGAAGACACCTCCTGGATGAGCTaGGTCTGGTCTCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: QNDPLVGAGLGETALPEDTSWMS*VWSLGR
Trigger: CCTGCCCAGAGACCAGACCCAGCTCATCCAGGAGGT...GTCTTCTGGGAGTGCCGTCTCACCCAGGCCTGCTCCCACGAGGGGGTCGTTTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AGCAGGGAAAGGGCACAGGGCGGAGGTCAAGCTCTGCTGGAGTTGGGGGAGCTGAAAACGACCCCCTCGTaGGAGCAGGCCTGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: SRERAQGGGQALLELGELKTTPS*EQAWVR
Trigger: TCTCACCCAGGCCTGCTCCCACGAGGGGGTCGTTTT...CAGCTCCCCCAACTCCAGCAGAGCTTGACCTCCGCCCTGTGCCCTTTCCCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AGCAGGGAAAGGGCACAGGGCGGAGGTCAAGCTCTGCTGGAGTTGGGGGAGCTGCCAACAGGGCAGACGTaGCAGACCCAGTTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: SRERAQGGGQALLELGELPTGQT*QTQFSP
Trigger: GGGACTGAACTGGGTCTGCCACGTCTGCCCTGTTGG...CAGCTCCCCCAACTCCAGCAGAGCTTGACCTCCGCCCTGTGCCCTTTCCCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AGCAGGGAAAGGGCACAGGGCGGAGGTCAAGCTCTGCTGGAGTTGGGGGAGCTGGGGAGATGGGGAAGGTaGCCTGTCCAGAAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: SRERAQGGGQALLELGELGRWGR*PVQKPV
Trigger: CACAGGCTTCTGGACAGGCCACCTTCCCCATCTCCC...CAGCTCCCCCAACTCCAGCAGAGCTTGACCTCCGCCCTGTGCCCTTTCCCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CAAAACGACCCCCTCGTGGGAGCAGGCCTGGGTGAGACGGCACTCCCAGAAGACGGGAGATGGGGAAGGTaGCCTGTCCAGAAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: QNDPLVGAGLGETALPEDGRWGR*PVQKPV
Trigger: CACAGGCTTCTGGACAGGCCACCTTCCCCATCTCCC...GTCTTCTGGGAGTGCCGTCTCACCCAGGCCTGCTCCCACGAGGGGGTCGTTTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp TGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGAGGCCTGTTAGGCGCCTaGGGATCTCGCAGACACGGC +
Preference number: 4 (lower is better)
Translates to: CLEGHARVHRCLHPTCAGGLLGA*GSRRHG
Trigger: GCCGTGTCTGCGAGATCCTCAGGCGCCTAACAGGCC...TCCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CTCTGCTGGAGTTGGGGGAGCTGGTTCTGCTCAGCGCAGAGTCCAAAACAAGCGGGGAGCAGGCCTGGGTaGGACGGCACTCCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: LCWSWGSWFCSAQSPKQAGSRPG*DGTPRR
Trigger: TCTTCTGGGAGTGCCGTCTCACCCAGGCCTGCTCCC...CGCTTGTTTTGGACTCTGCGCTGAGCAGAACCAGCTCCCCCAACTCCAGCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp AGCAGGGAAAGGGCACAGGGCGGAGGTCAAGCTCTGCTGGAGTTGGGGGAGCTGCATCAGGGAGCAGTCTaGCCCAACCCACAAAAGGGG +
Preference number: 4 (lower is better)
Translates to: SRERAQGGGQALLELGELHQGAV*PNPQKG
Trigger: CCCCTTTTGTGGGTTGGGTCAGACTGCTCCCTGATG...CAGCTCCCCCAACTCCAGCAGAGCTTGACCTCCGCCCTGTGCCCTTTCCCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp GGCAAGGGGCTTGCATCCCACCTTCCTGCATCCAAACCTTCCAGCTGCCCAGAAAGGCTCTGCAGCTCCTaGGCACCCTGCCTTCGGGTC +
Preference number: 4 (lower is better)
Translates to: GKGLASHLPASKPSSCPERLCSS*APCLRV
Trigger: GACCCGAAGGCAGGGTGCTCAGGAGCTGCAGAGCCT...TTCTGGGCAGCTGGAAGGTTTGGATGCAGGAAGGTGGGATGCAAGCCCCTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp AGCAGGGAAAGGGCACAGGGCGGAGGTCAAGCTCTGCTGGAGTTGGGGGAGCTGGGCATAATTGGCGGCTaGCCAGATGGGAATGCGAGG +
Preference number: 4 (lower is better)
Translates to: SRERAQGGGQALLELGELGIIGG*PDGNAR
Trigger: CCTCGCATTCCCATCTGGGCAGCCGCCAATTATGCC...CAGCTCCCCCAACTCCAGCAGAGCTTGACCTCCGCCCTGTGCCCTTTCCCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp GGAGGGGAGGAGGCAAGGCCAACCTCCAGTCCCTGCTCTAAACCCCCATGTAGTCCTTGGGCCCAGGGGTaGTCTCCTTGGTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GGEEARPTSSPCSKPPCSPWAQG*SPWSAA
Trigger: AGCAGCTGACCAAGGAGAGCACCCCTGGGCCCAAGG...ACTACATGGGGGTTTAGAGCAGGGACTGGAGGTTGGCCTTGCCTCCTCCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CAAAACGACCCCCTCGTGGGAGCAGGCCTGGGTGAGACGGCACTCCCAGAAGACCACACAAAGGGCGAATaGCTGCAGCTGAGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: QNDPLVGAGLGETALPEDHTKGE*LQLSLA
Trigger: TGCCAGGCTCAGCTGCAGGCATTCGCCCTTTGTGTG...GTCTTCTGGGAGTGCCGTCTCACCCAGGCCTGCTCCCACGAGGGGGTCGTTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp AGCAGGGAAAGGGCACAGGGCGGAGGTCAAGCTCTGCTGGAGTTGGGGGAGCTGCACACAAAGGGCGAATaGCTGCAGCTGAGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: SRERAQGGGQALLELGELHTKGE*LQLSLA
Trigger: TGCCAGGCTCAGCTGCAGGCATTCGCCCTTTGTGTG...CAGCTCCCCCAACTCCAGCAGAGCTTGACCTCCGCCCTGTGCCCTTTCCCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CATACAGGAACGAGGTCCCAACAGGGCAGACGTGGCAGACCCAGTTCAGTCCCACCCTGCCTTCGGGTCTaGCAGTGTGTGGGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: HTGTRSQQGRRGRPSSVPPCLRV*QCVGAR
Trigger: TCTGGCCCCCACACACTGGCAGACCCGAAGGCAGGG...TGGGACTGAACTGGGTCTGCCACGTCTGCCCTGTTGGGACCTCGTTCCTGTATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTCTGCTGGAGTTGGGGGAGCTGGTTCTGCTCAGCGCAGAGTCCAAAACAAGCGTGTGGGGTCGGGAGCTaGGCATGTGCCCAGCTAGGG +
Preference number: 4 (lower is better)
Translates to: LCWSWGSWFCSAQSPKQACGVGS*ACAQLG
Trigger: CCCTAGCTGGGCACATGCCCAGCTCCCGACCCCACA...CGCTTGTTTTGGACTCTGCGCTGAGCAGAACCAGCTCCCCCAACTCCAGCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp GGAGGGGAGGAGGCAAGGCCAACCTCCAGTCCCTGCTCTAAACCCCCATGTAGTCAGAAGTCCACCCTGTaGGGTCGGGAGCTGGGCATG +
Preference number: 4 (lower is better)
Translates to: GGEEARPTSSPCSKPPCSQKSTL*GRELGM
Trigger: CATGCCCAGCTCCCGACCCCACAGGGTGGACTTCTG...ACTACATGGGGGTTTAGAGCAGGGACTGGAGGTTGGCCTTGCCTCCTCCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp GGAGGGGAGGAGGCAAGGCCAACCTCCAGTCCCTGCTCTAAACCCCCATGTAGTCAGCAGGGGTGGCCATaGCGGCTGGTAAAGACCTGG +
Preference number: 4 (lower is better)
Translates to: GGEEARPTSSPCSKPPCSQQGWP*RLVKTW
Trigger: CCAGGTCTTTACCAGCCGCCATGGCCACCCCTGCTG...ACTACATGGGGGTTTAGAGCAGGGACTGGAGGTTGGCCTTGCCTCCTCCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGCAGCAGGGGTGGCCATaGCGGCTGGTAAAGACCTGG +
Preference number: 4 (lower is better)
Translates to: LSGRPCQSPSLPPPYLCRQQGWP*RLVKTW
Trigger: CCAGGTCTTTACCAGCCGCCATGGCCACCCCTGCTG...CCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp TGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGAAAGTGGTGGCTCTCCTaGGGTCTCCGGGGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: CLEGHARVHRCLHPTCAGKWWLS*GLRGLH
Trigger: GTGGAGGCCCCGGAGACCCCAGGAGAGCCACCACTT...TCCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp GGCAAGGGGCTTGCATCCCACCTTCCTGCATCCAAACCTTCCAGCTGCCCAGAAAAGTGGTGGCTCTCCTaGGGTCTCCGGGGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: GKGLASHLPASKPSSCPEKWWLS*GLRGLH
Trigger: GTGGAGGCCCCGGAGACCCCAGGAGAGCCACCACTT...TTCTGGGCAGCTGGAAGGTTTGGATGCAGGAAGGTGGGATGCAAGCCCCTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp GGCAAGGGGCTTGCATCCCACCTTCCTGCATCCAAACCTTCCAGCTGCCCAGAAAGGCCCCAGCCACGGTaGCCCACAGGTGCAAGCAAG +
Preference number: 4 (lower is better)
Translates to: GKGLASHLPASKPSSCPERPQPR*PTGASK
Trigger: CTTGCTTGCACCTGTGGGCCACCGTGGCTGGGGCCT...TTCTGGGCAGCTGGAAGGTTTGGATGCAGGAAGGTGGGATGCAAGCCCCTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AGCAGGGAAAGGGCACAGGGCGGAGGTCAAGCTCTGCTGGAGTTGGGGGAGCTGCAACCAGCCCCACGCTaGGTGGCTGCTTGTACTTCT +
Preference number: 4 (lower is better)
Translates to: SRERAQGGGQALLELGELQPAPR*VAACTS
Trigger: AGAAGTACAAGCAGCCACCCAGCGTGGGGCTGGTTG...CAGCTCCCCCAACTCCAGCAGAGCTTGACCTCCGCCCTGTGCCCTTTCCCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp TCAAGGATGACAGCAGACCCCTCCCTTCTGCCGCAGTTACACTTACAGGTGGACCTCCCGCCTCCACACTaGCCCTCTTGCCGGAGTCGG +
Preference number: 4 (lower is better)
Translates to: SRMTADPSLLPQLHLQVDLPPPH*PSCRSR
Trigger: CCGACTCCGGCAAGAGGGTCAGTGTGGAGGCGGGAG...GTCCACCTGTAAGTGTAACTGCGGCAGAAGGGAGGGGTCTGCTGTCATCCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328554.9
ENST00000405640.1
CDS-3UTR TCA 90 bp CCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCAGGCCTGTTAGGCGCCTaGGGATCTCGCAGACACGGC +
Preference number: 4 (lower is better)
Translates to: PGHHHFKALPSFLGRAQPGLLGA*GSRRHG
Trigger: GCCGTGTCTGCGAGATCCTCAGGCGCCTAACAGGCC...TGGTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp GGAGGGGAGGAGGCAAGGCCAACCTCCAGTCCCTGCTCTAAACCCCCATGTAGTACCATGGCCCGTCCCTaGGCATGTCCAGCAAACCCT +
Preference number: 4 (lower is better)
Translates to: GGEEARPTSSPCSKPPCSTMARP*ACPANP
Trigger: AGGGTTTGCTGGACATGCTCAGGGACGGGCCATGGT...ACTACATGGGGGTTTAGAGCAGGGACTGGAGGTTGGCCTTGCCTCCTCCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CAAAACGACCCCCTCGTGGGAGCAGGCCTGGGTGAGACGGCACTCCCAGAAGACCTGGCTCATGCTGACTaGTCCTGCAGGGTAACAGCT +
Preference number: 4 (lower is better)
Translates to: QNDPLVGAGLGETALPEDLAHAD*SCRVTA
Trigger: AGCTGTTACCCTGCAGGATCAGTCAGCATGAGCCAG...GTCTTCTGGGAGTGCCGTCTCACCCAGGCCTGCTCCCACGAGGGGGTCGTTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CCTAGGTGGATGCTGCATGACTGGCCCTCAGACACACGGCAGACCATAACTCACCTGCCCAGATGGGAATaGGAGGGCCCTGCTGACGGC +
Preference number: 4 (lower is better)
Translates to: PRWMLHDWPSDTRQTITHLPRWE*EGPADG
Trigger: GCCGTCAGCAGGGCCCTCGCATTCCCATCTGGGCAG...GTGAGTTATGGTCTGCCGTGTGTCTGAGGGCCAGTCATGCAGCATCCACCTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCACTGCCCAGATGGGAATaGGAGGGCCCTGCTGACGGC +
Preference number: 4 (lower is better)
Translates to: PGHHHFKALPSFLGRAQPLPRWE*EGPADG
Trigger: GCCGTCAGCAGGGCCCTCGCATTCCCATCTGGGCAG...TGGTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp AGCAGGGAAAGGGCACAGGGCGGAGGTCAAGCTCTGCTGGAGTTGGGGGAGCTGTGGGGGAGCTGGTTCTaGTCAGCGCAGAGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: SRERAQGGGQALLELGELWGSWF*SAQSPK
Trigger: TTTTGGACTCTGCGCTGAGCAGAACCAGCTCCCCCA...CAGCTCCCCCAACTCCAGCAGAGCTTGACCTCCGCCCTGTGCCCTTTCCCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp GGAGGGGAGGAGGCAAGGCCAACCTCCAGTCCCTGCTCTAAACCCCCATGTAGTCGCAATGCATGCGAGTaGGGAGTGAGCAGGGGATGG +
Preference number: 4 (lower is better)
Translates to: GGEEARPTSSPCSKPPCSRNACE*GVSRGW
Trigger: CCATCCCCTGCTCACTCCGCACTCGCATGCATTGCG...ACTACATGGGGGTTTAGAGCAGGGACTGGAGGTTGGCCTTGCCTCCTCCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp AGCAGGGAAAGGGCACAGGGCGGAGGTCAAGCTCTGCTGGAGTTGGGGGAGCTGACAGCTCTGGACTGCTaGCTGGTCCTCACTTCACCT +
Preference number: 4 (lower is better)
Translates to: SRERAQGGGQALLELGELTALDC*LVLTSP
Trigger: AGGTGAAGTGAGGACCAGGCAGCAGTCCAGAGCTGT...CAGCTCCCCCAACTCCAGCAGAGCTTGACCTCCGCCCTGTGCCCTTTCCCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp AGCAGGGAAAGGGCACAGGGCGGAGGTCAAGCTCTGCTGGAGTTGGGGGAGCTGCTCACAGCTCTGGACTaGTGCCTGGTCCTCACTTCA +
Preference number: 4 (lower is better)
Translates to: SRERAQGGGQALLELGELLTALD*CLVLTS
Trigger: TGAAGTGAGGACCAGGCAGCAGTCCAGAGCTGTGAG...CAGCTCCCCCAACTCCAGCAGAGCTTGACCTCCGCCCTGTGCCCTTTCCCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp AGCAGGGAAAGGGCACAGGGCGGAGGTCAAGCTCTGCTGGAGTTGGGGGAGCTGCCTCCACCCTACCTGTaGAGGAAACCTGGACATCAC +
Preference number: 4 (lower is better)
Translates to: SRERAQGGGQALLELGELPPPYL*RKPGHH
Trigger: GTGATGTCCAGGTTTCCTGCACAGGTAGGGTGGAGG...CAGCTCCCCCAACTCCAGCAGAGCTTGACCTCCGCCCTGTGCCCTTTCCCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CCTAGGTGGATGCTGCATGACTGGCCCTCAGACACACGGCAGACCATAACTCACCCCTGCCTTCGGGTCTaGCAGTGTGTGGGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: PRWMLHDWPSDTRQTITHPCLRV*QCVGAR
Trigger: TCTGGCCCCCACACACTGGCAGACCCGAAGGCAGGG...GTGAGTTATGGTCTGCCGTGTGTCTGAGGGCCAGTCATGCAGCATCCACCTAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp GGCAAGGGGCTTGCATCCCACCTTCCTGCATCCAAACCTTCCAGCTGCCCAGAATTGCCCTGGGATGGATaGAGGCCCCTCCCATCCTCC +
Preference number: 4 (lower is better)
Translates to: GKGLASHLPASKPSSCPELPWDG*RPLPSS
Trigger: GGAGGATGGGAGGGGCCTGCATCCATCCCAGGGCAA...TTCTGGGCAGCTGGAAGGTTTGGATGCAGGAAGGTGGGATGCAAGCCCCTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CAAAACGACCCCCTCGTGGGAGCAGGCCTGGGTGAGACGGCACTCCCAGAAGACAGCACAACTGGGCACTaGCTACTCAACAGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: QNDPLVGAGLGETALPEDSTTGH*LLNSQG
Trigger: GCCTTGGCTGTTGAGTAGGCAGTGCCCAGTTGTGCT...GTCTTCTGGGAGTGCCGTCTCACCCAGGCCTGCTCCCACGAGGGGGTCGTTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp TCAAGGATGACAGCAGACCCCTCCCTTCTGCCGCAGTTACACTTACAGGTGGACCACTGCGACCCAGGCTaGGGCTCCGAGTGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: SRMTADPSLLPQLHLQVDHCDPG*GSECPS
Trigger: AGAGGGGCACTCGGAGCCCCAGCCTGGGTCGCAGTG...GTCCACCTGTAAGTGTAACTGCGGCAGAAGGGAGGGGTCTGCTGTCATCCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328554.9
ENST00000405640.1
CDS-3UTR CCA 90 bp CAAAACGACCCCCTCGTGGGAGCAGGCCTGGGTGAGACGGCACTCCCAGAAGACGGGTGTGGACAGATGTaGCTTGCACGACACAACAGG +
Preference number: 4 (lower is better)
Translates to: QNDPLVGAGLGETALPEDGCGQM*LARHNR
Trigger: CCTGTTGTGTCGTGCAAGCCACATCTGTCCACACCC...GTCTTCTGGGAGTGCCGTCTCACCCAGGCCTGCTCCCACGAGGGGGTCGTTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp TGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGAGGCCACGAGGCATGCTaGGAGCACAGGGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: CLEGHARVHRCLHPTCAGGHEAC*EHRGEE
Trigger: CTCTTCTCCCCTGTGCTCCCAGCATGCCTCGTGGCC...TCCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AGGGGCTCTGCTCATCACAGGCTATCAAGGATGACAGCAGACCCCTCCCTTCTGTGTGGGGTCGGGAGCTaGGCATGTGCCCAGCTAGGG +
Preference number: 4 (lower is better)
Translates to: RGSAHHRLSRMTADPSLLCGVGS*ACAQLG
Trigger: CCCTAGCTGGGCACATGCCCAGCTCCCGACCCCACA...CAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTCTGCTGGAGTTGGGGGAGCTGGTTCTGCTCAGCGCAGAGTCCAAAACAAGCGCAGCAGGGGTGGCCATaGCGGCTGGTAAAGACCTGG +
Preference number: 4 (lower is better)
Translates to: LCWSWGSWFCSAQSPKQAQQGWP*RLVKTW
Trigger: CCAGGTCTTTACCAGCCGCCATGGCCACCCCTGCTG...CGCTTGTTTTGGACTCTGCGCTGAGCAGAACCAGCTCCCCCAACTCCAGCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CCTAGGTGGATGCTGCATGACTGGCCCTCAGACACACGGCAGACCATAACTCACGGGGGCTGCCTCCTCTaGCTGGGAAGAGGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: PRWMLHDWPSDTRQTITHGGCLL*LGRGWF
Trigger: GAACCAGCCTCTTCCCAGCCAGAGGAGGCAGCCCCC...GTGAGTTATGGTCTGCCGTGTGTCTGAGGGCCAGTCATGCAGCATCCACCTAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGACCTCCTGGATGAGCTaGGTCTGGTCTCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LSGRPCQSPSLPPPYLCRTSWMS*VWSLGR
Trigger: CCTGCCCAGAGACCAGACCCAGCTCATCCAGGAGGT...CCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CAAAACGACCCCCTCGTGGGAGCAGGCCTGGGTGAGACGGCACTCCCAGAAGACGGGTTTTGGACCTCCTaGATGAGCTGGGTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: QNDPLVGAGLGETALPEDGFWTS*MSWVWS
Trigger: AGACCAGACCCAGCTCATCCAGGAGGTCCAAAACCC...GTCTTCTGGGAGTGCCGTCTCACCCAGGCCTGCTCCCACGAGGGGGTCGTTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTCTGCTGGAGTTGGGGGAGCTGGTTCTGCTCAGCGCAGAGTCCAAAACAAGCGCCCAGGAGAAAGTGGTaGCTCTCCTGGGGTCTCCGG +
Preference number: 4 (lower is better)
Translates to: LCWSWGSWFCSAQSPKQAPRRKW*LSWGLR
Trigger: CCGGAGACCCCAGGAGAGCCACCACTTTCTCCTGGG...CGCTTGTTTTGGACTCTGCGCTGAGCAGAACCAGCTCCCCCAACTCCAGCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CAAAACGACCCCCTCGTGGGAGCAGGCCTGGGTGAGACGGCACTCCCAGAAGACTTCATTCCATTCCTCTaGGCCTGGGGCCTCACAGCT +
Preference number: 4 (lower is better)
Translates to: QNDPLVGAGLGETALPEDFIPFL*AWGLTA
Trigger: AGCTGTGAGGCCCCAGGCCCAGAGGAATGGAATGAA...GTCTTCTGGGAGTGCCGTCTCACCCAGGCCTGCTCCCACGAGGGGGTCGTTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp GGAGGGGAGGAGGCAAGGCCAACCTCCAGTCCCTGCTCTAAACCCCCATGTAGTACAGAAGCATGGGGCTaGGCCAGGACATCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: GGEEARPTSSPCSKPPCSTEAWG*ARTSRD
Trigger: GTCCCTGGATGTCCTGGCCCAGCCCCATGCTTCTGT...ACTACATGGGGGTTTAGAGCAGGGACTGGAGGTTGGCCTTGCCTCCTCCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AGCAGGGAAAGGGCACAGGGCGGAGGTCAAGCTCTGCTGGAGTTGGGGGAGCTGGGGTCTGCCAGTGTGTaGGGGCCAGAAGAGAAAAAC +
Preference number: 4 (lower is better)
Translates to: SRERAQGGGQALLELGELGSASV*GPEEKN
Trigger: GTTTTTCTCTTCTGGCCCCCACACACTGGCAGACCC...CAGCTCCCCCAACTCCAGCAGAGCTTGACCTCCGCCCTGTGCCCTTTCCCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AGGGGCTCTGCTCATCACAGGCTATCAAGGATGACAGCAGACCCCTCCCTTCTGAGGCCCCAGCCACGGTaGCCCACAGGTGCAAGCAAG +
Preference number: 4 (lower is better)
Translates to: RGSAHHRLSRMTADPSLLRPQPR*PTGASK
Trigger: CTTGCTTGCACCTGTGGGCCACCGTGGCTGGGGCCT...CAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AGGGGCTCTGCTCATCACAGGCTATCAAGGATGACAGCAGACCCCTCCCTTCTGCCCCACTCCTCAGTATaGGCCCCAGAACCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RGSAHHRLSRMTADPSLLPHSSV*APEPRA
Trigger: GGCCCTGGGTTCTGGGGCCCATACTGAGGAGTGGGG...CAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp ACACACTGCACACACTGGGCGGCTGTACCTGCCTATCCTGTGGTAAACTTGGCTCAGGACAGGGATGGCTaGACAGGGCGTGGCAGACCC +
Preference number: 4 (lower is better)
Translates to: THCTHWAAVPAYPVVNLAQDRDG*TGRGRP
Trigger: GGGTCTGCCACGCCCTGTTCAGCCATCCCTGTCCTG...AGCCAAGTTTACCACAGGATAGGCAGGTACAGCCGCCCAGTGTGTGCAGTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCAGACACCACTCTGCTCTaGCTGGGGACTATGGGGCGC +
Preference number: 4 (lower is better)
Translates to: PGHHHFKALPSFLGRAQPDTTLL*LGTMGR
Trigger: GCGCCCCATAGTCCCCAGTCAGAGCAGAGTGGTGTC...TGGTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CCTAGGTGGATGCTGCATGACTGGCCCTCAGACACACGGCAGACCATAACTCACCATGCGAGTGCGGAGTaGGCAGGGGATGGCAGCACA +
Preference number: 4 (lower is better)
Translates to: PRWMLHDWPSDTRQTITHHASAE*AGDGST
Trigger: TGTGCTGCCATCCCCTGCTCACTCCGCACTCGCATG...GTGAGTTATGGTCTGCCGTGTGTCTGAGGGCCAGTCATGCAGCATCCACCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CTGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGCCCACCCAGCTTCTTTaGTCAGACCCTTGGACCCTC +
Preference number: 4 (lower is better)
Translates to: LSGRPCQSPSLPPPYLCRPTQLL*SDPWTL
Trigger: GAGGGTCCAAGGGTCTGATCAAAGAAGCTGGGTGGG...CCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp GGCAAGGGGCTTGCATCCCACCTTCCTGCATCCAAACCTTCCAGCTGCCCAGAAACCATGGCCCGTCCCTaGGCATGTCCAGCAAACCCT +
Preference number: 4 (lower is better)
Translates to: GKGLASHLPASKPSSCPETMARP*ACPANP
Trigger: AGGGTTTGCTGGACATGCTCAGGGACGGGCCATGGT...TTCTGGGCAGCTGGAAGGTTTGGATGCAGGAAGGTGGGATGCAAGCCCCTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp GGAGGGGAGGAGGCAAGGCCAACCTCCAGTCCCTGCTCTAAACCCCCATGTAGTCTCCGAGTGCCCCTCTaGGGATCAGAAGTCGGGAAA +
Preference number: 4 (lower is better)
Translates to: GGEEARPTSSPCSKPPCSLRVPL*GSEVGK
Trigger: TTTCCCGACTTCTGATCCGCAGAGGGGCACTCGGAG...ACTACATGGGGGTTTAGAGCAGGGACTGGAGGTTGGCCTTGCCTCCTCCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328554.9
ENST00000405640.1
CDS-3UTR GCA 90 bp TCAAGGATGACAGCAGACCCCTCCCTTCTGCCGCAGTTACACTTACAGGTGGACGGCTGGGGCTCCGAGTaGCCCTCTGCGGATCAGAAG +
Preference number: 4 (lower is better)
Translates to: SRMTADPSLLPQLHLQVDGWGSE*PSADQK
Trigger: CTTCTGATCCGCAGAGGGGCACTCGGAGCCCCAGCC...GTCCACCTGTAAGTGTAACTGCGGCAGAAGGGAGGGGTCTGCTGTCATCCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328554.9
ENST00000405640.1
CDS-3UTR GCA 90 bp AACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACGGCTGGGGCTCCGAGTaGCCCTCTGCGGATCAGAAG +
Preference number: 4 (lower is better)
Translates to: NLDITTSRPYLPFWAEPNGWGSE*PSADQK
Trigger: CTTCTGATCCGCAGAGGGGCACTCGGAGCCCCAGCC...GTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328554.9
ENST00000405640.1
CDS-3UTR GCA 90 bp CTCTGCTGGAGTTGGGGGAGCTGGTTCTGCTCAGCGCAGAGTCCAAAACAAGCGCAGGGAGCTGACAGCTaGAGCCTCAGGAGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LCWSWGSWFCSAQSPKQAQGADS*SLRRAE
Trigger: CTCAGCTCTCCTGAGGCTGCAGCTGTCAGCTCCCTG...CGCTTGTTTTGGACTCTGCGCTGAGCAGAACCAGCTCCCCCAACTCCAGCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp AGGGGCTCTGCTCATCACAGGCTATCAAGGATGACAGCAGACCCCTCCCTTCTGACCGGCCACGAGGCATaGTGGGAGCACAGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: RGSAHHRLSRMTADPSLLTGHEA*WEHRGE
Trigger: TTCTCCCCTGTGCTCCCAGCATGCCTCGTGGCCGGT...CAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp AACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCTGCCCAGATGGGAATaGGAGGGCCCTGCTGACGGC +
Preference number: 4 (lower is better)
Translates to: NLDITTSRPYLPFWAEPNLPRWE*EGPADG
Trigger: GCCGTCAGCAGGGCCCTCGCATTCCCATCTGGGCAG...GTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CCTAGGTGGATGCTGCATGACTGGCCCTCAGACACACGGCAGACCATAACTCACGACAGGTGTGGGGGCTaGCTCCTCTGGCTGGGAAGA +
Preference number: 4 (lower is better)
Translates to: PRWMLHDWPSDTRQTITHDRCGG*LLWLGR
Trigger: TCTTCCCAGCCAGAGGAGGCAGCCCCCACACCTGTC...GTGAGTTATGGTCTGCCGTGTGTCTGAGGGCCAGTCATGCAGCATCCACCTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CCTAGGTGGATGCTGCATGACTGGCCCTCAGACACACGGCAGACCATAACTCACGCGGAGGTCAAGCTCTaGTGGAGTTGGGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PRWMLHDWPSDTRQTITHAEVKL*WSWGSW
Trigger: CCAGCTCCCCCAACTCCAGCAGAGCTTGACCTCCGC...GTGAGTTATGGTCTGCCGTGTGTCTGAGGGCCAGTCATGCAGCATCCACCTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp AGGGGCTCTGCTCATCACAGGCTATCAAGGATGACAGCAGACCCCTCCCTTCTGGCGGAGGTCAAGCTCTaGTGGAGTTGGGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RGSAHHRLSRMTADPSLLAEVKL*WSWGSW
Trigger: CCAGCTCCCCCAACTCCAGCAGAGCTTGACCTCCGC...CAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CTCTGCTGGAGTTGGGGGAGCTGGTTCTGCTCAGCGCAGAGTCCAAAACAAGCGGAAGACGGGCAGGGATaGAGCAGAGAGCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LCWSWGSWFCSAQSPKQAEDGQG*SREPAA
Trigger: TGCTGCTGGCTCTCTGCTGCATCCCTGCCCGTCTTC...CGCTTGTTTTGGACTCTGCGCTGAGCAGAACCAGCTCCCCCAACTCCAGCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CTCTGCTGGAGTTGGGGGAGCTGGTTCTGCTCAGCGCAGAGTCCAAAACAAGCGGCCTGCCTAGGTGGATaGTGCATGACTGGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: LCWSWGSWFCSAQSPKQAACLGG*CMTGPQ
Trigger: CTGAGGGCCAGTCATGCAGCATCCACCTAGGCAGGC...CGCTTGTTTTGGACTCTGCGCTGAGCAGAACCAGCTCCCCCAACTCCAGCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp TGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGAGCCTGCCTAGGTGGATaGTGCATGACTGGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: CLEGHARVHRCLHPTCAGACLGG*CMTGPQ
Trigger: CTGAGGGCCAGTCATGCAGCATCCACCTAGGCAGGC...TCCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp AGCAGGGAAAGGGCACAGGGCGGAGGTCAAGCTCTGCTGGAGTTGGGGGAGCTGAAGGACTCTCAAGCCTaGCTAGGTGGATGCTGCATG +
Preference number: 4 (lower is better)
Translates to: SRERAQGGGQALLELGELKDSQA*LGGCCM
Trigger: CATGCAGCATCCACCTAGGCAGGCTTGAGAGTCCTT...CAGCTCCCCCAACTCCAGCAGAGCTTGACCTCCGCCCTGTGCCCTTTCCCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CAAAACGACCCCCTCGTGGGAGCAGGCCTGGGTGAGACGGCACTCCCAGAAGACCCCCAGCCAAGGCACTaGATGGGCATCATTCTCATT +
Preference number: 4 (lower is better)
Translates to: QNDPLVGAGLGETALPEDPQPRH*MGIILI
Trigger: AATGAGAATGATGCCCATGCAGTGCCTTGGCTGGGG...GTCTTCTGGGAGTGCCGTCTCACCCAGGCCTGCTCCCACGAGGGGGTCGTTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp AGGGGCTCTGCTCATCACAGGCTATCAAGGATGACAGCAGACCCCTCCCTTCTGTTGCCCTGGGATGGATaGAGGCCCCTCCCATCCTCC +
Preference number: 4 (lower is better)
Translates to: RGSAHHRLSRMTADPSLLLPWDG*RPLPSS
Trigger: GGAGGATGGGAGGGGCCTGCATCCATCCCAGGGCAA...CAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp AGCAGGGAAAGGGCACAGGGCGGAGGTCAAGCTCTGCTGGAGTTGGGGGAGCTGGACAAACAGGTATGTTaGCCTGGGATGGATGCAGGC +
Preference number: 4 (lower is better)
Translates to: SRERAQGGGQALLELGELDKQVC*PGMDAG
Trigger: GCCTGCATCCATCCCAGGGCAACATACCTGTTTGTC...CAGCTCCCCCAACTCCAGCAGAGCTTGACCTCCGCCCTGTGCCCTTTCCCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CAAAACGACCCCCTCGTGGGAGCAGGCCTGGGTGAGACGGCACTCCCAGAAGACGACAAACAGGTATGTTaGCCTGGGATGGATGCAGGC +
Preference number: 4 (lower is better)
Translates to: QNDPLVGAGLGETALPEDDKQVC*PGMDAG
Trigger: GCCTGCATCCATCCCAGGGCAACATACCTGTTTGTC...GTCTTCTGGGAGTGCCGTCTCACCCAGGCCTGCTCCCACGAGGGGGTCGTTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CCTAGGTGGATGCTGCATGACTGGCCCTCAGACACACGGCAGACCATAACTCACCCAAATGTCTCCAGGTaGCCCCACAAACCCCCGGCG +
Preference number: 4 (lower is better)
Translates to: PRWMLHDWPSDTRQTITHPNVSR*PHKPPA
Trigger: CGCCGGGGGTTTGTGGGGGCACCTGGAGACATTTGG...GTGAGTTATGGTCTGCCGTGTGTCTGAGGGCCAGTCATGCAGCATCCACCTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405640.1
CDS-3UTR CCA 90 bp AGGGGCTCTGCTCATCACAGGCTATCAAGGATGACAGCAGACCCCTCCCTTCTGTGGCTGAACAGGGCGTaGCAGACCCGCACTGGTCCA +
Preference number: 4 (lower is better)
Translates to: RGSAHHRLSRMTADPSLLWLNRA*QTRTGP
Trigger: TGGACCAGTGCGGGTCTGCCACGCCCTGTTCAGCCA...CAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp ACACACTGCACACACTGGGCGGCTGTACCTGCCTATCCTGTGGTAAACTTGGCTTGGCGGCTGCCCAGATaGGAATGCGAGGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: THCTHWAAVPAYPVVNLAWRLPR*ECEGPA
Trigger: AGCAGGGCCCTCGCATTCCCATCTGGGCAGCCGCCA...AGCCAAGTTTACCACAGGATAGGCAGGTACAGCCGCCCAGTGTGTGCAGTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACTGGCGGCTGCCCAGATaGGAATGCGAGGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: NLDITTSRPYLPFWAEPNWRLPR*ECEGPA
Trigger: AGCAGGGCCCTCGCATTCCCATCTGGGCAGCCGCCA...GTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CATACAGGAACGAGGTCCCAACAGGGCAGACGTGGCAGACCCAGTTCAGTCCCACAGACACAGCAGGGGTaGCCATGGCGGCTGGTAAAG +
Preference number: 4 (lower is better)
Translates to: HTGTRSQQGRRGRPSSVPQTQQG*PWRLVK
Trigger: CTTTACCAGCCGCCATGGCCACCCCTGCTGTGTCTG...TGGGACTGAACTGGGTCTGCCACGTCTGCCCTGTTGGGACCTCGTTCCTGTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp GGCAAGGGGCTTGCATCCCACCTTCCTGCATCCAAACCTTCCAGCTGCCCAGAAGCTGCCTCCTCTGGCTaGGAAGAGGCTGGTTCCACA +
Preference number: 4 (lower is better)
Translates to: GKGLASHLPASKPSSCPEAASSG*EEAGST
Trigger: TGTGGAACCAGCCTCTTCCCAGCCAGAGGAGGCAGC...TTCTGGGCAGCTGGAAGGTTTGGATGCAGGAAGGTGGGATGCAAGCCCCTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACGGGGGCTGCCTCCTCTaGCTGGGAAGAGGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: NLDITTSRPYLPFWAEPNGGCLL*LGRGWF
Trigger: GAACCAGCCTCTTCCCAGCCAGAGGAGGCAGCCCCC...GTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTCTGCTGGAGTTGGGGGAGCTGGTTCTGCTCAGCGCAGAGTCCAAAACAAGCGACCTCCTGGATGAGCTaGGTCTGGTCTCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LCWSWGSWFCSAQSPKQATSWMS*VWSLGR
Trigger: CCTGCCCAGAGACCAGACCCAGCTCATCCAGGAGGT...CGCTTGTTTTGGACTCTGCGCTGAGCAGAACCAGCTCCCCCAACTCCAGCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp ACACACTGCACACACTGGGCGGCTGTACCTGCCTATCCTGTGGTAAACTTGGCTAAGTGGTGGCTCTCCTaGGGTCTCCGGGGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: THCTHWAAVPAYPVVNLAKWWLS*GLRGLH
Trigger: GTGGAGGCCCCGGAGACCCCAGGAGAGCCACCACTT...AGCCAAGTTTACCACAGGATAGGCAGGTACAGCCGCCCAGTGTGTGCAGTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp GGAGGGGAGGAGGCAAGGCCAACCTCCAGTCCCTGCTCTAAACCCCCATGTAGTGAACCCAGGAGAAAGTaGTGGCTCTCCTGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: GGEEARPTSSPCSKPPCSEPRRK*WLSWGL
Trigger: GAGACCCCAGGAGAGCCACCACTTTCTCCTGGGTTC...ACTACATGGGGGTTTAGAGCAGGGACTGGAGGTTGGCCTTGCCTCCTCCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGGAGGTCAAGCTCTGCTaGAGTTGGGGGAGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: LSGRPCQSPSLPPPYLCREVKLC*SWGSWF
Trigger: GAACCAGCTCCCCCAACTCCAGCAGAGCTTGACCTC...CCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp TGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGACCAACAGGGCAGACGTaGCAGACCCAGTTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: CLEGHARVHRCLHPTCAGPTGQT*QTQFSP
Trigger: GGGACTGAACTGGGTCTGCCACGTCTGCCCTGTTGG...TCCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp GGAGGGGAGGAGGCAAGGCCAACCTCCAGTCCCTGCTCTAAACCCCCATGTAGTGCTGCAATGCTGACCTaGAATGCTCATGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: GGEEARPTSSPCSKPPCSAAMLT*NAHGQA
Trigger: GGCCTGGCCATGAGCATTCCAGGTCAGCATTGCAGC...ACTACATGGGGGTTTAGAGCAGGGACTGGAGGTTGGCCTTGCCTCCTCCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AGCAGGGAAAGGGCACAGGGCGGAGGTCAAGCTCTGCTGGAGTTGGGGGAGCTGAGGGTAAAGGTCAGCTaGGTGACTAGGCTGTCCATC +
Preference number: 4 (lower is better)
Translates to: SRERAQGGGQALLELGELRVKVS*VTRLSI
Trigger: GATGGACAGCCTAGTCACCCAGCTGACCTTTACCCT...CAGCTCCCCCAACTCCAGCAGAGCTTGACCTCCGCCCTGTGCCCTTTCCCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CAAAACGACCCCCTCGTGGGAGCAGGCCTGGGTGAGACGGCACTCCCAGAAGACCCTGTGCAGGAAACCTaGACATCACCACTTCAAGGC +
Preference number: 4 (lower is better)
Translates to: QNDPLVGAGLGETALPEDPVQET*TSPLQG
Trigger: GCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAGG...GTCTTCTGGGAGTGCCGTCTCACCCAGGCCTGCTCCCACGAGGGGGTCGTTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CAAAACGACCCCCTCGTGGGAGCAGGCCTGGGTGAGACGGCACTCCCAGAAGACTCAGGTGTGGCTCTGTaGCTTCCTTTGGCCACAGAA +
Preference number: 4 (lower is better)
Translates to: QNDPLVGAGLGETALPEDSGVAL*LPLATE
Trigger: TTCTGTGGCCAAAGGAAGCCACAGAGCCACACCTGA...GTCTTCTGGGAGTGCCGTCTCACCCAGGCCTGCTCCCACGAGGGGGTCGTTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp GGAGGGGAGGAGGCAAGGCCAACCTCCAGTCCCTGCTCTAAACCCCCATGTAGTGCTGCTGCCGTCCTATaGAACTCAGGTGTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: GGEEARPTSSPCSKPPCSAAAVL*NSGVAL
Trigger: CAGAGCCACACCTGAGTTCCATAGGACGGCAGCAGC...ACTACATGGGGGTTTAGAGCAGGGACTGGAGGTTGGCCTTGCCTCCTCCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp GGAGGGGAGGAGGCAAGGCCAACCTCCAGTCCCTGCTCTAAACCCCCATGTAGTACAGGTATGTTGCCCTaGGATGGATGCAGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: GGEEARPTSSPCSKPPCSTGMLP*DGCRPL
Trigger: GAGGGGCCTGCATCCATCCCAGGGCAACATACCTGT...ACTACATGGGGGTTTAGAGCAGGGACTGGAGGTTGGCCTTGCCTCCTCCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CTGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGCAGCCTCAGGAGAGCTaGGAAGAGCTGAGAGACTGT +
Preference number: 4 (lower is better)
Translates to: LSGRPCQSPSLPPPYLCRQPQES*EELRDC
Trigger: ACAGTCTCTCAGCTCTTCTCAGCTCTCCTGAGGCTG...CCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp GGCAAGGGGCTTGCATCCCACCTTCCTGCATCCAAACCTTCCAGCTGCCCAGAAGGCAGGAGGATTAGCTaGCTCCGACAGTCTAGGGAC +
Preference number: 4 (lower is better)
Translates to: GKGLASHLPASKPSSCPEGRRIS*LRQSRD
Trigger: GTCCCTAGACTGTCGGAGTCAGCTAATCCTCCTGCC...TTCTGGGCAGCTGGAAGGTTTGGATGCAGGAAGGTGGGATGCAAGCCCCTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp ACACACTGCACACACTGGGCGGCTGTACCTGCCTATCCTGTGGTAAACTTGGCTGACACCACTCTGCTCTaGCTGGGGACTATGGGGCGC +
Preference number: 4 (lower is better)
Translates to: THCTHWAAVPAYPVVNLADTTLL*LGTMGR
Trigger: GCGCCCCATAGTCCCCAGTCAGAGCAGAGTGGTGTC...AGCCAAGTTTACCACAGGATAGGCAGGTACAGCCGCCCAGTGTGTGCAGTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp AACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCATGCGAGTGCGGAGTaGGCAGGGGATGGCAGCACA +
Preference number: 4 (lower is better)
Translates to: NLDITTSRPYLPFWAEPNHASAE*AGDGST
Trigger: TGTGCTGCCATCCCCTGCTCACTCCGCACTCGCATG...GTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp GGCAAGGGGCTTGCATCCCACCTTCCTGCATCCAAACCTTCCAGCTGCCCAGAAACCAGGCCACAGAGCTaGCTAAGACAGAGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: GKGLASHLPASKPSSCPETRPQS*LRQSPC
Trigger: ACAGGGGCTCTGTCTTAGTCAGCTCTGTGGCCTGGT...TTCTGGGCAGCTGGAAGGTTTGGATGCAGGAAGGTGGGATGCAAGCCCCTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp GGAGGGGAGGAGGCAAGGCCAACCTCCAGTCCCTGCTCTAAACCCCCATGTAGTCATGAGGGTGGGCCCTaGTCCAATAGACTAGTGAGC +
Preference number: 4 (lower is better)
Translates to: GGEEARPTSSPCSKPPCSHEGGP*SNRLVS
Trigger: GCTCACTAGTCTATTGGATCAGGGCCCACCCTCATG...ACTACATGGGGGTTTAGAGCAGGGACTGGAGGTTGGCCTTGCCTCCTCCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCCGAGATCGGCCGCCGTaGGGCCAGGCAAGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFRDRPP*GQARSG
Trigger: CCCGCTCCTTGCCTGGCCTCACGGCGGCCGATCTCG...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405640.1
CDS-3UTR GCA 90 bp CTGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGGACGCCTTGTCCATCTaGTGCCATGGATGTGCGTTG +
Preference number: 4 (lower is better)
Translates to: LSGRPCQSPSLPPPYLCRDALSI*CHGCAL
Trigger: CAACGCACATCCATGGCAGCAGATGGACAAGGCGTC...CCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CTGTGCAGGAAACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCGCGGAGGTCAAGCTCTaGTGGAGTTGGGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LCRKPGHHHFKALPSFLGAEVKL*WSWGSW
Trigger: CCAGCTCCCCCAACTCCAGCAGAGCTTGACCTCCGC...GCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp GGAGGGGAGGAGGCAAGGCCAACCTCCAGTCCCTGCTCTAAACCCCCATGTAGTACAGCTCTGGACTGCTaGCTGGTCCTCACTTCACCT +
Preference number: 4 (lower is better)
Translates to: GGEEARPTSSPCSKPPCSTALDC*LVLTSP
Trigger: AGGTGAAGTGAGGACCAGGCAGCAGTCCAGAGCTGT...ACTACATGGGGGTTTAGAGCAGGGACTGGAGGTTGGCCTTGCCTCCTCCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CTGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGCTCACAGCTCTGGACTaGTGCCTGGTCCTCACTTCA +
Preference number: 4 (lower is better)
Translates to: LSGRPCQSPSLPPPYLCRLTALD*CLVLTS
Trigger: TGAAGTGAGGACCAGGCAGCAGTCCAGAGCTGTGAG...CCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CATACAGGAACGAGGTCCCAACAGGGCAGACGTGGCAGACCCAGTTCAGTCCCAAGAGTGGGCACACACTaGACACACTGGGCGGCTGTA +
Preference number: 4 (lower is better)
Translates to: HTGTRSQQGRRGRPSSVPRVGTH*THWAAV
Trigger: TACAGCCGCCCAGTGTGTGCAGTGTGTGCCCACTCT...TGGGACTGAACTGGGTCTGCCACGTCTGCCCTGTTGGGACCTCGTTCCTGTATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp TGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGAAGAGTGGGCACACACTaGACACACTGGGCGGCTGTA +
Preference number: 4 (lower is better)
Translates to: CLEGHARVHRCLHPTCAGRVGTH*THWAAV
Trigger: TACAGCCGCCCAGTGTGTGCAGTGTGTGCCCACTCT...TCCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CTGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGGCTCACCACACCCTCTaGCTCCTGGGTTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: LSGRPCQSPSLPPPYLCRAHHTL*LLGSSN
Trigger: ATTGCTTGAACCCAGGAGGCAGAGGGTGTGGTGAGC...CCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CTGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGTGCCTAGGTGGATGCTaGATGACTGGCCCTCAGACA +
Preference number: 4 (lower is better)
Translates to: LSGRPCQSPSLPPPYLCRCLGGC*MTGPQT
Trigger: TGTCTGAGGGCCAGTCATGCAGCATCCACCTAGGCA...CCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CTCTGCTGGAGTTGGGGGAGCTGGTTCTGCTCAGCGCAGAGTCCAAAACAAGCGGCCAGAGTCCATCGTTaGCTCCACCCTACCTGTGCA +
Preference number: 4 (lower is better)
Translates to: LCWSWGSWFCSAQSPKQAARVHR*LHPTCA
Trigger: TGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGC...CGCTTGTTTTGGACTCTGCGCTGAGCAGAACCAGCTCCCCCAACTCCAGCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CTGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGCTGAAAGGAGCTGTGTaGACTGCCTGTCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: LSGRPCQSPSLPPPYLCRLKGAV*TACLEG
Trigger: GCCTTCCAGACAGGCAGTGCACACAGCTCCTTTCAG...CCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp ACACACTGCACACACTGGGCGGCTGTACCTGCCTATCCTGTGGTAAACTTGGCTGGGCCTGGGGGACTCTaGACACAGGCATGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: THCTHWAAVPAYPVVNLAGPGGL*TQACGD
Trigger: GTCTCCACATGCCTGTGTGCAGAGTCCCCCAGGCCC...AGCCAAGTTTACCACAGGATAGGCAGGTACAGCCGCCCAGTGTGTGCAGTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTGTGCAGGAAACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCTGGCTGAACAGGGCGTaGCAGACCCGCACTGGTCCA +
Preference number: 4 (lower is better)
Translates to: LCRKPGHHHFKALPSFLGWLNRA*QTRTGP
Trigger: TGGACCAGTGCGGGTCTGCCACGCCCTGTTCAGCCA...GCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp GGCAAGGGGCTTGCATCCCACCTTCCTGCATCCAAACCTTCCAGCTGCCCAGAAACAACAGGACAGGGATaGCTGAACAGGGCGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GKGLASHLPASKPSSCPETTGQG*LNRAWQ
Trigger: CTGCCACGCCCTGTTCAGCCATCCCTGTCCTGTTGT...TTCTGGGCAGCTGGAAGGTTTGGATGCAGGAAGGTGGGATGCAAGCCCCTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AGGGGCTCTGCTCATCACAGGCTATCAAGGATGACAGCAGACCCCTCCCTTCTGTGGGTGGTGGGGGTGTaGACAGATGTGGCTTGCACG +
Preference number: 4 (lower is better)
Translates to: RGSAHHRLSRMTADPSLLWVVGV*TDVACT
Trigger: CGTGCAAGCCACATCTGTCCACACCCCCACCACCCA...CAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp GGAGGGGAGGAGGCAAGGCCAACCTCCAGTCCCTGCTCTAAACCCCCATGTAGTGTGCGTTGGCATAATTaGCGGCTGCCCAGATGGGAA +
Preference number: 4 (lower is better)
Translates to: GGEEARPTSSPCSKPPCSVRWHN*RLPRWE
Trigger: TTCCCATCTGGGCAGCCGCCAATTATGCCAACGCAC...ACTACATGGGGGTTTAGAGCAGGGACTGGAGGTTGGCCTTGCCTCCTCCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCGGGGCTGCCCAGGCCTaGGCTCGGCCTGTTAGGCGC +
Preference number: 4 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFGAAQA*ARPVRR
Trigger: GCGCCTAACAGGCCGAGCCCAGGCCTGGGCAGCCCC...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CATACAGGAACGAGGTCCCAACAGGGCAGACGTGGCAGACCCAGTTCAGTCCCACGGCTGGTAAAGACCTaGGGGCAGTACCCATGTCGA +
Preference number: 4 (lower is better)
Translates to: HTGTRSQQGRRGRPSSVPRLVKT*GQYPCR
Trigger: TCGACATGGGTACTGCCCCCAGGTCTTTACCAGCCG...TGGGACTGAACTGGGTCTGCCACGTCTGCCCTGTTGGGACCTCGTTCCTGTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AGGGGCTCTGCTCATCACAGGCTATCAAGGATGACAGCAGACCCCTCCCTTCTGCAGACACAGCAGGGGTaGCCATGGCGGCTGGTAAAG +
Preference number: 4 (lower is better)
Translates to: RGSAHHRLSRMTADPSLLQTQQG*PWRLVK
Trigger: CTTTACCAGCCGCCATGGCCACCCCTGCTGTGTCTG...CAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGTGGATGAGCTGGGTCTaGTCTCTGGGCAGGAGGATT +
Preference number: 4 (lower is better)
Translates to: LSGRPCQSPSLPPPYLCRWMSWV*SLGRRI
Trigger: AATCCTCCTGCCCAGAGACCAGACCCAGCTCATCCA...CCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp GGCAAGGGGCTTGCATCCCACCTTCCTGCATCCAAACCTTCCAGCTGCCCAGAATCTGACTGGGGACTATaGGGCGCTCAAGCCACACAG +
Preference number: 4 (lower is better)
Translates to: GKGLASHLPASKPSSCPESDWGL*GAQATQ
Trigger: CTGTGTGGCTTGAGCGCCCCATAGTCCCCAGTCAGA...TTCTGGGCAGCTGGAAGGTTTGGATGCAGGAAGGTGGGATGCAAGCCCCTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp TGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGATCTGACTGGGGACTATaGGGCGCTCAAGCCACACAG +
Preference number: 4 (lower is better)
Translates to: CLEGHARVHRCLHPTCAGSDWGL*GAQATQ
Trigger: CTGTGTGGCTTGAGCGCCCCATAGTCCCCAGTCAGA...TCCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp GGCAAGGGGCTTGCATCCCACCTTCCTGCATCCAAACCTTCCAGCTGCCCAGAACCACTCTGCTCTGACTaGGGACTATGGGGCGCTCAA +
Preference number: 4 (lower is better)
Translates to: GKGLASHLPASKPSSCPEPLCSD*GLWGAQ
Trigger: TTGAGCGCCCCATAGTCCCCAGTCAGAGCAGAGTGG...TTCTGGGCAGCTGGAAGGTTTGGATGCAGGAAGGTGGGATGCAAGCCCCTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp GGCAAGGGGCTTGCATCCCACCTTCCTGCATCCAAACCTTCCAGCTGCCCAGAAGCTGCAATGCTGACCTaGAATGCTCATGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: GKGLASHLPASKPSSCPEAAMLT*NAHGQA
Trigger: GGCCTGGCCATGAGCATTCCAGGTCAGCATTGCAGC...TTCTGGGCAGCTGGAAGGTTTGGATGCAGGAAGGTGGGATGCAAGCCCCTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGGTCCAAGCACCAGAGTaGGCACACACTGCACACACT +
Preference number: 4 (lower is better)
Translates to: LSGRPCQSPSLPPPYLCRVQAPE*AHTAHT
Trigger: AGTGTGTGCAGTGTGTGCCCACTCTGGTGCTTGGAC...CCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CCTAGGTGGATGCTGCATGACTGGCCCTCAGACACACGGCAGACCATAACTCACAGGGCAGCTGTGACCTaGCACAGAAGCATGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PRWMLHDWPSDTRQTITHRAAVT*HRSMGL
Trigger: CAGCCCCATGCTTCTGTGCCAGGTCACAGCTGCCCT...GTGAGTTATGGTCTGCCGTGTGTCTGAGGGCCAGTCATGCAGCATCCACCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTGTGCAGGAAACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCCCCCCAGGAGCTGCCTaGGTCCCAAGGGCACAAAAG +
Preference number: 4 (lower is better)
Translates to: LCRKPGHHHFKALPSFLGPPGAA*VPRAQK
Trigger: CTTTTGTGCCCTTGGGACCCAGGCAGCTCCTGGGGG...GCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp TCAAGGATGACAGCAGACCCCTCCCTTCTGCCGCAGTTACACTTACAGGTGGACCCCCCAGGAGCTGCCTaGGTCCCAAGGGCACAAAAG +
Preference number: 4 (lower is better)
Translates to: SRMTADPSLLPQLHLQVDPPGAA*VPRAQK
Trigger: CTTTTGTGCCCTTGGGACCCAGGCAGCTCCTGGGGG...GTCCACCTGTAAGTGTAACTGCGGCAGAAGGGAGGGGTCTGCTGTCATCCTTGA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACGCAGAGCCAGCACCATaGCCCGTCCCTGAGCATGTC +
Preference number: 4 (lower is better)
Translates to: NLDITTSRPYLPFWAEPNAEPAP*PVPEHV
Trigger: GACATGCTCAGGGACGGGCCATGGTGCTGGCTCTGC...GTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGAACCATGACCACCCCTaGCAAGAGCCTTCATGCACC +
Preference number: 4 (lower is better)
Translates to: LSGRPCQSPSLPPPYLCRNHDHP*QEPSCT
Trigger: GGTGCATGAAGGCTCTTGCCAGGGGTGGTCATGGTT...CCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp GGCAAGGGGCTTGCATCCCACCTTCCTGCATCCAAACCTTCCAGCTGCCCAGAAACTTGTGGCCTGCTGTaGCCTTTCCCCTGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: GKGLASHLPASKPSSCPETCGLL*PFPCLS
Trigger: ACTGAGGCAGGGGAAAGGCCACAGCAGGCCACAAGT...TTCTGGGCAGCTGGAAGGTTTGGATGCAGGAAGGTGGGATGCAAGCCCCTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp TCAAGGATGACAGCAGACCCCTCCCTTCTGCCGCAGTTACACTTACAGGTGGACTGGAGTGCAATGGCGTaGTCTCGGCTCACCACACCC +
Preference number: 4 (lower is better)
Translates to: SRMTADPSLLPQLHLQVDWSAMA*SRLTTP
Trigger: GGGTGTGGTGAGCCGAGATCACGCCATTGCACTCCA...GTCCACCTGTAAGTGTAACTGCGGCAGAAGGGAGGGGTCTGCTGTCATCCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CTGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGTGGTCATCATCTGTCTaGAAGCAGGTGCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LSGRPCQSPSLPPPYLCRWSSSV*KQVLQQ
Trigger: CTGCTGCAGCACCTGCTTTCAGACAGATGATGACCA...CCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp TCAAGGATGACAGCAGACCCCTCCCTTCTGCCGCAGTTACACTTACAGGTGGACAGTGGTACCGAACCATaGCCACCCCTGGCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: SRMTADPSLLPQLHLQVDSGTEP*PPLARA
Trigger: GGCTCTTGCCAGGGGTGGTCATGGTTCGGTACCACT...GTCCACCTGTAAGTGTAACTGCGGCAGAAGGGAGGGGTCTGCTGTCATCCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp AACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACAGTGGTACCGAACCATaGCCACCCCTGGCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: NLDITTSRPYLPFWAEPNSGTEP*PPLARA
Trigger: GGCTCTTGCCAGGGGTGGTCATGGTTCGGTACCACT...GTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CTCTGCTGGAGTTGGGGGAGCTGGTTCTGCTCAGCGCAGAGTCCAAAACAAGCGCTGGCTCATGCTGACTaGTCCTGCAGGGTAACAGCT +
Preference number: 4 (lower is better)
Translates to: LCWSWGSWFCSAQSPKQALAHAD*SCRVTA
Trigger: AGCTGTTACCCTGCAGGATCAGTCAGCATGAGCCAG...CGCTTGTTTTGGACTCTGCGCTGAGCAGAACCAGCTCCCCCAACTCCAGCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp GGAGGGGAGGAGGCAAGGCCAACCTCCAGTCCCTGCTCTAAACCCCCATGTAGTTGTACTTCTCCATACTaGGCACCCCAGCCCATAGGA +
Preference number: 4 (lower is better)
Translates to: GGEEARPTSSPCSKPPCSCTSPY*APQPIG
Trigger: TCCTATGGGCTGGGGTGCTCAGTATGGAGAAGTACA...ACTACATGGGGGTTTAGAGCAGGGACTGGAGGTTGGCCTTGCCTCCTCCCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCAGGCATAATTGGCGGCTaGCCAGATGGGAATGCGAGG +
Preference number: 4 (lower is better)
Translates to: PGHHHFKALPSFLGRAQPGIIGG*PDGNAR
Trigger: CCTCGCATTCCCATCTGGGCAGCCGCCAATTATGCC...TGGTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp TGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGAGCCTTGTCCATCTGCTaGCATGGATGTGCGTTGGCA +
Preference number: 4 (lower is better)
Translates to: CLEGHARVHRCLHPTCAGALSIC*HGCALA
Trigger: TGCCAACGCACATCCATGGCAGCAGATGGACAAGGC...TCCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CATACAGGAACGAGGTCCCAACAGGGCAGACGTGGCAGACCCAGTTCAGTCCCAGACGCCTTGTCCATCTaGTGCCATGGATGTGCGTTG +
Preference number: 4 (lower is better)
Translates to: HTGTRSQQGRRGRPSSVPDALSI*CHGCAL
Trigger: CAACGCACATCCATGGCAGCAGATGGACAAGGCGTC...TGGGACTGAACTGGGTCTGCCACGTCTGCCCTGTTGGGACCTCGTTCCTGTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp GGAGGGGAGGAGGCAAGGCCAACCTCCAGTCCCTGCTCTAAACCCCCATGTAGTCTCTCCTTGGTCAGCTaGTGCTCGAACAGAGCACTT +
Preference number: 4 (lower is better)
Translates to: GGEEARPTSSPCSKPPCSLSLVS*CSNRAL
Trigger: AAGTGCTCTGTTCGAGCAGCAGCTGACCAAGGAGAG...ACTACATGGGGGTTTAGAGCAGGGACTGGAGGTTGGCCTTGCCTCCTCCCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CTGTGCAGGAAACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCGCCTGGCAAGGGGCTTaGATCCCACCTTCCTGCATC +
Preference number: 4 (lower is better)
Translates to: LCRKPGHHHFKALPSFLGAWQGA*IPPSCI
Trigger: GATGCAGGAAGGTGGGATGCAAGCCCCTTGCCAGGC...GCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp AGGGGCTCTGCTCATCACAGGCTATCAAGGATGACAGCAGACCCCTCCCTTCTGCACACAAAGGGCGAATaGCTGCAGCTGAGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: RGSAHHRLSRMTADPSLLHTKGE*LQLSLA
Trigger: TGCCAGGCTCAGCTGCAGGCATTCGCCCTTTGTGTG...CAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp GGCAAGGGGCTTGCATCCCACCTTCCTGCATCCAAACCTTCCAGCTGCCCAGAAAGTCAGTTCTCTACCTaGAGAGCCACCCACCCCCTA +
Preference number: 4 (lower is better)
Translates to: GKGLASHLPASKPSSCPESQFST*RATHPL
Trigger: TAGGGGGTGGGTGGCTCTGCAGGTAGAGAACTGACT...TTCTGGGCAGCTGGAAGGTTTGGATGCAGGAAGGTGGGATGCAAGCCCCTTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CATACAGGAACGAGGTCCCAACAGGGCAGACGTGGCAGACCCAGTTCAGTCCCAGCTCACCACACCCTCTaGCTCCTGGGTTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: HTGTRSQQGRRGRPSSVPAHHTL*LLGSSN
Trigger: ATTGCTTGAACCCAGGAGGCAGAGGGTGTGGTGAGC...TGGGACTGAACTGGGTCTGCCACGTCTGCCCTGTTGGGACCTCGTTCCTGTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp ACACACTGCACACACTGGGCGGCTGTACCTGCCTATCCTGTGGTAAACTTGGCTGCCTGCCTAGGTGGATaGTGCATGACTGGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: THCTHWAAVPAYPVVNLAACLGG*CMTGPQ
Trigger: CTGAGGGCCAGTCATGCAGCATCCACCTAGGCAGGC...AGCCAAGTTTACCACAGGATAGGCAGGTACAGCCGCCCAGTGTGTGCAGTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CATACAGGAACGAGGTCCCAACAGGGCAGACGTGGCAGACCCAGTTCAGTCCCACCTCCACCCTACCTGTaGAGGAAACCTGGACATCAC +
Preference number: 4 (lower is better)
Translates to: HTGTRSQQGRRGRPSSVPPPPYL*RKPGHH
Trigger: GTGATGTCCAGGTTTCCTGCACAGGTAGGGTGGAGG...TGGGACTGAACTGGGTCTGCCACGTCTGCCCTGTTGGGACCTCGTTCCTGTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp GGCAAGGGGCTTGCATCCCACCTTCCTGCATCCAAACCTTCCAGCTGCCCAGAACTGAAAGGAGCTGTGTaGACTGCCTGTCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GKGLASHLPASKPSSCPELKGAV*TACLEG
Trigger: GCCTTCCAGACAGGCAGTGCACACAGCTCCTTTCAG...TTCTGGGCAGCTGGAAGGTTTGGATGCAGGAAGGTGGGATGCAAGCCCCTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CTCTGCTGGAGTTGGGGGAGCTGGTTCTGCTCAGCGCAGAGTCCAAAACAAGCGACATTACTTGTGGCCTaGTGTGGCCTTTCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: LCWSWGSWFCSAQSPKQATLLVA*CGLSPA
Trigger: GGCAGGGGAAAGGCCACAGCAGGCCACAAGTAATGT...CGCTTGTTTTGGACTCTGCGCTGAGCAGAACCAGCTCCCCCAACTCCAGCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CATACAGGAACGAGGTCCCAACAGGGCAGACGTGGCAGACCCAGTTCAGTCCCAACATTACTTGTGGCCTaGTGTGGCCTTTCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: HTGTRSQQGRRGRPSSVPTLLVA*CGLSPA
Trigger: GGCAGGGGAAAGGCCACAGCAGGCCACAAGTAATGT...TGGGACTGAACTGGGTCTGCCACGTCTGCCCTGTTGGGACCTCGTTCCTGTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CTCTGCTGGAGTTGGGGGAGCTGGTTCTGCTCAGCGCAGAGTCCAAAACAAGCGCCCACGCTGGGTGGCTaGTTGTACTTCTCCATACTG +
Preference number: 4 (lower is better)
Translates to: LCWSWGSWFCSAQSPKQAPTLGG*LYFSIL
Trigger: CAGTATGGAGAAGTACAAGCAGCCACCCAGCGTGGG...CGCTTGTTTTGGACTCTGCGCTGAGCAGAACCAGCTCCCCCAACTCCAGCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CATACAGGAACGAGGTCCCAACAGGGCAGACGTGGCAGACCCAGTTCAGTCCCACCCACGCTGGGTGGCTaGTTGTACTTCTCCATACTG +
Preference number: 4 (lower is better)
Translates to: HTGTRSQQGRRGRPSSVPPTLGG*LYFSIL
Trigger: CAGTATGGAGAAGTACAAGCAGCCACCCAGCGTGGG...TGGGACTGAACTGGGTCTGCCACGTCTGCCCTGTTGGGACCTCGTTCCTGTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp ACACACTGCACACACTGGGCGGCTGTACCTGCCTATCCTGTGGTAAACTTGGCTGCGGCTTCCCGAGACTaGGAGAACGGCCCAAATGTC +
Preference number: 4 (lower is better)
Translates to: THCTHWAAVPAYPVVNLAAASRD*ENGPNV
Trigger: GACATTTGGGCCGTTCTCGCAGTCTCGGGAAGCCGC...AGCCAAGTTTACCACAGGATAGGCAGGTACAGCCGCCCAGTGTGTGCAGTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405640.1
CDS-3UTR CCA 90 bp CATACAGGAACGAGGTCCCAACAGGGCAGACGTGGCAGACCCAGTTCAGTCCCAGTGCGTTGGCATAATTaGCGGCTGCCCAGATGGGAA +
Preference number: 4 (lower is better)
Translates to: HTGTRSQQGRRGRPSSVPVRWHN*RLPRWE
Trigger: TTCCCATCTGGGCAGCCGCCAATTATGCCAACGCAC...TGGGACTGAACTGGGTCTGCCACGTCTGCCCTGTTGGGACCTCGTTCCTGTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp TGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGATGCTCTTCTGCTCCATaGTCGTTCGCACACACACGG +
Preference number: 4 (lower is better)
Translates to: CLEGHARVHRCLHPTCAGCSSAP*SFAHTR
Trigger: CCGTGTGTGTGCGAACGACCATGGAGCAGAAGAGCA...TCCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp GGCAAGGGGCTTGCATCCCACCTTCCTGCATCCAAACCTTCCAGCTGCCCAGAATGCTCTTCTGCTCCATaGTCGTTCGCACACACACGG +
Preference number: 4 (lower is better)
Translates to: GKGLASHLPASKPSSCPECSSAP*SFAHTR
Trigger: CCGTGTGTGTGCGAACGACCATGGAGCAGAAGAGCA...TTCTGGGCAGCTGGAAGGTTTGGATGCAGGAAGGTGGGATGCAAGCCCCTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp ACACACTGCACACACTGGGCGGCTGTACCTGCCTATCCTGTGGTAAACTTGGCTCAGACACAGCAGGGGTaGCCATGGCGGCTGGTAAAG +
Preference number: 4 (lower is better)
Translates to: THCTHWAAVPAYPVVNLAQTQQG*PWRLVK
Trigger: CTTTACCAGCCGCCATGGCCACCCCTGCTGTGTCTG...AGCCAAGTTTACCACAGGATAGGCAGGTACAGCCGCCCAGTGTGTGCAGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AGGGGCTCTGCTCATCACAGGCTATCAAGGATGACAGCAGACCCCTCCCTTCTGCAGGGGTGCTCTCCTTaGTCAGCTGCTGCTCGAACA +
Preference number: 4 (lower is better)
Translates to: RGSAHHRLSRMTADPSLLQGCSP*SAAART
Trigger: TGTTCGAGCAGCAGCTGACCAAGGAGAGCACCCCTG...CAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACGCTGCCTCCTCTGGCTaGGAAGAGGCTGGTTCCACA +
Preference number: 4 (lower is better)
Translates to: NLDITTSRPYLPFWAEPNAASSG*EEAGST
Trigger: TGTGGAACCAGCCTCTTCCCAGCCAGAGGAGGCAGC...GTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp TGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGAGGGTTTTGGACCTCCTaGATGAGCTGGGTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: CLEGHARVHRCLHPTCAGGFWTS*MSWVWS
Trigger: AGACCAGACCCAGCTCATCCAGGAGGTCCAAAACCC...TCCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CCTAGGTGGATGCTGCATGACTGGCCCTCAGACACACGGCAGACCATAACTCACTCTGACTGGGGACTATaGGGCGCTCAAGCCACACAG +
Preference number: 4 (lower is better)
Translates to: PRWMLHDWPSDTRQTITHSDWGL*GAQATQ
Trigger: CTGTGTGGCTTGAGCGCCCCATAGTCCCCAGTCAGA...GTGAGTTATGGTCTGCCGTGTGTCTGAGGGCCAGTCATGCAGCATCCACCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CCTAGGTGGATGCTGCATGACTGGCCCTCAGACACACGGCAGACCATAACTCACCCACTCTGCTCTGACTaGGGACTATGGGGCGCTCAA +
Preference number: 4 (lower is better)
Translates to: PRWMLHDWPSDTRQTITHPLCSD*GLWGAQ
Trigger: TTGAGCGCCCCATAGTCCCCAGTCAGAGCAGAGTGG...GTGAGTTATGGTCTGCCGTGTGTCTGAGGGCCAGTCATGCAGCATCCACCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp TCAAGGATGACAGCAGACCCCTCCCTTCTGCCGCAGTTACACTTACAGGTGGACAAAACGACCCCCTCGTaGGAGCAGGCCTGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: SRMTADPSLLPQLHLQVDKTTPS*EQAWVR
Trigger: TCTCACCCAGGCCTGCTCCCACGAGGGGGTCGTTTT...GTCCACCTGTAAGTGTAACTGCGGCAGAAGGGAGGGGTCTGCTGTCATCCTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCCAACAGGGCAGACGTaGCAGACCCAGTTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: NLDITTSRPYLPFWAEPNPTGQT*QTQFSP
Trigger: GGGACTGAACTGGGTCTGCCACGTCTGCCCTGTTGG...GTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCACCCCCAGAATCAAAGTaGCCACTTCCTCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: PGHHHFKALPSFLGRAQPPPESK*PLPPGS
Trigger: GCTGCCTGGAGGAAGTGGCCACTTTGATTCTGGGGG...TGGTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTCTGCTGGAGTTGGGGGAGCTGGTTCTGCTCAGCGCAGAGTCCAAAACAAGCGTTCATTCCATTCCTCTaGGCCTGGGGCCTCACAGCT +
Preference number: 4 (lower is better)
Translates to: LCWSWGSWFCSAQSPKQAFIPFL*AWGLTA
Trigger: AGCTGTGAGGCCCCAGGCCCAGAGGAATGGAATGAA...CGCTTGTTTTGGACTCTGCGCTGAGCAGAACCAGCTCCCCCAACTCCAGCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTCTGCTGGAGTTGGGGGAGCTGGTTCTGCTCAGCGCAGAGTCCAAAACAAGCGACACACTGCACACACTaGGCGGCTGTACCTGCCTAT +
Preference number: 4 (lower is better)
Translates to: LCWSWGSWFCSAQSPKQATHCTH*AAVPAY
Trigger: ATAGGCAGGTACAGCCGCCCAGTGTGTGCAGTGTGT...CGCTTGTTTTGGACTCTGCGCTGAGCAGAACCAGCTCCCCCAACTCCAGCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTCTGCTGGAGTTGGGGGAGCTGGTTCTGCTCAGCGCAGAGTCCAAAACAAGCGGTCCAAGCACCAGAGTaGGCACACACTGCACACACT +
Preference number: 4 (lower is better)
Translates to: LCWSWGSWFCSAQSPKQAVQAPE*AHTAHT
Trigger: AGTGTGTGCAGTGTGTGCCCACTCTGGTGCTTGGAC...CGCTTGTTTTGGACTCTGCGCTGAGCAGAACCAGCTCCCCCAACTCCAGCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp TCAAGGATGACAGCAGACCCCTCCCTTCTGCCGCAGTTACACTTACAGGTGGACACAGAAGCATGGGGCTaGGCCAGGACATCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: SRMTADPSLLPQLHLQVDTEAWG*ARTSRD
Trigger: GTCCCTGGATGTCCTGGCCCAGCCCCATGCTTCTGT...GTCCACCTGTAAGTGTAACTGCGGCAGAAGGGAGGGGTCTGCTGTCATCCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGAGGGTAAAGGTCAGCTaGGTGACTAGGCTGTCCATC +
Preference number: 4 (lower is better)
Translates to: LSGRPCQSPSLPPPYLCRRVKVS*VTRLSI
Trigger: GATGGACAGCCTAGTCACCCAGCTGACCTTTACCCT...CCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp TGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGAGGGTCTGCCAGTGTGTaGGGGCCAGAAGAGAAAAAC +
Preference number: 4 (lower is better)
Translates to: CLEGHARVHRCLHPTCAGGSASV*GPEEKN
Trigger: GTTTTTCTCTTCTGGCCCCCACACACTGGCAGACCC...TCCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp GGAGGGGAGGAGGCAAGGCCAACCTCCAGTCCCTGCTCTAAACCCCCATGTAGTTCAGGTGTGGCTCTGTaGCTTCCTTTGGCCACAGAA +
Preference number: 4 (lower is better)
Translates to: GGEEARPTSSPCSKPPCSSGVAL*LPLATE
Trigger: TTCTGTGGCCAAAGGAAGCCACAGAGCCACACCTGA...ACTACATGGGGGTTTAGAGCAGGGACTGGAGGTTGGCCTTGCCTCCTCCCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CCTAGGTGGATGCTGCATGACTGGCCCTCAGACACACGGCAGACCATAACTCACCAGCCCCACGCTGGGTaGCTGCTTGTACTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: PRWMLHDWPSDTRQTITHQPHAG*LLVLLH
Trigger: ATGGAGAAGTACAAGCAGCCACCCAGCGTGGGGCTG...GTGAGTTATGGTCTGCCGTGTGTCTGAGGGCCAGTCATGCAGCATCCACCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AGGGGCTCTGCTCATCACAGGCTATCAAGGATGACAGCAGACCCCTCCCTTCTGCAGCCCCACGCTGGGTaGCTGCTTGTACTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: RGSAHHRLSRMTADPSLLQPHAG*LLVLLH
Trigger: ATGGAGAAGTACAAGCAGCCACCCAGCGTGGGGCTG...CAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCACAACCAGCCCCACGCTaGGTGGCTGCTTGTACTTCT +
Preference number: 4 (lower is better)
Translates to: PGHHHFKALPSFLGRAQPQPAPR*VAACTS
Trigger: AGAAGTACAAGCAGCCACCCAGCGTGGGGCTGGTTG...TGGTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AGGGGCTCTGCTCATCACAGGCTATCAAGGATGACAGCAGACCCCTCCCTTCTGTATGTTGCCCTGGGATaGATGCAGGCCCCTCCCATC +
Preference number: 4 (lower is better)
Translates to: RGSAHHRLSRMTADPSLLYVALG*MQAPPI
Trigger: GATGGGAGGGGCCTGCATCCATCCCAGGGCAACATA...CAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CCTAGGTGGATGCTGCATGACTGGCCCTCAGACACACGGCAGACCATAACTCACTATGTTGCCCTGGGATaGATGCAGGCCCCTCCCATC +
Preference number: 4 (lower is better)
Translates to: PRWMLHDWPSDTRQTITHYVALG*MQAPPI
Trigger: GATGGGAGGGGCCTGCATCCATCCCAGGGCAACATA...GTGAGTTATGGTCTGCCGTGTGTCTGAGGGCCAGTCATGCAGCATCCACCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AGGGGCTCTGCTCATCACAGGCTATCAAGGATGACAGCAGACCCCTCCCTTCTGCTGCACACAGGCATGTaGAGACCACAGAAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: RGSAHHRLSRMTADPSLLLHTGM*RPQKPA
Trigger: GGCAGGCTTCTGTGGTCTCCACATGCCTGTGTGCAG...CAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCAAGTGCGCCACCGAGAAACTaGGGCCCGCAGACCGAAGGC +
Preference number: 4 (lower is better)
Translates to: RGHRCGQNYVPSIFLCSSAPPRN*GPQTEG
Trigger: GCCTTCGGTCTGCGGGCCTCAGTTTCTCGGTGGCGC...ACTTGAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328554.9
CDS-3UTR TCA 90 bp TGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGATCTCGCAGACACGGCTaGTGTTGTCCTGATAGTGCT +
Preference number: 4 (lower is better)
Translates to: CLEGHARVHRCLHPTCAGSRRHG*CCPDSA
Trigger: AGCACTATCAGGACAACATCAGCCGTGTCTGCGAGA...TCCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp AGCAGGGAAAGGGCACAGGGCGGAGGTCAAGCTCTGCTGGAGTTGGGGGAGCTGAAACTGTTCGGGTCTTaGACAACTTCCTTGAGATCC +
Preference number: 4 (lower is better)
Translates to: SRERAQGGGQALLELGELKLFGS*TTSLRS
Trigger: GGATCTCAAGGAAGTTGTTCAAGACCCGAACAGTTT...CAGCTCCCCCAACTCCAGCAGAGCTTGACCTCCGCCCTGTGCCCTTTCCCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CTGTGCAGGAAACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCGGCAGGAGGATTAGCTaGCTCCGACAGTCTAGGGAC +
Preference number: 4 (lower is better)
Translates to: LCRKPGHHHFKALPSFLGGRRIS*LRQSRD
Trigger: GTCCCTAGACTGTCGGAGTCAGCTAATCCTCCTGCC...GCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp ACACACTGCACACACTGGGCGGCTGTACCTGCCTATCCTGTGGTAAACTTGGCTCCCAGCTATGGGGTCTaGAGTCATCTGGGGACACCA +
Preference number: 4 (lower is better)
Translates to: THCTHWAAVPAYPVVNLAPSYGV*SHLGTP
Trigger: TGGTGTCCCCAGATGACTTCAGACCCCATAGCTGGG...AGCCAAGTTTACCACAGGATAGGCAGGTACAGCCGCCCAGTGTGTGCAGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp AACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACACCAGGCCACAGAGCTaGCTAAGACAGAGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: NLDITTSRPYLPFWAEPNTRPQS*LRQSPC
Trigger: ACAGGGGCTCTGTCTTAGTCAGCTCTGTGGCCTGGT...GTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CTGTGCAGGAAACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCCCACAGCTGCAATGCTaGCCTGGAATGCTCATGGCC +
Preference number: 4 (lower is better)
Translates to: LCRKPGHHHFKALPSFLGPQLQC*PGMLMA
Trigger: GGCCATGAGCATTCCAGGTCAGCATTGCAGCTGTGG...GCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp TCAAGGATGACAGCAGACCCCTCCCTTCTGCCGCAGTTACACTTACAGGTGGACCCCACCCAGCTTCTTTaGTCAGACCCTTGGACCCTC +
Preference number: 4 (lower is better)
Translates to: SRMTADPSLLPQLHLQVDPTQLL*SDPWTL
Trigger: GAGGGTCCAAGGGTCTGATCAAAGAAGCTGGGTGGG...GTCCACCTGTAAGTGTAACTGCGGCAGAAGGGAGGGGTCTGCTGTCATCCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp ACACACTGCACACACTGGGCGGCTGTACCTGCCTATCCTGTGGTAAACTTGGCTCATCAGGGAGCAGTCTaGCCCAACCCACAAAAGGGG +
Preference number: 4 (lower is better)
Translates to: THCTHWAAVPAYPVVNLAHQGAV*PNPQKG
Trigger: CCCCTTTTGTGGGTTGGGTCAGACTGCTCCCTGATG...AGCCAAGTTTACCACAGGATAGGCAGGTACAGCCGCCCAGTGTGTGCAGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp GGCAAGGGGCTTGCATCCCACCTTCCTGCATCCAAACCTTCCAGCTGCCCAGAATGGTCATCATCTGTCTaGAAGCAGGTGCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GKGLASHLPASKPSSCPEWSSSV*KQVLQQ
Trigger: CTGCTGCAGCACCTGCTTTCAGACAGATGATGACCA...TTCTGGGCAGCTGGAAGGTTTGGATGCAGGAAGGTGGGATGCAAGCCCCTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp GAAAACCCCTCCTTGTGTGGAACAGGTCTTTCTTCATTCCATTCCTCTGGGCCTAGGCTCTGCAGCTCCTaGGCACCCTGCCTTCGGGTC +
Preference number: 4 (lower is better)
Translates to: ENPSLCGTGLSSFHSSGPRLCSS*APCLRV
Trigger: GACCCGAAGGCAGGGTGCTCAGGAGCTGCAGAGCCT...AGGCCCAGAGGAATGGAATGAAGAAAGACCTGTTCCACACAAGGAGGGGTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp TGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGACAATCTGGCTCATGCTaGCTGATCCTGCAGGGTAAC +
Preference number: 4 (lower is better)
Translates to: CLEGHARVHRCLHPTCAGQSGSC*LILQGN
Trigger: GTTACCCTGCAGGATCAGTCAGCATGAGCCAGATTG...TCCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp GGCAAGGGGCTTGCATCCCACCTTCCTGCATCCAAACCTTCCAGCTGCCCAGAATGTACTTCTCCATACTaGGCACCCCAGCCCATAGGA +
Preference number: 4 (lower is better)
Translates to: GKGLASHLPASKPSSCPECTSPY*APQPIG
Trigger: TCCTATGGGCTGGGGTGCTCAGTATGGAGAAGTACA...TTCTGGGCAGCTGGAAGGTTTGGATGCAGGAAGGTGGGATGCAAGCCCCTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CTCTGCTGGAGTTGGGGGAGCTGGTTCTGCTCAGCGCAGAGTCCAAAACAAGCGTGTACTTCTCCATACTaGGCACCCCAGCCCATAGGA +
Preference number: 4 (lower is better)
Translates to: LCWSWGSWFCSAQSPKQACTSPY*APQPIG
Trigger: TCCTATGGGCTGGGGTGCTCAGTATGGAGAAGTACA...CGCTTGTTTTGGACTCTGCGCTGAGCAGAACCAGCTCCCCCAACTCCAGCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCACATGAGGGTGGGCCCTaGTCCAATAGACTAGTGAGC +
Preference number: 4 (lower is better)
Translates to: PGHHHFKALPSFLGRAQPHEGGP*SNRLVS
Trigger: GCTCACTAGTCTATTGGATCAGGGCCCACCCTCATG...TGGTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CATACAGGAACGAGGTCCCAACAGGGCAGACGTGGCAGACCCAGTTCAGTCCCATGGACAGATGTGGCTTaGACGACACAACAGGACAGG +
Preference number: 4 (lower is better)
Translates to: HTGTRSQQGRRGRPSSVPWTDVA*TTQQDR
Trigger: CCTGTCCTGTTGTGTCGTGCAAGCCACATCTGTCCA...TGGGACTGAACTGGGTCTGCCACGTCTGCCCTGTTGGGACCTCGTTCCTGTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CTCTGCTGGAGTTGGGGGAGCTGGTTCTGCTCAGCGCAGAGTCCAAAACAAGCGCTAGCTGTGCTCTTCTaGTCCATGGTCGTTCGCACA +
Preference number: 4 (lower is better)
Translates to: LCWSWGSWFCSAQSPKQALAVLF*SMVVRT
Trigger: TGTGCGAACGACCATGGAGCAGAAGAGCACAGCTAG...CGCTTGTTTTGGACTCTGCGCTGAGCAGAACCAGCTCCCCCAACTCCAGCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CATACAGGAACGAGGTCCCAACAGGGCAGACGTGGCAGACCCAGTTCAGTCCCACTAGCTGTGCTCTTCTaGTCCATGGTCGTTCGCACA +
Preference number: 4 (lower is better)
Translates to: HTGTRSQQGRRGRPSSVPLAVLF*SMVVRT
Trigger: TGTGCGAACGACCATGGAGCAGAAGAGCACAGCTAG...TGGGACTGAACTGGGTCTGCCACGTCTGCCCTGTTGGGACCTCGTTCCTGTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CTGTGCAGGAAACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCCTGGGGACACCACTCTaGTCTGACTGGGGACTATGG +
Preference number: 4 (lower is better)
Translates to: LCRKPGHHHFKALPSFLGLGTPL*SDWGLW
Trigger: CCATAGTCCCCAGTCAGAGCAGAGTGGTGTCCCCAG...GCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp ACACACTGCACACACTGGGCGGCTGTACCTGCCTATCCTGTGGTAAACTTGGCTCTGGGGACACCACTCTaGTCTGACTGGGGACTATGG +
Preference number: 4 (lower is better)
Translates to: THCTHWAAVPAYPVVNLALGTPL*SDWGLW
Trigger: CCATAGTCCCCAGTCAGAGCAGAGTGGTGTCCCCAG...AGCCAAGTTTACCACAGGATAGGCAGGTACAGCCGCCCAGTGTGTGCAGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCATGGGGGAGCTGGTTCTaGTCAGCGCAGAGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: PGHHHFKALPSFLGRAQPWGSWF*SAQSPK
Trigger: TTTTGGACTCTGCGCTGAGCAGAACCAGCTCCCCCA...TGGTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp TGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGATGCATCCCACCTTCCTaGATCCAAACCTTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: CLEGHARVHRCLHPTCAGCIPPS*IQTFQL
Trigger: CAGCTGGAAGGTTTGGATGCAGGAAGGTGGGATGCA...TCCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CCTAGGTGGATGCTGCATGACTGGCCCTCAGACACACGGCAGACCATAACTCACCTGGTAGGCAGCCACTaGACCACCTCAGCCAGTAAT +
Preference number: 4 (lower is better)
Translates to: PRWMLHDWPSDTRQTITHLVGSH*TTSASN
Trigger: ATTACTGGCTGAGGTGGTGCAGTGGCTGCCTACCAG...GTGAGTTATGGTCTGCCGTGTGTCTGAGGGCCAGTCATGCAGCATCCACCTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CCTAGGTGGATGCTGCATGACTGGCCCTCAGACACACGGCAGACCATAACTCACGACCCTCAAAGCCCCTaGCAGAAACCACAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: PRWMLHDWPSDTRQTITHDPQSP*QKPQLQ
Trigger: TTGCAGCTGTGGTTTCTGGCAGGGGCTTTGAGGGTC...GTGAGTTATGGTCTGCCGTGTGTCTGAGGGCCAGTCATGCAGCATCCACCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCAGACCCTCAAAGCCCCTaGCAGAAACCACAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: PGHHHFKALPSFLGRAQPDPQSP*QKPQLQ
Trigger: TTGCAGCTGTGGTTTCTGGCAGGGGCTTTGAGGGTC...TGGTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CATACAGGAACGAGGTCCCAACAGGGCAGACGTGGCAGACCCAGTTCAGTCCCACTGGGCGGCTGTACCTaGCTATCCTGTGGTAAACTT +
Preference number: 4 (lower is better)
Translates to: HTGTRSQQGRRGRPSSVPLGGCT*LSCGKL
Trigger: AAGTTTACCACAGGATAGGCAGGTACAGCCGCCCAG...TGGGACTGAACTGGGTCTGCCACGTCTGCCCTGTTGGGACCTCGTTCCTGTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp TCAAGGATGACAGCAGACCCCTCCCTTCTGCCGCAGTTACACTTACAGGTGGACAGAGTGGGCACACACTaGACACACTGGGCGGCTGTA +
Preference number: 4 (lower is better)
Translates to: SRMTADPSLLPQLHLQVDRVGTH*THWAAV
Trigger: TACAGCCGCCCAGTGTGTGCAGTGTGTGCCCACTCT...GTCCACCTGTAAGTGTAACTGCGGCAGAAGGGAGGGGTCTGCTGTCATCCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CATACAGGAACGAGGTCCCAACAGGGCAGACGTGGCAGACCCAGTTCAGTCCCAACAGGTGTGAGACACTaGTCCCGGCCAGTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: HTGTRSQQGRRGRPSSVPTGVRH*SRPVSE
Trigger: TTCAGAAACTGGCCGGGAGCAGTGTCTCACACCTGT...TGGGACTGAACTGGGTCTGCCACGTCTGCCCTGTTGGGACCTCGTTCCTGTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CTCTGCTGGAGTTGGGGGAGCTGGTTCTGCTCAGCGCAGAGTCCAAAACAAGCGCCAGCTCACTTGCTTTaGTACCAGGGCTATACCTGC +
Preference number: 4 (lower is better)
Translates to: LCWSWGSWFCSAQSPKQAPAHLL*YQGYTC
Trigger: GCAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCTGG...CGCTTGTTTTGGACTCTGCGCTGAGCAGAACCAGCTCCCCCAACTCCAGCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp AGGGGCTCTGCTCATCACAGGCTATCAAGGATGACAGCAGACCCCTCCCTTCTGTGCCTAGGTGGATGCTaGATGACTGGCCCTCAGACA +
Preference number: 4 (lower is better)
Translates to: RGSAHHRLSRMTADPSLLCLGGC*MTGPQT
Trigger: TGTCTGAGGGCCAGTCATGCAGCATCCACCTAGGCA...CAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CTCTGCTGGAGTTGGGGGAGCTGGTTCTGCTCAGCGCAGAGTCCAAAACAAGCGAAGGACTCTCAAGCCTaGCTAGGTGGATGCTGCATG +
Preference number: 4 (lower is better)
Translates to: LCWSWGSWFCSAQSPKQAKDSQA*LGGCCM
Trigger: CATGCAGCATCCACCTAGGCAGGCTTGAGAGTCCTT...CGCTTGTTTTGGACTCTGCGCTGAGCAGAACCAGCTCCCCCAACTCCAGCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CCTAGGTGGATGCTGCATGACTGGCCCTCAGACACACGGCAGACCATAACTCACCCTCCACCCTACCTGTaGAGGAAACCTGGACATCAC +
Preference number: 4 (lower is better)
Translates to: PRWMLHDWPSDTRQTITHPPPYL*RKPGHH
Trigger: GTGATGTCCAGGTTTCCTGCACAGGTAGGGTGGAGG...GTGAGTTATGGTCTGCCGTGTGTCTGAGGGCCAGTCATGCAGCATCCACCTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp AACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACGCCAGAGTCCATCGTTaGCTCCACCCTACCTGTGCA +
Preference number: 4 (lower is better)
Translates to: NLDITTSRPYLPFWAEPNARVHR*LHPTCA
Trigger: TGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGC...GTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CTGTGCAGGAAACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGGAGCTGTGTGCACTaGCTGTCTGGAAGGCCATGC +
Preference number: 4 (lower is better)
Translates to: LCRKPGHHHFKALPSFLGRSCVH*LSGRPC
Trigger: GCATGGCCTTCCAGACAGGCAGTGCACACAGCTCCT...GCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CCTAGGTGGATGCTGCATGACTGGCCCTCAGACACACGGCAGACCATAACTCACCTGAAAGGAGCTGTGTaGACTGCCTGTCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: PRWMLHDWPSDTRQTITHLKGAV*TACLEG
Trigger: GCCTTCCAGACAGGCAGTGCACACAGCTCCTTTCAG...GTGAGTTATGGTCTGCCGTGTGTCTGAGGGCCAGTCATGCAGCATCCACCTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp GGCAAGGGGCTTGCATCCCACCTTCCTGCATCCAAACCTTCCAGCTGCCCAGAACTGTCTGAAAGCAGGTaGTGCAGCAGCTGGCAACAA +
Preference number: 4 (lower is better)
Translates to: GKGLASHLPASKPSSCPELSESR*CSSWQQ
Trigger: TTGTTGCCAGCTGCTGCAGCACCTGCTTTCAGACAG...TTCTGGGCAGCTGGAAGGTTTGGATGCAGGAAGGTGGGATGCAAGCCCCTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp AGCAGGGAAAGGGCACAGGGCGGAGGTCAAGCTCTGCTGGAGTTGGGGGAGCTGGGAGATCTTTGTTACTaGAGCACAATCTGGCTCATG +
Preference number: 4 (lower is better)
Translates to: SRERAQGGGQALLELGELGDLCY*STIWLM
Trigger: CATGAGCCAGATTGTGCTGCAGTAACAAAGATCTCC...CAGCTCCCCCAACTCCAGCAGAGCTTGACCTCCGCCCTGTGCCCTTTCCCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CATACAGGAACGAGGTCCCAACAGGGCAGACGTGGCAGACCCAGTTCAGTCCCAGACAAACAGGTATGTTaGCCTGGGATGGATGCAGGC +
Preference number: 4 (lower is better)
Translates to: HTGTRSQQGRRGRPSSVPDKQVC*PGMDAG
Trigger: GCCTGCATCCATCCCAGGGCAACATACCTGTTTGTC...TGGGACTGAACTGGGTCTGCCACGTCTGCCCTGTTGGGACCTCGTTCCTGTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp TGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGAAGGAGAAACCAACCCTaGCCACACCTTGATCTCAGG +
Preference number: 4 (lower is better)
Translates to: CLEGHARVHRCLHPTCAGRRNQP*PHLDLR
Trigger: CCTGAGATCAAGGTGTGGGCAGGGTTGGTTTCTCCT...TCCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CCTAGGTGGATGCTGCATGACTGGCCCTCAGACACACGGCAGACCATAACTCACAAGAAGATGGCTATCTaGAGGCCAAGGAGCGAGGCC +
Preference number: 4 (lower is better)
Translates to: PRWMLHDWPSDTRQTITHKKMAI*RPRSEA
Trigger: GGCCTCGCTCCTTGGCCTGCAGATAGCCATCTTCTT...GTGAGTTATGGTCTGCCGTGTGTCTGAGGGCCAGTCATGCAGCATCCACCTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CCTAGGTGGATGCTGCATGACTGGCCCTCAGACACACGGCAGACCATAACTCACGTGCGTTGGCATAATTaGCGGCTGCCCAGATGGGAA +
Preference number: 4 (lower is better)
Translates to: PRWMLHDWPSDTRQTITHVRWHN*RLPRWE
Trigger: TTCCCATCTGGGCAGCCGCCAATTATGCCAACGCAC...GTGAGTTATGGTCTGCCGTGTGTCTGAGGGCCAGTCATGCAGCATCCACCTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp GAAAACCCCTCCTTGTGTGGAACAGGTCTTTCTTCATTCCATTCCTCTGGGCCTTGTGGGGTCGGGAGCTaGGCATGTGCCCAGCTAGGG +
Preference number: 4 (lower is better)
Translates to: ENPSLCGTGLSSFHSSGPCGVGS*ACAQLG
Trigger: CCCTAGCTGGGCACATGCCCAGCTCCCGACCCCACA...AGGCCCAGAGGAATGGAATGAAGAAAGACCTGTTCCACACAAGGAGGGGTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AGCTCACTTGCTTTGCTACCAGGGCTATACCTGCTTTCTAAAAATAGCTTCCCAGGGGCCACTGGCAGCTaGCTGGAGGCCAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SSLALLPGLYLLSKNSFPGATGS*LEARGR
Trigger: CCTGCCCCTGGCCTCCAGCCAGCTGCCAGTGGCCCC...TGGGAAGCTATTTTTAGAAAGCAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCAAGTCAGCTGAGGGGCCACTaGCAGCTGGCTGGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: RGHRCGQNYVPSIFLCSSQLRGH*QLAGGQ
Trigger: CTGGCCTCCAGCCAGCTGCCAGTGGCCCCTCAGCTG...ACTTGAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTGTGCAGGAAACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCGCTGGGTCTGGTCTCTaGGCAGGAGGATTAGCTGAC +
Preference number: 4 (lower is better)
Translates to: LCRKPGHHHFKALPSFLGAGSGL*AGGLAD
Trigger: GTCAGCTAATCCTCCTGCCCAGAGACCAGACCCAGC...GCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CATACAGGAACGAGGTCCCAACAGGGCAGACGTGGCAGACCCAGTTCAGTCCCACATCTTGCCCAGCTATaGGGTCTGAAGTCATCTGGG +
Preference number: 4 (lower is better)
Translates to: HTGTRSQQGRRGRPSSVPHLAQL*GLKSSG
Trigger: CCCAGATGACTTCAGACCCCATAGCTGGGCAAGATG...TGGGACTGAACTGGGTCTGCCACGTCTGCCCTGTTGGGACCTCGTTCCTGTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp TGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGACATCTTGCCCAGCTATaGGGTCTGAAGTCATCTGGG +
Preference number: 4 (lower is better)
Translates to: CLEGHARVHRCLHPTCAGHLAQL*GLKSSG
Trigger: CCCAGATGACTTCAGACCCCATAGCTGGGCAAGATG...TCCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCAGTCCAAGCACCAGAGTaGGCACACACTGCACACACT +
Preference number: 4 (lower is better)
Translates to: PGHHHFKALPSFLGRAQPVQAPE*AHTAHT
Trigger: AGTGTGTGCAGTGTGTGCCCACTCTGGTGCTTGGAC...TGGTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTGTGCAGGAAACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCTCAAGCCTGCCTAGGTaGATGCTGCATGACTGGCCC +
Preference number: 4 (lower is better)
Translates to: LCRKPGHHHFKALPSFLGSSLPR*MLHDWP
Trigger: GGGCCAGTCATGCAGCATCCACCTAGGCAGGCTTGA...GCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp GGAGGGGAGGAGGCAAGGCCAACCTCCAGTCCCTGCTCTAAACCCCCATGTAGTAAAAACCAGGTCACCTaGACTCTCCCAAGGACTCTC +
Preference number: 4 (lower is better)
Translates to: GGEEARPTSSPCSKPPCSKNQVT*TLPRTL
Trigger: GAGAGTCCTTGGGAGAGTCCAGGTGACCTGGTTTTT...ACTACATGGGGGTTTAGAGCAGGGACTGGAGGTTGGCCTTGCCTCCTCCCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp GGCAAGGGGCTTGCATCCCACCTTCCTGCATCCAAACCTTCCAGCTGCCCAGAACCCTACCTTCCTTTCTaGGCAGAGCCCAACCACAAT +
Preference number: 4 (lower is better)
Translates to: GKGLASHLPASKPSSCPEPYLPF*AEPNHN
Trigger: ATTGTGGTTGGGCTCTGCCCAGAAAGGAAGGTAGGG...TTCTGGGCAGCTGGAAGGTTTGGATGCAGGAAGGTGGGATGCAAGCCCCTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCAAACCATGACCACCCCTaGCAAGAGCCTTCATGCACC +
Preference number: 4 (lower is better)
Translates to: PGHHHFKALPSFLGRAQPNHDHP*QEPSCT
Trigger: GGTGCATGAAGGCTCTTGCCAGGGGTGGTCATGGTT...TGGTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTGTGCAGGAAACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCGCTGCTGCCGTCCTATaGAACTCAGGTGTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: LCRKPGHHHFKALPSFLGAAAVL*NSGVAL
Trigger: CAGAGCCACACCTGAGTTCCATAGGACGGCAGCAGC...GCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTGTGCAGGAAACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCCAGCCCCACGCTGGGTaGCTGCTTGTACTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: LCRKPGHHHFKALPSFLGQPHAG*LLVLLH
Trigger: ATGGAGAAGTACAAGCAGCCACCCAGCGTGGGGCTG...GCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTCTGCTGGAGTTGGGGGAGCTGGTTCTGCTCAGCGCAGAGTCCAAAACAAGCGGACACGGCAAGAAGATaGCTATCTGCAGGCCAAGGA +
Preference number: 4 (lower is better)
Translates to: LCWSWGSWFCSAQSPKQADTARR*LSAGQG
Trigger: TCCTTGGCCTGCAGATAGCCATCTTCTTGCCGTGTC...CGCTTGTTTTGGACTCTGCGCTGAGCAGAACCAGCTCCCCCAACTCCAGCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CCATATTTATTTGGCCCGTTTCAAAGTCCTCTATTCTCTGCTCATCTGTCCACAGGACGGGCCTCCCTCTaGGGGCGAGAGTCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: PYLFGPFQSPLFSAHLSTGRASL*GRESRR
Trigger: GCGCCTGGACTCTCGCCCTCAGAGGGAGGCCCGTCC...TGTGGACAGATGAGCAGAGAATAGAGGACTTTGAAACGGGCCAAATAAATATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCCAGGACAGGGATGGCTaGACAGGGCGTGGCAGACCC +
Preference number: 4 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFQDRDG*TGRGRP
Trigger: GGGTCTGCCACGCCCTGTTCAGCCATCCCTGTCCTG...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCGGCCTGTTAGGCGCCTaGGGATCTCGCAGACACGGC +
Preference number: 4 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFGLLGA*GSRRHG
Trigger: GCCGTGTCTGCGAGATCCTCAGGCGCCTAACAGGCC...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CTGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGCTTGAACAACTTCCTTaGGATCCTGGCAGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: LSGRPCQSPSLPPPYLCRLEQLP*DPGRRA
Trigger: AGCTCTTCTGCCAGGATCTCAAGGAAGTTGTTCAAG...CCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp ACACACTGCACACACTGGGCGGCTGTACCTGCCTATCCTGTGGTAAACTTGGCTCAGGCCACTTCATCATaGGGGGCAGCATTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: THCTHWAAVPAYPVVNLAQATSS*GAALFP
Trigger: TGGGAACAATGCTGCCCCTCATGATGAAGTGGCCTG...AGCCAAGTTTACCACAGGATAGGCAGGTACAGCCGCCCAGTGTGTGCAGTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCGGGAGCAGGCCTGGGTaGGACGGCACTCCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFGSRPG*DGTPRR
Trigger: TCTTCTGGGAGTGCCGTCTCACCCAGGCCTGCTCCC...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CCTAGGTGGATGCTGCATGACTGGCCCTCAGACACACGGCAGACCATAACTCACGCAACAAAGCCACTCTaGAAGGAGCTGTGTGCACTG +
Preference number: 4 (lower is better)
Translates to: PRWMLHDWPSDTRQTITHATKPL*KELCAL
Trigger: CAGTGCACACAGCTCCTTTCAGAGTGGCTTTGTTGC...GTGAGTTATGGTCTGCCGTGTGTCTGAGGGCCAGTCATGCAGCATCCACCTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CAAAACGACCCCCTCGTGGGAGCAGGCCTGGGTGAGACGGCACTCCCAGAAGACTACTGGCATAAAGAGTaGGGCACATACATGGCTTTA +
Preference number: 4 (lower is better)
Translates to: QNDPLVGAGLGETALPEDYWHKE*GTYMAL
Trigger: TAAAGCCATGTATGTGCCTCACTCTTTATGCCAGTA...GTCTTCTGGGAGTGCCGTCTCACCCAGGCCTGCTCCCACGAGGGGGTCGTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp GGAGGGGAGGAGGCAAGGCCAACCTCCAGTCCCTGCTCTAAACCCCCATGTAGTCTTCTAACCACCCCATaGGGAAAAACTCTGGTCACA +
Preference number: 4 (lower is better)
Translates to: GGEEARPTSSPCSKPPCSLLTTP*GKTLVT
Trigger: TGTGACCAGAGTTTTTCCTCATGGGGTGGTTAGAAG...ACTACATGGGGGTTTAGAGCAGGGACTGGAGGTTGGCCTTGCCTCCTCCCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CTGTGCAGGAAACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCCTGCTGCCATGGATGTaGGTTGGCATAATTGGCGGC +
Preference number: 4 (lower is better)
Translates to: LCRKPGHHHFKALPSFLGLLPWM*VGIIGG
Trigger: GCCGCCAATTATGCCAACGCACATCCATGGCAGCAG...GCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp TCAAGGATGACAGCAGACCCCTCCCTTCTGCCGCAGTTACACTTACAGGTGGACCTGCTGCCATGGATGTaGGTTGGCATAATTGGCGGC +
Preference number: 4 (lower is better)
Translates to: SRMTADPSLLPQLHLQVDLLPWM*VGIIGG
Trigger: GCCGCCAATTATGCCAACGCACATCCATGGCAGCAG...GTCCACCTGTAAGTGTAACTGCGGCAGAAGGGAGGGGTCTGCTGTCATCCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCACTAGCTGTGCTCTTCTaGTCCATGGTCGTTCGCACA +
Preference number: 4 (lower is better)
Translates to: PGHHHFKALPSFLGRAQPLAVLF*SMVVRT
Trigger: TGTGCGAACGACCATGGAGCAGAAGAGCACAGCTAG...TGGTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CATACAGGAACGAGGTCCCAACAGGGCAGACGTGGCAGACCCAGTTCAGTCCCATCCTTGGTCAGCTGCTaGTCGAACAGAGCACTTCTA +
Preference number: 4 (lower is better)
Translates to: HTGTRSQQGRRGRPSSVPSLVSC*SNRALL
Trigger: TAGAAGTGCTCTGTTCGAGCAGCAGCTGACCAAGGA...TGGGACTGAACTGGGTCTGCCACGTCTGCCCTGTTGGGACCTCGTTCCTGTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCACTCTCCTTGGTCAGCTaGTGCTCGAACAGAGCACTT +
Preference number: 4 (lower is better)
Translates to: PGHHHFKALPSFLGRAQPLSLVS*CSNRAL
Trigger: AAGTGCTCTGTTCGAGCAGCAGCTGACCAAGGAGAG...TGGTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CCTAGGTGGATGCTGCATGACTGGCCCTCAGACACACGGCAGACCATAACTCACCTCTCCTTGGTCAGCTaGTGCTCGAACAGAGCACTT +
Preference number: 4 (lower is better)
Translates to: PRWMLHDWPSDTRQTITHLSLVS*CSNRAL
Trigger: AAGTGCTCTGTTCGAGCAGCAGCTGACCAAGGAGAG...GTGAGTTATGGTCTGCCGTGTGTCTGAGGGCCAGTCATGCAGCATCCACCTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CTGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGAAAACAAGCGCATCTTaGCCAGCTATGGGGTCTGAA +
Preference number: 4 (lower is better)
Translates to: LSGRPCQSPSLPPPYLCRKTSAS*PAMGSE
Trigger: TTCAGACCCCATAGCTGGGCAAGATGCGCTTGTTTT...CCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp GGAGGGGAGGAGGCAAGGCCAACCTCCAGTCCCTGCTCTAAACCCCCATGTAGTCATTCTTTGCCAAGATaGTATCCCACTCATCCCCCA +
Preference number: 4 (lower is better)
Translates to: GGEEARPTSSPCSKPPCSHSLPR*YPTHPP
Trigger: TGGGGGATGAGTGGGATAGCATCTTGGCAAAGAATG...ACTACATGGGGGTTTAGAGCAGGGACTGGAGGTTGGCCTTGCCTCCTCCCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CTCTGCTGGAGTTGGGGGAGCTGGTTCTGCTCAGCGCAGAGTCCAAAACAAGCGTCCAAACCTTCCAGCTaGCCAGAACTGCTGGTAATC +
Preference number: 4 (lower is better)
Translates to: LCWSWGSWFCSAQSPKQASKPSS*PELLVI
Trigger: GATTACCAGCAGTTCTGGGCAGCTGGAAGGTTTGGA...CGCTTGTTTTGGACTCTGCGCTGAGCAGAACCAGCTCCCCCAACTCCAGCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CTGTGCAGGAAACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGTCAGTTCTCTACCTaGAGAGCCACCCACCCCCTA +
Preference number: 4 (lower is better)
Translates to: LCRKPGHHHFKALPSFLGSQFST*RATHPL
Trigger: TAGGGGGTGGGTGGCTCTGCAGGTAGAGAACTGACT...GCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CTGTGCAGGAAACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCACAGCTCTGGACTGCTaGCTGGTCCTCACTTCACCT +
Preference number: 4 (lower is better)
Translates to: LCRKPGHHHFKALPSFLGTALDC*LVLTSP
Trigger: AGGTGAAGTGAGGACCAGGCAGCAGTCCAGAGCTGT...GCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CTGTGCAGGAAACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCCTCACAGCTCTGGACTaGTGCCTGGTCCTCACTTCA +
Preference number: 4 (lower is better)
Translates to: LCRKPGHHHFKALPSFLGLTALD*CLVLTS
Trigger: TGAAGTGAGGACCAGGCAGCAGTCCAGAGCTGTGAG...GCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp AACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACTTGTCCAGGCTGGAGTaGAATGGCGTGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: NLDITTSRPYLPFWAEPNLSRLE*NGVISA
Trigger: AGCCGAGATCACGCCATTGCACTCCAGCCTGGACAA...GTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp AGCAGGGAAAGGGCACAGGGCGGAGGTCAAGCTCTGCTGGAGTTGGGGGAGCTGAAAATGGGTTTCTTCTaGCAGCTCACTTGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: SRERAQGGGQALLELGELKMGFF*QLTCFA
Trigger: AGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTT...CAGCTCCCCCAACTCCAGCAGAGCTTGACCTCCGCCCTGTGCCCTTTCCCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp TCAAGGATGACAGCAGACCCCTCCCTTCTGCCGCAGTTACACTTACAGGTGGACTGCCTAGGTGGATGCTaGATGACTGGCCCTCAGACA +
Preference number: 4 (lower is better)
Translates to: SRMTADPSLLPQLHLQVDCLGGC*MTGPQT
Trigger: TGTCTGAGGGCCAGTCATGCAGCATCCACCTAGGCA...GTCCACCTGTAAGTGTAACTGCGGCAGAAGGGAGGGGTCTGCTGTCATCCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CTGTGCAGGAAACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCCTGTCTGGAAGGCCATaGCAGAGTCCATCGTTGCCT +
Preference number: 4 (lower is better)
Translates to: LCRKPGHHHFKALPSFLGLSGRP*QSPSLP
Trigger: AGGCAACGATGGACTCTGGCATGGCCTTCCAGACAG...GCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp TCAAGGATGACAGCAGACCCCTCCCTTCTGCCGCAGTTACACTTACAGGTGGACCTGTCTGGAAGGCCATaGCAGAGTCCATCGTTGCCT +
Preference number: 4 (lower is better)
Translates to: SRMTADPSLLPQLHLQVDLSGRP*QSPSLP
Trigger: AGGCAACGATGGACTCTGGCATGGCCTTCCAGACAG...GTCCACCTGTAAGTGTAACTGCGGCAGAAGGGAGGGGTCTGCTGTCATCCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp ACACACTGCACACACTGGGCGGCTGTACCTGCCTATCCTGTGGTAAACTTGGCTCTGTCTGGAAGGCCATaGCAGAGTCCATCGTTGCCT +
Preference number: 4 (lower is better)
Translates to: THCTHWAAVPAYPVVNLALSGRP*QSPSLP
Trigger: AGGCAACGATGGACTCTGGCATGGCCTTCCAGACAG...AGCCAAGTTTACCACAGGATAGGCAGGTACAGCCGCCCAGTGTGTGCAGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCAAGTCCCTGCCTTCGGGTCTaGCAGTGTGTGGGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: RGHRCGQNYVPSIFLCSSPCLRV*QCVGAR
Trigger: TCTGGCCCCCACACACTGGCAGACCCGAAGGCAGGG...ACTTGAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp AGGGGCTCTGCTCATCACAGGCTATCAAGGATGACAGCAGACCCCTCCCTTCTGCCCCAGCCAAGGCACTaGATGGGCATCATTCTCATT +
Preference number: 4 (lower is better)
Translates to: RGSAHHRLSRMTADPSLLPQPRH*MGIILI
Trigger: AATGAGAATGATGCCCATGCAGTGCCTTGGCTGGGG...CAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CTGTGCAGGAAACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCACATTACTTGTGGCCTaGTGTGGCCTTTCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: LCRKPGHHHFKALPSFLGTLLVA*CGLSPA
Trigger: GGCAGGGGAAAGGCCACAGCAGGCCACAAGTAATGT...GCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp AACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACAGCACAACTGGGCACTaGCTACTCAACAGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: NLDITTSRPYLPFWAEPNSTTGH*LLNSQG
Trigger: GCCTTGGCTGTTGAGTAGGCAGTGCCCAGTTGTGCT...GTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp GAAAACCCCTCCTTGTGTGGAACAGGTCTTTCTTCATTCCATTCCTCTGGGCCTTGGCTGAACAGGGCGTaGCAGACCCGCACTGGTCCA +
Preference number: 4 (lower is better)
Translates to: ENPSLCGTGLSSFHSSGPWLNRA*QTRTGP
Trigger: TGGACCAGTGCGGGTCTGCCACGCCCTGTTCAGCCA...AGGCCCAGAGGAATGGAATGAAGAAAGACCTGTTCCACACAAGGAGGGGTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTTTATTTGCCTTGCTCCTTTATTGCTGGATCTTTGGGCTTTTCCAGTTCTGCTGGGGCCACTGGCAGCTaGCTGGAGGCCAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LYLPCSFIAGSLGFSSSAGATGS*LEARGR
Trigger: CCTGCCCCTGGCCTCCAGCCAGCTGCCAGTGGCCCC...AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCAAATAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CATACAGGAACGAGGTCCCAACAGGGCAGACGTGGCAGACCCAGTTCAGTCCCATCCTCCTCTGTTTTCTaGGGTTTTGGACCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: HTGTRSQQGRRGRPSSVPSSSVF*GFGPPG
Trigger: TCCAGGAGGTCCAAAACCCCAGAAAACAGAGGAGGA...TGGGACTGAACTGGGTCTGCCACGTCTGCCCTGTTGGGACCTCGTTCCTGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CCTAGGTGGATGCTGCATGACTGGCCCTCAGACACACGGCAGACCATAACTCACAGCATTGTTCCCACCTaGGCTGTGTTCAGAACCCAG +
Preference number: 4 (lower is better)
Translates to: PRWMLHDWPSDTRQTITHSIVPT*AVFRTQ
Trigger: CTGGGTTCTGAACACAGCCCAGGTGGGAACAATGCT...GTGAGTTATGGTCTGCCGTGTGTCTGAGGGCCAGTCATGCAGCATCCACCTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AGGGGCTCTGCTCATCACAGGCTATCAAGGATGACAGCAGACCCCTCCCTTCTGAGGGTAAAGGTCAGCTaGGTGACTAGGCTGTCCATC +
Preference number: 4 (lower is better)
Translates to: RGSAHHRLSRMTADPSLLRVKVS*VTRLSI
Trigger: GATGGACAGCCTAGTCACCCAGCTGACCTTTACCCT...CAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp ACACACTGCACACACTGGGCGGCTGTACCTGCCTATCCTGTGGTAAACTTGGCTCTGTCCAGAAGCCTGTaGGACAGGGTAAAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: THCTHWAAVPAYPVVNLALSRSL*DRVKVS
Trigger: GCTGACCTTTACCCTGTCCCACAGGCTTCTGGACAG...AGCCAAGTTTACCACAGGATAGGCAGGTACAGCCGCCCAGTGTGTGCAGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCTGTCCAGAAGCCTGTaGGACAGGGTAAAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: NLDITTSRPYLPFWAEPNLSRSL*DRVKVS
Trigger: GCTGACCTTTACCCTGTCCCACAGGCTTCTGGACAG...GTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTGTGCAGGAAACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCTCCACTAAAGGGAGATaGGGAAGGTGGCCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: LCRKPGHHHFKALPSFLGSTKGR*GRWPVQ
Trigger: CTGGACAGGCCACCTTCCCCATCTCCCTTTAGTGGA...GCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCACCCTACCTTCCTTTCTaGGCAGAGCCCAACCACAAT +
Preference number: 4 (lower is better)
Translates to: PGHHHFKALPSFLGRAQPPYLPF*AEPNHN
Trigger: ATTGTGGTTGGGCTCTGCCCAGAAAGGAAGGTAGGG...TGGTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AGGGGCTCTGCTCATCACAGGCTATCAAGGATGACAGCAGACCCCTCCCTTCTGCCTGTGCAGGAAACCTaGACATCACCACTTCAAGGC +
Preference number: 4 (lower is better)
Translates to: RGSAHHRLSRMTADPSLLPVQET*TSPLQG
Trigger: GCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAGG...CAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCACCCATACAGCACAACTaGGCACTGCCTACTCAACAG +
Preference number: 4 (lower is better)
Translates to: PGHHHFKALPSFLGRAQPPIQHN*ALPTQQ
Trigger: CTGTTGAGTAGGCAGTGCCCAGTTGTGCTGTATGGG...TGGTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AGGGGCTCTGCTCATCACAGGCTATCAAGGATGACAGCAGACCCCTCCCTTCTGCCCATACAGCACAACTaGGCACTGCCTACTCAACAG +
Preference number: 4 (lower is better)
Translates to: RGSAHHRLSRMTADPSLLPIQHN*ALPTQQ
Trigger: CTGTTGAGTAGGCAGTGCCCAGTTGTGCTGTATGGG...CAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CTGTGCAGGAAACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCTCTCGCAGACACGGCTaGTGTTGTCCTGATAGTGCT +
Preference number: 4 (lower is better)
Translates to: LCRKPGHHHFKALPSFLGSRRHG*CCPDSA
Trigger: AGCACTATCAGGACAACATCAGCCGTGTCTGCGAGA...GCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp AAGACTGAAAATGGGTTTCTTCTGCCAGCTCACTTGCTTTGCTACCAGGGCTATGGGAGCAGGCCTGGGTaGGACGGCACTCCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: KTENGFLLPAHLLCYQGYGSRPG*DGTPRR
Trigger: TCTTCTGGGAGTGCCGTCTCACCCAGGCCTGCTCCC...ATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTTCAGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp GGCAAGGGGCTTGCATCCCACCTTCCTGCATCCAAACCTTCCAGCTGCCCAGAACTATCTGCTGAGAGTTaGTCTACAAAACGACCCCCT +
Preference number: 4 (lower is better)
Translates to: GKGLASHLPASKPSSCPELSAES*STKRPP
Trigger: AGGGGGTCGTTTTGTAGATCAACTCTCAGCAGATAG...TTCTGGGCAGCTGGAAGGTTTGGATGCAGGAAGGTGGGATGCAAGCCCCTTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp AACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCCAGGCCTCTGCTCCTaGCAGAATGGGAAACAAAGA +
Preference number: 4 (lower is better)
Translates to: NLDITTSRPYLPFWAEPNPGLCS*QNGKQR
Trigger: TCTTTGTTTCCCATTCTGTCAGGAGCAGAGGCCTGG...GTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCAAGTTGCCAGACCCACAGGTaGGCCAGGCCACAGTGCACT +
Preference number: 4 (lower is better)
Translates to: RGHRCGQNYVPSIFLCSSCQTHR*ARPQCT
Trigger: AGTGCACTGTGGCCTGGCTCACCTGTGGGTCTGGCA...ACTTGAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp AACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACGCAACAAAGCCACTCTaGAAGGAGCTGTGTGCACTG +
Preference number: 4 (lower is better)
Translates to: NLDITTSRPYLPFWAEPNATKPL*KELCAL
Trigger: CAGTGCACACAGCTCCTTTCAGAGTGGCTTTGTTGC...GTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp AAGACTGAAAATGGGTTTCTTCTGCCAGCTCACTTGCTTTGCTACCAGGGCTATAGGCTCTGCAGCTCCTaGGCACCCTGCCTTCGGGTC +
Preference number: 4 (lower is better)
Translates to: KTENGFLLPAHLLCYQGYRLCSS*APCLRV
Trigger: GACCCGAAGGCAGGGTGCTCAGGAGCTGCAGAGCCT...ATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTTCAGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp GAAAACCCCTCCTTGTGTGGAACAGGTCTTTCTTCATTCCATTCCTCTGGGCCTACCATGGCCCGTCCCTaGGCATGTCCAGCAAACCCT +
Preference number: 4 (lower is better)
Translates to: ENPSLCGTGLSSFHSSGPTMARP*ACPANP
Trigger: AGGGTTTGCTGGACATGCTCAGGGACGGGCCATGGT...AGGCCCAGAGGAATGGAATGAAGAAAGACCTGTTCCACACAAGGAGGGGTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CCTAGGTGGATGCTGCATGACTGGCCCTCAGACACACGGCAGACCATAACTCACGAAGGACTGACACCATaGTTAGAAAGCAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: PRWMLHDWPSDTRQTITHEGLTP*LESRAS
Trigger: GCTGGCTCTGCTTTCTAATCATGGTGTCAGTCCTTC...GTGAGTTATGGTCTGCCGTGTGTCTGAGGGCCAGTCATGCAGCATCCACCTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CTGTGCAGGAAACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCCAATCTGGCTCATGCTaGCTGATCCTGCAGGGTAAC +
Preference number: 4 (lower is better)
Translates to: LCRKPGHHHFKALPSFLGQSGSC*LILQGN
Trigger: GTTACCCTGCAGGATCAGTCAGCATGAGCCAGATTG...GCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp ACAGGTGGACTCAAGGTTGAATGTCAAAGGCAGAAAGTTACAACCTGGGAATACCGCGGACCGAGAAACTaGGGCCCGCAGACCGAAGGC +
Preference number: 4 (lower is better)
Translates to: TGGLKVECQRQKVTTWEYRGPRN*GPQTEG
Trigger: GCCTTCGGTCTGCGGGCCTCAGTTTCTCGGTCCGCG...GTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405640.1
CDS-3UTR GCA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCACCGGCCACGAGGCATaGTGGGAGCACAGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFTGHEA*WEHRGE
Trigger: TTCTCCCCTGTGCTCCCAGCATGCCTCGTGGCCGGT...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCATCCAAACCTTCCAGCTaGCCAGAACTGCTGGTAATC +
Preference number: 4 (lower is better)
Translates to: PGHHHFKALPSFLGRAQPSKPSS*PELLVI
Trigger: GATTACCAGCAGTTCTGGGCAGCTGGAAGGTTTGGA...TGGTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CTGTGCAGGAAACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCTGCATCCCACCTTCCTaGATCCAAACCTTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LCRKPGHHHFKALPSFLGCIPPS*IQTFQL
Trigger: CAGCTGGAAGGTTTGGATGCAGGAAGGTGGGATGCA...GCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp GAAAACCCCTCCTTGTGTGGAACAGGTCTTTCTTCATTCCATTCCTCTGGGCCTCGCAATGCATGCGAGTaGGGAGTGAGCAGGGGATGG +
Preference number: 4 (lower is better)
Translates to: ENPSLCGTGLSSFHSSGPRNACE*GVSRGW
Trigger: CCATCCCCTGCTCACTCCGCACTCGCATGCATTGCG...AGGCCCAGAGGAATGGAATGAAGAAAGACCTGTTCCACACAAGGAGGGGTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp ACACACTGCACACACTGGGCGGCTGTACCTGCCTATCCTGTGGTAAACTTGGCTGCCAGAAACCACAGCTaGAATGCTGACCTGGAATGC +
Preference number: 4 (lower is better)
Translates to: THCTHWAAVPAYPVVNLAARNHS*NADLEC
Trigger: GCATTCCAGGTCAGCATTGCAGCTGTGGTTTCTGGC...AGCCAAGTTTACCACAGGATAGGCAGGTACAGCCGCCCAGTGTGTGCAGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp TCAAGGATGACAGCAGACCCCTCCCTTCTGCCGCAGTTACACTTACAGGTGGACCCAGCTCACTTGCTTTaGTACCAGGGCTATACCTGC +
Preference number: 4 (lower is better)
Translates to: SRMTADPSLLPQLHLQVDPAHLL*YQGYTC
Trigger: GCAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCTGG...GTCCACCTGTAAGTGTAACTGCGGCAGAAGGGAGGGGTCTGCTGTCATCCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp AACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCCAACCTCCAGTCCCTaGTCTAAACCCCCATGTAGT +
Preference number: 4 (lower is better)
Translates to: NLDITTSRPYLPFWAEPNPTSSP*SKPPCS
Trigger: ACTACATGGGGGTTTAGAGCAGGGACTGGAGGTTGG...GTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp AGGGGCTCTGCTCATCACAGGCTATCAAGGATGACAGCAGACCCCTCCCTTCTGACGGTGGCCCACAGGTaGAAGCAAGAAATAAGCAGT +
Preference number: 4 (lower is better)
Translates to: RGSAHHRLSRMTADPSLLTVAHR*KQEISS
Trigger: ACTGCTTATTTCTTGCTTGCACCTGTGGGCCACCGT...CAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCAACGGTGGCCCACAGGTaGAAGCAAGAAATAAGCAGT +
Preference number: 4 (lower is better)
Translates to: PGHHHFKALPSFLGRAQPTVAHR*KQEISS
Trigger: ACTGCTTATTTCTTGCTTGCACCTGTGGGCCACCGT...TGGTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCGGGCCTGGGGGACTCTaGACACAGGCATGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFGPGGL*TQACGD
Trigger: GTCTCCACATGCCTGTGTGCAGAGTCCCCCAGGCCC...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp GAAAACCCCTCCTTGTGTGGAACAGGTCTTTCTTCATTCCATTCCTCTGGGCCTTGGGTGGTGGGGGTGTaGACAGATGTGGCTTGCACG +
Preference number: 4 (lower is better)
Translates to: ENPSLCGTGLSSFHSSGPWVVGV*TDVACT
Trigger: CGTGCAAGCCACATCTGTCCACACCCCCACCACCCA...AGGCCCAGAGGAATGGAATGAAGAAAGACCTGTTCCACACAAGGAGGGGTTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CATACAGGAACGAGGTCCCAACAGGGCAGACGTGGCAGACCCAGTTCAGTCCCAGTCCATCTGCTGCCATaGATGTGCGTTGGCATAATT +
Preference number: 4 (lower is better)
Translates to: HTGTRSQQGRRGRPSSVPVHLLP*MCVGII
Trigger: AATTATGCCAACGCACATCCATGGCAGCAGATGGAC...TGGGACTGAACTGGGTCTGCCACGTCTGCCCTGTTGGGACCTCGTTCCTGTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCCAGAAGTCCACCCTGTaGGGTCGGGAGCTGGGCATG +
Preference number: 4 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFQKSTL*GRELGM
Trigger: CATGCCCAGCTCCCGACCCCACAGGGTGGACTTCTG...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AAGACTGAAAATGGGTTTCTTCTGCCAGCTCACTTGCTTTGCTACCAGGGCTATGGGGGCTGCCTCCTCTaGCTGGGAAGAGGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: KTENGFLLPAHLLCYQGYGGCLL*LGRGWF
Trigger: GAACCAGCCTCTTCCCAGCCAGAGGAGGCAGCCCCC...ATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTTCAGTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCGGGGCCTCACAGCTCTaGACTGCTGCCTGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFGASQL*TAAWSS
Trigger: TGAGGACCAGGCAGCAGTCCAGAGCTGTGAGGCCCC...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCAAGTGGGGCCTCACAGCTCTaGACTGCTGCCTGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: RGHRCGQNYVPSIFLCSSGASQL*TAAWSS
Trigger: TGAGGACCAGGCAGCAGTCCAGAGCTGTGAGGCCCC...ACTTGAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCAAGTCCTGGCACAGAAGCATaGGGCTGGGCCAGGACATCC +
Preference number: 4 (lower is better)
Translates to: RGHRCGQNYVPSIFLCSSPGTEA*GWARTS
Trigger: GGATGTCCTGGCCCAGCCCCATGCTTCTGTGCCAGG...ACTTGAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp GAAAACCCCTCCTTGTGTGGAACAGGTCTTTCTTCATTCCATTCCTCTGGGCCTAGGGCAGCTGTGACCTaGCACAGAAGCATGGGGCTG +
Preference number: 4 (lower is better)
Translates to: ENPSLCGTGLSSFHSSGPRAAVT*HRSMGL
Trigger: CAGCCCCATGCTTCTGTGCCAGGTCACAGCTGCCCT...AGGCCCAGAGGAATGGAATGAAGAAAGACCTGTTCCACACAAGGAGGGGTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CAGTATGAGAAGGTCCACTTCTCCATACCTCCACAACTCTGGGCATCTAAAACTAGGCCCCAGCCACGGTaGCCCACAGGTGCAAGCAAG +
Preference number: 4 (lower is better)
Translates to: QYEKVHFSIPPQLWASKTRPQPR*PTGASK
Trigger: CTTGCTTGCACCTGTGGGCCACCGTGGCTGGGGCCT...AGTTTTAGATGCCCAGAGTTGTGGAGGTATGGAGAAGTGGACCTTCTCATACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTCTGCTGGAGTTGGGGGAGCTGGTTCTGCTCAGCGCAGAGTCCAAAACAAGCGCTTTGGCCACAGAAATaGAAGTGGGGTGACACACAT +
Preference number: 4 (lower is better)
Translates to: LCWSWGSWFCSAQSPKQALWPQK*KWGDTH
Trigger: ATGTGTGTCACCCCACTTCCATTTCTGTGGCCAAAG...CGCTTGTTTTGGACTCTGCGCTGAGCAGAACCAGCTCCCCCAACTCCAGCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AAGACTGAAAATGGGTTTCTTCTGCCAGCTCACTTGCTTTGCTACCAGGGCTATCCCCACTCCTCAGTATaGGCCCCAGAACCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: KTENGFLLPAHLLCYQGYPHSSV*APEPRA
Trigger: GGCCCTGGGTTCTGGGGCCCATACTGAGGAGTGGGG...ATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTTCAGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CAAAACGACCCCCTCGTGGGAGCAGGCCTGGGTGAGACGGCACTCCCAGAAGACCAGAAAGTTACAACCTaGGAATACAGGATAATGCCT +
Preference number: 4 (lower is better)
Translates to: QNDPLVGAGLGETALPEDQKVTT*EYRIMP
Trigger: AGGCATTATCCTGTATTCCCAGGTTGTAACTTTCTG...GTCTTCTGGGAGTGCCGTCTCACCCAGGCCTGCTCCCACGAGGGGGTCGTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp AGCTCACTTGCTTTGCTACCAGGGCTATACCTGCTTTCTAAAAATAGCTTCCCACAGGACAGGGATGGCTaGACAGGGCGTGGCAGACCC +
Preference number: 4 (lower is better)
Translates to: SSLALLPGLYLLSKNSFPQDRDG*TGRGRP
Trigger: GGGTCTGCCACGCCCTGTTCAGCCATCCCTGTCCTG...TGGGAAGCTATTTTTAGAAAGCAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CCTAGGTGGATGCTGCATGACTGGCCCTCAGACACACGGCAGACCATAACTCACCTTGAACAACTTCCTTaGGATCCTGGCAGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: PRWMLHDWPSDTRQTITHLEQLP*DPGRRA
Trigger: AGCTCTTCTGCCAGGATCTCAAGGAAGTTGTTCAAG...GTGAGTTATGGTCTGCCGTGTGTCTGAGGGCCAGTCATGCAGCATCCACCTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp TGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGAAAACTGTTCGGGTCTTaGACAACTTCCTTGAGATCC +
Preference number: 4 (lower is better)
Translates to: CLEGHARVHRCLHPTCAGKLFGS*TTSLRS
Trigger: GGATCTCAAGGAAGTTGTTCAAGACCCGAACAGTTT...TCCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CTGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGGATGCAACTATCTGCTaGGAGTTGATCTACAAAACG +
Preference number: 4 (lower is better)
Translates to: LSGRPCQSPSLPPPYLCRDATIC*ELIYKT
Trigger: CGTTTTGTAGATCAACTCTCAGCAGATAGTTGCATC...CCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CAGTATGAGAAGGTCCACTTCTCCATACCTCCACAACTCTGGGCATCTAAAACTCATGCGAGTGCGGAGTaGGCAGGGGATGGCAGCACA +
Preference number: 4 (lower is better)
Translates to: QYEKVHFSIPPQLWASKTHASAE*AGDGST
Trigger: TGTGCTGCCATCCCCTGCTCACTCCGCACTCGCATG...AGTTTTAGATGCCCAGAGTTGTGGAGGTATGGAGAAGTGGACCTTCTCATACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp GAAAACCCCTCCTTGTGTGGAACAGGTCTTTCTTCATTCCATTCCTCTGGGCCTCCACAGCTGCAATGCTaGCCTGGAATGCTCATGGCC +
Preference number: 4 (lower is better)
Translates to: ENPSLCGTGLSSFHSSGPPQLQC*PGMLMA
Trigger: GGCCATGAGCATTCCAGGTCAGCATTGCAGCTGTGG...AGGCCCAGAGGAATGGAATGAAGAAAGACCTGTTCCACACAAGGAGGGGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CATACAGGAACGAGGTCCCAACAGGGCAGACGTGGCAGACCCAGTTCAGTCCCACTCCCGGCCAGTTTCTaGATAAGTTTAATCAGATGC +
Preference number: 4 (lower is better)
Translates to: HTGTRSQQGRRGRPSSVPLPASF*ISLIRC
Trigger: GCATCTGATTAAACTTATTCAGAAACTGGCCGGGAG...TGGGACTGAACTGGGTCTGCCACGTCTGCCCTGTTGGGACCTCGTTCCTGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CTGTGCAGGAAACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCGAAGGACTGACACCATaGTTAGAAAGCAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LCRKPGHHHFKALPSFLGEGLTP*LESRAS
Trigger: GCTGGCTCTGCTTTCTAATCATGGTGTCAGTCCTTC...GCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp AGCTCACTTGCTTTGCTACCAGGGCTATACCTGCTTTCTAAAAATAGCTTCCCATCGTCAGCACAGGTCTaGCAGGCCCCAGCCACGGTG +
Preference number: 4 (lower is better)
Translates to: SSLALLPGLYLLSKNSFPSSAQV*QAPATV
Trigger: CACCGTGGCTGGGGCCTGTCAGACCTGTGCTGACGA...TGGGAAGCTATTTTTAGAAAGCAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp TCAAGGATGACAGCAGACCCCTCCCTTCTGCCGCAGTTACACTTACAGGTGGACTCCTTGGTCAGCTGCTaGTCGAACAGAGCACTTCTA +
Preference number: 4 (lower is better)
Translates to: SRMTADPSLLPQLHLQVDSLVSC*SNRALL
Trigger: TAGAAGTGCTCTGTTCGAGCAGCAGCTGACCAAGGA...GTCCACCTGTAAGTGTAACTGCGGCAGAAGGGAGGGGTCTGCTGTCATCCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCAAAAACAAGCGCATCTTaGCCAGCTATGGGGTCTGAA +
Preference number: 4 (lower is better)
Translates to: PGHHHFKALPSFLGRAQPKTSAS*PAMGSE
Trigger: TTCAGACCCCATAGCTGGGCAAGATGCGCTTGTTTT...TGGTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCAAGTGAAGACGGGCAGGGATaGAGCAGAGAGCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: RGHRCGQNYVPSIFLCSSEDGQG*SREPAA
Trigger: TGCTGCTGGCTCTCTGCTGCATCCCTGCCCGTCTTC...ACTTGAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CCTAGGTGGATGCTGCATGACTGGCCCTCAGACACACGGCAGACCATAACTCACCATTCTTTGCCAAGATaGTATCCCACTCATCCCCCA +
Preference number: 4 (lower is better)
Translates to: PRWMLHDWPSDTRQTITHHSLPR*YPTHPP
Trigger: TGGGGGATGAGTGGGATAGCATCTTGGCAAAGAATG...GTGAGTTATGGTCTGCCGTGTGTCTGAGGGCCAGTCATGCAGCATCCACCTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CTGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGGGAAACATCATTCTTTaGCAAGATGCTATCCCACTC +
Preference number: 4 (lower is better)
Translates to: LSGRPCQSPSLPPPYLCRGNIIL*QDAIPL
Trigger: GAGTGGGATAGCATCTTGGCAAAGAATGATGTTTCC...CCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCAAGTCGCAATGCATGCGAGTaGGGAGTGAGCAGGGGATGG +
Preference number: 4 (lower is better)
Translates to: RGHRCGQNYVPSIFLCSSRNACE*GVSRGW
Trigger: CCATCCCCTGCTCACTCCGCACTCGCATGCATTGCG...ACTTGAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp GAAAACCCCTCCTTGTGTGGAACAGGTCTTTCTTCATTCCATTCCTCTGGGCCTAGGAGCTGTGTGCACTaGCTGTCTGGAAGGCCATGC +
Preference number: 4 (lower is better)
Translates to: ENPSLCGTGLSSFHSSGPRSCVH*LSGRPC
Trigger: GCATGGCCTTCCAGACAGGCAGTGCACACAGCTCCT...AGGCCCAGAGGAATGGAATGAAGAAAGACCTGTTCCACACAAGGAGGGGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp TGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGAGTCACAGCATGCATGTaGCTAGAATTGTTACGTGGT +
Preference number: 4 (lower is better)
Translates to: CLEGHARVHRCLHPTCAGVTACM*LELLRG
Trigger: ACCACGTAACAATTCTAGGCACATGCATGCTGTGAC...TCCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp GGCAAGGGGCTTGCATCCCACCTTCCTGCATCCAAACCTTCCAGCTGCCCAGAAGTCACAGCATGCATGTaGCTAGAATTGTTACGTGGT +
Preference number: 4 (lower is better)
Translates to: GKGLASHLPASKPSSCPEVTACM*LELLRG
Trigger: ACCACGTAACAATTCTAGGCACATGCATGCTGTGAC...TTCTGGGCAGCTGGAAGGTTTGGATGCAGGAAGGTGGGATGCAAGCCCCTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CATACAGGAACGAGGTCCCAACAGGGCAGACGTGGCAGACCCAGTTCAGTCCCAGCCTTGCTCCTTTATTaGTGGATCTTTGGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: HTGTRSQQGRRGRPSSVPALLLY*WIFGLF
Trigger: GAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGC...TGGGACTGAACTGGGTCTGCCACGTCTGCCCTGTTGGGACCTCGTTCCTGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CATACAGGAACGAGGTCCCAACAGGGCAGACGTGGCAGACCCAGTTCAGTCCCAGGAGATCTTTGTTACTaGAGCACAATCTGGCTCATG +
Preference number: 4 (lower is better)
Translates to: HTGTRSQQGRRGRPSSVPGDLCY*STIWLM
Trigger: CATGAGCCAGATTGTGCTGCAGTAACAAAGATCTCC...TGGGACTGAACTGGGTCTGCCACGTCTGCCCTGTTGGGACCTCGTTCCTGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CAGTATGAGAAGGTCCACTTCTCCATACCTCCACAACTCTGGGCATCTAAAACTGGCCACGAGGCATGCTaGGAGCACAGGGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: QYEKVHFSIPPQLWASKTGHEAC*EHRGEE
Trigger: CTCTTCTCCCCTGTGCTCCCAGCATGCCTCGTGGCC...AGTTTTAGATGCCCAGAGTTGTGGAGGTATGGAGAAGTGGACCTTCTCATACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCAGTCCATCTGCTGCCATaGATGTGCGTTGGCATAATT +
Preference number: 4 (lower is better)
Translates to: PGHHHFKALPSFLGRAQPVHLLP*MCVGII
Trigger: AATTATGCCAACGCACATCCATGGCAGCAGATGGAC...TGGTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp GGCAAGGGGCTTGCATCCCACCTTCCTGCATCCAAACCTTCCAGCTGCCCAGAACAGGTAACCACAGCATaGTACTCAGCAAAACTGTTC +
Preference number: 4 (lower is better)
Translates to: GKGLASHLPASKPSSCPEQVTTA*YSAKLF
Trigger: GAACAGTTTTGCTGAGTACCATGCTGTGGTTACCTG...TTCTGGGCAGCTGGAAGGTTTGGATGCAGGAAGGTGGGATGCAAGCCCCTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTTTATTTGCCTTGCTCCTTTATTGCTGGATCTTTGGGCTTTTCCAGTTCTGCTCAGCTGAGGGGCCACTaGCAGCTGGCTGGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: LYLPCSFIAGSLGFSSSAQLRGH*QLAGGQ
Trigger: CTGGCCTCCAGCCAGCTGCCAGTGGCCCCTCAGCTG...AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCAAATAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp GAAAACCCCTCCTTGTGTGGAACAGGTCTTTCTTCATTCCATTCCTCTGGGCCTCAGGGGTGCTCTCCTTaGTCAGCTGCTGCTCGAACA +
Preference number: 4 (lower is better)
Translates to: ENPSLCGTGLSSFHSSGPQGCSP*SAAART
Trigger: TGTTCGAGCAGCAGCTGACCAAGGAGAGCACCCCTG...AGGCCCAGAGGAATGGAATGAAGAAAGACCTGTTCCACACAAGGAGGGGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACTCCTCCTCTGTTTTCTaGGGTTTTGGACCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: NLDITTSRPYLPFWAEPNSSSVF*GFGPPG
Trigger: TCCAGGAGGTCCAAAACCCCAGAAAACAGAGGAGGA...GTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp GAAAACCCCTCCTTGTGTGGAACAGGTCTTTCTTCATTCCATTCCTCTGGGCCTGAACCCAGGAGAAAGTaGTGGCTCTCCTGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: ENPSLCGTGLSSFHSSGPEPRRK*WLSWGL
Trigger: GAGACCCCAGGAGAGCCACCACTTTCTCCTGGGTTC...AGGCCCAGAGGAATGGAATGAAGAAAGACCTGTTCCACACAAGGAGGGGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp GAAAACCCCTCCTTGTGTGGAACAGGTCTTTCTTCATTCCATTCCTCTGGGCCTCCCCCAGAATCAAAGTaGCCACTTCCTCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: ENPSLCGTGLSSFHSSGPPPESK*PLPPGS
Trigger: GCTGCCTGGAGGAAGTGGCCACTTTGATTCTGGGGG...AGGCCCAGAGGAATGGAATGAAGAAAGACCTGTTCCACACAAGGAGGGGTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCGGGAGATGGGGAAGGTaGCCTGTCCAGAAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFGRWGR*PVQKPV
Trigger: CACAGGCTTCTGGACAGGCCACCTTCCCCATCTCCC...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp ACACACTGCACACACTGGGCGGCTGTACCTGCCTATCCTGTGGTAAACTTGGCTAAAAACCAGGTCACCTaGACTCTCCCAAGGACTCTC +
Preference number: 4 (lower is better)
Translates to: THCTHWAAVPAYPVVNLAKNQVT*TLPRTL
Trigger: GAGAGTCCTTGGGAGAGTCCAGGTGACCTGGTTTTT...AGCCAAGTTTACCACAGGATAGGCAGGTACAGCCGCCCAGTGTGTGCAGTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CAGTATGAGAAGGTCCACTTCTCCATACCTCCACAACTCTGGGCATCTAAAACTGCAGAGCCAGCACCATaGCCCGTCCCTGAGCATGTC +
Preference number: 4 (lower is better)
Translates to: QYEKVHFSIPPQLWASKTAEPAP*PVPEHV
Trigger: GACATGCTCAGGGACGGGCCATGGTGCTGGCTCTGC...AGTTTTAGATGCCCAGAGTTGTGGAGGTATGGAGAAGTGGACCTTCTCATACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AAGACTGAAAATGGGTTTCTTCTGCCAGCTCACTTGCTTTGCTACCAGGGCTATGCAGAGCCAGCACCATaGCCCGTCCCTGAGCATGTC +
Preference number: 4 (lower is better)
Translates to: KTENGFLLPAHLLCYQGYAEPAP*PVPEHV
Trigger: GACATGCTCAGGGACGGGCCATGGTGCTGGCTCTGC...ATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTTCAGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CATACAGGAACGAGGTCCCAACAGGGCAGACGTGGCAGACCCAGTTCAGTCCCACCACAGAAATGGAAGTaGGGTGACACACATTACTTG +
Preference number: 4 (lower is better)
Translates to: HTGTRSQQGRRGRPSSVPPQKWK*GDTHYL
Trigger: CAAGTAATGTGTGTCACCCCACTTCCATTTCTGTGG...TGGGACTGAACTGGGTCTGCCACGTCTGCCCTGTTGGGACCTCGTTCCTGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCACTTTGGCCACAGAAATaGAAGTGGGGTGACACACAT +
Preference number: 4 (lower is better)
Translates to: PGHHHFKALPSFLGRAQPLWPQK*KWGDTH
Trigger: ATGTGTGTCACCCCACTTCCATTTCTGTGGCCAAAG...TGGTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CCTAGGTGGATGCTGCATGACTGGCCCTCAGACACACGGCAGACCATAACTCACCTTTGGCCACAGAAATaGAAGTGGGGTGACACACAT +
Preference number: 4 (lower is better)
Translates to: PRWMLHDWPSDTRQTITHLWPQK*KWGDTH
Trigger: ATGTGTGTCACCCCACTTCCATTTCTGTGGCCAAAG...GTGAGTTATGGTCTGCCGTGTGTCTGAGGGCCAGTCATGCAGCATCCACCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp GAAAACCCCTCCTTGTGTGGAACAGGTCTTTCTTCATTCCATTCCTCTGGGCCTTATGTTGCCCTGGGATaGATGCAGGCCCCTCCCATC +
Preference number: 4 (lower is better)
Translates to: ENPSLCGTGLSSFHSSGPYVALG*MQAPPI
Trigger: GATGGGAGGGGCCTGCATCCATCCCAGGGCAACATA...AGGCCCAGAGGAATGGAATGAAGAAAGACCTGTTCCACACAAGGAGGGGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCAAGTGCGCCACCTAGAAAGTaGAGAACGAGATCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: RGHRCGQNYVPSIFLCSSAPPRK*RTRSAA
Trigger: GGCGGCCGATCTCGTTCTCCACTTTCTAGGTGGCGC...ACTTGAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405640.1
CDS-3UTR TCA 90 bp CGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCAAGTGGCAGGAGGATTAGCTaGCTCCGACAGTCTAGGGAC +
Preference number: 4 (lower is better)
Translates to: RGHRCGQNYVPSIFLCSSGRRIS*LRQSRD
Trigger: GTCCCTAGACTGTCGGAGTCAGCTAATCCTCCTGCC...ACTTGAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp AAGACTGAAAATGGGTTTCTTCTGCCAGCTCACTTGCTTTGCTACCAGGGCTATTGGAGTGCAATGGCGTaGTCTCGGCTCACCACACCC +
Preference number: 4 (lower is better)
Translates to: KTENGFLLPAHLLCYQGYWSAMA*SRLTTP
Trigger: GGGTGTGGTGAGCCGAGATCACGCCATTGCACTCCA...ATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTTCAGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp GGCAAGGGGCTTGCATCCCACCTTCCTGCATCCAAACCTTCCAGCTGCCCAGAATACTGGCATAAAGAGTaGGGCACATACATGGCTTTA +
Preference number: 4 (lower is better)
Translates to: GKGLASHLPASKPSSCPEYWHKE*GTYMAL
Trigger: TAAAGCCATGTATGTGCCTCACTCTTTATGCCAGTA...TTCTGGGCAGCTGGAAGGTTTGGATGCAGGAAGGTGGGATGCAAGCCCCTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CAGTATGAGAAGGTCCACTTCTCCATACCTCCACAACTCTGGGCATCTAAAACTCAGGGAGCTGACAGCTaGAGCCTCAGGAGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: QYEKVHFSIPPQLWASKTQGADS*SLRRAE
Trigger: CTCAGCTCTCCTGAGGCTGCAGCTGTCAGCTCCCTG...AGTTTTAGATGCCCAGAGTTGTGGAGGTATGGAGAAGTGGACCTTCTCATACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp ACAGGTGGACTCAAGGTTGAATGTCAAAGGCAGAAAGTTACAACCTGGGAATACACCGGCCACGAGGCATaGTGGGAGCACAGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: TGGLKVECQRQKVTTWEYTGHEA*WEHRGE
Trigger: TTCTCCCCTGTGCTCCCAGCATGCCTCGTGGCCGGT...GTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp ACAGGTGGACTCAAGGTTGAATGTCAAAGGCAGAAAGTTACAACCTGGGAATACCCTTGGGCCCAGGGGTaGTCTCCTTGGTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: TGGLKVECQRQKVTTWEYPWAQG*SPWSAA
Trigger: AGCAGCTGACCAAGGAGAGCACCCCTGGGCCCAAGG...GTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCCTGGGGACACCACTCTaGTCTGACTGGGGACTATGG +
Preference number: 4 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFLGTPL*SDWGLW
Trigger: CCATAGTCCCCAGTCAGAGCAGAGTGGTGTCCCCAG...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp GAAAACCCCTCCTTGTGTGGAACAGGTCTTTCTTCATTCCATTCCTCTGGGCCTCTGAGGGTCACAGTCTaGCAGGAGGGAGATCCAAGT +
Preference number: 4 (lower is better)
Translates to: ENPSLCGTGLSSFHSSGPLRVTV*QEGDPS
Trigger: ACTTGGATCTCCCTCCTGGCAGACTGTGACCCTCAG...AGGCCCAGAGGAATGGAATGAAGAAAGACCTGTTCCACACAAGGAGGGGTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp GAAAACCCCTCCTTGTGTGGAACAGGTCTTTCTTCATTCCATTCCTCTGGGCCTTTGTCCAGGCTGGAGTaGAATGGCGTGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: ENPSLCGTGLSSFHSSGPLSRLE*NGVISA
Trigger: AGCCGAGATCACGCCATTGCACTCCAGCCTGGACAA...AGGCCCAGAGGAATGGAATGAAGAAAGACCTGTTCCACACAAGGAGGGGTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp ACACACTGCACACACTGGGCGGCTGTACCTGCCTATCCTGTGGTAAACTTGGCTTTCTGCCAGCTCACTTaGTTTGCTACCAGGGCTATA +
Preference number: 4 (lower is better)
Translates to: THCTHWAAVPAYPVVNLAFCQLT*FATRAI
Trigger: TATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAA...AGCCAAGTTTACCACAGGATAGGCAGGTACAGCCGCCCAGTGTGTGCAGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CATACAGGAACGAGGTCCCAACAGGGCAGACGTGGCAGACCCAGTTCAGTCCCAAAAATGGGTTTCTTCTaGCAGCTCACTTGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: HTGTRSQQGRRGRPSSVPKMGFF*QLTCFA
Trigger: AGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTT...TGGGACTGAACTGGGTCTGCCACGTCTGCCCTGTTGGGACCTCGTTCCTGTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CTGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGCAAGTAGTCACAGCATaGATGTGCCTAGAATTGTTA +
Preference number: 4 (lower is better)
Translates to: LSGRPCQSPSLPPPYLCRQVVTA*MCLELL
Trigger: TAACAATTCTAGGCACATGCATGCTGTGACTACTTG...CCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp AGCTCACTTGCTTTGCTACCAGGGCTATACCTGCTTTCTAAAAATAGCTTCCCAGGGCCTGGGGGACTCTaGACACAGGCATGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: SSLALLPGLYLLSKNSFPGPGGL*TQACGD
Trigger: GTCTCCACATGCCTGTGTGCAGAGTCCCCCAGGCCC...TGGGAAGCTATTTTTAGAAAGCAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp GAAAACCCCTCCTTGTGTGGAACAGGTCTTTCTTCATTCCATTCCTCTGGGCCTGGGTGTGGACAGATGTaGCTTGCACGACACAACAGG +
Preference number: 4 (lower is better)
Translates to: ENPSLCGTGLSSFHSSGPGCGQM*LARHNR
Trigger: CCTGTTGTGTCGTGCAAGCCACATCTGTCCACACCC...AGGCCCAGAGGAATGGAATGAAGAAAGACCTGTTCCACACAAGGAGGGGTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp GAAAACCCCTCCTTGTGTGGAACAGGTCTTTCTTCATTCCATTCCTCTGGGCCTTGGATGAGCTGGGTCTaGTCTCTGGGCAGGAGGATT +
Preference number: 4 (lower is better)
Translates to: ENPSLCGTGLSSFHSSGPWMSWV*SLGRRI
Trigger: AATCCTCCTGCCCAGAGACCAGACCCAGCTCATCCA...AGGCCCAGAGGAATGGAATGAAGAAAGACCTGTTCCACACAAGGAGGGGTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp GAAAACCCCTCCTTGTGTGGAACAGGTCTTTCTTCATTCCATTCCTCTGGGCCTGGGTTTTGGACCTCCTaGATGAGCTGGGTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: ENPSLCGTGLSSFHSSGPGFWTS*MSWVWS
Trigger: AGACCAGACCCAGCTCATCCAGGAGGTCCAAAACCC...AGGCCCAGAGGAATGGAATGAAGAAAGACCTGTTCCACACAAGGAGGGGTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCAAGTCCACTCTGCTCTGACTaGGGACTATGGGGCGCTCAA +
Preference number: 4 (lower is better)
Translates to: RGHRCGQNYVPSIFLCSSPLCSD*GLWGAQ
Trigger: TTGAGCGCCCCATAGTCCCCAGTCAGAGCAGAGTGG...ACTTGAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCAAGTCCCCCAGAATCAAAGTaGCCACTTCCTCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: RGHRCGQNYVPSIFLCSSPPESK*PLPPGS
Trigger: GCTGCCTGGAGGAAGTGGCCACTTTGATTCTGGGGG...ACTTGAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CAGTATGAGAAGGTCCACTTCTCCATACCTCCACAACTCTGGGCATCTAAAACTACAGAAGCATGGGGCTaGGCCAGGACATCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: QYEKVHFSIPPQLWASKTTEAWG*ARTSRD
Trigger: GTCCCTGGATGTCCTGGCCCAGCCCCATGCTTCTGT...AGTTTTAGATGCCCAGAGTTGTGGAGGTATGGAGAAGTGGACCTTCTCATACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp ACAGGTGGACTCAAGGTTGAATGTCAAAGGCAGAAAGTTACAACCTGGGAATACCCTGGCACAGAAGCATaGGGCTGGGCCAGGACATCC +
Preference number: 4 (lower is better)
Translates to: TGGLKVECQRQKVTTWEYPGTEA*GWARTS
Trigger: GGATGTCCTGGCCCAGCCCCATGCTTCTGTGCCAGG...GTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CAAAACGACCCCCTCGTGGGAGCAGGCCTGGGTGAGACGGCACTCCCAGAAGACATTTCCATATTTATTTaGCCCGTTTCAAAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: QNDPLVGAGLGETALPEDISIFI*PVSKSS
Trigger: AGAGGACTTTGAAACGGGCCAAATAAATATGGAAAT...GTCTTCTGGGAGTGCCGTCTCACCCAGGCCTGCTCCCACGAGGGGGTCGTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGAGTGAGGCACATACATaGCTTTACTATTTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: LSGRPCQSPSLPPPYLCRSEAHT*LYYFPE
Trigger: CTCTGGAAAATAGTAAAGCCATGTATGTGCCTCACT...CCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp TGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGACATGAGGAAAAACTCTaGTCACAGCTCAAAAAGGTC +
Preference number: 4 (lower is better)
Translates to: CLEGHARVHRCLHPTCAGHEEKL*SQLKKV
Trigger: GACCTTTTTGAGCTGTGACCAGAGTTTTTCCTCATG...TCCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCACCACAGAAATGGAAGTaGGGTGACACACATTACTTG +
Preference number: 4 (lower is better)
Translates to: PGHHHFKALPSFLGRAQPPQKWK*GDTHYL
Trigger: CAAGTAATGTGTGTCACCCCACTTCCATTTCTGTGG...TGGTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCCAACCAGCCCCACGCTaGGTGGCTGCTTGTACTTCT +
Preference number: 4 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFQPAPR*VAACTS
Trigger: AGAAGTACAAGCAGCCACCCAGCGTGGGGCTGGTTG...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp AACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACAAACTGTTCGGGTCTTaGACAACTTCCTTGAGATCC +
Preference number: 4 (lower is better)
Translates to: NLDITTSRPYLPFWAEPNKLFGS*TTSLRS
Trigger: GGATCTCAAGGAAGTTGTTCAAGACCCGAACAGTTT...GTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCAAGTCAGGCCACTTCATCATaGGGGGCAGCATTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: RGHRCGQNYVPSIFLCSSQATSS*GAALFP
Trigger: TGGGAACAATGCTGCCCCTCATGATGAAGTGGCCTG...ACTTGAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp AAGACTGAAAATGGGTTTCTTCTGCCAGCTCACTTGCTTTGCTACCAGGGCTATACCAGGCCACAGAGCTaGCTAAGACAGAGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: KTENGFLLPAHLLCYQGYTRPQS*LRQSPC
Trigger: ACAGGGGCTCTGTCTTAGTCAGCTCTGTGGCCTGGT...ATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTTCAGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp TCAAGGATGACAGCAGACCCCTCCCTTCTGCCGCAGTTACACTTACAGGTGGACCTCCCGGCCAGTTTCTaGATAAGTTTAATCAGATGC +
Preference number: 4 (lower is better)
Translates to: SRMTADPSLLPQLHLQVDLPASF*ISLIRC
Trigger: GCATCTGATTAAACTTATTCAGAAACTGGCCGGGAG...GTCCACCTGTAAGTGTAACTGCGGCAGAAGGGAGGGGTCTGCTGTCATCCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp AGCTCACTTGCTTTGCTACCAGGGCTATACCTGCTTTCTAAAAATAGCTTCCCAAGTGGTACCGAACCATaGCCACCCCTGGCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: SSLALLPGLYLLSKNSFPSGTEP*PPLARA
Trigger: GGCTCTTGCCAGGGGTGGTCATGGTTCGGTACCACT...TGGGAAGCTATTTTTAGAAAGCAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCAAGACTAGTGAGCTTATaGGAGATTAGGACACAGACA +
Preference number: 4 (lower is better)
Translates to: PGHHHFKALPSFLGRAQPRLVSL*EIRTQT
Trigger: TGTCTGTGTCCTAATCTCTCATAAGCTCACTAGTCT...TGGTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp TCAAGGATGACAGCAGACCCCTCCCTTCTGCCGCAGTTACACTTACAGGTGGACAGGTGGACTCAAGGTTaGATGTCAAAGGCAGAAAGT +
Preference number: 4 (lower is better)
Translates to: SRMTADPSLLPQLHLQVDRWTQG*MSKAES
Trigger: ACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCT...GTCCACCTGTAAGTGTAACTGCGGCAGAAGGGAGGGGTCTGCTGTCATCCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCAAGTCTGCTGCCATGGATGTaGGTTGGCATAATTGGCGGC +
Preference number: 4 (lower is better)
Translates to: RGHRCGQNYVPSIFLCSSLLPWM*VGIIGG
Trigger: GCCGCCAATTATGCCAACGCACATCCATGGCAGCAG...ACTTGAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCAAGTGCCTTGTCCATCTGCTaGCATGGATGTGCGTTGGCA +
Preference number: 4 (lower is better)
Translates to: RGHRCGQNYVPSIFLCSSALSIC*HGCALA
Trigger: TGCCAACGCACATCCATGGCAGCAGATGGACAAGGC...ACTTGAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCGACGCCTTGTCCATCTaGTGCCATGGATGTGCGTTG +
Preference number: 4 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFDALSI*CHGCAL
Trigger: CAACGCACATCCATGGCAGCAGATGGACAAGGCGTC...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CCATATTTATTTGGCCCGTTTCAAAGTCCTCTATTCTCTGCTCATCTGTCCACAGACAGGTGTGGGGGCTaGCTCCTCTGGCTGGGAAGA +
Preference number: 4 (lower is better)
Translates to: PYLFGPFQSPLFSAHLSTDRCGG*LLWLGR
Trigger: TCTTCCCAGCCAGAGGAGGCAGCCCCCACACCTGTC...TGTGGACAGATGAGCAGAGAATAGAGGACTTTGAAACGGGCCAAATAAATATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp AGCTCACTTGCTTTGCTACCAGGGCTATACCTGCTTTCTAAAAATAGCTTCCCAGAAGACGGGCAGGGATaGAGCAGAGAGCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SSLALLPGLYLLSKNSFPEDGQG*SREPAA
Trigger: TGCTGCTGGCTCTCTGCTGCATCCCTGCCCGTCTTC...TGGGAAGCTATTTTTAGAAAGCAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp GAAAACCCCTCCTTGTGTGGAACAGGTCTTTCTTCATTCCATTCCTCTGGGCCTCTGGGCGGCTGTACCTaGCTATCCTGTGGTAAACTT +
Preference number: 4 (lower is better)
Translates to: ENPSLCGTGLSSFHSSGPLGGCT*LSCGKL
Trigger: AAGTTTACCACAGGATAGGCAGGTACAGCCGCCCAG...AGGCCCAGAGGAATGGAATGAAGAAAGACCTGTTCCACACAAGGAGGGGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp ACACACTGCACACACTGGGCGGCTGTACCTGCCTATCCTGTGGTAAACTTGGCTGTCACAGCATGCATGTaGCTAGAATTGTTACGTGGT +
Preference number: 4 (lower is better)
Translates to: THCTHWAAVPAYPVVNLAVTACM*LELLRG
Trigger: ACCACGTAACAATTCTAGGCACATGCATGCTGTGAC...AGCCAAGTTTACCACAGGATAGGCAGGTACAGCCGCCCAGTGTGTGCAGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp GGCAAGGGGCTTGCATCCCACCTTCCTGCATCCAAACCTTCCAGCTGCCCAGAACAAGTAGTCACAGCATaGATGTGCCTAGAATTGTTA +
Preference number: 4 (lower is better)
Translates to: GKGLASHLPASKPSSCPEQVVTA*MCLELL
Trigger: TAACAATTCTAGGCACATGCATGCTGTGACTACTTG...TTCTGGGCAGCTGGAAGGTTTGGATGCAGGAAGGTGGGATGCAAGCCCCTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp GAAAACCCCTCCTTGTGTGGAACAGGTCTTTCTTCATTCCATTCCTCTGGGCCTCCAACCTCCAGTCCCTaGTCTAAACCCCCATGTAGT +
Preference number: 4 (lower is better)
Translates to: ENPSLCGTGLSSFHSSGPPTSSP*SKPPCS
Trigger: ACTACATGGGGGTTTAGAGCAGGGACTGGAGGTTGG...AGGCCCAGAGGAATGGAATGAAGAAAGACCTGTTCCACACAAGGAGGGGTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp GGCAAGGGGCTTGCATCCCACCTTCCTGCATCCAAACCTTCCAGCTGCCCAGAAGGTAACAGCTTTATTTaGCTTGCTCCTTTATTGCTG +
Preference number: 4 (lower is better)
Translates to: GKGLASHLPASKPSSCPEGNSFI*LAPLLL
Trigger: CAGCAATAAAGGAGCAAGGCAAATAAAGCTGTTACC...TTCTGGGCAGCTGGAAGGTTTGGATGCAGGAAGGTGGGATGCAAGCCCCTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CTCTGCTGGAGTTGGGGGAGCTGGTTCTGCTCAGCGCAGAGTCCAAAACAAGCGGGTAACAGCTTTATTTaGCTTGCTCCTTTATTGCTG +
Preference number: 4 (lower is better)
Translates to: LCWSWGSWFCSAQSPKQAGNSFI*LAPLLL
Trigger: CAGCAATAAAGGAGCAAGGCAAATAAAGCTGTTACC...CGCTTGTTTTGGACTCTGCGCTGAGCAGAACCAGCTCCCCCAACTCCAGCAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CTGTGCAGGAAACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCGGAGATCTTTGTTACTaGAGCACAATCTGGCTCATG +
Preference number: 4 (lower is better)
Translates to: LCRKPGHHHFKALPSFLGGDLCY*STIWLM
Trigger: CATGAGCCAGATTGTGCTGCAGTAACAAAGATCTCC...GCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCCCCACGCTGGGTGGCTaGTTGTACTTCTCCATACTG +
Preference number: 4 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFPTLGG*LYFSIL
Trigger: CAGTATGGAGAAGTACAAGCAGCCACCCAGCGTGGG...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AAGACTGAAAATGGGTTTCTTCTGCCAGCTCACTTGCTTTGCTACCAGGGCTATACAACAGGACAGGGATaGCTGAACAGGGCGTGGCAG +
Preference number: 4 (lower is better)
Translates to: KTENGFLLPAHLLCYQGYTTGQG*LNRAWQ
Trigger: CTGCCACGCCCTGTTCAGCCATCCCTGTCCTGTTGT...ATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTTCAGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AGCTCACTTGCTTTGCTACCAGGGCTATACCTGCTTTCTAAAAATAGCTTCCCATGGGTGGTGGGGGTGTaGACAGATGTGGCTTGCACG +
Preference number: 4 (lower is better)
Translates to: SSLALLPGLYLLSKNSFPWVVGV*TDVACT
Trigger: CGTGCAAGCCACATCTGTCCACACCCCCACCACCCA...TGGGAAGCTATTTTTAGAAAGCAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AAGACTGAAAATGGGTTTCTTCTGCCAGCTCACTTGCTTTGCTACCAGGGCTATGCCATGGATGTGCGTTaGCATAATTGGCGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: KTENGFLLPAHLLCYQGYAMDVR*HNWRLP
Trigger: GGGCAGCCGCCAATTATGCCAACGCACATCCATGGC...ATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTTCAGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCTGCTCTTCTGCTCCATaGTCGTTCGCACACACACGG +
Preference number: 4 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFCSSAP*SFAHTR
Trigger: CCGTGTGTGTGCGAACGACCATGGAGCAGAAGAGCA...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CCATATTTATTTGGCCCGTTTCAAAGTCCTCTATTCTCTGCTCATCTGTCCACACAGAAGTCCACCCTGTaGGGTCGGGAGCTGGGCATG +
Preference number: 4 (lower is better)
Translates to: PYLFGPFQSPLFSAHLSTQKSTL*GRELGM
Trigger: CATGCCCAGCTCCCGACCCCACAGGGTGGACTTCTG...TGTGGACAGATGAGCAGAGAATAGAGGACTTTGAAACGGGCCAAATAAATATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp ACACACTGCACACACTGGGCGGCTGTACCTGCCTATCCTGTGGTAAACTTGGCTCAGGTAACCACAGCATaGTACTCAGCAAAACTGTTC +
Preference number: 4 (lower is better)
Translates to: THCTHWAAVPAYPVVNLAQVTTA*YSAKLF
Trigger: GAACAGTTTTGCTGAGTACCATGCTGTGGTTACCTG...AGCCAAGTTTACCACAGGATAGGCAGGTACAGCCGCCCAGTGTGTGCAGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AAGACTGAAAATGGGTTTCTTCTGCCAGCTCACTTGCTTTGCTACCAGGGCTATGCTGGGTCTGGTCTCTaGGCAGGAGGATTAGCTGAC +
Preference number: 4 (lower is better)
Translates to: KTENGFLLPAHLLCYQGYAGSGL*AGGLAD
Trigger: GTCAGCTAATCCTCCTGCCCAGAGACCAGACCCAGC...ATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTTCAGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CAGTATGAGAAGGTCCACTTCTCCATACCTCCACAACTCTGGGCATCTAAAACTGCTGGGTCTGGTCTCTaGGCAGGAGGATTAGCTGAC +
Preference number: 4 (lower is better)
Translates to: QYEKVHFSIPPQLWASKTAGSGL*AGGLAD
Trigger: GTCAGCTAATCCTCCTGCCCAGAGACCAGACCCAGC...AGTTTTAGATGCCCAGAGTTGTGGAGGTATGGAGAAGTGGACCTTCTCATACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CCTAGGTGGATGCTGCATGACTGGCCCTCAGACACACGGCAGACCATAACTCACAAACCCCTCCTTGTGTaGAACAGGTCTTTCTTCATT +
Preference number: 4 (lower is better)
Translates to: PRWMLHDWPSDTRQTITHKPLLV*NRSFFI
Trigger: AATGAAGAAAGACCTGTTCCACACAAGGAGGGGTTT...GTGAGTTATGGTCTGCCGTGTGTCTGAGGGCCAGTCATGCAGCATCCACCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AGGGGCTCTGCTCATCACAGGCTATCAAGGATGACAGCAGACCCCTCCCTTCTGAAACCCCTCCTTGTGTaGAACAGGTCTTTCTTCATT +
Preference number: 4 (lower is better)
Translates to: RGSAHHRLSRMTADPSLLKPLLV*NRSFFI
Trigger: AATGAAGAAAGACCTGTTCCACACAAGGAGGGGTTT...CAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp ACAGGTGGACTCAAGGTTGAATGTCAAAGGCAGAAAGTTACAACCTGGGAATACAGGGCAGCTGTGACCTaGCACAGAAGCATGGGGCTG +
Preference number: 4 (lower is better)
Translates to: TGGLKVECQRQKVTTWEYRAAVT*HRSMGL
Trigger: CAGCCCCATGCTTCTGTGCCAGGTCACAGCTGCCCT...GTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CCATATTTATTTGGCCCGTTTCAAAGTCCTCTATTCTCTGCTCATCTGTCCACACCCCCAGGAGCTGCCTaGGTCCCAAGGGCACAAAAG +
Preference number: 4 (lower is better)
Translates to: PYLFGPFQSPLFSAHLSTPPGAA*VPRAQK
Trigger: CTTTTGTGCCCTTGGGACCCAGGCAGCTCCTGGGGG...TGTGGACAGATGAGCAGAGAATAGAGGACTTTGAAACGGGCCAAATAAATATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AAGACTGAAAATGGGTTTCTTCTGCCAGCTCACTTGCTTTGCTACCAGGGCTATTCAAGCCTGCCTAGGTaGATGCTGCATGACTGGCCC +
Preference number: 4 (lower is better)
Translates to: KTENGFLLPAHLLCYQGYSSLPR*MLHDWP
Trigger: GGGCCAGTCATGCAGCATCCACCTAGGCAGGCTTGA...ATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTTCAGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CAA 72 bp AATGTCTGTTGTTTAAGTCCCCTAGCCTGCGGTCCTTaGTCAGGCAGCCCCAGCAGACAAACAGGTATGTTG +
Preference number: 4 (lower is better)
Translates to: NVCCLSPLACGP*SGSPSRQTGML
Trigger: CAACATACCTGTTTGTCTGCTGGGGCTGCCTGACAAAGGACCGCAGGCTAGGGGACTTAAACAACAGACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp AACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACGATGCAACTATCTGCTaGGAGTTGATCTACAAAACG +
Preference number: 4 (lower is better)
Translates to: NLDITTSRPYLPFWAEPNDATIC*ELIYKT
Trigger: CGTTTTGTAGATCAACTCTCAGCAGATAGTTGCATC...GTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp AGCTCACTTGCTTTGCTACCAGGGCTATACCTGCTTTCTAAAAATAGCTTCCCACCCACCCAGCTTCTTTaGTCAGACCCTTGGACCCTC +
Preference number: 4 (lower is better)
Translates to: SSLALLPGLYLLSKNSFPPTQLL*SDPWTL
Trigger: GAGGGTCCAAGGGTCTGATCAAAGAAGCTGGGTGGG...TGGGAAGCTATTTTTAGAAAGCAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp GAAAACCCCTCCTTGTGTGGAACAGGTCTTTCTTCATTCCATTCCTCTGGGCCTGAAGGACTGACACCATaGTTAGAAAGCAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: ENPSLCGTGLSSFHSSGPEGLTP*LESRAS
Trigger: GCTGGCTCTGCTTTCTAATCATGGTGTCAGTCCTTC...AGGCCCAGAGGAATGGAATGAAGAAAGACCTGTTCCACACAAGGAGGGGTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CTCTGCTGGAGTTGGGGGAGCTGGTTCTGCTCAGCGCAGAGTCCAAAACAAGCGGCCAACTGCTTTTACTaGATAATCCATTTTACTCGT +
Preference number: 4 (lower is better)
Translates to: LCWSWGSWFCSAQSPKQAANCFY*IIHFTR
Trigger: ACGAGTAAAATGGATTATTCAGTAAAAGCAGTTGGC...CGCTTGTTTTGGACTCTGCGCTGAGCAGAACCAGCTCCCCCAACTCCAGCAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCCAATCTGGCTCATGCTaGCTGATCCTGCAGGGTAAC +
Preference number: 4 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFQSGSC*LILQGN
Trigger: GTTACCCTGCAGGATCAGTCAGCATGAGCCAGATTG...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCACTAGCTCCAGAATCATaGGGAAATGTCTGTTGTTTA +
Preference number: 4 (lower is better)
Translates to: PGHHHFKALPSFLGRAQPLAPES*GNVCCL
Trigger: TAAACAACAGACATTTCCTCATGATTCTGGAGCTAG...TGGTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CCTAGGTGGATGCTGCATGACTGGCCCTCAGACACACGGCAGACCATAACTCACCTAGCTCCAGAATCATaGGGAAATGTCTGTTGTTTA +
Preference number: 4 (lower is better)
Translates to: PRWMLHDWPSDTRQTITHLAPES*GNVCCL
Trigger: TAAACAACAGACATTTCCTCATGATTCTGGAGCTAG...GTGAGTTATGGTCTGCCGTGTGTCTGAGGGCCAGTCATGCAGCATCCACCTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CCATATTTATTTGGCCCGTTTCAAAGTCCTCTATTCTCTGCTCATCTGTCCACACAGGGAGCTGACAGCTaGAGCCTCAGGAGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: PYLFGPFQSPLFSAHLSTQGADS*SLRRAE
Trigger: CTCAGCTCTCCTGAGGCTGCAGCTGTCAGCTCCCTG...TGTGGACAGATGAGCAGAGAATAGAGGACTTTGAAACGGGCCAAATAAATATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp AAGACTGAAAATGGGTTTCTTCTGCCAGCTCACTTGCTTTGCTACCAGGGCTATCTGAGGGTCACAGTCTaGCAGGAGGGAGATCCAAGT +
Preference number: 4 (lower is better)
Translates to: KTENGFLLPAHLLCYQGYLRVTV*QEGDPS
Trigger: ACTTGGATCTCCCTCCTGGCAGACTGTGACCCTCAG...ATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTTCAGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp AAGACTGAAAATGGGTTTCTTCTGCCAGCTCACTTGCTTTGCTACCAGGGCTATCTGGTAGGCAGCCACTaGACCACCTCAGCCAGTAAT +
Preference number: 4 (lower is better)
Translates to: KTENGFLLPAHLLCYQGYLVGSH*TTSASN
Trigger: ATTACTGGCTGAGGTGGTGCAGTGGCTGCCTACCAG...ATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTTCAGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp AAGACTGAAAATGGGTTTCTTCTGCCAGCTCACTTGCTTTGCTACCAGGGCTATAGTCAGTTCTCTACCTaGAGAGCCACCCACCCCCTA +
Preference number: 4 (lower is better)
Translates to: KTENGFLLPAHLLCYQGYSQFST*RATHPL
Trigger: TAGGGGGTGGGTGGCTCTGCAGGTAGAGAACTGACT...ATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTTCAGTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp AAGACTGAAAATGGGTTTCTTCTGCCAGCTCACTTGCTTTGCTACCAGGGCTATGCTCACCACACCCTCTaGCTCCTGGGTTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: KTENGFLLPAHLLCYQGYAHHTL*LLGSSN
Trigger: ATTGCTTGAACCCAGGAGGCAGAGGGTGTGGTGAGC...ATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTTCAGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCCCAGCTCACTTGCTTTaGTACCAGGGCTATACCTGC +
Preference number: 4 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFPAHLL*YQGYTC
Trigger: GCAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCTGG...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp ACACACTGCACACACTGGGCGGCTGTACCTGCCTATCCTGTGGTAAACTTGGCTAAAATGGGTTTCTTCTaGCAGCTCACTTGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: THCTHWAAVPAYPVVNLAKMGFF*QLTCFA
Trigger: AGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTT...AGCCAAGTTTACCACAGGATAGGCAGGTACAGCCGCCCAGTGTGTGCAGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp AGCTCACTTGCTTTGCTACCAGGGCTATACCTGCTTTCTAAAAATAGCTTCCCAAGGAGCTGTGTGCACTaGCTGTCTGGAAGGCCATGC +
Preference number: 4 (lower is better)
Translates to: SSLALLPGLYLLSKNSFPRSCVH*LSGRPC
Trigger: GCATGGCCTTCCAGACAGGCAGTGCACACAGCTCCT...TGGGAAGCTATTTTTAGAAAGCAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCAAGTCCAACCTCCAGTCCCTaGTCTAAACCCCCATGTAGT +
Preference number: 4 (lower is better)
Translates to: RGHRCGQNYVPSIFLCSSPTSSP*SKPPCS
Trigger: ACTACATGGGGGTTTAGAGCAGGGACTGGAGGTTGG...ACTTGAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp AAGACTGAAAATGGGTTTCTTCTGCCAGCTCACTTGCTTTGCTACCAGGGCTATAAGAAGATGGCTATCTaGAGGCCAAGGAGCGAGGCC +
Preference number: 4 (lower is better)
Translates to: KTENGFLLPAHLLCYQGYKKMAI*RPRSEA
Trigger: GGCCTCGCTCCTTGGCCTGCAGATAGCCATCTTCTT...ATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTTCAGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CAGTATGAGAAGGTCCACTTCTCCATACCTCCACAACTCTGGGCATCTAAAACTAGCACAACTGGGCACTaGCTACTCAACAGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: QYEKVHFSIPPQLWASKTSTTGH*LLNSQG
Trigger: GCCTTGGCTGTTGAGTAGGCAGTGCCCAGTTGTGCT...AGTTTTAGATGCCCAGAGTTGTGGAGGTATGGAGAAGTGGACCTTCTCATACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp ACAGGTGGACTCAAGGTTGAATGTCAAAGGCAGAAAGTTACAACCTGGGAATACACAACAGGACAGGGATaGCTGAACAGGGCGTGGCAG +
Preference number: 4 (lower is better)
Translates to: TGGLKVECQRQKVTTWEYTTGQG*LNRAWQ
Trigger: CTGCCACGCCCTGTTCAGCCATCCCTGTCCTGTTGT...GTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AAGACTGAAAATGGGTTTCTTCTGCCAGCTCACTTGCTTTGCTACCAGGGCTATGGGTGTGGACAGATGTaGCTTGCACGACACAACAGG +
Preference number: 4 (lower is better)
Translates to: KTENGFLLPAHLLCYQGYGCGQM*LARHNR
Trigger: CCTGTTGTGTCGTGCAAGCCACATCTGTCCACACCC...ATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTTCAGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp ACAGGTGGACTCAAGGTTGAATGTCAAAGGCAGAAAGTTACAACCTGGGAATACGCCATGGATGTGCGTTaGCATAATTGGCGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: TGGLKVECQRQKVTTWEYAMDVR*HNWRLP
Trigger: GGGCAGCCGCCAATTATGCCAACGCACATCCATGGC...GTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AGCTCACTTGCTTTGCTACCAGGGCTATACCTGCTTTCTAAAAATAGCTTCCCAGCCATGGATGTGCGTTaGCATAATTGGCGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SSLALLPGLYLLSKNSFPAMDVR*HNWRLP
Trigger: GGGCAGCCGCCAATTATGCCAACGCACATCCATGGC...TGGGAAGCTATTTTTAGAAAGCAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AGCTCACTTGCTTTGCTACCAGGGCTATACCTGCTTTCTAAAAATAGCTTCCCACGGCTGGTAAAGACCTaGGGGCAGTACCCATGTCGA +
Preference number: 4 (lower is better)
Translates to: SSLALLPGLYLLSKNSFPRLVKT*GQYPCR
Trigger: TCGACATGGGTACTGCCCCCAGGTCTTTACCAGCCG...TGGGAAGCTATTTTTAGAAAGCAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp ACAGGTGGACTCAAGGTTGAATGTCAAAGGCAGAAAGTTACAACCTGGGAATACCAGGGGTGCTCTCCTTaGTCAGCTGCTGCTCGAACA +
Preference number: 4 (lower is better)
Translates to: TGGLKVECQRQKVTTWEYQGCSP*SAAART
Trigger: TGTTCGAGCAGCAGCTGACCAAGGAGAGCACCCCTG...GTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTTTATTTGCCTTGCTCCTTTATTGCTGGATCTTTGGGCTTTTCCAGTTCTGCTGCTGCCTCCTCTGGCTaGGAAGAGGCTGGTTCCACA +
Preference number: 4 (lower is better)
Translates to: LYLPCSFIAGSLGFSSSAAASSG*EEAGST
Trigger: TGTGGAACCAGCCTCTTCCCAGCCAGAGGAGGCAGC...AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCAAATAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AGCTCACTTGCTTTGCTACCAGGGCTATACCTGCTTTCTAAAAATAGCTTCCCAGAACCCAGGAGAAAGTaGTGGCTCTCCTGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: SSLALLPGLYLLSKNSFPEPRRK*WLSWGL
Trigger: GAGACCCCAGGAGAGCCACCACTTTCTCCTGGGTTC...TGGGAAGCTATTTTTAGAAAGCAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AGCTCACTTGCTTTGCTACCAGGGCTATACCTGCTTTCTAAAAATAGCTTCCCATGGAGTTGGGGGAGCTaGTTCTGCTCAGCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: SSLALLPGLYLLSKNSFPWSWGS*FCSAQS
Trigger: ACTCTGCGCTGAGCAGAACCAGCTCCCCCAACTCCA...TGGGAAGCTATTTTTAGAAAGCAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AAGACTGAAAATGGGTTTCTTCTGCCAGCTCACTTGCTTTGCTACCAGGGCTATTTCATTCCATTCCTCTaGGCCTGGGGCCTCACAGCT +
Preference number: 4 (lower is better)
Translates to: KTENGFLLPAHLLCYQGYFIPFL*AWGLTA
Trigger: AGCTGTGAGGCCCCAGGCCCAGAGGAATGGAATGAA...ATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTTCAGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCAAGTGAGGCACATACATaGCTTTACTATTTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: PGHHHFKALPSFLGRAQPSEAHT*LYYFPE
Trigger: CTCTGGAAAATAGTAAAGCCATGTATGTGCCTCACT...TGGTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTGTGCAGGAAACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCCATGAGGAAAAACTCTaGTCACAGCTCAAAAAGGTC +
Preference number: 4 (lower is better)
Translates to: LCRKPGHHHFKALPSFLGHEEKL*SQLKKV
Trigger: GACCTTTTTGAGCTGTGACCAGAGTTTTTCCTCATG...GCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACTTGCTCCTTTATTGCTaGATCTTTGGGCTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: NLDITTSRPYLPFWAEPNLLLYC*IFGLFQ
Trigger: CTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAA...GTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AGCTCACTTGCTTTGCTACCAGGGCTATACCTGCTTTCTAAAAATAGCTTCCCAACAGGTATGTTGCCCTaGGATGGATGCAGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: SSLALLPGLYLLSKNSFPTGMLP*DGCRPL
Trigger: GAGGGGCCTGCATCCATCCCAGGGCAACATACCTGT...TGGGAAGCTATTTTTAGAAAGCAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CAA 72 bp CAGGCTTCTAGCTCCAGAATCATGAGGAAATGTCTGTaGTTTAAGTCCCCTAGCCTGCGGTCCTTTGTCAGG +
Preference number: 4 (lower is better)
Translates to: QASSSRIMRKCL*FKSPSLRSFVR
Trigger: CCTGACAAAGGACCGCAGGCTAGGGGACTTAAACAACAGACATTTCCTCATGATTCTGGAGCTAGAAGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CAGTATGAGAAGGTCCACTTCTCCATACCTCCACAACTCTGGGCATCTAAAACTTCTCGCAGACACGGCTaGTGTTGTCCTGATAGTGCT +
Preference number: 4 (lower is better)
Translates to: QYEKVHFSIPPQLWASKTSRRHG*CCPDSA
Trigger: AGCACTATCAGGACAACATCAGCCGTGTCTGCGAGA...AGTTTTAGATGCCCAGAGTTGTGGAGGTATGGAGAAGTGGACCTTCTCATACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp ACAGGTGGACTCAAGGTTGAATGTCAAAGGCAGAAAGTTACAACCTGGGAATACCAGGCCACTTCATCATaGGGGGCAGCATTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: TGGLKVECQRQKVTTWEYQATSS*GAALFP
Trigger: TGGGAACAATGCTGCCCCTCATGATGAAGTGGCCTG...GTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp GAAAACCCCTCCTTGTGTGGAACAGGTCTTTCTTCATTCCATTCCTCTGGGCCTCTATCTGCTGAGAGTTaGTCTACAAAACGACCCCCT +
Preference number: 4 (lower is better)
Translates to: ENPSLCGTGLSSFHSSGPLSAES*STKRPP
Trigger: AGGGGGTCGTTTTGTAGATCAACTCTCAGCAGATAG...AGGCCCAGAGGAATGGAATGAAGAAAGACCTGTTCCACACAAGGAGGGGTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CTTTATTTGCCTTGCTCCTTTATTGCTGGATCTTTGGGCTTTTCCAGTTCTGCTCATCAGGGAGCAGTCTaGCCCAACCCACAAAAGGGG +
Preference number: 4 (lower is better)
Translates to: LYLPCSFIAGSLGFSSSAHQGAV*PNPQKG
Trigger: CCCCTTTTGTGGGTTGGGTCAGACTGCTCCCTGATG...AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCAAATAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CCTAGGTGGATGCTGCATGACTGGCCCTCAGACACACGGCAGACCATAACTCACGCCAACTGCTTTTACTaGATAATCCATTTTACTCGT +
Preference number: 4 (lower is better)
Translates to: PRWMLHDWPSDTRQTITHANCFY*IIHFTR
Trigger: ACGAGTAAAATGGATTATTCAGTAAAAGCAGTTGGC...GTGAGTTATGGTCTGCCGTGTGTCTGAGGGCCAGTCATGCAGCATCCACCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp ACAGGTGGACTCAAGGTTGAATGTCAAAGGCAGAAAGTTACAACCTGGGAATACCATGAGGGTGGGCCCTaGTCCAATAGACTAGTGAGC +
Preference number: 4 (lower is better)
Translates to: TGGLKVECQRQKVTTWEYHEGGP*SNRLVS
Trigger: GCTCACTAGTCTATTGGATCAGGGCCCACCCTCATG...GTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CTTTATTTGCCTTGCTCCTTTATTGCTGGATCTTTGGGCTTTTCCAGTTCTGCTCTCCGAGTGCCCCTCTaGGGATCAGAAGTCGGGAAA +
Preference number: 4 (lower is better)
Translates to: LYLPCSFIAGSLGFSSSALRVPL*GSEVGK
Trigger: TTTCCCGACTTCTGATCCGCAGAGGGGCACTCGGAG...AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCAAATAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328554.9
ENST00000405640.1
CDS-3UTR GCA 90 bp AAGACTGAAAATGGGTTTCTTCTGCCAGCTCACTTGCTTTGCTACCAGGGCTATTGGACAGATGTGGCTTaGACGACACAACAGGACAGG +
Preference number: 4 (lower is better)
Translates to: KTENGFLLPAHLLCYQGYWTDVA*TTQQDR
Trigger: CCTGTCCTGTTGTGTCGTGCAAGCCACATCTGTCCA...ATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTTCAGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CTTTATTTGCCTTGCTCCTTTATTGCTGGATCTTTGGGCTTTTCCAGTTCTGCTGGCATAATTGGCGGCTaGCCAGATGGGAATGCGAGG +
Preference number: 4 (lower is better)
Translates to: LYLPCSFIAGSLGFSSSAGIIGG*PDGNAR
Trigger: CCTCGCATTCCCATCTGGGCAGCCGCCAATTATGCC...AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCAAATAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCTCCTTGGTCAGCTGCTaGTCGAACAGAGCACTTCTA +
Preference number: 4 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFSLVSC*SNRALL
Trigger: TAGAAGTGCTCTGTTCGAGCAGCAGCTGACCAAGGA...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCTCCAAACCTTCCAGCTaGCCAGAACTGCTGGTAATC +
Preference number: 4 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFSKPSS*PELLVI
Trigger: GATTACCAGCAGTTCTGGGCAGCTGGAAGGTTTGGA...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp AAGACTGAAAATGGGTTTCTTCTGCCAGCTCACTTGCTTTGCTACCAGGGCTATGCCAGAAACCACAGCTaGAATGCTGACCTGGAATGC +
Preference number: 4 (lower is better)
Translates to: KTENGFLLPAHLLCYQGYARNHS*NADLEC
Trigger: GCATTCCAGGTCAGCATTGCAGCTGTGGTTTCTGGC...ATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTTCAGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp AAGACTGAAAATGGGTTTCTTCTGCCAGCTCACTTGCTTTGCTACCAGGGCTATCTGGGCGGCTGTACCTaGCTATCCTGTGGTAAACTT +
Preference number: 4 (lower is better)
Translates to: KTENGFLLPAHLLCYQGYLGGCT*LSCGKL
Trigger: AAGTTTACCACAGGATAGGCAGGTACAGCCGCCCAG...ATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTTCAGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp AGCTCACTTGCTTTGCTACCAGGGCTATACCTGCTTTCTAAAAATAGCTTCCCATTGTCCAGGCTGGAGTaGAATGGCGTGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: SSLALLPGLYLLSKNSFPLSRLE*NGVISA
Trigger: AGCCGAGATCACGCCATTGCACTCCAGCCTGGACAA...TGGGAAGCTATTTTTAGAAAGCAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CAGTATGAGAAGGTCCACTTCTCCATACCTCCACAACTCTGGGCATCTAAAACTCCCCAGCCAAGGCACTaGATGGGCATCATTCTCATT +
Preference number: 4 (lower is better)
Translates to: QYEKVHFSIPPQLWASKTPQPRH*MGIILI
Trigger: AATGAGAATGATGCCCATGCAGTGCCTTGGCTGGGG...AGTTTTAGATGCCCAGAGTTGTGGAGGTATGGAGAAGTGGACCTTCTCATACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp TCAAGGATGACAGCAGACCCCTCCCTTCTGCCGCAGTTACACTTACAGGTGGACCAGCTTTATTTGCCTTaGTCCTTTATTGCTGGATCT +
Preference number: 4 (lower is better)
Translates to: SRMTADPSLLPQLHLQVDQLYLP*SFIAGS
Trigger: AGATCCAGCAATAAAGGAGCAAGGCAAATAAAGCTG...GTCCACCTGTAAGTGTAACTGCGGCAGAAGGGAGGGGTCTGCTGTCATCCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp AACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCAGCTTTATTTGCCTTaGTCCTTTATTGCTGGATCT +
Preference number: 4 (lower is better)
Translates to: NLDITTSRPYLPFWAEPNQLYLP*SFIAGS
Trigger: AGATCCAGCAATAAAGGAGCAAGGCAAATAAAGCTG...GTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CAGTATGAGAAGGTCCACTTCTCCATACCTCCACAACTCTGGGCATCTAAAACTAGGAGAAACCAACCCTaGCCACACCTTGATCTCAGG +
Preference number: 4 (lower is better)
Translates to: QYEKVHFSIPPQLWASKTRRNQP*PHLDLR
Trigger: CCTGAGATCAAGGTGTGGGCAGGGTTGGTTTCTCCT...AGTTTTAGATGCCCAGAGTTGTGGAGGTATGGAGAAGTGGACCTTCTCATACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp GAAAACCCCTCCTTGTGTGGAACAGGTCTTTCTTCATTCCATTCCTCTGGGCCTGTCCATCTGCTGCCATaGATGTGCGTTGGCATAATT +
Preference number: 4 (lower is better)
Translates to: ENPSLCGTGLSSFHSSGPVHLLP*MCVGII
Trigger: AATTATGCCAACGCACATCCATGGCAGCAGATGGAC...AGGCCCAGAGGAATGGAATGAAGAAAGACCTGTTCCACACAAGGAGGGGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CCATATTTATTTGGCCCGTTTCAAAGTCCTCTATTCTCTGCTCATCTGTCCACACGGCTGGTAAAGACCTaGGGGCAGTACCCATGTCGA +
Preference number: 4 (lower is better)
Translates to: PYLFGPFQSPLFSAHLSTRLVKT*GQYPCR
Trigger: TCGACATGGGTACTGCCCCCAGGTCTTTACCAGCCG...TGTGGACAGATGAGCAGAGAATAGAGGACTTTGAAACGGGCCAAATAAATATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTTTATTTGCCTTGCTCCTTTATTGCTGGATCTTTGGGCTTTTCCAGTTCTGCTTGGAGTTGGGGGAGCTaGTTCTGCTCAGCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: LYLPCSFIAGSLGFSSSAWSWGS*FCSAQS
Trigger: ACTCTGCGCTGAGCAGAACCAGCTCCCCCAACTCCA...AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCAAATAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CCATATTTATTTGGCCCGTTTCAAAGTCCTCTATTCTCTGCTCATCTGTCCACAGAGGTCAAGCTCTGCTaGAGTTGGGGGAGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: PYLFGPFQSPLFSAHLSTEVKLC*SWGSWF
Trigger: GAACCAGCTCCCCCAACTCCAGCAGAGCTTGACCTC...TGTGGACAGATGAGCAGAGAATAGAGGACTTTGAAACGGGCCAAATAAATATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTTTATTTGCCTTGCTCCTTTATTGCTGGATCTTTGGGCTTTTCCAGTTCTGCTGCTGCAATGCTGACCTaGAATGCTCATGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LYLPCSFIAGSLGFSSSAAAMLT*NAHGQA
Trigger: GGCCTGGCCATGAGCATTCCAGGTCAGCATTGCAGC...AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCAAATAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp TCAAGGATGACAGCAGACCCCTCCCTTCTGCCGCAGTTACACTTACAGGTGGACAGTGAGGCACATACATaGCTTTACTATTTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: SRMTADPSLLPQLHLQVDSEAHT*LYYFPE
Trigger: CTCTGGAAAATAGTAAAGCCATGTATGTGCCTCACT...GTCCACCTGTAAGTGTAACTGCGGCAGAAGGGAGGGGTCTGCTGTCATCCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp ACAGGTGGACTCAAGGTTGAATGTCAAAGGCAGAAAGTTACAACCTGGGAATACAACCATGACCACCCCTaGCAAGAGCCTTCATGCACC +
Preference number: 4 (lower is better)
Translates to: TGGLKVECQRQKVTTWEYNHDHP*QEPSCT
Trigger: GGTGCATGAAGGCTCTTGCCAGGGGTGGTCATGGTT...GTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTTTATTTGCCTTGCTCCTTTATTGCTGGATCTTTGGGCTTTTCCAGTTCTGCTACTTGTGGCCTGCTGTaGCCTTTCCCCTGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: LYLPCSFIAGSLGFSSSATCGLL*PFPCLS
Trigger: ACTGAGGCAGGGGAAAGGCCACAGCAGGCCACAAGT...AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCAAATAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTTTATTTGCCTTGCTCCTTTATTGCTGGATCTTTGGGCTTTTCCAGTTCTGCTACAGGTATGTTGCCCTaGGATGGATGCAGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: LYLPCSFIAGSLGFSSSATGMLP*DGCRPL
Trigger: GAGGGGCCTGCATCCATCCCAGGGCAACATACCTGT...AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCAAATAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CCATATTTATTTGGCCCGTTTCAAAGTCCTCTATTCTCTGCTCATCTGTCCACACTGCACACAGGCATGTaGAGACCACAGAAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: PYLFGPFQSPLFSAHLSTLHTGM*RPQKPA
Trigger: GGCAGGCTTCTGTGGTCTCCACATGCCTGTGTGCAG...TGTGGACAGATGAGCAGAGAATAGAGGACTTTGAAACGGGCCAAATAAATATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AAGACTGAAAATGGGTTTCTTCTGCCAGCTCACTTGCTTTGCTACCAGGGCTATCCCATACAGCACAACTaGGCACTGCCTACTCAACAG +
Preference number: 4 (lower is better)
Translates to: KTENGFLLPAHLLCYQGYPIQHN*ALPTQQ
Trigger: CTGTTGAGTAGGCAGTGCCCAGTTGTGCTGTATGGG...ATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTTCAGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp AGCTCACTTGCTTTGCTACCAGGGCTATACCTGCTTTCTAAAAATAGCTTCCCACCAGGCCTCTGCTCCTaGCAGAATGGGAAACAAAGA +
Preference number: 4 (lower is better)
Translates to: SSLALLPGLYLLSKNSFPPGLCS*QNGKQR
Trigger: TCTTTGTTTCCCATTCTGTCAGGAGCAGAGGCCTGG...TGGGAAGCTATTTTTAGAAAGCAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp AACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACAAGGTATCTGTGCCCTaGAATAACTCACACATAAAA +
Preference number: 4 (lower is better)
Translates to: NLDITTSRPYLPFWAEPNKVSVP*NNSHIK
Trigger: TTTTATGTGTGAGTTATTTCAGGGCACAGATACCTT...GTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CCATATTTATTTGGCCCGTTTCAAAGTCCTCTATTCTCTGCTCATCTGTCCACAGCCTTGTCCATCTGCTaGCATGGATGTGCGTTGGCA +
Preference number: 4 (lower is better)
Translates to: PYLFGPFQSPLFSAHLSTALSIC*HGCALA
Trigger: TGCCAACGCACATCCATGGCAGCAGATGGACAAGGC...TGTGGACAGATGAGCAGAGAATAGAGGACTTTGAAACGGGCCAAATAAATATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp AGCTCACTTGCTTTGCTACCAGGGCTATACCTGCTTTCTAAAAATAGCTTCCCAGCCAGAAACCACAGCTaGAATGCTGACCTGGAATGC +
Preference number: 4 (lower is better)
Translates to: SSLALLPGLYLLSKNSFPARNHS*NADLEC
Trigger: GCATTCCAGGTCAGCATTGCAGCTGTGGTTTCTGGC...TGGGAAGCTATTTTTAGAAAGCAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CTTTATTTGCCTTGCTCCTTTATTGCTGGATCTTTGGGCTTTTCCAGTTCTGCTGACCCTCAAAGCCCCTaGCAGAAACCACAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: LYLPCSFIAGSLGFSSSADPQSP*QKPQLQ
Trigger: TTGCAGCTGTGGTTTCTGGCAGGGGCTTTGAGGGTC...AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCAAATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCAAGTTTCTGCCAGCTCACTTaGTTTGCTACCAGGGCTATA +
Preference number: 4 (lower is better)
Translates to: RGHRCGQNYVPSIFLCSSFCQLT*FATRAI
Trigger: TATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAA...ACTTGAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp ACAGGTGGACTCAAGGTTGAATGTCAAAGGCAGAAAGTTACAACCTGGGAATACCTGTCTGAAAGCAGGTaGTGCAGCAGCTGGCAACAA +
Preference number: 4 (lower is better)
Translates to: TGGLKVECQRQKVTTWEYLSESR*CSSWQQ
Trigger: TTGTTGCCAGCTGCTGCAGCACCTGCTTTCAGACAG...GTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp AAGACTGAAAATGGGTTTCTTCTGCCAGCTCACTTGCTTTGCTACCAGGGCTATACGGTGGCCCACAGGTaGAAGCAAGAAATAAGCAGT +
Preference number: 4 (lower is better)
Translates to: KTENGFLLPAHLLCYQGYTVAHR*KQEISS
Trigger: ACTGCTTATTTCTTGCTTGCACCTGTGGGCCACCGT...ATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTTCAGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp ACAGGTGGACTCAAGGTTGAATGTCAAAGGCAGAAAGTTACAACCTGGGAATACAGGAGAAACCAACCCTaGCCACACCTTGATCTCAGG +
Preference number: 4 (lower is better)
Translates to: TGGLKVECQRQKVTTWEYRRNQP*PHLDLR
Trigger: CCTGAGATCAAGGTGTGGGCAGGGTTGGTTTCTCCT...GTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CCATATTTATTTGGCCCGTTTCAAAGTCCTCTATTCTCTGCTCATCTGTCCACAAAGAAGATGGCTATCTaGAGGCCAAGGAGCGAGGCC +
Preference number: 4 (lower is better)
Translates to: PYLFGPFQSPLFSAHLSTKKMAI*RPRSEA
Trigger: GGCCTCGCTCCTTGGCCTGCAGATAGCCATCTTCTT...TGTGGACAGATGAGCAGAGAATAGAGGACTTTGAAACGGGCCAAATAAATATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTTTATTTGCCTTGCTCCTTTATTGCTGGATCTTTGGGCTTTTCCAGTTCTGCTTGGATGAGCTGGGTCTaGTCTCTGGGCAGGAGGATT +
Preference number: 4 (lower is better)
Translates to: LYLPCSFIAGSLGFSSSAWMSWV*SLGRRI
Trigger: AATCCTCCTGCCCAGAGACCAGACCCAGCTCATCCA...AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCAAATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTTTATTTGCCTTGCTCCTTTATTGCTGGATCTTTGGGCTTTTCCAGTTCTGCTACACACTGCACACACTaGGCGGCTGTACCTGCCTAT +
Preference number: 4 (lower is better)
Translates to: LYLPCSFIAGSLGFSSSATHCTH*AAVPAY
Trigger: ATAGGCAGGTACAGCCGCCCAGTGTGTGCAGTGTGT...AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCAAATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CCATATTTATTTGGCCCGTTTCAAAGTCCTCTATTCTCTGCTCATCTGTCCACACTGTCCAGAAGCCTGTaGGACAGGGTAAAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: PYLFGPFQSPLFSAHLSTLSRSL*DRVKVS
Trigger: GCTGACCTTTACCCTGTCCCACAGGCTTCTGGACAG...TGTGGACAGATGAGCAGAGAATAGAGGACTTTGAAACGGGCCAAATAAATATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTTTATTTGCCTTGCTCCTTTATTGCTGGATCTTTGGGCTTTTCCAGTTCTGCTTCCACTAAAGGGAGATaGGGAAGGTGGCCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: LYLPCSFIAGSLGFSSSASTKGR*GRWPVQ
Trigger: CTGGACAGGCCACCTTCCCCATCTCCCTTTAGTGGA...AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCAAATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AGCTCACTTGCTTTGCTACCAGGGCTATACCTGCTTTCTAAAAATAGCTTCCCACCTGTGCAGGAAACCTaGACATCACCACTTCAAGGC +
Preference number: 4 (lower is better)
Translates to: SSLALLPGLYLLSKNSFPPVQET*TSPLQG
Trigger: GCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAGG...TGGGAAGCTATTTTTAGAAAGCAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CCATATTTATTTGGCCCGTTTCAAAGTCCTCTATTCTCTGCTCATCTGTCCACAGGGTCTGCCAGTGTGTaGGGGCCAGAAGAGAAAAAC +
Preference number: 4 (lower is better)
Translates to: PYLFGPFQSPLFSAHLSTGSASV*GPEEKN
Trigger: GTTTTTCTCTTCTGGCCCCCACACACTGGCAGACCC...TGTGGACAGATGAGCAGAGAATAGAGGACTTTGAAACGGGCCAAATAAATATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AGGGGCTCTGCTCATCACAGGCTATCAAGGATGACAGCAGACCCCTCCCTTCTGATTTCCATATTTATTTaGCCCGTTTCAAAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: RGSAHHRLSRMTADPSLLISIFI*PVSKSS
Trigger: AGAGGACTTTGAAACGGGCCAAATAAATATGGAAAT...CAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CCTAGGTGGATGCTGCATGACTGGCCCTCAGACACACGGCAGACCATAACTCACATACCTCCACAACTCTaGGCATCTAAAACTTTTAAA +
Preference number: 4 (lower is better)
Translates to: PRWMLHDWPSDTRQTITHIPPQL*ASKTFK
Trigger: TTTAAAAGTTTTAGATGCCCAGAGTTGTGGAGGTAT...GTGAGTTATGGTCTGCCGTGTGTCTGAGGGCCAGTCATGCAGCATCCACCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp ACAGGTGGACTCAAGGTTGAATGTCAAAGGCAGAAAGTTACAACCTGGGAATACGACACGGCAAGAAGATaGCTATCTGCAGGCCAAGGA +
Preference number: 4 (lower is better)
Translates to: TGGLKVECQRQKVTTWEYDTARR*LSAGQG
Trigger: TCCTTGGCCTGCAGATAGCCATCTTCTTGCCGTGTC...GTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CAGTATGAGAAGGTCCACTTCTCCATACCTCCACAACTCTGGGCATCTAAAACTCTTCTAACCACCCCATaGGGAAAAACTCTGGTCACA +
Preference number: 4 (lower is better)
Translates to: QYEKVHFSIPPQLWASKTLLTTP*GKTLVT
Trigger: TGTGACCAGAGTTTTTCCTCATGGGGTGGTTAGAAG...AGTTTTAGATGCCCAGAGTTGTGGAGGTATGGAGAAGTGGACCTTCTCATACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCAAGTAGGTGGACTCAAGGTTaGATGTCAAAGGCAGAAAGT +
Preference number: 4 (lower is better)
Translates to: RGHRCGQNYVPSIFLCSSRWTQG*MSKAES
Trigger: ACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCT...ACTTGAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CTTTATTTGCCTTGCTCCTTTATTGCTGGATCTTTGGGCTTTTCCAGTTCTGCTACAGGTGTGAGACACTaGTCCCGGCCAGTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: LYLPCSFIAGSLGFSSSATGVRH*SRPVSE
Trigger: TTCAGAAACTGGCCGGGAGCAGTGTCTCACACCTGT...AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCAAATAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CAGTATGAGAAGGTCCACTTCTCCATACCTCCACAACTCTGGGCATCTAAAACTTTCTGCCAGCTCACTTaGTTTGCTACCAGGGCTATA +
Preference number: 4 (lower is better)
Translates to: QYEKVHFSIPPQLWASKTFCQLT*FATRAI
Trigger: TATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAA...AGTTTTAGATGCCCAGAGTTGTGGAGGTATGGAGAAGTGGACCTTCTCATACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCGCCTTGCTCCTTTATTaGTGGATCTTTGGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFALLLY*WIFGLF
Trigger: GAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGC...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTTTATTTGCCTTGCTCCTTTATTGCTGGATCTTTGGGCTTTTCCAGTTCTGCTAGCATTGTTCCCACCTaGGCTGTGTTCAGAACCCAG +
Preference number: 4 (lower is better)
Translates to: LYLPCSFIAGSLGFSSSASIVPT*AVFRTQ
Trigger: CTGGGTTCTGAACACAGCCCAGGTGGGAACAATGCT...AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCAAATAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp GAAAACCCCTCCTTGTGTGGAACAGGTCTTTCTTCATTCCATTCCTCTGGGCCTTTATTGCTGGATCTTTaGGCTTTTCCAGTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: ENPSLCGTGLSSFHSSGPLLLDL*AFPVLL
Trigger: CAGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAA...AGGCCCAGAGGAATGGAATGAAGAAAGACCTGTTCCACACAAGGAGGGGTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTTTATTTGCCTTGCTCCTTTATTGCTGGATCTTTGGGCTTTTCCAGTTCTGCTTCAGGTGTGGCTCTGTaGCTTCCTTTGGCCACAGAA +
Preference number: 4 (lower is better)
Translates to: LYLPCSFIAGSLGFSSSASGVAL*LPLATE
Trigger: TTCTGTGGCCAAAGGAAGCCACAGAGCCACACCTGA...AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCAAATAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CCATATTTATTTGGCCCGTTTCAAAGTCCTCTATTCTCTGCTCATCTGTCCACAGACACGGCAAGAAGATaGCTATCTGCAGGCCAAGGA +
Preference number: 4 (lower is better)
Translates to: PYLFGPFQSPLFSAHLSTDTARR*LSAGQG
Trigger: TCCTTGGCCTGCAGATAGCCATCTTCTTGCCGTGTC...TGTGGACAGATGAGCAGAGAATAGAGGACTTTGAAACGGGCCAAATAAATATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CAA 72 bp AGCTTCCAAGCTCAGCTTCCACTAGAAAACCCCTCCTaGTGTGGAACAGGTCTTTCTTCATTCCATTCCTCT +
Preference number: 4 (lower is better)
Translates to: SFQAQLPLENPS*CGTGLSSFHSS
Trigger: AGAGGAATGGAATGAAGAAAGACCTGTTCCACACAAGGAGGGGTTTTCTAGTGGAAGCTGAGCTTGGAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp AGCTCACTTGCTTTGCTACCAGGGCTATACCTGCTTTCTAAAAATAGCTTCCCACTTGAACAACTTCCTTaGGATCCTGGCAGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: SSLALLPGLYLLSKNSFPLEQLP*DPGRRA
Trigger: AGCTCTTCTGCCAGGATCTCAAGGAAGTTGTTCAAG...TGGGAAGCTATTTTTAGAAAGCAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp AAGACTGAAAATGGGTTTCTTCTGCCAGCTCACTTGCTTTGCTACCAGGGCTATCTCCCGGCCAGTTTCTaGATAAGTTTAATCAGATGC +
Preference number: 4 (lower is better)
Translates to: KTENGFLLPAHLLCYQGYLPASF*ISLIRC
Trigger: GCATCTGATTAAACTTATTCAGAAACTGGCCGGGAG...ATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTTCAGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp GAAAACCCCTCCTTGTGTGGAACAGGTCTTTCTTCATTCCATTCCTCTGGGCCTCAGCTTTATTTGCCTTaGTCCTTTATTGCTGGATCT +
Preference number: 4 (lower is better)
Translates to: ENPSLCGTGLSSFHSSGPQLYLP*SFIAGS
Trigger: AGATCCAGCAATAAAGGAGCAAGGCAAATAAAGCTG...AGGCCCAGAGGAATGGAATGAAGAAAGACCTGTTCCACACAAGGAGGGGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCCATGAGGAAAAACTCTaGTCACAGCTCAAAAAGGTC +
Preference number: 4 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFHEEKL*SQLKKV
Trigger: GACCTTTTTGAGCTGTGACCAGAGTTTTTCCTCATG...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AGCTCACTTGCTTTGCTACCAGGGCTATACCTGCTTTCTAAAAATAGCTTCCCAAGCCAAGGCACTGCATaGGCATCATTCTCATTCAAC +
Preference number: 4 (lower is better)
Translates to: SSLALLPGLYLLSKNSFPSQGTA*ASFSFN
Trigger: GTTGAATGAGAATGATGCCCATGCAGTGCCTTGGCT...TGGGAAGCTATTTTTAGAAAGCAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CAA 72 bp TTTCACAATTGTAAACCTGAAAGGGACTTGAACTTCTaGTCCAAGCACCAGAGTGGGCACACACTGCACACA +
Preference number: 4 (lower is better)
Translates to: FHNCKPERDLNF*SKHQSGHTLHT
Trigger: TGTGTGCAGTGTGTGCCCACTCTGGTGCTTGGACAAGAAGTTCAAGTCCCTTTCAGGTTTACAATTGTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CTTTATTTGCCTTGCTCCTTTATTGCTGGATCTTTGGGCTTTTCCAGTTCTGCTCTATCTGCTGAGAGTTaGTCTACAAAACGACCCCCT +
Preference number: 4 (lower is better)
Translates to: LYLPCSFIAGSLGFSSSALSAES*STKRPP
Trigger: AGGGGGTCGTTTTGTAGATCAACTCTCAGCAGATAG...AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCAAATAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CTTTATTTGCCTTGCTCCTTTATTGCTGGATCTTTGGGCTTTTCCAGTTCTGCTCTTCTAACCACCCCATaGGGAAAAACTCTGGTCACA +
Preference number: 4 (lower is better)
Translates to: LYLPCSFIAGSLGFSSSALLTTP*GKTLVT
Trigger: TGTGACCAGAGTTTTTCCTCATGGGGTGGTTAGAAG...AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCAAATAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp AAGACTGAAAATGGGTTTCTTCTGCCAGCTCACTTGCTTTGCTACCAGGGCTATAGACTAGTGAGCTTATaGGAGATTAGGACACAGACA +
Preference number: 4 (lower is better)
Translates to: KTENGFLLPAHLLCYQGYRLVSL*EIRTQT
Trigger: TGTCTGTGTCCTAATCTCTCATAAGCTCACTAGTCT...ATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTTCAGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp AGCTCACTTGCTTTGCTACCAGGGCTATACCTGCTTTCTAAAAATAGCTTCCCAAGGTGGACTCAAGGTTaGATGTCAAAGGCAGAAAGT +
Preference number: 4 (lower is better)
Translates to: SSLALLPGLYLLSKNSFPRWTQG*MSKAES
Trigger: ACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCT...TGGGAAGCTATTTTTAGAAAGCAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp ACAGGTGGACTCAAGGTTGAATGTCAAAGGCAGAAAGTTACAACCTGGGAATACCAGGTAACCACAGCATaGTACTCAGCAAAACTGTTC +
Preference number: 4 (lower is better)
Translates to: TGGLKVECQRQKVTTWEYQVTTA*YSAKLF
Trigger: GAACAGTTTTGCTGAGTACCATGCTGTGGTTACCTG...GTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AAGACTGAAAATGGGTTTCTTCTGCCAGCTCACTTGCTTTGCTACCAGGGCTATAAACCCCTCCTTGTGTaGAACAGGTCTTTCTTCATT +
Preference number: 4 (lower is better)
Translates to: KTENGFLLPAHLLCYQGYKPLLV*NRSFFI
Trigger: AATGAAGAAAGACCTGTTCCACACAAGGAGGGGTTT...ATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTTCAGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTTTATTTGCCTTGCTCCTTTATTGCTGGATCTTTGGGCTTTTCCAGTTCTGCTAGCCAAGGCACTGCATaGGCATCATTCTCATTCAAC +
Preference number: 4 (lower is better)
Translates to: LYLPCSFIAGSLGFSSSASQGTA*ASFSFN
Trigger: GTTGAATGAGAATGATGCCCATGCAGTGCCTTGGCT...AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCAAATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CAGTATGAGAAGGTCCACTTCTCCATACCTCCACAACTCTGGGCATCTAAAACTTTATTGCTGGATCTTTaGGCTTTTCCAGTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: QYEKVHFSIPPQLWASKTLLLDL*AFPVLL
Trigger: CAGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAA...AGTTTTAGATGCCCAGAGTTGTGGAGGTATGGAGAAGTGGACCTTCTCATACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp AAGACTGAAAATGGGTTTCTTCTGCCAGCTCACTTGCTTTGCTACCAGGGCTATTTGCTCCTTTATTGCTaGATCTTTGGGCTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: KTENGFLLPAHLLCYQGYLLLYC*IFGLFQ
Trigger: CTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAA...ATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTTCAGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCGAAAGATTTCTTAAGTaGGAAACAGCATCCCATACA +
Preference number: 4 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFERFLK*ETASHT
Trigger: TGTATGGGATGCTGTTTCTCACTTAAGAAATCTTTC...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CCATATTTATTTGGCCCGTTTCAAAGTCCTCTATTCTCTGCTCATCTGTCCACAGCCTTGCTCCTTTATTaGTGGATCTTTGGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: PYLFGPFQSPLFSAHLSTALLLY*WIFGLF
Trigger: GAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGC...TGTGGACAGATGAGCAGAGAATAGAGGACTTTGAAACGGGCCAAATAAATATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp GAAAACCCCTCCTTGTGTGGAACAGGTCTTTCTTCATTCCATTCCTCTGGGCCTATTTCCATATTTATTTaGCCCGTTTCAAAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: ENPSLCGTGLSSFHSSGPISIFI*PVSKSS
Trigger: AGAGGACTTTGAAACGGGCCAAATAAATATGGAAAT...AGGCCCAGAGGAATGGAATGAAGAAAGACCTGTTCCACACAAGGAGGGGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp ACAGGTGGACTCAAGGTTGAATGTCAAAGGCAGAAAGTTACAACCTGGGAATACTTATTGCTGGATCTTTaGGCTTTTCCAGTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: TGGLKVECQRQKVTTWEYLLLDL*AFPVLL
Trigger: CAGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAA...GTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp ACAGGTGGACTCAAGGTTGAATGTCAAAGGCAGAAAGTTACAACCTGGGAATACTTGCTCCTTTATTGCTaGATCTTTGGGCTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: TGGLKVECQRQKVTTWEYLLLYC*IFGLFQ
Trigger: CTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAA...GTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CCATATTTATTTGGCCCGTTTCAAAGTCCTCTATTCTCTGCTCATCTGTCCACACCACAGAAATGGAAGTaGGGTGACACACATTACTTG +
Preference number: 4 (lower is better)
Translates to: PYLFGPFQSPLFSAHLSTPQKWK*GDTHYL
Trigger: CAAGTAATGTGTGTCACCCCACTTCCATTTCTGTGG...TGTGGACAGATGAGCAGAGAATAGAGGACTTTGAAACGGGCCAAATAAATATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CAGTATGAGAAGGTCCACTTCTCCATACCTCCACAACTCTGGGCATCTAAAACTCAGAAAGTTACAACCTaGGAATACAGGATAATGCCT +
Preference number: 4 (lower is better)
Translates to: QYEKVHFSIPPQLWASKTQKVTT*EYRIMP
Trigger: AGGCATTATCCTGTATTCCCAGGTTGTAACTTTCTG...AGTTTTAGATGCCCAGAGTTGTGGAGGTATGGAGAAGTGGACCTTCTCATACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp AAGACTGAAAATGGGTTTCTTCTGCCAGCTCACTTGCTTTGCTACCAGGGCTATAAGGTATCTGTGCCCTaGAATAACTCACACATAAAA +
Preference number: 4 (lower is better)
Translates to: KTENGFLLPAHLLCYQGYKVSVP*NNSHIK
Trigger: TTTTATGTGTGAGTTATTTCAGGGCACAGATACCTT...ATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTTCAGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CCATATTTATTTGGCCCGTTTCAAAGTCCTCTATTCTCTGCTCATCTGTCCACATACTGGCATAAAGAGTaGGGCACATACATGGCTTTA +
Preference number: 4 (lower is better)
Translates to: PYLFGPFQSPLFSAHLSTYWHKE*GTYMAL
Trigger: TAAAGCCATGTATGTGCCTCACTCTTTATGCCAGTA...TGTGGACAGATGAGCAGAGAATAGAGGACTTTGAAACGGGCCAAATAAATATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CCATATTTATTTGGCCCGTTTCAAAGTCCTCTATTCTCTGCTCATCTGTCCACAAGACTAGTGAGCTTATaGGAGATTAGGACACAGACA +
Preference number: 4 (lower is better)
Translates to: PYLFGPFQSPLFSAHLSTRLVSL*EIRTQT
Trigger: TGTCTGTGTCCTAATCTCTCATAAGCTCACTAGTCT...TGTGGACAGATGAGCAGAGAATAGAGGACTTTGAAACGGGCCAAATAAATATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp ACAGGTGGACTCAAGGTTGAATGTCAAAGGCAGAAAGTTACAACCTGGGAATACGGTAACAGCTTTATTTaGCTTGCTCCTTTATTGCTG +
Preference number: 4 (lower is better)
Translates to: TGGLKVECQRQKVTTWEYGNSFI*LAPLLL
Trigger: CAGCAATAAAGGAGCAAGGCAAATAAAGCTGTTACC...GTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp ACAGGTGGACTCAAGGTTGAATGTCAAAGGCAGAAAGTTACAACCTGGGAATACCAGAAAGTTACAACCTaGGAATACAGGATAATGCCT +
Preference number: 4 (lower is better)
Translates to: TGGLKVECQRQKVTTWEYQKVTT*EYRIMP
Trigger: AGGCATTATCCTGTATTCCCAGGTTGTAACTTTCTG...GTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
3UTR CAA 72 bp TTTTGTTGTTTTCACAATTGTAAACCTGAAAGGGACTaGAACTTCTTGTCCAAGCACCAGAGTGGGCACACA +
Preference number: 4 (lower is better)
Translates to: FCCFHNCKPERD*NFLSKHQSGHT
Trigger: TGTGTGCCCACTCTGGTGCTTGGACAAGAAGTTCAAGTCCCTTTCAGGTTTACAATTGTGAAAACAACAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp ACAGGTGGACTCAAGGTTGAATGTCAAAGGCAGAAAGTTACAACCTGGGAATACGAAAGATTTCTTAAGTaGGAAACAGCATCCCATACA +
Preference number: 4 (lower is better)
Translates to: TGGLKVECQRQKVTTWEYERFLK*ETASHT
Trigger: TGTATGGGATGCTGTTTCTCACTTAAGAAATCTTTC...GTATTCCCAGGTTGTAACTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp AGCTCACTTGCTTTGCTACCAGGGCTATACCTGCTTTCTAAAAATAGCTTCCCAGAAAGATTTCTTAAGTaGGAAACAGCATCCCATACA +
Preference number: 4 (lower is better)
Translates to: SSLALLPGLYLLSKNSFPERFLK*ETASHT
Trigger: TGTATGGGATGCTGTTTCTCACTTAAGAAATCTTTC...TGGGAAGCTATTTTTAGAAAGCAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR GCA 90 bp CCATATTTATTTGGCCCGTTTCAAAGTCCTCTATTCTCTGCTCATCTGTCCACACAAGTAGTCACAGCATaGATGTGCCTAGAATTGTTA +
Preference number: 4 (lower is better)
Translates to: PYLFGPFQSPLFSAHLSTQVVTA*MCLELL
Trigger: TAACAATTCTAGGCACATGCATGCTGTGACTACTTG...TGTGGACAGATGAGCAGAGAATAGAGGACTTTGAAACGGGCCAAATAAATATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CAGTATGAGAAGGTCCACTTCTCCATACCTCCACAACTCTGGGCATCTAAAACTATACCTCCACAACTCTaGGCATCTAAAACTTTTAAA +
Preference number: 4 (lower is better)
Translates to: QYEKVHFSIPPQLWASKTIPPQL*ASKTFK
Trigger: TTTAAAAGTTTTAGATGCCCAGAGTTGTGGAGGTAT...AGTTTTAGATGCCCAGAGTTGTGGAGGTATGGAGAAGTGGACCTTCTCATACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CTTTATTTGCCTTGCTCCTTTATTGCTGGATCTTTGGGCTTTTCCAGTTCTGCTAAGGTATCTGTGCCCTaGAATAACTCACACATAAAA +
Preference number: 4 (lower is better)
Translates to: LYLPCSFIAGSLGFSSSAKVSVP*NNSHIK
Trigger: TTTTATGTGTGAGTTATTTCAGGGCACAGATACCTT...AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCAAATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR TCA 90 bp CTTTATTTGCCTTGCTCCTTTATTGCTGGATCTTTGGGCTTTTCCAGTTCTGCTGCCAACTGCTTTTACTaGATAATCCATTTTACTCGT +
Preference number: 4 (lower is better)
Translates to: LYLPCSFIAGSLGFSSSAANCFY*IIHFTR
Trigger: ACGAGTAAAATGGATTATTCAGTAAAAGCAGTTGGC...AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCAAATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CCA 90 bp CTTTATTTGCCTTGCTCCTTTATTGCTGGATCTTTGGGCTTTTCCAGTTCTGCTATACCTCCACAACTCTaGGCATCTAAAACTTTTAAA +
Preference number: 4 (lower is better)
Translates to: LYLPCSFIAGSLGFSSSAIPPQL*ASKTFK
Trigger: TTTAAAAGTTTTAGATGCCCAGAGTTGTGGAGGTAT...AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCAAATAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS CCA 90 bp CGAATCGCCCGCGAAGAGGGTCCTGGGATCCGTAGCCACAGACCGTaGGACGGGCCTCCCTCTGAGGGCGAGAGTCCAGGCGCCACCGAG +
Preference number: 5 (lower is better)
Translates to: RIAREEGPGIRSHRP*DGPPSEGESPGATE
Trigger: CTCGGTGGCGCCTGGACTCTCGCCCTCAGAGGGAGGCCCGTCCCACGGTCTGTGGCTACGGATCCCAGGACCCTCTTCGCGGGCGATTCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328554.9
CDS CCA 90 bp CGAATCGCCCGCGAAGAGGGTCCTGGGATCCGTAGCCACAGACCGTaGGACGGGCCTCCCTCTGAGGGCGAGAGTCCAGGCGCCACCCTC +
Preference number: 5 (lower is better)
Translates to: RIAREEGPGIRSHRP*DGPPSEGESPGATL
Trigger: GAGGGTGGCGCCTGGACTCTCGCCCTCAGAGGGAGGCCCGTCCCACGGTCTGTGGCTACGGATCCCAGGACCCTCTTCGCGGGCGATTCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407472.5
ENST00000484072.5
CDS CCA 90 bp ACGGGCCTCCCTCTGAGGGCGAGAGTCCAGGCGCCACCTAGAAAGTaGAGAACGAGATCGGCCGCCGTGAGGCCAGGCAAGGAGCGGGCG +
Preference number: 5 (lower is better)
Translates to: TGLPLRARVQAPPRK*RTRSAAVRPGKERA
Trigger: CGCCCGCTCCTTGCCTGGCCTCACGGCGGCCGATCTCGTTCTCCACTTTCTAGGTGGCGCCTGGACTCTCGCCCTCAGAGGGAGGCCCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405640.1
CDS CCA 90 bp CGAATCGCCCGCGAAGAGGGTCCTGGGATCCGTAGCCACAGACCGTaGGACGGGCCTCCCTCTGAGGGCGAGAGTCCAGGCGCCACCGAA +
Preference number: 5 (lower is better)
Translates to: RIAREEGPGIRSHRP*DGPPSEGESPGATE
Trigger: TTCGGTGGCGCCTGGACTCTCGCCCTCAGAGGGAGGCCCGTCCCACGGTCTGTGGCTACGGATCCCAGGACCCTCTTCGCGGGCGATTCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416337.1
CDS GCA 90 bp AGTCCAGGCGCCACCGAGAAACTGAGGCCCGCAGACCGAAGGCACTaGGACCCAGGCTGGGGCTCCGAGTGCCCCTCTGCGGATCAGAAG +
Preference number: 5 (lower is better)
Translates to: SPGATEKLRPADRRH*DPGWGSECPSADQK
Trigger: CTTCTGATCCGCAGAGGGGCACTCGGAGCCCCAGCCTGGGTCGCAGTGCCTTCGGTCTGCGGGCCTCAGTTTCTCGGTGGCGCCTGGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328554.9
CDS GCA 90 bp GCCATGGATGTGCGTTGGCATAATTGGCGGCTGCCCAGATGGGAATaGGAGGGCCCTGCTGACGGCACCGGCCACGAGGCATGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: AMDVRWHNWRLPRWE*EGPADGTGHEACWE
Trigger: CTCCCAGCATGCCTCGTGGCCGGTGCCGTCAGCAGGGCCCTCGCATTCCCATCTGGGCAGCCGCCAATTATGCCAACGCACATCCATGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
ENST00000416337.1
CDS GCA 90 bp GCTGGGCCAAGAAGCGGTCCAGTAGCCACGGGGAGCCATCAAAGGTaGCTGGGTCTGAGCCTGGTACCCAGCAGAAGTCCACCCTGTGGG +
Preference number: 5 (lower is better)
Translates to: AGPRSGPVATGSHQR*LGLSLVPSRSPPCG
Trigger: CCCACAGGGTGGACTTCTGCTGGGTACCAGGCTCAGACCCAGGCACCTTTGATGGCTCCCCGTGGCTACTGGACCGCTTCTTGGCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS CCA 90 bp ACCGAGAAACTGAGGCCCGCAGACCGAAGGCACTGCGACCCAGGCTaGGGCTCCGAGTGCCCCTCTGCGGATCAGAAGTCGGGAAAAGAC +
Preference number: 5 (lower is better)
Translates to: TEKLRPADRRHCDPG*GSECPSADQKSGKD
Trigger: GTCTTTTCCCGACTTCTGATCCGCAGAGGGGCACTCGGAGCCCCAGCCTGGGTCGCAGTGCCTTCGGTCTGCGGGCCTCAGTTTCTCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328554.9
ENST00000405640.1
CDS CCA 90 bp TCTGCTGCCATGGATGTGCGTTGGCATAATTGGCGGCTGCCCAGATaGGAATGCGAGGGCCCTGCTGACGGCACCGGCCACGAGGCATGC +
Preference number: 5 (lower is better)
Translates to: SAAMDVRWHNWRLPR*ECEGPADGTGHEAC
Trigger: GCATGCCTCGTGGCCGGTGCCGTCAGCAGGGCCCTCGCATTCCCATCTGGGCAGCCGCCAATTATGCCAACGCACATCCATGGCAGCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
ENST00000416337.1
CDS-3UTR CAA 90 bp AGCAGGGAAAGGGCACAGGGCGGAGGTCAAGCTCTGCTGGAGTTGGGGGAGCTGTCCACACTGACCCTCTaGCCGGAGTCGGGAACGCCT +
Preference number: 5 (lower is better)
Translates to: SRERAQGGGQALLELGELSTLTL*PESGTP
Trigger: AGGCGTTCCCGACTCCGGCAAGAGGGTCAGTGTGGA...CAGCTCCCCCAACTCCAGCAGAGCTTGACCTCCGCCCTGTGCCCTTTCCCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328554.9
ENST00000405640.1
CDS-3UTR CAA 90 bp AGCAGGGAAAGGGCACAGGGCGGAGGTCAAGCTCTGCTGGAGTTGGGGGAGCTGCCAGGGGTGCTCTCCTaGGTCAGCTGCTGCTCGAAC +
Preference number: 5 (lower is better)
Translates to: SRERAQGGGQALLELGELPGVLS*VSCCSN
Trigger: GTTCGAGCAGCAGCTGACCAAGGAGAGCACCCCTGG...CAGCTCCCCCAACTCCAGCAGAGCTTGACCTCCGCCCTGTGCCCTTTCCCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS GCA 90 bp CTTGTCCATCTGCTGCCATGGATGTGCGTTGGCATAATTGGCGGCTaGCCAGATGGGAATGCGAGGGCCCTGCTGACGGCACCGGCCACG +
Preference number: 5 (lower is better)
Translates to: LVHLLPWMCVGIIGG*PDGNARALLTAPAT
Trigger: CGTGGCCGGTGCCGTCAGCAGGGCCCTCGCATTCCCATCTGGGCAGCCGCCAATTATGCCAACGCACATCCATGGCAGCAGATGGACAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
ENST00000416337.1
CDS CCA 90 bp GGGGGTGTGGACAGATGTGGCTTGCACGACACAACAGGACAGGGATaGCTGAACAGGGCGTGGCAGACCCGCACTGGTCCAGGCAAGTGC +
Preference number: 5 (lower is better)
Translates to: GGVDRCGLHDTTGQG*LNRAWQTRTGPGKC
Trigger: GCACTTGCCTGGACCAGTGCGGGTCTGCCACGCCCTGTTCAGCCATCCCTGTCCTGTTGTGTCGTGCAAGCCACATCTGTCCACACCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
ENST00000416337.1
CDS CCA 90 bp GCAGCATTGTTCCCACCTGGGCTGTGTTCAGAACCCAGGAGAAAGTaGTGGCTCTCCTGGGGTCTCCGGGGCCTCCACCACCTCCTGTGG +
Preference number: 5 (lower is better)
Translates to: AALFPPGLCSEPRRK*WLSWGLRGLHHLLW
Trigger: CCACAGGAGGTGGTGGAGGCCCCGGAGACCCCAGGAGAGCCACCACTTTCTCCTGGGTTCTGAACACAGCCCAGGTGGGAACAATGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp AGCAGGGAAAGGGCACAGGGCGGAGGTCAAGCTCTGCTGGAGTTGGGGGAGCTGTGCCAGAGTCCATCGTaGCCTCCACCCTACCTGTGC +
Preference number: 5 (lower is better)
Translates to: SRERAQGGGQALLELGELCQSPS*PPPYLC
Trigger: GCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCA...CAGCTCCCCCAACTCCAGCAGAGCTTGACCTCCGCCCTGTGCCCTTTCCCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS CCA 90 bp GAGACGCCTTGTCCATCTGCTGCCATGGATGTGCGTTGGCATAATTaGCGGCTGCCCAGATGGGAATGCGAGGGCCCTGCTGACGGCACC +
Preference number: 5 (lower is better)
Translates to: ETPCPSAAMDVRWHN*RLPRWECEGPADGT
Trigger: GGTGCCGTCAGCAGGGCCCTCGCATTCCCATCTGGGCAGCCGCCAATTATGCCAACGCACATCCATGGCAGCAGATGGACAAGGCGTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
ENST00000416337.1
CDS CCA 90 bp CCACCCCAGGAGACGCCTTGTCCATCTGCTGCCATGGATGTGCGTTaGCATAATTGGCGGCTGCCCAGATGGGAATGCGAGGGCCCTGCT +
Preference number: 5 (lower is better)
Translates to: PPQETPCPSAAMDVR*HNWRLPRWECEGPA
Trigger: AGCAGGGCCCTCGCATTCCCATCTGGGCAGCCGCCAATTATGCCAACGCACATCCATGGCAGCAGATGGACAAGGCGTCTCCTGGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
ENST00000416337.1
CDS-3UTR CAA 90 bp CAAAACGACCCCCTCGTGGGAGCAGGCCTGGGTGAGACGGCACTCCCAGAAGACCCCCACCCAGCTTCTTaGATCAGACCCTTGGACCCT +
Preference number: 5 (lower is better)
Translates to: QNDPLVGAGLGETALPEDPHPAS*IRPLDP
Trigger: AGGGTCCAAGGGTCTGATCAAAGAAGCTGGGTGGGG...GTCTTCTGGGAGTGCCGTCTCACCCAGGCCTGCTCCCACGAGGGGGTCGTTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS TCA 90 bp GTGTGGACAGATGTGGCTTGCACGACACAACAGGACAGGGATGGCTaGACAGGGCGTGGCAGACCCGCACTGGTCCAGGCAAGTGCTGAG +
Preference number: 5 (lower is better)
Translates to: VWTDVACTTQQDRDG*TGRGRPALVQASAE
Trigger: CTCAGCACTTGCCTGGACCAGTGCGGGTCTGCCACGCCCTGTTCAGCCATCCCTGTCCTGTTGTGTCGTGCAAGCCACATCTGTCCACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
ENST00000416337.1
CDS GCA 90 bp GTATGCCACCCCAGGAGACGCCTTGTCCATCTGCTGCCATGGATGTaGGTTGGCATAATTGGCGGCTGCCCAGATGGGAATGCGAGGGCC +
Preference number: 5 (lower is better)
Translates to: VCHPRRRLVHLLPWM*VGIIGGCPDGNARA
Trigger: GGCCCTCGCATTCCCATCTGGGCAGCCGCCAATTATGCCAACGCACATCCATGGCAGCAGATGGACAAGGCGTCTCCTGGGGTGGCATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
ENST00000416337.1
CDS CCA 90 bp GGGGGTGTATGCCACCCCAGGAGACGCCTTGTCCATCTGCTGCCATaGATGTGCGTTGGCATAATTGGCGGCTGCCCAGATGGGAATGCG +
Preference number: 5 (lower is better)
Translates to: GGVCHPRRRLVHLLP*MCVGIIGGCPDGNA
Trigger: CGCATTCCCATCTGGGCAGCCGCCAATTATGCCAACGCACATCCATGGCAGCAGATGGACAAGGCGTCTCCTGGGGTGGCATACACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
ENST00000416337.1
CDS CCA 90 bp TCTAGGGACAGGTGTGGGGGCTGCCTCCTCTGGCTGGGAAGAGGCTaGTTCCACAGGACCAGGCTTGGAGCTACATGTAGAACTGGGCAG +
Preference number: 5 (lower is better)
Translates to: SRDRCGGCLLWLGRG*FHRTRLGATCRTGQ
Trigger: CTGCCCAGTTCTACATGTAGCTCCAAGCCTGGTCCTGTGGAACCAGCCTCTTCCCAGCCAGAGGAGGCAGCCCCCACACCTGTCCCTAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS CCA 90 bp GACTCCGACAGTCTAGGGACAGGTGTGGGGGCTGCCTCCTCTGGCTaGGAAGAGGCTGGTTCCACAGGACCAGGCTTGGAGCTACATGTA +
Preference number: 5 (lower is better)
Translates to: DSDSLGTGVGAASSG*EEAGSTGPGLELHV
Trigger: TACATGTAGCTCCAAGCCTGGTCCTGTGGAACCAGCCTCTTCCCAGCCAGAGGAGGCAGCCCCCACACCTGTCCCTAGACTGTCGGAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp CTGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGACCCCAGGAGACGCCTaGTCCATCTGCTGCCATGGA +
Preference number: 5 (lower is better)
Translates to: LSGRPCQSPSLPPPYLCRTPGDA*SICCHG
Trigger: TCCATGGCAGCAGATGGACAAGGCGTCTCCTGGGGT...CCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp CATACAGGAACGAGGTCCCAACAGGGCAGACGTGGCAGACCCAGTTCAGTCCCACCAGGGGTGCTCTCCTaGGTCAGCTGCTGCTCGAAC +
Preference number: 5 (lower is better)
Translates to: HTGTRSQQGRRGRPSSVPPGVLS*VSCCSN
Trigger: GTTCGAGCAGCAGCTGACCAAGGAGAGCACCCCTGG...TGGGACTGAACTGGGTCTGCCACGTCTGCCCTGTTGGGACCTCGTTCCTGTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp AGCAGGGAAAGGGCACAGGGCGGAGGTCAAGCTCTGCTGGAGTTGGGGGAGCTGTCTTTGATCAGACCCTaGGACCCTCAAAGCCCCTGC +
Preference number: 5 (lower is better)
Translates to: SRERAQGGGQALLELGELSLIRP*DPQSPC
Trigger: GCAGGGGCTTTGAGGGTCCAAGGGTCTGATCAAAGA...CAGCTCCCCCAACTCCAGCAGAGCTTGACCTCCGCCCTGTGCCCTTTCCCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS GCA 90 bp AGGACTGGGGGCTCCTTGGGCCCAGGGGTGCTCTCCTTGGTCAGCTaGTGCTCGAACAGAGCACTTCTAGATACAGAGTTGGACCCAGAC +
Preference number: 5 (lower is better)
Translates to: RTGGSLGPGVLSLVS*CSNRALLDTELDPD
Trigger: GTCTGGGTCCAACTCTGTATCTAGAAGTGCTCTGTTCGAGCAGCAGCTGACCAAGGAGAGCACCCCTGGGCCCAAGGAGCCCCCAGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp AGGGGCTCTGCTCATCACAGGCTATCAAGGATGACAGCAGACCCCTCCCTTCTGCCAGGGGTGCTCTCCTaGGTCAGCTGCTGCTCGAAC +
Preference number: 5 (lower is better)
Translates to: RGSAHHRLSRMTADPSLLPGVLS*VSCCSN
Trigger: GTTCGAGCAGCAGCTGACCAAGGAGAGCACCCCTGG...CAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp CAAAACGACCCCCTCGTGGGAGCAGGCCTGGGTGAGACGGCACTCCCAGAAGACATGGGAAACAAAGACTaGCTGGTAGGCAGCCACTGC +
Preference number: 5 (lower is better)
Translates to: QNDPLVGAGLGETALPEDMGNKD*LVGSHC
Trigger: GCAGTGGCTGCCTACCAGCAAGTCTTTGTTTCCCAT...GTCTTCTGGGAGTGCCGTCTCACCCAGGCCTGCTCCCACGAGGGGGTCGTTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp AGCAGGGAAAGGGCACAGGGCGGAGGTCAAGCTCTGCTGGAGTTGGGGGAGCTGAGGGACTTGAACTTCTaGTCCAAGCACCAGAGTGGG +
Preference number: 5 (lower is better)
Translates to: SRERAQGGGQALLELGELRDLNF*SKHQSG
Trigger: CCCACTCTGGTGCTTGGACAAGAAGTTCAAGTCCCT...CAGCTCCCCCAACTCCAGCAGAGCTTGACCTCCGCCCTGTGCCCTTTCCCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp CAAAACGACCCCCTCGTGGGAGCAGGCCTGGGTGAGACGGCACTCCCAGAAGACAGGGACTTGAACTTCTaGTCCAAGCACCAGAGTGGG +
Preference number: 5 (lower is better)
Translates to: QNDPLVGAGLGETALPEDRDLNF*SKHQSG
Trigger: CCCACTCTGGTGCTTGGACAAGAAGTTCAAGTCCCT...GTCTTCTGGGAGTGCCGTCTCACCCAGGCCTGCTCCCACGAGGGGGTCGTTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp CAAAACGACCCCCTCGTGGGAGCAGGCCTGGGTGAGACGGCACTCCCAGAAGACAGACAAACAGGTATGTaGCCCTGGGATGGATGCAGG +
Preference number: 5 (lower is better)
Translates to: QNDPLVGAGLGETALPEDRQTGM*PWDGCR
Trigger: CCTGCATCCATCCCAGGGCAACATACCTGTTTGTCT...GTCTTCTGGGAGTGCCGTCTCACCCAGGCCTGCTCCCACGAGGGGGTCGTTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS GCA 90 bp ACTGGGGGCTCCTTGGGCCCAGGGGTGCTCTCCTTGGTCAGCTGCTaGTCGAACAGAGCACTTCTAGATACAGAGTTGGACCCAGACACA +
Preference number: 5 (lower is better)
Translates to: TGGSLGPGVLSLVSC*SNRALLDTELDPDT
Trigger: TGTGTCTGGGTCCAACTCTGTATCTAGAAGTGCTCTGTTCGAGCAGCAGCTGACCAAGGAGAGCACCCCTGGGCCCAAGGAGCCCCCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS CCA 90 bp AGCCACACAGGCCACTTCATCATGAGGGGCAGCATTGTTCCCACCTaGGCTGTGTTCAGAACCCAGGAGAAAGTGGTGGCTCTCCTGGGG +
Preference number: 5 (lower is better)
Translates to: SHTGHFIMRGSIVPT*AVFRTQEKVVALLG
Trigger: CCCCAGGAGAGCCACCACTTTCTCCTGGGTTCTGAACACAGCCCAGGTGGGAACAATGCTGCCCCTCATGATGAAGTGGCCTGTGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp TCAAGGATGACAGCAGACCCCTCCCTTCTGCCGCAGTTACACTTACAGGTGGACACCCCAGGAGACGCCTaGTCCATCTGCTGCCATGGA +
Preference number: 5 (lower is better)
Translates to: SRMTADPSLLPQLHLQVDTPGDA*SICCHG
Trigger: TCCATGGCAGCAGATGGACAAGGCGTCTCCTGGGGT...GTCCACCTGTAAGTGTAACTGCGGCAGAAGGGAGGGGTCTGCTGTCATCCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp CTCTGCTGGAGTTGGGGGAGCTGGTTCTGCTCAGCGCAGAGTCCAAAACAAGCGTCTTTGATCAGACCCTaGGACCCTCAAAGCCCCTGC +
Preference number: 5 (lower is better)
Translates to: LCWSWGSWFCSAQSPKQASLIRP*DPQSPC
Trigger: GCAGGGGCTTTGAGGGTCCAAGGGTCTGATCAAAGA...CGCTTGTTTTGGACTCTGCGCTGAGCAGAACCAGCTCCCCCAACTCCAGCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp AACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACTGCCAGAGTCCATCGTaGCCTCCACCCTACCTGTGC +
Preference number: 5 (lower is better)
Translates to: NLDITTSRPYLPFWAEPNCQSPS*PPPYLC
Trigger: GCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCA...GTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp CTCTGCTGGAGTTGGGGGAGCTGGTTCTGCTCAGCGCAGAGTCCAAAACAAGCGACGCTGGGTGGCTGCTaGTACTTCTCCATACTGAGC +
Preference number: 5 (lower is better)
Translates to: LCWSWGSWFCSAQSPKQATLGGC*YFSILS
Trigger: GCTCAGTATGGAGAAGTACAAGCAGCCACCCAGCGT...CGCTTGTTTTGGACTCTGCGCTGAGCAGAACCAGCTCCCCCAACTCCAGCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp CATACAGGAACGAGGTCCCAACAGGGCAGACGTGGCAGACCCAGTTCAGTCCCATCCACAGGACCAGGCTaGGAGCTACATGTAGAACTG +
Preference number: 5 (lower is better)
Translates to: HTGTRSQQGRRGRPSSVPSTGPG*ELHVEL
Trigger: CAGTTCTACATGTAGCTCCAAGCCTGGTCCTGTGGA...TGGGACTGAACTGGGTCTGCCACGTCTGCCCTGTTGGGACCTCGTTCCTGTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp GGCAAGGGGCTTGCATCCCACCTTCCTGCATCCAAACCTTCCAGCTGCCCAGAAATGGGAAACAAAGACTaGCTGGTAGGCAGCCACTGC +
Preference number: 5 (lower is better)
Translates to: GKGLASHLPASKPSSCPEMGNKD*LVGSHC
Trigger: GCAGTGGCTGCCTACCAGCAAGTCTTTGTTTCCCAT...TTCTGGGCAGCTGGAAGGTTTGGATGCAGGAAGGTGGGATGCAAGCCCCTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp CAAAACGACCCCCTCGTGGGAGCAGGCCTGGGTGAGACGGCACTCCCAGAAGACAAACCTGAAAGGGACTaGAACTTCTTGTCCAAGCAC +
Preference number: 5 (lower is better)
Translates to: QNDPLVGAGLGETALPEDKPERD*NFLSKH
Trigger: GTGCTTGGACAAGAAGTTCAAGTCCCTTTCAGGTTT...GTCTTCTGGGAGTGCCGTCTCACCCAGGCCTGCTCCCACGAGGGGGTCGTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp CCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCAACGCTGGGTGGCTGCTaGTACTTCTCCATACTGAGC +
Preference number: 5 (lower is better)
Translates to: PGHHHFKALPSFLGRAQPTLGGC*YFSILS
Trigger: GCTCAGTATGGAGAAGTACAAGCAGCCACCCAGCGT...TGGTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp CTGTGCAGGAAACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCGTGGACAGATGTGGCTaGCACGACACAACAGGACAG +
Preference number: 5 (lower is better)
Translates to: LCRKPGHHHFKALPSFLGVDRCG*HDTTGQ
Trigger: CTGTCCTGTTGTGTCGTGCAAGCCACATCTGTCCAC...GCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp ACACACTGCACACACTGGGCGGCTGTACCTGCCTATCCTGTGGTAAACTTGGCTGTGGACAGATGTGGCTaGCACGACACAACAGGACAG +
Preference number: 5 (lower is better)
Translates to: THCTHWAAVPAYPVVNLAVDRCG*HDTTGQ
Trigger: CTGTCCTGTTGTGTCGTGCAAGCCACATCTGTCCAC...AGCCAAGTTTACCACAGGATAGGCAGGTACAGCCGCCCAGTGTGTGCAGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp CAAAACGACCCCCTCGTGGGAGCAGGCCTGGGTGAGACGGCACTCCCAGAAGACAAAACTGTTCGGGTCTaGAACAACTTCCTTGAGATC +
Preference number: 5 (lower is better)
Translates to: QNDPLVGAGLGETALPEDKTVRV*NNFLEI
Trigger: GATCTCAAGGAAGTTGTTCAAGACCCGAACAGTTTT...GTCTTCTGGGAGTGCCGTCTCACCCAGGCCTGCTCCCACGAGGGGGTCGTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp AACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACGCCAGCTCACTTGCTTaGCTACCAGGGCTATACCTG +
Preference number: 5 (lower is better)
Translates to: NLDITTSRPYLPFWAEPNASSLA*LPGLYL
Trigger: CAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCTGGC...GTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp CTGTGCAGGAAACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCACGCTGGGTGGCTGCTaGTACTTCTCCATACTGAGC +
Preference number: 5 (lower is better)
Translates to: LCRKPGHHHFKALPSFLGTLGGC*YFSILS
Trigger: GCTCAGTATGGAGAAGTACAAGCAGCCACCCAGCGT...GCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp GGCAAGGGGCTTGCATCCCACCTTCCTGCATCCAAACCTTCCAGCTGCCCAGAATTTAATGAGCACCAATaGTGTACCAGGCCACAGAGC +
Preference number: 5 (lower is better)
Translates to: GKGLASHLPASKPSSCPEFNEHQ*CTRPQS
Trigger: GCTCTGTGGCCTGGTACACAATTGGTGCTCATTAAA...TTCTGGGCAGCTGGAAGGTTTGGATGCAGGAAGGTGGGATGCAAGCCCCTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp AACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACATGGGAAACAAAGACTaGCTGGTAGGCAGCCACTGC +
Preference number: 5 (lower is better)
Translates to: NLDITTSRPYLPFWAEPNMGNKD*LVGSHC
Trigger: GCAGTGGCTGCCTACCAGCAAGTCTTTGTTTCCCAT...GTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp CTGTGCAGGAAACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCCTTCTGCCAGCTCACTaGCTTTGCTACCAGGGCTAT +
Preference number: 5 (lower is better)
Translates to: LCRKPGHHHFKALPSFLGLLPAH*LCYQGY
Trigger: ATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAG...GCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp CTGTGCAGGAAACCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGACAAACAGGTATGTaGCCCTGGGATGGATGCAGG +
Preference number: 5 (lower is better)
Translates to: LCRKPGHHHFKALPSFLGRQTGM*PWDGCR
Trigger: CCTGCATCCATCCCAGGGCAACATACCTGTTTGTCT...GCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGGTTTCCTGCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp TCAAGGATGACAGCAGACCCCTCCCTTCTGCCGCAGTTACACTTACAGGTGGACAGACAAACAGGTATGTaGCCCTGGGATGGATGCAGG +
Preference number: 5 (lower is better)
Translates to: SRMTADPSLLPQLHLQVDRQTGM*PWDGCR
Trigger: CCTGCATCCATCCCAGGGCAACATACCTGTTTGTCT...GTCCACCTGTAAGTGTAACTGCGGCAGAAGGGAGGGGTCTGCTGTCATCCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp CTCTGCTGGAGTTGGGGGAGCTGGTTCTGCTCAGCGCAGAGTCCAAAACAAGCGCAGGTGGACTCAAGGTaGAATGTCAAAGGCAGAAAG +
Preference number: 5 (lower is better)
Translates to: LCWSWGSWFCSAQSPKQAQVDSR*NVKGRK
Trigger: CTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTG...CGCTTGTTTTGGACTCTGCGCTGAGCAGAACCAGCTCCCCCAACTCCAGCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp GGCAAGGGGCTTGCATCCCACCTTCCTGCATCCAAACCTTCCAGCTGCCCAGAACAGGTGGACTCAAGGTaGAATGTCAAAGGCAGAAAG +
Preference number: 5 (lower is better)
Translates to: GKGLASHLPASKPSSCPEQVDSR*NVKGRK
Trigger: CTTTCTGCCTTTGACATTCAACCTTGAGTCCACCTG...TTCTGGGCAGCTGGAAGGTTTGGATGCAGGAAGGTGGGATGCAAGCCCCTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp CTTTATTTGCCTTGCTCCTTTATTGCTGGATCTTTGGGCTTTTCCAGTTCTGCTCCAGGCGCCACCCTCTaGCCGGAGTCGGGAACGCCT +
Preference number: 5 (lower is better)
Translates to: LYLPCSFIAGSLGFSSSAPGATL*PESGTP
Trigger: AGGCGTTCCCGACTCCGGCAAGAGGGTGGCGCCTGG...AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCAAATAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407472.5
CDS-3UTR CAA 90 bp TGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGAAAACCTGAAAGGGACTaGAACTTCTTGTCCAAGCAC +
Preference number: 5 (lower is better)
Translates to: CLEGHARVHRCLHPTCAGKPERD*NFLSKH
Trigger: GTGCTTGGACAAGAAGTTCAAGTCCCTTTCAGGTTT...TCCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp AGCAGGGAAAGGGCACAGGGCGGAGGTCAAGCTCTGCTGGAGTTGGGGGAGCTGTGCATGTGCCTAGAATaGTTACGTGGTCAAATTATA +
Preference number: 5 (lower is better)
Translates to: SRERAQGGGQALLELGELCMCLE*LRGQII
Trigger: TATAATTTGACCACGTAACAATTCTAGGCACATGCA...CAGCTCCCCCAACTCCAGCAGAGCTTGACCTCCGCCCTGTGCCCTTTCCCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp GGCAAGGGGCTTGCATCCCACCTTCCTGCATCCAAACCTTCCAGCTGCCCAGAAATGAGGAAATGTCTGTaGTTTAAGTCCCCTAGCCTG +
Preference number: 5 (lower is better)
Translates to: GKGLASHLPASKPSSCPEMRKCL*FKSPSL
Trigger: CAGGCTAGGGGACTTAAACAACAGACATTTCCTCAT...TTCTGGGCAGCTGGAAGGTTTGGATGCAGGAAGGTGGGATGCAAGCCCCTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS TCA 90 bp CAGCATGGTACTCAGCAAAACTGTTCGGGTCTTGAACAACTTCCTTaGGATCCTGGCAGAAGAGCTCGTAATCGTCAGGCAGGGGCAGGT +
Preference number: 5 (lower is better)
Translates to: QHGTQQNCSGLEQLP*DPGRRARNRQAGAG
Trigger: ACCTGCCCCTGCCTGACGATTACGAGCTCTTCTGCCAGGATCTCAAGGAAGTTGTTCAAGACCCGAACAGTTTTGCTGAGTACCATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp GGAGGGGAGGAGGCAAGGCCAACCTCCAGTCCCTGCTCTAAACCCCCATGTAGTTTCCAAGGTTTCCAGTaGTTTTACCTACAAGGTATC +
Preference number: 5 (lower is better)
Translates to: GGEEARPTSSPCSKPPCSFQGFQ*FYLQGI
Trigger: GATACCTTGTAGGTAAAACAACTGGAAACCTTGGAA...ACTACATGGGGGTTTAGAGCAGGGACTGGAGGTTGGCCTTGCCTCCTCCCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp CATACAGGAACGAGGTCCCAACAGGGCAGACGTGGCAGACCCAGTTCAGTCCCATTTATTGCTGGATCTTaGGGCTTTTCCAGTTCTGCT +
Preference number: 5 (lower is better)
Translates to: HTGTRSQQGRRGRPSSVPFIAGS*GFSSSA
Trigger: AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAA...TGGGACTGAACTGGGTCTGCCACGTCTGCCCTGTTGGGACCTCGTTCCTGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp CCTAGGTGGATGCTGCATGACTGGCCCTCAGACACACGGCAGACCATAACTCACTGCCTTGCTCCTTTATaGCTGGATCTTTGGGCTTTT +
Preference number: 5 (lower is better)
Translates to: PRWMLHDWPSDTRQTITHCLAPL*LDLWAF
Trigger: AAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCA...GTGAGTTATGGTCTGCCGTGTGTCTGAGGGCCAGTCATGCAGCATCCACCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp CTCTGCTGGAGTTGGGGGAGCTGGTTCTGCTCAGCGCAGAGTCCAAAACAAGCGACAGCTTTATTTGCCTaGCTCCTTTATTGCTGGATC +
Preference number: 5 (lower is better)
Translates to: LCWSWGSWFCSAQSPKQATALFA*LLYCWI
Trigger: GATCCAGCAATAAAGGAGCAAGGCAAATAAAGCTGT...CGCTTGTTTTGGACTCTGCGCTGAGCAGAACCAGCTCCCCCAACTCCAGCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp TGTCTGGAAGGCCATGCCAGAGTCCATCGTTGCCTCCACCCTACCTGTGCAGGAACAGCTTTATTTGCCTaGCTCCTTTATTGCTGGATC +
Preference number: 5 (lower is better)
Translates to: CLEGHARVHRCLHPTCAGTALFA*LLYCWI
Trigger: GATCCAGCAATAAAGGAGCAAGGCAAATAAAGCTGT...TCCTGCACAGGTAGGGTGGAGGCAACGATGGACTCTGGCATGGCCTTCCAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp CCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCAATGAGGAAATGTCTGTaGTTTAAGTCCCCTAGCCTG +
Preference number: 5 (lower is better)
Translates to: PGHHHFKALPSFLGRAQPMRKCL*FKSPSL
Trigger: CAGGCTAGGGGACTTAAACAACAGACATTTCCTCAT...TGGTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp CCATATTTATTTGGCCCGTTTCAAAGTCCTCTATTCTCTGCTCATCTGTCCACATCCACACTGACCCTCTaGCCGGAGTCGGGAACGCCT +
Preference number: 5 (lower is better)
Translates to: PYLFGPFQSPLFSAHLSTSTLTL*PESGTP
Trigger: AGGCGTTCCCGACTCCGGCAAGAGGGTCAGTGTGGA...TGTGGACAGATGAGCAGAGAATAGAGGACTTTGAAACGGGCCAAATAAATATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328554.9
ENST00000405640.1
CDS-3UTR CAA 90 bp AGGGGCTCTGCTCATCACAGGCTATCAAGGATGACAGCAGACCCCTCCCTTCTGAAAACTGTTCGGGTCTaGAACAACTTCCTTGAGATC +
Preference number: 5 (lower is better)
Translates to: RGSAHHRLSRMTADPSLLKTVRV*NNFLEI
Trigger: GATCTCAAGGAAGTTGTTCAAGACCCGAACAGTTTT...CAGAAGGGAGGGGTCTGCTGTCATCCTTGATAGCCTGTGATGAGCAGAGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp CCTAGGTGGATGCTGCATGACTGGCCCTCAGACACACGGCAGACCATAACTCACAGGAAACATCATTCTTaGCCAAGATGCTATCCCACT +
Preference number: 5 (lower is better)
Translates to: PRWMLHDWPSDTRQTITHRKHHS*PRCYPT
Trigger: AGTGGGATAGCATCTTGGCAAAGAATGATGTTTCCT...GTGAGTTATGGTCTGCCGTGTGTCTGAGGGCCAGTCATGCAGCATCCACCTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp CCTGGACATCACCACTTCAAGGCCCTACCTTCCTTTCTGGGCAGAGCCCAACCAAGGAAACATCATTCTTaGCCAAGATGCTATCCCACT +
Preference number: 5 (lower is better)
Translates to: PGHHHFKALPSFLGRAQPRKHHS*PRCYPT
Trigger: AGTGGGATAGCATCTTGGCAAAGAATGATGTTTCCT...TGGTTGGGCTCTGCCCAGAAAGGAAGGTAGGGCCTTGAAGTGGTGATGTCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCGCCAGCTCACTTGCTTaGCTACCAGGGCTATACCTG +
Preference number: 5 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFASSLA*LPGLYL
Trigger: CAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCTGGC...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp CCTAGGTGGATGCTGCATGACTGGCCCTCAGACACACGGCAGACCATAACTCACTTCCAAGGTTTCCAGTaGTTTTACCTACAAGGTATC +
Preference number: 5 (lower is better)
Translates to: PRWMLHDWPSDTRQTITHFQGFQ*FYLQGI
Trigger: GATACCTTGTAGGTAAAACAACTGGAAACCTTGGAA...GTGAGTTATGGTCTGCCGTGTGTCTGAGGGCCAGTCATGCAGCATCCACCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp CTCTGCTGGAGTTGGGGGAGCTGGTTCTGCTCAGCGCAGAGTCCAAAACAAGCGAATTTCCATATTTATTaGGCCCGTTTCAAAGTCCTC +
Preference number: 5 (lower is better)
Translates to: LCWSWGSWFCSAQSPKQANFHIY*ARFKVL
Trigger: GAGGACTTTGAAACGGGCCAAATAAATATGGAAATT...CGCTTGTTTTGGACTCTGCGCTGAGCAGAACCAGCTCCCCCAACTCCAGCAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp GGCAAGGGGCTTGCATCCCACCTTCCTGCATCCAAACCTTCCAGCTGCCCAGAAAATTTCCATATTTATTaGGCCCGTTTCAAAGTCCTC +
Preference number: 5 (lower is better)
Translates to: GKGLASHLPASKPSSCPENFHIY*ARFKVL
Trigger: GAGGACTTTGAAACGGGCCAAATAAATATGGAAATT...TTCTGGGCAGCTGGAAGGTTTGGATGCAGGAAGGTGGGATGCAAGCCCCTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp CAGTATGAGAAGGTCCACTTCTCCATACCTCCACAACTCTGGGCATCTAAAACTTCCACAGGACCAGGCTaGGAGCTACATGTAGAACTG +
Preference number: 5 (lower is better)
Translates to: QYEKVHFSIPPQLWASKTSTGPG*ELHVEL
Trigger: CAGTTCTACATGTAGCTCCAAGCCTGGTCCTGTGGA...AGTTTTAGATGCCCAGAGTTGTGGAGGTATGGAGAAGTGGACCTTCTCATACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp AAGACTGAAAATGGGTTTCTTCTGCCAGCTCACTTGCTTTGCTACCAGGGCTATCTTCTGCCAGCTCACTaGCTTTGCTACCAGGGCTAT +
Preference number: 5 (lower is better)
Translates to: KTENGFLLPAHLLCYQGYLLPAH*LCYQGY
Trigger: ATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAG...ATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTTCAGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp CCATATTTATTTGGCCCGTTTCAAAGTCCTCTATTCTCTGCTCATCTGTCCACAGTGGACAGATGTGGCTaGCACGACACAACAGGACAG +
Preference number: 5 (lower is better)
Translates to: PYLFGPFQSPLFSAHLSTVDRCG*HDTTGQ
Trigger: CTGTCCTGTTGTGTCGTGCAAGCCACATCTGTCCAC...TGTGGACAGATGAGCAGAGAATAGAGGACTTTGAAACGGGCCAAATAAATATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp AGCTCACTTGCTTTGCTACCAGGGCTATACCTGCTTTCTAAAAATAGCTTCCCATCCACAGGACCAGGCTaGGAGCTACATGTAGAACTG +
Preference number: 5 (lower is better)
Translates to: SSLALLPGLYLLSKNSFPSTGPG*ELHVEL
Trigger: CAGTTCTACATGTAGCTCCAAGCCTGGTCCTGTGGA...TGGGAAGCTATTTTTAGAAAGCAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp CTTTATTTGCCTTGCTCCTTTATTGCTGGATCTTTGGGCTTTTCCAGTTCTGCTTCTTTGATCAGACCCTaGGACCCTCAAAGCCCCTGC +
Preference number: 5 (lower is better)
Translates to: LYLPCSFIAGSLGFSSSASLIRP*DPQSPC
Trigger: GCAGGGGCTTTGAGGGTCCAAGGGTCTGATCAAAGA...AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCAAATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCCTAGAAAACCCCTCCTaGTGTGGAACAGGTCTTTCT +
Preference number: 5 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFLENPS*CGTGLS
Trigger: AGAAAGACCTGTTCCACACAAGGAGGGGTTTTCTAG...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp CCATATTTATTTGGCCCGTTTCAAAGTCCTCTATTCTCTGCTCATCTGTCCACAGCCAGCTCACTTGCTTaGCTACCAGGGCTATACCTG +
Preference number: 5 (lower is better)
Translates to: PYLFGPFQSPLFSAHLSTASSLA*LPGLYL
Trigger: CAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCTGGC...TGTGGACAGATGAGCAGAGAATAGAGGACTTTGAAACGGGCCAAATAAATATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp CGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCAAGTAAACCTGAAAGGGACTaGAACTTCTTGTCCAAGCAC +
Preference number: 5 (lower is better)
Translates to: RGHRCGQNYVPSIFLCSSKPERD*NFLSKH
Trigger: GTGCTTGGACAAGAAGTTCAAGTCCCTTTCAGGTTT...ACTTGAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp GAAAACCCCTCCTTGTGTGGAACAGGTCTTTCTTCATTCCATTCCTCTGGGCCTTTTATTGCTGGATCTTaGGGCTTTTCCAGTTCTGCT +
Preference number: 5 (lower is better)
Translates to: ENPSLCGTGLSSFHSSGPFIAGS*GFSSSA
Trigger: AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAA...AGGCCCAGAGGAATGGAATGAAGAAAGACCTGTTCCACACAAGGAGGGGTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp CTATCGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCTGCCTTGCTCCTTTATaGCTGGATCTTTGGGCTTTT +
Preference number: 5 (lower is better)
Translates to: LSRAPLWAELCPFNIFMFCLAPL*LDLWAF
Trigger: AAAAGCCCAAAGATCCAGCAATAAAGGAGCAAGGCA...GAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCGATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp AGCTCACTTGCTTTGCTACCAGGGCTATACCTGCTTTCTAAAAATAGCTTCCCATTTAATGAGCACCAATaGTGTACCAGGCCACAGAGC +
Preference number: 5 (lower is better)
Translates to: SSLALLPGLYLLSKNSFPFNEHQ*CTRPQS
Trigger: GCTCTGTGGCCTGGTACACAATTGGTGCTCATTAAA...TGGGAAGCTATTTTTAGAAAGCAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp AGCTCACTTGCTTTGCTACCAGGGCTATACCTGCTTTCTAAAAATAGCTTCCCACTAGAAAACCCCTCCTaGTGTGGAACAGGTCTTTCT +
Preference number: 5 (lower is better)
Translates to: SSLALLPGLYLLSKNSFPLENPS*CGTGLS
Trigger: AGAAAGACCTGTTCCACACAAGGAGGGGTTTTCTAG...TGGGAAGCTATTTTTAGAAAGCAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp CAGTATGAGAAGGTCCACTTCTCCATACCTCCACAACTCTGGGCATCTAAAACTATGAGGAAATGTCTGTaGTTTAAGTCCCCTAGCCTG +
Preference number: 5 (lower is better)
Translates to: QYEKVHFSIPPQLWASKTMRKCL*FKSPSL
Trigger: CAGGCTAGGGGACTTAAACAACAGACATTTCCTCAT...AGTTTTAGATGCCCAGAGTTGTGGAGGTATGGAGAAGTGGACCTTCTCATACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp CCATATTTATTTGGCCCGTTTCAAAGTCCTCTATTCTCTGCTCATCTGTCCACATTTAATGAGCACCAATaGTGTACCAGGCCACAGAGC +
Preference number: 5 (lower is better)
Translates to: PYLFGPFQSPLFSAHLSTFNEHQ*CTRPQS
Trigger: GCTCTGTGGCCTGGTACACAATTGGTGCTCATTAAA...TGTGGACAGATGAGCAGAGAATAGAGGACTTTGAAACGGGCCAAATAAATATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp AAGACTGAAAATGGGTTTCTTCTGCCAGCTCACTTGCTTTGCTACCAGGGCTATTTTATTGCTGGATCTTaGGGCTTTTCCAGTTCTGCT +
Preference number: 5 (lower is better)
Translates to: KTENGFLLPAHLLCYQGYFIAGS*GFSSSA
Trigger: AGCAGAACTGGAAAAGCCCAAAGATCCAGCAATAAA...ATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTTCAGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp AAGACTGAAAATGGGTTTCTTCTGCCAGCTCACTTGCTTTGCTACCAGGGCTATACAGCTTTATTTGCCTaGCTCCTTTATTGCTGGATC +
Preference number: 5 (lower is better)
Translates to: KTENGFLLPAHLLCYQGYTALFA*LLYCWI
Trigger: GATCCAGCAATAAAGGAGCAAGGCAAATAAAGCTGT...ATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTTCAGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp AAGACTGAAAATGGGTTTCTTCTGCCAGCTCACTTGCTTTGCTACCAGGGCTATTTCCAAGGTTTCCAGTaGTTTTACCTACAAGGTATC +
Preference number: 5 (lower is better)
Translates to: KTENGFLLPAHLLCYQGYFQGFQ*FYLQGI
Trigger: GATACCTTGTAGGTAAAACAACTGGAAACCTTGGAA...ATAGCCCTGGTAGCAAAGCAAGTGAGCTGGCAGAAGAAACCCATTTTCAGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp CGCGGGCACCGCTGTGGGCAGAACTATGTCCCTTCAATATTTTTATGTTCAAGTTGCATGTGCCTAGAATaGTTACGTGGTCAAATTATA +
Preference number: 5 (lower is better)
Translates to: RGHRCGQNYVPSIFLCSSCMCLE*LRGQII
Trigger: TATAATTTGACCACGTAACAATTCTAGGCACATGCA...ACTTGAACATAAAAATATTGAAGGGACATAGTTCTGCCCACAGCGGTGCCCGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp CCATATTTATTTGGCCCGTTTCAAAGTCCTCTATTCTCTGCTCATCTGTCCACAAAAACTGTTCGGGTCTaGAACAACTTCCTTGAGATC +
Preference number: 5 (lower is better)
Translates to: PYLFGPFQSPLFSAHLSTKTVRV*NNFLEI
Trigger: GATCTCAAGGAAGTTGTTCAAGACCCGAACAGTTTT...TGTGGACAGATGAGCAGAGAATAGAGGACTTTGAAACGGGCCAAATAAATATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp AGCTCACTTGCTTTGCTACCAGGGCTATACCTGCTTTCTAAAAATAGCTTCCCAAATTTCCATATTTATTaGGCCCGTTTCAAAGTCCTC +
Preference number: 5 (lower is better)
Translates to: SSLALLPGLYLLSKNSFPNFHIY*ARFKVL
Trigger: GAGGACTTTGAAACGGGCCAAATAAATATGGAAATT...TGGGAAGCTATTTTTAGAAAGCAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS-3UTR CAA 90 bp AGCTCACTTGCTTTGCTACCAGGGCTATACCTGCTTTCTAAAAATAGCTTCCCATGCATGTGCCTAGAATaGTTACGTGGTCAAATTATA +
Preference number: 5 (lower is better)
Translates to: SSLALLPGLYLLSKNSFPCMCLE*LRGQII
Trigger: TATAATTTGACCACGTAACAATTCTAGGCACATGCA...TGGGAAGCTATTTTTAGAAAGCAGGTATAGCCCTGGTAGCAAAGCAAGTGAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS TCA 72 bp GGTGCCCCCACAAACCCCCGGCGCGGACCGAGAAACTaGGGCCCGCAGACCGAAGGCACTGCGACCCAGGCT +
Preference number: 6 (lower is better)
Translates to: GAPTNPRRGPRN*GPQTEGTATQA
Trigger: AGCCTGGGTCGCAGTGCCTTCGGTCTGCGGGCCTCAGTTTCTCGGTCCGCGCCGGGGGTTTGTGGGGGCACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000405640.1
CDS GCA 72 bp GCCACCGAGAAACTGAGGCCCGCAGACCGAAGGCACTaGGACCCAGGCTGGGGCTCCGAGTGCCCCTCTGCG +
Preference number: 6 (lower is better)
Translates to: ATEKLRPADRRH*DPGWGSECPSA
Trigger: CGCAGAGGGGCACTCGGAGCCCCAGCCTGGGTCGCAGTGCCTTCGGTCTGCGGGCCTCAGTTTCTCGGTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328554.9
CDS CCA 72 bp CTGAGGCCCGCAGACCGAAGGCACTGCGACCCAGGCTaGGGCTCCGAGTGCCCCTCTGCGGATCAGAAGTCG +
Preference number: 6 (lower is better)
Translates to: LRPADRRHCDPG*GSECPSADQKS
Trigger: CGACTTCTGATCCGCAGAGGGGCACTCGGAGCCCCAGCCTGGGTCGCAGTGCCTTCGGTCTGCGGGCCTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328554.9
ENST00000405640.1
CDS CCA 72 bp CGCGAAGAGGGTCCTGGGATCCGTAGCCACAGACCGTaGGACGGGCCTCCCTCTGAGGGCGAGAGTCCAGGC +
Preference number: 6 (lower is better)
Translates to: REEGPGIRSHRP*DGPPSEGESPG
Trigger: GCCTGGACTCTCGCCCTCAGAGGGAGGCCCGTCCCACGGTCTGTGGCTACGGATCCCAGGACCCTCTTCGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
ENST00000416337.1
ENST00000484072.5
CDS CCA 72 bp GAGTCCAGGCGCCACCGAAGGCACTGCGACCCAGGCTaGGGCTCCGAGTGCCCCTCTGCGGATCAGAAGTCG +
Preference number: 6 (lower is better)
Translates to: ESRRHRRHCDPG*GSECPSADQKS
Trigger: CGACTTCTGATCCGCAGAGGGGCACTCGGAGCCCCAGCCTGGGTCGCAGTGCCTTCGGTGGCGCCTGGACTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416337.1
CDS TCA 72 bp CGCCACCTAGAAAGTGGAGAACGAGATCGGCCGCCGTaGGGCCAGGCAAGGAGCGGGCGCGGCTTCCCGAGA +
Preference number: 6 (lower is better)
Translates to: RHLESGERDRPP*GQARSGRGFPR
Trigger: TCTCGGGAAGCCGCGCCCGCTCCTTGCCTGGCCTCACGGCGGCCGATCTCGTTCTCCACTTTCTAGGTGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405640.1
CDS CCA 72 bp CCACCTGGGCTGTGTTCAGAACCCAGGAGAAAGTGGTaGCTCTCCTGGGGTCTCCGGGGCCTCCACCACCTC +
Preference number: 6 (lower is better)
Translates to: PPGLCSEPRRKW*LSWGLRGLHHL
Trigger: GAGGTGGTGGAGGCCCCGGAGACCCCAGGAGAGCCACCACTTTCTCCTGGGTTCTGAACACAGCCCAGGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS CCA 72 bp CCTCTGAGGGCGAGAGTCCAGGCGCCACCTAGAAAGTaGAGAACGAGATCGGCCGCCGTGAGGCCAGGCAAG +
Preference number: 6 (lower is better)
Translates to: PLRARVQAPPRK*RTRSAAVRPGK
Trigger: CTTGCCTGGCCTCACGGCGGCCGATCTCGTTCTCCACTTTCTAGGTGGCGCCTGGACTCTCGCCCTCAGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405640.1
CDS CCA 72 bp ATGGATGTGCGTTGGCATAATTGGCGGCTGCCCAGATaGGAATGCGAGGGCCCTGCTGACGGCACCGGCCAC +
Preference number: 6 (lower is better)
Translates to: MDVRWHNWRLPR*ECEGPADGTGH
Trigger: GTGGCCGGTGCCGTCAGCAGGGCCCTCGCATTCCCATCTGGGCAGCCGCCAATTATGCCAACGCACATCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
ENST00000416337.1
CDS CCA 72 bp ACACAGCAGGGGTGGCCATGGCGGCTGGTAAAGACCTaGGGGCAGTACCCATGTCGAGTGCCAGGCCCTCTA +
Preference number: 6 (lower is better)
Translates to: TQQGWPWRLVKT*GQYPCRVPGPL
Trigger: TAGAGGGCCTGGCACTCGACATGGGTACTGCCCCCAGGTCTTTACCAGCCGCCATGGCCACCCCTGCTGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS CCA 72 bp TTCCCACCTGGGCTGTGTTCAGAACCCAGGAGAAAGTaGTGGCTCTCCTGGGGTCTCCGGGGCCTCCACCAC +
Preference number: 6 (lower is better)
Translates to: FPPGLCSEPRRK*WLSWGLRGLHH
Trigger: GTGGTGGAGGCCCCGGAGACCCCAGGAGAGCCACCACTTTCTCCTGGGTTCTGAACACAGCCCAGGTGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS CAA 90 bp GGAGAGCCAGCACTGGTGGGTGGTGGGGGTGTGGACAGATGTGGCTaGCACGACACAACAGGACAGGGATGGCTGAACAGGGCGTGGCAG +
Preference number: 6 (lower is better)
Translates to: GEPALVGGGGVDRCG*HDTTGQGWLNRAWQ
Trigger: CTGCCACGCCCTGTTCAGCCATCCCTGTCCTGTTGTGTCGTGCAAGCCACATCTGTCCACACCCCCACCACCCACCAGTGCTGGCTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
ENST00000416337.1
CDS TCA 72 bp GATGTGGCTTGCACGACACAACAGGACAGGGATGGCTaGACAGGGCGTGGCAGACCCGCACTGGTCCAGGCA +
Preference number: 6 (lower is better)
Translates to: DVACTTQQDRDG*TGRGRPALVQA
Trigger: TGCCTGGACCAGTGCGGGTCTGCCACGCCCTGTTCAGCCATCCCTGTCCTGTTGTGTCGTGCAAGCCACATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
ENST00000416337.1
CDS GCA 72 bp CTGCTGCCATGGATGTGCGTTGGCATAATTGGCGGCTaGCCAGATGGGAATGCGAGGGCCCTGCTGACGGCA +
Preference number: 6 (lower is better)
Translates to: LLPWMCVGIIGG*PDGNARALLTA
Trigger: TGCCGTCAGCAGGGCCCTCGCATTCCCATCTGGGCAGCCGCCAATTATGCCAACGCACATCCATGGCAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
ENST00000416337.1
CDS GCA 72 bp AGAAGCGGTCCAGTAGCCACGGGGAGCCATCAAAGGTaGCTGGGTCTGAGCCTGGTACCCAGCAGAAGTCCA +
Preference number: 6 (lower is better)
Translates to: RSGPVATGSHQR*LGLSLVPSRSP
Trigger: TGGACTTCTGCTGGGTACCAGGCTCAGACCCAGGCACCTTTGATGGCTCCCCGTGGCTACTGGACCGCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS CCA 72 bp TGTCCATCTGCTGCCATGGATGTGCGTTGGCATAATTaGCGGCTGCCCAGATGGGAATGCGAGGGCCCTGCT +
Preference number: 6 (lower is better)
Translates to: CPSAAMDVRWHN*RLPRWECEGPA
Trigger: AGCAGGGCCCTCGCATTCCCATCTGGGCAGCCGCCAATTATGCCAACGCACATCCATGGCAGCAGATGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
ENST00000416337.1
CDS CCA 72 bp TGCCACCCCAGGAGACGCCTTGTCCATCTGCTGCCATaGATGTGCGTTGGCATAATTGGCGGCTGCCCAGAT +
Preference number: 6 (lower is better)
Translates to: CHPRRRLVHLLP*MCVGIIGGCPD
Trigger: ATCTGGGCAGCCGCCAATTATGCCAACGCACATCCATGGCAGCAGATGGACAAGGCGTCTCCTGGGGTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
ENST00000416337.1
CDS TCA 72 bp CTATGGGGCGCTCAAGCCACACAGGCCACTTCATCATaGGGGGCAGCATTGTTCCCACCTGGGCTGTGTTCA +
Preference number: 6 (lower is better)
Translates to: LWGAQATQATSS*GAALFPPGLCS
Trigger: TGAACACAGCCCAGGTGGGAACAATGCTGCCCCTCATGATGAAGTGGCCTGTGTGGCTTGAGCGCCCCATAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS GCA 72 bp CCCAGGAGACGCCTTGTCCATCTGCTGCCATGGATGTaGGTTGGCATAATTGGCGGCTGCCCAGATGGGAAT +
Preference number: 6 (lower is better)
Translates to: PRRRLVHLLPWM*VGIIGGCPDGN
Trigger: ATTCCCATCTGGGCAGCCGCCAATTATGCCAACGCACATCCATGGCAGCAGATGGACAAGGCGTCTCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
ENST00000416337.1
CDS CCA 72 bp GAGACGCCTTGTCCATCTGCTGCCATGGATGTGCGTTaGCATAATTGGCGGCTGCCCAGATGGGAATGCGAG +
Preference number: 6 (lower is better)
Translates to: ETPCPSAAMDVR*HNWRLPRWECE
Trigger: CTCGCATTCCCATCTGGGCAGCCGCCAATTATGCCAACGCACATCCATGGCAGCAGATGGACAAGGCGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
ENST00000416337.1
CDS GCA 72 bp TCCTTGGGCCCAGGGGTGCTCTCCTTGGTCAGCTGCTaGTCGAACAGAGCACTTCTAGATACAGAGTTGGAC +
Preference number: 6 (lower is better)
Translates to: SLGPGVLSLVSC*SNRALLDTELD
Trigger: GTCCAACTCTGTATCTAGAAGTGCTCTGTTCGAGCAGCAGCTGACCAAGGAGAGCACCCCTGGGCCCAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS CCA 72 bp GGCCACTTCATCATGAGGGGCAGCATTGTTCCCACCTaGGCTGTGTTCAGAACCCAGGAGAAAGTGGTGGCT +
Preference number: 6 (lower is better)
Translates to: GHFIMRGSIVPT*AVFRTQEKVVA
Trigger: AGCCACCACTTTCTCCTGGGTTCTGAACACAGCCCAGGTGGGAACAATGCTGCCCCTCATGATGAAGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS CAA 90 bp GGGACAGGTAACCACAGCATGGTACTCAGCAAAACTGTTCGGGTCTaGAACAACTTCCTTGAGATCCTGGCAGAAGAGCTCGTAATCGTC +
Preference number: 6 (lower is better)
Translates to: GTGNHSMVLSKTVRV*NNFLEILAEELVIV
Trigger: GACGATTACGAGCTCTTCTGCCAGGATCTCAAGGAAGTTGTTCAAGACCCGAACAGTTTTGCTGAGTACCATGCTGTGGTTACCTGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS TCA 72 bp ACCACAGCATGGTACTCAGCAAAACTGTTCGGGTCTTaGACAACTTCCTTGAGATCCTGGCAGAAGAGCTCG +
Preference number: 6 (lower is better)
Translates to: TTAWYSAKLFGS*TTSLRSWQKSS
Trigger: CGAGCTCTTCTGCCAGGATCTCAAGGAAGTTGTTCAAGACCCGAACAGTTTTGCTGAGTACCATGCTGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS TCA 72 bp ACTCAGCAAAACTGTTCGGGTCTTGAACAACTTCCTTaGGATCCTGGCAGAAGAGCTCGTAATCGTCAGGCA +
Preference number: 6 (lower is better)
Translates to: TQQNCSGLEQLP*DPGRRARNRQA
Trigger: TGCCTGACGATTACGAGCTCTTCTGCCAGGATCTCAAGGAAGTTGTTCAAGACCCGAACAGTTTTGCTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5
CDS CAA 72 bp AACCACAGCATGGTACTCAGCAAAACTGTTCGGGTCTaGAACAACTTCCTTGAGATCCTGGCAGAAGAGCTC +
Preference number: 6 (lower is better)
Translates to: NHSMVLSKTVRV*NNFLEILAEEL
Trigger: GAGCTCTTCTGCCAGGATCTCAAGGAAGTTGTTCAAGACCCGAACAGTTTTGCTGAGTACCATGCTGTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328554.9
ENST00000405640.1
ENST00000407472.5