RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RTEL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000258366

Ensembl transcript IDs: ENST00000318100.9, ENST00000356810.5, ENST00000360203.11, ENST00000370003.2, ENST00000370018.7, ENST00000463361.1, ENST00000469728.5, ENST00000482936.6, ENST00000488316.1, ENST00000496816.5, ENST00000508582.7, ENST00000645309.1, ENST00000646389.1, ENST00000647249.1

Found 396 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTaGCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCC +
Preference number: 1 (lower is better)
Translates to: GPDPVPPQGPTMGPA*LRPAAGQAGWHGLA
Trigger: GGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
3UTR GCA 90 bp GGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTaGAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGG +
Preference number: 1 (lower is better)
Translates to: GPTAGTNHGPRLPEA*SGPSRLAWAGLFCW
Trigger: CCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
3UTR CCA 90 bp CGTTGCCAGCAGGCTTGGCAGCGCTGGAAGTCACAGGCAGGGCACTaGAAGGGCACCACGTCCTCTGCCCCACAGCCCTGGCACACACAG +
Preference number: 1 (lower is better)
Translates to: RCQQAWQRWKSQAGH*KGTTSSAPQPWHTQ
Trigger: CTGTGTGTGCCAGGGCTGTGGGGCAGAGGACGTGGTGCCCTTCCAGTGCCCTGCCTGTGACTTCCAGCGCTGCCAAGCCTGCTGGCAACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496816.5
3UTR-3UTR GCA 90 bp CCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGAAGCCACGTTGGGTGTaGTGGGGGCCTCCGTGGGCA +
Preference number: 2 (lower is better)
Translates to: PVPPQGPTMGPACLRPAAKPRWV*WGPPWA
Trigger: TGCCCACGGAGGCCCCCAGCACACCCAACGTGGCTT...CGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
3UTR-3UTR GCA 90 bp GGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTAAGCCACGTTGGGTGTaGTGGGGGCCTCCGTGGGCA +
Preference number: 2 (lower is better)
Translates to: GRPRSGPTAGTNHGPRLPKPRWV*WGPPWA
Trigger: TGCCCACGGAGGCCCCCAGCACACCCAACGTGGCTT...AGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
3UTR-3UTR GCA 90 bp TCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCAAGCCACGTTGGGTGTaGTGGGGGCCTCCGTGGGCA +
Preference number: 2 (lower is better)
Translates to: SGPTAGTNHGPRLPEACSKPRWV*WGPPWA
Trigger: TGCCCACGGAGGCCCCCAGCACACCCAACGTGGCTT...GCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
3UTR-3UTR CCA 90 bp CAGAGGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTCCACGTTGGGTGTGCTaGGGGCCTCCGTGGGCACTC +
Preference number: 2 (lower is better)
Translates to: QRQAQIRSHRRDQPWAPPPRWVC*GPPWAL
Trigger: GAGTGCCCACGGAGGCCCCCAGCACACCCAACGTGG...AGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCCTCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000370018.7
ENST00000496816.5
3UTR-3UTR GCA 90 bp GCGCTGGAAGTCACAGGCAGGGCACTGGAAGGGCACCACGTCCTCTGCCCCACAACCATGGGCCCCGCCTaGCTGAGGCCTGCAGCGGGC +
Preference number: 2 (lower is better)
Translates to: ALEVTGRALEGHHVLCPTTMGPA*LRPAAG
Trigger: GCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGT...TGTGGGGCAGAGGACGTGGTGCCCTTCCAGTGCCCTGCCTGTGACTTCCAGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496816.5
3UTR-3UTR CCA 90 bp CCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGCCAAGCCGGCTGGCATaGGCTGGCCTATTCTGTTGG +
Preference number: 2 (lower is better)
Translates to: PVPPQGPTMGPACLRPAAPSRLA*AGLFCW
Trigger: CCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGG...CGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
3UTR-3UTR CCA 90 bp AGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGTGGCGCCCGGAGCTCCCGTaGCCTGCTGCCCAGCGATGT +
Preference number: 2 (lower is better)
Translates to: RPAAGQAGWHGLAYSVGWRPELP*PAAQRC
Trigger: ACATCGCTGGGCAGCAGGCCACGGGAGCTCCGGGCG...CCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496816.5
3UTR-3UTR GCA 90 bp GGAGCCCTGTGGGTAAGCACAGGAGGCACGGCAAGCCTCTCCTCCTGGGGTCCCGGGGCTCAGCTGGGGTaGCCCTGTGGCACCACTCAC +
Preference number: 2 (lower is better)
Translates to: GALWVSTGGTASLSSWGPGAQLG*PCGTTH
Trigger: GTGAGTGGTGCCACAGGGGCACCCCAGCTGAGCCCC...GGGACCCCAGGAGGAGAGGCTTGCCGTGCCTCCTGTGCTTACCCACAGGGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000496816.5
3UTR-3UTR CCA 90 bp GATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCACCGGCTGGCATGGGCTaGCCTATTCTGTTGGGTGGG +
Preference number: 2 (lower is better)
Translates to: DPVPPQGPTMGPACLRPAPAGMG*PILLGG
Trigger: CCCACCCAACAGAATAGGCCAGCCCATGCCAGCCGG...TGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
3UTR-3UTR GCA 90 bp AGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGTGGAAGCCACGTTGGGTGTaGTGGGGGCCTCCGTGGGCA +
Preference number: 2 (lower is better)
Translates to: RPAAGQAGWHGLAYSVGWKPRWV*WGPPWA
Trigger: TGCCCACGGAGGCCCCCAGCACACCCAACGTGGCTT...CCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
3UTR-3UTR CCA 90 bp AGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGTGGGCGGGCCAAGCCGGCTaGCATGGGCTGGCCTATTCT +
Preference number: 2 (lower is better)
Translates to: RPAAGQAGWHGLAYSVGWAGQAG*HGLAYS
Trigger: AGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGC...CCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
3UTR-3UTR CCA 90 bp AGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGGGGTGAGGGGCTCAGCTaGGGTGCCCCTGTGGCACCA +
Preference number: 2 (lower is better)
Translates to: SWGAPVAPLTGQEPGKFWGEGLS*GAPVAP
Trigger: TGGTGCCACAGGGGCACCCCAGCTGAGCCCCTCACC...CCAGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
3UTR-3UTR CCA 90 bp TCAGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTCCACGTTGGGTGTGCTaGGGGCCTCCGTGGGCACTC +
Preference number: 2 (lower is better)
Translates to: SAGVPLWHHSQARSQGSSPRWVC*GPPWAL
Trigger: GAGTGCCCACGGAGGCCCCCAGCACACCCAACGTGG...AGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000370018.7
ENST00000496816.5
3UTR CAA 90 bp GGCTGGGCACATCCTAGAGGCCTGAAGGTGCCGTTGCCAGCAGGCTaGGCAGCGCTGGAAGTCACAGGCAGGGCACTGGAAGGGCACCAC +
Preference number: 2 (lower is better)
Translates to: GWAHPRGLKVPLPAG*AALEVTGRALEGHH
Trigger: GTGGTGCCCTTCCAGTGCCCTGCCTGTGACTTCCAGCGCTGCCAAGCCTGCTGGCAACGGCACCTTCAGGCCTCTAGGATGTGCCCAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496816.5
3UTR-3UTR GCA 90 bp GGAGCCCTGTGGGTAAGCACAGGAGGCACGGCAAGCCTCTCCTCCTGGGGTCCCGAAGTCCTCTGGCTTTaGAGTGGTCAGGGCGGCCAA +
Preference number: 2 (lower is better)
Translates to: GALWVSTGGTASLSSWGPEVLWL*SGQGGQ
Trigger: TTGGCCGCCCTGACCACTGCAAAGCCAGAGGACTTC...GGGACCCCAGGAGGAGAGGCTTGCCGTGCCTCCTGTGCTTACCCACAGGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496816.5
3UTR-3UTR CCA 90 bp TCAGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTCCGGCTGGCATGGGCTaGCCTATTCTGTTGGGTGGG +
Preference number: 2 (lower is better)
Translates to: SAGVPLWHHSQARSQGSSPAGMG*PILLGG
Trigger: CCCACCCAACAGAATAGGCCAGCCCATGCCAGCCGG...AGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
3UTR-3UTR CCA 90 bp AGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGGCCAAGCCGGCTGGCATaGGCTGGCCTATTCTGTTGG +
Preference number: 2 (lower is better)
Translates to: SWGAPVAPLTGQEPGKFWPSRLA*AGLFCW
Trigger: CCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGG...CCAGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
3UTR-3UTR CCA 90 bp CAGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGCCAAGCCGGCTGGCATaGGCTGGCCTATTCTGTTGG +
Preference number: 2 (lower is better)
Translates to: QLGCPCGTTHRPGAREVLPSRLA*AGLFCW
Trigger: CCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGG...CAGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
3UTR-3UTR TCA 90 bp AGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGGGAGAGCCCTGTCCCCTaGTTAAAAGTGGACACGTGC +
Preference number: 2 (lower is better)
Translates to: SWGAPVAPLTGQEPGKFWESPVP*LKVDTC
Trigger: GCACGTGTCCACTTTTAATCAGGGGACAGGGCTCTC...CCAGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
3UTR-3UTR GCA 90 bp GGCACTGCCAGCAGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACACCATGGGCCCCGCCTaGCTGAGGCCTGCAGCGGGC +
Preference number: 2 (lower is better)
Translates to: GTASSFIREPCPLIKSGHTMGPA*LRPAAG
Trigger: GCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGT...GTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCTGCTGGCAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
3UTR-3UTR GCA 90 bp AGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGGAACATGCTGAACCTGTaGAGCAGGGGGAAGTCCTCT +
Preference number: 2 (lower is better)
Translates to: SWGAPVAPLTGQEPGKFWNMLNL*SRGKSS
Trigger: AGAGGACTTCCCCCTGCTGCACAGGTTCAGCATGTT...CCAGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000496816.5
3UTR-3UTR GCA 90 bp ACTGCCAGCAGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACGTGCGCCTGCCTGAGGCCTaGAGCGGGCCAAGCCGGCTG +
Preference number: 2 (lower is better)
Translates to: TASSFIREPCPLIKSGHVRLPEA*SGPSRL
Trigger: CAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCG...CACGTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCTGCTGGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
3UTR-3UTR GCA 90 bp ACTGCCAGCAGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACGTGACCATGGGCCCCGCCTaGCTGAGGCCTGCAGCGGGC +
Preference number: 2 (lower is better)
Translates to: TASSFIREPCPLIKSGHVTMGPA*LRPAAG
Trigger: GCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGT...CACGTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCTGCTGGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
3UTR-3UTR GCA 90 bp ACCGTCCTGGGCACTGCCAGCAGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAGGGGCTCAGCTGGGGTaGCCCTGTGGCACCACTCAC +
Preference number: 2 (lower is better)
Translates to: TVLGTASSFIREPCPLIKGAQLG*PCGTTH
Trigger: GTGAGTGGTGCCACAGGGGCACCCCAGCTGAGCCCC...TTTAATCAGGGGACAGGGCTCTCTAATAAAGCTGCTGGCAGTGCCCAGGACGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370018.7
3UTR-3UTR CCA 90 bp GGCACTGCCAGCAGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACCCACGTTGGGTGTGCTaGGGGCCTCCGTGGGCACTC +
Preference number: 2 (lower is better)
Translates to: GTASSFIREPCPLIKSGHPRWVC*GPPWAL
Trigger: GAGTGCCCACGGAGGCCCCCAGCACACCCAACGTGG...GTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCTGCTGGCAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000370018.7
ENST00000496816.5
3UTR-3UTR CCA 90 bp GGCACTGCCAGCAGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACAGCGCTGCCAAGAGTTaGCTACAGCCCGCGGACCCC +
Preference number: 2 (lower is better)
Translates to: GTASSFIREPCPLIKSGHSAAKS*LQPADP
Trigger: GGGGTCCGCGGGCTGTAGCCAACTCTTGGCAGCGCT...GTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCTGCTGGCAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496816.5
3UTR-3UTR CCA 90 bp GGCACTGCCAGCAGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACCCAAGCCGGCTGGCATaGGCTGGCCTATTCTGTTGG +
Preference number: 2 (lower is better)
Translates to: GTASSFIREPCPLIKSGHPSRLA*AGLFCW
Trigger: CCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGG...GTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCTGCTGGCAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
3UTR-3UTR CCA 90 bp GGCACTGCCAGCAGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACCCCCACAGTCCCTGCTaGCCTCTGTCTAAGGAAGGA +
Preference number: 2 (lower is better)
Translates to: GTASSFIREPCPLIKSGHPHSPC*PLSKEG
Trigger: TCCTTCCTTAGACAGAGGCCAGCAGGGACTGTGGGG...GTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCTGCTGGCAGTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000496816.5
3UTR GCA 72 bp CCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTaGCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCAT +
Preference number: 3 (lower is better)
Translates to: PVPPQGPTMGPA*LRPAAGQAGWH
Trigger: ATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
3UTR GCA 72 bp GCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTaGAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTA +
Preference number: 3 (lower is better)
Translates to: AGTNHGPRLPEA*SGPSRLAWAGL
Trigger: TAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
3UTR CCA 72 bp ATGCTGCAGGCCCGTGGGGAGGTCCTGAGGACTGGCTaGGACCTGCATCCTCACCGCCCGCCCCCACAGTCC +
Preference number: 3 (lower is better)
Translates to: MLQARGEVLRTG*DLHPHRPPPQS
Trigger: GGACTGTGGGGGCGGGCGGTGAGGATGCAGGTCCCAGCCAGTCCTCAGGACCTCCCCACGGGCCTGCAGCAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496816.5
3UTR CCA 72 bp CACAGCCTGCTGAGAGGGGCCCGCCCGGAGCTCCCGTaGCCTGCTGCCCAGCGATGTCTCTCCCATGAGGCT +
Preference number: 3 (lower is better)
Translates to: HSLLRGARPELP*PAAQRCLSHEA
Trigger: AGCCTCATGGGAGAGACATCGCTGGGCAGCAGGCCACGGGAGCTCCGGGCGGGCCCCTCTCAGCAGGCTGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496816.5
3UTR-3UTR CAA 90 bp CTCAGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGCCAGGGTCTCCTGTaGGGGGTGGCCTGGGCGACA +
Preference number: 3 (lower is better)
Translates to: LSWGAPVAPLTGQEPGKFCQGLL*GVAWAT
Trigger: TGTCGCCCAGGCCACCCCCAACAGGAGACCCTGGCA...GAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCTGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000496816.5
CDS-3UTR TCA 90 bp GGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTGGGCCCCGCCTGCCTaGGGCCTGCAGCGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: GPACLRPAAGQAGWHGLAWAPPA*GLQRAK
Trigger: CTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCA...GGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp GGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCGAGCAGCTGTGGGCCTaGTCCTCGCCAGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: GPACLRPAAGQAGWHGLAEQLWA*SSPGLP
Trigger: GGGGAGCCCTGGCGAGGAGCAGGCCCACAGCTGCTC...GGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp GGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCCTCCTGGGGTCCCGGTaGCTCCATGCCCGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: GPACLRPAAGQAGWHGLALLGSR*LHARVG
Trigger: CCCTACCCGGGCATGGAGCCACCGGGACCCCAGGAG...GGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR TCA 90 bp GGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCGGTCTTCTCGGACCGTaGGGGGCCTGGTTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: GPACLRPAAGQAGWHGLAGLLGP*GAWLGS
Trigger: GCTCCCCAACCAGGCCCCTCACGGTCCGAGAAGACC...GGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp GGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCCCACGCGGGCGATGTTaGCCAGAGCCTTCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GPACLRPAAGQAGWHGLAPRGRC*PEPSPG
Trigger: CCCTGGGGAAGGCTCTGGGCAACATCGCCCGCGTGG...GGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp GGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCGCCCTGGACGCCTGCTaGCGGTACCACTCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: GPACLRPAAGQAGWHGLAALDAC*RYHSCP
Trigger: TGGGCAGGAGTGGTACCGGCAGCAGGCGTCCAGGGC...GGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp ATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGCGCCTGCCTGAGGCCTaGAGCGGGCCAAGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: MGPACLRPAAGQAGWHGLRLPEA*SGPSRL
Trigger: CAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCG...CAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCAT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp GGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCGGGGCTCAGCTGGGGTaGCCCTGTGGCACCACTCAC +
Preference number: 4 (lower is better)
Translates to: GPACLRPAAGQAGWHGLAGAQLG*PCGTTH
Trigger: GTGAGTGGTGCCACAGGGGCACCCCAGCTGAGCCCC...GGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp GGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCCCACGTTGGGTGTGCTaGGGGCCTCCGTGGGCACTC +
Preference number: 4 (lower is better)
Translates to: GPACLRPAAGQAGWHGLAPRWVC*GPPWAL
Trigger: GAGTGCCCACGGAGGCCCCCAGCACACCCAACGTGG...GGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR TCA 90 bp GATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCATGGGCCCCGCCTGCCTaGGGCCTGCAGCGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: DPVPPQGPTMGPACLRPAWAPPA*GLQRAK
Trigger: CTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCA...TGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp GGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCGTCCAGGACCGGCTGTaGCCGCTGCCTTCGGGGAAT +
Preference number: 4 (lower is better)
Translates to: GPACLRPAAGQAGWHGLAVQDRL*PLPSGN
Trigger: ATTCCCCGAAGGCAGCGGGCACAGCCGGTCCTGGAC...GGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp GGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCGGAGCTCCCGTGGCCTaGTGCCCAGCGATGTCTCTC +
Preference number: 4 (lower is better)
Translates to: GPACLRPAAGQAGWHGLAGAPVA*CPAMSL
Trigger: GAGAGACATCGCTGGGCAGCAGGCCACGGGAGCTCC...GGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360203.11
ENST00000496816.5
CDS-3UTR CCA 90 bp GGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGAGTCCAGCCCCTCGCTaGCCTTGCCCCGGCAGACCG +
Preference number: 4 (lower is better)
Translates to: GTNHGPRLPEACSGPSRLSPAPR*PCPGRP
Trigger: CGGTCTGCCGGGGCAAGGCCAGCGAGGGGCTGGACT...CAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CCA 90 bp CCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGCTCCTGGGGTCCCGGTaGCTCCATGCCCGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: PVPPQGPTMGPACLRPAALLGSR*LHARVG
Trigger: CCCTACCCGGGCATGGAGCCACCGGGACCCCAGGAG...CGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR TCA 90 bp GGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCAGCGTTGCCCCAGGATaGCAAGGCCCGATCCGGGAA +
Preference number: 4 (lower is better)
Translates to: GPACLRPAAGQAGWHGLASVAPG*QGPIRE
Trigger: TTCCCGGATCGGGCCTTGTCATCCTGGGGCAACGCT...GGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR TCA 90 bp CCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGTCTTCTCGGACCGTaGGGGGCCTGGTTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: PVPPQGPTMGPACLRPAAGLLGP*GAWLGS
Trigger: GCTCCCCAACCAGGCCCCTCACGGTCCGAGAAGACC...CGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR TCA 90 bp CAGAGGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCACACACAGCCTGCTaGGAGGGGCCCGCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: QRQAQIRSHRRDQPWAPPAHTAC*EGPARS
Trigger: GCTCCGGGCGGGCCCCTCTCAGCAGGCTGTGTGTGC...AGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCCTCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360203.11
ENST00000496816.5
CDS-3UTR GCA 90 bp GGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTGCCGGTACCACTCCTaGCCAGAGAGGAACTGGCCC +
Preference number: 4 (lower is better)
Translates to: GPACLRPAAGQAGWHGLACRYHS*PERNWP
Trigger: GGGCCAGTTCCTCTCTGGGCAGGAGTGGTACCGGCA...GGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp GGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCCCTGGACGCCTGCTaGCGGTACCACTCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: GTNHGPRLPEACSGPSRLALDAC*RYHSCP
Trigger: TGGGCAGGAGTGGTACCGGCAGCAGGCGTCCAGGGC...CAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp GGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGCAGCTGTGGGCCTaGTCCTCGCCAGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: GRPRSGPTAGTNHGPRLPEQLWA*SSPGLP
Trigger: GGGGAGCCCTGGCGAGGAGCAGGCCCACAGCTGCTC...AGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp GAGGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCGGACCCCAGGGCCCTaGGGGCATCAGCCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: EAGPDPVPPQGPTMGPACRTPGP*GHQPGR
Trigger: CCTACCTGGCTGATGCCCGCAGGGCCCTGGGGTCCG...GCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp CCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGGGCTCAGCTGGGGTaGCCCTGTGGCACCACTCAC +
Preference number: 4 (lower is better)
Translates to: PVPPQGPTMGPACLRPAAGAQLG*PCGTTH
Trigger: GTGAGTGGTGCCACAGGGGCACCCCAGCTGAGCCCC...CGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp GAGGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTCCTGGGGTCCCGGTaGCTCCATGCCCGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: EAGPDPVPPQGPTMGPACLLGSR*LHARVG
Trigger: CCCTACCCGGGCATGGAGCCACCGGGACCCCAGGAG...GCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp GGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCCCGGCTGGCATGGGCTaGCCTATTCTGTTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GPACLRPAAGQAGWHGLAPAGMG*PILLGG
Trigger: CCCACCCAACAGAATAGGCCAGCCCATGCCAGCCGG...GGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp CCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGCTGGGGTGCCCCTGTaGCACCACTCACAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PVPPQGPTMGPACLRPAAAGVPL*HHSQAR
Trigger: CCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGC...CGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp CCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGTGAGGGGCTCAGCTaGGGTGCCCCTGTGGCACCA +
Preference number: 4 (lower is better)
Translates to: PQGPTMGPACLRPAAGQAGEGLS*GAPVAP
Trigger: TGGTGCCACAGGGGCACCCCAGCTGAGCCCCTCACC...GGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR TCA 90 bp GGAGCCCTGTGGGTAAGCACAGGAGGCACGGCAAGCCTCTCCTCCTGGGGTCCCTGGGCCCCGCCTGCCTaGGGCCTGCAGCGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: GALWVSTGGTASLSSWGPWAPPA*GLQRAK
Trigger: CTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCA...GGGACCCCAGGAGGAGAGGCTTGCCGTGCCTCCTGTGCTTACCCACAGGGCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496816.5
CDS-3UTR GCA 90 bp GGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCCCCTCTCGGCAATCTTaGGGGCAGAGATGCCGTCTC +
Preference number: 4 (lower is better)
Translates to: GPACLRPAAGQAGWHGLAPSRQS*GQRCRL
Trigger: GAGACGGCATCTCTGCCCGCAAGATTGCCGAGAGGG...GGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp ATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGTCCAGGACCGGCTGTaGCCGCTGCCTTCGGGGAAT +
Preference number: 4 (lower is better)
Translates to: MGPACLRPAAGQAGWHGLVQDRL*PLPSGN
Trigger: ATTCCCCGAAGGCAGCGGGCACAGCCGGTCCTGGAC...CAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp CCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGTCCAGGACCGGCTGTaGCCGCTGCCTTCGGGGAAT +
Preference number: 4 (lower is better)
Translates to: PVPPQGPTMGPACLRPAAVQDRL*PLPSGN
Trigger: ATTCCCCGAAGGCAGCGGGCACAGCCGGTCCTGGAC...CGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp GGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGTCCAGGACCGGCTGTaGCCGCTGCCTTCGGGGAAT +
Preference number: 4 (lower is better)
Translates to: GTNHGPRLPEACSGPSRLVQDRL*PLPSGN
Trigger: ATTCCCCGAAGGCAGCGGGCACAGCCGGTCCTGGAC...CAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp GATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGGACTGGCTGGGACCTaGATCCTCACCGCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: DPVPPQGPTMGPACLRPAGLAGT*ILTARP
Trigger: GGGGCGGGCGGTGAGGATGCAGGTCCCAGCCAGTCC...TGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp CCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCAAGCCACGTTGGGTGTaGTGGGGGCCTCCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: PQGPTMGPACLRPAAGQAKPRWV*WGPPWA
Trigger: TGCCCACGGAGGCCCCCAGCACACCCAACGTGGCTT...GGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp GGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGGGGCTCAGCTGGGGTaGCCCTGTGGCACCACTCAC +
Preference number: 4 (lower is better)
Translates to: GRPRSGPTAGTNHGPRLPGAQLG*PCGTTH
Trigger: GTGAGTGGTGCCACAGGGGCACCCCAGCTGAGCCCC...AGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp ATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGCATTGCCCGGAGAGCTaGACGGGCCTCCTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: MGPACLRPAAGQAGWHGLHCPES*TGLLPR
Trigger: TCTGGGGAGGAGGCCCGTGCAGCTCTCCGGGCAATG...CAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370018.7
CDS-3UTR CCA 90 bp TCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCAGGGAGCGGACGCCCTaGCGGACCAGCTCGTGCATG +
Preference number: 4 (lower is better)
Translates to: SGPTAGTNHGPRLPEACSRERTP*RTSSCM
Trigger: CATGCACGAGCTGGTCCGCCAGGGCGTCCGCTCCCT...GCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CCA 90 bp GGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTAGGGTGGAGCAGCTGTaGGCCTGCTCCTCGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GRPRSGPTAGTNHGPRLPRVEQL*ACSSPG
Trigger: CCCTGGCGAGGAGCAGGCCCACAGCTGCTCCACCCT...AGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp TCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCAGGGTGGAGCAGCTGTaGGCCTGCTCCTCGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SGPTAGTNHGPRLPEACSRVEQL*ACSSPG
Trigger: CCCTGGCGAGGAGCAGGCCCACAGCTGCTCCACCCT...GCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp GGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCGCCGTTCTTCCAGTaGGGTCCAGGACCGGCTGTG +
Preference number: 4 (lower is better)
Translates to: GTNHGPRLPEACSGPSRLAPFFQ*GPGPAV
Trigger: CACAGCCGGTCCTGGACCCCACTGGAAGAACGGCGC...CAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CCA 90 bp CCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGAGCGCTGCCAAGAGTTaGCTACAGCCCGCGGACCCC +
Preference number: 4 (lower is better)
Translates to: PVPPQGPTMGPACLRPAASAAKS*LQPADP
Trigger: GGGGTCCGCGGGCTGTAGCCAACTCTTGGCAGCGCT...CGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp GGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCCCAAGCCGGCTGGCATaGGCTGGCCTATTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: GPACLRPAAGQAGWHGLAPSRLA*AGLFCW
Trigger: CCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGG...GGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp GGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCGGGCCAAGCCGGCTaGCATGGGCTGGCCTATTCT +
Preference number: 4 (lower is better)
Translates to: GTNHGPRLPEACSGPSRLAGQAG*HGLAYS
Trigger: AGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGC...CAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp GGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGCTGGGGTGCCCCTGTaGCACCACTCACAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GRPRSGPTAGTNHGPRLPAGVPL*HHSQAR
Trigger: CCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGC...AGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp TCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGTGAGGGGCTCAGCTaGGGTGCCCCTGTGGCACCA +
Preference number: 4 (lower is better)
Translates to: SGPTAGTNHGPRLPEACSGEGLS*GAPVAP
Trigger: TGGTGCCACAGGGGCACCCCAGCTGAGCCCCTCACC...GCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp CAGAGGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTCTCACTGTCCCGCAGTaGTCCCGGCGGGCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: QRQAQIRSHRRDQPWAPPLTVPQ*SRRASL
Trigger: CAGGGAGGCCCGCCGGGACCACTGCGGGACAGTGAG...AGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCCTCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370018.7
CDS-3UTR TCA 90 bp CCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGGTCTTCTCGGACCGTaGGGGGCCTGGTTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: PDPVPPQGPTMGPACLRPGLLGP*GAWLGS
Trigger: GCTCCCCAACCAGGCCCCTCACGGTCCGAGAAGACC...AGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR TCA 90 bp AGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGGTGGGCCCCGCCTGCCTaGGGCCTGCAGCGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: SWGAPVAPLTGQEPGKFWWAPPA*GLQRAK
Trigger: CTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCA...CCAGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR TCA 90 bp AGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGTGGGCGCGCAGTCGGCGCTaGGCCCACTGCACTTCCGCC +
Preference number: 4 (lower is better)
Translates to: RPAAGQAGWHGLAYSVGWARSRR*AHCTSA
Trigger: GGCGGAAGTGCAGTGGGCTCAGCGCCGACTGCGCGC...CCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370018.7
CDS-3UTR GCA 90 bp GGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGTGCCGGTACCACTCCTaGCCAGAGAGGAACTGGCCC +
Preference number: 4 (lower is better)
Translates to: GTNHGPRLPEACSGPSRLCRYHS*PERNWP
Trigger: GGGCCAGTTCCTCTCTGGGCAGGAGTGGTACCGGCA...CAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp CAGAGGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCCTGGACGCCTGCTaGCGGTACCACTCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: QRQAQIRSHRRDQPWAPPALDAC*RYHSCP
Trigger: TGGGCAGGAGTGGTACCGGCAGCAGGCGTCCAGGGC...AGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCCTCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp GAGGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCACAGCCCTGGACGCCTaGTGCCGGTACCACTCCTGC +
Preference number: 4 (lower is better)
Translates to: EAGPDPVPPQGPTMGPACTALDA*CRYHSC
Trigger: GCAGGAGTGGTACCGGCAGCAGGCGTCCAGGGCTGT...GCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp GCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGTGGGTCGCCTGCCTGAGGCCTaGAGCGGGCCAAGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: ACSGPSRLAWAGLFCWVGRLPEA*SGPSRL
Trigger: CAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCG...ACCCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp AGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGTGGACCATGGGCCCCGCCTaGCTGAGGCCTGCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: RPAAGQAGWHGLAYSVGWTMGPA*LRPAAG
Trigger: GCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGT...CCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp GCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGTGGGTACCATGGGCCCCGCCTaGCTGAGGCCTGCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: ACSGPSRLAWAGLFCWVGTMGPA*LRPAAG
Trigger: GCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGT...ACCCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp TCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCAGCGCTGCCAAGAGTTaGCTACAGCCCGCGGACCCC +
Preference number: 4 (lower is better)
Translates to: SGPTAGTNHGPRLPEACSSAAKS*LQPADP
Trigger: GGGGTCCGCGGGCTGTAGCCAACTCTTGGCAGCGCT...GCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp GAGGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCGATGCTGCAGGCCCGTaGGGAGGTCCTGAGGACTGG +
Preference number: 4 (lower is better)
Translates to: EAGPDPVPPQGPTMGPACDAAGP*GGPEDW
Trigger: CCAGTCCTCAGGACCTCCCCACGGGCCTGCAGCATC...GCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR TCA 90 bp GGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATGACGTCCAGTCCTaGAGCCAGGTCATGGGGAGT +
Preference number: 4 (lower is better)
Translates to: GPACLRPAAGQAGWHGLAYDVQS*SQVMGS
Trigger: ACTCCCCATGACCTGGCTTCAGGACTGGACGTCATA...GGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR TCA 90 bp GGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGGTACGGGAGGCCCGTaGCAATCACACCACGGCCAT +
Preference number: 4 (lower is better)
Translates to: GRPRSGPTAGTNHGPRLPGTGGP*QSHHGH
Trigger: ATGGCCGTGGTGTGATTGTCACGGGCCTCCCGTACC...AGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR TCA 90 bp TCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGTACGGGAGGCCCGTaGCAATCACACCACGGCCAT +
Preference number: 4 (lower is better)
Translates to: SGPTAGTNHGPRLPEACSGTGGP*QSHHGH
Trigger: ATGGCCGTGGTGTGATTGTCACGGGCCTCCCGTACC...GCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR TCA 90 bp GGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGCCAGGAACTGCATCTTaGGGACAACCCGGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: GTNHGPRLPEACSGPSRLPGTAS*GQPGGP
Trigger: TGGACCCCCGGGTTGTCCTCAAGATGCAGTTCCTGG...CAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR TCA 90 bp GGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCGACTTGGCCTCGCTaGCAGCATCTTCTCCACGCA +
Preference number: 4 (lower is better)
Translates to: GTNHGPRLPEACSGPSRLATWPR*QHLLHA
Trigger: TGCGTGGAGAAGATGCTGTCAGCGAGGCCAAGTCGC...CAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp GATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCATGGCGGACCAGCTCGTaGATGCTGTGGCCGGGACTG +
Preference number: 4 (lower is better)
Translates to: DPVPPQGPTMGPACLRPAWRTSS*MLWPGL
Trigger: CAGTCCCGGCCACAGCATGCACGAGCTGGTCCGCCA...TGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp AGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGGGCCCCTCGCTGGCCTTaGCCCGGCAGACCGCCAGGA +
Preference number: 4 (lower is better)
Translates to: SWGAPVAPLTGQEPGKFWAPRWP*PGRPPG
Trigger: TCCTGGCGGTCTGCCGGGGCAAGGCCAGCGAGGGGC...CCAGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp CAGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGGCCCCTCGCTGGCCTTaGCCCGGCAGACCGCCAGGA +
Preference number: 4 (lower is better)
Translates to: QLGCPCGTTHRPGAREVLAPRWP*PGRPPG
Trigger: TCCTGGCGGTCTGCCGGGGCAAGGCCAGCGAGGGGC...CAGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp TCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCTGCCGGTACCACTCCTaGCCAGAGAGGAACTGGCCC +
Preference number: 4 (lower is better)
Translates to: SGPTAGTNHGPRLPEACSCRYHS*PERNWP
Trigger: GGGCCAGTTCCTCTCTGGGCAGGAGTGGTACCGGCA...GCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp GATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAACAGCCCTGGACGCCTaGTGCCGGTACCACTCCTGC +
Preference number: 4 (lower is better)
Translates to: DPVPPQGPTMGPACLRPATALDA*CRYHSC
Trigger: GCAGGAGTGGTACCGGCAGCAGGCGTCCAGGGCTGT...TGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp GCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGTGGGTGAGCAGCTGTGGGCCTaGTCCTCGCCAGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: ACSGPSRLAWAGLFCWVGEQLWA*SSPGLP
Trigger: GGGGAGCCCTGGCGAGGAGCAGGCCCACAGCTGCTC...ACCCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp GGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCTGCCTTCGGGGAATaGTGTGCTCAGGCCGATAGC +
Preference number: 4 (lower is better)
Translates to: GTNHGPRLPEACSGPSRLAAFGE*CAQADS
Trigger: GCTATCGGCCTGAGCACAGCATTCCCCGAAGGCAGC...CAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp CTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGCGGACCCCAGGGCCCTaGGGGCATCAGCCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: LRPAAGQAGWHGLAYSVGRTPGP*GHQPGR
Trigger: CCTACCTGGCTGATGCCCGCAGGGCCCTGGGGTCCG...CCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp CTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTCGGACCCCAGGGCCCTaGGGGCATCAGCCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: LPEACSGPSRLAWAGLFCRTPGP*GHQPGR
Trigger: CCTACCTGGCTGATGCCCGCAGGGCCCTGGGGTCCG...ACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp GGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGGCCGGTCAGGTCTGTaGACGTCTGTGAGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: GTNHGPRLPEACSGPSRLGRSGL*TSVRSA
Trigger: AGCGCTTCTCACAGACGTGCACAGACCTGACCGGCC...CAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp CCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCCGGTCAGGTCTGTaGACGTCTGTGAGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: PQGPTMGPACLRPAAGQAGRSGL*TSVRSA
Trigger: AGCGCTTCTCACAGACGTGCACAGACCTGACCGGCC...GGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp GCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGTGGGTGGACTGGCTGGGACCTaGATCCTCACCGCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: ACSGPSRLAWAGLFCWVGGLAGT*ILTARP
Trigger: GGGGCGGGCGGTGAGGATGCAGGTCCCAGCCAGTCC...ACCCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp AGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGTGGGGACTGGCTGGGACCTaGATCCTCACCGCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: RPAAGQAGWHGLAYSVGWGLAGT*ILTARP
Trigger: GGGGCGGGCGGTGAGGATGCAGGTCCCAGCCAGTCC...CCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp CCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTAAGCCACGTTGGGTGTaGTGGGGGCCTCCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: PDPVPPQGPTMGPACLRPKPRWV*WGPPWA
Trigger: TGCCCACGGAGGCCCCCAGCACACCCAACGTGGCTT...AGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp CAGAGGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTAAGCCACGTTGGGTGTaGTGGGGGCCTCCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: QRQAQIRSHRRDQPWAPPKPRWV*WGPPWA
Trigger: TGCCCACGGAGGCCCCCAGCACACCCAACGTGGCTT...AGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCCTCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp AGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGGACCATGGGCCCCGCCTaGCTGAGGCCTGCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: SWGAPVAPLTGQEPGKFWTMGPA*LRPAAG
Trigger: GCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGT...CCAGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp CCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGCCCTATGGCACAGACTaGTCACTTGTCTCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: PVPPQGPTMGPACLRPAAPYGTD*SLVSAA
Trigger: CGCCGCGGAGACAAGTGAGCAGTCTGTGCCATAGGG...CGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CCA 90 bp CCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTCTCCATGTTCAGCCCTaGGCTGGGGGAGTCCGCGCT +
Preference number: 4 (lower is better)
Translates to: PDPVPPQGPTMGPACLRPLHVQP*AGGVRA
Trigger: AGCGCGGACTCCCCCAGCCCAGGGCTGAACATGGAG...AGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CCA 90 bp CTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGAGTCCAGCCCCTCGCTaGCCTTGCCCCGGCAGACCG +
Preference number: 4 (lower is better)
Translates to: LRPAAGQAGWHGLAYSVGSPAPR*PCPGRP
Trigger: CGGTCTGCCGGGGCAAGGCCAGCGAGGGGCTGGACT...CCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CCA 90 bp CTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTAGTCCAGCCCCTCGCTaGCCTTGCCCCGGCAGACCG +
Preference number: 4 (lower is better)
Translates to: LPEACSGPSRLAWAGLFCSPAPR*PCPGRP
Trigger: CGGTCTGCCGGGGCAAGGCCAGCGAGGGGCTGGACT...ACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CCA 90 bp CCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTAGCGCTGCCAAGAGTTaGCTACAGCCCGCGGACCCC +
Preference number: 4 (lower is better)
Translates to: PDPVPPQGPTMGPACLRPSAAKS*LQPADP
Trigger: GGGGTCCGCGGGCTGTAGCCAACTCTTGGCAGCGCT...AGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp CTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTCTCCTGGGGTCCCGGTaGCTCCATGCCCGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: LPEACSGPSRLAWAGLFCLLGSR*LHARVG
Trigger: CCCTACCCGGGCATGGAGCCACCGGGACCCCAGGAG...ACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp GGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGTCCTGAGGACTGGCTaGGACCTGCATCCTCACCGC +
Preference number: 4 (lower is better)
Translates to: GRPRSGPTAGTNHGPRLPVLRTG*DLHPHR
Trigger: GCGGTGAGGATGCAGGTCCCAGCCAGTCCTCAGGAC...AGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp ATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGGAGGTCCTGAGGACTaGCTGGGACCTGCATCCTCA +
Preference number: 4 (lower is better)
Translates to: MGPACLRPAAGQAGWHGLGGPED*LGPASS
Trigger: TGAGGATGCAGGTCCCAGCCAGTCCTCAGGACCTCC...CAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp GATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGATGCTGCAGGCCCGTaGGGAGGTCCTGAGGACTGG +
Preference number: 4 (lower is better)
Translates to: DPVPPQGPTMGPACLRPADAAGP*GGPEDW
Trigger: CCAGTCCTCAGGACCTCCCCACGGGCCTGCAGCATC...TGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp CAGAGGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGATGCTGCAGGCCCGTaGGGAGGTCCTGAGGACTGG +
Preference number: 4 (lower is better)
Translates to: QRQAQIRSHRRDQPWAPPDAAGP*GGPEDW
Trigger: CCAGTCCTCAGGACCTCCCCACGGGCCTGCAGCATC...AGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCCTCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp CCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCTTCCTGGAGGCGGTGTaGCAGGCTGGGCACATCCTA +
Preference number: 4 (lower is better)
Translates to: PQGPTMGPACLRPAAGQAFLEAV*QAGHIL
Trigger: TAGGATGTGCCCAGCCTGCCACACCGCCTCCAGGAA...GGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp TCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCCCGGCTGGCATGGGCTaGCCTATTCTGTTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: SGPTAGTNHGPRLPEACSPAGMG*PILLGG
Trigger: CCCACCCAACAGAATAGGCCAGCCCATGCCAGCCGG...GCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp GCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGTGGGTCGCCCGGAGCTCCCGTaGCCTGCTGCCCAGCGATGT +
Preference number: 4 (lower is better)
Translates to: ACSGPSRLAWAGLFCWVGRPELP*PAAQRC
Trigger: ACATCGCTGGGCAGCAGGCCACGGGAGCTCCGGGCG...ACCCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360203.11
ENST00000496816.5
CDS-3UTR CCA 90 bp TCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCCAGGCTTGGCAGCGCTaGAAGTCACAGGCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: SGPTAGTNHGPRLPEACSQAWQR*KSQAGH
Trigger: GTGCCCTGCCTGTGACTTCCAGCGCTGCCAAGCCTG...GCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360203.11
ENST00000496816.5
CDS-3UTR TCA 90 bp GGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTCTGCCAGGTGCTGGATaGTCTGGTCCAGCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: GRPRSGPTAGTNHGPRLPLPGAG*SGPASP
Trigger: TGGACTCGCTGGACCAGATCATCCAGCACCTGGCAG...AGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR TCA 90 bp CCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGGTACGGGAGGCCCGTaGCAATCACACCACGGCCAT +
Preference number: 4 (lower is better)
Translates to: PDPVPPQGPTMGPACLRPGTGGP*QSHHGH
Trigger: ATGGCCGTGGTGTGATTGTCACGGGCCTCCCGTACC...AGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR TCA 90 bp GAGGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCGCGACTTGGCCTCGCTaGCAGCATCTTCTCCACGCA +
Preference number: 4 (lower is better)
Translates to: EAGPDPVPPQGPTMGPACATWPR*QHLLHA
Trigger: TGCGTGGAGAAGATGCTGTCAGCGAGGCCAAGTCGC...GCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp TCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCCCCTCTCGGCAATCTTaGGGGCAGAGATGCCGTCTC +
Preference number: 4 (lower is better)
Translates to: SGPTAGTNHGPRLPEACSPSRQS*GQRCRL
Trigger: GAGACGGCATCTCTGCCCGCAAGATTGCCGAGAGGG...GCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp GCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGTGGGTCCACGCGGGCGATGTTaGCCAGAGCCTTCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: ACSGPSRLAWAGLFCWVGPRGRC*PEPSPG
Trigger: CCCTGGGGAAGGCTCTGGGCAACATCGCCCGCGTGG...ACCCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp GAGGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCGGGCAGTTGGGCTCTTaGGTCGGCAAAGGCGAACCT +
Preference number: 4 (lower is better)
Translates to: EAGPDPVPPQGPTMGPACGQLGS*VGKGEP
Trigger: AGGTTCGCCTTTGCCGACGCAAGAGCCCAACTGCCC...GCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp TCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCAGTTGGGCTCTTaGGTCGGCAAAGGCGAACCT +
Preference number: 4 (lower is better)
Translates to: SGPTAGTNHGPRLPEACSGQLGS*VGKGEP
Trigger: AGGTTCGCCTTTGCCGACGCAAGAGCCCAACTGCCC...GCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp GAGGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCGACCCTGAGGACCTCTaGTTCAGGCTGGGGACATGC +
Preference number: 4 (lower is better)
Translates to: EAGPDPVPPQGPTMGPACDPEDL*FRLGTC
Trigger: GCATGTCCCCAGCCTGAAGCAGAGGTCCTCAGGGTC...GCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp CCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGTCCTCGCGGTTCTTCTaGCGGCCTCTTCTCAGACAG +
Preference number: 4 (lower is better)
Translates to: PVPPQGPTMGPACLRPAASSRFF*RPLLRQ
Trigger: CTGTCTGAGAAGAGGCCGGCAGAAGAACCGCGAGGA...CGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp AGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGGCGGACCCCAGGGCCCTaGGGGCATCAGCCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: SWGAPVAPLTGQEPGKFWRTPGP*GHQPGR
Trigger: CCTACCTGGCTGATGCCCGCAGGGCCCTGGGGTCCG...CCAGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp CCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGAAGTCCTCTGGCTTTaGAGTGGTCAGGGCGGCCAA +
Preference number: 4 (lower is better)
Translates to: PQGPTMGPACLRPAAGQAEVLWL*SGQGGQ
Trigger: TTGGCCGCCCTGACCACTGCAAAGCCAGAGGACTTC...GGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp CCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCCCGTGTAGCAAGCTATaGGGTCTCCAGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PQGPTMGPACLRPAAGQAPCSKL*GLQQQQ
Trigger: CTGCTGCTGCTGGAGACCCCATAGCTTGCTACACGG...GGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CCA 90 bp ATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGCCCCACAGTCCCTGCTaGCCTCTGTCTAAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: MGPACLRPAAGQAGWHGLPHSPC*PLSKEG
Trigger: TCCTTCCTTAGACAGAGGCCAGCAGGGACTGTGGGG...CAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp GCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGTGGGTCCACGTTGGGTGTGCTaGGGGCCTCCGTGGGCACTC +
Preference number: 4 (lower is better)
Translates to: ACSGPSRLAWAGLFCWVGPRWVC*GPPWAL
Trigger: GAGTGCCCACGGAGGCCCCCAGCACACCCAACGTGG...ACCCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp TCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCCCAAGCCGGCTGGCATaGGCTGGCCTATTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: SGPTAGTNHGPRLPEACSPSRLA*AGLFCW
Trigger: CCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGG...GCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp GCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGTGGGTGCTGGGGTGCCCCTGTaGCACCACTCACAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ACSGPSRLAWAGLFCWVGAGVPL*HHSQAR
Trigger: CCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGC...ACCCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp AGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGGCGCCCGGAGCTCCCGTaGCCTGCTGCCCAGCGATGT +
Preference number: 4 (lower is better)
Translates to: SWGAPVAPLTGQEPGKFWRPELP*PAAQRC
Trigger: ACATCGCTGGGCAGCAGGCCACGGGAGCTCCGGGCG...CCAGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360203.11
ENST00000496816.5
CDS-3UTR CCA 90 bp GAGGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCTCACAGGCAGGGCACTaGAAGGGCACCACGTCCTCT +
Preference number: 4 (lower is better)
Translates to: EAGPDPVPPQGPTMGPACSQAGH*KGTTSS
Trigger: AGAGGACGTGGTGCCCTTCCAGTGCCCTGCCTGTGA...GCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360203.11
ENST00000496816.5
CDS-3UTR CCA 90 bp GAGGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCGTTGCCAGCAGGCTTaGCAGCGCTGGAAGTCACAG +
Preference number: 4 (lower is better)
Translates to: EAGPDPVPPQGPTMGPACRCQQA*QRWKSQ
Trigger: CTGTGACTTCCAGCGCTGCCAAGCCTGCTGGCAACG...GCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360203.11
ENST00000496816.5
CDS-3UTR TCA 90 bp CCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGGCCACGTCTCGGATaGCATGGCCAAAGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: PQGPTMGPACLRPAAGQAGPRLG*HGQSCH
Trigger: ATGACAACTTTGGCCATGTCATCCGAGACGTGGCCC...GGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR TCA 90 bp GAGGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCGACGCACAAACATGCTaGACCTGTGCAGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: EAGPDPVPPQGPTMGPACDAQTC*TCAAGG
Trigger: TCCCCCTGCTGCACAGGTTCAGCATGTTTGTGCGTC...GCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR TCA 90 bp GGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGACGCACAAACATGCTaGACCTGTGCAGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: GRPRSGPTAGTNHGPRLPDAQTC*TCAAGG
Trigger: TCCCCCTGCTGCACAGGTTCAGCATGTTTGTGCGTC...AGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR TCA 90 bp GGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGAGAGCCCTGTCCCCTaGTTAAAAGTGGACACGTGC +
Preference number: 4 (lower is better)
Translates to: GTNHGPRLPEACSGPSRLESPVP*LKVDTC
Trigger: GCACGTGTCCACTTTTAATCAGGGGACAGGGCTCTC...CAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR TCA 90 bp TCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGCGATGTCTCTCCCATaGGGCTCACCCCACTCAGAT +
Preference number: 4 (lower is better)
Translates to: SGPTAGTNHGPRLPEACSAMSLP*GSPHSD
Trigger: ATCTGAGTGGGGTGAGCCTCATGGGAGAGACATCGC...GCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360203.11
ENST00000496816.5
CDS-3UTR GCA 90 bp CCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGGAAAAGCTCTCCTTaGGCCCTCTCGGCAATCTTG +
Preference number: 4 (lower is better)
Translates to: PQGPTMGPACLRPAAGQAGKSSP*ALSAIL
Trigger: CAAGATTGCCGAGAGGGCGCAAGGAGAGCTTTTCCC...GGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp AGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGGGGGTGGGGCTCACCCTaGTGCGCTGCCTTGGTCTGC +
Preference number: 4 (lower is better)
Translates to: SWGAPVAPLTGQEPGKFWGWGSP*CAALVC
Trigger: GCAGACCAAGGCAGCGCAGCAGGGTGAGCCCCACCC...CCAGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp GATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGACCCTGAGGACCTCTaGTTCAGGCTGGGGACATGC +
Preference number: 4 (lower is better)
Translates to: DPVPPQGPTMGPACLRPADPEDL*FRLGTC
Trigger: GCATGTCCCCAGCCTGAAGCAGAGGTCCTCAGGGTC...TGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp CCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGCAGGAACTGGCTCCTaGTCATACTCCACACACAGG +
Preference number: 4 (lower is better)
Translates to: PQGPTMGPACLRPAAGQAAGTGS*SYSTHR
Trigger: CCTGTGTGTGGAGTATGAGCAGGAGCCAGTTCCTGC...GGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp GGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCAGGAACTGGCTCCTaGTCATACTCCACACACAGG +
Preference number: 4 (lower is better)
Translates to: GTNHGPRLPEACSGPSRLAGTGS*SYSTHR
Trigger: CCTGTGTGTGGAGTATGAGCAGGAGCCAGTTCCTGC...CAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp GGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGCCTTGGAGCAGGTTGTaGTTCTTGGGGTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: GTNHGPRLPEACSGPSRLPWSRL*FLGSSA
Trigger: TGCTGAGGACCCCAAGAAGCACAACCTGCTCCAAGG...CAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp CCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGGCCGGTCAGGTCTGTaGACGTCTGTGAGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: PDPVPPQGPTMGPACLRPGRSGL*TSVRSA
Trigger: AGCGCTTCTCACAGACGTGCACAGACCTGACCGGCC...AGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp CCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTCCCTATGGCACAGACTaGTCACTTGTCTCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: PDPVPPQGPTMGPACLRPPYGTD*SLVSAA
Trigger: CGCCGCGGAGACAAGTGAGCAGTCTGTGCCATAGGG...AGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp CCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCACTCCTGGTAAGCGATaGGAGCATGTGCACTGGGAC +
Preference number: 4 (lower is better)
Translates to: PQGPTMGPACLRPAAGQATPGKR*EHVHWD
Trigger: GTCCCAGTGCACATGCTCGCATCGCTTACCAGGAGT...GGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp AGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGTGGGCTCCCGTGGCCTGCTaGCCAGCGATGTCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: RPAAGQAGWHGLAYSVGWAPVAC*PAMSLP
Trigger: TGGGAGAGACATCGCTGGGCAGCAGGCCACGGGAGC...CCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360203.11
ENST00000496816.5
CDS-3UTR GCA 90 bp GGAGCCCTGTGGGTAAGCACAGGAGGCACGGCAAGCCTCTCCTCCTGGGGTCCCGCTCCCGTGGCCTGCTaGCCAGCGATGTCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: GALWVSTGGTASLSSWGPAPVAC*PAMSLP
Trigger: TGGGAGAGACATCGCTGGGCAGCAGGCCACGGGAGC...GGGACCCCAGGAGGAGAGGCTTGCCGTGCCTCCTGTGCTTACCCACAGGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496816.5
CDS-3UTR GCA 90 bp GGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGAAATTTGAAAACGGCTaGGCCTTGCCCAGGACCCGG +
Preference number: 4 (lower is better)
Translates to: GTNHGPRLPEACSGPSRLKFENG*ALPRTR
Trigger: CCGGGTCCTGGGCAAGGCGCAGCCGTTTTCAAATTT...CAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370018.7
CDS-3UTR GCA 90 bp AGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGGCCGAGCCACCACCATTaGCCGGAGAGCTGCACGGGC +
Preference number: 4 (lower is better)
Translates to: SWGAPVAPLTGQEPGKFWPSHHH*PESCTG
Trigger: GCCCGTGCAGCTCTCCGGGCAATGGTGGTGGCTCGG...CCAGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370018.7
CDS-3UTR GCA 90 bp GATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCCTACACGGCGTTTTaGGCGTTCTGTGTCCGGCTC +
Preference number: 4 (lower is better)
Translates to: DPVPPQGPTMGPACLRPAAYTAF*AFCVRL
Trigger: GAGCCGGACACAGAACGCGCAAAACGCCGTGTAGGC...TGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370018.7
CDS-3UTR GCA 90 bp TCAGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTCGGAGGGGGTCCGCCTaGTCTTCGGCTCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SAGVPLWHHSQARSQGSSRRGSA*SSAPPG
Trigger: GCCTGGAGGAGCCGAAGAGCAGGCGGACCCCCTCCG...AGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370018.7
CDS-3UTR GCA 90 bp GATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCACCACTTCCGGTCCGTTaGTTTGTGCTCCCGGCGGAA +
Preference number: 4 (lower is better)
Translates to: DPVPPQGPTMGPACLRPAPLPVR*FVLPAE
Trigger: TTCCGCCGGGAGCACAAAGCAACGGACCGGAAGTGG...TGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370018.7
CDS-3UTR CCA 90 bp TCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCCCGTGTAGCAAGCTATaGGGTCTCCAGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SGPTAGTNHGPRLPEACSPCSKL*GLQQQQ
Trigger: CTGCTGCTGCTGGAGACCCCATAGCTTGCTACACGG...GCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CCA 90 bp CTCAGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCAGGGAGCGGACGCCCTaGCGGACCAGCTCGTGCATG +
Preference number: 4 (lower is better)
Translates to: LSWGAPVAPLTGQEPGKFRERTP*RTSSCM
Trigger: CATGCACGAGCTGGTCCGCCAGGGCGTCCGCTCCCT...GAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CCA 90 bp CTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGGCGCCGTTCTTCCAGTaGGGTCCAGGACCGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LRPAAGQAGWHGLAYSVGAPFFQ*GPGPAV
Trigger: CACAGCCGGTCCTGGACCCCACTGGAAGAACGGCGC...CCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CCA 90 bp AGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGTGGAGCGCTGCCAAGAGTTaGCTACAGCCCGCGGACCCC +
Preference number: 4 (lower is better)
Translates to: RPAAGQAGWHGLAYSVGWSAAKS*LQPADP
Trigger: GGGGTCCGCGGGCTGTAGCCAACTCTTGGCAGCGCT...CCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp CAGAGGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGGAGGTCCTGAGGACTaGCTGGGACCTGCATCCTCA +
Preference number: 4 (lower is better)
Translates to: QRQAQIRSHRRDQPWAPPGGPED*LGPASS
Trigger: TGAGGATGCAGGTCCCAGCCAGTCCTCAGGACCTCC...AGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCCTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp GCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGTGGGTGATGCTGCAGGCCCGTaGGGAGGTCCTGAGGACTGG +
Preference number: 4 (lower is better)
Translates to: ACSGPSRLAWAGLFCWVGDAAGP*GGPEDW
Trigger: CCAGTCCTCAGGACCTCCCCACGGGCCTGCAGCATC...ACCCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp AGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGGCCACGTTGGGTGTGCTaGGGGCCTCCGTGGGCACTC +
Preference number: 4 (lower is better)
Translates to: SWGAPVAPLTGQEPGKFWPRWVC*GPPWAL
Trigger: GAGTGCCCACGGAGGCCCCCAGCACACCCAACGTGG...CCAGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp GCGCTGGAAGTCACAGGCAGGGCACTGGAAGGGCACCACGTCCTCTGCCCCACACCACGTTGGGTGTGCTaGGGGCCTCCGTGGGCACTC +
Preference number: 4 (lower is better)
Translates to: ALEVTGRALEGHHVLCPTPRWVC*GPPWAL
Trigger: GAGTGCCCACGGAGGCCCCCAGCACACCCAACGTGG...TGTGGGGCAGAGGACGTGGTGCCCTTCCAGTGCCCTGCCTGTGACTTCCAGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496816.5
CDS-3UTR CCA 90 bp GATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCATCACAGGCAGGGCACTaGAAGGGCACCACGTCCTCT +
Preference number: 4 (lower is better)
Translates to: DPVPPQGPTMGPACLRPASQAGH*KGTTSS
Trigger: AGAGGACGTGGTGCCCTTCCAGTGCCCTGCCTGTGA...TGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360203.11
ENST00000496816.5
CDS-3UTR CCA 90 bp CAGAGGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTCGTTGCCAGCAGGCTTaGCAGCGCTGGAAGTCACAG +
Preference number: 4 (lower is better)
Translates to: QRQAQIRSHRRDQPWAPPRCQQA*QRWKSQ
Trigger: CTGTGACTTCCAGCGCTGCCAAGCCTGCTGGCAACG...AGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCCTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360203.11
ENST00000496816.5
CDS-3UTR TCA 90 bp CGTAGGGCTCTCCAGGATGCCATTCACCTTCTTCCAAGTGAGGCTGGCCACCGGGCGCGCAGTCGGCGCTaGGCCCACTGCACTTCCGCC +
Preference number: 4 (lower is better)
Translates to: RRALQDAIHLLPSEAGHRARSRR*AHCTSA
Trigger: GGCGGAAGTGCAGTGGGCTCAGCGCCGACTGCGCGC...CCGGTGGCCAGCCTCACTTGGAAGAAGGTGAATGGCATCCTGGAGAGCCCTACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469728.5
CDS-3UTR GCA 90 bp AGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGGACAGCCCTGGACGCCTaGTGCCGGTACCACTCCTGC +
Preference number: 4 (lower is better)
Translates to: SWGAPVAPLTGQEPGKFWTALDA*CRYHSC
Trigger: GCAGGAGTGGTACCGGCAGCAGGCGTCCAGGGCTGT...CCAGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp GATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGAAGTCCTCTGGCTTTaGAGTGGTCAGGGCGGCCAA +
Preference number: 4 (lower is better)
Translates to: DPVPPQGPTMGPACLRPAEVLWL*SGQGGQ
Trigger: TTGGCCGCCCTGACCACTGCAAAGCCAGAGGACTTC...TGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp GGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGAACATGCTGAACCTGTaGAGCAGGGGGAAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: GTNHGPRLPEACSGPSRLNMLNL*SRGKSS
Trigger: AGAGGACTTCCCCCTGCTGCACAGGTTCAGCATGTT...CAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp GGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTTTAAAAGTGGACACGTaGCCACGGGGGTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GRPRSGPTAGTNHGPRLPLKVDT*PRGSPP
Trigger: AGGAGGAGACCCCCGTGGGCACGTGTCCACTTTTAA...AGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp CAGAGGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTCCGTGTAGCAAGCTATaGGGTCTCCAGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: QRQAQIRSHRRDQPWAPPPCSKL*GLQQQQ
Trigger: CTGCTGCTGCTGGAGACCCCATAGCTTGCTACACGG...AGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CCA 90 bp CCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGCCTGAAGCCAGGTCATaGGGAGTCAGGTCAAAGGAT +
Preference number: 4 (lower is better)
Translates to: PVPPQGPTMGPACLRPAAPEARS*GVRSKD
Trigger: ATCCTTTGACCTGACTCCCCATGACCTGGCTTCAGG...CGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CCA 90 bp AGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGGCTCCATGTTCAGCCCTaGGCTGGGGGAGTCCGCGCT +
Preference number: 4 (lower is better)
Translates to: SWGAPVAPLTGQEPGKFWLHVQP*AGGVRA
Trigger: AGCGCGGACTCCCCCAGCCCAGGGCTGAACATGGAG...CCAGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CCA 90 bp CAGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGCTCCATGTTCAGCCCTaGGCTGGGGGAGTCCGCGCT +
Preference number: 4 (lower is better)
Translates to: QLGCPCGTTHRPGAREVLLHVQP*AGGVRA
Trigger: AGCGCGGACTCCCCCAGCCCAGGGCTGAACATGGAG...CAGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CCA 90 bp GGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGTTCTCCAGGCAGACTaGGAAAGGGATCTGCATCTC +
Preference number: 4 (lower is better)
Translates to: GTNHGPRLPEACSGPSRLVLQAD*ERDLHL
Trigger: GAGATGCAGATCCCTTTCCCAGTCTGCCTGGAGAAC...CAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CCA 90 bp CTCAGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCGCGCCGTTCTTCCAGTaGGGTCCAGGACCGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LSWGAPVAPLTGQEPGKFAPFFQ*GPGPAV
Trigger: CACAGCCGGTCCTGGACCCCACTGGAAGAACGGCGC...GAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CCA 90 bp CCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGAGAAGCGCTGCTTGTaGTGTGGACGCACAAACATG +
Preference number: 4 (lower is better)
Translates to: PQGPTMGPACLRPAAGQAEKRCL*CGRTNM
Trigger: CATGTTTGTGCGTCCACACCACAAGCAGCGCTTCTC...GGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp GCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGTGGGTGTCCTGAGGACTGGCTaGGACCTGCATCCTCACCGC +
Preference number: 4 (lower is better)
Translates to: ACSGPSRLAWAGLFCWVGVLRTG*DLHPHR
Trigger: GCGGTGAGGATGCAGGTCCCAGCCAGTCCTCAGGAC...ACCCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp GCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGTGGGTCCGGCTGGCATGGGCTaGCCTATTCTGTTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: ACSGPSRLAWAGLFCWVGPAGMG*PILLGG
Trigger: CCCACCCAACAGAATAGGCCAGCCCATGCCAGCCGG...ACCCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp CTCAGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCGCGGGCCAAGCCGGCTaGCATGGGCTGGCCTATTCT +
Preference number: 4 (lower is better)
Translates to: LSWGAPVAPLTGQEPGKFAGQAG*HGLAYS
Trigger: AGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGC...GAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp AGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGGGCGGGCCAAGCCGGCTaGCATGGGCTGGCCTATTCT +
Preference number: 4 (lower is better)
Translates to: SWGAPVAPLTGQEPGKFWAGQAG*HGLAYS
Trigger: AGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGC...CCAGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp TCAGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGGTGAGGGGCTCAGCTaGGGTGCCCCTGTGGCACCA +
Preference number: 4 (lower is better)
Translates to: SAGVPLWHHSQARSQGSSGEGLS*GAPVAP
Trigger: TGGTGCCACAGGGGCACCCCAGCTGAGCCCCTCACC...AGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp AGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGTGGCAGGCTTGGCAGCGCTaGAAGTCACAGGCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: RPAAGQAGWHGLAYSVGWQAWQR*KSQAGH
Trigger: GTGCCCTGCCTGTGACTTCCAGCGCTGCCAAGCCTG...CCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360203.11
ENST00000496816.5
CDS-3UTR TCA 90 bp CAGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGAGCGTTGCCCCAGGATaGCAAGGCCCGATCCGGGAA +
Preference number: 4 (lower is better)
Translates to: QLGCPCGTTHRPGAREVLSVAPG*QGPIRE
Trigger: TTCCCGGATCGGGCCTTGTCATCCTGGGGCAACGCT...CAGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR TCA 90 bp CTCAGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCAGCGTTGCCCCAGGATaGCAAGGCCCGATCCGGGAA +
Preference number: 4 (lower is better)
Translates to: LSWGAPVAPLTGQEPGKFSVAPG*QGPIRE
Trigger: TTCCCGGATCGGGCCTTGTCATCCTGGGGCAACGCT...GAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR TCA 90 bp CAGAGGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGAGAGCCCTGTCCCCTaGTTAAAAGTGGACACGTGC +
Preference number: 4 (lower is better)
Translates to: QRQAQIRSHRRDQPWAPPESPVP*LKVDTC
Trigger: GCACGTGTCCACTTTTAATCAGGGGACAGGGCTCTC...AGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp CAGAGGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGGGAAAAGCTCTCCTTaGGCCCTCTCGGCAATCTTG +
Preference number: 4 (lower is better)
Translates to: QRQAQIRSHRRDQPWAPPGKSSP*ALSAIL
Trigger: CAAGATTGCCGAGAGGGCGCAAGGAGAGCTTTTCCC...AGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp CCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGCAATGTTGTGTGCTCTaGGGCTCTTGGCATCCAACA +
Preference number: 4 (lower is better)
Translates to: PVPPQGPTMGPACLRPAAQCCVL*GSWHPT
Trigger: TGTTGGATGCCAAGAGCCGCAGAGCACACAACATTG...CGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp TCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCAGGGGCGGCAACCCTTaGATAGTAAGCACTGATGGT +
Preference number: 4 (lower is better)
Translates to: SGPTAGTNHGPRLPEACSRGGNP*IVSTDG
Trigger: ACCATCAGTGCTTACTATGCAAGGGTTGCCGCCCCT...GCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp CTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTGGGCAGTTGGGCTCTTaGGTCGGCAAAGGCGAACCT +
Preference number: 4 (lower is better)
Translates to: LPEACSGPSRLAWAGLFCGQLGS*VGKGEP
Trigger: AGGTTCGCCTTTGCCGACGCAAGAGCCCAACTGCCC...ACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp AGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGTGGGGGCAGTTGGGCTCTTaGGTCGGCAAAGGCGAACCT +
Preference number: 4 (lower is better)
Translates to: RPAAGQAGWHGLAYSVGWGQLGS*VGKGEP
Trigger: AGGTTCGCCTTTGCCGACGCAAGAGCCCAACTGCCC...CCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp AGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGTGGGACCCTGAGGACCTCTaGTTCAGGCTGGGGACATGC +
Preference number: 4 (lower is better)
Translates to: RPAAGQAGWHGLAYSVGWDPEDL*FRLGTC
Trigger: GCATGTCCCCAGCCTGAAGCAGAGGTCCTCAGGGTC...CCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp CTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGGCTGCCTTCGGGGAATaGTGTGCTCAGGCCGATAGC +
Preference number: 4 (lower is better)
Translates to: LRPAAGQAGWHGLAYSVGAAFGE*CAQADS
Trigger: GCTATCGGCCTGAGCACAGCATTCCCCGAAGGCAGC...CCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp CTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTGCTGCCTTCGGGGAATaGTGTGCTCAGGCCGATAGC +
Preference number: 4 (lower is better)
Translates to: LPEACSGPSRLAWAGLFCAAFGE*CAQADS
Trigger: GCTATCGGCCTGAGCACAGCATTCCCCGAAGGCAGC...ACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp AGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGTGGGCTGCCTTCGGGGAATaGTGTGCTCAGGCCGATAGC +
Preference number: 4 (lower is better)
Translates to: RPAAGQAGWHGLAYSVGWAAFGE*CAQADS
Trigger: GCTATCGGCCTGAGCACAGCATTCCCCGAAGGCAGC...CCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp TCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCCCTGAAGCCAGGTCATaGGGAGTCAGGTCAAAGGAT +
Preference number: 4 (lower is better)
Translates to: SGPTAGTNHGPRLPEACSPEARS*GVRSKD
Trigger: ATCCTTTGACCTGACTCCCCATGACCTGGCTTCAGG...GCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CCA 90 bp CTCAGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCGTCCTGAGGACTGGCTaGGACCTGCATCCTCACCGC +
Preference number: 4 (lower is better)
Translates to: LSWGAPVAPLTGQEPGKFVLRTG*DLHPHR
Trigger: GCGGTGAGGATGCAGGTCCCAGCCAGTCCTCAGGAC...GAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp CTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTGGAGGTCCTGAGGACTaGCTGGGACCTGCATCCTCA +
Preference number: 4 (lower is better)
Translates to: LPEACSGPSRLAWAGLFCGGPED*LGPASS
Trigger: TGAGGATGCAGGTCCCAGCCAGTCCTCAGGACCTCC...ACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp GCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGTGGGTTTCCTGGAGGCGGTGTaGCAGGCTGGGCACATCCTA +
Preference number: 4 (lower is better)
Translates to: ACSGPSRLAWAGLFCWVGFLEAV*QAGHIL
Trigger: TAGGATGTGCCCAGCCTGCCACACCGCCTCCAGGAA...ACCCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp CAGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGCCGGCTGGCATGGGCTaGCCTATTCTGTTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: QLGCPCGTTHRPGAREVLPAGMG*PILLGG
Trigger: CCCACCCAACAGAATAGGCCAGCCCATGCCAGCCGG...CAGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp GCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGTGGGTCCAAGCCGGCTGGCATaGGCTGGCCTATTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: ACSGPSRLAWAGLFCWVGPSRLA*AGLFCW
Trigger: CCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGG...ACCCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp CAGAGGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTCTGGTCGAGAGCATCTaGAAAGTTCCCAGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: QRQAQIRSHRRDQPWAPPLVESI*KVPSGV
Trigger: GACCCCACTGGGAACTTTCCAGATGCTCTCGACCAG...AGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496816.5
CDS-3UTR CCA 90 bp CCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGTAGAGCCACAAAGCTaGTCGAGAGCATCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: PQGPTMGPACLRPAAGQAVEPQS*SRASGK
Trigger: CTTTCCAGATGCTCTCGACCAGCTTTGTGGCTCTAC...GGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496816.5
CDS-3UTR TCA 90 bp CTCAGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCCTGCCAGGTGCTGGATaGTCTGGTCCAGCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: LSWGAPVAPLTGQEPGKFLPGAG*SGPASP
Trigger: TGGACTCGCTGGACCAGATCATCCAGCACCTGGCAG...GAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR TCA 90 bp CCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTCCAGGCTCTTCTCCATaGCAGGATAGGAAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: PDPVPPQGPTMGPACLRPPGSSP*QDRKGR
Trigger: TCTTCCCTTCCTATCCTGTCATGGAGAAGAGCCTGG...AGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR TCA 90 bp GGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTTTGCATAGTAAGCACTaGTGGTCTCGGAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: GRPRSGPTAGTNHGPRLPLHSKH*WSRRSC
Trigger: GCAGCTTCTCCGAGACCATCAGTGCTTACTATGCAA...AGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR TCA 90 bp AGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGGCCAGGAACTGCATCTTaGGGACAACCCGGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: SWGAPVAPLTGQEPGKFWPGTAS*GQPGGP
Trigger: TGGACCCCCGGGTTGTCCTCAAGATGCAGTTCCTGG...CCAGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR TCA 90 bp AGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGGGCGACTTGGCCTCGCTaGCAGCATCTTCTCCACGCA +
Preference number: 4 (lower is better)
Translates to: SWGAPVAPLTGQEPGKFWATWPR*QHLLHA
Trigger: TGCGTGGAGAAGATGCTGTCAGCGAGGCCAAGTCGC...CCAGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR TCA 90 bp GGAGCCCTGTGGGTAAGCACAGGAGGCACGGCAAGCCTCTCCTCCTGGGGTCCCGCGATGTCTCTCCCATaGGGCTCACCCCACTCAGAT +
Preference number: 4 (lower is better)
Translates to: GALWVSTGGTASLSSWGPAMSLP*GSPHSD
Trigger: ATCTGAGTGGGGTGAGCCTCATGGGAGAGACATCGC...GGGACCCCAGGAGGAGAGGCTTGCCGTGCCTCCTGTGCTTACCCACAGGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496816.5
CDS-3UTR GCA 90 bp TCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCATGACAGGAGCGACTTaGCACCTTCTTACGGCACAA +
Preference number: 4 (lower is better)
Translates to: SGPTAGTNHGPRLPEACSMTGAT*HLLTAQ
Trigger: TTGTGCCGTAAGAAGGTGGCAAGTCGCTCCTGTCAT...GCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp GAGGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCATGACAGGAGCGACTTaGCACCTTCTTACGGCACAA +
Preference number: 4 (lower is better)
Translates to: EAGPDPVPPQGPTMGPACMTGAT*HLLTAQ
Trigger: TTGTGCCGTAAGAAGGTGGCAAGTCGCTCCTGTCAT...GCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp GAGGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCAATGTTGTGTGCTCTaGGGCTCTTGGCATCCAACA +
Preference number: 4 (lower is better)
Translates to: EAGPDPVPPQGPTMGPACQCCVL*GSWHPT
Trigger: TGTTGGATGCCAAGAGCCGCAGAGCACACAACATTG...GCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp CAGAGGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTAGGGGCGGCAACCCTTaGATAGTAAGCACTGATGGT +
Preference number: 4 (lower is better)
Translates to: QRQAQIRSHRRDQPWAPPRGGNP*IVSTDG
Trigger: ACCATCAGTGCTTACTATGCAAGGGTTGCCGCCCCT...AGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp CAGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGGACCCTGAGGACCTCTaGTTCAGGCTGGGGACATGC +
Preference number: 4 (lower is better)
Translates to: QLGCPCGTTHRPGAREVLDPEDL*FRLGTC
Trigger: GCATGTCCCCAGCCTGAAGCAGAGGTCCTCAGGGTC...CAGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp GATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAAACATGCTGAACCTGTaGAGCAGGGGGAAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: DPVPPQGPTMGPACLRPANMLNL*SRGKSS
Trigger: AGAGGACTTCCCCCTGCTGCACAGGTTCAGCATGTT...TGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp CCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTCCTGAAGCCAGGTCATaGGGAGTCAGGTCAAAGGAT +
Preference number: 4 (lower is better)
Translates to: PDPVPPQGPTMGPACLRPPEARS*GVRSKD
Trigger: ATCCTTTGACCTGACTCCCCATGACCTGGCTTCAGG...AGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CCA 90 bp CCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGAGAAGCGCTGCTTGTaGTGTGGACGCACAAACATG +
Preference number: 4 (lower is better)
Translates to: PDPVPPQGPTMGPACLRPEKRCL*CGRTNM
Trigger: CATGTTTGTGCGTCCACACCACAAGCAGCGCTTCTC...AGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp GCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGTGGGTCCCCACAGTCCCTGCTaGCCTCTGTCTAAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: ACSGPSRLAWAGLFCWVGPHSPC*PLSKEG
Trigger: TCCTTCCTTAGACAGAGGCCAGCAGGGACTGTGGGG...ACCCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp CCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGCTTCGAGAATCCCTATaGCACAGACTGCTCACTTGT +
Preference number: 4 (lower is better)
Translates to: PVPPQGPTMGPACLRPAALRESL*HRLLTC
Trigger: ACAAGTGAGCAGTCTGTGCCATAGGGATTCTCGAAG...CGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360203.11
ENST00000370018.7
CDS-3UTR TCA 90 bp AGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGTGGTATGACGTCCAGTCCTaGAGCCAGGTCATGGGGAGT +
Preference number: 4 (lower is better)
Translates to: RPAAGQAGWHGLAYSVGWYDVQS*SQVMGS
Trigger: ACTCCCCATGACCTGGCTTCAGGACTGGACGTCATA...CCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR TCA 90 bp CTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGGAGAGCCCTGTCCCCTaGTTAAAAGTGGACACGTGC +
Preference number: 4 (lower is better)
Translates to: LRPAAGQAGWHGLAYSVGESPVP*LKVDTC
Trigger: GCACGTGTCCACTTTTAATCAGGGGACAGGGCTCTC...CCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR TCA 90 bp AGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGTGGGAGAGCCCTGTCCCCTaGTTAAAAGTGGACACGTGC +
Preference number: 4 (lower is better)
Translates to: RPAAGQAGWHGLAYSVGWESPVP*LKVDTC
Trigger: GCACGTGTCCACTTTTAATCAGGGGACAGGGCTCTC...CCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp TCAGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTCCCTCTCGGCAATCTTaGGGGCAGAGATGCCGTCTC +
Preference number: 4 (lower is better)
Translates to: SAGVPLWHHSQARSQGSSPSRQS*GQRCRL
Trigger: GAGACGGCATCTCTGCCCGCAAGATTGCCGAGAGGG...AGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp CCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTCAATGTTGTGTGCTCTaGGGCTCTTGGCATCCAACA +
Preference number: 4 (lower is better)
Translates to: PDPVPPQGPTMGPACLRPQCCVL*GSWHPT
Trigger: TGTTGGATGCCAAGAGCCGCAGAGCACACAACATTG...AGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp CAGAGGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTATCTCATCCAGGAACTaGATCTTGAGGACAACCCGG +
Preference number: 4 (lower is better)
Translates to: QRQAQIRSHRRDQPWAPPISSRN*ILRTTR
Trigger: CCGGGTTGTCCTCAAGATGCAGTTCCTGGATGAGAT...AGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp CTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGGCAGGAACTGGCTCCTaGTCATACTCCACACACAGG +
Preference number: 4 (lower is better)
Translates to: LRPAAGQAGWHGLAYSVGAGTGS*SYSTHR
Trigger: CCTGTGTGTGGAGTATGAGCAGGAGCCAGTTCCTGC...CCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp AGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGGTCCTCGCGGTTCTTCTaGCGGCCTCTTCTCAGACAG +
Preference number: 4 (lower is better)
Translates to: SWGAPVAPLTGQEPGKFWSSRFF*RPLLRQ
Trigger: CTGTCTGAGAAGAGGCCGGCAGAAGAACCGCGAGGA...CCAGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp CAGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGTCCTCGCGGTTCTTCTaGCGGCCTCTTCTCAGACAG +
Preference number: 4 (lower is better)
Translates to: QLGCPCGTTHRPGAREVLSSRFF*RPLLRQ
Trigger: CTGTCTGAGAAGAGGCCGGCAGAAGAACCGCGAGGA...CAGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp CTCAGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCGAAGTCCTCTGGCTTTaGAGTGGTCAGGGCGGCCAA +
Preference number: 4 (lower is better)
Translates to: LSWGAPVAPLTGQEPGKFEVLWL*SGQGGQ
Trigger: TTGGCCGCCCTGACCACTGCAAAGCCAGAGGACTTC...GAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp TCAGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGGCCGGTCAGGTCTGTaGACGTCTGTGAGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: SAGVPLWHHSQARSQGSSGRSGL*TSVRSA
Trigger: AGCGCTTCTCACAGACGTGCACAGACCTGACCGGCC...AGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp GCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGTGGGTTTAAAAGTGGACACGTaGCCACGGGGGTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ACSGPSRLAWAGLFCWVGLKVDT*PRGSPP
Trigger: AGGAGGAGACCCCCGTGGGCACGTGTCCACTTTTAA...ACCCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp CTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTTAAAAGTGGACACGTaGCCACGGGGGTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LPEACSGPSRLAWAGLFCLKVDT*PRGSPP
Trigger: AGGAGGAGACCCCCGTGGGCACGTGTCCACTTTTAA...ACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp CCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCACACTGAACACAATCTaGATAATGTCCGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: PQGPTMGPACLRPAAGQATLNTI*IMSASF
Trigger: GAAGCTGGCGGACATTATCCAGATTGTGTTCAGTGT...GGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CCA 90 bp GAGGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCACGTCTCGGATGACATaGCCAAAGTTGTCATACACC +
Preference number: 4 (lower is better)
Translates to: EAGPDPVPPQGPTMGPACTSRMT*PKLSYT
Trigger: GGTGTATGACAACTTTGGCCATGTCATCCGAGACGT...GCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp CAGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGCCCCACAGTCCCTGCTaGCCTCTGTCTAAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: QLGCPCGTTHRPGAREVLPHSPC*PLSKEG
Trigger: TCCTTCCTTAGACAGAGGCCAGCAGGGACTGTGGGG...CAGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR TCA 90 bp CTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGCCAGGCTCTTCTCCATaGCAGGATAGGAAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: LRPAAGQAGWHGLAYSVGPGSSP*QDRKGR
Trigger: TCTTCCCTTCCTATCCTGTCATGGAGAAGAGCCTGG...CCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR TCA 90 bp CTCAGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCGGGCCACGTCTCGGATaGCATGGCCAAAGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: LSWGAPVAPLTGQEPGKFGPRLG*HGQSCH
Trigger: ATGACAACTTTGGCCATGTCATCCGAGACGTGGCCC...GAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR TCA 90 bp TCAGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGACGCACAAACATGCTaGACCTGTGCAGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: SAGVPLWHHSQARSQGSSDAQTC*TCAAGG
Trigger: TCCCCCTGCTGCACAGGTTCAGCATGTTTGTGCGTC...AGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR TCA 90 bp AGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACGTGCCCACGGGGGCACACACAGCCTGCTaGGAGGGGCCCGCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: SFIREPCPLIKSGHVPTGAHTAC*EGPARS
Trigger: GCTCCGGGCGGGCCCCTCTCAGCAGGCTGTGTGTGC...CCCCGTGGGCACGTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000360203.11
ENST00000496816.5
CDS-3UTR GCA 90 bp GCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGTGGGTAGGGGCGGCAACCCTTaGATAGTAAGCACTGATGGT +
Preference number: 4 (lower is better)
Translates to: ACSGPSRLAWAGLFCWVGRGGNP*IVSTDG
Trigger: ACCATCAGTGCTTACTATGCAAGGGTTGCCGCCCCT...ACCCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp AGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACGTGCCCACGGGGGCCCCTCGCTGGCCTTaGCCCGGCAGACCGCCAGGA +
Preference number: 4 (lower is better)
Translates to: SFIREPCPLIKSGHVPTGAPRWP*PGRPPG
Trigger: TCCTGGCGGTCTGCCGGGGCAAGGCCAGCGAGGGGC...CCCCGTGGGCACGTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp CAGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGCCTTGGAGCAGGTTGTaGTTCTTGGGGTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: QLGCPCGTTHRPGAREVLPWSRL*FLGSSA
Trigger: TGCTGAGGACCCCAAGAAGCACAACCTGCTCCAAGG...CAGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp AGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGGGTCTGTGAGAAGCGCTaGTTGTGGTGTGGACGCACA +
Preference number: 4 (lower is better)
Translates to: SWGAPVAPLTGQEPGKFWVCEKR*LWCGRT
Trigger: TGTGCGTCCACACCACAAGCAGCGCTTCTCACAGAC...CCAGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp CAGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGGTCTGTGAGAAGCGCTaGTTGTGGTGTGGACGCACA +
Preference number: 4 (lower is better)
Translates to: QLGCPCGTTHRPGAREVLVCEKR*LWCGRT
Trigger: TGTGCGTCCACACCACAAGCAGCGCTTCTCACAGAC...CAGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp CCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGTTCTTACGGCACAAGTaGATCTGTAGATGGTTACTC +
Preference number: 4 (lower is better)
Translates to: PVPPQGPTMGPACLRPAAFLRHK*ICRWLL
Trigger: GAGTAACCATCTACAGATCCACTTGTGCCGTAAGAA...CGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CCA 90 bp GATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAACGTCTCGGATGACATaGCCAAAGTTGTCATACACC +
Preference number: 4 (lower is better)
Translates to: DPVPPQGPTMGPACLRPATSRMT*PKLSYT
Trigger: GGTGTATGACAACTTTGGCCATGTCATCCGAGACGT...TGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp AGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGTGGGAGAAGCGCTGCTTGTaGTGTGGACGCACAAACATG +
Preference number: 4 (lower is better)
Translates to: RPAAGQAGWHGLAYSVGWEKRCL*CGRTNM
Trigger: CATGTTTGTGCGTCCACACCACAAGCAGCGCTTCTC...CCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp GGAGCCCTGTGGGTAAGCACAGGAGGCACGGCAAGCCTCTCCTCCTGGGGTCCCGAGAAGCGCTGCTTGTaGTGTGGACGCACAAACATG +
Preference number: 4 (lower is better)
Translates to: GALWVSTGGTASLSSWGPEKRCL*CGRTNM
Trigger: CATGTTTGTGCGTCCACACCACAAGCAGCGCTTCTC...GGGACCCCAGGAGGAGAGGCTTGCCGTGCCTCCTGTGCTTACCCACAGGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496816.5
3UTR CAA 72 bp CATCCTAGAGGCCTGAAGGTGCCGTTGCCAGCAGGCTaGGCAGCGCTGGAAGTCACAGGCAGGGCACTGGAA +
Preference number: 4 (lower is better)
Translates to: HPRGLKVPLPAG*AALEVTGRALE
Trigger: TTCCAGTGCCCTGCCTGTGACTTCCAGCGCTGCCAAGCCTGCTGGCAACGGCACCTTCAGGCCTCTAGGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496816.5
CDS-3UTR TCA 90 bp CTCAGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCGCTTGCTTCCGCTCTTaGCCAAGTCCTCAATGTCCA +
Preference number: 4 (lower is better)
Translates to: LSWGAPVAPLTGQEPGKFACFRS*PSPQCP
Trigger: TGGACATTGAGGACTTGGTCAAGAGCGGAAGCAAGC...GAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp CTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGATGACAGGAGCGACTTaGCACCTTCTTACGGCACAA +
Preference number: 4 (lower is better)
Translates to: LRPAAGQAGWHGLAYSVGMTGAT*HLLTAQ
Trigger: TTGTGCCGTAAGAAGGTGGCAAGTCGCTCCTGTCAT...CCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp CTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGATCTCATCCAGGAACTaGATCTTGAGGACAACCCGG +
Preference number: 4 (lower is better)
Translates to: LRPAAGQAGWHGLAYSVGISSRN*ILRTTR
Trigger: CCGGGTTGTCCTCAAGATGCAGTTCCTGGATGAGAT...CCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp ACCGTCCTGGGCACTGCCAGCAGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAGAGCAGCTGTGGGCCTaGTCCTCGCCAGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: TVLGTASSFIREPCPLIKEQLWA*SSPGLP
Trigger: GGGGAGCCCTGGCGAGGAGCAGGCCCACAGCTGCTC...TTTAATCAGGGGACAGGGCTCTCTAATAAAGCTGCTGGCAGTGCCCAGGACGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370018.7
CDS-3UTR GCA 90 bp CAGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGAACATGCTGAACCTGTaGAGCAGGGGGAAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: QLGCPCGTTHRPGAREVLNMLNL*SRGKSS
Trigger: AGAGGACTTCCCCCTGCTGCACAGGTTCAGCATGTT...CAGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp CGTAGGGCTCTCCAGGATGCCATTCACCTTCTTCCAAGTGAGGCTGGCCACCGGCCCTATGGCACAGACTaGTCACTTGTCTCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: RRALQDAIHLLPSEAGHRPYGTD*SLVSAA
Trigger: CGCCGCGGAGACAAGTGAGCAGTCTGTGCCATAGGG...CCGGTGGCCAGCCTCACTTGGAAGAAGGTGAATGGCATCCTGGAGAGCCCTACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469728.5
CDS-3UTR GCA 90 bp TCAGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTACTCCTGGTAAGCGATaGGAGCATGTGCACTGGGAC +
Preference number: 4 (lower is better)
Translates to: SAGVPLWHHSQARSQGSSTPGKR*EHVHWD
Trigger: GTCCCAGTGCACATGCTCGCATCGCTTACCAGGAGT...AGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp GCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGTGGGTATGCCATTCACCTTCTaGTGCAGACATTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: ACSGPSRLAWAGLFCWVGMPFTF*CRHSRT
Trigger: GGTCCTGGAATGTCTGCAGCAGAAGGTGAATGGCAT...ACCCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CCA 90 bp CTCAGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCGTTCTCCAGGCAGACTaGGAAAGGGATCTGCATCTC +
Preference number: 4 (lower is better)
Translates to: LSWGAPVAPLTGQEPGKFVLQAD*ERDLHL
Trigger: GAGATGCAGATCCCTTTCCCAGTCTGCCTGGAGAAC...GAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR TCA 90 bp AGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACGTGCCCACGGGGGGTCTTCTCGGACCGTaGGGGGCCTGGTTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: SFIREPCPLIKSGHVPTGGLLGP*GAWLGS
Trigger: GCTCCCCAACCAGGCCCCTCACGGTCCGAGAAGACC...CCCCGTGGGCACGTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp AGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACGTGCCCACGGGGGGGTGGGGCTCACCCTaGTGCGCTGCCTTGGTCTGC +
Preference number: 4 (lower is better)
Translates to: SFIREPCPLIKSGHVPTGGWGSP*CAALVC
Trigger: GCAGACCAAGGCAGCGCAGCAGGGTGAGCCCCACCC...CCCCGTGGGCACGTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp AGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACGTGCCCACGGGGCCACGCGGGCGATGTTaGCCAGAGCCTTCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SFIREPCPLIKSGHVPTGPRGRC*PEPSPG
Trigger: CCCTGGGGAAGGCTCTGGGCAACATCGCCCGCGTGG...CCCCGTGGGCACGTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp GGCACTGCCAGCAGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACGGACTGGCTGGGACCTaGATCCTCACCGCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: GTASSFIREPCPLIKSGHGLAGT*ILTARP
Trigger: GGGGCGGGCGGTGAGGATGCAGGTCCCAGCCAGTCC...GTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCTGCTGGCAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp AGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGGATGCCATTCACCTTCTaGTGCAGACATTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: SWGAPVAPLTGQEPGKFWMPFTF*CRHSRT
Trigger: GGTCCTGGAATGTCTGCAGCAGAAGGTGAATGGCAT...CCAGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp CGTAGGGCTCTCCAGGATGCCATTCACCTTCTTCCAAGTGAGGCTGGCCACCGGCCCGTGAATATCAGCTaGTCCTCAGAGAGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: RRALQDAIHLLPSEAGHRPVNIS*SSERPP
Trigger: TGGGGGCCTCTCTGAGGAGCAGCTGATATTCACGGG...CCGGTGGCCAGCCTCACTTGGAAGAAGGTGAATGGCATCCTGGAGAGCCCTACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469728.5
CDS-3UTR GCA 90 bp CGTAGGGCTCTCCAGGATGCCATTCACCTTCTTCCAAGTGAGGCTGGCCACCGGAGGCTGGCCACCGGCTaGCCCTCTAATGGAAATGCT +
Preference number: 4 (lower is better)
Translates to: RRALQDAIHLLPSEAGHRRLATG*PSNGNA
Trigger: AGCATTTCCATTAGAGGGGCAGCCGGTGGCCAGCCT...CCGGTGGCCAGCCTCACTTGGAAGAAGGTGAATGGCATCCTGGAGAGCCCTACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469728.5
CDS-3UTR CCA 90 bp CTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTGTGCTCTGCGGCTCTTaGCATCCAACAAGTAATTGT +
Preference number: 4 (lower is better)
Translates to: LPEACSGPSRLAWAGLFCVLCGS*HPTSNC
Trigger: ACAATTACTTGTTGGATGCCAAGAGCCGCAGAGCAC...ACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CCA 90 bp ACCGTCCTGGGCACTGCCAGCAGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGGGAGCGGACGCCCTaGCGGACCAGCTCGTGCATG +
Preference number: 4 (lower is better)
Translates to: TVLGTASSFIREPCPLIKRERTP*RTSSCM
Trigger: CATGCACGAGCTGGTCCGCCAGGGCGTCCGCTCCCT...TTTAATCAGGGGACAGGGCTCTCTAATAAAGCTGCTGGCAGTGCCCAGGACGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370018.7
CDS-3UTR CCA 90 bp CTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGACGTCTCGGATGACATaGCCAAAGTTGTCATACACC +
Preference number: 4 (lower is better)
Translates to: LRPAAGQAGWHGLAYSVGTSRMT*PKLSYT
Trigger: GGTGTATGACAACTTTGGCCATGTCATCCGAGACGT...CCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp GCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGTGGGTACGTCTCGGATGACATaGCCAAAGTTGTCATACACC +
Preference number: 4 (lower is better)
Translates to: ACSGPSRLAWAGLFCWVGTSRMT*PKLSYT
Trigger: GGTGTATGACAACTTTGGCCATGTCATCCGAGACGT...ACCCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp AGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACGTGCCCACGGGGAGGGTGGAGCAGCTGTaGGCCTGCTCCTCGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SFIREPCPLIKSGHVPTGRVEQL*ACSSPG
Trigger: CCCTGGCGAGGAGCAGGCCCACAGCTGCTCCACCCT...CCCCGTGGGCACGTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp ACCGTCCTGGGCACTGCCAGCAGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGGGTGGAGCAGCTGTaGGCCTGCTCCTCGCCAGGG +
Preference number: 4 (lower is better)
Translates to: TVLGTASSFIREPCPLIKRVEQL*ACSSPG
Trigger: CCCTGGCGAGGAGCAGGCCCACAGCTGCTCCACCCT...TTTAATCAGGGGACAGGGCTCTCTAATAAAGCTGCTGGCAGTGCCCAGGACGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370018.7
CDS-3UTR CCA 90 bp AGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGTGGCTTCGAGAATCCCTATaGCACAGACTGCTCACTTGT +
Preference number: 4 (lower is better)
Translates to: RPAAGQAGWHGLAYSVGWLRESL*HRLLTC
Trigger: ACAAGTGAGCAGTCTGTGCCATAGGGATTCTCGAAG...CCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360203.11
ENST00000370018.7
CDS-3UTR TCA 90 bp CGTAGGGCTCTCCAGGATGCCATTCACCTTCTTCCAAGTGAGGCTGGCCACCGGCTTCCTCCTGACCCGTaGATATCAGCTGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: RRALQDAIHLLPSEAGHRLPPDP*ISAAPQ
Trigger: CTGAGGAGCAGCTGATATTCACGGGTCAGGAGGAAG...CCGGTGGCCAGCCTCACTTGGAAGAAGGTGAATGGCATCCTGGAGAGCCCTACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469728.5
CDS-3UTR GCA 90 bp GGCACTGCCAGCAGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACGGGTGGGGCTCACCCTaGTGCGCTGCCTTGGTCTGC +
Preference number: 4 (lower is better)
Translates to: GTASSFIREPCPLIKSGHGWGSP*CAALVC
Trigger: GCAGACCAAGGCAGCGCAGCAGGGTGAGCCCCACCC...GTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCTGCTGGCAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp ACCGTCCTGGGCACTGCCAGCAGCTTTATTAGAGAGCCCTGTCCCCTGATTAAATGGCGGACCAGCTCGTaGATGCTGTGGCCGGGACTG +
Preference number: 4 (lower is better)
Translates to: TVLGTASSFIREPCPLIKWRTSS*MLWPGL
Trigger: CAGTCCCGGCCACAGCATGCACGAGCTGGTCCGCCA...TTTAATCAGGGGACAGGGCTCTCTAATAAAGCTGCTGGCAGTGCCCAGGACGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370018.7
CDS-3UTR GCA 90 bp GGCACTGCCAGCAGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACGGGGCTCAGCTGGGGTaGCCCTGTGGCACCACTCAC +
Preference number: 4 (lower is better)
Translates to: GTASSFIREPCPLIKSGHGAQLG*PCGTTH
Trigger: GTGAGTGGTGCCACAGGGGCACCCCAGCTGAGCCCC...GTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCTGCTGGCAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp CGTAGGGCTCTCCAGGATGCCATTCACCTTCTTCCAAGTGAGGCTGGCCACCGGACTCCTGGTAAGCGATaGGAGCATGTGCACTGGGAC +
Preference number: 4 (lower is better)
Translates to: RRALQDAIHLLPSEAGHRTPGKR*EHVHWD
Trigger: GTCCCAGTGCACATGCTCGCATCGCTTACCAGGAGT...CCGGTGGCCAGCCTCACTTGGAAGAAGGTGAATGGCATCCTGGAGAGCCCTACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469728.5
CDS-3UTR GCA 90 bp AGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACGTGCCCACGGGGGGAGCTCCCGTGGCCTaGTGCCCAGCGATGTCTCTC +
Preference number: 4 (lower is better)
Translates to: SFIREPCPLIKSGHVPTGGAPVA*CPAMSL
Trigger: GAGAGACATCGCTGGGCAGCAGGCCACGGGAGCTCC...CCCCGTGGGCACGTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360203.11
ENST00000496816.5
CDS-3UTR GCA 90 bp CGTAGGGCTCTCCAGGATGCCATTCACCTTCTTCCAAGTGAGGCTGGCCACCGGGTCACCCTCAAGGACTaGTGCAGACATTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: RRALQDAIHLLPSEAGHRVTLKD*CRHSRT
Trigger: GGTCCTGGAATGTCTGCAGCAGTCCTTGAGGGTGAC...CCGGTGGCCAGCCTCACTTGGAAGAAGGTGAATGGCATCCTGGAGAGCCCTACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469728.5
CDS-3UTR CCA 90 bp AGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGGGTGCTCTGCGGCTCTTaGCATCCAACAAGTAATTGT +
Preference number: 4 (lower is better)
Translates to: SWGAPVAPLTGQEPGKFWVLCGS*HPTSNC
Trigger: ACAATTACTTGTTGGATGCCAAGAGCCGCAGAGCAC...CCAGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CCA 90 bp GGCACTGCCAGCAGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACGGTGAGGGGCTCAGCTaGGGTGCCCCTGTGGCACCA +
Preference number: 4 (lower is better)
Translates to: GTASSFIREPCPLIKSGHGEGLS*GAPVAP
Trigger: TGGTGCCACAGGGGCACCCCAGCTGAGCCCCTCACC...GTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCTGCTGGCAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp CGTAGGGCTCTCCAGGATGCCATTCACCTTCTTCCAAGTGAGGCTGGCCACCGGACCCTCAAGGACTGCTaGAGACATTCCAGGACCTTG +
Preference number: 4 (lower is better)
Translates to: RRALQDAIHLLPSEAGHRTLKDC*RHSRTL
Trigger: CAAGGTCCTGGAATGTCTGCAGCAGTCCTTGAGGGT...CCGGTGGCCAGCCTCACTTGGAAGAAGGTGAATGGCATCCTGGAGAGCCCTACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469728.5
CDS-3UTR CCA 90 bp GATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAAAGTGGATCTGTAGATaGTTACTCTCTTGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: DPVPPQGPTMGPACLRPAKWICR*LLSCFF
Trigger: GAAGAAACAAGAGAGTAACCATCTACAGATCCACTT...TGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CCA 90 bp AGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGTGGTTCTTACGGCACAAGTaGATCTGTAGATGGTTACTC +
Preference number: 4 (lower is better)
Translates to: RPAAGQAGWHGLAYSVGWFLRHK*ICRWLL
Trigger: GAGTAACCATCTACAGATCCACTTGTGCCGTAAGAA...CCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR TCA 90 bp AGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACGTGCCCACGGGGGCGACTTGGCCTCGCTaGCAGCATCTTCTCCACGCA +
Preference number: 4 (lower is better)
Translates to: SFIREPCPLIKSGHVPTGATWPR*QHLLHA
Trigger: TGCGTGGAGAAGATGCTGTCAGCGAGGCCAAGTCGC...CCCCGTGGGCACGTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp ACTGCCAGCAGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACGTGTGGCGGACCAGCTCGTaGATGCTGTGGCCGGGACTG +
Preference number: 4 (lower is better)
Translates to: TASSFIREPCPLIKSGHVWRTSS*MLWPGL
Trigger: CAGTCCCGGCCACAGCATGCACGAGCTGGTCCGCCA...CACGTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCTGCTGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp ACCGTCCTGGGCACTGCCAGCAGCTTTATTAGAGAGCCCTGTCCCCTGATTAAACTGCGTTCCAGCTTCTaGTCGGCTCACTGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: TVLGTASSFIREPCPLIKLRSSF*SAHCPA
Trigger: TGCGGGACAGTGAGCCGAGCAGAAGCTGGAACGCAG...TTTAATCAGGGGACAGGGCTCTCTAATAAAGCTGCTGGCAGTGCCCAGGACGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370018.7
CDS-3UTR CCA 90 bp AGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGGTTCTTACGGCACAAGTaGATCTGTAGATGGTTACTC +
Preference number: 4 (lower is better)
Translates to: SWGAPVAPLTGQEPGKFWFLRHK*ICRWLL
Trigger: GAGTAACCATCTACAGATCCACTTGTGCCGTAAGAA...CCAGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CCA 90 bp AGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACGTGCCCACGGGGTTCCTGGAGGCGGTGTaGCAGGCTGGGCACATCCTA +
Preference number: 4 (lower is better)
Translates to: SFIREPCPLIKSGHVPTGFLEAV*QAGHIL
Trigger: TAGGATGTGCCCAGCCTGCCACACCGCCTCCAGGAA...CCCCGTGGGCACGTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp AGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACGTGCCCACGGGGCCAAGCCGGCTGGCATaGGCTGGCCTATTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: SFIREPCPLIKSGHVPTGPSRLA*AGLFCW
Trigger: CCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGG...CCCCGTGGGCACGTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR TCA 90 bp GGCACTGCCAGCAGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACCTGCCAGGTGCTGGATaGTCTGGTCCAGCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: GTASSFIREPCPLIKSGHLPGAG*SGPASP
Trigger: TGGACTCGCTGGACCAGATCATCCAGCACCTGGCAG...GTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCTGCTGGCAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp AGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACGTGCCCACGGGGCGGTCCGTTGCTTTGTaGTCCCGGCGGAAACTGTTC +
Preference number: 4 (lower is better)
Translates to: SFIREPCPLIKSGHVPTGRSVAL*SRRKLF
Trigger: GAACAGTTTCCGCCGGGAGCACAAAGCAACGGACCG...CCCCGTGGGCACGTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370018.7
CDS-3UTR CCA 90 bp GCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGTGGGTAAGTGGATCTGTAGATaGTTACTCTCTTGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: ACSGPSRLAWAGLFCWVGKWICR*LLSCFF
Trigger: GAAGAAACAAGAGAGTAACCATCTACAGATCCACTT...ACCCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CCA 90 bp AGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACGTGCCCACGGGGCCCCACAGTCCCTGCTaGCCTCTGTCTAAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: SFIREPCPLIKSGHVPTGPHSPC*PLSKEG
Trigger: TCCTTCCTTAGACAGAGGCCAGCAGGGACTGTGGGG...CCCCGTGGGCACGTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp ACTGCCAGCAGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACGTGGTCCTGAGGACTGGCTaGGACCTGCATCCTCACCGC +
Preference number: 4 (lower is better)
Translates to: TASSFIREPCPLIKSGHVVLRTG*DLHPHR
Trigger: GCGGTGAGGATGCAGGTCCCAGCCAGTCCTCAGGAC...CACGTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCTGCTGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp GGCACTGCCAGCAGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACTTCCTGGAGGCGGTGTaGCAGGCTGGGCACATCCTA +
Preference number: 4 (lower is better)
Translates to: GTASSFIREPCPLIKSGHFLEAV*QAGHIL
Trigger: TAGGATGTGCCCAGCCTGCCACACCGCCTCCAGGAA...GTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCTGCTGGCAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp CGTAGGGCTCTCCAGGATGCCATTCACCTTCTTCCAAGTGAGGCTGGCCACCGGCTTCGAGAATCCCTATaGCACAGACTGCTCACTTGT +
Preference number: 4 (lower is better)
Translates to: RRALQDAIHLLPSEAGHRLRESL*HRLLTC
Trigger: ACAAGTGAGCAGTCTGTGCCATAGGGATTCTCGAAG...CCGGTGGCCAGCCTCACTTGGAAGAAGGTGAATGGCATCCTGGAGAGCCCTACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469728.5
CDS-3UTR TCA 90 bp AGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACGTGCCCACGGGGGGGCCACGTCTCGGATaGCATGGCCAAAGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: SFIREPCPLIKSGHVPTGGPRLG*HGQSCH
Trigger: ATGACAACTTTGGCCATGTCATCCGAGACGTGGCCC...CCCCGTGGGCACGTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCT
54% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp AGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACGTGCCCACGGGGCCTTGGAGCAGGTTGTaGTTCTTGGGGTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SFIREPCPLIKSGHVPTGPWSRL*FLGSSA
Trigger: TGCTGAGGACCCCAAGAAGCACAACCTGCTCCAAGG...CCCCGTGGGCACGTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp AGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACGTGCCCACGGGGGTCTGTGAGAAGCGCTaGTTGTGGTGTGGACGCACA +
Preference number: 4 (lower is better)
Translates to: SFIREPCPLIKSGHVPTGVCEKR*LWCGRT
Trigger: TGTGCGTCCACACCACAAGCAGCGCTTCTCACAGAC...CCCCGTGGGCACGTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp ACTGCCAGCAGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACGTGGGAGGTCCTGAGGACTaGCTGGGACCTGCATCCTCA +
Preference number: 4 (lower is better)
Translates to: TASSFIREPCPLIKSGHVGGPED*LGPASS
Trigger: TGAGGATGCAGGTCCCAGCCAGTCCTCAGGACCTCC...CACGTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCTGCTGGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR TCA 90 bp AGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACGTGCCCACGGGGCCAGGCTCTTCTCCATaGCAGGATAGGAAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: SFIREPCPLIKSGHVPTGPGSSP*QDRKGR
Trigger: TCTTCCCTTCCTATCCTGTCATGGAGAAGAGCCTGG...CCCCGTGGGCACGTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR TCA 90 bp GGCACTGCCAGCAGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACGGGCCACGTCTCGGATaGCATGGCCAAAGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: GTASSFIREPCPLIKSGHGPRLG*HGQSCH
Trigger: ATGACAACTTTGGCCATGTCATCCGAGACGTGGCCC...GTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCTGCTGGCAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR GCA 90 bp ACTGCCAGCAGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACGTGGAAGTCCTCTGGCTTTaGAGTGGTCAGGGCGGCCAA +
Preference number: 4 (lower is better)
Translates to: TASSFIREPCPLIKSGHVEVLWL*SGQGGQ
Trigger: TTGGCCGCCCTGACCACTGCAAAGCCAGAGGACTTC...CACGTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCTGCTGGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CCA 90 bp ACCGTCCTGGGCACTGCCAGCAGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAGTTCTCCAGGCAGACTaGGAAAGGGATCTGCATCTC +
Preference number: 4 (lower is better)
Translates to: TVLGTASSFIREPCPLIKVLQAD*ERDLHL
Trigger: GAGATGCAGATCCCTTTCCCAGTCTGCCTGGAGAAC...TTTAATCAGGGGACAGGGCTCTCTAATAAAGCTGCTGGCAGTGCCCAGGACGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370018.7
CDS-3UTR TCA 90 bp GGCACTGCCAGCAGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACGCTTGCTTCCGCTCTTaGCCAAGTCCTCAATGTCCA +
Preference number: 4 (lower is better)
Translates to: GTASSFIREPCPLIKSGHACFRS*PSPQCP
Trigger: TGGACATTGAGGACTTGGTCAAGAGCGGAAGCAAGC...GTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCTGCTGGCAGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR TCA 90 bp ACTGCCAGCAGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACGTGTATGACGTCCAGTCCTaGAGCCAGGTCATGGGGAGT +
Preference number: 4 (lower is better)
Translates to: TASSFIREPCPLIKSGHVYDVQS*SQVMGS
Trigger: ACTCCCCATGACCTGGCTTCAGGACTGGACGTCATA...CACGTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCTGCTGGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR TCA 90 bp AGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACGTGCCCACGGGGTTGCATAGTAAGCACTaGTGGTCTCGGAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: SFIREPCPLIKSGHVPTGLHSKH*WSRRSC
Trigger: GCAGCTTCTCCGAGACCATCAGTGCTTACTATGCAA...CCCCGTGGGCACGTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR GCA 90 bp GGCACTGCCAGCAGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACATCTCATCCAGGAACTaGATCTTGAGGACAACCCGG +
Preference number: 4 (lower is better)
Translates to: GTASSFIREPCPLIKSGHISSRN*ILRTTR
Trigger: CCGGGTTGTCCTCAAGATGCAGTTCCTGGATGAGAT...GTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCTGCTGGCAGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CCA 90 bp AGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACGTGCCCACGGGGACACTGAACACAATCTaGATAATGTCCGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SFIREPCPLIKSGHVPTGTLNTI*IMSASF
Trigger: GAAGCTGGCGGACATTATCCAGATTGTGTTCAGTGT...CCCCGTGGGCACGTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CCA 90 bp GGCACTGCCAGCAGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACACACTGAACACAATCTaGATAATGTCCGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GTASSFIREPCPLIKSGHTLNTI*IMSASF
Trigger: GAAGCTGGCGGACATTATCCAGATTGTGTTCAGTGT...GTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCTGCTGGCAGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CAA 90 bp GGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCCAGCGCTGCCAAGAGTaGGCTACAGCCCGCGGACCC +
Preference number: 5 (lower is better)
Translates to: GPACLRPAAGQAGWHGLAQRCQE*ATARGP
Trigger: GGGTCCGCGGGCTGTAGCCAACTCTTGGCAGCGCTG...GGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CAA 90 bp CAGAGGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTAGCCCCTCGCTGGCCTaGCCCCGGCAGACCGCCAGG +
Preference number: 5 (lower is better)
Translates to: QRQAQIRSHRRDQPWAPPSPSLA*PRQTAR
Trigger: CCTGGCGGTCTGCCGGGGCAAGGCCAGCGAGGGGCT...AGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCCTCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CAA 90 bp CCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGCCGAGCCACCACCATaGCCCGGAGAGCTGCACGGG +
Preference number: 5 (lower is better)
Translates to: PVPPQGPTMGPACLRPAAAEPPP*PGELHG
Trigger: CCCGTGCAGCTCTCCGGGCAATGGTGGTGGCTCGGC...CGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370018.7
CDS CCA 90 bp GCCCATGGGGGCAGGAGATCCACGGCTGGGCATGTGCCTAGCCTGTaGCATGGTGGTGCCGGGCACTGCACCCGGGCGGGCGGGGAGCGT +
Preference number: 5 (lower is better)
Translates to: AHGGRRSTAGHVPSL*HGGAGHCTRAGGER
Trigger: ACGCTCCCCGCCCGCCCGGGTGCAGTGCCCGGCACCACCATGCCACAGGCTAGGCACATGCCCAGCCGTGGATCTCCTGCCCCCATGGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647249.1
CDS-3UTR CAA 90 bp CCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCACCACGCGGGCGATGTaGCCCAGAGCCTTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: PQGPTMGPACLRPAAGQATTRAM*PRAFPR
Trigger: CCTGGGGAAGGCTCTGGGCAACATCGCCCGCGTGGT...GGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CAA 90 bp ATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGTGCCAGGGTCTCCTGTaGGGGGTGGCCTGGGCGACA +
Preference number: 5 (lower is better)
Translates to: MGPACLRPAAGQAGWHGLCQGLL*GVAWAT
Trigger: TGTCGCCCAGGCCACCCCCAACAGGAGACCCTGGCA...CAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCAT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CAA 90 bp GGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGTGCCAGGGTCTCCTGTaGGGGGTGGCCTGGGCGACA +
Preference number: 5 (lower is better)
Translates to: GTNHGPRLPEACSGPSRLCQGLL*GVAWAT
Trigger: TGTCGCCCAGGCCACCCCCAACAGGAGACCCTGGCA...CAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CAA 90 bp ATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGGCCTGAAGGTGCCGTaGCCAGCAGGCTTGGCAGCG +
Preference number: 5 (lower is better)
Translates to: MGPACLRPAAGQAGWHGLGLKVP*PAGLAA
Trigger: CGCTGCCAAGCCTGCTGGCAACGGCACCTTCAGGCC...CAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCAT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360203.11
ENST00000496816.5
CDS-3UTR CAA 90 bp ATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGAAAACGGCTGCGCCTaGCCCAGGACCCGGCTCCTG +
Preference number: 5 (lower is better)
Translates to: MGPACLRPAAGQAGWHGLENGCA*PRTRLL
Trigger: CAGGAGCCGGGTCCTGGGCAAGGCGCAGCCGTTTTC...CAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCAT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370018.7
CDS GCA 90 bp ACGGCTGGGCATGTGCCTAGCCTGTGGCATGGTGGTGCCGGGCACTaGACCCGGGCGGGCGGGGAGCGTGTGGGCCCAGGTCTGTACCTC +
Preference number: 5 (lower is better)
Translates to: TAGHVPSLWHGGAGH*TRAGGERVGPGLYL
Trigger: GAGGTACAGACCTGGGCCCACACGCTCCCCGCCCGCCCGGGTGCAGTGCCCGGCACCACCATGCCACAGGCTAGGCACATGCCCAGCCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647249.1
CDS-3UTR CAA 90 bp GGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTTGCCAGGGTCTCCTGTaGGGGGTGGCCTGGGCGACA +
Preference number: 5 (lower is better)
Translates to: GRPRSGPTAGTNHGPRLPCQGLL*GVAWAT
Trigger: TGTCGCCCAGGCCACCCCCAACAGGAGACCCTGGCA...AGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CAA 90 bp CAGAGGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTACCACGCGGGCGATGTaGCCCAGAGCCTTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: QRQAQIRSHRRDQPWAPPTTRAM*PRAFPR
Trigger: CCTGGGGAAGGCTCTGGGCAACATCGCCCGCGTGGT...AGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCCTCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CAA 90 bp CAGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGAGCCCCTCGCTGGCCTaGCCCCGGCAGACCGCCAGG +
Preference number: 5 (lower is better)
Translates to: QLGCPCGTTHRPGAREVLSPSLA*PRQTAR
Trigger: CCTGGCGGTCTGCCGGGGCAAGGCCAGCGAGGGGCT...CAGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CAA 90 bp CCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCAAGGGGCCAGGCGACTaGGCCTCGCTGACAGCATCT +
Preference number: 5 (lower is better)
Translates to: PQGPTMGPACLRPAAGQAKGPGD*ASLTAS
Trigger: AGATGCTGTCAGCGAGGCCAAGTCGCCTGGCCCCTT...GGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CAA 90 bp GATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCACAGCGCTGCCAAGAGTaGGCTACAGCCCGCGGACCC +
Preference number: 5 (lower is better)
Translates to: DPVPPQGPTMGPACLRPAQRCQE*ATARGP
Trigger: GGGTCCGCGGGCTGTAGCCAACTCTTGGCAGCGCTG...TGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CAA 90 bp GAGGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCGCCCTCTCGGCAATCTaGCGGGCAGAGATGCCGTCT +
Preference number: 5 (lower is better)
Translates to: EAGPDPVPPQGPTMGPACALSAI*RAEMPS
Trigger: AGACGGCATCTCTGCCCGCAAGATTGCCGAGAGGGC...GCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CAA 90 bp GGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGTCCAGGAACTGCATCTaGAGGACAACCCGGGGGTCC +
Preference number: 5 (lower is better)
Translates to: GTNHGPRLPEACSGPSRLSRNCI*RTTRGS
Trigger: GGACCCCCGGGTTGTCCTCAAGATGCAGTTCCTGGA...CAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CAA 90 bp GGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTAGGGCAGTTGGGCTCTaGCGTCGGCAAAGGCGAACC +
Preference number: 5 (lower is better)
Translates to: GRPRSGPTAGTNHGPRLPRAVGL*RRQRRT
Trigger: GGTTCGCCTTTGCCGACGCAAGAGCCCAACTGCCCT...AGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CAA 90 bp GGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTAAGGGGCCAGGCGACTaGGCCTCGCTGACAGCATCT +
Preference number: 5 (lower is better)
Translates to: GRPRSGPTAGTNHGPRLPKGPGD*ASLTAS
Trigger: AGATGCTGTCAGCGAGGCCAAGTCGCCTGGCCCCTT...AGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CAA 90 bp GGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTCCGTTGCCAGCAGGCTaGGCAGCGCTGGAAGTCACA +
Preference number: 5 (lower is better)
Translates to: GRPRSGPTAGTNHGPRLPPLPAG*AALEVT
Trigger: TGTGACTTCCAGCGCTGCCAAGCCTGCTGGCAACGG...AGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360203.11
ENST00000496816.5
CDS-3UTR CAA 90 bp CCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGCGGGAAAAGCTCTCCTaGCGCCCTCTCGGCAATCTT +
Preference number: 5 (lower is better)
Translates to: PVPPQGPTMGPACLRPAAREKLS*RPLGNL
Trigger: AAGATTGCCGAGAGGGCGCAAGGAGAGCTTTTCCCG...CGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CAA 90 bp CTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGACCACGCGGGCGATGTaGCCCAGAGCCTTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: LRPAAGQAGWHGLAYSVGTTRAM*PRAFPR
Trigger: CCTGGGGAAGGCTCTGGGCAACATCGCCCGCGTGGT...CCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CAA 90 bp CAGAGGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTAGGGCAGTTGGGCTCTaGCGTCGGCAAAGGCGAACC +
Preference number: 5 (lower is better)
Translates to: QRQAQIRSHRRDQPWAPPRAVGL*RRQRRT
Trigger: GGTTCGCCTTTGCCGACGCAAGAGCCCAACTGCCCT...AGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCCTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CAA 90 bp GCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGTGGGTCAGCGCTGCCAAGAGTaGGCTACAGCCCGCGGACCC +
Preference number: 5 (lower is better)
Translates to: ACSGPSRLAWAGLFCWVGQRCQE*ATARGP
Trigger: GGGTCCGCGGGCTGTAGCCAACTCTTGGCAGCGCTG...ACCCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CAA 90 bp CCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCAACACAGCCAGCACCTaGTCGAGGTCGTCGTCTTGC +
Preference number: 5 (lower is better)
Translates to: PQGPTMGPACLRPAAGQANTAST*SRSSSC
Trigger: GCAAGACGACGACCTCGACAAGGTGCTGGCTGTGTT...GGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CAA 90 bp GAGGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCGCACAGACTGCTCACTaGTCTCCGCGGCGAACCTTC +
Preference number: 5 (lower is better)
Translates to: EAGPDPVPPQGPTMGPACAQTAH*SPRRTF
Trigger: GAAGGTTCGCCGCGGAGACAAGTGAGCAGTCTGTGC...GCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CAA 90 bp GGAGCCCTGTGGGTAAGCACAGGAGGCACGGCAAGCCTCTCCTCCTGGGGTCCCGGCCTGAAGGTGCCGTaGCCAGCAGGCTTGGCAGCG +
Preference number: 5 (lower is better)
Translates to: GALWVSTGGTASLSSWGPGLKVP*PAGLAA
Trigger: CGCTGCCAAGCCTGCTGGCAACGGCACCTTCAGGCC...GGGACCCCAGGAGGAGAGGCTTGCCGTGCCTCCTGTGCTTACCCACAGGGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496816.5
CDS-3UTR CAA 90 bp CCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGGCCTACACGGCGTTTaGCGCGTTCTGTGTCCGGCT +
Preference number: 5 (lower is better)
Translates to: PDPVPPQGPTMGPACLRPGLHGV*RVLCPA
Trigger: AGCCGGACACAGAACGCGCAAAACGCCGTGTAGGCC...AGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370018.7
CDS-3UTR CAA 90 bp GGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGATGCCATTCACCTTTaGTCTCCGCGGCGAACCTTC +
Preference number: 5 (lower is better)
Translates to: GTNHGPRLPEACSGPSRLDAIHL*SPRRTF
Trigger: GAAGGTTCGCCGCGGAGACAAAAGGTGAATGGCATC...CAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318100.9
CDS-3UTR CAA 90 bp GCGCTGGAAGTCACAGGCAGGGCACTGGAAGGGCACCACGTCCTCTGCCCCACATGCCAGGGTCTCCTGTaGGGGGTGGCCTGGGCGACA +
Preference number: 5 (lower is better)
Translates to: ALEVTGRALEGHHVLCPTCQGLL*GVAWAT
Trigger: TGTCGCCCAGGCCACCCCCAACAGGAGACCCTGGCA...TGTGGGGCAGAGGACGTGGTGCCCTTCCAGTGCCCTGCCTGTGACTTCCAGCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496816.5
CDS-3UTR CAA 90 bp CCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTGAGGCCTGCAGCGTGTGAGAAGCGCTGCTaGTGGTGTGGACGCACAAAC +
Preference number: 5 (lower is better)
Translates to: PVPPQGPTMGPACLRPAACEKRC*WCGRTN
Trigger: GTTTGTGCGTCCACACCACAAGCAGCGCTTCTCACA...CGCTGCAGGCCTCAGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS GCA 90 bp CCGTGGGTCGAGGAGGAGCTGTCTCCAACACCCACAGCGTGGCCCTaGAGCGTGAGCTGTATGGAGACACGCAGGAGCCTCGGCGGTCAG +
Preference number: 5 (lower is better)
Translates to: PWVEEELSPTPTAWP*SVSCMETRRSLGGQ
Trigger: CTGACCGCCGAGGCTCCTGCGTGTCTCCATACAGCTCACGCTGCAGGGCCACGCTGTGGGTGTTGGAGACAGCTCCTCCTCGACCCACGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356810.5
CDS-3UTR CAA 90 bp CTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGGCCCTCTCGGCAATCTaGCGGGCAGAGATGCCGTCT +
Preference number: 5 (lower is better)
Translates to: LRPAAGQAGWHGLAYSVGALSAI*RAEMPS
Trigger: AGACGGCATCTCTGCCCGCAAGATTGCCGAGAGGGC...CCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CAA 90 bp GCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGTGGGTAAGGGGCCAGGCGACTaGGCCTCGCTGACAGCATCT +
Preference number: 5 (lower is better)
Translates to: ACSGPSRLAWAGLFCWVGKGPGD*ASLTAS
Trigger: AGATGCTGTCAGCGAGGCCAAGTCGCCTGGCCCCTT...ACCCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CAA 90 bp CTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTAAGGGGCCAGGCGACTaGGCCTCGCTGACAGCATCT +
Preference number: 5 (lower is better)
Translates to: LPEACSGPSRLAWAGLFCKGPGD*ASLTAS
Trigger: AGATGCTGTCAGCGAGGCCAAGTCGCCTGGCCCCTT...ACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CAA 90 bp CAGAGGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTAACACAGCCAGCACCTaGTCGAGGTCGTCGTCTTGC +
Preference number: 5 (lower is better)
Translates to: QRQAQIRSHRRDQPWAPPNTAST*SRSSSC
Trigger: GCAAGACGACGACCTCGACAAGGTGCTGGCTGTGTT...AGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS CCA 90 bp AGAGCACCGTGGGTCGAGGAGGAGCTGTCTCCAACACCCACAGCGTaGCCCTGCAGCGTGAGCTGTATGGAGACACGCAGGAGCCTCGGC +
Preference number: 5 (lower is better)
Translates to: RAPWVEEELSPTPTA*PCSVSCMETRRSLG
Trigger: GCCGAGGCTCCTGCGTGTCTCCATACAGCTCACGCTGCAGGGCCACGCTGTGGGTGTTGGAGACAGCTCCTCCTCGACCCACGGTGCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356810.5
CDS-3UTR CAA 90 bp CTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTTCCGGTCCGTTGCTTaGTGCTCCCGGCGGAAACTG +
Preference number: 5 (lower is better)
Translates to: LPEACSGPSRLAWAGLFCFRSVA*CSRRKL
Trigger: CAGTTTCCGCCGGGAGCACAAAGCAACGGACCGGAA...ACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370018.7
CDS-3UTR CAA 90 bp TCAGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGCCCTCTCGGCAATCTaGCGGGCAGAGATGCCGTCT +
Preference number: 5 (lower is better)
Translates to: SAGVPLWHHSQARSQGSSALSAI*RAEMPS
Trigger: AGACGGCATCTCTGCCCGCAAGATTGCCGAGAGGGC...AGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CAA 90 bp CTCAGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTCCAGGAACTGCATCTaGAGGACAACCCGGGGGTCC +
Preference number: 5 (lower is better)
Translates to: LSWGAPVAPLTGQEPGKFSRNCI*RTTRGS
Trigger: GGACCCCCGGGTTGTCCTCAAGATGCAGTTCCTGGA...GAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CAA 90 bp TCAGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTAGGGCAGTTGGGCTCTaGCGTCGGCAAAGGCGAACC +
Preference number: 5 (lower is better)
Translates to: SAGVPLWHHSQARSQGSSRAVGL*RRQRRT
Trigger: GGTTCGCCTTTGCCGACGCAAGAGCCCAACTGCCCT...AGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS TCA 90 bp GTCCACACTGAACACAATCTGCAGGGGCTCAGGAGCCAACGCGGGTaGGCACTGTGTGCAGTCCCTCATCCTCCAGGCACCCGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: VHTEHNLQGLRSQRG*ALCAVPHPPGTRGL
Trigger: CAGCCCTCGGGTGCCTGGAGGATGAGGGACTGCACACAGTGCTCACCCGCGTTGGCTCCTGAGCCCCTGCAGATTGTGTTCAGTGTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647249.1
CDS-3UTR CAA 90 bp GGCAGGCCCAGATCCGGTCCCACCGCAGGGACCAACCATGGGCCCCGCCTGCCTAAACTGGTAGAAGCCTaGGAGCAGGTTGTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: GRPRSGPTAGTNHGPRLPKLVEA*EQVVLL
Trigger: AAGAAGCACAACCTGCTCCAAGGCTTCTACCAGTTT...AGGCAGGCGGGGCCCATGGTTGGTCCCTGCGGTGGGACCGGATCTGGGCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CAA 90 bp CTCAGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCAACACAGCCAGCACCTaGTCGAGGTCGTCGTCTTGC +
Preference number: 5 (lower is better)
Translates to: LSWGAPVAPLTGQEPGKFNTAST*SRSSSC
Trigger: GCAAGACGACGACCTCGACAAGGTGCTGGCTGTGTT...GAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CAA 90 bp CAGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGAACACAGCCAGCACCTaGTCGAGGTCGTCGTCTTGC +
Preference number: 5 (lower is better)
Translates to: QLGCPCGTTHRPGAREVLNTAST*SRSSSC
Trigger: GCAAGACGACGACCTCGACAAGGTGCTGGCTGTGTT...CAGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CAA 90 bp CTGCCTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGTGAGAAGCGCTGCTaGTGGTGTGGACGCACAAAC +
Preference number: 5 (lower is better)
Translates to: LPEACSGPSRLAWAGLFCCEKRC*WCGRTN
Trigger: GTTTGTGCGTCCACACCACAAGCAGCGCTTCTCACA...ACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CAA 90 bp CTGAGGCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGTGTGAGAAGCGCTGCTaGTGGTGTGGACGCACAAAC +
Preference number: 5 (lower is better)
Translates to: LRPAAGQAGWHGLAYSVGCEKRC*WCGRTN
Trigger: GTTTGTGCGTCCACACCACAAGCAGCGCTTCTCACA...CCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGCCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS TCA 90 bp AATCCCGCCCGGGAACTGGGACTAACAGAACAGACGCGGACACACTaGATGTCGGCCCTTCCCTCCAGCCCCGGTCAAGGGCTCAGCCAA +
Preference number: 5 (lower is better)
Translates to: NPARELGLTEQTRTH*MSALPSSPGQGLSQ
Trigger: TTGGCTGAGCCCTTGACCGGGGCTGGAGGGAAGGGCCGACATTCAGTGTGTCCGCGTCTGTTCTGTTAGTCCCAGTTCCCGGGCGGGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646389.1
CDS-3UTR CAA 90 bp GCCTGCAGCGGGCCAAGCCGGCTGGCATGGGCTGGCCTATTCTGTTGGGTGGGTAATGACAGGAGCGACTaGCCACCTTCTTACGGCACA +
Preference number: 5 (lower is better)
Translates to: ACSGPSRLAWAGLFCWVGNDRSD*PPSYGT
Trigger: TGTGCCGTAAGAAGGTGGCAAGTCGCTCCTGTCATT...ACCCACCCAACAGAATAGGCCAGCCCATGCCAGCCGGCTTGGCCCGCTGCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CAA 90 bp GGCACTGCCAGCAGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACAGCCCCTCGCTGGCCTaGCCCCGGCAGACCGCCAGG +
Preference number: 5 (lower is better)
Translates to: GTASSFIREPCPLIKSGHSPSLA*PRQTAR
Trigger: CCTGGCGGTCTGCCGGGGCAAGGCCAGCGAGGGGCT...GTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCTGCTGGCAGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CAA 90 bp CTCAGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGTGAGAAGCGCTGCTaGTGGTGTGGACGCACAAAC +
Preference number: 5 (lower is better)
Translates to: LSWGAPVAPLTGQEPGKFCEKRC*WCGRTN
Trigger: GTTTGTGCGTCCACACCACAAGCAGCGCTTCTCACA...GAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CAA 90 bp CGTAGGGCTCTCCAGGATGCCATTCACCTTCTTCCAAGTGAGGCTGGCCACCGGGCACAGACTGCTCACTaGTCTCCGCGGCGAACCTTC +
Preference number: 5 (lower is better)
Translates to: RRALQDAIHLLPSEAGHRAQTAH*SPRRTF
Trigger: GAAGGTTCGCCGCGGAGACAAGTGAGCAGTCTGTGC...CCGGTGGCCAGCCTCACTTGGAAGAAGGTGAATGGCATCCTGGAGAGCCCTACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469728.5
CDS-3UTR CAA 90 bp GGAGCCCTGTGGGTAAGCACAGGAGGCACGGCAAGCCTCTCCTCCTGGGGTCCCAAACTGGTAGAAGCCTaGGAGCAGGTTGTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: GALWVSTGGTASLSSWGPKLVEA*EQVVLL
Trigger: AAGAAGCACAACCTGCTCCAAGGCTTCTACCAGTTT...GGGACCCCAGGAGGAGAGGCTTGCCGTGCCTCCTGTGCTTACCCACAGGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496816.5
CDS-3UTR CAA 90 bp AGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACGTGCCCACGGGGCAGCGCTGCCAAGAGTaGGCTACAGCCCGCGGACCC +
Preference number: 5 (lower is better)
Translates to: SFIREPCPLIKSGHVPTGQRCQE*ATARGP
Trigger: GGGTCCGCGGGCTGTAGCCAACTCTTGGCAGCGCTG...CCCCGTGGGCACGTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS TCA 90 bp TGGCCACCGGCTGCCCCTCTAATGGAAATGCTTCCTCCTGACCCGTaGATATCAGCTGCTCCTCAGAGAGGCCCCCAAGGCACTCCTAAG +
Preference number: 5 (lower is better)
Translates to: WPPAAPLMEMLPPDP*ISAAPQRGPQGTPK
Trigger: CTTAGGAGTGCCTTGGGGGCCTCTCTGAGGAGCAGCTGATATTCACGGGTCAGGAGGAAGCATTTCCATTAGAGGGGCAGCCGGTGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469728.5
CDS-3UTR CAA 90 bp AGCTGGGGTGCCCCTGTGGCACCACTCACAGGCCAGGAGCCAGGGAAGTTCTGGAAACTGGTAGAAGCCTaGGAGCAGGTTGTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: SWGAPVAPLTGQEPGKFWKLVEA*EQVVLL
Trigger: AAGAAGCACAACCTGCTCCAAGGCTTCTACCAGTTT...CCAGAACTTCCCTGGCTCCTGGCCTGTGAGTGGTGCCACAGGGGCACCCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
ENST00000496816.5
CDS-3UTR CAA 90 bp ACCGTCCTGGGCACTGCCAGCAGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAGCACAGACTGCTCACTaGTCTCCGCGGCGAACCTTC +
Preference number: 5 (lower is better)
Translates to: TVLGTASSFIREPCPLIKAQTAH*SPRRTF
Trigger: GAAGGTTCGCCGCGGAGACAAGTGAGCAGTCTGTGC...TTTAATCAGGGGACAGGGCTCTCTAATAAAGCTGCTGGCAGTGCCCAGGACGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370018.7
CDS-3UTR CAA 90 bp ACTGCCAGCAGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACGTGCCGTTGCCAGCAGGCTaGGCAGCGCTGGAAGTCACA +
Preference number: 5 (lower is better)
Translates to: TASSFIREPCPLIKSGHVPLPAG*AALEVT
Trigger: TGTGACTTCCAGCGCTGCCAAGCCTGCTGGCAACGG...CACGTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCTGCTGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360203.11
ENST00000496816.5
CDS CCA 90 bp AGAAGTCACGGTTCTCAGACAACGTTCTCACGTATCAAAGGCAGGTaGCATTCGGCTAACTCGGCCCTGCAGACAGCCAAGAATCTATGG +
Preference number: 5 (lower is better)
Translates to: RSHGSQTTFSRIKGR*HSANSALQTAKNLW
Trigger: CCATAGATTCTTGGCTGTCTGCAGGGCCGAGTTAGCCGAATGCCACCTGCCTTTGATACGTGAGAACGTTGTCTGAGAACCGTGACTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488316.1
CDS-3UTR CAA 90 bp GGCACTGCCAGCAGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACAATGACAGGAGCGACTaGCCACCTTCTTACGGCACA +
Preference number: 5 (lower is better)
Translates to: GTASSFIREPCPLIKSGHNDRSD*PPSYGT
Trigger: TGTGCCGTAAGAAGGTGGCAAGTCGCTCCTGTCATT...GTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCTGCTGGCAGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS-3UTR CAA 90 bp ACTGCCAGCAGCTTTATTAGAGAGCCCTGTCCCCTGATTAAAAGTGGACACGTGAATGACAGGAGCGACTaGCCACCTTCTTACGGCACA +
Preference number: 5 (lower is better)
Translates to: TASSFIREPCPLIKSGHVNDRSD*PPSYGT
Trigger: TGTGCCGTAAGAAGGTGGCAAGTCGCTCCTGTCATT...CACGTGTCCACTTTTAATCAGGGGACAGGGCTCTCTAATAAAGCTGCTGGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318100.9
ENST00000360203.11
ENST00000370018.7
CDS TCA 72 bp GGCTCACTGTCCCGCAGTGGTCCCGGCGGGCCTCCCTaGGTCCCCAGCACCCGGCACTGGCTGGCAGCAGGG +
Preference number: 6 (lower is better)
Translates to: GSLSRSGPGGPP*VPSTRHWLAAG
Trigger: CCCTGCTGCCAGCCAGTGCCGGGTGCTGGGGACTCAGGGAGGCCCGCCGGGACCACTGCGGGACAGTGAGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370018.7
CDS GCA 72 bp CATGTGCCTAGCCTGTGGCATGGTGGTGCCGGGCACTaGACCCGGGCGGGCGGGGAGCGTGTGGGCCCAGGT +
Preference number: 6 (lower is better)
Translates to: HVPSLWHGGAGH*TRAGGERVGPG
Trigger: ACCTGGGCCCACACGCTCCCCGCCCGCCCGGGTGCAGTGCCCGGCACCACCATGCCACAGGCTAGGCACATG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647249.1
CDS CCA 72 bp GGCAGGAGATCCACGGCTGGGCATGTGCCTAGCCTGTaGCATGGTGGTGCCGGGCACTGCACCCGGGCGGGC +
Preference number: 6 (lower is better)
Translates to: GRRSTAGHVPSL*HGGAGHCTRAG
Trigger: GCCCGCCCGGGTGCAGTGCCCGGCACCACCATGCCACAGGCTAGGCACATGCCCAGCCGTGGATCTCCTGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647249.1
CDS GCA 72 bp GCAGGGGCTCAGGAGCCAACGCGGGTGAGCACTGTGTaGAGTCCCTCATCCTCCAGGCACCCGAGGGCTGGC +
Preference number: 6 (lower is better)
Translates to: AGAQEPTRVSTV*SPSSSRHPRAG
Trigger: GCCAGCCCTCGGGTGCCTGGAGGATGAGGGACTGCACACAGTGCTCACCCGCGTTGGCTCCTGAGCCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647249.1
CDS CCA 72 bp AGGGCAGTTGGGCTCTTGCGTCGGCAAAGGCGAACCTaGGGGGTGGCCATAGCCCTGCTGCCCTGCCCACAG +
Preference number: 6 (lower is better)
Translates to: RAVGLLRRQRRT*GVAIALLPCPQ
Trigger: CTGTGGGCAGGGCAGCAGGGCTATGGCCACCCCCCAGGTTCGCCTTTGCCGACGCAAGAGCCCAACTGCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370003.2
CDS GCA 72 bp GAGGAGGAGCTGTCTCCAACACCCACAGCGTGGCCCTaGAGCGTGAGCTGTATGGAGACACGCAGGAGCCTC +
Preference number: 6 (lower is better)
Translates to: EEELSPTPTAWP*SVSCMETRRSL
Trigger: GAGGCTCCTGCGTGTCTCCATACAGCTCACGCTGCAGGGCCACGCTGTGGGTGTTGGAGACAGCTCCTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356810.5
CDS CCA 72 bp TGGGTCGAGGAGGAGCTGTCTCCAACACCCACAGCGTaGCCCTGCAGCGTGAGCTGTATGGAGACACGCAGG +
Preference number: 6 (lower is better)
Translates to: WVEEELSPTPTA*PCSVSCMETRR
Trigger: CCTGCGTGTCTCCATACAGCTCACGCTGCAGGGCCACGCTGTGGGTGTTGGAGACAGCTCCTCCTCGACCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356810.5
ENST00000645309.1
CDS TCA 72 bp GAACACAATCTGCAGGGGCTCAGGAGCCAACGCGGGTaGGCACTGTGTGCAGTCCCTCATCCTCCAGGCACC +
Preference number: 6 (lower is better)
Translates to: EHNLQGLRSQRG*ALCAVPHPPGT
Trigger: GGTGCCTGGAGGATGAGGGACTGCACACAGTGCTCACCCGCGTTGGCTCCTGAGCCCCTGCAGATTGTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647249.1
CDS GCA 72 bp CAGGATGACAAGGCCCGATCCGGGAAAAGCTCTCCTTaGGCCCTCTCGGCAATCTTGCGGGCAGAGATGCCG +
Preference number: 6 (lower is better)
Translates to: QDDKARSGKSSP*ALSAILRAEMP
Trigger: CGGCATCTCTGCCCGCAAGATTGCCGAGAGGGCGCAAGGAGAGCTTTTCCCGGATCGGGCCTTGTCATCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000318100.9
ENST00000356810.5
ENST00000360203.11
ENST00000370018.7
ENST00000482936.6
ENST00000488316.1
ENST00000508582.7
ENST00000646389.1
CDS TCA 72 bp GCTGCCCCTCTAATGGAAATGCTTCCTCCTGACCCGTaGATATCAGCTGCTCCTCAGAGAGGCCCCCAAGGC +
Preference number: 6 (lower is better)
Translates to: AAPLMEMLPPDP*ISAAPQRGPQG
Trigger: GCCTTGGGGGCCTCTCTGAGGAGCAGCTGATATTCACGGGTCAGGAGGAAGCATTTCCATTAGAGGGGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469728.5
CDS CCA 72 bp GGTTCTCAGACAACGTTCTCACGTATCAAAGGCAGGTaGCATTCGGCTAACTCGGCCCTGCAGACAGCCAAG +
Preference number: 6 (lower is better)
Translates to: GSQTTFSRIKGR*HSANSALQTAK
Trigger: CTTGGCTGTCTGCAGGGCCGAGTTAGCCGAATGCCACCTGCCTTTGATACGTGAGAACGTTGTCTGAGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488316.1
CDS GCA 72 bp AGCTGCAGAGGCCAGAAGCGCACACATATGCACACGTaGACATACACACACACACACACTCACACACACCAG +
Preference number: 6 (lower is better)
Translates to: SCRGQKRTHMHT*TYTHTHTHTHQ
Trigger: CTGGTGTGTGTGAGTGTGTGTGTGTGTGTATGTGCACGTGTGCATATGTGTGCGCTTCTGGCCTCTGCAGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463361.1