RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RSRC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000174891

Ensembl transcript IDs: ENST00000295930.7, ENST00000312179.10, ENST00000464171.5, ENST00000468344.5, ENST00000471911.5, ENST00000471994.5, ENST00000475278.6, ENST00000476899.6, ENST00000477788.5, ENST00000480119.5, ENST00000480820.5, ENST00000482822.2, ENST00000482822.3, ENST00000494002.5, ENST00000496268.1, ENST00000611884.5, ENST00000682164.1, ENST00000682221.1, ENST00000682500.1, ENST00000683137.1, ENST00000683394.1, ENST00000683516.1, ENST00000683831.1, ENST00000683899.1, ENST00000684156.1, ENST00000684512.1, ENST00000684683.1

Found 154 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TACTTGTTCTACCAGGGTGGCTTGGTCTTCCTCCTTTCTTCTCTTTaGTTCTTCCTCATTTCTTTCTTTGGCTTTCAATGCTTCATCAGC +
Preference number: 1 (lower is better)
Translates to: YLFYQGGLVFLLSSL*FFLISFFGFQCFIS
Trigger: GCTGATGAAGCATTGAAAGCCAAAGAAAGAAATGAGGAAGAAGCAAAGAGAAGAAAGGAGGAAGACCAAGCCACCCTGGTAGAACAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480119.5
3UTR CCA 90 bp GGTCTTCCTCCTTTCTTCTCTTTGCTTCTTCCTCATTTCTTTCTTTaGCTTTCAATGCTTCATCAGCTTTTGCAGCAGCTTCAAGAACCA +
Preference number: 1 (lower is better)
Translates to: GLPPFFSLLLPHFFL*LSMLHQLLQQLQEP
Trigger: TGGTTCTTGAAGCTGCTGCAAAAGCTGATGAAGCATTGAAAGCCAAAGAAAGAAATGAGGAAGAAGCAAAGAGAAGAAAGGAGGAAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480119.5
3UTR GCA 90 bp CTGTATTCAAATATAGATAACAGTTCTAAAGGCCTGGGGGCCAGATaGCTATTTTTAGCAAGGGAATATGAACCTGTTTCCTCCAATGGT +
Preference number: 1 (lower is better)
Translates to: LYSNIDNSSKGLGAR*LFLAREYEPVSSNG
Trigger: ACCATTGGAGGAAACAGGTTCATATTCCCTTGCTAAAAATAGGCATCTGGCCCCCAGGCCTTTAGAACTGTTATCTATATTTGAATACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000482822.2
3UTR-3UTR TCA 90 bp TTCTCTTTATCTCTGCCCTTACGTCGTTCTCTATCCCGAGACCGACTACGCGTTGGCAGGGGGATCGCTTaGGCTCAGGAATTTGAGACC +
Preference number: 2 (lower is better)
Translates to: FSLSLPLRRSLSRDRLRVGRGIA*AQEFET
Trigger: GGTCTCAAATTCCTGAGCTCAAGCGATCCCCCTGCC...AACGCGTAGTCGGTCTCGGGATAGAGAACGACGTAAGGGCAGAGATAAAGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477788.5
3UTR-3UTR TCA 90 bp TTTATCTCTGCCCTTACGTCGTTCTCTATCCCGAGACCGACTACGCGTTCTTCTACGGAGACGAGGTCTTaGCCTGGACCTGTAATCCCT +
Preference number: 2 (lower is better)
Translates to: FISALTSFSIPRPTTRSSTETRS*PGPVIP
Trigger: AGGGATTACAGGTCCAGGTCAAGACCTCGTCTCCGT...AGAAGAACGCGTAGTCGGTCTCGGGATAGAGAACGACGTAAGGGCAGAGATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477788.5
3UTR-3UTR CCA 90 bp TTCTCTTTATCTCTGCCCTTACGTCGTTCTCTATCCCGAGACCGACTACGCGTTGACGAGGTCTTGACCTaGACCTGTAATCCCTGCACT +
Preference number: 2 (lower is better)
Translates to: FSLSLPLRRSLSRDRLRVDEVLT*TCNPCT
Trigger: AGTGCAGGGATTACAGGTCCAGGTCAAGACCTCGTC...AACGCGTAGTCGGTCTCGGGATAGAGAACGACGTAAGGGCAGAGATAAAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477788.5
3UTR-3UTR TCA 90 bp TTCTCTTTATCTCTGCCCTTACGTCGTTCTCTATCCCGAGACCGACTACGCGTTTCACTGCTACGACTATaGGAACGGAGACGAGGTCTT +
Preference number: 2 (lower is better)
Translates to: FSLSLPLRRSLSRDRLRVSLLRL*ERRRGL
Trigger: AAGACCTCGTCTCCGTTCTCATAGTCGTAGCAGTGA...AACGCGTAGTCGGTCTCGGGATAGAGAACGACGTAAGGGCAGAGATAAAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477788.5
3UTR-3UTR TCA 90 bp TCCACAGGGAATAGCAGTGGGGTAAGTAAGACTGAAGTGAGAGCTCTTATCAGTGCATCTAGTAGAAGCTaGTCTCTAAGCAAAATCACC +
Preference number: 2 (lower is better)
Translates to: STGNSSGVSKTEVRALISASSRS*SLSKIT
Trigger: GGTGATTTTGCTTAGAGATCAGCTTCTACTAGATGC...ACTGATAAGAGCTCTCACTTCAGTCTTACTTACCCCACTGCTATTCCCTGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
3UTR-3UTR TCA 90 bp ACCCTACTGTATTCAAATATAGATAACAGTTCTAAAGGCCTGGGGGCCAGATGCTTTAGCAAGGGAATATaGACCTGTTTCCTCCAATGG +
Preference number: 2 (lower is better)
Translates to: TLLYSNIDNSSKGLGARCFSKGI*TCFLQW
Trigger: CCATTGGAGGAAACAGGTTCATATTCCCTTGCTAAA...GCATCTGGCCCCCAGGCCTTTAGAACTGTTATCTATATTTGAATACAGTAGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482822.2
3UTR CAA 90 bp TGGTCTTCCTCCTTTCTTCTCTTTGCTTCTTCCTCATTTCTTTCTTaGGCTTTCAATGCTTCATCAGCTTTTGCAGCAGCTTCAAGAACC +
Preference number: 2 (lower is better)
Translates to: WSSSFLLFASSSFLS*AFNASSAFAAASRT
Trigger: GGTTCTTGAAGCTGCTGCAAAAGCTGATGAAGCATTGAAAGCCAAAGAAAGAAATGAGGAAGAAGCAAAGAGAAGAAAGGAGGAAGACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480119.5
3UTR CAA 90 bp TTACTTGTTCTACCAGGGTGGCTTGGTCTTCCTCCTTTCTTCTCTTaGCTTCTTCCTCATTTCTTTCTTTGGCTTTCAATGCTTCATCAG +
Preference number: 2 (lower is better)
Translates to: LLVLPGWLGLPPFFS*LLPHFFLWLSMLHQ
Trigger: CTGATGAAGCATTGAAAGCCAAAGAAAGAAATGAGGAAGAAGCAAAGAGAAGAAAGGAGGAAGACCAAGCCACCCTGGTAGAACAAGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480119.5
3UTR-3UTR TCA 90 bp CTACAATGGCAGATAGCCTTATCAAAACAATTAGCCGGCTTTCTCCACAGGGAATCTAAAACAATGAGCTaGGATCTGCTAACATGTTGT +
Preference number: 2 (lower is better)
Translates to: LQWQIALSKQLAGFLHRESKTMS*DLLTCC
Trigger: ACAACATGTTAGCAGATCTCAGCTCATTGTTTTAGA...TTCCCTGTGGAGAAAGCCGGCTAATTGTTTTGATAAGGCTATCTGCCATTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
3UTR-3UTR GCA 90 bp CTACAATGGCAGATAGCCTTATCAAAACAATTAGCCGGCTTTCTCCACAGGGAATTAACATGCACATTCTaGTTACATTGTTTAGGGTGC +
Preference number: 2 (lower is better)
Translates to: LQWQIALSKQLAGFLHRELTCTF*LHCLGC
Trigger: GCACCCTAAACAATGTAAGCAGAATGTGCATGTTAA...TTCCCTGTGGAGAAAGCCGGCTAATTGTTTTGATAAGGCTATCTGCCATTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
3UTR-3UTR CCA 90 bp AGAGCAATTAATCTCTTGAACCATTTTTCCTCAGCATCAGCTTTCTCGATAAATTCTACCAGGGTGGCTTaGTCTTCCTCCTTTCTTCTC +
Preference number: 2 (lower is better)
Translates to: RAINLLNHFSSASAFSINSTRVA*SSSFLL
Trigger: GAGAAGAAAGGAGGAAGACCAAGCCACCCTGGTAGA...ATTTATCGAGAAAGCTGATGCTGAGGAAAAATGGTTCAAGAGATTAATTGCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480119.5
3UTR-3UTR CCA 90 bp AGAGCAATTAATCTCTTGAACCATTTTTCCTCAGCATCAGCTTTCTCGATAAATCTTGTTCTACCAGGGTaGCTTGGTCTTCCTCCTTTC +
Preference number: 2 (lower is better)
Translates to: RAINLLNHFSSASAFSINLVLPG*LGLPPF
Trigger: GAAAGGAGGAAGACCAAGCCACCCTGGTAGAACAAG...ATTTATCGAGAAAGCTGATGCTGAGGAAAAATGGTTCAAGAGATTAATTGCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480119.5
3UTR-3UTR GCA 90 bp AGAGCAATTAATCTCTTGAACCATTTTTCCTCAGCATCAGCTTTCTCGATAAATTGCTTCATCAGCTTTTaGAGCAGCTTCAAGAACCAG +
Preference number: 2 (lower is better)
Translates to: RAINLLNHFSSASAFSINCFISF*SSFKNQ
Trigger: CTGGTTCTTGAAGCTGCTGCAAAAGCTGATGAAGCA...ATTTATCGAGAAAGCTGATGCTGAGGAAAAATGGTTCAAGAGATTAATTGCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480119.5
3UTR-3UTR TCA 90 bp ATGGAACGTATAGTTGATTGTCATTCAGCTACTAGAGAAAGGTATTCTACAATGGCATCTAGTAGAAGCTaGTCTCTAAGCAAAATCACC +
Preference number: 2 (lower is better)
Translates to: MERIVDCHSATRERYSTMASSRS*SLSKIT
Trigger: GGTGATTTTGCTTAGAGATCAGCTTCTACTAGATGC...CATTGTAGAATACCTTTCTCTAGTAGCTGAATGACAATCAACTATACGTTCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
3UTR-3UTR TCA 90 bp AAACGGGAAATATTCATGTCAGCTGTTAAAAACCAGTTTTGTAAAGCAAGGCCTTCTAAAACAATGAGCTaGGATCTGCTAACATGTTGT +
Preference number: 2 (lower is better)
Translates to: KREIFMSAVKNQFCKARPSKTMS*DLLTCC
Trigger: ACAACATGTTAGCAGATCTCAGCTCATTGTTTTAGA...AGGCCTTGCTTTACAAAACTGGTTTTTAACAGCTGACATGAATATTTCCCGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
3UTR-3UTR GCA 90 bp CCTAAAAGTCCTATCTCTGGCATGTTTAGTATGGAACGTATAGTTGATTGTCATTTAACATGCACATTCTaGTTACATTGTTTAGGGTGC +
Preference number: 2 (lower is better)
Translates to: PKSPISGMFSMERIVDCHLTCTF*LHCLGC
Trigger: GCACCCTAAACAATGTAAGCAGAATGTGCATGTTAA...ATGACAATCAACTATACGTTCCATACTAAACATGCCAGAGATAGGACTTTTAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
3UTR TCA 72 bp TTCACTGCTACGACTATGAGAACGGAGACGAGGTCTTaGCCTGGACCTGTAATCCCTGCACTTAGTGAGGCC +
Preference number: 3 (lower is better)
Translates to: FTATTMRTETRS*PGPVIPALSEA
Trigger: GGCCTCACTAAGTGCAGGGATTACAGGTCCAGGTCAAGACCTCGTCTCCGTTCTCATAGTCGTAGCAGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477788.5
3UTR-3UTR CAA 90 bp TTCTCTTTATCTCTGCCCTTACGTCGTTCTCTATCCCGAGACCGACTACGCGTTAACGGAGACGAGGTCTaGACCTGGACCTGTAATCCC +
Preference number: 3 (lower is better)
Translates to: FSLSLPLRRSLSRDRLRVNGDEV*TWTCNP
Trigger: GGGATTACAGGTCCAGGTCAAGACCTCGTCTCCGTT...AACGCGTAGTCGGTCTCGGGATAGAGAACGACGTAAGGGCAGAGATAAAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477788.5
3UTR GCA 72 bp AATATAGATAACAGTTCTAAAGGCCTGGGGGCCAGATaGCTATTTTTAGCAAGGGAATATGAACCTGTTTCC +
Preference number: 3 (lower is better)
Translates to: NIDNSSKGLGAR*LFLAREYEPVS
Trigger: GGAAACAGGTTCATATTCCCTTGCTAAAAATAGGCATCTGGCCCCCAGGCCTTTAGAACTGTTATCTATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000482822.2
3UTR-3UTR CAA 90 bp AGAGCAATTAATCTCTTGAACCATTTTTCCTCAGCATCAGCTTTCTCGATAAATTTCTACCAGGGTGGCTaGGTCTTCCTCCTTTCTTCT +
Preference number: 3 (lower is better)
Translates to: RAINLLNHFSSASAFSINFYQGG*VFLLSS
Trigger: AGAAGAAAGGAGGAAGACCAAGCCACCCTGGTAGAA...ATTTATCGAGAAAGCTGATGCTGAGGAAAAATGGTTCAAGAGATTAATTGCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480119.5
3UTR-3UTR CAA 90 bp ATGGAACGTATAGTTGATTGTCATTCAGCTACTAGAGAAAGGTATTCTACAATGCTCCATCATAGGTATTaGGCCAACTGGTTAGGTCTA +
Preference number: 3 (lower is better)
Translates to: MERIVDCHSATRERYSTMLHHRY*ANWLGL
Trigger: TAGACCTAACCAGTTGGCCAAATACCTATGATGGAG...CATTGTAGAATACCTTTCTCTAGTAGCTGAATGACAATCAACTATACGTTCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
3UTR-3UTR CAA 90 bp AGAGCAATTAATCTCTTGAACCATTTTTCCTCAGCATCAGCTTTCTCGATAAATATGCTTCATCAGCTTTaGCAGCAGCTTCAAGAACCA +
Preference number: 3 (lower is better)
Translates to: RAINLLNHFSSASAFSINMLHQL*QQLQEP
Trigger: TGGTTCTTGAAGCTGCTGCAAAAGCTGATGAAGCAT...ATTTATCGAGAAAGCTGATGCTGAGGAAAAATGGTTCAAGAGATTAATTGCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480119.5
3UTR-3UTR CAA 90 bp AGAGCAATTAATCTCTTGAACCATTTTTCCTCAGCATCAGCTTTCTCGATAAATGGTTCCACTGACTTTTaGACTTCTTTACTTGATCTG +
Preference number: 3 (lower is better)
Translates to: RAINLLNHFSSASAFSINGSTDF*TSLLDL
Trigger: CAGATCAAGTAAAGAAGTCAAAAAGTCAGTGGAACC...ATTTATCGAGAAAGCTGATGCTGAGGAAAAATGGTTCAAGAGATTAATTGCTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480119.5
CDS-3UTR GCA 90 bp TCCACAGGGAATAGCAGTGGGGTAAGTAAGACTGAAGTGAGAGCTCTTATCAGTCTGGGAGGCGGAGCTTaGAGTGAGCTGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: STGNSSGVSKTEVRALISLGGGA*SELRSR
Trigger: GCGCGATCTCAGCTCACTGCAAGCTCCGCCTCCCAG...ACTGATAAGAGCTCTCACTTCAGTCTTACTTACCCCACTGCTATTCCCTGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
CDS-3UTR TCA 90 bp TTCTCTTTATCTCTGCCCTTACGTCGTTCTCTATCCCGAGACCGACTACGCGTTACGGAGACGAGGTCTTaGCCTGGACCTGTAATCCCT +
Preference number: 4 (lower is better)
Translates to: FSLSLPLRRSLSRDRLRVTETRS*PGPVIP
Trigger: AGGGATTACAGGTCCAGGTCAAGACCTCGTCTCCGT...AACGCGTAGTCGGTCTCGGGATAGAGAACGACGTAAGGGCAGAGATAAAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477788.5
CDS-3UTR TCA 90 bp TCCACAGGGAATAGCAGTGGGGTAAGTAAGACTGAAGTGAGAGCTCTTATCAGTGGCAAGAAAATGGCGTaGACCTGGGAGGCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: STGNSSGVSKTEVRALISGKKMA*TWEAEL
Trigger: AAGCTCCGCCTCCCAGGTTCACGCCATTTTCTTGCC...ACTGATAAGAGCTCTCACTTCAGTCTTACTTACCCCACTGCTATTCCCTGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
CDS-3UTR TCA 90 bp TTCTCTTTATCTCTGCCCTTACGTCGTTCTCTATCCCGAGACCGACTACGCGTTAGCTACCCAGGAGGTTaGGGTAGGAGGATACCTTCT +
Preference number: 4 (lower is better)
Translates to: FSLSLPLRRSLSRDRLRVSYPGG*GRRIPS
Trigger: AGAAGGTATCCTCCTACCTCAACCTCCTGGGTAGCT...AACGCGTAGTCGGTCTCGGGATAGAGAACGACGTAAGGGCAGAGATAAAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477788.5
CDS-3UTR CCA 90 bp TCCACAGGGAATAGCAGTGGGGTAAGTAAGACTGAAGTGAGAGCTCTTATCAGTCACTGCACTCCAGCATaGGGGATAGAGCGAGACTCC +
Preference number: 4 (lower is better)
Translates to: STGNSSGVSKTEVRALISHCTPA*GIERDS
Trigger: GGAGTCTCGCTCTATCCCCCATGCTGGAGTGCAGTG...ACTGATAAGAGCTCTCACTTCAGTCTTACTTACCCCACTGCTATTCCCTGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
CDS-3UTR TCA 90 bp TTTATCTCTGCCCTTACGTCGTTCTCTATCCCGAGACCGACTACGCGTTCTTCTAGAAGAGCTACTGCTTaGTCGATGCCTGCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: FISALTSFSIPRPTTRSSRRATA*SMPASS
Trigger: AGAAGACGCAGGCATCGATCAAGCAGTAGCTCTTCT...AGAAGAACGCGTAGTCGGTCTCGGGATAGAGAACGACGTAAGGGCAGAGATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477788.5
CDS-3UTR TCA 90 bp TTTATCTCTGCCCTTACGTCGTTCTCTATCCCGAGACCGACTACGCGTTCTTCTTTTCCCTCGACCCCTTaGACGACTTCGACTTCGTTT +
Preference number: 4 (lower is better)
Translates to: FISALTSFSIPRPTTRSSFPSTP*TTSTSF
Trigger: AAACGAAGTCGAAGTCGTTCAAGGGGTCGAGGGAAA...AGAAGAACGCGTAGTCGGTCTCGGGATAGAGAACGACGTAAGGGCAGAGATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477788.5
CDS-3UTR TCA 90 bp CTACAATGGCAGATAGCCTTATCAAAACAATTAGCCGGCTTTCTCCACAGGGAAGGCAAGAAAATGGCGTaGACCTGGGAGGCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: LQWQIALSKQLAGFLHREGKKMA*TWEAEL
Trigger: AAGCTCCGCCTCCCAGGTTCACGCCATTTTCTTGCC...TTCCCTGTGGAGAAAGCCGGCTAATTGTTTTGATAAGGCTATCTGCCATTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
CDS-3UTR GCA 90 bp CTACAATGGCAGATAGCCTTATCAAAACAATTAGCCGGCTTTCTCCACAGGGAACTGAGATCGCGCCACTaGACTCCAGCATGGGGGATA +
Preference number: 4 (lower is better)
Translates to: LQWQIALSKQLAGFLHRELRSRH*TPAWGI
Trigger: TATCCCCCATGCTGGAGTGCAGTGGCGCGATCTCAG...TTCCCTGTGGAGAAAGCCGGCTAATTGTTTTGATAAGGCTATCTGCCATTGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
CDS-3UTR CCA 90 bp CTACAATGGCAGATAGCCTTATCAAAACAATTAGCCGGCTTTCTCCACAGGGAACCGACGTCCCATTTCTaGGTCCAGACCTTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: LQWQIALSKQLAGFLHREPTSHF*VQTFGL
Trigger: GAGCCCAAAGGTCTGGACCCAGAAATGGGACGTCGG...TTCCCTGTGGAGAAAGCCGGCTAATTGTTTTGATAAGGCTATCTGCCATTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611884.5
CDS-3UTR CCA 90 bp CTACAATGGCAGATAGCCTTATCAAAACAATTAGCCGGCTTTCTCCACAGGGAACACTGCACTCCAGCATaGGGGATAGAGCGAGACTCC +
Preference number: 4 (lower is better)
Translates to: LQWQIALSKQLAGFLHREHCTPA*GIERDS
Trigger: GGAGTCTCGCTCTATCCCCCATGCTGGAGTGCAGTG...TTCCCTGTGGAGAAAGCCGGCTAATTGTTTTGATAAGGCTATCTGCCATTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
CDS-3UTR TCA 90 bp TCCACAGGGAATAGCAGTGGGGTAAGTAAGACTGAAGTGAGAGCTCTTATCAGTAAGCGCCGCAGTCCCTaGGTCGTTTCTTTAGATCAG +
Preference number: 4 (lower is better)
Translates to: STGNSSGVSKTEVRALISKRRSP*VVSLDQ
Trigger: CTGATCTAAAGAAACGACTCAGGGACTGCGGCGCTT...ACTGATAAGAGCTCTCACTTCAGTCTTACTTACCCCACTGCTATTCCCTGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
CDS-3UTR TCA 90 bp CTACTAGAGAAAGGTATTCTACAATGGCAGATAGCCTTATCAAAACAATTAGCCGCTCACACCTCCCGTTaGCGTGCAAGCGCCGCAGTC +
Preference number: 4 (lower is better)
Translates to: LLEKGILQWQIALSKQLAAHTSR*RASAAV
Trigger: GACTGCGGCGCTTGCACGTCAACGGGAGGTGTGAGC...GGCTAATTGTTTTGATAAGGCTATCTGCCATTGTAGAATACCTTTCTCTAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
CDS-3UTR TCA 90 bp AGAGCAATTAATCTCTTGAACCATTTTTCCTCAGCATCAGCTTTCTCGATAAATGCTCACACCTCCCGTTaGCGTGCAAGCGCCGCAGTC +
Preference number: 4 (lower is better)
Translates to: RAINLLNHFSSASAFSINAHTSR*RASAAV
Trigger: GACTGCGGCGCTTGCACGTCAACGGGAGGTGTGAGC...ATTTATCGAGAAAGCTGATGCTGAGGAAAAATGGTTCAAGAGATTAATTGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480119.5
CDS-3UTR TCA 90 bp TCCACAGGGAATAGCAGTGGGGTAAGTAAGACTGAAGTGAGAGCTCTTATCAGTTTTCCCTCGACCCCTTaGACGACTTCGACTTCGTTT +
Preference number: 4 (lower is better)
Translates to: STGNSSGVSKTEVRALISFPSTP*TTSTSF
Trigger: AAACGAAGTCGAAGTCGTTCAAGGGGTCGAGGGAAA...ACTGATAAGAGCTCTCACTTCAGTCTTACTTACCCCACTGCTATTCCCTGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
CDS-3UTR GCA 90 bp AAACGGGAAATATTCATGTCAGCTGTTAAAAACCAGTTTTGTAAAGCAAGGCCTCTGGGAGGCGGAGCTTaGAGTGAGCTGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: KREIFMSAVKNQFCKARPLGGGA*SELRSR
Trigger: GCGCGATCTCAGCTCACTGCAAGCTCCGCCTCCCAG...AGGCCTTGCTTTACAAAACTGGTTTTTAACAGCTGACATGAATATTTCCCGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
CDS-3UTR CCA 90 bp TCCACAGGGAATAGCAGTGGGGTAAGTAAGACTGAAGTGAGAGCTCTTATCAGTCTTGTTCTACCAGGGTaGCTTGGTCTTCCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: STGNSSGVSKTEVRALISLVLPG*LGLPPF
Trigger: GAAAGGAGGAAGACCAAGCCACCCTGGTAGAACAAG...ACTGATAAGAGCTCTCACTTCAGTCTTACTTACCCCACTGCTATTCCCTGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
CDS-3UTR CCA 90 bp CTACAATGGCAGATAGCCTTATCAAAACAATTAGCCGGCTTTCTCCACAGGGAATCTACCAGGGTGGCTTaGTCTTCCTCCTTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LQWQIALSKQLAGFLHRESTRVA*SSSFLL
Trigger: GAGAAGAAAGGAGGAAGACCAAGCCACCCTGGTAGA...TTCCCTGTGGAGAAAGCCGGCTAATTGTTTTGATAAGGCTATCTGCCATTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
CDS-3UTR CCA 90 bp TTCTCTTTATCTCTGCCCTTACGTCGTTCTCTATCCCGAGACCGACTACGCGTTTACAAAAATCATAGTTaGGTGTGGCGGTGTGTACCT +
Preference number: 4 (lower is better)
Translates to: FSLSLPLRRSLSRDRLRVYKNHS*VWRCVP
Trigger: AGGTACACACCGCCACACCCAACTATGATTTTTGTA...AACGCGTAGTCGGTCTCGGGATAGAGAACGACGTAAGGGCAGAGATAAAGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477788.5
CDS-3UTR GCA 90 bp TTCTCTTTATCTCTGCCCTTACGTCGTTCTCTATCCCGAGACCGACTACGCGTTTGCTTGATCGATGCCTaGGTCTTCTATCATAAGAAT +
Preference number: 4 (lower is better)
Translates to: FSLSLPLRRSLSRDRLRVCLIDA*VFYHKN
Trigger: ATTCTTATGATAGAAGACGCAGGCATCGATCAAGCA...AACGCGTAGTCGGTCTCGGGATAGAGAACGACGTAAGGGCAGAGATAAAGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477788.5
CDS-3UTR GCA 90 bp CTACAATGGCAGATAGCCTTATCAAAACAATTAGCCGGCTTTCTCCACAGGGAACATAAGAAGAGCTACTaGTTGATCGATGCCTGCGTC +
Preference number: 4 (lower is better)
Translates to: LQWQIALSKQLAGFLHREHKKSY*LIDACV
Trigger: GACGCAGGCATCGATCAAGCAGTAGCTCTTCTTATG...TTCCCTGTGGAGAAAGCCGGCTAATTGTTTTGATAAGGCTATCTGCCATTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
CDS-3UTR GCA 90 bp AAACGGGAAATATTCATGTCAGCTGTTAAAAACCAGTTTTGTAAAGCAAGGCCTCTGAGATCGCGCCACTaGACTCCAGCATGGGGGATA +
Preference number: 4 (lower is better)
Translates to: KREIFMSAVKNQFCKARPLRSRH*TPAWGI
Trigger: TATCCCCCATGCTGGAGTGCAGTGGCGCGATCTCAG...AGGCCTTGCTTTACAAAACTGGTTTTTAACAGCTGACATGAATATTTCCCGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
CDS-3UTR GCA 90 bp TTTATCTCTGCCCTTACGTCGTTCTCTATCCCGAGACCGACTACGCGTTCTTCTTTTTCTCTTTATCTCTaGCCTTACGTCGTTCTCTAT +
Preference number: 4 (lower is better)
Translates to: FISALTSFSIPRPTTRSSFSLYL*PYVVLY
Trigger: ATAGAGAACGACGTAAGGGCAGAGATAAAGAGAAAA...AGAAGAACGCGTAGTCGGTCTCGGGATAGAGAACGACGTAAGGGCAGAGATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477788.5
CDS-3UTR GCA 90 bp CTACAATGGCAGATAGCCTTATCAAAACAATTAGCCGGCTTTCTCCACAGGGAATGCTTCATCAGCTTTTaGAGCAGCTTCAAGAACCAG +
Preference number: 4 (lower is better)
Translates to: LQWQIALSKQLAGFLHRECFISF*SSFKNQ
Trigger: CTGGTTCTTGAAGCTGCTGCAAAAGCTGATGAAGCA...TTCCCTGTGGAGAAAGCCGGCTAATTGTTTTGATAAGGCTATCTGCCATTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
3UTR CAA 72 bp CTACCAGGGTGGCTTGGTCTTCCTCCTTTCTTCTCTTaGCTTCTTCCTCATTTCTTTCTTTGGCTTTCAATG +
Preference number: 4 (lower is better)
Translates to: LPGWLGLPPFFS*LLPHFFLWLSM
Trigger: CATTGAAAGCCAAAGAAAGAAATGAGGAAGAAGCAAAGAGAAGAAAGGAGGAAGACCAAGCCACCCTGGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480119.5
CDS-3UTR TCA 90 bp AAACGGGAAATATTCATGTCAGCTGTTAAAAACCAGTTTTGTAAAGCAAGGCCTAAGCGCCGCAGTCCCTaGGTCGTTTCTTTAGATCAG +
Preference number: 4 (lower is better)
Translates to: KREIFMSAVKNQFCKARPKRRSP*VVSLDQ
Trigger: CTGATCTAAAGAAACGACTCAGGGACTGCGGCGCTT...AGGCCTTGCTTTACAAAACTGGTTTTTAACAGCTGACATGAATATTTCCCGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
CDS-3UTR GCA 90 bp TCCACAGGGAATAGCAGTGGGGTAAGTAAGACTGAAGTGAGAGCTCTTATCAGTTGCTTGATCGATGCCTaGGTCTTCTATCATAAGAAT +
Preference number: 4 (lower is better)
Translates to: STGNSSGVSKTEVRALISCLIDA*VFYHKN
Trigger: ATTCTTATGATAGAAGACGCAGGCATCGATCAAGCA...ACTGATAAGAGCTCTCACTTCAGTCTTACTTACCCCACTGCTATTCCCTGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
CDS-3UTR TCA 90 bp AGAGCAATTAATCTCTTGAACCATTTTTCCTCAGCATCAGCTTTCTCGATAAATAAGCGCCGCAGTCCCTaGGTCGTTTCTTTAGATCAG +
Preference number: 4 (lower is better)
Translates to: RAINLLNHFSSASAFSINKRRSP*VVSLDQ
Trigger: CTGATCTAAAGAAACGACTCAGGGACTGCGGCGCTT...ATTTATCGAGAAAGCTGATGCTGAGGAAAAATGGTTCAAGAGATTAATTGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480119.5
CDS-3UTR TCA 90 bp CTACTAGAGAAAGGTATTCTACAATGGCAGATAGCCTTATCAAAACAATTAGCCAGAAGAGCTACTGCTTaGTCGATGCCTGCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: LLEKGILQWQIALSKQLARRATA*SMPASS
Trigger: AGAAGACGCAGGCATCGATCAAGCAGTAGCTCTTCT...GGCTAATTGTTTTGATAAGGCTATCTGCCATTGTAGAATACCTTTCTCTAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
CDS-3UTR TCA 90 bp CCTAAAAGTCCTATCTCTGGCATGTTTAGTATGGAACGTATAGTTGATTGTCATTTTCCCTCGACCCCTTaGACGACTTCGACTTCGTTT +
Preference number: 4 (lower is better)
Translates to: PKSPISGMFSMERIVDCHFPSTP*TTSTSF
Trigger: AAACGAAGTCGAAGTCGTTCAAGGGGTCGAGGGAAA...ATGACAATCAACTATACGTTCCATACTAAACATGCCAGAGATAGGACTTTTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
CDS-3UTR TCA 90 bp CTACTAGAGAAAGGTATTCTACAATGGCAGATAGCCTTATCAAAACAATTAGCCTCACTGCTACGACTATaGGAACGGAGACGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: LLEKGILQWQIALSKQLASLLRL*ERRRGL
Trigger: AAGACCTCGTCTCCGTTCTCATAGTCGTAGCAGTGA...GGCTAATTGTTTTGATAAGGCTATCTGCCATTGTAGAATACCTTTCTCTAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611884.5
CDS-3UTR TCA 90 bp TCCACAGGGAATAGCAGTGGGGTAAGTAAGACTGAAGTGAGAGCTCTTATCAGTTCTAAAACAATGAGCTaGGATCTGCTAACATGTTGT +
Preference number: 4 (lower is better)
Translates to: STGNSSGVSKTEVRALISSKTMS*DLLTCC
Trigger: ACAACATGTTAGCAGATCTCAGCTCATTGTTTTAGA...ACTGATAAGAGCTCTCACTTCAGTCTTACTTACCCCACTGCTATTCCCTGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
CDS-3UTR CCA 90 bp AAACGGGAAATATTCATGTCAGCTGTTAAAAACCAGTTTTGTAAAGCAAGGCCTTCTACCAGGGTGGCTTaGTCTTCCTCCTTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: KREIFMSAVKNQFCKARPSTRVA*SSSFLL
Trigger: GAGAAGAAAGGAGGAAGACCAAGCCACCCTGGTAGA...AGGCCTTGCTTTACAAAACTGGTTTTTAACAGCTGACATGAATATTTCCCGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
CDS-3UTR TCA 90 bp AGAGCAATTAATCTCTTGAACCATTTTTCCTCAGCATCAGCTTTCTCGATAAATAGAAGAGCTACTGCTTaGTCGATGCCTGCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: RAINLLNHFSSASAFSINRRATA*SMPASS
Trigger: AGAAGACGCAGGCATCGATCAAGCAGTAGCTCTTCT...ATTTATCGAGAAAGCTGATGCTGAGGAAAAATGGTTCAAGAGATTAATTGCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480119.5
CDS-3UTR TCA 90 bp AGAGCAATTAATCTCTTGAACCATTTTTCCTCAGCATCAGCTTTCTCGATAAATTTTCCCTCGACCCCTTaGACGACTTCGACTTCGTTT +
Preference number: 4 (lower is better)
Translates to: RAINLLNHFSSASAFSINFPSTP*TTSTSF
Trigger: AAACGAAGTCGAAGTCGTTCAAGGGGTCGAGGGAAA...ATTTATCGAGAAAGCTGATGCTGAGGAAAAATGGTTCAAGAGATTAATTGCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480119.5
CDS-3UTR TCA 90 bp AGAGCAATTAATCTCTTGAACCATTTTTCCTCAGCATCAGCTTTCTCGATAAATTCACTGCTACGACTATaGGAACGGAGACGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: RAINLLNHFSSASAFSINSLLRL*ERRRGL
Trigger: AAGACCTCGTCTCCGTTCTCATAGTCGTAGCAGTGA...ATTTATCGAGAAAGCTGATGCTGAGGAAAAATGGTTCAAGAGATTAATTGCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480119.5
CDS-3UTR TCA 90 bp CTACAATGGCAGATAGCCTTATCAAAACAATTAGCCGGCTTTCTCCACAGGGAAGAGCAATTAATCTCTTaGACCATTTTTCCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: LQWQIALSKQLAGFLHREEQLIS*TIFPQH
Trigger: ATGCTGAGGAAAAATGGTTCAAGAGATTAATTGCTC...TTCCCTGTGGAGAAAGCCGGCTAATTGTTTTGATAAGGCTATCTGCCATTGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
CDS-3UTR GCA 90 bp CTACAATGGCAGATAGCCTTATCAAAACAATTAGCCGGCTTTCTCCACAGGGAATTTTCTCTTTATCTCTaGCCTTACGTCGTTCTCTAT +
Preference number: 4 (lower is better)
Translates to: LQWQIALSKQLAGFLHREFSLYL*PYVVLY
Trigger: ATAGAGAACGACGTAAGGGCAGAGATAAAGAGAAAA...TTCCCTGTGGAGAAAGCCGGCTAATTGTTTTGATAAGGCTATCTGCCATTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611884.5
CDS-3UTR GCA 90 bp CTACTAGAGAAAGGTATTCTACAATGGCAGATAGCCTTATCAAAACAATTAGCCTGCTTCATCAGCTTTTaGAGCAGCTTCAAGAACCAG +
Preference number: 4 (lower is better)
Translates to: LLEKGILQWQIALSKQLACFISF*SSFKNQ
Trigger: CTGGTTCTTGAAGCTGCTGCAAAAGCTGATGAAGCA...GGCTAATTGTTTTGATAAGGCTATCTGCCATTGTAGAATACCTTTCTCTAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
CDS-3UTR TCA 90 bp CTACTAGAGAAAGGTATTCTACAATGGCAGATAGCCTTATCAAAACAATTAGCCGCATCTAGTAGAAGCTaGTCTCTAAGCAAAATCACC +
Preference number: 4 (lower is better)
Translates to: LLEKGILQWQIALSKQLAASSRS*SLSKIT
Trigger: GGTGATTTTGCTTAGAGATCAGCTTCTACTAGATGC...GGCTAATTGTTTTGATAAGGCTATCTGCCATTGTAGAATACCTTTCTCTAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
CDS-3UTR CCA 90 bp ATGGAACGTATAGTTGATTGTCATTCAGCTACTAGAGAAAGGTATTCTACAATGAAATGTCCTATATGTTaGCAGTCCTACCCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: MERIVDCHSATRERYSTMKCPIC*QSYPED
Trigger: GTCTTCAGGGTAGGACTGCCAACATATAGGACATTT...CATTGTAGAATACCTTTCTCTAGTAGCTGAATGACAATCAACTATACGTTCCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
CDS-3UTR GCA 90 bp ATGGAACGTATAGTTGATTGTCATTCAGCTACTAGAGAAAGGTATTCTACAATGTGCTTGATCGATGCCTaGGTCTTCTATCATAAGAAT +
Preference number: 4 (lower is better)
Translates to: MERIVDCHSATRERYSTMCLIDA*VFYHKN
Trigger: ATTCTTATGATAGAAGACGCAGGCATCGATCAAGCA...CATTGTAGAATACCTTTCTCTAGTAGCTGAATGACAATCAACTATACGTTCCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
CDS-3UTR GCA 90 bp AGAGCAATTAATCTCTTGAACCATTTTTCCTCAGCATCAGCTTTCTCGATAAATTGCTTGATCGATGCCTaGGTCTTCTATCATAAGAAT +
Preference number: 4 (lower is better)
Translates to: RAINLLNHFSSASAFSINCLIDA*VFYHKN
Trigger: ATTCTTATGATAGAAGACGCAGGCATCGATCAAGCA...ATTTATCGAGAAAGCTGATGCTGAGGAAAAATGGTTCAAGAGATTAATTGCTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480119.5
CDS-3UTR GCA 90 bp AAACGGGAAATATTCATGTCAGCTGTTAAAAACCAGTTTTGTAAAGCAAGGCCTTTAACATGCACATTCTaGTTACATTGTTTAGGGTGC +
Preference number: 4 (lower is better)
Translates to: KREIFMSAVKNQFCKARPLTCTF*LHCLGC
Trigger: GCACCCTAAACAATGTAAGCAGAATGTGCATGTTAA...AGGCCTTGCTTTACAAAACTGGTTTTTAACAGCTGACATGAATATTTCCCGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
CDS-3UTR TCA 90 bp ATGGAACGTATAGTTGATTGTCATTCAGCTACTAGAGAAAGGTATTCTACAATGGAGCAATTAATCTCTTaGACCATTTTTCCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: MERIVDCHSATRERYSTMEQLIS*TIFPQH
Trigger: ATGCTGAGGAAAAATGGTTCAAGAGATTAATTGCTC...CATTGTAGAATACCTTTCTCTAGTAGCTGAATGACAATCAACTATACGTTCCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
CDS-3UTR TCA 90 bp AGAGCAATTAATCTCTTGAACCATTTTTCCTCAGCATCAGCTTTCTCGATAAATGAGCAATTAATCTCTTaGACCATTTTTCCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: RAINLLNHFSSASAFSINEQLIS*TIFPQH
Trigger: ATGCTGAGGAAAAATGGTTCAAGAGATTAATTGCTC...ATTTATCGAGAAAGCTGATGCTGAGGAAAAATGGTTCAAGAGATTAATTGCTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000480119.5
CDS-3UTR GCA 90 bp AGAGCAATTAATCTCTTGAACCATTTTTCCTCAGCATCAGCTTTCTCGATAAATTTTTCTCTTTATCTCTaGCCTTACGTCGTTCTCTAT +
Preference number: 4 (lower is better)
Translates to: RAINLLNHFSSASAFSINFSLYL*PYVVLY
Trigger: ATAGAGAACGACGTAAGGGCAGAGATAAAGAGAAAA...ATTTATCGAGAAAGCTGATGCTGAGGAAAAATGGTTCAAGAGATTAATTGCTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000480119.5
CDS TCA 90 bp AGTCGGCGAACTCTCCGACATGTCCTCAAGACAGAAGGCCAAGCTTaGGGCCTGCGGCCACCCACCCACCCTACAGCCACCAGCCTTGAC +
Preference number: 5 (lower is better)
Translates to: SRRTLRHVLKTEGQA*GLRPPTHPTATSLD
Trigger: GTCAAGGCTGGTGGCTGTAGGGTGGGTGGGTGGCCGCAGGCCTCAAGCTTGGCCTTCTGTCTTGAGGACATGTCGGAGAGTTCGCCGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683137.1
CDS GCA 90 bp GAACTCTCCGACATGTCCTCAAGACAGAAGGCCAAGCTTGAGGCCTaGGGCCACCCACCCACCCTACAGCCACCAGCCTTGACCCAAGGA +
Preference number: 5 (lower is better)
Translates to: ELSDMSSRQKAKLEA*GHPPTLQPPALTQG
Trigger: TCCTTGGGTCAAGGCTGGTGGCTGTAGGGTGGGTGGGTGGCCGCAGGCCTCAAGCTTGGCCTTCTGTCTTGAGGACATGTCGGAGAGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683137.1
CDS-3UTR CAA 90 bp TTCTCTTTATCTCTGCCCTTACGTCGTTCTCTATCCCGAGACCGACTACGCGTTAAGAAGAGCTACTGCTaGATCGATGCCTGCGTCTTC +
Preference number: 5 (lower is better)
Translates to: FSLSLPLRRSLSRDRLRVKKSYC*IDACVF
Trigger: GAAGACGCAGGCATCGATCAAGCAGTAGCTCTTCTT...AACGCGTAGTCGGTCTCGGGATAGAGAACGACGTAAGGGCAGAGATAAAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477788.5
CDS TCA 90 bp CCATTTCTAGAGCTAGTGAGGAAGCGCCAGGCTTATATTGCAAGATaGGCCAGGAAACCCAAAAGCAGCTATGAAGAACCAGGAACGTGG +
Preference number: 5 (lower is better)
Translates to: PFLELVRKRQAYIAR*ARKPKSSYEEPGTW
Trigger: CCACGTTCCTGGTTCTTCATAGCTGCTTTTGGGTTTCCTGGCTCATCTTGCAATATAAGCCTGGCGCTTCCTCACTAGCTCTAGAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683137.1
CDS GCA 90 bp CATGAGGGAAGACCCACCTTCCATAAAGGTCCCACCTCCCAACACTaGCGCAATTTGGATCAAGTTTCCAACACAAAAACTTTGGGAGAC +
Preference number: 5 (lower is better)
Translates to: HEGRPTFHKGPTSQH*RNLDQVSNTKTLGD
Trigger: GTCTCCCAAAGTTTTTGTGTTGGAAACTTGATCCAAATTGCGGCAGTGTTGGGAGGTGGGACCTTTATGGAAGGTGGGTCTTCCCTCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683394.1
CDS TCA 90 bp CCACACAGCTTGGTGTCAGACAACAGCTATCACACAGCCCTGCTTTaGTCCAAACAGACACTTAAAAGGAGTTCTAAGCATGCTCTGCAC +
Preference number: 5 (lower is better)
Translates to: PHSLVSDNSYHTALL*SKQTLKRSSKHALH
Trigger: GTGCAGAGCATGCTTAGAACTCCTTTTAAGTGTCTGTTTGGATCAAAGCAGGGCTGTGTGATAGCTGTTGTCTGACACCAAGCTGTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683394.1
CDS-3UTR CAA 90 bp TCCACAGGGAATAGCAGTGGGGTAAGTAAGACTGAAGTGAGAGCTCTTATCAGTTTCTACCAGGGTGGCTaGGTCTTCCTCCTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: STGNSSGVSKTEVRALISFYQGG*VFLLSS
Trigger: AGAAGAAAGGAGGAAGACCAAGCCACCCTGGTAGAA...ACTGATAAGAGCTCTCACTTCAGTCTTACTTACCCCACTGCTATTCCCTGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
CDS GCA 90 bp CAACACCACACAGCTTGGTGTCAGACAACAGCTATCACACAGCCCTaGTTTGATCCAAACAGACACTTAAAAGGAGTTCTAAGCATGCTC +
Preference number: 5 (lower is better)
Translates to: QHHTAWCQTTAITQP*FDPNRHLKGVLSML
Trigger: GAGCATGCTTAGAACTCCTTTTAAGTGTCTGTTTGGATCAAAGCAGGGCTGTGTGATAGCTGTTGTCTGACACCAAGCTGTGTGGTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683394.1
CDS CCA 90 bp AAGACGTTGGCCATCATTTCATCTAACCTTCAGAGTACAGACAGATaGACTGAGGCCCAAAGGACTCAAGTGGCATTCCCAAGTCAACTA +
Preference number: 5 (lower is better)
Translates to: KTLAIISSNLQSTDR*TEAQRTQVAFPSQL
Trigger: TAGTTGACTTGGGAATGCCACTTGAGTCCTTTGGGCCTCAGTCCATCTGTCTGTACTCTGAAGGTTAGATGAAATGATGGCCAACGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684512.1
CDS-3UTR CAA 90 bp TTTATCTCTGCCCTTACGTCGTTCTCTATCCCGAGACCGACTACGCGTTCTTCTCCAGATTCCCCACGTTaGATGTTATGTAATTCCTTG +
Preference number: 5 (lower is better)
Translates to: FISALTSFSIPRPTTRSSPDSPR*MLCNSL
Trigger: CAAGGAATTACATAACATCAAACGTGGGGAATCTGG...AGAAGAACGCGTAGTCGGTCTCGGGATAGAGAACGACGTAAGGGCAGAGATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477788.5
CDS CCA 90 bp GACCCACCTTCCATAAAGGTCCCACCTCCCAACACTGCCGCAATTTaGATCAAGTTTCCAACACAAAAACTTTGGGAGACATATTCAAAC +
Preference number: 5 (lower is better)
Translates to: DPPSIKVPPPNTAAI*IKFPTQKLWETYSN
Trigger: GTTTGAATATGTCTCCCAAAGTTTTTGTGTTGGAAACTTGATCCAAATTGCGGCAGTGTTGGGAGGTGGGACCTTTATGGAAGGTGGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683394.1
CDS CCA 90 bp GTTGGCTTTCGGTACGGCGTCAGAAGAACAAATTTGGAAAGACGTTaGCCATCATTTCATCTAACCTTCAGAGTACAGACAGATGGACTG +
Preference number: 5 (lower is better)
Translates to: VGFRYGVRRTNLERR*PSFHLTFRVQTDGL
Trigger: CAGTCCATCTGTCTGTACTCTGAAGGTTAGATGAAATGATGGCCAACGTCTTTCCAAATTTGTTCTTCTGACGCCGTACCGAAAGCCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684512.1
CDS-3UTR CAA 90 bp AAACGGGAAATATTCATGTCAGCTGTTAAAAACCAGTTTTGTAAAGCAAGGCCTCGACGTCCCATTTCTTaGGGCTCACACCTCCCGTTG +
Preference number: 5 (lower is better)
Translates to: KREIFMSAVKNQFCKARPRRPIS*GSHLPL
Trigger: CAACGGGAGGTGTGAGCCCAAAGAAATGGGACGTCG...AGGCCTTGCTTTACAAAACTGGTTTTTAACAGCTGACATGAATATTTCCCGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464171.5
CDS-3UTR CAA 90 bp AGAGCAATTAATCTCTTGAACCATTTTTCCTCAGCATCAGCTTTCTCGATAAATCGACGTCCCATTTCTTaGGGCTCACACCTCCCGTTG +
Preference number: 5 (lower is better)
Translates to: RAINLLNHFSSASAFSINRRPIS*GSHLPL
Trigger: CAACGGGAGGTGTGAGCCCAAAGAAATGGGACGTCG...ATTTATCGAGAAAGCTGATGCTGAGGAAAAATGGTTCAAGAGATTAATTGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480119.5
CDS-3UTR CAA 90 bp TTTATCTCTGCCCTTACGTCGTTCTCTATCCCGAGACCGACTACGCGTTCTTCTATGTTATGTAATTCCTaGTCCTTCCCTTTATCCTTC +
Preference number: 5 (lower is better)
Translates to: FISALTSFSIPRPTTRSSMLCNS*SFPLSF
Trigger: GAAGGATAAAGGGAAGGACAAGGAATTACATAACAT...AGAAGAACGCGTAGTCGGTCTCGGGATAGAGAACGACGTAAGGGCAGAGATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477788.5
CDS-3UTR CAA 90 bp TCCACAGGGAATAGCAGTGGGGTAAGTAAGACTGAAGTGAGAGCTCTTATCAGTCCAGATTCCCCACGTTaGATGTTATGTAATTCCTTG +
Preference number: 5 (lower is better)
Translates to: STGNSSGVSKTEVRALISPDSPR*MLCNSL
Trigger: CAAGGAATTACATAACATCAAACGTGGGGAATCTGG...ACTGATAAGAGCTCTCACTTCAGTCTTACTTACCCCACTGCTATTCCCTGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611884.5
CDS-3UTR CAA 90 bp CTACAATGGCAGATAGCCTTATCAAAACAATTAGCCGGCTTTCTCCACAGGGAAATGCTTCATCAGCTTTaGCAGCAGCTTCAAGAACCA +
Preference number: 5 (lower is better)
Translates to: LQWQIALSKQLAGFLHREMLHQL*QQLQEP
Trigger: TGGTTCTTGAAGCTGCTGCAAAAGCTGATGAAGCAT...TTCCCTGTGGAGAAAGCCGGCTAATTGTTTTGATAAGGCTATCTGCCATTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
CDS-3UTR CAA 90 bp CTACAATGGCAGATAGCCTTATCAAAACAATTAGCCGGCTTTCTCCACAGGGAACTCCATCATAGGTATTaGGCCAACTGGTTAGGTCTA +
Preference number: 5 (lower is better)
Translates to: LQWQIALSKQLAGFLHRELHHRY*ANWLGL
Trigger: TAGACCTAACCAGTTGGCCAAATACCTATGATGGAG...TTCCCTGTGGAGAAAGCCGGCTAATTGTTTTGATAAGGCTATCTGCCATTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
CDS GCA 90 bp TTCTACCAGGGTGGCTTGGTCTTTACCTTCCTCCTTTCTTCTCTTTaGTTCTTCCTCATTTCTTTCTTTGGCTTTCAATGCTTCATCAGC +
Preference number: 5 (lower is better)
Translates to: FYQGGLVFTFLLSSL*FFLISFFGFQCFIS
Trigger: GCTGATGAAGCATTGAAAGCCAAAGAAAGAAATGAGGAAGAAGCAAAGAGAAGAAAGGAGGAAGGTAAAGACCAAGCCACCCTGGTAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476899.6
CDS-3UTR CAA 90 bp AAACGGGAAATATTCATGTCAGCTGTTAAAAACCAGTTTTGTAAAGCAAGGCCTAACGGAGACGAGGTCTaGACCTGGACCTTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: KREIFMSAVKNQFCKARPNGDEV*TWTFLF
Trigger: GAACAAGAAGGTCCAGGTCAAGACCTCGTCTCCGTT...AGGCCTTGCTTTACAAAACTGGTTTTTAACAGCTGACATGAATATTTCCCGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611884.5
CDS TCA 90 bp ACAGCTCACACTAACTGGATTTTCACAGCTCCCTATCATTCAGCTTaGATTCCTCATGGGCAGATTAAAAGGACCAAGGCAAACAATAGT +
Preference number: 5 (lower is better)
Translates to: TAHTNWIFTAPYHSA*IPHGQIKRTKANNS
Trigger: ACTATTGTTTGCCTTGGTCCTTTTAATCTGCCCATGAGGAATTCAAGCTGAATGATAGGGAGCTGTGAAAATCCAGTTAGTGTGAGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684512.1
CDS GCA 90 bp ACATCCAGCAGTCACTGTGATTTAATCTTGCCATATGGAAGATATTaGTTGGGTTACTGCAGCCTCCCCTTTATAGGTTTCTGTAGTCAT +
Preference number: 5 (lower is better)
Translates to: TSSSHCDLILPYGRY*LGYCSLPFIGFCSH
Trigger: ATGACTACAGAAACCTATAAAGGGGAGGCTGCAGTAACCCAAGCAATATCTTCCATATGGCAAGATTAAATCACAGTGACTGCTGGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684512.1
CDS CCA 90 bp GGACTGAGGCCCAAAGGACTCAAGTGGCATTCCCAAGTCAACTATTaGCAGACTATCAAAGTAACTATGTATGAGTATTTCAAGTTCCTT +
Preference number: 5 (lower is better)
Translates to: GLRPKGLKWHSQVNY*QTIKVTMYEYFKFL
Trigger: AAGGAACTTGAAATACTCATACATAGTTACTTTGATAGTCTGCCAATAGTTGACTTGGGAATGCCACTTGAGTCCTTTGGGCCTCAGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684512.1
CDS-3UTR CAA 90 bp CCTAAAAGTCCTATCTCTGGCATGTTTAGTATGGAACGTATAGTTGATTGTCATAAGAAGAGCTACTGCTaGATCGATGCCTGCGTCTTC +
Preference number: 5 (lower is better)
Translates to: PKSPISGMFSMERIVDCHKKSYC*IDACVF
Trigger: GAAGACGCAGGCATCGATCAAGCAGTAGCTCTTCTT...ATGACAATCAACTATACGTTCCATACTAAACATGCCAGAGATAGGACTTTTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
CDS-3UTR CAA 90 bp AGAGCAATTAATCTCTTGAACCATTTTTCCTCAGCATCAGCTTTCTCGATAAATAACGGAGACGAGGTCTaGACCTGGACCTTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: RAINLLNHFSSASAFSINNGDEV*TWTFLF
Trigger: GAACAAGAAGGTCCAGGTCAAGACCTCGTCTCCGTT...ATTTATCGAGAAAGCTGATGCTGAGGAAAAATGGTTCAAGAGATTAATTGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480119.5
CDS-3UTR CAA 90 bp CCTAAAAGTCCTATCTCTGGCATGTTTAGTATGGAACGTATAGTTGATTGTCATTTCTACCAGGGTGGCTaGGTCTTCCTCCTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: PKSPISGMFSMERIVDCHFYQGG*VFLLSS
Trigger: AGAAGAAAGGAGGAAGACCAAGCCACCCTGGTAGAA...ATGACAATCAACTATACGTTCCATACTAAACATGCCAGAGATAGGACTTTTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
CDS-3UTR CAA 90 bp TCCACAGGGAATAGCAGTGGGGTAAGTAAGACTGAAGTGAGAGCTCTTATCAGTAGAGCAATTAATCTCTaGAACCATTTTTCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: STGNSSGVSKTEVRALISRAINL*NHFSSA
Trigger: TGCTGAGGAAAAATGGTTCAAGAGATTAATTGCTCT...ACTGATAAGAGCTCTCACTTCAGTCTTACTTACCCCACTGCTATTCCCTGTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
CDS TCA 90 bp CTGCTCATTATTAGCGGTAAGTGCACTCATAGTTTAAGCCAGAAATaGCAAATAACAACTCTTGAGCCAAATCCAGCCAGACACCCATTT +
Preference number: 5 (lower is better)
Translates to: LLIISGKCTHSLSQK*QITTLEPNPARHPF
Trigger: AAATGGGTGTCTGGCTGGATTTGGCTCAAGAGTTGTTATTTGTCATTTCTGGCTTAAACTATGAGTGCACTTACCGCTAATAATGAGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683394.1
CDS GCA 90 bp AGCTTTAGAAACATCATACTGATCAGGATAATTCATTTCATTCCTTaGCAAAGGGGGCATAGCACAGCTGTCCTTCTTTCAAGCCAGAAA +
Preference number: 5 (lower is better)
Translates to: SFRNIILIRIIHFIP*QRGHSTAVLLSSQK
Trigger: TTTCTGGCTTGAAAGAAGGACAGCTGTGCTATGCCCCCTTTGGCAAGGAATGAAATGAATTATCCTGATCAGTATGATGTTTCTAAAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496268.1
CDS CCA 90 bp TACCTTCCTCCTTTCTTCTCTTTGCTTCTTCCTCATTTCTTTCTTTaGCTTTCAATGCTTCATCAGCTTTTGCAGCAGCTTCAAGAACCA +
Preference number: 5 (lower is better)
Translates to: YLPPFFSLLLPHFFL*LSMLHQLLQQLQEP
Trigger: TGGTTCTTGAAGCTGCTGCAAAAGCTGATGAAGCATTGAAAGCCAAAGAAAGAAATGAGGAAGAAGCAAAGAGAAGAAAGGAGGAAGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471911.5
ENST00000476899.6
ENST00000683831.1
ENST00000684683.1
CDS CCA 90 bp CTACTTCCTCCTTTCTTCTCTTTGCTTCTTCCTCATTTCTTTCTTTaGCTTTCAATGCTTCATCAGCTTTTGCAGCAGCTTCAAGAACCA +
Preference number: 5 (lower is better)
Translates to: LLPPFFSLLLPHFFL*LSMLHQLLQQLQEP
Trigger: TGGTTCTTGAAGCTGCTGCAAAAGCTGATGAAGCATTGAAAGCCAAAGAAAGAAATGAGGAAGAAGCAAAGAGAAGAAAGGAGGAAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683516.1
CDS-3UTR CAA 90 bp AGAGCAATTAATCTCTTGAACCATTTTTCCTCAGCATCAGCTTTCTCGATAAATAAGAAGAGCTACTGCTaGATCGATGCCTGCGTCTTC +
Preference number: 5 (lower is better)
Translates to: RAINLLNHFSSASAFSINKKSYC*IDACVF
Trigger: GAAGACGCAGGCATCGATCAAGCAGTAGCTCTTCTT...ATTTATCGAGAAAGCTGATGCTGAGGAAAAATGGTTCAAGAGATTAATTGCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480119.5
CDS-3UTR CAA 90 bp CTACTAGAGAAAGGTATTCTACAATGGCAGATAGCCTTATCAAAACAATTAGCCATGCTTCATCAGCTTTaGCAGCAGCTTCAAGAACCA +
Preference number: 5 (lower is better)
Translates to: LLEKGILQWQIALSKQLAMLHQL*QQLQEP
Trigger: TGGTTCTTGAAGCTGCTGCAAAAGCTGATGAAGCAT...GGCTAATTGTTTTGATAAGGCTATCTGCCATTGTAGAATACCTTTCTCTAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
CDS-3UTR CAA 90 bp CCTAAAAGTCCTATCTCTGGCATGTTTAGTATGGAACGTATAGTTGATTGTCATCTCCATCATAGGTATTaGGCCAACTGGTTAGGTCTA +
Preference number: 5 (lower is better)
Translates to: PKSPISGMFSMERIVDCHLHHRY*ANWLGL
Trigger: TAGACCTAACCAGTTGGCCAAATACCTATGATGGAG...ATGACAATCAACTATACGTTCCATACTAAACATGCCAGAGATAGGACTTTTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
CDS-3UTR CAA 90 bp CCTAAAAGTCCTATCTCTGGCATGTTTAGTATGGAACGTATAGTTGATTGTCATGGTTCCACTGACTTTTaGACTTCTTTACTTGATCTG +
Preference number: 5 (lower is better)
Translates to: PKSPISGMFSMERIVDCHGSTDF*TSLLDL
Trigger: CAGATCAAGTAAAGAAGTCAAAAAGTCAGTGGAACC...ATGACAATCAACTATACGTTCCATACTAAACATGCCAGAGATAGGACTTTTAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
CDS TCA 90 bp GCCTGTCTTAGAAAAGCCCTTAACAAAGTTGGGTTATACTTTCAATaGGATTATTTGGAATCCCGTTGCAAGCTCAAAATAAGCTACTTA +
Preference number: 5 (lower is better)
Translates to: ACLRKALNKVGLYFQ*DYLESRCKLKISYL
Trigger: TAAGTAGCTTATTTTGAGCTTGCAACGGGATTCCAAATAATCTCATTGAAAGTATAACCCAACTTTGTTAAGGGCTTTTCTAAGACAGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683831.1
CDS-3UTR CAA 90 bp AAACGGGAAATATTCATGTCAGCTGTTAAAAACCAGTTTTGTAAAGCAAGGCCTATGTTATGTAATTCCTaGTCCTTCCCTTTATCCTTC +
Preference number: 5 (lower is better)
Translates to: KREIFMSAVKNQFCKARPMLCNS*SFPLSF
Trigger: GAAGGATAAAGGGAAGGACAAGGAATTACATAACAT...AGGCCTTGCTTTACAAAACTGGTTTTTAACAGCTGACATGAATATTTCCCGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611884.5
CDS-3UTR CAA 90 bp CCTAAAAGTCCTATCTCTGGCATGTTTAGTATGGAACGTATAGTTGATTGTCATAGAGCAATTAATCTCTaGAACCATTTTTCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: PKSPISGMFSMERIVDCHRAINL*NHFSSA
Trigger: TGCTGAGGAAAAATGGTTCAAGAGATTAATTGCTCT...ATGACAATCAACTATACGTTCCATACTAAACATGCCAGAGATAGGACTTTTAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464171.5
ENST00000611884.5
CDS-3UTR CAA 90 bp AGAGCAATTAATCTCTTGAACCATTTTTCCTCAGCATCAGCTTTCTCGATAAATCCTCTCACAATTCTTTaGGTGAAATCCACGTTTGAT +
Preference number: 5 (lower is better)
Translates to: RAINLLNHFSSASAFSINPLTIL*VKSTFD
Trigger: ATCAAACGTGGATTTCACCAAAAGAATTGTGAGAGG...ATTTATCGAGAAAGCTGATGCTGAGGAAAAATGGTTCAAGAGATTAATTGCTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480119.5
CDS GCA 90 bp CTGTTTCATTTTGCAAAGACTATGGTGAAGTATAGTATAAGACTTTaGATGGTATTAACTAATCCATCTTCAGCTTCTGATTCCACAGAC +
Preference number: 5 (lower is better)
Translates to: LFHFAKTMVKYSIRL*MVLTNPSSASDSTD
Trigger: GTCTGTGGAATCAGAAGCTGAAGATGGATTAGTTAATACCATGCAAAGTCTTATACTATACTTCACCATAGTCTTTGCAAAATGAAACAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471911.5
CDS-3UTR CAA 90 bp AGAGCAATTAATCTCTTGAACCATTTTTCCTCAGCATCAGCTTTCTCGATAAATATGTTATGTAATTCCTaGTCCTTCCCTTTATCCTTC +
Preference number: 5 (lower is better)
Translates to: RAINLLNHFSSASAFSINMLCNS*SFPLSF
Trigger: GAAGGATAAAGGGAAGGACAAGGAATTACATAACAT...ATTTATCGAGAAAGCTGATGCTGAGGAAAAATGGTTCAAGAGATTAATTGCTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480119.5
CDS-3UTR CAA 90 bp AGAGCAATTAATCTCTTGAACCATTTTTCCTCAGCATCAGCTTTCTCGATAAATAGAGCAATTAATCTCTaGAACCATTTTTCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: RAINLLNHFSSASAFSINRAINL*NHFSSA
Trigger: TGCTGAGGAAAAATGGTTCAAGAGATTAATTGCTCT...ATTTATCGAGAAAGCTGATGCTGAGGAAAAATGGTTCAAGAGATTAATTGCTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000480119.5
CDS GCA 72 bp CGATCACGTACCGGGAGGTGCTGGAGAGCGGGCCGCTaGGCGGGGCCAAGGAGCCGACCGGCTGCACCGAGG +
Preference number: 6 (lower is better)
Translates to: RSRTGRCWRAGR*AGPRSRPAAPR
Trigger: CCTCGGTGCAGCCGGTCGGCTCCTTGGCCCCGCGCAGCGGCCCGCTCTCCAGCACCTCCCGGTACGTGATCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480820.5
CDS CCA 72 bp AGGAAACCCAAAAGCAGCTATGAAGAACCAGGAACGTaGGGCGAGGGGAGGAGTCGGCGAACTCTCCGACAT +
Preference number: 6 (lower is better)
Translates to: RKPKSSYEEPGT*GEGRSRRTLRH
Trigger: ATGTCGGAGAGTTCGCCGACTCCTCCCCTCGCCCCACGTTCCTGGTTCTTCATAGCTGCTTTTGGGTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683137.1
CDS CCA 72 bp TACTATCTAGCCCAATCTTCTCCAACTTGCAGCCCGTaGGCCACATGCAGCCCAGGACAGCTTCGAATGTGG +
Preference number: 6 (lower is better)
Translates to: YYLAQSSPTCSP*ATCSPGQLRMW
Trigger: CCACATTCGAAGCTGTCCTGGGCTGCATGTGGCCCACGGGCTGCAAGTTGGAGAAGATTGGGCTAGATAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683394.1
CDS TCA 72 bp AGACCTCTGAACTCTATAGGATTTCCCTCGACCCCTTaGACGACTTCGACTTCGTTTCCTTCTGGAGCCATA +
Preference number: 6 (lower is better)
Translates to: RPLNSIGFPSTP*TTSTSFPSGAI
Trigger: TATGGCTCCAGAAGGAAACGAAGTCGAAGTCGTTCAAGGGGTCGAGGGAAATCCTATAGAGTTCAGAGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 25 transcripts:
ENST00000295930.7
ENST00000312179.10
ENST00000464171.5
ENST00000468344.5
ENST00000471911.5
ENST00000471994.5
ENST00000475278.6
ENST00000476899.6
ENST00000477788.5
ENST00000480119.5
ENST00000480820.5
ENST00000482822.3
ENST00000494002.5
ENST00000611884.5
ENST00000682164.1
ENST00000682221.1
ENST00000682500.1
ENST00000683137.1
ENST00000683394.1
ENST00000683516.1
ENST00000683831.1
ENST00000683899.1
ENST00000684156.1
ENST00000684512.1
ENST00000684683.1
CDS TCA 72 bp GAGCTAGTGAGGAAGCGCCAGGCTTATATTGCAAGATaGGCCAGGAAACCCAAAAGCAGCTATGAAGAACCA +
Preference number: 6 (lower is better)
Translates to: ELVRKRQAYIAR*ARKPKSSYEEP
Trigger: TGGTTCTTCATAGCTGCTTTTGGGTTTCCTGGCTCATCTTGCAATATAAGCCTGGCGCTTCCTCACTAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683137.1
CDS CAA 72 bp TCTAAACCAAGCCCCACTAGACTTCAGTCCCTCAAATaGTACCACACACATCCTGATGCCTCCAAGCCTTTC +
Preference number: 6 (lower is better)
Translates to: SKPSPTRLQSLK*YHTHPDASKPF
Trigger: GAAAGGCTTGGAGGCATCAGGATGTGTGTGGTACAATTTGAGGGACTGAAGTCTAGTGGGGCTTGGTTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683394.1
CDS CAA 72 bp CTTCTTCTTCCAGTGTGGCCCAGGGAAGCCAGAAGATaGGATACCCCTAATCTAGCCCTTTACAAAAGTTTG +
Preference number: 6 (lower is better)
Translates to: LLLPVWPREARR*DTPNLALYKSL
Trigger: CAAACTTTTGTAAAGGGCTAGATTAGGGGTATCCAATCTTCTGGCTTCCCTGGGCCACACTGGAAGAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683394.1
CDS CAA 72 bp GCATCCAAAGTAATCCATGGCACAATGCATTTATCTTaGTTGTGGCCCATGGGTCACATCCAGCAGTCACTG +
Preference number: 6 (lower is better)
Translates to: ASKVIHGTMHLS*LWPMGHIQQSL
Trigger: CAGTGACTGCTGGATGTGACCCATGGGCCACAACAAAGATAAATGCATTGTGCCATGGATTACTTTGGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684512.1
CDS TCA 72 bp TTGTTGTGGCCCATGGGTCACATCCAGCAGTCACTGTaGTTTAATCTTGCCATATGGAAGATATTGCTTGGG +
Preference number: 6 (lower is better)
Translates to: LLWPMGHIQQSL*FNLAIWKILLG
Trigger: CCCAAGCAATATCTTCCATATGGCAAGATTAAATCACAGTGACTGCTGGATGTGACCCATGGGCCACAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684512.1
CDS CCA 72 bp TCCATAAAGGTCCCACCTCCCAACACTGCCGCAATTTaGATCAAGTTTCCAACACAAAAACTTTGGGAGACA +
Preference number: 6 (lower is better)
Translates to: SIKVPPPNTAAI*IKFPTQKLWET
Trigger: TGTCTCCCAAAGTTTTTGTGTTGGAAACTTGATCCAAATTGCGGCAGTGTTGGGAGGTGGGACCTTTATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683394.1
CDS CAA 72 bp CCATGGGTCACATCCAGCAGTCACTGTGATTTAATCTaGCCATATGGAAGATATTGCTTGGGTTACTGCAGC +
Preference number: 6 (lower is better)
Translates to: PWVTSSSHCDLI*PYGRYCLGYCS
Trigger: GCTGCAGTAACCCAAGCAATATCTTCCATATGGCAAGATTAAATCACAGTGACTGCTGGATGTGACCCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684512.1
CDS CAA 90 bp ATCTTCTACTCTAAACCAAGCCCCACTAGACTTCAGTCCCTCAAATaGTACCACACACATCCTGATGCCTCCAAGCCTTTCCATATGAAA +
Preference number: 6 (lower is better)
Translates to: IFYSKPSPTRLQSLK*YHTHPDASKPFHMK
Trigger: TTTCATATGGAAAGGCTTGGAGGCATCAGGATGTGTGTGGTACAATTTGAGGGACTGAAGTCTAGTGGGGCTTGGTTTAGAGTAGAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683394.1
CDS CAA 90 bp AGTTGGCTTTCGGTACGGCGTCAGAAGAACAAATTTGGAAAGACGTaGGCCATCATTTCATCTAACCTTCAGAGTACAGACAGATGGACT +
Preference number: 6 (lower is better)
Translates to: SWLSVRRQKNKFGKT*AIISSNLQSTDRWT
Trigger: AGTCCATCTGTCTGTACTCTGAAGGTTAGATGAAATGATGGCCAACGTCTTTCCAAATTTGTTCTTCTGACGCCGTACCGAAAGCCAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684512.1
CDS GCA 72 bp ACAGCTTGGTGTCAGACAACAGCTATCACACAGCCCTaGTTTGATCCAAACAGACACTTAAAAGGAGTTCTA +
Preference number: 6 (lower is better)
Translates to: TAWCQTTAITQP*FDPNRHLKGVL
Trigger: TAGAACTCCTTTTAAGTGTCTGTTTGGATCAAAGCAGGGCTGTGTGATAGCTGTTGTCTGACACCAAGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683394.1
CDS CAA 72 bp ATACCCCATGTAGACCCAATCACATCATTTCTCTACTaGAAACTCTACATTGGCATCCCACTGCCTCCAGAA +
Preference number: 6 (lower is better)
Translates to: IPHVDPITSFLY*KLYIGIPLPPE
Trigger: TTCTGGAGGCAGTGGGATGCCAATGTAGAGTTTCAAGTAGAGAAATGATGTGATTGGGTCTACATGGGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683394.1
CDS CAA 72 bp TCGGTACGGCGTCAGAAGAACAAATTTGGAAAGACGTaGGCCATCATTTCATCTAACCTTCAGAGTACAGAC +
Preference number: 6 (lower is better)
Translates to: SVRRQKNKFGKT*AIISSNLQSTD
Trigger: GTCTGTACTCTGAAGGTTAGATGAAATGATGGCCAACGTCTTTCCAAATTTGTTCTTCTGACGCCGTACCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684512.1
CDS CAA 72 bp CAAGTTGGCTTTCGGTACGGCGTCAGAAGAACAAATTaGGAAAGACGTTGGCCATCATTTCATCTAACCTTC +
Preference number: 6 (lower is better)
Translates to: QVGFRYGVRRTN*ERRWPSFHLTF
Trigger: GAAGGTTAGATGAAATGATGGCCAACGTCTTTCCAAATTTGTTCTTCTGACGCCGTACCGAAAGCCAACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684512.1
CDS CAA 90 bp GTTCTACCAGGGTGGCTTGGTCTTTACCTTCCTCCTTTCTTCTCTTaGCTTCTTCCTCATTTCTTTCTTTGGCTTTCAATGCTTCATCAG +
Preference number: 6 (lower is better)
Translates to: VLPGWLGLYLPPFFS*LLPHFFLWLSMLHQ
Trigger: CTGATGAAGCATTGAAAGCCAAAGAAAGAAATGAGGAAGAAGCAAAGAGAAGAAAGGAGGAAGGTAAAGACCAAGCCACCCTGGTAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476899.6
CDS CAA 90 bp TTAGGCTTTCAAGTTGGCTTTCGGTACGGCGTCAGAAGAACAAATTaGGAAAGACGTTGGCCATCATTTCATCTAACCTTCAGAGTACAG +
Preference number: 6 (lower is better)
Translates to: LGFQVGFRYGVRRTN*ERRWPSFHLTFRVQ
Trigger: CTGTACTCTGAAGGTTAGATGAAATGATGGCCAACGTCTTTCCAAATTTGTTCTTCTGACGCCGTACCGAAAGCCAACTTGAAAGCCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684512.1
CDS TCA 72 bp ACTAACTGGATTTTCACAGCTCCCTATCATTCAGCTTaGATTCCTCATGGGCAGATTAAAAGGACCAAGGCA +
Preference number: 6 (lower is better)
Translates to: TNWIFTAPYHSA*IPHGQIKRTKA
Trigger: TGCCTTGGTCCTTTTAATCTGCCCATGAGGAATTCAAGCTGAATGATAGGGAGCTGTGAAAATCCAGTTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684512.1
CDS CAA 90 bp CCTACTTCCTCCTTTCTTCTCTTTGCTTCTTCCTCATTTCTTTCTTaGGCTTTCAATGCTTCATCAGCTTTTGCAGCAGCTTCAAGAACC +
Preference number: 6 (lower is better)
Translates to: PTSSFLLFASSSFLS*AFNASSAFAAASRT
Trigger: GGTTCTTGAAGCTGCTGCAAAAGCTGATGAAGCATTGAAAGCCAAAGAAAGAAATGAGGAAGAAGCAAAGAGAAGAAAGGAGGAAGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683516.1
CDS CAA 90 bp TCCAGCAGTCACTGTGATTTAATCTTGCCATATGGAAGATATTGCTaGGGTTACTGCAGCCTCCCCTTTATAGGTTTCTGTAGTCATCAA +
Preference number: 6 (lower is better)
Translates to: SSSHCDLILPYGRYC*GYCSLPFIGFCSHQ
Trigger: TTGATGACTACAGAAACCTATAAAGGGGAGGCTGCAGTAACCCAAGCAATATCTTCCATATGGCAAGATTAAATCACAGTGACTGCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684512.1
CDS GCA 72 bp AACATCATACTGATCAGGATAATTCATTTCATTCCTTaGCAAAGGGGGCATAGCACAGCTGTCCTTCTTTCA +
Preference number: 6 (lower is better)
Translates to: NIILIRIIHFIP*QRGHSTAVLLS
Trigger: TGAAAGAAGGACAGCTGTGCTATGCCCCCTTTGGCAAGGAATGAAATGAATTATCCTGATCAGTATGATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496268.1
CDS CAA 90 bp TTACCTTCCTCCTTTCTTCTCTTTGCTTCTTCCTCATTTCTTTCTTaGGCTTTCAATGCTTCATCAGCTTTTGCAGCAGCTTCAAGAACC +
Preference number: 6 (lower is better)
Translates to: LPSSFLLFASSSFLS*AFNASSAFAAASRT
Trigger: GGTTCTTGAAGCTGCTGCAAAAGCTGATGAAGCATTGAAAGCCAAAGAAAGAAATGAGGAAGAAGCAAAGAGAAGAAAGGAGGAAGGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471911.5
ENST00000476899.6
ENST00000683831.1
ENST00000684683.1
CDS TCA 72 bp ATTAGCGGTAAGTGCACTCATAGTTTAAGCCAGAAATaGCAAATAACAACTCTTGAGCCAAATCCAGCCAGA +
Preference number: 6 (lower is better)
Translates to: ISGKCTHSLSQK*QITTLEPNPAR
Trigger: TCTGGCTGGATTTGGCTCAAGAGTTGTTATTTGTCATTTCTGGCTTAAACTATGAGTGCACTTACCGCTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683394.1
CDS CCA 72 bp CCCAAAGGACTCAAGTGGCATTCCCAAGTCAACTATTaGCAGACTATCAAAGTAACTATGTATGAGTATTTC +
Preference number: 6 (lower is better)
Translates to: PKGLKWHSQVNY*QTIKVTMYEYF
Trigger: GAAATACTCATACATAGTTACTTTGATAGTCTGCCAATAGTTGACTTGGGAATGCCACTTGAGTCCTTTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684512.1
CDS CAA 90 bp CAGAGAAAAATGAACACATGCCTTTACCTTCCTCCTTTCTTCTCTTaGCTTCTTCCTCATTTCTTTCTTTGGCTTTCAATGCTTCATCAG +
Preference number: 6 (lower is better)
Translates to: QRKMNTCLYLPPFFS*LLPHFFLWLSMLHQ
Trigger: CTGATGAAGCATTGAAAGCCAAAGAAAGAAATGAGGAAGAAGCAAAGAGAAGAAAGGAGGAAGGTAAAGGCATGTGTTCATTTTTCTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000684683.1
CDS TCA 72 bp AAAGAATCAGAATGTGCTTTAAGCAAGAATCCCAGGTaGCTCATATGTACATTAAAGATGGTGAAGCACTGC +
Preference number: 6 (lower is better)
Translates to: KESECALSKNPR*LICTLKMVKHC
Trigger: GCAGTGCTTCACCATCTTTAATGTACATATGAGTCACCTGGGATTCTTGCTTAAAGCACATTCTGATTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496268.1
CDS GCA 72 bp ACTTTGGGTTTTACTGAATCTCAGCTTCCATGTAGTTaGTGGGAAGTTCAGATTATCTTCTGGTTGTTACAA +
Preference number: 6 (lower is better)
Translates to: TLGFTESQLPCS*WEVQIIFWLLQ
Trigger: TTGTAACAACCAGAAGATAATCTGAACTTCCCAGCAACTACATGGAAGCTGAGATTCAGTAAAACCCAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000683516.1
ENST00000683831.1
ENST00000684683.1
CDS CAA 72 bp ATAGTGGGCATCTTCTGTCACAGCACTCTTACTACATaGTTATCATTATTTGTGTGTCTGGCTTCCAAACTA +
Preference number: 6 (lower is better)
Translates to: IVGIFCHSTLTT*LSLFVCLASKL
Trigger: TAGTTTGGAAGCCAGACACACAAATAATGATAACAATGTAGTAAGAGTGCTGTGACAGAAGATGCCCACTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684512.1
CDS CAA 72 bp ATGAACACATGCCTTTACCTTCCTCCTTTCTTCTCTTaGCTTCTTCCTCATTTCTTTCTTTGGCTTTCAATG +
Preference number: 6 (lower is better)
Translates to: MNTCLYLPPFFS*LLPHFFLWLSM
Trigger: CATTGAAAGCCAAAGAAAGAAATGAGGAAGAAGCAAAGAGAAGAAAGGAGGAAGGTAAAGGCATGTGTTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684683.1
CDS CAA 90 bp ACAATAAAACACAGGTACCTACTTTACCTTCCTCCTTTCTTCTCTTaGCTTCTTCCTCATTTCTTTCTTTGGCTTTCAATGCTTCATCAG +
Preference number: 6 (lower is better)
Translates to: TIKHRYLLYLPPFFS*LLPHFFLWLSMLHQ
Trigger: CTGATGAAGCATTGAAAGCCAAAGAAAGAAATGAGGAAGAAGCAAAGAGAAGAAAGGAGGAAGGTAAAGTAGGTACCTGTGTTTTATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683831.1
CDS CAA 90 bp GTTGTTACAATAAAACACAGGTACCTACTTCCTCCTTTCTTCTCTTaGCTTCTTCCTCATTTCTTTCTTTGGCTTTCAATGCTTCATCAG +
Preference number: 6 (lower is better)
Translates to: VVTIKHRYLLPPFFS*LLPHFFLWLSMLHQ
Trigger: CTGATGAAGCATTGAAAGCCAAAGAAAGAAATGAGGAAGAAGCAAAGAGAAGAAAGGAGGAAGTAGGTACCTGTGTTTTATTGTAACAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683516.1
CDS CAA 72 bp ATAAAACACAGGTACCTACTTCCTCCTTTCTTCTCTTaGCTTCTTCCTCATTTCTTTCTTTGGCTTTCAATG +
Preference number: 6 (lower is better)
Translates to: IKHRYLLPPFFS*LLPHFFLWLSM
Trigger: CATTGAAAGCCAAAGAAAGAAATGAGGAAGAAGCAAAGAGAAGAAAGGAGGAAGTAGGTACCTGTGTTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683516.1
CDS GCA 72 bp AGACAGGAATCATATATGCATCATGGGAATCATTTTTaGAGCACAGTTTCCTTTAAAGGCACTCTTTTAGTA +
Preference number: 6 (lower is better)
Translates to: RQESYMHHGNHF*STVSFKGTLLV
Trigger: TACTAAAAGAGTGCCTTTAAAGGAAACTGTGCTGCAAAAATGATTCCCATGATGCATATATGATTCCTGTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471911.5
CDS GCA 72 bp TTTCATGGAAGACAGCAAAGTATGATGTTAGTGATGTaGTCACTGATAATGAACAAAGTAGAGCTCAGAAAT +
Preference number: 6 (lower is better)
Translates to: FHGRQQSMMLVM*SLIMNKVELRN
Trigger: ATTTCTGAGCTCTACTTTGTTCATTATCAGTGAGCACATCACTAACATCATACTTTGCTGTCTTCCATGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000482822.3
ENST00000682500.1
ENST00000683137.1
CDS CAA 72 bp TTAGAGATAAACCAAGACTTGGAGAGATTAAGTGACTaGACTAGGATCACACAGCTAGTAAATGAAAGAGTT +
Preference number: 6 (lower is better)
Translates to: LEINQDLERLSD*TRITQLVNERV
Trigger: AACTCTTTCATTTACTAGCTGTGTGATCCTAGTCAAGTCACTTAATCTCTCCAAGTCTTGGTTTATCTCTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684512.1
CDS TCA 72 bp AGAAAAGCCCTTAACAAAGTTGGGTTATACTTTCAATaGGATTATTTGGAATCCCGTTGCAAGCTCAAAATA +
Preference number: 6 (lower is better)
Translates to: RKALNKVGLYFQ*DYLESRCKLKI
Trigger: TATTTTGAGCTTGCAACGGGATTCCAAATAATCTCATTGAAAGTATAACCCAACTTTGTTAAGGGCTTTTCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683831.1
CDS CCA 72 bp TACAAGTATTTCAGTAAAATATCCCAAAAGTCTTGTTaGGTACATTTCTCAGAACAGCATCCATCTACTGAA +
Preference number: 6 (lower is better)
Translates to: YKYFSKISQKSC*VHFSEQHPSTE
Trigger: TTCAGTAGATGGATGCTGTTCTGAGAAATGTACCCAACAAGACTTTTGGGATATTTTACTGAAATACTTGTA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683394.1