RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RSPO1 (Homo sapiens)

Ensembl gene IDs: ENSG00000169218

Ensembl transcript IDs: ENST00000356545.7, ENST00000401068.1, ENST00000612451.4, ENST00000615459.4

Found 552 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGTTTCTTCCCAGGTCACCAGCAGTCCTCAAGCTTGGCTCCCATCTaGCACAGTGGCTGGTCCGATCCCAGCAGCTTCTCCAGAAGGCTC +
Preference number: 1 (lower is better)
Translates to: GFFPGHQQSSSLAPI*HSGWSDPSSFSRRL
Trigger: GAGCCTTCTGGAGAAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCTGGTGACCTGGGAAGAAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR CCA 90 bp GATGGGAAGAAGGTTTCTTCCCAGGTCACCAGCAGTCCTCAAGCTTaGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTCT +
Preference number: 1 (lower is better)
Translates to: DGKKVSSQVTSSPQA*LPSATVAGPIPAAS
Trigger: AGAAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCTGGTGACCTGGGAAGAAACCTTCTTCCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR CCA 90 bp TCTTCCCCACCAACCTCTAAGCTCCACAAGAGCAAGGCCCGTGTTTaGCTCCTCCCTGGAAACCTAGCACCTAGTCCAGAGCCTGGCACA +
Preference number: 1 (lower is better)
Translates to: SSPPTSKLHKSKARV*LLPGNLAPSPEPGT
Trigger: TGTGCCAGGCTCTGGACTAGGTGCTAGGTTTCCAGGGAGGAGCCAAACACGGGCCTTGCTCTTGTGGAGCTTAGAGGTTGGTGGGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
3UTR CCA 90 bp ACTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATaGAAGTGTCTTCTGGTGGCCTCAGGTGTGTGTGTGTGTGTGTGT +
Preference number: 1 (lower is better)
Translates to: TGSSGNQVCTAGPEG*KCLLVASGVCVCVC
Trigger: ACACACACACACACACACACCTGAGGCCACCAGAAGACACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR CCA 90 bp ACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTCTTCTGGTaGCCTCAGGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGG +
Preference number: 1 (lower is better)
Translates to: TKCVLLGPRDGSVFW*PQVCVCVCVYVCVW
Trigger: CCACACACACACATACACACACACACACACACACACCTGAGGCCACCAGAAGACACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR TCA 90 bp GTGTGTGTGTATGCTTTGCCCCCGACGTTCCAGTTCAGGAAAGCTTaGATCACGCAGAGTAGCACTGAACTCTTTCTGCATGGGCCTGGA +
Preference number: 1 (lower is better)
Translates to: VCVYALPPTFQFRKA*ITQSSTELFLHGPG
Trigger: TCCAGGCCCATGCAGAAAGAGTTCAGTGCTACTCTGCGTGATTCAAGCTTTCCTGAACTGGAACGTCGGGGGCAAAGCATACACACACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR TCA 90 bp TATATAGATTCTGCCTCTCCCAGATGGAAAGTCCTCCTTTATAGCTaGCCAGAATCCCTCCTGCTGCAAGATGGCCGGGGCCCTTTCTCC +
Preference number: 1 (lower is better)
Translates to: YIDSASPRWKVLLYS*PESLLLQDGRGPFS
Trigger: GGAGAAAGGGCCCCGGCCATCTTGCAGCAGGAGGGATTCTGGTCAGCTATAAAGGAGGACTTTCCATCTGGGAGAGGCAGAATCTATATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
3UTR GCA 90 bp ACTGAGCAGGCTATTTGGGGTCTCTTGAAATTCCCTGTCCCTTCTTaGTCCTACGCATACCTCGCCAAACCCTCACACCCTGCAAAGGAA +
Preference number: 1 (lower is better)
Translates to: TEQAIWGLLKFPVPS*SYAYLAKPSHPAKE
Trigger: TTCCTTTGCAGGGTGTGAGGGTTTGGCGAGGTATGCGTAGGAGCAAGAAGGGACAGGGAATTTCAAGAGACCCCAAATAGCCTGCTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR GCA 90 bp TGTCCCTTCTTGCTCCTACGCATACCTCGCCAAACCCTCACACCCTaGAAAGGAATGTGGTGCCTGTGTCTACTGCTGTCGTTGATTTTT +
Preference number: 1 (lower is better)
Translates to: CPFLLLRIPRQTLTP*KGMWCLCLLLSLIF
Trigger: AAAAATCAACGACAGCAGTAGACACAGGCACCACATTCCTTTGCAGGGTGTGAGGGTTTGGCGAGGTATGCGTAGGAGCAAGAAGGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR CCA 90 bp CCTCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTCTGCTGGGCCCGAGGGATaGAAGTGTCTTCTGGTGGCC +
Preference number: 2 (lower is better)
Translates to: PQAWLPSATVAGPIPAASAGPEG*KCLLVA
Trigger: GGCCACCAGAAGACACTTCCATCCCTCGGGCCCAGC...AGAAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR CCA 90 bp TGCCTTTGGGCAGGATTGTCCCCAACCATCACTGGAAGCCTACGCACTCCCTTCCCTCCTGCTGCAAGATaGCCGGGGCCCTTTCTCCCG +
Preference number: 2 (lower is better)
Translates to: CLWAGLSPTITGSLRTPFPPAAR*PGPFLP
Trigger: CGGGAGAAAGGGCCCCGGCCATCTTGCAGCAGGAGG...GAAGGGAGTGCGTAGGCTTCCAGTGATGGTTGGGGACAATCCTGCCCAAAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
3UTR CAA 90 bp GGATGGGAAGAAGGTTTCTTCCCAGGTCACCAGCAGTCCTCAAGCTaGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTC +
Preference number: 2 (lower is better)
Translates to: GWEEGFFPGHQQSSS*APICHSGWSDPSSF
Trigger: GAAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCTGGTGACCTGGGAAGAAACCTTCTTCCCATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR TCA 90 bp GTCCTCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTGGGAAGTGTTGTCTCTaGCATGTCCACTGGGAGCTC +
Preference number: 2 (lower is better)
Translates to: VLKLGSHLPQWLVRSQQLGKCCL*HVHWEL
Trigger: GAGCTCCCAGTGGACATGTCAGAGACAACACTTCCC...AAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR GCA 90 bp TTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTCTCCAGAAGGGCACTGAACTCTTTCTaGATGGGCCTGGAGGCTGGA +
Preference number: 2 (lower is better)
Translates to: LAPICHSGWSDPSSFSRRALNSF*MGLEAG
Trigger: TCCAGCCTCCAGGCCCATGCAGAAAGAGTTCAGTGC...CCTTCTGGAGAAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR GCA 90 bp GTCCTCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTGCACTGAACTCTTTCTaGATGGGCCTGGAGGCTGGA +
Preference number: 2 (lower is better)
Translates to: VLKLGSHLPQWLVRSQQLALNSF*MGLEAG
Trigger: TCCAGCCTCCAGGCCCATGCAGAAAGAGTTCAGTGC...AAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR GCA 90 bp TGTCCACTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAGCACTGAACTCTTTCTaGATGGGCCTGGAGGCTGGA +
Preference number: 2 (lower is better)
Translates to: CPLGALETKCVLLGPRDGALNSF*MGLEAG
Trigger: TCCAGCCTCCAGGCCCATGCAGAAAGAGTTCAGTGC...TCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAGTGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR GCA 90 bp CCTCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTCTCAGAAGGCTCCCCTCTaGAGTTTGGTCTCAGATGCT +
Preference number: 2 (lower is better)
Translates to: PQAWLPSATVAGPIPAASQKAPL*SLVSDA
Trigger: AGCATCTGAGACCAAACTGCAGAGGGGAGCCTTCTG...AGAAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR GCA 90 bp AGGTCACCAGCAGTCCTCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGACAGAAGGCTCCCCTCTaGAGTTTGGTCTCAGATGCT +
Preference number: 2 (lower is better)
Translates to: RSPAVLKLGSHLPQWLVRQKAPL*SLVSDA
Trigger: AGCATCTGAGACCAAACTGCAGAGGGGAGCCTTCTG...TCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCTGGTGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR CCA 90 bp GTCCTCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTGGAAGTGTCTTCTGGTaGCCTCAGGTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: VLKLGSHLPQWLVRSQQLGSVFW*PQVCVC
Trigger: ACACACACACACCTGAGGCCACCAGAAGACACTTCC...AAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR CCA 90 bp TTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTCTCCAGAAGGGATGGAAGTGTCTTCTaGTGGCCTCAGGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: LAPICHSGWSDPSSFSRRDGSVF*WPQVCV
Trigger: CACACACACCTGAGGCCACCAGAAGACACTTCCATC...CCTTCTGGAGAAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR CCA 90 bp GTCCTCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTCTCCCCTCTGCAGTTTaGTCTCAGATGCTGGGAAGT +
Preference number: 2 (lower is better)
Translates to: VLKLGSHLPQWLVRSQQLLPSAV*SQMLGS
Trigger: ACTTCCCAGCATCTGAGACCAAACTGCAGAGGGGAG...AAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR CCA 90 bp GAGATTCTCATTCCTAACAAGCTGCCCTGTGACAACACTGCTGCCGGGCCATGCTCCCATCTGCCACAGTaGCTGGTCCGATCCCAGCAG +
Preference number: 2 (lower is better)
Translates to: EILIPNKLPCDNTAAGPCSHLPQ*LVRSQQ
Trigger: CTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGA...GCATGGCCCGGCAGCAGTGTTGTCACAGGGCAGCTTGTTAGGAATGAGAATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR CCA 90 bp ACCAGAATCCCTCCTGCTGCAAGATGGCCGGGGCCCTTTCTCCCGTCCTTTAAGCCCTGCAAAGGAATGTaGTGCCTGTGTCTACTGCTG +
Preference number: 2 (lower is better)
Translates to: TRIPPAARWPGPFLPSFKPCKGM*CLCLLL
Trigger: CAGCAGTAGACACAGGCACCACATTCCTTTGCAGGG...CTTAAAGGACGGGAGAAAGGGCCCCGGCCATCTTGCAGCAGGAGGGATTCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR TCA 90 bp CCTCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTCTCAGTTCAGGAAAGCTTaGATCACGCAGAGTAGCACT +
Preference number: 2 (lower is better)
Translates to: PQAWLPSATVAGPIPAASQFRKA*ITQSST
Trigger: AGTGCTACTCTGCGTGATTCAAGCTTTCCTGAACTG...AGAAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR TCA 90 bp TGCCTTTGGGCAGGATTGTCCCCAACCATCACTGGAAGCCTACGCACTCCCTTCGTCCTCCTTTATAGCTaGCCAGAATCCCTCCTGCTG +
Preference number: 2 (lower is better)
Translates to: CLWAGLSPTITGSLRTPFVLLYS*PESLLL
Trigger: CAGCAGGAGGGATTCTGGTCAGCTATAAAGGAGGAC...GAAGGGAGTGCGTAGGCTTCCAGTGATGGTTGGGGACAATCCTGCCCAAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR CCA 90 bp TGCCTTTGGGCAGGATTGTCCCCAACCATCACTGGAAGCCTACGCACTCCCTTCGATGGAAGTGTCTTCTaGTGGCCTCAGGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: CLWAGLSPTITGSLRTPFDGSVF*WPQVCV
Trigger: CACACACACCTGAGGCCACCAGAAGACACTTCCATC...GAAGGGAGTGCGTAGGCTTCCAGTGATGGTTGGGGACAATCCTGCCCAAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR CCA 90 bp AGGTTTCTTCCCAGGTCACCAGCAGTCCTCAAGCTTGGCTCCCATCTGCCACAGGTCCACTGGGAGCTCTaGAAACCAAGTGTGTACTGC +
Preference number: 2 (lower is better)
Translates to: RFLPRSPAVLKLGSHLPQVHWEL*KPSVYC
Trigger: GCAGTACACACTTGGTTTCCAGAGCTCCCAGTGGAC...CTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCTGGTGACCTGGGAAGAAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR CCA 90 bp AGGTTTCTTCCCAGGTCACCAGCAGTCCTCAAGCTTGGCTCCCATCTGCCACAGCTCCCCTCTGCAGTTTaGTCTCAGATGCTGGGAAGT +
Preference number: 2 (lower is better)
Translates to: RFLPRSPAVLKLGSHLPQLPSAV*SQMLGS
Trigger: ACTTCCCAGCATCTGAGACCAAACTGCAGAGGGGAG...CTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCTGGTGACCTGGGAAGAAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR CCA 90 bp CCTACGCACTCCCTTCCCCTGGCAGTGCCACTAGCCCTTCAGTATATAGATTCTATCTGCCACAGTGGCTaGTCCGATCCCAGCAGCTTC +
Preference number: 2 (lower is better)
Translates to: PTHSLPLAVPLALQYIDSICHSG*SDPSSF
Trigger: GAAGCTGCTGGGATCGGACCAGCCACTGTGGCAGAT...AGAATCTATATACTGAAGGGCTAGTGGCACTGCCAGGGGAAGGGAGTGCGTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR CCA 90 bp TGCCTTTGGGCAGGATTGTCCCCAACCATCACTGGAAGCCTACGCACTCCCTTCCCCTGCAAAGGAATGTaGTGCCTGTGTCTACTGCTG +
Preference number: 2 (lower is better)
Translates to: CLWAGLSPTITGSLRTPFPCKGM*CLCLLL
Trigger: CAGCAGTAGACACAGGCACCACATTCCTTTGCAGGG...GAAGGGAGTGCGTAGGCTTCCAGTGATGGTTGGGGACAATCCTGCCCAAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
3UTR CAA 90 bp CCAGAAGGCTCCCCTCTGCAGTTTGGTCTCAGATGCTGGGAAGTGTaGTCTCTGACATGTCCACTGGGAGCTCTGGAAACCAAGTGTGTA +
Preference number: 2 (lower is better)
Translates to: PEGSPLQFGLRCWEV*SLTCPLGALETKCV
Trigger: TACACACTTGGTTTCCAGAGCTCCCAGTGGACATGTCAGAGACAACACTTCCCAGCATCTGAGACCAAACTGCAGAGGGGAGCCTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR TCA 90 bp CCTACGCACTCCCTTCCCCTGGCAGTGCCACTAGCCCTTCAGTATATAGATTCTGTCCTCCTTTATAGCTaGCCAGAATCCCTCCTGCTG +
Preference number: 2 (lower is better)
Translates to: PTHSLPLAVPLALQYIDSVLLYS*PESLLL
Trigger: CAGCAGGAGGGATTCTGGTCAGCTATAAAGGAGGAC...AGAATCTATATACTGAAGGGCTAGTGGCACTGCCAGGGGAAGGGAGTGCGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR GCA 90 bp TGCCTTTGGGCAGGATTGTCCCCAACCATCACTGGAAGCCTACGCACTCCCTTCCAGTTTGGTCTCAGATaGTGGGAAGTGTTGTCTCTG +
Preference number: 2 (lower is better)
Translates to: CLWAGLSPTITGSLRTPFQFGLR*WEVLSL
Trigger: CAGAGACAACACTTCCCAGCATCTGAGACCAAACTG...GAAGGGAGTGCGTAGGCTTCCAGTGATGGTTGGGGACAATCCTGCCCAAAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR GCA 90 bp TTTTCTTCCCCACCAACCTCTAAGCTCCACAAGAGCAAGGCCCGTGTTTGGCTCCAAACCCTCACACCCTaGAAAGGAATGTGGTGCCTG +
Preference number: 2 (lower is better)
Translates to: FSSPPTSKLHKSKARVWLQTLTP*KGMWCL
Trigger: CAGGCACCACATTCCTTTGCAGGGTGTGAGGGTTTG...GAGCCAAACACGGGCCTTGCTCTTGTGGAGCTTAGAGGTTGGTGGGGAAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR CCA 90 bp GAAGGCTCCCCTCTGCAGTTTGGTCTCAGATGCTGGGAAGTGTTGTCTCTGACAGGAAGTGTCTTCTGGTaGCCTCAGGTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: EGSPLQFGLRCWEVLSLTGSVFW*PQVCVC
Trigger: ACACACACACACCTGAGGCCACCAGAAGACACTTCC...TGTCAGAGACAACACTTCCCAGCATCTGAGACCAAACTGCAGAGGGGAGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR CCA 90 bp CCACCGTCAGAGCAGCCCCTAAGTTTTCTTCCTTGTCTGCATGACCCTCTACTGGATGGAAGTGTCTTCTaGTGGCCTCAGGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: PPSEQPLSFLPCLHDPLLDGSVF*WPQVCV
Trigger: CACACACACCTGAGGCCACCAGAAGACACTTCCATC...CAGTAGAGGGTCATGCAGACAAGGAAGAAAACTTAGGGGCTGCTCTGACGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR CCA 90 bp GAAGGCTCCCCTCTGCAGTTTGGTCTCAGATGCTGGGAAGTGTTGTCTCTGACAGTCCACTGGGAGCTCTaGAAACCAAGTGTGTACTGC +
Preference number: 2 (lower is better)
Translates to: EGSPLQFGLRCWEVLSLTVHWEL*KPSVYC
Trigger: GCAGTACACACTTGGTTTCCAGAGCTCCCAGTGGAC...TGTCAGAGACAACACTTCCCAGCATCTGAGACCAAACTGCAGAGGGGAGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR CCA 90 bp CCTACGCACTCCCTTCCCCTGGCAGTGCCACTAGCCCTTCAGTATATAGATTCTGTCCACTGGGAGCTCTaGAAACCAAGTGTGTACTGC +
Preference number: 2 (lower is better)
Translates to: PTHSLPLAVPLALQYIDSVHWEL*KPSVYC
Trigger: GCAGTACACACTTGGTTTCCAGAGCTCCCAGTGGAC...AGAATCTATATACTGAAGGGCTAGTGGCACTGCCAGGGGAAGGGAGTGCGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR GCA 90 bp ACACTGCTGCCGGGCCATGCTCTGAGTAACAAGGATATAGACAGCCTGTTTACCAAACCAAGTGTGTACTaGTGGGCCCGAGGGATGGAA +
Preference number: 2 (lower is better)
Translates to: TLLPGHALSNKDIDSLFTKPSVY*WARGME
Trigger: TTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTT...GGTAAACAGGCTGTCTATATCCTTGTTACTCAGAGCATGGCCCGGCAGCAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR CCA 90 bp CAGTTTGGTCTCAGATGCTGGGAAGTGTTGTCTCTGACATGTCCACTGGGAGCTGGAAGTGTCTTCTGGTaGCCTCAGGTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: QFGLRCWEVLSLTCPLGAGSVFW*PQVCVC
Trigger: ACACACACACACCTGAGGCCACCAGAAGACACTTCC...AGCTCCCAGTGGACATGTCAGAGACAACACTTCCCAGCATCTGAGACCAAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR CCA 90 bp TGCCTTTGGGCAGGATTGTCCCCAACCATCACTGGAAGCCTACGCACTCCCTTCTTTGGTCTCAGATGCTaGGAAGTGTTGTCTCTGACA +
Preference number: 2 (lower is better)
Translates to: CLWAGLSPTITGSLRTPFFGLRC*EVLSLT
Trigger: TGTCAGAGACAACACTTCCCAGCATCTGAGACCAAA...GAAGGGAGTGCGTAGGCTTCCAGTGATGGTTGGGGACAATCCTGCCCAAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR CCA 90 bp AGGTTTCTTCCCAGGTCACCAGCAGTCCTCAAGCTTGGCTCCCATCTGCCACAGTTTGGTCTCAGATGCTaGGAAGTGTTGTCTCTGACA +
Preference number: 2 (lower is better)
Translates to: RFLPRSPAVLKLGSHLPQFGLRC*EVLSLT
Trigger: TGTCAGAGACAACACTTCCCAGCATCTGAGACCAAA...CTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCTGGTGACCTGGGAAGAAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR TCA 90 bp CATACCTCGCCAAACCCTCACACCCTGCAAAGGAATGTGGTGCCTGTGTCTACTCAGTTCAGGAAAGCTTaGATCACGCAGAGTAGCACT +
Preference number: 2 (lower is better)
Translates to: HTSPNPHTLQRNVVPVSTQFRKA*ITQSST
Trigger: AGTGCTACTCTGCGTGATTCAAGCTTTCCTGAACTG...AGTAGACACAGGCACCACATTCCTTTGCAGGGTGTGAGGGTTTGGCGAGGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR GCA 90 bp ACACTGCTGCCGGGCCATGCTCTGAGTAACAAGGATATAGACAGCCTGTTTACCTGTGTGTGTATGCTTTaGCCCCGACGTTCCAGTTCA +
Preference number: 2 (lower is better)
Translates to: TLLPGHALSNKDIDSLFTCVCML*PRRSSS
Trigger: TGAACTGGAACGTCGGGGGCAAAGCATACACACACA...GGTAAACAGGCTGTCTATATCCTTGTTACTCAGAGCATGGCCCGGCAGCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR GCA 90 bp TGTCCACTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGATCTTGTGTCTATGTATaGATGGATGGATTGGAGTGT +
Preference number: 2 (lower is better)
Translates to: CPLGALETKCVLLGPRDGSCVYV*MDGLEC
Trigger: ACACTCCAATCCATCCATGCATACATAGACACAAGA...TCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAGTGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR GCA 90 bp ACACTGCTGCCGGGCCATGCTCTGAGTAACAAGGATATAGACAGCCTGTTTACCTGCAAAGGAATGTGGTaGCTGTGTCTACTGCTGTCG +
Preference number: 2 (lower is better)
Translates to: TLLPGHALSNKDIDSLFTCKGMW*LCLLLS
Trigger: CGACAGCAGTAGACACAGGCACCACATTCCTTTGCA...GGTAAACAGGCTGTCTATATCCTTGTTACTCAGAGCATGGCCCGGCAGCAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR TCA 90 bp CAGTTTGGTCTCAGATGCTGGGAAGTGTTGTCTCTGACATGTCCACTGGGAGCTCAGTTCAGGAAAGCTTaGATCACGCAGAGTAGCACT +
Preference number: 2 (lower is better)
Translates to: QFGLRCWEVLSLTCPLGAQFRKA*ITQSST
Trigger: AGTGCTACTCTGCGTGATTCAAGCTTTCCTGAACTG...AGCTCCCAGTGGACATGTCAGAGACAACACTTCCCAGCATCTGAGACCAAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR GCA 90 bp AGTAACAAGGATATAGACAGCCTGTTTACCACCGTCAGAGCAGCCCCTAAGTTTGCACTGAACTCTTTCTaGATGGGCCTGGAGGCTGGA +
Preference number: 2 (lower is better)
Translates to: SNKDIDSLFTTVRAAPKFALNSF*MGLEAG
Trigger: TCCAGCCTCCAGGCCCATGCAGAAAGAGTTCAGTGC...AAACTTAGGGGCTGCTCTGACGGTGGTAAACAGGCTGTCTATATCCTTGTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR GCA 90 bp ACACTGCTGCCGGGCCATGCTCTGAGTAACAAGGATATAGACAGCCTGTTTACCCAGTTTGGTCTCAGATaGTGGGAAGTGTTGTCTCTG +
Preference number: 2 (lower is better)
Translates to: TLLPGHALSNKDIDSLFTQFGLR*WEVLSL
Trigger: CAGAGACAACACTTCCCAGCATCTGAGACCAAACTG...GGTAAACAGGCTGTCTATATCCTTGTTACTCAGAGCATGGCCCGGCAGCAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR GCA 90 bp AGGGTAACAATACTCTCCAACGATAAAGTCACACAGCTGGGAGTGCTGAACAGGCAGAAGGCTCCCCTCTaGAGTTTGGTCTCAGATGCT +
Preference number: 2 (lower is better)
Translates to: RVTILSNDKVTQLGVLNRQKAPL*SLVSDA
Trigger: AGCATCTGAGACCAAACTGCAGAGGGGAGCCTTCTG...CCTGTTCAGCACTCCCAGCTGTGTGACTTTATCGTTGGAGAGTATTGTTACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR CCA 90 bp AGGGTAACAATACTCTCCAACGATAAAGTCACACAGCTGGGAGTGCTGAACAGGGGAAGTGTCTTCTGGTaGCCTCAGGTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: RVTILSNDKVTQLGVLNRGSVFW*PQVCVC
Trigger: ACACACACACACCTGAGGCCACCAGAAGACACTTCC...CCTGTTCAGCACTCCCAGCTGTGTGACTTTATCGTTGGAGAGTATTGTTACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR CCA 90 bp ACCAGAATCCCTCCTGCTGCAAGATGGCCGGGGCCCTTTCTCCCGTCCTTTAAGAGCACTTCTCAAATTTaGGTAACATGCCAATCATCA +
Preference number: 2 (lower is better)
Translates to: TRIPPAARWPGPFLPSFKSTSQI*VTCQSS
Trigger: TGATGATTGGCATGTTACCCAAATTTGAGAAGTGCT...CTTAAAGGACGGGAGAAAGGGCCCCGGCCATCTTGCAGCAGGAGGGATTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR TCA 90 bp TACAATTCCTTGGTGCATGCCTATTTTCTTCCCCACCAACCTCTAAGCTCCACATGCATGACCCTCTACTaGGCAGGCTATTTGGGGTCT +
Preference number: 2 (lower is better)
Translates to: YNSLVHAYFLPHQPLSSTCMTLY*AGYLGS
Trigger: AGACCCCAAATAGCCTGCTCAGTAGAGGGTCATGCA...TGTGGAGCTTAGAGGTTGGTGGGGAAGAAAATAGGCATGCACCAAGGAATTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR GCA 90 bp TACAATTCCTTGGTGCATGCCTATTTTCTTCCCCACCAACCTCTAAGCTCCACAAAACCAAGTGTGTACTaGTGGGCCCGAGGGATGGAA +
Preference number: 2 (lower is better)
Translates to: YNSLVHAYFLPHQPLSSTKPSVY*WARGME
Trigger: TTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTT...TGTGGAGCTTAGAGGTTGGTGGGGAAGAAAATAGGCATGCACCAAGGAATTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR GCA 90 bp GATATGTATCCTGGAAGGGTAACAATACTCTCCAACGATAAAGTCACACAGCTGAGCTTGGCTCCCATCTaGCACAGTGGCTGGTCCGAT +
Preference number: 2 (lower is better)
Translates to: DMYPGRVTILSNDKVTQLSLAPI*HSGWSD
Trigger: ATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCT...CAGCTGTGTGACTTTATCGTTGGAGAGTATTGTTACCCTTCCAGGATACATATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR GCA 90 bp TCAGGAATCTTAAAATTTAGACTCTGGCTCACCAGGTCTGGAATGAGACCTGAGTTCCCTGTCCCTTCTTaGTCCTACGCATACCTCGCC +
Preference number: 2 (lower is better)
Translates to: SGILKFRLWLTRSGMRPEFPVPS*SYAYLA
Trigger: GGCGAGGTATGCGTAGGAGCAAGAAGGGACAGGGAA...CTCAGGTCTCATTCCAGACCTGGTGAGCCAGAGTCTAAATTTTAAGATTCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR CCA 90 bp GAAGGCTCCCCTCTGCAGTTTGGTCTCAGATGCTGGGAAGTGTTGTCTCTGACAGTGTCTATGTATGCATaGATGGATTGGAGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: EGSPLQFGLRCWEVLSLTVSMYA*MDWSVC
Trigger: ACACACACTCCAATCCATCCATGCATACATAGACAC...TGTCAGAGACAACACTTCCCAGCATCTGAGACCAAACTGCAGAGGGGAGCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR CCA 90 bp TTCTCCAGAAGGCTCCCCTCTGCAGTTTGGTCTCAGATGCTGGGAAGTGTTGTCGTGTCTATGTATGCATaGATGGATTGGAGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: FSRRLPSAVWSQMLGSVVVSMYA*MDWSVC
Trigger: ACACACACTCCAATCCATCCATGCATACATAGACAC...GACAACACTTCCCAGCATCTGAGACCAAACTGCAGAGGGGAGCCTTCTGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR TCA 90 bp TCAGGAATCTTAAAATTTAGACTCTGGCTCACCAGGTCTGGAATGAGACCTGAGTGCATGACCCTCTACTaGGCAGGCTATTTGGGGTCT +
Preference number: 2 (lower is better)
Translates to: SGILKFRLWLTRSGMRPECMTLY*AGYLGS
Trigger: AGACCCCAAATAGCCTGCTCAGTAGAGGGTCATGCA...CTCAGGTCTCATTCCAGACCTGGTGAGCCAGAGTCTAAATTTTAAGATTCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR GCA 90 bp CCTACGCACTCCCTTCCCCTGGCAGTGCCACTAGCCCTTCAGTATATAGATTCTTCTTGTGTCTATGTATaGATGGATGGATTGGAGTGT +
Preference number: 2 (lower is better)
Translates to: PTHSLPLAVPLALQYIDSSCVYV*MDGLEC
Trigger: ACACTCCAATCCATCCATGCATACATAGACACAAGA...AGAATCTATATACTGAAGGGCTAGTGGCACTGCCAGGGGAAGGGAGTGCGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR GCA 90 bp TCAGGAATCTTAAAATTTAGACTCTGGCTCACCAGGTCTGGAATGAGACCTGAGAAACCAAGTGTGTACTaGTGGGCCCGAGGGATGGAA +
Preference number: 2 (lower is better)
Translates to: SGILKFRLWLTRSGMRPEKPSVY*WARGME
Trigger: TTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTT...CTCAGGTCTCATTCCAGACCTGGTGAGCCAGAGTCTAAATTTTAAGATTCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR GCA 90 bp CAATCATCAGGAATCTTAAAATTTAGACTCTGGCTCACCAGGTCTGGAATGAGAAGCTTGGCTCCCATCTaGCACAGTGGCTGGTCCGAT +
Preference number: 2 (lower is better)
Translates to: QSSGILKFRLWLTRSGMRSLAPI*HSGWSD
Trigger: ATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCT...TCTCATTCCAGACCTGGTGAGCCAGAGTCTAAATTTTAAGATTCCTGATGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR GCA 90 bp TGCCTTTGGGCAGGATTGTCCCCAACCATCACTGGAAGCCTACGCACTCCCTTCCAAATTTGGGTAACATaGCAATCATCAGGAATCTTA +
Preference number: 2 (lower is better)
Translates to: CLWAGLSPTITGSLRTPFQIWVT*QSSGIL
Trigger: TAAGATTCCTGATGATTGGCATGTTACCCAAATTTG...GAAGGGAGTGCGTAGGCTTCCAGTGATGGTTGGGGACAATCCTGCCCAAAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR CCA 90 bp CAGTTTGGTCTCAGATGCTGGGAAGTGTTGTCTCTGACATGTCCACTGGGAGCTGTGTCTATGTATGCATaGATGGATTGGAGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: QFGLRCWEVLSLTCPLGAVSMYA*MDWSVC
Trigger: ACACACACTCCAATCCATCCATGCATACATAGACAC...AGCTCCCAGTGGACATGTCAGAGACAACACTTCCCAGCATCTGAGACCAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR CCA 90 bp GAAGGCTCCCCTCTGCAGTTTGGTCTCAGATGCTGGGAAGTGTTGTCTCTGACAATGTGCAAGTATGTATaGTTGTATATGTGGACAGGG +
Preference number: 2 (lower is better)
Translates to: EGSPLQFGLRCWEVLSLTMCKYV*LYMWTG
Trigger: CCCTGTCCACATATACAACCATACATACTTGCACAT...TGTCAGAGACAACACTTCCCAGCATCTGAGACCAAACTGCAGAGGGGAGCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR CCA 90 bp TCAGGAATCTTAAAATTTAGACTCTGGCTCACCAGGTCTGGAATGAGACCTGAGCCCTGCAAAGGAATGTaGTGCCTGTGTCTACTGCTG +
Preference number: 2 (lower is better)
Translates to: SGILKFRLWLTRSGMRPEPCKGM*CLCLLL
Trigger: CAGCAGTAGACACAGGCACCACATTCCTTTGCAGGG...CTCAGGTCTCATTCCAGACCTGGTGAGCCAGAGTCTAAATTTTAAGATTCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR TCA 90 bp GCAAGTATGTATGGTTGTATATGTGGACAGGGGTTTGAGCGTGTGTGTCTTGTGCAGTTCAGGAAAGCTTaGATCACGCAGAGTAGCACT +
Preference number: 2 (lower is better)
Translates to: ASMYGCICGQGFERVCLVQFRKA*ITQSST
Trigger: AGTGCTACTCTGCGTGATTCAAGCTTTCCTGAACTG...CACAAGACACACACGCTCAAACCCCTGTCCACATATACAACCATACATACTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR TCA 90 bp CAATCATCAGGAATCTTAAAATTTAGACTCTGGCTCACCAGGTCTGGAATGAGACACAGCTGGGAGTGCTaGACAGGATGGGAAGAAGGT +
Preference number: 2 (lower is better)
Translates to: QSSGILKFRLWLTRSGMRHSWEC*TGWEEG
Trigger: ACCTTCTTCCCATCCTGTTCAGCACTCCCAGCTGTG...TCTCATTCCAGACCTGGTGAGCCAGAGTCTAAATTTTAAGATTCCTGATGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR GCA 90 bp CAGTTTGGTCTCAGATGCTGGGAAGTGTTGTCTCTGACATGTCCACTGGGAGCTTCTTGTGTCTATGTATaGATGGATGGATTGGAGTGT +
Preference number: 2 (lower is better)
Translates to: QFGLRCWEVLSLTCPLGASCVYV*MDGLEC
Trigger: ACACTCCAATCCATCCATGCATACATAGACACAAGA...AGCTCCCAGTGGACATGTCAGAGACAACACTTCCCAGCATCTGAGACCAAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR CCA 90 bp CCTTGGCACCATCCTTTTGTAGTTATATATGTGTTTGTACAATTCCTTGGTGCAATCTGCCACAGTGGCTaGTCCGATCCCAGCAGCTTC +
Preference number: 2 (lower is better)
Translates to: PWHHPFVVIYVFVQFLGAICHSG*SDPSSF
Trigger: GAAGCTGCTGGGATCGGACCAGCCACTGTGGCAGAT...TGCACCAAGGAATTGTACAAACACATATATAACTACAAAAGGATGGTGCCAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR CCA 90 bp GGAAGTGTTGTCTCTGACATGTCCACTGGGAGCTCTGGAAACCAAGTGTGTACTATGTGCAAGTATGTATaGTTGTATATGTGGACAGGG +
Preference number: 2 (lower is better)
Translates to: GSVVSDMSTGSSGNQVCTMCKYV*LYMWTG
Trigger: CCCTGTCCACATATACAACCATACATACTTGCACAT...AGTACACACTTGGTTTCCAGAGCTCCCAGTGGACATGTCAGAGACAACACTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR GCA 90 bp CAATCATCAGGAATCTTAAAATTTAGACTCTGGCTCACCAGGTCTGGAATGAGATCATTCCTAACAAGCTaGCCTGTGACAACACTGCTG +
Preference number: 2 (lower is better)
Translates to: QSSGILKFRLWLTRSGMRSFLTS*PVTTLL
Trigger: CAGCAGTGTTGTCACAGGGCAGCTTGTTAGGAATGA...TCTCATTCCAGACCTGGTGAGCCAGAGTCTAAATTTTAAGATTCCTGATGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR CCA 90 bp CAATCATCAGGAATCTTAAAATTTAGACTCTGGCTCACCAGGTCTGGAATGAGATTTGGTCTCAGATGCTaGGAAGTGTTGTCTCTGACA +
Preference number: 2 (lower is better)
Translates to: QSSGILKFRLWLTRSGMRFGLRC*EVLSLT
Trigger: TGTCAGAGACAACACTTCCCAGCATCTGAGACCAAA...TCTCATTCCAGACCTGGTGAGCCAGAGTCTAAATTTTAAGATTCCTGATGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR CCA 90 bp CAATCATCAGGAATCTTAAAATTTAGACTCTGGCTCACCAGGTCTGGAATGAGAACTGAGCAGGCTATTTaGGGTCTCTTGAAATTCCCT +
Preference number: 2 (lower is better)
Translates to: QSSGILKFRLWLTRSGMRTEQAI*GLLKFP
Trigger: AGGGAATTTCAAGAGACCCCAAATAGCCTGCTCAGT...TCTCATTCCAGACCTGGTGAGCCAGAGTCTAAATTTTAAGATTCCTGATGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR GCA 90 bp GATATGTATCCTGGAAGGGTAACAATACTCTCCAACGATAAAGTCACACAGCTGTCTTGTGTCTATGTATaGATGGATGGATTGGAGTGT +
Preference number: 2 (lower is better)
Translates to: DMYPGRVTILSNDKVTQLSCVYV*MDGLEC
Trigger: ACACTCCAATCCATCCATGCATACATAGACACAAGA...CAGCTGTGTGACTTTATCGTTGGAGAGTATTGTTACCCTTCCAGGATACATATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR GCA 90 bp CCTTGGCACCATCCTTTTGTAGTTATATATGTGTTTGTACAATTCCTTGGTGCACAAATTTGGGTAACATaGCAATCATCAGGAATCTTA +
Preference number: 2 (lower is better)
Translates to: PWHHPFVVIYVFVQFLGAQIWVT*QSSGIL
Trigger: TAAGATTCCTGATGATTGGCATGTTACCCAAATTTG...TGCACCAAGGAATTGTACAAACACATATATAACTACAAAAGGATGGTGCCAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
3UTR GCA 72 bp CCAGGTCACCAGCAGTCCTCAAGCTTGGCTCCCATCTaGCACAGTGGCTGGTCCGATCCCAGCAGCTTCTCC +
Preference number: 3 (lower is better)
Translates to: PGHQQSSSLAPI*HSGWSDPSSFS
Trigger: GGAGAAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCTGGTGACCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR CCA 72 bp AAGGTTTCTTCCCAGGTCACCAGCAGTCCTCAAGCTTaGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCA +
Preference number: 3 (lower is better)
Translates to: KVSSQVTSSPQA*LPSATVAGPIP
Trigger: TGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCTGGTGACCTGGGAAGAAACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR CAA 90 bp AGGTTTCTTCCCAGGTCACCAGCAGTCCTCAAGCTTGGCTCCCATCTGCCACAGGTGTGTGTGTATGCTTaGCCCCCGACGTTCCAGTTC +
Preference number: 3 (lower is better)
Translates to: RFLPRSPAVLKLGSHLPQVCVYA*PPTFQF
Trigger: GAACTGGAACGTCGGGGGCAAAGCATACACACACAC...CTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCTGGTGACCTGGGAAGAAACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR CCA 72 bp GTACTGCTGGGCCCGAGGGATGGAAGTGTCTTCTGGTaGCCTCAGGTGTGTGTGTGTGTGTGTGTGTATGTG +
Preference number: 3 (lower is better)
Translates to: VLLGPRDGSVFW*PQVCVCVCVYV
Trigger: CACATACACACACACACACACACACACCTGAGGCCACCAGAAGACACTTCCATCCCTCGGGCCCAGCAGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR CCA 72 bp TCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATaGAAGTGTCTTCTGGTGGCCTCAGGTGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: SGNQVCTAGPEG*KCLLVASGVCV
Trigger: CACACACACACCTGAGGCCACCAGAAGACACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR GCA 72 bp TTGCTCCTACGCATACCTCGCCAAACCCTCACACCCTaGAAAGGAATGTGGTGCCTGTGTCTACTGCTGTCG +
Preference number: 3 (lower is better)
Translates to: LLLRIPRQTLTP*KGMWCLCLLLS
Trigger: CGACAGCAGTAGACACAGGCACCACATTCCTTTGCAGGGTGTGAGGGTTTGGCGAGGTATGCGTAGGAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR CCA 72 bp CCAGAAGGCTCCCCTCTGCAGTTTGGTCTCAGATGCTaGGAAGTGTTGTCTCTGACATGTCCACTGGGAGCT +
Preference number: 3 (lower is better)
Translates to: PEGSPLQFGLRC*EVLSLTCPLGA
Trigger: AGCTCCCAGTGGACATGTCAGAGACAACACTTCCCAGCATCTGAGACCAAACTGCAGAGGGGAGCCTTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR CAA 90 bp TTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTCTCCAGAAGGTTGAGCGTGTGTGTCTaGTGTCTATGTATGCATGGA +
Preference number: 3 (lower is better)
Translates to: LAPICHSGWSDPSSFSRRLSVCV*CLCMHG
Trigger: TCCATGCATACATAGACACAAGACACACACGCTCAA...CCTTCTGGAGAAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR GCA 72 bp TCTCCAGAAGGCTCCCCTCTGCAGTTTGGTCTCAGATaGTGGGAAGTGTTGTCTCTGACATGTCCACTGGGA +
Preference number: 3 (lower is better)
Translates to: SPEGSPLQFGLR*WEVLSLTCPLG
Trigger: TCCCAGTGGACATGTCAGAGACAACACTTCCCAGCATCTGAGACCAAACTGCAGAGGGGAGCCTTCTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR GCA 72 bp GCTATTTGGGGTCTCTTGAAATTCCCTGTCCCTTCTTaGTCCTACGCATACCTCGCCAAACCCTCACACCCT +
Preference number: 3 (lower is better)
Translates to: AIWGLLKFPVPS*SYAYLAKPSHP
Trigger: AGGGTGTGAGGGTTTGGCGAGGTATGCGTAGGAGCAAGAAGGGACAGGGAATTTCAAGAGACCCCAAATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR CAA 90 bp AGGGTAACAATACTCTCCAACGATAAAGTCACACAGCTGGGAGTGCTGAACAGGGTGTGTGTGTATGCTTaGCCCCCGACGTTCCAGTTC +
Preference number: 3 (lower is better)
Translates to: RVTILSNDKVTQLGVLNRVCVYA*PPTFQF
Trigger: GAACTGGAACGTCGGGGGCAAAGCATACACACACAC...CCTGTTCAGCACTCCCAGCTGTGTGACTTTATCGTTGGAGAGTATTGTTACCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR CAA 90 bp TGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTCTTGCAAGTATGTATGGTaGTATATGTGGACAGGGGTT +
Preference number: 3 (lower is better)
Translates to: WELWKPSVYCWARGMEVSCKYVW*YMWTGV
Trigger: AACCCCTGTCCACATATACAACCATACATACTTGCA...AGACACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR CAA 90 bp TGCCTTTGGGCAGGATTGTCCCCAACCATCACTGGAAGCCTACGCACTCCCTTCTGCAAGTATGTATGGTaGTATATGTGGACAGGGGTT +
Preference number: 3 (lower is better)
Translates to: CLWAGLSPTITGSLRTPFCKYVW*YMWTGV
Trigger: AACCCCTGTCCACATATACAACCATACATACTTGCA...GAAGGGAGTGCGTAGGCTTCCAGTGATGGTTGGGGACAATCCTGCCCAAAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
3UTR TCA 72 bp TACTCTCCAACGATAAAGTCACACAGCTGGGAGTGCTaGACAGGATGGGAAGAAGGTTTCTTCCCAGGTCAC +
Preference number: 3 (lower is better)
Translates to: YSPTIKSHSWEC*TGWEEGFFPGH
Trigger: GTGACCTGGGAAGAAACCTTCTTCCCATCCTGTTCAGCACTCCCAGCTGTGTGACTTTATCGTTGGAGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR CAA 90 bp TCAGGAATCTTAAAATTTAGACTCTGGCTCACCAGGTCTGGAATGAGACCTGAGGTGTGTGTGTATGCTTaGCCCCCGACGTTCCAGTTC +
Preference number: 3 (lower is better)
Translates to: SGILKFRLWLTRSGMRPEVCVYA*PPTFQF
Trigger: GAACTGGAACGTCGGGGGCAAAGCATACACACACAC...CTCAGGTCTCATTCCAGACCTGGTGAGCCAGAGTCTAAATTTTAAGATTCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR TCA 72 bp TATGCTTTGCCCCCGACGTTCCAGTTCAGGAAAGCTTaGATCACGCAGAGTAGCACTGAACTCTTTCTGCAT +
Preference number: 3 (lower is better)
Translates to: YALPPTFQFRKA*ITQSSTELFLH
Trigger: ATGCAGAAAGAGTTCAGTGCTACTCTGCGTGATTCAAGCTTTCCTGAACTGGAACGTCGGGGGCAAAGCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR CCA 72 bp CAGGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTaGTGTCTGTGTCTGCGTGTGTACATGAACACACAT +
Preference number: 3 (lower is better)
Translates to: QVCVCVCVYVCV*CLCLRVYMNTH
Trigger: ATGTGTGTTCATGTACACACGCAGACACAGACACCACACACACACATACACACACACACACACACACACCTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR CAA 90 bp TATGGTTGTATATGTGGACAGGGGTTTGAGCGTGTGTGTCTTGTGTCTATGTATGTGTGTGTGTATGCTTaGCCCCCGACGTTCCAGTTC +
Preference number: 3 (lower is better)
Translates to: YGCICGQGFERVCLVSMYVCVYA*PPTFQF
Trigger: GAACTGGAACGTCGGGGGCAAAGCATACACACACAC...ATACATAGACACAAGACACACACGCTCAAACCCCTGTCCACATATACAACCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR CAA 90 bp ACACTGCTGCCGGGCCATGCTCTGAGTAACAAGGATATAGACAGCCTGTTTACCTGCAAGTATGTATGGTaGTATATGTGGACAGGGGTT +
Preference number: 3 (lower is better)
Translates to: TLLPGHALSNKDIDSLFTCKYVW*YMWTGV
Trigger: AACCCCTGTCCACATATACAACCATACATACTTGCA...GGTAAACAGGCTGTCTATATCCTTGTTACTCAGAGCATGGCCCGGCAGCAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR CAA 90 bp CAATCATCAGGAATCTTAAAATTTAGACTCTGGCTCACCAGGTCTGGAATGAGACAGCAGTCCTCAAGCTaGGCTCCCATCTGCCACAGT +
Preference number: 3 (lower is better)
Translates to: QSSGILKFRLWLTRSGMRQQSSS*APICHS
Trigger: ACTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCTG...TCTCATTCCAGACCTGGTGAGCCAGAGTCTAAATTTTAAGATTCCTGATGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR GCA 72 bp TATTCTGCTTTATTCACTTTCATAGCTAAGCATAGATaGCAGTGGTCACCTGCCCTTGGCACCATCCTTTTG +
Preference number: 3 (lower is better)
Translates to: YSALFTFIAKHR*QWSPALGTILL
Trigger: CAAAAGGATGGTGCCAAGGGCAGGTGACCACTGGCATCTATGCTTAGCTATGAAAGTGAATAAAGCAGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
3UTR TCA 72 bp TGCAAGTATGTATGGTTGTATATGTGGACAGGGGTTTaGGCGTGTGTGTCTTGTGTCTATGTATGCATGGAT +
Preference number: 3 (lower is better)
Translates to: CKYVWLYMWTGV*ACVSCVYVCMD
Trigger: ATCCATGCATACATAGACACAAGACACACACGCTCAAACCCCTGTCCACATATACAACCATACATACTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR CCA 72 bp ACATGCCAATCATCAGGAATCTTAAAATTTAGACTCTaGCTCACCAGGTCTGGAATGAGACCTGAGATTCTC +
Preference number: 3 (lower is better)
Translates to: TCQSSGILKFRL*LTRSGMRPEIL
Trigger: GAGAATCTCAGGTCTCATTCCAGACCTGGTGAGCCAGAGTCTAAATTTTAAGATTCCTGATGATTGGCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR CAA 90 bp CCTTGGCACCATCCTTTTGTAGTTATATATGTGTTTGTACAATTCCTTGGTGCAGCTATTTGGGGTCTCTaGAAATTCCCTGTCCCTTCT +
Preference number: 3 (lower is better)
Translates to: PWHHPFVVIYVFVQFLGAAIWGL*KFPVPS
Trigger: AGAAGGGACAGGGAATTTCAAGAGACCCCAAATAGC...TGCACCAAGGAATTGTACAAACACATATATAACTACAAAAGGATGGTGCCAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
3UTR GCA 72 bp GTAGTTATATATGTGTTTGTACAATTCCTTGGTGCATaGCTATTTTCTTCCCCACCAACCTCTAAGCTCCAC +
Preference number: 3 (lower is better)
Translates to: VVIYVFVQFLGA*LFSSPPTSKLH
Trigger: GTGGAGCTTAGAGGTTGGTGGGGAAGAAAATAGGCATGCACCAAGGAATTGTACAAACACATATATAACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
3UTR-3UTR CAA 90 bp CAATCATCAGGAATCTTAAAATTTAGACTCTGGCTCACCAGGTCTGGAATGAGATGCAAGTATGTATGGTaGTATATGTGGACAGGGGTT +
Preference number: 3 (lower is better)
Translates to: QSSGILKFRLWLTRSGMRCKYVW*YMWTGV
Trigger: AACCCCTGTCCACATATACAACCATACATACTTGCA...TCTCATTCCAGACCTGGTGAGCCAGAGTCTAAATTTTAAGATTCCTGATGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR GCA 72 bp GGGAATTACAGCAGCACTTCTCAAATTTGGGTAACATaGCAATCATCAGGAATCTTAAAATTTAGACTCTGG +
Preference number: 3 (lower is better)
Translates to: GNYSSTSQIWVT*QSSGILKFRLW
Trigger: CCAGAGTCTAAATTTTAAGATTCCTGATGATTGGCATGTTACCCAAATTTGAGAAGTGCTGCTGTAATTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
3UTR CCA 72 bp TCCTTTAAGGGGAATTACAGCAGCACTTCTCAAATTTaGGTAACATGCCAATCATCAGGAATCTTAAAATTT +
Preference number: 3 (lower is better)
Translates to: SFKGNYSSTSQI*VTCQSSGILKF
Trigger: AAATTTTAAGATTCCTGATGATTGGCATGTTACCCAAATTTGAGAAGTGCTGCTGTAATTCCCCTTAAAGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp AGGTCACCAGCAGTCCTCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGACCGGGCTCTCTGCCCTaGGCTGGTGCTCTCCGTCGC +
Preference number: 4 (lower is better)
Translates to: RSPAVLKLGSHLPQWLVRPGSLP*AGALRR
Trigger: GCGACGGAGAGCACCAGCGCAGGGCAGAGAGCCCGG...TCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCTGGTGACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356545.7
CDS-3UTR GCA 90 bp AAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTCTTCTGGTGGCCTCAGGTGTCTGCCCTGCGCTGGTaGTCTCCGTCGCGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: KCVLLGPRDGSVFWWPQVSALRW*SPSRLR
Trigger: GCGGAGGCGCGACGGAGAGCACCAGCGCAGGGCAGA...CACCTGAGGCCACCAGAAGACACTTCCATCCCTCGGGCCCAGCAGTACACACTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356545.7
CDS-3UTR CCA 90 bp AGGTCACCAGCAGTCCTCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGACTCTCTGCCCTGCGCTaGTGCTCTCCGTCGCGCCTC +
Preference number: 4 (lower is better)
Translates to: RSPAVLKLGSHLPQWLVRLSALR*CSPSRL
Trigger: GAGGCGCGACGGAGAGCACCAGCGCAGGGCAGAGAG...TCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCTGGTGACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356545.7
CDS-3UTR GCA 90 bp CCACTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTTCGCTCCGGGCTCTCTaGCCTGCGCTGGTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: PLGALETKCVLLGPRDGSSLRAL*PALVLS
Trigger: GGAGAGCACCAGCGCAGGGCAGAGAGCCCGGAGCGA...ACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356545.7
CDS-3UTR CCA 90 bp CCTCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTCTCCTCCTGCTGCAAGATaGCCGGGGCCCTTTCTCCCG +
Preference number: 4 (lower is better)
Translates to: PQAWLPSATVAGPIPAASPPAAR*PGPFLP
Trigger: CGGGAGAAAGGGCCCCGGCCATCTTGCAGCAGGAGG...AGAAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp TTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTCTCCAGAAGGCCTCCTGCTGCAAGATaGCCGGGGCCCTTTCTCCCG +
Preference number: 4 (lower is better)
Translates to: LAPICHSGWSDPSSFSRRPPAAR*PGPFLP
Trigger: CGGGAGAAAGGGCCCCGGCCATCTTGCAGCAGGAGG...CCTTCTGGAGAAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp GTCCTCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTATCTCAGCTTCGTGCTaGCAGTCGCGACGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: VLKLGSHLPQWLVRSQQLISASC*QSRRGQ
Trigger: CTGCCCCCGTCGCGACTGGCAGCACGAAGCTGAGAT...AAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp ACCAGAATCCCTCCTGCTGCAAGATGGCCGGGGCCCTTTCTCCCGTCCTTTAAGCAGGAGGCCCAGGCCTaGGCCGTAGCCCAAATCCAC +
Preference number: 4 (lower is better)
Translates to: TRIPPAARWPGPFLPSFKQEAQA*AVAQIH
Trigger: GTGGATTTGGGCTACGGCCCAGGCCTGGGCCTCCTG...CTTAAAGGACGGGAGAAAGGGCCCCGGCCATCTTGCAGCAGGAGGGATTCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356545.7
ENST00000612451.4
CDS-3UTR CCA 90 bp TCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTCTCCGCCCTCGGGACAAGCTaGATAGCAGCGGCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: SSLAPICHSGWSDPSSFSALGTS*IAAALV
Trigger: CACAAGGGCCGCTGCTATCCAGCTTGTCCCGAGGGC...GGAGAAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp AGGTTTCTTCCCAGGTCACCAGCAGTCCTCAAGCTTGGCTCCCATCTGCCACAGGGGCATGTAGCACCCTaGGTGTCCGCTCCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: RFLPRSPAVLKLGSHLPQGHVAP*VSAPRS
Trigger: GCTCCGAGGAGCGGACACGCAGGGTGCTACATGCCC...CTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCTGGTGACCTGGGAAGAAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000615459.4
CDS-3UTR GCA 90 bp TGTCCACTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGATCCCTAGGCAGGCCCTaGAGATGTGAGTGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: CPLGALETKCVLLGPRDGSLGRP*RCEWPH
Trigger: GTGGGGCCACTCACATCTGCAGGGCCTGCCTAGGGA...TCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAGTGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp TCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTCTCCGGGACAGAGAGGGTGTaGGGAGCCCAGTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: SSLAPICHSGWSDPSSFSGTERV*GAQFSI
Trigger: GATGGAGAACTGGGCTCCCCACACCCTCTCTGTCCC...GGAGAAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
CDS-3UTR CCA 90 bp TGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTCTCAGGAGGCCCAGGCCTaGGCCGTAGCCCAAATCCAC +
Preference number: 4 (lower is better)
Translates to: WELWKPSVYCWARGMEVSQEAQA*AVAQIH
Trigger: GTGGATTTGGGCTACGGCCCAGGCCTGGGCCTCCTG...AGACACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
CDS-3UTR CCA 90 bp TTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTCTCCAGAAGGTGGTCTCGGGGAGGGTaGATAGCACACGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: LAPICHSGWSDPSSFSRRWSRGG*IAHGSC
Trigger: GCAAGAGCCGTGTGCTATCCACCCTCCCCGAGACCA...CCTTCTGGAGAAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
CDS-3UTR CCA 90 bp TCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTCTCCTGGTCTCGGGGAGGGTaGATAGCACACGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: SSLAPICHSGWSDPSSFSWSRGG*IAHGSC
Trigger: GCAAGAGCCGTGTGCTATCCACCCTCCCCGAGACCA...GGAGAAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
CDS-3UTR CCA 90 bp TGCCTTTGGGCAGGATTGTCCCCAACCATCACTGGAAGCCTACGCACTCCCTTCCCCTGGTCGGAGGGGTaGTCTCGGGGAGGGTGGATA +
Preference number: 4 (lower is better)
Translates to: CLWAGLSPTITGSLRTPFPWSEG*SRGGWI
Trigger: TATCCACCCTCCCCGAGACCACCCCTCCGACCAGGG...GAAGGGAGTGCGTAGGCTTCCAGTGATGGTTGGGGACAATCCTGCCCAAAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000356545.7
ENST00000612451.4
CDS-3UTR CCA 90 bp CCACTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTCCTTTGGCACAGGCCTaGCTCCCCTCGGCACTGATC +
Preference number: 4 (lower is better)
Translates to: PLGALETKCVLLGPRDGSPLAQA*LPSALI
Trigger: GATCAGTGCCGAGGGGAGCCAGGCCTGTGCCAAAGG...ACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
CDS-3UTR CCA 90 bp GTCCTCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTAAGCAGACGCCCACCTaGCGGATGTCGTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: VLKLGSHLPQWLVRSQQLKQTPT*RMSFLS
Trigger: GGAGAGGAACGACATCCGCCAGGTGGGCGTCTGCTT...AAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp ACCAGAATCCCTCCTGCTGCAAGATGGCCGGGGCCCTTTCTCCCGTCCTTTAAGGCCCTCGGGACAAGCTaGATAGCAGCGGCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: TRIPPAARWPGPFLPSFKALGTS*IAAALV
Trigger: CACAAGGGCCGCTGCTATCCAGCTTGTCCCGAGGGC...CTTAAAGGACGGGAGAAAGGGCCCCGGCCATCTTGCAGCAGGAGGGATTCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp TCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTCTCCCCCTGCAGATGTGAGTaGCCCCACTGTCCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: SSLAPICHSGWSDPSSFSPCRCE*PHCPLL
Trigger: CAGCAAGGGACAGTGGGGCCACTCACATCTGCAGGG...GGAGAAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp AAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTCTTCTGGTGGCCTCAGGTGAGTCCTTGCCAGCGGTaGTCTTCTGGCCCACTCCCA +
Preference number: 4 (lower is better)
Translates to: KCVLLGPRDGSVFWWPQVSPCQR*SSGPLP
Trigger: TGGGAGTGGGCCAGAAGATCACCGCTGGCAAGGACT...CACCTGAGGCCACCAGAAGACACTTCCATCCCTCGGGCCCAGCAGTACACACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp TGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTCTCAGGCCCTGCAGATGTaGGTGGCCCCACTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: WELWKPSVYCWARGMEVSQALQM*VAPLSL
Trigger: AAGGGACAGTGGGGCCACTCACATCTGCAGGGCCTG...AGACACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp CATACCTCGCCAAACCCTCACACCCTGCAAAGGAATGTGGTGCCTGTGTCTACTCAGCACCCGAGCGGATaGCCTACTCTGGCCGGTCGC +
Preference number: 4 (lower is better)
Translates to: HTSPNPHTLQRNVVPVSTQHPSG*PTLAGR
Trigger: GCGACCGGCCAGAGTAGGGCATCCGCTCGGGTGCTG...AGTAGACACAGGCACCACATTCCTTTGCAGGGTGTGAGGGTTTGGCGAGGTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356545.7
CDS-3UTR GCA 90 bp ACACTGCTGCCGGGCCATGCTCTGAGTAACAAGGATATAGACAGCCTGTTTACCGGGGCGGCTCGGAGCTaGCCTCGTTCTCCGCAGCAC +
Preference number: 4 (lower is better)
Translates to: TLLPGHALSNKDIDSLFTGAARS*PRSPQH
Trigger: GTGCTGCGGAGAACGAGGGCAGCTCCGAGCCGCCCC...GGTAAACAGGCTGTCTATATCCTTGTTACTCAGAGCATGGCCCGGCAGCAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356545.7
CDS-3UTR GCA 90 bp TGTCCACTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGACGCCCGTTCCCAAGTTaGTCAATCTGCGGACGGCTC +
Preference number: 4 (lower is better)
Translates to: CPLGALETKCVLLGPRDGRPFPS*SICGRL
Trigger: GAGCCGTCCGCAGATTGAGCAACTTGGGAACGGGCG...TCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAGTGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356545.7
CDS-3UTR GCA 90 bp AAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTCTTCTGGTGGCCTCAGGTGACAATCTCAGCTTCGTaGTGCCAGTCGCGACGGGGG +
Preference number: 4 (lower is better)
Translates to: KCVLLGPRDGSVFWWPQVTISAS*CQSRRG
Trigger: CCCCCGTCGCGACTGGCAGCACGAAGCTGAGATTGT...CACCTGAGGCCACCAGAAGACACTTCCATCCCTCGGGCCCAGCAGTACACACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp CCTCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTCTGCACTGATCCGCCTCTaGCTTTTCCCCTTGATCCCC +
Preference number: 4 (lower is better)
Translates to: PQAWLPSATVAGPIPAASALIRL*LFPLIP
Trigger: GGGGATCAAGGGGAAAAGGCAGAGGCGGATCAGTGC...AGAAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
CDS-3UTR GCA 90 bp AAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTCTTCTGGTGGCCTCAGGTGGCACTCTCCTCACTGTaGACCTCCGGGTCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: KCVLLGPRDGSVFWWPQVALSSL*TSGSPW
Trigger: CCAAGGAGACCCGGAGGTGCACAGTGAGGAGAGTGC...CACCTGAGGCCACCAGAAGACACTTCCATCCCTCGGGCCCAGCAGTACACACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000615459.4
CDS-3UTR GCA 90 bp TCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTCTCCTGCTGCTGCTGTTGCTaGCCCTTGCGTCTTCGAGAG +
Preference number: 4 (lower is better)
Translates to: SSLAPICHSGWSDPSSFSCCCCC*PLRLRE
Trigger: CTCTCGAAGACGCAAGGGGCAGCAACAGCAGCAGCA...GGAGAAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp TTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTCTCCAGAAGGTGCTGCTGCTGCTGTTaGTGCCCCTTGCGTCTTCGA +
Preference number: 4 (lower is better)
Translates to: LAPICHSGWSDPSSFSRRCCCCC*CPLRLR
Trigger: TCGAAGACGCAAGGGGCAGCAACAGCAGCAGCAGCA...CCTTCTGGAGAAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp TTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTCTCCAGAAGGAGCTTGGCTCCCATCTaGCACAGTGGCTGGTCCGAT +
Preference number: 4 (lower is better)
Translates to: LAPICHSGWSDPSSFSRRSLAPI*HSGWSD
Trigger: ATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCT...CCTTCTGGAGAAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp GCTTCTCCAGAAGGCTCCCCTCTGCAGTTTGGTCTCAGATGCTGGGAAGTGTTGCAGGAGGCCCAGGCCTaGGCCGTAGCCCAAATCCAC +
Preference number: 4 (lower is better)
Translates to: ASPEGSPLQFGLRCWEVLQEAQA*AVAQIH
Trigger: GTGGATTTGGGCTACGGCCCAGGCCTGGGCCTCCTG...CAACACTTCCCAGCATCTGAGACCAAACTGCAGAGGGGAGCCTTCTGGAGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
CDS-3UTR CCA 90 bp AAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTCTTCTGGTGGCCTCAGGTGTGGTCTCGGGGAGGGTaGATAGCACACGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: KCVLLGPRDGSVFWWPQVWSRGG*IAHGSC
Trigger: GCAAGAGCCGTGTGCTATCCACCCTCCCCGAGACCA...CACCTGAGGCCACCAGAAGACACTTCCATCCCTCGGGCCCAGCAGTACACACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
CDS-3UTR CCA 90 bp CTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTCAAGCAGACGCCCACCTaGCGGATGTCGTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: LGALETKCVLLGPRDGSVKQTPT*RMSFLS
Trigger: GGAGAGGAACGACATCCGCCAGGTGGGCGTCTGCTT...GACACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp ACCAGAATCCCTCCTGCTGCAAGATGGCCGGGGCCCTTTCTCCCGTCCTTTAAGTCAGAGCAGGCAGCATaGTCCCCCACAGGGGCATGT +
Preference number: 4 (lower is better)
Translates to: TRIPPAARWPGPFLPSFKSEQAA*SPTGAC
Trigger: ACATGCCCCTGTGGGGGACCATGCTGCCTGCTCTGA...CTTAAAGGACGGGAGAAAGGGCCCCGGCCATCTTGCAGCAGGAGGGATTCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356545.7
ENST00000615459.4
CDS-3UTR CCA 90 bp AGGTTTCTTCCCAGGTCACCAGCAGTCCTCAAGCTTGGCTCCCATCTGCCACAGGCTGGGCCCGAGGGATaGAAGTGTCTTCTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: RFLPRSPAVLKLGSHLPQAGPEG*KCLLVA
Trigger: GGCCACCAGAAGACACTTCCATCCCTCGGGCCCAGC...CTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCTGGTGACCTGGGAAGAAACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp TGTCCACTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGATCCCATCTGCCACAGTaGCTGGTCCGATCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: CPLGALETKCVLLGPRDGSHLPQ*LVRSQQ
Trigger: CTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGA...TCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAGTGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR CAA 72 bp GAAGGTTTCTTCCCAGGTCACCAGCAGTCCTCAAGCTaGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCC +
Preference number: 4 (lower is better)
Translates to: EGFFPGHQQSSS*APICHSGWSDP
Trigger: GGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCTGGTGACCTGGGAAGAAACCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp GTCCTCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTTGGCCCACTCCCACCTaGATCACCAGGAAACCACAA +
Preference number: 4 (lower is better)
Translates to: VLKLGSHLPQWLVRSQQLWPTPT*ITRKPQ
Trigger: TTGTGGTTTCCTGGTGATTCAGGTGGGAGTGGGCCA...AAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp TTTTCTTCCCCACCAACCTCTAAGCTCCACAAGAGCAAGGCCCGTGTTTGGCTCGGCTCCCCTCGGCACTaGTCCGCCTCTGCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: FSSPPTSKLHKSKARVWLGSPRH*SASAFS
Trigger: GGAAAAGGCAGAGGCGGATCAGTGCCGAGGGGAGCC...GAGCCAAACACGGGCCTTGCTCTTGTGGAGCTTAGAGGTTGGTGGGGAAGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000356545.7
ENST00000612451.4
CDS-3UTR TCA 90 bp TTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTCTCCAGAAGGTCCTCTCCAGCAGGATaGACAGCTTGGGTGAGCACT +
Preference number: 4 (lower is better)
Translates to: LAPICHSGWSDPSSFSRRSSPAG*TAWVST
Trigger: AGTGCTCACCCAAGCTGTTCATCCTGCTGGAGAGGA...CCTTCTGGAGAAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp CCACTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTCTGCTGATGGTGAGGTaGGTCCAGCTCAGAACCAGG +
Preference number: 4 (lower is better)
Translates to: PLGALETKCVLLGPRDGSLLMVR*VQLRTR
Trigger: CCTGGTTCTGAGCTGGACGCACCTCACCATCAGCAG...ACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
CDS-3UTR GCA 90 bp TGTCCACTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGACTGCTGATGGTGAGGTaGGTCCAGCTCAGAACCAGG +
Preference number: 4 (lower is better)
Translates to: CPLGALETKCVLLGPRDGLLMVR*VQLRTR
Trigger: CCTGGTTCTGAGCTGGACGCACCTCACCATCAGCAG...TCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAGTGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
CDS-3UTR GCA 90 bp TGTCCACTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAGCACTGATCCGCCTCTaGCTTTTCCCCTTGATCCCC +
Preference number: 4 (lower is better)
Translates to: CPLGALETKCVLLGPRDGALIRL*LFPLIP
Trigger: GGGGATCAAGGGGAAAAGGCAGAGGCGGATCAGTGC...TCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAGTGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
CDS-3UTR GCA 90 bp TTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTCTCCAGAAGGTGTTCATGTCGGGGTTaGGGGCGTCGAAGTATCCAG +
Preference number: 4 (lower is better)
Translates to: LAPICHSGWSDPSSFSRRCSCRG*GRRSIQ
Trigger: CTGGATACTTCGACGCCCGCAACCCCGACATGAACA...CCTTCTGGAGAAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp CCTCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTCTTACTGCACTCCATGGTaGCATTGGCAGCTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: PQAWLPSATVAGPIPAASYCTPW*HWQLRS
Trigger: GCTCCTCAGCTGCCAATGGCACCATGGAGTGCAGTA...AGAAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp TGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTCTGCTGTTGCTGCCCCTTaGGTCTTCGAGAGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: WELWKPSVYCWARGMEVSAVAAP*VFESQH
Trigger: GTGCTGGCTCTCGAAGACGCAAGGGGCAGCAACAGC...AGACACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp TGCCTTTGGGCAGGATTGTCCCCAACCATCACTGGAAGCCTACGCACTCCCTTCGCTGTTGCTGCCCCTTaGGTCTTCGAGAGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: CLWAGLSPTITGSLRTPFAVAAP*VFESQH
Trigger: GTGCTGGCTCTCGAAGACGCAAGGGGCAGCAACAGC...GAAGGGAGTGCGTAGGCTTCCAGTGATGGTTGGGGACAATCCTGCCCAAAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp CCACTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTTGCTGCTGCTGCTGTTaGTGCCCCTTGCGTCTTCGA +
Preference number: 4 (lower is better)
Translates to: PLGALETKCVLLGPRDGSCCCCC*CPLRLR
Trigger: TCGAAGACGCAAGGGGCAGCAACAGCAGCAGCAGCA...ACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp CCACTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTACTGTCCCTTGCTGCTaGTGCTGTTGCTGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: PLGALETKCVLLGPRDGSTVPCC*CCCCPL
Trigger: CAAGGGGCAGCAACAGCAGCAGCAGCAAGGGACAGT...ACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp CTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTCACTGTCCCTTGCTGCTaGTGCTGTTGCTGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: LGALETKCVLLGPRDGSVTVPCC*CCCCPL
Trigger: CAAGGGGCAGCAACAGCAGCAGCAGCAAGGGACAGT...GACACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp CTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTCAGCTTGGCTCCCATCTaGCACAGTGGCTGGTCCGAT +
Preference number: 4 (lower is better)
Translates to: LGALETKCVLLGPRDGSVSLAPI*HSGWSD
Trigger: ATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCT...GACACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp AAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTCTTCTGGTGGCCTCAGGTGAGCTTGGCTCCCATCTaGCACAGTGGCTGGTCCGAT +
Preference number: 4 (lower is better)
Translates to: KCVLLGPRDGSVFWWPQVSLAPI*HSGWSD
Trigger: ATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCT...CACCTGAGGCCACCAGAAGACACTTCCATCCCTCGGGCCCAGCAGTACACACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp TGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTCTAAGCAGACGCCCACCTaGCGGATGTCGTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: WELWKPSVYCWARGMEVSKQTPT*RMSFLS
Trigger: GGAGAGGAACGACATCCGCCAGGTGGGCGTCTGCTT...AGACACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp TGCCTTTGGGCAGGATTGTCCCCAACCATCACTGGAAGCCTACGCACTCCCTTCCCCTGCAGATGTGAGTaGCCCCACTGTCCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: CLWAGLSPTITGSLRTPFPCRCE*PHCPLL
Trigger: CAGCAAGGGACAGTGGGGCCACTCACATCTGCAGGG...GAAGGGAGTGCGTAGGCTTCCAGTGATGGTTGGGGACAATCCTGCCCAAAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp GCTTCTCCAGAAGGCTCCCCTCTGCAGTTTGGTCTCAGATGCTGGGAAGTGTTGGCTGGGCCCGAGGGATaGAAGTGTCTTCTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: ASPEGSPLQFGLRCWEVLAGPEG*KCLLVA
Trigger: GGCCACCAGAAGACACTTCCATCCCTCGGGCCCAGC...CAACACTTCCCAGCATCTGAGACCAAACTGCAGAGGGGAGCCTTCTGGAGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp GTCCTCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTAGCAGTCCTCAAGCTTaGCTCCCATCTGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: VLKLGSHLPQWLVRSQQLSSPQA*LPSATV
Trigger: CACTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCT...AAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp CCTACGCACTCCCTTCCCCTGGCAGTGCCACTAGCCCTTCAGTATATAGATTCTCCTCCTGCTGCAAGATaGCCGGGGCCCTTTCTCCCG +
Preference number: 4 (lower is better)
Translates to: PTHSLPLAVPLALQYIDSPPAAR*PGPFLP
Trigger: CGGGAGAAAGGGCCCCGGCCATCTTGCAGCAGGAGG...AGAATCTATATACTGAAGGGCTAGTGGCACTGCCAGGGGAAGGGAGTGCGTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp GATTGGAGTGTGTGTGTATGCTTTGCCCCCGACGTTCCAGTTCAGGAAAGCTTGGGCTCCCCTCGGCACTaGTCCGCCTCTGCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: DWSVCVCFAPDVPVQESLGSPRH*SASAFS
Trigger: GGAAAAGGCAGAGGCGGATCAGTGCCGAGGGGAGCC...CAAGCTTTCCTGAACTGGAACGTCGGGGGCAAAGCATACACACACACTCCAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
CDS-3UTR TCA 90 bp TGTCCACTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAGATGAACAGCTTGGGTaGGCACTTGAGGCAGCCGTT +
Preference number: 4 (lower is better)
Translates to: CPLGALETKCVLLGPRDGDEQLG*ALEAAV
Trigger: AACGGCTGCCTCAAGTGCTCACCCAAGCTGTTCATC...TCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAGTGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp GTCCTCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTTGCAGAAGTTATGGCTaGAGCAGGCCTCACAGTGCT +
Preference number: 4 (lower is better)
Translates to: VLKLGSHLPQWLVRSQQLCRSYG*SRPHSA
Trigger: AGCACTGTGAGGCCTGCTTCAGCCATAACTTCTGCA...AAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp AGGTCACCAGCAGTCCTCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGATGCAGAAGTTATGGCTaGAGCAGGCCTCACAGTGCT +
Preference number: 4 (lower is better)
Translates to: RSPAVLKLGSHLPQWLVRCRSYG*SRPHSA
Trigger: AGCACTGTGAGGCCTGCTTCAGCCATAACTTCTGCA...TCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCTGGTGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp TGTCCACTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGACACAGCTGGGAGTGCTaGACAGGATGGGAAGAAGGT +
Preference number: 4 (lower is better)
Translates to: CPLGALETKCVLLGPRDGHSWEC*TGWEEG
Trigger: ACCTTCTTCCCATCCTGTTCAGCACTCCCAGCTGTG...TCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAGTGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp AGGTCACCAGCAGTCCTCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGAGTCCTCCTTTATAGCTaGCCAGAATCCCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: RSPAVLKLGSHLPQWLVRVLLYS*PESLLL
Trigger: CAGCAGGAGGGATTCTGGTCAGCTATAAAGGAGGAC...TCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCTGGTGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp TGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTCTGCACTGATCCGCCTCTaGCTTTTCCCCTTGATCCCC +
Preference number: 4 (lower is better)
Translates to: WELWKPSVYCWARGMEVSALIRL*LFPLIP
Trigger: GGGGATCAAGGGGAAAAGGCAGAGGCGGATCAGTGC...AGACACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
CDS-3UTR GCA 90 bp ACCAGAATCCCTCCTGCTGCAAGATGGCCGGGGCCCTTTCTCCCGTCCTTTAAGTGTTCATGTCGGGGTTaGGGGCGTCGAAGTATCCAG +
Preference number: 4 (lower is better)
Translates to: TRIPPAARWPGPFLPSFKCSCRG*GRRSIQ
Trigger: CTGGATACTTCGACGCCCGCAACCCCGACATGAACA...CTTAAAGGACGGGAGAAAGGGCCCCGGCCATCTTGCAGCAGGAGGGATTCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp CTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTCTGTTCATGTCGGGGTTaGGGGCGTCGAAGTATCCAG +
Preference number: 4 (lower is better)
Translates to: LGALETKCVLLGPRDGSVCSCRG*GRRSIQ
Trigger: CTGGATACTTCGACGCCCGCAACCCCGACATGAACA...GACACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp AGGTTTCTTCCCAGGTCACCAGCAGTCCTCAAGCTTGGCTCCCATCTGCCACAGACTGTCCCTTGCTGCTaGTGCTGTTGCTGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: RFLPRSPAVLKLGSHLPQTVPCC*CCCCPL
Trigger: CAAGGGGCAGCAACAGCAGCAGCAGCAAGGGACAGT...CTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCTGGTGACCTGGGAAGAAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp TTCTCCAGAAGGCTCCCCTCTGCAGTTTGGTCTCAGATGCTGGGAAGTGTTGTCTCCCTAGGCAGGCCCTaGAGATGTGAGTGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: FSRRLPSAVWSQMLGSVVSLGRP*RCEWPH
Trigger: GTGGGGCCACTCACATCTGCAGGGCCTGCCTAGGGA...GACAACACTTCCCAGCATCTGAGACCAAACTGCAGAGGGGAGCCTTCTGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp CTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTCGCACTGAACTCTTTCTaGATGGGCCTGGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: LGALETKCVLLGPRDGSVALNSF*MGLEAG
Trigger: TCCAGCCTCCAGGCCCATGCAGAAAGAGTTCAGTGC...GACACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp CCTCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTCTCAAACCCTCACACCCTaGAAAGGAATGTGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: PQAWLPSATVAGPIPAASQTLTP*KGMWCL
Trigger: CAGGCACCACATTCCTTTGCAGGGTGTGAGGGTTTG...AGAAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp AGGTCACCAGCAGTCCTCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGACAAACCCTCACACCCTaGAAAGGAATGTGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: RSPAVLKLGSHLPQWLVRQTLTP*KGMWCL
Trigger: CAGGCACCACATTCCTTTGCAGGGTGTGAGGGTTTG...TCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCTGGTGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp CCACTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTTTCCCTGTCCCTTCTTaGTCCTACGCATACCTCGCC +
Preference number: 4 (lower is better)
Translates to: PLGALETKCVLLGPRDGSFPVPS*SYAYLA
Trigger: GGCGAGGTATGCGTAGGAGCAAGAAGGGACAGGGAA...ACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp CTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTCTTCCCTGTCCCTTCTTaGTCCTACGCATACCTCGCC +
Preference number: 4 (lower is better)
Translates to: LGALETKCVLLGPRDGSVFPVPS*SYAYLA
Trigger: GGCGAGGTATGCGTAGGAGCAAGAAGGGACAGGGAA...GACACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp ACCAGAATCCCTCCTGCTGCAAGATGGCCGGGGCCCTTTCTCCCGTCCTTTAAGTCTGCCCAGGACTACTaGACTCCATGGTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: TRIPPAARWPGPFLPSFKSAQDY*TPWCHW
Trigger: CCAATGGCACCATGGAGTGCAGTAGTCCTGGGCAGA...CTTAAAGGACGGGAGAAAGGGCCCCGGCCATCTTGCAGCAGGAGGGATTCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612451.4
CDS-3UTR CCA 90 bp TGGATGGATTGGAGTGTGTGTGTATGCTTTGCCCCCGACGTTCCAGTTCAGGAACCCTGGTCGGAGGGGTaGTCTCGGGGAGGGTGGATA +
Preference number: 4 (lower is better)
Translates to: WMDWSVCVCFAPDVPVQEPWSEG*SRGGWI
Trigger: TATCCACCCTCCCCGAGACCACCCCTCCGACCAGGG...TTCCTGAACTGGAACGTCGGGGGCAAAGCATACACACACACTCCAATCCATCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
CDS-3UTR CCA 90 bp GAAGGCTCCCCTCTGCAGTTTGGTCTCAGATGCTGGGAAGTGTTGTCTCTGACACCTTTGGCACAGGCCTaGCTCCCCTCGGCACTGATC +
Preference number: 4 (lower is better)
Translates to: EGSPLQFGLRCWEVLSLTPLAQA*LPSALI
Trigger: GATCAGTGCCGAGGGGAGCCAGGCCTGTGCCAAAGG...TGTCAGAGACAACACTTCCCAGCATCTGAGACCAAACTGCAGAGGGGAGCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
CDS-3UTR CCA 90 bp CATACCTCGCCAAACCCTCACACCCTGCAAAGGAATGTGGTGCCTGTGTCTACTCCTTTGGCACAGGCCTaGCTCCCCTCGGCACTGATC +
Preference number: 4 (lower is better)
Translates to: HTSPNPHTLQRNVVPVSTPLAQA*LPSALI
Trigger: GATCAGTGCCGAGGGGAGCCAGGCCTGTGCCAAAGG...AGTAGACACAGGCACCACATTCCTTTGCAGGGTGTGAGGGTTTGGCGAGGTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
CDS-3UTR CCA 90 bp GAGATTCTCATTCCTAACAAGCTGCCCTGTGACAACACTGCTGCCGGGCCATGCAGAGCTCACAGCCTTTaGCACAGGCCTGGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: EILIPNKLPCDNTAAGPCRAHSL*HRPGSP
Trigger: AGGGGAGCCAGGCCTGTGCCAAAGGCTGTGAGCTCT...GCATGGCCCGGCAGCAGTGTTGTCACAGGGCAGCTTGTTAGGAATGAGAATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp CCTACGCACTCCCTTCCCCTGGCAGTGCCACTAGCCCTTCAGTATATAGATTCTGCCCTCGGGACAAGCTaGATAGCAGCGGCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: PTHSLPLAVPLALQYIDSALGTS*IAAALV
Trigger: CACAAGGGCCGCTGCTATCCAGCTTGTCCCGAGGGC...AGAATCTATATACTGAAGGGCTAGTGGCACTGCCAGGGGAAGGGAGTGCGTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp TGTCCACTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAGACTACTGCACTCCATaGTGCCATTGGCAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: CPLGALETKCVLLGPRDGDYCTP*CHWQLR
Trigger: CCTCAGCTGCCAATGGCACCATGGAGTGCAGTAGTC...TCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAGTGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp TGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTCTACCTCCGGGTCTCCTTaGTGTCAGAGCAGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: WELWKPSVYCWARGMEVSTSGSP*CQSRQH
Trigger: ATGCTGCCTGCTCTGACACCAAGGAGACCCGGAGGT...AGACACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000615459.4
CDS-3UTR CCA 90 bp GAAGGCTCCCCTCTGCAGTTTGGTCTCAGATGCTGGGAAGTGTTGTCTCTGACATGGCCAGGTTCCTGTTaGCATTCTCCCGCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: EGSPLQFGLRCWEVLSLTWPGSC*HSPAGP
Trigger: AGGGCCGGCGGGAGAATGCCAACAGGAACCTGGCCA...TGTCAGAGACAACACTTCCCAGCATCTGAGACCAAACTGCAGAGGGGAGCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp TTCTCCAGAAGGCTCCCCTCTGCAGTTTGGTCTCAGATGCTGGGAAGTGTTGTCTGGCCAGGTTCCTGTTaGCATTCTCCCGCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: FSRRLPSAVWSQMLGSVVWPGSC*HSPAGP
Trigger: AGGGCCGGCGGGAGAATGCCAACAGGAACCTGGCCA...GACAACACTTCCCAGCATCTGAGACCAAACTGCAGAGGGGAGCCTTCTGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp TGTCCACTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGACCTTGCTCTCCTTCCTaGCCAGGTTCCTGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: CPLGALETKCVLLGPRDGPCSPS*PGSCWH
Trigger: ATGCCAACAGGAACCTGGCCAGGAAGGAGAGCAAGG...TCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAGTGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp TTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTCTCCAGAAGGGGAAGTGTCTTCTGGTaGCCTCAGGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: LAPICHSGWSDPSSFSRRGSVFW*PQVCVC
Trigger: ACACACACACACCTGAGGCCACCAGAAGACACTTCC...CCTTCTGGAGAAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp AGGTCACCAGCAGTCCTCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGAGGAAGTGTCTTCTGGTaGCCTCAGGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: RSPAVLKLGSHLPQWLVRGSVFW*PQVCVC
Trigger: ACACACACACACCTGAGGCCACCAGAAGACACTTCC...TCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCTGGTGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp GTCCTCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTGTCCACTGGGAGCTCTaGAAACCAAGTGTGTACTGC +
Preference number: 4 (lower is better)
Translates to: VLKLGSHLPQWLVRSQQLVHWEL*KPSVYC
Trigger: GCAGTACACACTTGGTTTCCAGAGCTCCCAGTGGAC...AAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp AGGTCACCAGCAGTCCTCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGACTCCCCTCTGCAGTTTaGTCTCAGATGCTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: RSPAVLKLGSHLPQWLVRLPSAV*SQMLGS
Trigger: ACTTCCCAGCATCTGAGACCAAACTGCAGAGGGGAG...TCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCTGGTGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp CCTCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTCTCCCTGCAAAGGAATGTaGTGCCTGTGTCTACTGCTG +
Preference number: 4 (lower is better)
Translates to: PQAWLPSATVAGPIPAASPCKGM*CLCLLL
Trigger: CAGCAGTAGACACAGGCACCACATTCCTTTGCAGGG...AGAAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp ACACTGCTGCCGGGCCATGCTCTGAGTAACAAGGATATAGACAGCCTGTTTACCCAGGCCCTGCAGATGTaGGTGGCCCCACTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: TLLPGHALSNKDIDSLFTQALQM*VAPLSL
Trigger: AAGGGACAGTGGGGCCACTCACATCTGCAGGGCCTG...GGTAAACAGGCTGTCTATATCCTTGTTACTCAGAGCATGGCCCGGCAGCAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp CTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTCTCTTCCTTGTCTGCATaGCCCTCTACTGAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: LGALETKCVLLGPRDGSVSSLSA*PSTEQA
Trigger: AGCCTGCTCAGTAGAGGGTCATGCAGACAAGGAAGA...GACACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp CCACTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTTCTTCCTTGTCTGCATaGCCCTCTACTGAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: PLGALETKCVLLGPRDGSSSLSA*PSTEQA
Trigger: AGCCTGCTCAGTAGAGGGTCATGCAGACAAGGAAGA...ACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp GAGATTCTCATTCCTAACAAGCTGCCCTGTGACAACACTGCTGCCGGGCCATGCCTGCTGATGGTGAGGTaGGTCCAGCTCAGAACCAGG +
Preference number: 4 (lower is better)
Translates to: EILIPNKLPCDNTAAGPCLLMVR*VQLRTR
Trigger: CCTGGTTCTGAGCTGGACGCACCTCACCATCAGCAG...GCATGGCCCGGCAGCAGTGTTGTCACAGGGCAGCTTGTTAGGAATGAGAATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
CDS-3UTR GCA 90 bp TGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTCTTGTTCATGTCGGGGTTaGGGGCGTCGAAGTATCCAG +
Preference number: 4 (lower is better)
Translates to: WELWKPSVYCWARGMEVSCSCRG*GRRSIQ
Trigger: CTGGATACTTCGACGCCCGCAACCCCGACATGAACA...AGACACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp TTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTCTCCAGAAGGTCGCTCATTTCACATTaGGCAGGACTACTGCACTCC +
Preference number: 4 (lower is better)
Translates to: LAPICHSGWSDPSSFSRRSLISH*AGLLHS
Trigger: GGAGTGCAGTAGTCCTGCGCAATGTGAAATGAGCGA...CCTTCTGGAGAAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000615459.4
CDS-3UTR GCA 90 bp GGAAGTGTTGTCTCTGACATGTCCACTGGGAGCTCTGGAAACCAAGTGTGTACTGGGCATGTAGCACCCTaGGTGTCCGCTCCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: GSVVSDMSTGSSGNQVCTGHVAP*VSAPRS
Trigger: GCTCCGAGGAGCGGACACGCAGGGTGCTACATGCCC...AGTACACACTTGGTTTCCAGAGCTCCCAGTGGACATGTCAGAGACAACACTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000615459.4
CDS-3UTR GCA 90 bp GAAGGCTCCCCTCTGCAGTTTGGTCTCAGATGCTGGGAAGTGTTGTCTCTGACAGTCCCTTGCTGCTGCTaGTGTTGCTGCCCCTTGCGT +
Preference number: 4 (lower is better)
Translates to: EGSPLQFGLRCWEVLSLTVPCCC*CCCPLR
Trigger: ACGCAAGGGGCAGCAACAGCAGCAGCAGCAAGGGAC...TGTCAGAGACAACACTTCCCAGCATCTGAGACCAAACTGCAGAGGGGAGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp CAGTTTGGTCTCAGATGCTGGGAAGTGTTGTCTCTGACATGTCCACTGGGAGCTCCCACTGTCCCTTGCTaGTGCTGCTGTTGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: QFGLRCWEVLSLTCPLGAPTVPC*CCCCCP
Trigger: GGGGCAGCAACAGCAGCAGCAGCAAGGGACAGTGGG...AGCTCCCAGTGGACATGTCAGAGACAACACTTCCCAGCATCTGAGACCAAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp AGGTTTCTTCCCAGGTCACCAGCAGTCCTCAAGCTTGGCTCCCATCTGCCACAGGCACTGAACTCTTTCTaGATGGGCCTGGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: RFLPRSPAVLKLGSHLPQALNSF*MGLEAG
Trigger: TCCAGCCTCCAGGCCCATGCAGAAAGAGTTCAGTGC...CTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCTGGTGACCTGGGAAGAAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp TGTCCACTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAAACCAAGTGTGTACTaGTGGGCCCGAGGGATGGAA +
Preference number: 4 (lower is better)
Translates to: CPLGALETKCVLLGPRDGKPSVY*WARGME
Trigger: TTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTT...TCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAGTGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp ACCAGAATCCCTCCTGCTGCAAGATGGCCGGGGCCCTTTCTCCCGTCCTTTAAGAAACCAAGTGTGTACTaGTGGGCCCGAGGGATGGAA +
Preference number: 4 (lower is better)
Translates to: TRIPPAARWPGPFLPSFKKPSVY*WARGME
Trigger: TTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTT...CTTAAAGGACGGGAGAAAGGGCCCCGGCCATCTTGCAGCAGGAGGGATTCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp TGTCCACTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGACAGAAGGCTCCCCTCTaGAGTTTGGTCTCAGATGCT +
Preference number: 4 (lower is better)
Translates to: CPLGALETKCVLLGPRDGQKAPL*SLVSDA
Trigger: AGCATCTGAGACCAAACTGCAGAGGGGAGCCTTCTG...TCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAGTGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp TCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTCTCCTGCAAAGGAATGTGGTaGCTGTGTCTACTGCTGTCG +
Preference number: 4 (lower is better)
Translates to: SSLAPICHSGWSDPSSFSCKGMW*LCLLLS
Trigger: CGACAGCAGTAGACACAGGCACCACATTCCTTTGCA...GGAGAAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp AGGTTTCTTCCCAGGTCACCAGCAGTCCTCAAGCTTGGCTCCCATCTGCCACAGTTCCCTGTCCCTTCTTaGTCCTACGCATACCTCGCC +
Preference number: 4 (lower is better)
Translates to: RFLPRSPAVLKLGSHLPQFPVPS*SYAYLA
Trigger: GGCGAGGTATGCGTAGGAGCAAGAAGGGACAGGGAA...CTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCTGGTGACCTGGGAAGAAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp TGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTCTTTCCCTGTCCCTTCTTaGTCCTACGCATACCTCGCC +
Preference number: 4 (lower is better)
Translates to: WELWKPSVYCWARGMEVSFPVPS*SYAYLA
Trigger: GGCGAGGTATGCGTAGGAGCAAGAAGGGACAGGGAA...AGACACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp AGGTCACCAGCAGTCCTCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGAAGTTATTCCATCCACTaGCCTGCCTTTGGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: RSPAVLKLGSHLPQWLVRSYSIH*PAFGQD
Trigger: ATCCTGCCCAAAGGCAGGGCAGTGGATGGAATAACT...TCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCTGGTGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp GAAGGCTCCCCTCTGCAGTTTGGTCTCAGATGCTGGGAAGTGTTGTCTCTGACAGGGACAGAGAGGGTGTaGGGAGCCCAGTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: EGSPLQFGLRCWEVLSLTGTERV*GAQFSI
Trigger: GATGGAGAACTGGGCTCCCCACACCCTCTCTGTCCC...TGTCAGAGACAACACTTCCCAGCATCTGAGACCAAACTGCAGAGGGGAGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
CDS-3UTR CCA 90 bp GGACAGGGGTTTGAGCGTGTGTGTCTTGTGTCTATGTATGCATGGATGGATTGGCCCTGGTCGGAGGGGTaGTCTCGGGGAGGGTGGATA +
Preference number: 4 (lower is better)
Translates to: GQGFERVCLVSMYAWMDWPWSEG*SRGGWI
Trigger: TATCCACCCTCCCCGAGACCACCCCTCCGACCAGGG...CCAATCCATCCATGCATACATAGACACAAGACACACACGCTCAAACCCCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
CDS-3UTR CCA 90 bp CCTACGCACTCCCTTCCCCTGGCAGTGCCACTAGCCCTTCAGTATATAGATTCTAGAGCTCACAGCCTTTaGCACAGGCCTGGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: PTHSLPLAVPLALQYIDSRAHSL*HRPGSP
Trigger: AGGGGAGCCAGGCCTGTGCCAAAGGCTGTGAGCTCT...AGAATCTATATACTGAAGGGCTAGTGGCACTGCCAGGGGAAGGGAGTGCGTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp GATTGGAGTGTGTGTGTATGCTTTGCCCCCGACGTTCCAGTTCAGGAAAGCTTGGCCCTCGGGACAAGCTaGATAGCAGCGGCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: DWSVCVCFAPDVPVQESLALGTS*IAAALV
Trigger: CACAAGGGCCGCTGCTATCCAGCTTGTCCCGAGGGC...CAAGCTTTCCTGAACTGGAACGTCGGGGGCAAAGCATACACACACACTCCAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp CCACTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGATGGAAGTGTCTTCTaGTGGCCTCAGGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: PLGALETKCVLLGPRDGSDGSVF*WPQVCV
Trigger: CACACACACCTGAGGCCACCAGAAGACACTTCCATC...ACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp ACACTGCTGCCGGGCCATGCTCTGAGTAACAAGGATATAGACAGCCTGTTTACCGCTGGGCCCGAGGGATaGAAGTGTCTTCTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: TLLPGHALSNKDIDSLFTAGPEG*KCLLVA
Trigger: GGCCACCAGAAGACACTTCCATCCCTCGGGCCCAGC...GGTAAACAGGCTGTCTATATCCTTGTTACTCAGAGCATGGCCCGGCAGCAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp CCTACGCACTCCCTTCCCCTGGCAGTGCCACTAGCCCTTCAGTATATAGATTCTTCCCATCTGCCACAGTaGCTGGTCCGATCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PTHSLPLAVPLALQYIDSSHLPQ*LVRSQQ
Trigger: CTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGA...AGAATCTATATACTGAAGGGCTAGTGGCACTGCCAGGGGAAGGGAGTGCGTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp ACACTGCTGCCGGGCCATGCTCTGAGTAACAAGGATATAGACAGCCTGTTTACCCCTTTGGCACAGGCCTaGCTCCCCTCGGCACTGACT +
Preference number: 4 (lower is better)
Translates to: TLLPGHALSNKDIDSLFTPLAQA*LPSALT
Trigger: AGTCAGTGCCGAGGGGAGCCAGGCCTGTGCCAAAGG...GGTAAACAGGCTGTCTATATCCTTGTTACTCAGAGCATGGCCCGGCAGCAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615459.4
CDS-3UTR TCA 90 bp GCTTCTCCAGAAGGCTCCCCTCTGCAGTTTGGTCTCAGATGCTGGGAAGTGTTGGGGAAGTGTTGTCTCTaGCATGTCCACTGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: ASPEGSPLQFGLRCWEVLGKCCL*HVHWEL
Trigger: GAGCTCCCAGTGGACATGTCAGAGACAACACTTCCC...CAACACTTCCCAGCATCTGAGACCAAACTGCAGAGGGGAGCCTTCTGGAGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp AGGTCACCAGCAGTCCTCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCACCAGGTCTGGAATaGGACCTGAGATTCTCATTC +
Preference number: 4 (lower is better)
Translates to: RSPAVLKLGSHLPQWLVRSPGLE*DLRFSF
Trigger: GAATGAGAATCTCAGGTCTCATTCCAGACCTGGTGA...TCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCTGGTGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp TGGATGGATTGGAGTGTGTGTGTATGCTTTGCCCCCGACGTTCCAGTTCAGGAAACAATCTCAGCTTCGTaGTGCCAGTCGCGACGGGGG +
Preference number: 4 (lower is better)
Translates to: WMDWSVCVCFAPDVPVQETISAS*CQSRRG
Trigger: CCCCCGTCGCGACTGGCAGCACGAAGCTGAGATTGT...TTCCTGAACTGGAACGTCGGGGGCAAAGCATACACACACACTCCAATCCATCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp AAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTCTTCTGGTGGCCTCAGGTGTCGCTCATTTCACATTaGGCAGGACTACTGCACTCC +
Preference number: 4 (lower is better)
Translates to: KCVLLGPRDGSVFWWPQVSLISH*AGLLHS
Trigger: GGAGTGCAGTAGTCCTGCGCAATGTGAAATGAGCGA...CACCTGAGGCCACCAGAAGACACTTCCATCCCTCGGGCCCAGCAGTACACACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000615459.4
CDS-3UTR GCA 90 bp TTTTCTTCCCCACCAACCTCTAAGCTCCACAAGAGCAAGGCCCGTGTTTGGCTCTGCTGCTGCTGTTGCTaGCCCTTGCGTCTTCGAGAG +
Preference number: 4 (lower is better)
Translates to: FSSPPTSKLHKSKARVWLCCCCC*PLRLRE
Trigger: CTCTCGAAGACGCAAGGGGCAGCAACAGCAGCAGCA...GAGCCAAACACGGGCCTTGCTCTTGTGGAGCTTAGAGGTTGGTGGGGAAGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp TGGATGGATTGGAGTGTGTGTGTATGCTTTGCCCCCGACGTTCCAGTTCAGGAAGTCCCTTGCTGCTGCTaGTGTTGCTGCCCCTTGCGT +
Preference number: 4 (lower is better)
Translates to: WMDWSVCVCFAPDVPVQEVPCCC*CCCPLR
Trigger: ACGCAAGGGGCAGCAACAGCAGCAGCAGCAAGGGAC...TTCCTGAACTGGAACGTCGGGGGCAAAGCATACACACACACTCCAATCCATCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp GGACAGGGGTTTGAGCGTGTGTGTCTTGTGTCTATGTATGCATGGATGGATTGGTCCCTAGGCAGGCCCTaGAGATGTGAGTGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: GQGFERVCLVSMYAWMDWSLGRP*RCEWPH
Trigger: GTGGGGCCACTCACATCTGCAGGGCCTGCCTAGGGA...CCAATCCATCCATGCATACATAGACACAAGACACACACGCTCAAACCCCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp GAGATTCTCATTCCTAACAAGCTGCCCTGTGACAACACTGCTGCCGGGCCATGCGCACTGAACTCTTTCTaGATGGGCCTGGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: EILIPNKLPCDNTAAGPCALNSF*MGLEAG
Trigger: TCCAGCCTCCAGGCCCATGCAGAAAGAGTTCAGTGC...GCATGGCCCGGCAGCAGTGTTGTCACAGGGCAGCTTGTTAGGAATGAGAATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp TGCCTTTGGGCAGGATTGTCCCCAACCATCACTGGAAGCCTACGCACTCCCTTCAAACCAAGTGTGTACTaGTGGGCCCGAGGGATGGAA +
Preference number: 4 (lower is better)
Translates to: CLWAGLSPTITGSLRTPFKPSVY*WARGME
Trigger: TTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTT...GAAGGGAGTGCGTAGGCTTCCAGTGATGGTTGGGGACAATCCTGCCCAAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp AGGTTTCTTCCCAGGTCACCAGCAGTCCTCAAGCTTGGCTCCCATCTGCCACAGCAGAAGGCTCCCCTCTaGAGTTTGGTCTCAGATGCT +
Preference number: 4 (lower is better)
Translates to: RFLPRSPAVLKLGSHLPQQKAPL*SLVSDA
Trigger: AGCATCTGAGACCAAACTGCAGAGGGGAGCCTTCTG...CTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCTGGTGACCTGGGAAGAAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp TGCCTTTGGGCAGGATTGTCCCCAACCATCACTGGAAGCCTACGCACTCCCTTCCAAACCCTCACACCCTaGAAAGGAATGTGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: CLWAGLSPTITGSLRTPFQTLTP*KGMWCL
Trigger: CAGGCACCACATTCCTTTGCAGGGTGTGAGGGTTTG...GAAGGGAGTGCGTAGGCTTCCAGTGATGGTTGGGGACAATCCTGCCCAAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp GTCCTCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTTCATTCCTAACAAGCTaGCCTGTGACAACACTGCTG +
Preference number: 4 (lower is better)
Translates to: VLKLGSHLPQWLVRSQQLSFLTS*PVTTLL
Trigger: CAGCAGTGTTGTCACAGGGCAGCTTGTTAGGAATGA...AAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp AAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTCTTCTGGTGGCCTCAGGTGTTGGTGCAGAAGTTATaGCTGAAGCAGGCCTCACAG +
Preference number: 4 (lower is better)
Translates to: KCVLLGPRDGSVFWWPQVLVQKL*LKQASQ
Trigger: CTGTGAGGCCTGCTTCAGCCATAACTTCTGCACCAA...CACCTGAGGCCACCAGAAGACACTTCCATCCCTCGGGCCCAGCAGTACACACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp CAGTTTGGTCTCAGATGCTGGGAAGTGTTGTCTCTGACATGTCCACTGGGAGCTTCAGAGCAGGCAGCATaGTCCCCCACAGGGGCATGT +
Preference number: 4 (lower is better)
Translates to: QFGLRCWEVLSLTCPLGASEQAA*SPTGAC
Trigger: ACATGCCCCTGTGGGGGACCATGCTGCCTGCTCTGA...AGCTCCCAGTGGACATGTCAGAGACAACACTTCCCAGCATCTGAGACCAAACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000615459.4
CDS-3UTR CCA 90 bp TTCTCCAGAAGGCTCCCCTCTGCAGTTTGGTCTCAGATGCTGGGAAGTGTTGTCACCTCCGGGTCTCCTTaGTGTCAGAGCAGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: FSRRLPSAVWSQMLGSVVTSGSP*CQSRQH
Trigger: ATGCTGCCTGCTCTGACACCAAGGAGACCCGGAGGT...GACAACACTTCCCAGCATCTGAGACCAAACTGCAGAGGGGAGCCTTCTGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000615459.4
CDS-3UTR CCA 90 bp GCTTCTCCAGAAGGCTCCCCTCTGCAGTTTGGTCTCAGATGCTGGGAAGTGTTGCCTTGCTCTCCTTCCTaGCCAGGTTCCTGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: ASPEGSPLQFGLRCWEVLPCSPS*PGSCWH
Trigger: ATGCCAACAGGAACCTGGCCAGGAAGGAGAGCAAGG...CAACACTTCCCAGCATCTGAGACCAAACTGCAGAGGGGAGCCTTCTGGAGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp TGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTCTGGAAGTGTCTTCTGGTaGCCTCAGGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: WELWKPSVYCWARGMEVSGSVFW*PQVCVC
Trigger: ACACACACACACCTGAGGCCACCAGAAGACACTTCC...AGACACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp CATACCTCGCCAAACCCTCACACCCTGCAAAGGAATGTGGTGCCTGTGTCTACTATCTGCCACAGTGGCTaGTCCGATCCCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: HTSPNPHTLQRNVVPVSTICHSG*SDPSSF
Trigger: GAAGCTGCTGGGATCGGACCAGCCACTGTGGCAGAT...AGTAGACACAGGCACCACATTCCTTTGCAGGGTGTGAGGGTTTGGCGAGGTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp TTCTCCAGAAGGCTCCCCTCTGCAGTTTGGTCTCAGATGCTGGGAAGTGTTGTCTGGCCCACTCCCACCTaGATCACCAGGAAACCACAA +
Preference number: 4 (lower is better)
Translates to: FSRRLPSAVWSQMLGSVVWPTPT*ITRKPQ
Trigger: TTGTGGTTTCCTGGTGATTCAGGTGGGAGTGGGCCA...GACAACACTTCCCAGCATCTGAGACCAAACTGCAGAGGGGAGCCTTCTGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp TTTTCTTCCCCACCAACCTCTAAGCTCCACAAGAGCAAGGCCCGTGTTTGGCTCTGGCCCACTCCCACCTaGATCACCAGGAAACCACAA +
Preference number: 4 (lower is better)
Translates to: FSSPPTSKLHKSKARVWLWPTPT*ITRKPQ
Trigger: TTGTGGTTTCCTGGTGATTCAGGTGGGAGTGGGCCA...GAGCCAAACACGGGCCTTGCTCTTGTGGAGCTTAGAGGTTGGTGGGGAAGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp CCTACGCACTCCCTTCCCCTGGCAGTGCCACTAGCCCTTCAGTATATAGATTCTGATGAACAGCTTGGGTaGGCACTTGAGGCAGCCGTT +
Preference number: 4 (lower is better)
Translates to: PTHSLPLAVPLALQYIDSDEQLG*ALEAAV
Trigger: AACGGCTGCCTCAAGTGCTCACCCAAGCTGTTCATC...AGAATCTATATACTGAAGGGCTAGTGGCACTGCCAGGGGAAGGGAGTGCGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp CCACTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTCAGTTCAGGAAAGCTTaGATCACGCAGAGTAGCACT +
Preference number: 4 (lower is better)
Translates to: PLGALETKCVLLGPRDGSQFRKA*ITQSST
Trigger: AGTGCTACTCTGCGTGATTCAAGCTTTCCTGAACTG...ACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp GGAAGTGTTGTCTCTGACATGTCCACTGGGAGCTCTGGAAACCAAGTGTGTACTCCAAGTTGCTCAATCTaGGGACGGCTCACGCCCTCG +
Preference number: 4 (lower is better)
Translates to: GSVVSDMSTGSSGNQVCTPSCSI*GRLTPS
Trigger: CGAGGGCGTGAGCCGTCCGCAGATTGAGCAACTTGG...AGTACACACTTGGTTTCCAGAGCTCCCAGTGGACATGTCAGAGACAACACTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356545.7
CDS-3UTR GCA 90 bp AGGGTAACAATACTCTCCAACGATAAAGTCACACAGCTGGGAGTGCTGAACAGGATCTCAGCTTCGTGCTaGCAGTCGCGACGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RVTILSNDKVTQLGVLNRISASC*QSRRGQ
Trigger: CTGCCCCCGTCGCGACTGGCAGCACGAAGCTGAGAT...CCTGTTCAGCACTCCCAGCTGTGTGACTTTATCGTTGGAGAGTATTGTTACCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp GCTTCTCCAGAAGGCTCCCCTCTGCAGTTTGGTCTCAGATGCTGGGAAGTGTTGATTGCGCAGGACTACTaGACTCCATGGTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: ASPEGSPLQFGLRCWEVLIAQDY*TPWCHW
Trigger: CCAATGGCACCATGGAGTGCAGTAGTCCTGCGCAAT...CAACACTTCCCAGCATCTGAGACCAAACTGCAGAGGGGAGCCTTCTGGAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000615459.4
CDS-3UTR GCA 90 bp TGCCTTTGGGCAGGATTGTCCCCAACCATCACTGGAAGCCTACGCACTCCCTTCTCGCTCATTTCACATTaGGCAGGACTACTGCACTCC +
Preference number: 4 (lower is better)
Translates to: CLWAGLSPTITGSLRTPFSLISH*AGLLHS
Trigger: GGAGTGCAGTAGTCCTGCGCAATGTGAAATGAGCGA...GAAGGGAGTGCGTAGGCTTCCAGTGATGGTTGGGGACAATCCTGCCCAAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356545.7
ENST00000615459.4
CDS-3UTR GCA 90 bp GGACAGGGGTTTGAGCGTGTGTGTCTTGTGTCTATGTATGCATGGATGGATTGGGCTGTTGCTGCCCCTTaGGTCTTCGAGAGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: GQGFERVCLVSMYAWMDWAVAAP*VFESQH
Trigger: GTGCTGGCTCTCGAAGACGCAAGGGGCAGCAACAGC...CCAATCCATCCATGCATACATAGACACAAGACACACACGCTCAAACCCCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp TGGATGGATTGGAGTGTGTGTGTATGCTTTGCCCCCGACGTTCCAGTTCAGGAATGCTGCTGCTGTTGCTaGCCCTTGCGTCTTCGAGAG +
Preference number: 4 (lower is better)
Translates to: WMDWSVCVCFAPDVPVQECCCCC*PLRLRE
Trigger: CTCTCGAAGACGCAAGGGGCAGCAACAGCAGCAGCA...TTCCTGAACTGGAACGTCGGGGGCAAAGCATACACACACACTCCAATCCATCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp AGGGTAACAATACTCTCCAACGATAAAGTCACACAGCTGGGAGTGCTGAACAGGCCCACTGTCCCTTGCTaGTGCTGCTGTTGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: RVTILSNDKVTQLGVLNRPTVPC*CCCCCP
Trigger: GGGGCAGCAACAGCAGCAGCAGCAAGGGACAGTGGG...CCTGTTCAGCACTCCCAGCTGTGTGACTTTATCGTTGGAGAGTATTGTTACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp CATACCTCGCCAAACCCTCACACCCTGCAAAGGAATGTGGTGCCTGTGTCTACTGCACTGAACTCTTTCTaGATGGGCCTGGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: HTSPNPHTLQRNVVPVSTALNSF*MGLEAG
Trigger: TCCAGCCTCCAGGCCCATGCAGAAAGAGTTCAGTGC...AGTAGACACAGGCACCACATTCCTTTGCAGGGTGTGAGGGTTTGGCGAGGTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp AGGTTTCTTCCCAGGTCACCAGCAGTCCTCAAGCTTGGCTCCCATCTGCCACAGTGTGTGTGTATGCTTTaGCCCCGACGTTCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: RFLPRSPAVLKLGSHLPQCVCML*PRRSSS
Trigger: TGAACTGGAACGTCGGGGGCAAAGCATACACACACA...CTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCTGGTGACCTGGGAAGAAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp CTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTCCAGTTTGGTCTCAGATaGTGGGAAGTGTTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: LGALETKCVLLGPRDGSVQFGLR*WEVLSL
Trigger: CAGAGACAACACTTCCCAGCATCTGAGACCAAACTG...GACACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp TGTCCACTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGACAGTTTGGTCTCAGATaGTGGGAAGTGTTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: CPLGALETKCVLLGPRDGQFGLR*WEVLSL
Trigger: CAGAGACAACACTTCCCAGCATCTGAGACCAAACTG...TCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAGTGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp TGTCCACTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGATCATTCCTAACAAGCTaGCCTGTGACAACACTGCTG +
Preference number: 4 (lower is better)
Translates to: CPLGALETKCVLLGPRDGSFLTS*PVTTLL
Trigger: CAGCAGTGTTGTCACAGGGCAGCTTGTTAGGAATGA...TCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAGTGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp TGCCTTTGGGCAGGATTGTCCCCAACCATCACTGGAAGCCTACGCACTCCCTTCAGTTATTCCATCCACTaGCCTGCCTTTGGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: CLWAGLSPTITGSLRTPFSYSIH*PAFGQD
Trigger: ATCCTGCCCAAAGGCAGGGCAGTGGATGGAATAACT...GAAGGGAGTGCGTAGGCTTCCAGTGATGGTTGGGGACAATCCTGCCCAAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp GGAAGTGTTGTCTCTGACATGTCCACTGGGAGCTCTGGAAACCAAGTGTGTACTAAGCAGACGCCCACCTaGCGGATGTCGTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: GSVVSDMSTGSSGNQVCTKQTPT*RMSFLS
Trigger: GGAGAGGAACGACATCCGCCAGGTGGGCGTCTGCTT...AGTACACACTTGGTTTCCAGAGCTCCCAGTGGACATGTCAGAGACAACACTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp CCACCGTCAGAGCAGCCCCTAAGTTTTCTTCCTTGTCTGCATGACCCTCTACTGGACTACTGCACTCCATaGTGCCATTGGCAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: PPSEQPLSFLPCLHDPLLDYCTP*CHWQLR
Trigger: CCTCAGCTGCCAATGGCACCATGGAGTGCAGTAGTC...CAGTAGAGGGTCATGCAGACAAGGAAGAAAACTTAGGGGCTGCTCTGACGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp TTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTCTCCAGAAGGTTTGGTCTCAGATGCTaGGAAGTGTTGTCTCTGACA +
Preference number: 4 (lower is better)
Translates to: LAPICHSGWSDPSSFSRRFGLRC*EVLSLT
Trigger: TGTCAGAGACAACACTTCCCAGCATCTGAGACCAAA...CCTTCTGGAGAAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp CAGTTTGGTCTCAGATGCTGGGAAGTGTTGTCTCTGACATGTCCACTGGGAGCTATCTGCCACAGTGGCTaGTCCGATCCCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: QFGLRCWEVLSLTCPLGAICHSG*SDPSSF
Trigger: GAAGCTGCTGGGATCGGACCAGCCACTGTGGCAGAT...AGCTCCCAGTGGACATGTCAGAGACAACACTTCCCAGCATCTGAGACCAAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp GGAAGTGTTGTCTCTGACATGTCCACTGGGAGCTCTGGAAACCAAGTGTGTACTTCCCATCTGCCACAGTaGCTGGTCCGATCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GSVVSDMSTGSSGNQVCTSHLPQ*LVRSQQ
Trigger: CTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGA...AGTACACACTTGGTTTCCAGAGCTCCCAGTGGACATGTCAGAGACAACACTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp TTCTCCAGAAGGCTCCCCTCTGCAGTTTGGTCTCAGATGCTGGGAAGTGTTGTCAGCAGTCCTCAAGCTTaGCTCCCATCTGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: FSRRLPSAVWSQMLGSVVSSPQA*LPSATV
Trigger: CACTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCT...GACAACACTTCCCAGCATCTGAGACCAAACTGCAGAGGGGAGCCTTCTGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp ACACTGCTGCCGGGCCATGCTCTGAGTAACAAGGATATAGACAGCCTGTTTACCGATGAACAGCTTGGGTaGGCACTTGAGGCAGCCGTT +
Preference number: 4 (lower is better)
Translates to: TLLPGHALSNKDIDSLFTDEQLG*ALEAAV
Trigger: AACGGCTGCCTCAAGTGCTCACCCAAGCTGTTCATC...GGTAAACAGGCTGTCTATATCCTTGTTACTCAGAGCATGGCCCGGCAGCAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp ACACTGCTGCCGGGCCATGCTCTGAGTAACAAGGATATAGACAGCCTGTTTACCTCCTCTCCAGCAGGATaGACAGCTTGGGTGAGCACT +
Preference number: 4 (lower is better)
Translates to: TLLPGHALSNKDIDSLFTSSPAG*TAWVST
Trigger: AGTGCTCACCCAAGCTGTTCATCCTGCTGGAGAGGA...GGTAAACAGGCTGTCTATATCCTTGTTACTCAGAGCATGGCCCGGCAGCAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp GATTGGAGTGTGTGTGTATGCTTTGCCCCCGACGTTCCAGTTCAGGAAAGCTTGTCCTCTCCAGCAGGATaGACAGCTTGGGTGAGCACT +
Preference number: 4 (lower is better)
Translates to: DWSVCVCFAPDVPVQESLSSPAG*TAWVST
Trigger: AGTGCTCACCCAAGCTGTTCATCCTGCTGGAGAGGA...CAAGCTTTCCTGAACTGGAACGTCGGGGGCAAAGCATACACACACACTCCAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp CATACCTCGCCAAACCCTCACACCCTGCAAAGGAATGTGGTGCCTGTGTCTACTTGCAGAAGTTATGGCTaGAGCAGGCCTCACAGTGCT +
Preference number: 4 (lower is better)
Translates to: HTSPNPHTLQRNVVPVSTCRSYG*SRPHSA
Trigger: AGCACTGTGAGGCCTGCTTCAGCCATAACTTCTGCA...AGTAGACACAGGCACCACATTCCTTTGCAGGGTGTGAGGGTTTGGCGAGGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp AGTAACAAGGATATAGACAGCCTGTTTACCACCGTCAGAGCAGCCCCTAAGTTTCAGGCCCTGCAGATGTaGGTGGCCCCACTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: SNKDIDSLFTTVRAAPKFQALQM*VAPLSL
Trigger: AAGGGACAGTGGGGCCACTCACATCTGCAGGGCCTG...AAACTTAGGGGCTGCTCTGACGGTGGTAAACAGGCTGTCTATATCCTTGTTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp TGGATGGATTGGAGTGTGTGTGTATGCTTTGCCCCCGACGTTCCAGTTCAGGAAGGGAAGTGTTGTCTCTaGCATGTCCACTGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: WMDWSVCVCFAPDVPVQEGKCCL*HVHWEL
Trigger: GAGCTCCCAGTGGACATGTCAGAGACAACACTTCCC...TTCCTGAACTGGAACGTCGGGGGCAAAGCATACACACACACTCCAATCCATCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp ACACTGCTGCCGGGCCATGCTCTGAGTAACAAGGATATAGACAGCCTGTTTACCGGGAAGTGTTGTCTCTaGCATGTCCACTGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: TLLPGHALSNKDIDSLFTGKCCL*HVHWEL
Trigger: GAGCTCCCAGTGGACATGTCAGAGACAACACTTCCC...GGTAAACAGGCTGTCTATATCCTTGTTACTCAGAGCATGGCCCGGCAGCAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp CATACCTCGCCAAACCCTCACACCCTGCAAAGGAATGTGGTGCCTGTGTCTACTTGCATGACCCTCTACTaGGCAGGCTATTTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: HTSPNPHTLQRNVVPVSTCMTLY*AGYLGS
Trigger: AGACCCCAAATAGCCTGCTCAGTAGAGGGTCATGCA...AGTAGACACAGGCACCACATTCCTTTGCAGGGTGTGAGGGTTTGGCGAGGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp TTTTCTTCCCCACCAACCTCTAAGCTCCACAAGAGCAAGGCCCGTGTTTGGCTCTCTTCCTTGTCTGCATaGCCCTCTACTGAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: FSSPPTSKLHKSKARVWLSSLSA*PSTEQA
Trigger: AGCCTGCTCAGTAGAGGGTCATGCAGACAAGGAAGA...GAGCCAAACACGGGCCTTGCTCTTGTGGAGCTTAGAGGTTGGTGGGGAAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp AGGGTAACAATACTCTCCAACGATAAAGTCACACAGCTGGGAGTGCTGAACAGGACAATCTCAGCTTCGTaGTGCCAGTCGCGACGGGGG +
Preference number: 4 (lower is better)
Translates to: RVTILSNDKVTQLGVLNRTISAS*CQSRRG
Trigger: CCCCCGTCGCGACTGGCAGCACGAAGCTGAGATTGT...CCTGTTCAGCACTCCCAGCTGTGTGACTTTATCGTTGGAGAGTATTGTTACCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp CCACCGTCAGAGCAGCCCCTAAGTTTTCTTCCTTGTCTGCATGACCCTCTACTGATTGCGCAGGACTACTaGACTCCATGGTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: PPSEQPLSFLPCLHDPLLIAQDY*TPWCHW
Trigger: CCAATGGCACCATGGAGTGCAGTAGTCCTGCGCAAT...CAGTAGAGGGTCATGCAGACAAGGAAGAAAACTTAGGGGCTGCTCTGACGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000615459.4
CDS-3UTR GCA 90 bp AGGGTAACAATACTCTCCAACGATAAAGTCACACAGCTGGGAGTGCTGAACAGGGCTGTTGCTGCCCCTTaGGTCTTCGAGAGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: RVTILSNDKVTQLGVLNRAVAAP*VFESQH
Trigger: GTGCTGGCTCTCGAAGACGCAAGGGGCAGCAACAGC...CCTGTTCAGCACTCCCAGCTGTGTGACTTTATCGTTGGAGAGTATTGTTACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp GGACAGGGGTTTGAGCGTGTGTGTCTTGTGTCTATGTATGCATGGATGGATTGGAGCTTGGCTCCCATCTaGCACAGTGGCTGGTCCGAT +
Preference number: 4 (lower is better)
Translates to: GQGFERVCLVSMYAWMDWSLAPI*HSGWSD
Trigger: ATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCT...CCAATCCATCCATGCATACATAGACACAAGACACACACGCTCAAACCCCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp AAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTCTTCTGGTGGCCTCAGGTGCAATTCCTTGGTGCATaGCTATTTTCTTCCCCACCA +
Preference number: 4 (lower is better)
Translates to: KCVLLGPRDGSVFWWPQVQFLGA*LFSSPP
Trigger: TGGTGGGGAAGAAAATAGGCATGCACCAAGGAATTG...CACCTGAGGCCACCAGAAGACACTTCCATCCCTCGGGCCCAGCAGTACACACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp ACACTGCTGCCGGGCCATGCTCTGAGTAACAAGGATATAGACAGCCTGTTTACCGACTACTGCACTCCATaGTGCCATTGGCAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: TLLPGHALSNKDIDSLFTDYCTP*CHWQLR
Trigger: CCTCAGCTGCCAATGGCACCATGGAGTGCAGTAGTC...GGTAAACAGGCTGTCTATATCCTTGTTACTCAGAGCATGGCCCGGCAGCAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp GGAAGTGTTGTCTCTGACATGTCCACTGGGAGCTCTGGAAACCAAGTGTGTACTACCTCCGGGTCTCCTTaGTGTCAGAGCAGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: GSVVSDMSTGSSGNQVCTTSGSP*CQSRQH
Trigger: ATGCTGCCTGCTCTGACACCAAGGAGACCCGGAGGT...AGTACACACTTGGTTTCCAGAGCTCCCAGTGGACATGTCAGAGACAACACTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000615459.4
CDS-3UTR CCA 90 bp TACAATTCCTTGGTGCATGCCTATTTTCTTCCCCACCAACCTCTAAGCTCCACATGGCCAGGTTCCTGTTaGCATTCTCCCGCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: YNSLVHAYFLPHQPLSSTWPGSC*HSPAGP
Trigger: AGGGCCGGCGGGAGAATGCCAACAGGAACCTGGCCA...TGTGGAGCTTAGAGGTTGGTGGGGAAGAAAATAGGCATGCACCAAGGAATTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp GATTGGAGTGTGTGTGTATGCTTTGCCCCCGACGTTCCAGTTCAGGAAAGCTTGCCTTGCTCTCCTTCCTaGCCAGGTTCCTGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: DWSVCVCFAPDVPVQESLPCSPS*PGSCWH
Trigger: ATGCCAACAGGAACCTGGCCAGGAAGGAGAGCAAGG...CAAGCTTTCCTGAACTGGAACGTCGGGGGCAAAGCATACACACACACTCCAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp AGGGTAACAATACTCTCCAACGATAAAGTCACACAGCTGGGAGTGCTGAACAGGCCCTGCAGATGTGAGTaGCCCCACTGTCCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: RVTILSNDKVTQLGVLNRPCRCE*PHCPLL
Trigger: CAGCAAGGGACAGTGGGGCCACTCACATCTGCAGGG...CCTGTTCAGCACTCCCAGCTGTGTGACTTTATCGTTGGAGAGTATTGTTACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp CCTACGCACTCCCTTCCCCTGGCAGTGCCACTAGCCCTTCAGTATATAGATTCTGGAAGTGTCTTCTGGTaGCCTCAGGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: PTHSLPLAVPLALQYIDSGSVFW*PQVCVC
Trigger: ACACACACACACCTGAGGCCACCAGAAGACACTTCC...AGAATCTATATACTGAAGGGCTAGTGGCACTGCCAGGGGAAGGGAGTGCGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp GAAGGCTCCCCTCTGCAGTTTGGTCTCAGATGCTGGGAAGTGTTGTCTCTGACAGATGGAAGTGTCTTCTaGTGGCCTCAGGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: EGSPLQFGLRCWEVLSLTDGSVF*WPQVCV
Trigger: CACACACACCTGAGGCCACCAGAAGACACTTCCATC...TGTCAGAGACAACACTTCCCAGCATCTGAGACCAAACTGCAGAGGGGAGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp CCACCGTCAGAGCAGCCCCTAAGTTTTCTTCCTTGTCTGCATGACCCTCTACTGGTCCACTGGGAGCTCTaGAAACCAAGTGTGTACTGC +
Preference number: 4 (lower is better)
Translates to: PPSEQPLSFLPCLHDPLLVHWEL*KPSVYC
Trigger: GCAGTACACACTTGGTTTCCAGAGCTCCCAGTGGAC...CAGTAGAGGGTCATGCAGACAAGGAAGAAAACTTAGGGGCTGCTCTGACGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp TTCTCCAGAAGGCTCCCCTCTGCAGTTTGGTCTCAGATGCTGGGAAGTGTTGTCGTCCACTGGGAGCTCTaGAAACCAAGTGTGTACTGC +
Preference number: 4 (lower is better)
Translates to: FSRRLPSAVWSQMLGSVVVHWEL*KPSVYC
Trigger: GCAGTACACACTTGGTTTCCAGAGCTCCCAGTGGAC...GACAACACTTCCCAGCATCTGAGACCAAACTGCAGAGGGGAGCCTTCTGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp CTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTCTTTGGTCTCAGATGCTaGGAAGTGTTGTCTCTGACA +
Preference number: 4 (lower is better)
Translates to: LGALETKCVLLGPRDGSVFGLRC*EVLSLT
Trigger: TGTCAGAGACAACACTTCCCAGCATCTGAGACCAAA...GACACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp AGGTTTCTTCCCAGGTCACCAGCAGTCCTCAAGCTTGGCTCCCATCTGCCACAGTCTGCCTCTCCCAGATaGAAAGTCCTCCTTTATAGC +
Preference number: 4 (lower is better)
Translates to: RFLPRSPAVLKLGSHLPQSASPR*KVLLYS
Trigger: GCTATAAAGGAGGACTTTCCATCTGGGAGAGGCAGA...CTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCTGGTGACCTGGGAAGAAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp TGGATGGATTGGAGTGTGTGTGTATGCTTTGCCCCCGACGTTCCAGTTCAGGAAGTCCCCAACCATCACTaGAAGCCTACGCACTCCCTT +
Preference number: 4 (lower is better)
Translates to: WMDWSVCVCFAPDVPVQEVPNHH*KPTHSL
Trigger: AAGGGAGTGCGTAGGCTTCCAGTGATGGTTGGGGAC...TTCCTGAACTGGAACGTCGGGGGCAAAGCATACACACACACTCCAATCCATCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp AGGTCACCAGCAGTCCTCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGACCTCGGAATATCATATaGGAGATCTTTTTGTCACGT +
Preference number: 4 (lower is better)
Translates to: RSPAVLKLGSHLPQWLVRPRNII*EIFLSR
Trigger: ACGTGACAAAAAGATCTCTCATATGATATTCCGAGG...TCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCTGGTGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
CDS-3UTR TCA 90 bp ACACTGCTGCCGGGCCATGCTCTGAGTAACAAGGATATAGACAGCCTGTTTACCTGCAGAAGTTATGGCTaGAGCAGGCCTCACAGTGCT +
Preference number: 4 (lower is better)
Translates to: TLLPGHALSNKDIDSLFTCRSYG*SRPHSA
Trigger: AGCACTGTGAGGCCTGCTTCAGCCATAACTTCTGCA...GGTAAACAGGCTGTCTATATCCTTGTTACTCAGAGCATGGCCCGGCAGCAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp GGAAGTGTTGTCTCTGACATGTCCACTGGGAGCTCTGGAAACCAAGTGTGTACTCACAGCTGGGAGTGCTaGACAGGATGGGAAGAAGGT +
Preference number: 4 (lower is better)
Translates to: GSVVSDMSTGSSGNQVCTHSWEC*TGWEEG
Trigger: ACCTTCTTCCCATCCTGTTCAGCACTCCCAGCTGTG...AGTACACACTTGGTTTCCAGAGCTCCCAGTGGACATGTCAGAGACAACACTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp GAGATTCTCATTCCTAACAAGCTGCCCTGTGACAACACTGCTGCCGGGCCATGCTCACCAGGTCTGGAATaGGACCTGAGATTCTCATTC +
Preference number: 4 (lower is better)
Translates to: EILIPNKLPCDNTAAGPCSPGLE*DLRFSF
Trigger: GAATGAGAATCTCAGGTCTCATTCCAGACCTGGTGA...GCATGGCCCGGCAGCAGTGTTGTCACAGGGCAGCTTGTTAGGAATGAGAATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp GAGATTCTCATTCCTAACAAGCTGCCCTGTGACAACACTGCTGCCGGGCCATGCAAGCAGGCCTCACAGTaGTCGATCTTGCATTTGATG +
Preference number: 4 (lower is better)
Translates to: EILIPNKLPCDNTAAGPCKQASQ*SILHLM
Trigger: CATCAAATGCAAGATCGAGCACTGTGAGGCCTGCTT...GCATGGCCCGGCAGCAGTGTTGTCACAGGGCAGCTTGTTAGGAATGAGAATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp GGAAGTGTTGTCTCTGACATGTCCACTGGGAGCTCTGGAAACCAAGTGTGTACTTACTGCACTCCATGGTaGCATTGGCAGCTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: GSVVSDMSTGSSGNQVCTYCTPW*HWQLRS
Trigger: GCTCCTCAGCTGCCAATGGCACCATGGAGTGCAGTA...AGTACACACTTGGTTTCCAGAGCTCCCAGTGGACATGTCAGAGACAACACTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp TATGGTTGTATATGTGGACAGGGGTTTGAGCGTGTGTGTCTTGTGTCTATGTATGGGCATGTAGCACCCTaGGTGTCCGCTCCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: YGCICGQGFERVCLVSMYGHVAP*VSAPRS
Trigger: GCTCCGAGGAGCGGACACGCAGGGTGCTACATGCCC...ATACATAGACACAAGACACACACGCTCAAACCCCTGTCCACATATACAACCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000615459.4
CDS-3UTR GCA 90 bp TACAATTCCTTGGTGCATGCCTATTTTCTTCCCCACCAACCTCTAAGCTCCACAGCACTCTCCTCACTGTaGACCTCCGGGTCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: YNSLVHAYFLPHQPLSSTALSSL*TSGSPW
Trigger: CCAAGGAGACCCGGAGGTGCACAGTGAGGAGAGTGC...TGTGGAGCTTAGAGGTTGGTGGGGAAGAAAATAGGCATGCACCAAGGAATTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356545.7
ENST00000615459.4
CDS-3UTR GCA 90 bp TACAATTCCTTGGTGCATGCCTATTTTCTTCCCCACCAACCTCTAAGCTCCACACCCTTCCTCCTCTTCTaGCCCTCAGGACACGGCACT +
Preference number: 4 (lower is better)
Translates to: YNSLVHAYFLPHQPLSSTPFLLF*PSGHGT
Trigger: AGTGCCGTGTCCTGAGGGGCAGAAGAGGAGGAAGGG...TGTGGAGCTTAGAGGTTGGTGGGGAAGAAAATAGGCATGCACCAAGGAATTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356545.7
ENST00000615459.4
CDS-3UTR GCA 90 bp GCAAGTATGTATGGTTGTATATGTGGACAGGGGTTTGAGCGTGTGTGTCTTGTGCCCTTCCTCCTCTTCTaGCCCTCAGGACACGGCACT +
Preference number: 4 (lower is better)
Translates to: ASMYGCICGQGFERVCLVPFLLF*PSGHGT
Trigger: AGTGCCGTGTCCTGAGGGGCAGAAGAGGAGGAAGGG...CACAAGACACACACGCTCAAACCCCTGTCCACATATACAACCATACATACTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000615459.4
CDS-3UTR GCA 90 bp AGGGTAACAATACTCTCCAACGATAAAGTCACACAGCTGGGAGTGCTGAACAGGTGCTGCTGCTGCTGTTaGTGCCCCTTGCGTCTTCGA +
Preference number: 4 (lower is better)
Translates to: RVTILSNDKVTQLGVLNRCCCCC*CPLRLR
Trigger: TCGAAGACGCAAGGGGCAGCAACAGCAGCAGCAGCA...CCTGTTCAGCACTCCCAGCTGTGTGACTTTATCGTTGGAGAGTATTGTTACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp TCAGGAATCTTAAAATTTAGACTCTGGCTCACCAGGTCTGGAATGAGACCTGAGCCCACTGTCCCTTGCTaGTGCTGCTGTTGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: SGILKFRLWLTRSGMRPEPTVPC*CCCCCP
Trigger: GGGGCAGCAACAGCAGCAGCAGCAAGGGACAGTGGG...CTCAGGTCTCATTCCAGACCTGGTGAGCCAGAGTCTAAATTTTAAGATTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp CCTACGCACTCCCTTCCCCTGGCAGTGCCACTAGCCCTTCAGTATATAGATTCTTGTGTGTGTATGCTTTaGCCCCGACGTTCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: PTHSLPLAVPLALQYIDSCVCML*PRRSSS
Trigger: TGAACTGGAACGTCGGGGGCAAAGCATACACACACA...AGAATCTATATACTGAAGGGCTAGTGGCACTGCCAGGGGAAGGGAGTGCGTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp AGGTCACCAGCAGTCCTCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCTTGTGTCTATGTATaGATGGATGGATTGGAGTGT +
Preference number: 4 (lower is better)
Translates to: RSPAVLKLGSHLPQWLVRSCVYV*MDGLEC
Trigger: ACACTCCAATCCATCCATGCATACATAGACACAAGA...TCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCTGGTGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp GAAGGCTCCCCTCTGCAGTTTGGTCTCAGATGCTGGGAAGTGTTGTCTCTGACATGCAAAGGAATGTGGTaGCTGTGTCTACTGCTGTCG +
Preference number: 4 (lower is better)
Translates to: EGSPLQFGLRCWEVLSLTCKGMW*LCLLLS
Trigger: CGACAGCAGTAGACACAGGCACCACATTCCTTTGCA...TGTCAGAGACAACACTTCCCAGCATCTGAGACCAAACTGCAGAGGGGAGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp CAGTTTGGTCTCAGATGCTGGGAAGTGTTGTCTCTGACATGTCCACTGGGAGCTCAAACCCTCACACCCTaGAAAGGAATGTGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: QFGLRCWEVLSLTCPLGAQTLTP*KGMWCL
Trigger: CAGGCACCACATTCCTTTGCAGGGTGTGAGGGTTTG...AGCTCCCAGTGGACATGTCAGAGACAACACTTCCCAGCATCTGAGACCAAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp GCTTCTCCAGAAGGCTCCCCTCTGCAGTTTGGTCTCAGATGCTGGGAAGTGTTGTCATTCCTAACAAGCTaGCCTGTGACAACACTGCTG +
Preference number: 4 (lower is better)
Translates to: ASPEGSPLQFGLRCWEVLSFLTS*PVTTLL
Trigger: CAGCAGTGTTGTCACAGGGCAGCTTGTTAGGAATGA...CAACACTTCCCAGCATCTGAGACCAAACTGCAGAGGGGAGCCTTCTGGAGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp GCAAGTATGTATGGTTGTATATGTGGACAGGGGTTTGAGCGTGTGTGTCTTGTGGGGACAGAGAGGGTGTaGGGAGCCCAGTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: ASMYGCICGQGFERVCLVGTERV*GAQFSI
Trigger: GATGGAGAACTGGGCTCCCCACACCCTCTCTGTCCC...CACAAGACACACACGCTCAAACCCCTGTCCACATATACAACCATACATACTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
CDS-3UTR CCA 90 bp AGTAACAAGGATATAGACAGCCTGTTTACCACCGTCAGAGCAGCCCCTAAGTTTAGAGCTCACAGCCTTTaGCACAGGCCTGGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: SNKDIDSLFTTVRAAPKFRAHSL*HRPGSP
Trigger: AGGGGAGCCAGGCCTGTGCCAAAGGCTGTGAGCTCT...AAACTTAGGGGCTGCTCTGACGGTGGTAAACAGGCTGTCTATATCCTTGTTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp CCACCGTCAGAGCAGCCCCTAAGTTTTCTTCCTTGTCTGCATGACCCTCTACTGTTGGTGCAGAAGTTATaGCTGAAGCAGGCCTCACAG +
Preference number: 4 (lower is better)
Translates to: PPSEQPLSFLPCLHDPLLLVQKL*LKQASQ
Trigger: CTGTGAGGCCTGCTTCAGCCATAACTTCTGCACCAA...CAGTAGAGGGTCATGCAGACAAGGAAGAAAACTTAGGGGCTGCTCTGACGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp TACAATTCCTTGGTGCATGCCTATTTTCTTCCCCACCAACCTCTAAGCTCCACACCCTGCAGATGTGAGTaGCCCCACTGTCCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: YNSLVHAYFLPHQPLSSTPCRCE*PHCPLL
Trigger: CAGCAAGGGACAGTGGGGCCACTCACATCTGCAGGG...TGTGGAGCTTAGAGGTTGGTGGGGAAGAAAATAGGCATGCACCAAGGAATTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp TGGATGGATTGGAGTGTGTGTGTATGCTTTGCCCCCGACGTTCCAGTTCAGGAACCCTGCAAAGGAATGTaGTGCCTGTGTCTACTGCTG +
Preference number: 4 (lower is better)
Translates to: WMDWSVCVCFAPDVPVQEPCKGM*CLCLLL
Trigger: CAGCAGTAGACACAGGCACCACATTCCTTTGCAGGG...TTCCTGAACTGGAACGTCGGGGGCAAAGCATACACACACACTCCAATCCATCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp GGAAGTGTTGTCTCTGACATGTCCACTGGGAGCTCTGGAAACCAAGTGTGTACTGTCCCCAACCATCACTaGAAGCCTACGCACTCCCTT +
Preference number: 4 (lower is better)
Translates to: GSVVSDMSTGSSGNQVCTVPNHH*KPTHSL
Trigger: AAGGGAGTGCGTAGGCTTCCAGTGATGGTTGGGGAC...AGTACACACTTGGTTTCCAGAGCTCCCAGTGGACATGTCAGAGACAACACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp CATACCTCGCCAAACCCTCACACCCTGCAAAGGAATGTGGTGCCTGTGTCTACTATGAGTCCTTACAGTTaGCAAACACCAGTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: HTSPNPHTLQRNVVPVSTMSPYS*QTPVLA
Trigger: GGCAAGGACTGGTGTTTGTCAACTGTAAGGACTCAT...AGTAGACACAGGCACCACATTCCTTTGCAGGGTGTGAGGGTTTGGCGAGGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401068.1
CDS-3UTR GCA 90 bp TATGGTTGTATATGTGGACAGGGGTTTGAGCGTGTGTGTCTTGTGTCTATGTATATCTCAGCTTCGTGCTaGCAGTCGCGACGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: YGCICGQGFERVCLVSMYISASC*QSRRGQ
Trigger: CTGCCCCCGTCGCGACTGGCAGCACGAAGCTGAGAT...ATACATAGACACAAGACACACACGCTCAAACCCCTGTCCACATATACAACCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp GCAAGTATGTATGGTTGTATATGTGGACAGGGGTTTGAGCGTGTGTGTCTTGTGTGCTGCTGCTGTTGCTaGCCCTTGCGTCTTCGAGAG +
Preference number: 4 (lower is better)
Translates to: ASMYGCICGQGFERVCLVCCCCC*PLRLRE
Trigger: CTCTCGAAGACGCAAGGGGCAGCAACAGCAGCAGCA...CACAAGACACACACGCTCAAACCCCTGTCCACATATACAACCATACATACTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp GATATGTATCCTGGAAGGGTAACAATACTCTCCAACGATAAAGTCACACAGCTGCCCACTGTCCCTTGCTaGTGCTGCTGTTGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: DMYPGRVTILSNDKVTQLPTVPC*CCCCCP
Trigger: GGGGCAGCAACAGCAGCAGCAGCAAGGGACAGTGGG...CAGCTGTGTGACTTTATCGTTGGAGAGTATTGTTACCCTTCCAGGATACATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp GATATGTATCCTGGAAGGGTAACAATACTCTCCAACGATAAAGTCACACAGCTGTCCCTAGGCAGGCCCTaGAGATGTGAGTGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: DMYPGRVTILSNDKVTQLSLGRP*RCEWPH
Trigger: GTGGGGCCACTCACATCTGCAGGGCCTGCCTAGGGA...CAGCTGTGTGACTTTATCGTTGGAGAGTATTGTTACCCTTCCAGGATACATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp AAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTCTTCTGGTGGCCTCAGGTGTCTTGTGTCTATGTATaGATGGATGGATTGGAGTGT +
Preference number: 4 (lower is better)
Translates to: KCVLLGPRDGSVFWWPQVSCVYV*MDGLEC
Trigger: ACACTCCAATCCATCCATGCATACATAGACACAAGA...CACCTGAGGCCACCAGAAGACACTTCCATCCCTCGGGCCCAGCAGTACACACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp CCACTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTTCAGTATATAGATTCTaGCTCTCCCAGATGGAAAGT +
Preference number: 4 (lower is better)
Translates to: PLGALETKCVLLGPRDGSSVYRF*LSQMES
Trigger: ACTTTCCATCTGGGAGAGGCAGAATCTATATACTGA...ACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp CCTTGGCACCATCCTTTTGTAGTTATATATGTGTTTGTACAATTCCTTGGTGCAGCGGATGCCCTACTCTaGCCGGTCGCTCCGGGCTCT +
Preference number: 4 (lower is better)
Translates to: PWHHPFVVIYVFVQFLGAADALL*PVAPGS
Trigger: AGAGCCCGGAGCGACCGGCCAGAGTAGGGCATCCGC...TGCACCAAGGAATTGTACAAACACATATATAACTACAAAAGGATGGTGCCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356545.7
CDS-3UTR CCA 90 bp ACACTGCTGCCGGGCCATGCTCTGAGTAACAAGGATATAGACAGCCTGTTTACCTTGGTGCAGAAGTTATaGCTGAAGCAGGCCTCACAG +
Preference number: 4 (lower is better)
Translates to: TLLPGHALSNKDIDSLFTLVQKL*LKQASQ
Trigger: CTGTGAGGCCTGCTTCAGCCATAACTTCTGCACCAA...GGTAAACAGGCTGTCTATATCCTTGTTACTCAGAGCATGGCCCGGCAGCAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp AGGGTAACAATACTCTCCAACGATAAAGTCACACAGCTGGGAGTGCTGAACAGGGACTACTGCACTCCATaGTGCCATTGGCAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: RVTILSNDKVTQLGVLNRDYCTP*CHWQLR
Trigger: CCTCAGCTGCCAATGGCACCATGGAGTGCAGTAGTC...CCTGTTCAGCACTCCCAGCTGTGTGACTTTATCGTTGGAGAGTATTGTTACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp CTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTCATGTGCAAGTATGTATaGTTGTATATGTGGACAGGG +
Preference number: 4 (lower is better)
Translates to: LGALETKCVLLGPRDGSVMCKYV*LYMWTG
Trigger: CCCTGTCCACATATACAACCATACATACTTGCACAT...GACACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp GGACAGGGGTTTGAGCGTGTGTGTCTTGTGTCTATGTATGCATGGATGGATTGGGATGGAAGTGTCTTCTaGTGGCCTCAGGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: GQGFERVCLVSMYAWMDWDGSVF*WPQVCV
Trigger: CACACACACCTGAGGCCACCAGAAGACACTTCCATC...CCAATCCATCCATGCATACATAGACACAAGACACACACGCTCAAACCCCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp GCAAGTATGTATGGTTGTATATGTGGACAGGGGTTTGAGCGTGTGTGTCTTGTGATCTGCCACAGTGGCTaGTCCGATCCCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: ASMYGCICGQGFERVCLVICHSG*SDPSSF
Trigger: GAAGCTGCTGGGATCGGACCAGCCACTGTGGCAGAT...CACAAGACACACACGCTCAAACCCCTGTCCACATATACAACCATACATACTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp GAGATTCTCATTCCTAACAAGCTGCCCTGTGACAACACTGCTGCCGGGCCATGCACTGAGCAGGCTATTTaGGGTCTCTTGAAATTCCCT +
Preference number: 4 (lower is better)
Translates to: EILIPNKLPCDNTAAGPCTEQAI*GLLKFP
Trigger: AGGGAATTTCAAGAGACCCCAAATAGCCTGCTCAGT...GCATGGCCCGGCAGCAGTGTTGTCACAGGGCAGCTTGTTAGGAATGAGAATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp AGTAACAAGGATATAGACAGCCTGTTTACCACCGTCAGAGCAGCCCCTAAGTTTTCCTCTCCAGCAGGATaGACAGCTTGGGTGAGCACT +
Preference number: 4 (lower is better)
Translates to: SNKDIDSLFTTVRAAPKFSSPAG*TAWVST
Trigger: AGTGCTCACCCAAGCTGTTCATCCTGCTGGAGAGGA...AAACTTAGGGGCTGCTCTGACGGTGGTAAACAGGCTGTCTATATCCTTGTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp ACACTGCTGCCGGGCCATGCTCTGAGTAACAAGGATATAGACAGCCTGTTTACCCAGTTCAGGAAAGCTTaGATCACGCAGAGTAGCACT +
Preference number: 4 (lower is better)
Translates to: TLLPGHALSNKDIDSLFTQFRKA*ITQSST
Trigger: AGTGCTACTCTGCGTGATTCAAGCTTTCCTGAACTG...GGTAAACAGGCTGTCTATATCCTTGTTACTCAGAGCATGGCCCGGCAGCAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp GATTGGAGTGTGTGTGTATGCTTTGCCCCCGACGTTCCAGTTCAGGAAAGCTTGCAGTTCAGGAAAGCTTaGATCACGCAGAGTAGCACT +
Preference number: 4 (lower is better)
Translates to: DWSVCVCFAPDVPVQESLQFRKA*ITQSST
Trigger: AGTGCTACTCTGCGTGATTCAAGCTTTCCTGAACTG...CAAGCTTTCCTGAACTGGAACGTCGGGGGCAAAGCATACACACACACTCCAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp AGTAACAAGGATATAGACAGCCTGTTTACCACCGTCAGAGCAGCCCCTAAGTTTCACAGCTGGGAGTGCTaGACAGGATGGGAAGAAGGT +
Preference number: 4 (lower is better)
Translates to: SNKDIDSLFTTVRAAPKFHSWEC*TGWEEG
Trigger: ACCTTCTTCCCATCCTGTTCAGCACTCCCAGCTGTG...AAACTTAGGGGCTGCTCTGACGGTGGTAAACAGGCTGTCTATATCCTTGTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp CCACTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTACTCGGAATATCATATaGGAGATCTTTTTGTCACGT +
Preference number: 4 (lower is better)
Translates to: PLGALETKCVLLGPRDGSTRNII*EIFLSR
Trigger: ACGTGACAAAAAGATCTCTCATATGATATTCCGAGT...ACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615459.4
CDS-3UTR GCA 90 bp GATATGTATCCTGGAAGGGTAACAATACTCTCCAACGATAAAGTCACACAGCTGACAATCTCAGCTTCGTaGTGCCAGTCGCGACGGGGG +
Preference number: 4 (lower is better)
Translates to: DMYPGRVTILSNDKVTQLTISAS*CQSRRG
Trigger: CCCCCGTCGCGACTGGCAGCACGAAGCTGAGATTGT...CAGCTGTGTGACTTTATCGTTGGAGAGTATTGTTACCCTTCCAGGATACATATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp AGGGTAACAATACTCTCCAACGATAAAGTCACACAGCTGGGAGTGCTGAACAGGATTGCGCAGGACTACTaGACTCCATGGTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: RVTILSNDKVTQLGVLNRIAQDY*TPWCHW
Trigger: CCAATGGCACCATGGAGTGCAGTAGTCCTGCGCAAT...CCTGTTCAGCACTCCCAGCTGTGTGACTTTATCGTTGGAGAGTATTGTTACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000615459.4
CDS-3UTR GCA 90 bp TCAGGAATCTTAAAATTTAGACTCTGGCTCACCAGGTCTGGAATGAGACCTGAGAAACCACAGAGCTGCTaGTTCTTGGAGCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: SGILKFRLWLTRSGMRPEKPQSC*FLEQGP
Trigger: GGGGCCCTGCTCCAAGAAGCAGCAGCTCTGTGGTTT...CTCAGGTCTCATTCCAGACCTGGTGAGCCAGAGTCTAAATTTTAAGATTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000615459.4
CDS-3UTR GCA 90 bp TATGGTTGTATATGTGGACAGGGGTTTGAGCGTGTGTGTCTTGTGTCTATGTATCCCTTCCTCCTCTTCTaGCCCTCAGGACACGGCACT +
Preference number: 4 (lower is better)
Translates to: YGCICGQGFERVCLVSMYPFLLF*PSGHGT
Trigger: AGTGCCGTGTCCTGAGGGGCAGAAGAGGAGGAAGGG...ATACATAGACACAAGACACACACGCTCAAACCCCTGTCCACATATACAACCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000615459.4
CDS-3UTR GCA 90 bp TATGGTTGTATATGTGGACAGGGGTTTGAGCGTGTGTGTCTTGTGTCTATGTATGTCCCTTGCTGCTGCTaGTGTTGCTGCCCCTTGCGT +
Preference number: 4 (lower is better)
Translates to: YGCICGQGFERVCLVSMYVPCCC*CCCPLR
Trigger: ACGCAAGGGGCAGCAACAGCAGCAGCAGCAAGGGAC...ATACATAGACACAAGACACACACGCTCAAACCCCTGTCCACATATACAACCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp GATATGTATCCTGGAAGGGTAACAATACTCTCCAACGATAAAGTCACACAGCTGGTCCCTTGCTGCTGCTaGTGTTGCTGCCCCTTGCGT +
Preference number: 4 (lower is better)
Translates to: DMYPGRVTILSNDKVTQLVPCCC*CCCPLR
Trigger: ACGCAAGGGGCAGCAACAGCAGCAGCAGCAAGGGAC...CAGCTGTGTGACTTTATCGTTGGAGAGTATTGTTACCCTTCCAGGATACATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp AGGTTTCTTCCCAGGTCACCAGCAGTCCTCAAGCTTGGCTCCCATCTGCCACAGTCTTGTGTCTATGTATaGATGGATGGATTGGAGTGT +
Preference number: 4 (lower is better)
Translates to: RFLPRSPAVLKLGSHLPQSCVYV*MDGLEC
Trigger: ACACTCCAATCCATCCATGCATACATAGACACAAGA...CTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCTGGTGACCTGGGAAGAAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp GATTGGAGTGTGTGTGTATGCTTTGCCCCCGACGTTCCAGTTCAGGAAAGCTTGCAGTTTGGTCTCAGATaGTGGGAAGTGTTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: DWSVCVCFAPDVPVQESLQFGLR*WEVLSL
Trigger: CAGAGACAACACTTCCCAGCATCTGAGACCAAACTG...CAAGCTTTCCTGAACTGGAACGTCGGGGGCAAAGCATACACACACACTCCAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp GATTGGAGTGTGTGTGTATGCTTTGCCCCCGACGTTCCAGTTCAGGAAAGCTTGTCATTCCTAACAAGCTaGCCTGTGACAACACTGCTG +
Preference number: 4 (lower is better)
Translates to: DWSVCVCFAPDVPVQESLSFLTS*PVTTLL
Trigger: CAGCAGTGTTGTCACAGGGCAGCTTGTTAGGAATGA...CAAGCTTTCCTGAACTGGAACGTCGGGGGCAAAGCATACACACACACTCCAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp AGGTCACCAGCAGTCCTCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGACAAATTTGGGTAACATaGCAATCATCAGGAATCTTA +
Preference number: 4 (lower is better)
Translates to: RSPAVLKLGSHLPQWLVRQIWVT*QSSGIL
Trigger: TAAGATTCCTGATGATTGGCATGTTACCCAAATTTG...TCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCTGGTGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp GCTTCTCCAGAAGGCTCCCCTCTGCAGTTTGGTCTCAGATGCTGGGAAGTGTTGGCACACACTTCAGAATaGCACAAGGAGTTATTCCAT +
Preference number: 4 (lower is better)
Translates to: ASPEGSPLQFGLRCWEVLAHTSE*HKELFH
Trigger: ATGGAATAACTCCTTGTGGCATTCTGAAGTGTGTGC...CAACACTTCCCAGCATCTGAGACCAAACTGCAGAGGGGAGCCTTCTGGAGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp GCTTCTCCAGAAGGCTCCCCTCTGCAGTTTGGTCTCAGATGCTGGGAAGTGTTGATCTTTATGGTTGATTaGCTCGACACCAAAGCGATC +
Preference number: 4 (lower is better)
Translates to: ASPEGSPLQFGLRCWEVLIFMVD*LDTKAI
Trigger: GATCGCTTTGGTGTCGAGGCAATCAACCATAAAGAT...CAACACTTCCCAGCATCTGAGACCAAACTGCAGAGGGGAGCCTTCTGGAGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401068.1
CDS-3UTR CCA 90 bp GATATGTATCCTGGAAGGGTAACAATACTCTCCAACGATAAAGTCACACAGCTGAGAGCTCACAGCCTTTaGCACAGGCCTGGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: DMYPGRVTILSNDKVTQLRAHSL*HRPGSP
Trigger: AGGGGAGCCAGGCCTGTGCCAAAGGCTGTGAGCTCT...CAGCTGTGTGACTTTATCGTTGGAGAGTATTGTTACCCTTCCAGGATACATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp GGACAGGGGTTTGAGCGTGTGTGTCTTGTGTCTATGTATGCATGGATGGATTGGTTGGTGCAGAAGTTATaGCTGAAGCAGGCCTCACAG +
Preference number: 4 (lower is better)
Translates to: GQGFERVCLVSMYAWMDWLVQKL*LKQASQ
Trigger: CTGTGAGGCCTGCTTCAGCCATAACTTCTGCACCAA...CCAATCCATCCATGCATACATAGACACAAGACACACACGCTCAAACCCCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp CAATCATCAGGAATCTTAAAATTTAGACTCTGGCTCACCAGGTCTGGAATGAGATGGCCAGGTTCCTGTTaGCATTCTCCCGCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: QSSGILKFRLWLTRSGMRWPGSC*HSPAGP
Trigger: AGGGCCGGCGGGAGAATGCCAACAGGAACCTGGCCA...TCTCATTCCAGACCTGGTGAGCCAGAGTCTAAATTTTAAGATTCCTGATGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp CAATCATCAGGAATCTTAAAATTTAGACTCTGGCTCACCAGGTCTGGAATGAGAGCTGGGCCCGAGGGATaGAAGTGTCTTCTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: QSSGILKFRLWLTRSGMRAGPEG*KCLLVA
Trigger: GGCCACCAGAAGACACTTCCATCCCTCGGGCCCAGC...TCTCATTCCAGACCTGGTGAGCCAGAGTCTAAATTTTAAGATTCCTGATGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp GAAGGCTCCCCTCTGCAGTTTGGTCTCAGATGCTGGGAAGTGTTGTCTCTGACAACTGAGCAGGCTATTTaGGGTCTCTTGAAATTCCCT +
Preference number: 4 (lower is better)
Translates to: EGSPLQFGLRCWEVLSLTTEQAI*GLLKFP
Trigger: AGGGAATTTCAAGAGACCCCAAATAGCCTGCTCAGT...TGTCAGAGACAACACTTCCCAGCATCTGAGACCAAACTGCAGAGGGGAGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp CCACTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTTTGTACAATTCCTTaGTGCATGCCTATTTTCTTC +
Preference number: 4 (lower is better)
Translates to: PLGALETKCVLLGPRDGSVCTIP*CMPIFF
Trigger: GAAGAAAATAGGCATGCACCAAGGAATTGTACAAAC...ACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp TCAGGAATCTTAAAATTTAGACTCTGGCTCACCAGGTCTGGAATGAGACCTGAGTGGCCCACTCCCACCTaGATCACCAGGAAACCACAA +
Preference number: 4 (lower is better)
Translates to: SGILKFRLWLTRSGMRPEWPTPT*ITRKPQ
Trigger: TTGTGGTTTCCTGGTGATTCAGGTGGGAGTGGGCCA...CTCAGGTCTCATTCCAGACCTGGTGAGCCAGAGTCTAAATTTTAAGATTCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp GCTTCTCCAGAAGGCTCCCCTCTGCAGTTTGGTCTCAGATGCTGGGAAGTGTTGCCTCGGAATATCATATaGGAGATCTTTTTGTCACGT +
Preference number: 4 (lower is better)
Translates to: ASPEGSPLQFGLRCWEVLPRNII*EIFLSR
Trigger: ACGTGACAAAAAGATCTCTCATATGATATTCCGAGG...CAACACTTCCCAGCATCTGAGACCAAACTGCAGAGGGGAGCCTTCTGGAGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
CDS-3UTR TCA 90 bp AGTAACAAGGATATAGACAGCCTGTTTACCACCGTCAGAGCAGCCCCTAAGTTTTGCATGACCCTCTACTaGGCAGGCTATTTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: SNKDIDSLFTTVRAAPKFCMTLY*AGYLGS
Trigger: AGACCCCAAATAGCCTGCTCAGTAGAGGGTCATGCA...AAACTTAGGGGCTGCTCTGACGGTGGTAAACAGGCTGTCTATATCCTTGTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp GGAAGTGTTGTCTCTGACATGTCCACTGGGAGCTCTGGAAACCAAGTGTGTACTAAGCAGGCCTCACAGTaGTCGATCTTGCATTTGATG +
Preference number: 4 (lower is better)
Translates to: GSVVSDMSTGSSGNQVCTKQASQ*SILHLM
Trigger: CATCAAATGCAAGATCGAGCACTGTGAGGCCTGCTT...AGTACACACTTGGTTTCCAGAGCTCCCAGTGGACATGTCAGAGACAACACTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp CAATCATCAGGAATCTTAAAATTTAGACTCTGGCTCACCAGGTCTGGAATGAGAGCACTCTCCTCACTGTaGACCTCCGGGTCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: QSSGILKFRLWLTRSGMRALSSL*TSGSPW
Trigger: CCAAGGAGACCCGGAGGTGCACAGTGAGGAGAGTGC...TCTCATTCCAGACCTGGTGAGCCAGAGTCTAAATTTTAAGATTCCTGATGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000615459.4
CDS-3UTR GCA 90 bp CAGTTTGGTCTCAGATGCTGGGAAGTGTTGTCTCTGACATGTCCACTGGGAGCTCAATTCCTTGGTGCATaGCTATTTTCTTCCCCACCA +
Preference number: 4 (lower is better)
Translates to: QFGLRCWEVLSLTCPLGAQFLGA*LFSSPP
Trigger: TGGTGGGGAAGAAAATAGGCATGCACCAAGGAATTG...AGCTCCCAGTGGACATGTCAGAGACAACACTTCCCAGCATCTGAGACCAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp CCTACGCACTCCCTTCCCCTGGCAGTGCCACTAGCCCTTCAGTATATAGATTCTGTGTCTATGTATGCATaGATGGATTGGAGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: PTHSLPLAVPLALQYIDSVSMYA*MDWSVC
Trigger: ACACACACTCCAATCCATCCATGCATACATAGACAC...AGAATCTATATACTGAAGGGCTAGTGGCACTGCCAGGGGAAGGGAGTGCGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp GCTTCTCCAGAAGGCTCCCCTCTGCAGTTTGGTCTCAGATGCTGGGAAGTGTTGATGTGCAAGTATGTATaGTTGTATATGTGGACAGGG +
Preference number: 4 (lower is better)
Translates to: ASPEGSPLQFGLRCWEVLMCKYV*LYMWTG
Trigger: CCCTGTCCACATATACAACCATACATACTTGCACAT...CAACACTTCCCAGCATCTGAGACCAAACTGCAGAGGGGAGCCTTCTGGAGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp GCAAGTATGTATGGTTGTATATGTGGACAGGGGTTTGAGCGTGTGTGTCTTGTGGTCCACTGGGAGCTCTaGAAACCAAGTGTGTACTGC +
Preference number: 4 (lower is better)
Translates to: ASMYGCICGQGFERVCLVVHWEL*KPSVYC
Trigger: GCAGTACACACTTGGTTTCCAGAGCTCCCAGTGGAC...CACAAGACACACACGCTCAAACCCCTGTCCACATATACAACCATACATACTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp GATATGTATCCTGGAAGGGTAACAATACTCTCCAACGATAAAGTCACACAGCTGATCTGCCACAGTGGCTaGTCCGATCCCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: DMYPGRVTILSNDKVTQLICHSG*SDPSSF
Trigger: GAAGCTGCTGGGATCGGACCAGCCACTGTGGCAGAT...CAGCTGTGTGACTTTATCGTTGGAGAGTATTGTTACCCTTCCAGGATACATATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp AGGTTTCTTCCCAGGTCACCAGCAGTCCTCAAGCTTGGCTCCCATCTGCCACAGGTTTGTACAATTCCTTaGTGCATGCCTATTTTCTTC +
Preference number: 4 (lower is better)
Translates to: RFLPRSPAVLKLGSHLPQVCTIP*CMPIFF
Trigger: GAAGAAAATAGGCATGCACCAAGGAATTGTACAAAC...CTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCTGGTGACCTGGGAAGAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp GATATGTATCCTGGAAGGGTAACAATACTCTCCAACGATAAAGTCACACAGCTGGATGAACAGCTTGGGTaGGCACTTGAGGCAGCCGTT +
Preference number: 4 (lower is better)
Translates to: DMYPGRVTILSNDKVTQLDEQLG*ALEAAV
Trigger: AACGGCTGCCTCAAGTGCTCACCCAAGCTGTTCATC...CAGCTGTGTGACTTTATCGTTGGAGAGTATTGTTACCCTTCCAGGATACATATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp TATGGTTGTATATGTGGACAGGGGTTTGAGCGTGTGTGTCTTGTGTCTATGTATGGGAAGTGTTGTCTCTaGCATGTCCACTGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: YGCICGQGFERVCLVSMYGKCCL*HVHWEL
Trigger: GAGCTCCCAGTGGACATGTCAGAGACAACACTTCCC...ATACATAGACACAAGACACACACGCTCAAACCCCTGTCCACATATACAACCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp GATATGTATCCTGGAAGGGTAACAATACTCTCCAACGATAAAGTCACACAGCTGCACAGCTGGGAGTGCTaGACAGGATGGGAAGAAGGT +
Preference number: 4 (lower is better)
Translates to: DMYPGRVTILSNDKVTQLHSWEC*TGWEEG
Trigger: ACCTTCTTCCCATCCTGTTCAGCACTCCCAGCTGTG...CAGCTGTGTGACTTTATCGTTGGAGAGTATTGTTACCCTTCCAGGATACATATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp AGGGTAACAATACTCTCCAACGATAAAGTCACACAGCTGGGAGTGCTGAACAGGCAGTTTGGTCTCAGATaGTGGGAAGTGTTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: RVTILSNDKVTQLGVLNRQFGLR*WEVLSL
Trigger: CAGAGACAACACTTCCCAGCATCTGAGACCAAACTG...CCTGTTCAGCACTCCCAGCTGTGTGACTTTATCGTTGGAGAGTATTGTTACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp TTCTCCAGAAGGCTCCCCTCTGCAGTTTGGTCTCAGATGCTGGGAAGTGTTGTCATGTGCAAGTATGTATaGTTGTATATGTGGACAGGG +
Preference number: 4 (lower is better)
Translates to: FSRRLPSAVWSQMLGSVVMCKYV*LYMWTG
Trigger: CCCTGTCCACATATACAACCATACATACTTGCACAT...GACAACACTTCCCAGCATCTGAGACCAAACTGCAGAGGGGAGCCTTCTGGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp TATGGTTGTATATGTGGACAGGGGTTTGAGCGTGTGTGTCTTGTGTCTATGTATAGCAGTCCTCAAGCTTaGCTCCCATCTGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: YGCICGQGFERVCLVSMYSSPQA*LPSATV
Trigger: CACTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCT...ATACATAGACACAAGACACACACGCTCAAACCCCTGTCCACATATACAACCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp GGAAGTGTTGTCTCTGACATGTCCACTGGGAGCTCTGGAAACCAAGTGTGTACTACTGAGCAGGCTATTTaGGGTCTCTTGAAATTCCCT +
Preference number: 4 (lower is better)
Translates to: GSVVSDMSTGSSGNQVCTTEQAI*GLLKFP
Trigger: AGGGAATTTCAAGAGACCCCAAATAGCCTGCTCAGT...AGTACACACTTGGTTTCCAGAGCTCCCAGTGGACATGTCAGAGACAACACTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp GGACAGGGGTTTGAGCGTGTGTGTCTTGTGTCTATGTATGCATGGATGGATTGGACTGAGCAGGCTATTTaGGGTCTCTTGAAATTCCCT +
Preference number: 4 (lower is better)
Translates to: GQGFERVCLVSMYAWMDWTEQAI*GLLKFP
Trigger: AGGGAATTTCAAGAGACCCCAAATAGCCTGCTCAGT...CCAATCCATCCATGCATACATAGACACAAGACACACACGCTCAAACCCCTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp TATGGTTGTATATGTGGACAGGGGTTTGAGCGTGTGTGTCTTGTGTCTATGTATGTCCCCAACCATCACTaGAAGCCTACGCACTCCCTT +
Preference number: 4 (lower is better)
Translates to: YGCICGQGFERVCLVSMYVPNHH*KPTHSL
Trigger: AAGGGAGTGCGTAGGCTTCCAGTGATGGTTGGGGAC...ATACATAGACACAAGACACACACGCTCAAACCCCTGTCCACATATACAACCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp GATTGGAGTGTGTGTGTATGCTTTGCCCCCGACGTTCCAGTTCAGGAAAGCTTGCCTCGGAATATCATATaGGAGATCTTTTTGTCACGT +
Preference number: 4 (lower is better)
Translates to: DWSVCVCFAPDVPVQESLPRNII*EIFLSR
Trigger: ACGTGACAAAAAGATCTCTCATATGATATTCCGAGG...CAAGCTTTCCTGAACTGGAACGTCGGGGGCAAAGCATACACACACACTCCAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
CDS-3UTR TCA 90 bp GATATGTATCCTGGAAGGGTAACAATACTCTCCAACGATAAAGTCACACAGCTGTGCATGACCCTCTACTaGGCAGGCTATTTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: DMYPGRVTILSNDKVTQLCMTLY*AGYLGS
Trigger: AGACCCCAAATAGCCTGCTCAGTAGAGGGTCATGCA...CAGCTGTGTGACTTTATCGTTGGAGAGTATTGTTACCCTTCCAGGATACATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp GCAAGTATGTATGGTTGTATATGTGGACAGGGGTTTGAGCGTGTGTGTCTTGTGTCACCAGGTCTGGAATaGGACCTGAGATTCTCATTC +
Preference number: 4 (lower is better)
Translates to: ASMYGCICGQGFERVCLVSPGLE*DLRFSF
Trigger: GAATGAGAATCTCAGGTCTCATTCCAGACCTGGTGA...CACAAGACACACACGCTCAAACCCCTGTCCACATATACAACCATACATACTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp GCAAGTATGTATGGTTGTATATGTGGACAGGGGTTTGAGCGTGTGTGTCTTGTGAAGCAGGCCTCACAGTaGTCGATCTTGCATTTGATG +
Preference number: 4 (lower is better)
Translates to: ASMYGCICGQGFERVCLVKQASQ*SILHLM
Trigger: CATCAAATGCAAGATCGAGCACTGTGAGGCCTGCTT...CACAAGACACACACGCTCAAACCCCTGTCCACATATACAACCATACATACTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp TATGGTTGTATATGTGGACAGGGGTTTGAGCGTGTGTGTCTTGTGTCTATGTATAAACCAAGTGTGTACTaGTGGGCCCGAGGGATGGAA +
Preference number: 4 (lower is better)
Translates to: YGCICGQGFERVCLVSMYKPSVY*WARGME
Trigger: TTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTT...ATACATAGACACAAGACACACACGCTCAAACCCCTGTCCACATATACAACCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp TATGGTTGTATATGTGGACAGGGGTTTGAGCGTGTGTGTCTTGTGTCTATGTATCAGAAGGCTCCCCTCTaGAGTTTGGTCTCAGATGCT +
Preference number: 4 (lower is better)
Translates to: YGCICGQGFERVCLVSMYQKAPL*SLVSDA
Trigger: AGCATCTGAGACCAAACTGCAGAGGGGAGCCTTCTG...ATACATAGACACAAGACACACACGCTCAAACCCCTGTCCACATATACAACCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp CAATCATCAGGAATCTTAAAATTTAGACTCTGGCTCACCAGGTCTGGAATGAGACCTTGCTCTCCTTCCTaGCCAGGTTCCTGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: QSSGILKFRLWLTRSGMRPCSPS*PGSCWH
Trigger: ATGCCAACAGGAACCTGGCCAGGAAGGAGAGCAAGG...TCTCATTCCAGACCTGGTGAGCCAGAGTCTAAATTTTAAGATTCCTGATGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp GATATGTATCCTGGAAGGGTAACAATACTCTCCAACGATAAAGTCACACAGCTGCTCCCCTCTGCAGTTTaGTCTCAGATGCTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: DMYPGRVTILSNDKVTQLLPSAV*SQMLGS
Trigger: ACTTCCCAGCATCTGAGACCAAACTGCAGAGGGGAG...CAGCTGTGTGACTTTATCGTTGGAGAGTATTGTTACCCTTCCAGGATACATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp TATGGTTGTATATGTGGACAGGGGTTTGAGCGTGTGTGTCTTGTGTCTATGTATCTCCCCTCTGCAGTTTaGTCTCAGATGCTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: YGCICGQGFERVCLVSMYLPSAV*SQMLGS
Trigger: ACTTCCCAGCATCTGAGACCAAACTGCAGAGGGGAG...ATACATAGACACAAGACACACACGCTCAAACCCCTGTCCACATATACAACCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp TATGGTTGTATATGTGGACAGGGGTTTGAGCGTGTGTGTCTTGTGTCTATGTATCCCTGCAAAGGAATGTaGTGCCTGTGTCTACTGCTG +
Preference number: 4 (lower is better)
Translates to: YGCICGQGFERVCLVSMYPCKGM*CLCLLL
Trigger: CAGCAGTAGACACAGGCACCACATTCCTTTGCAGGG...ATACATAGACACAAGACACACACGCTCAAACCCCTGTCCACATATACAACCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp GATATGTATCCTGGAAGGGTAACAATACTCTCCAACGATAAAGTCACACAGCTGCCCTGCAAAGGAATGTaGTGCCTGTGTCTACTGCTG +
Preference number: 4 (lower is better)
Translates to: DMYPGRVTILSNDKVTQLPCKGM*CLCLLL
Trigger: CAGCAGTAGACACAGGCACCACATTCCTTTGCAGGG...CAGCTGTGTGACTTTATCGTTGGAGAGTATTGTTACCCTTCCAGGATACATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp TTTTCTTCCCCACCAACCTCTAAGCTCCACAAGAGCAAGGCCCGTGTTTGGCTCAGCACTTCTCAAATTTaGGTAACATGCCAATCATCA +
Preference number: 4 (lower is better)
Translates to: FSSPPTSKLHKSKARVWLSTSQI*VTCQSS
Trigger: TGATGATTGGCATGTTACCCAAATTTGAGAAGTGCT...GAGCCAAACACGGGCCTTGCTCTTGTGGAGCTTAGAGGTTGGTGGGGAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp CAATCATCAGGAATCTTAAAATTTAGACTCTGGCTCACCAGGTCTGGAATGAGATGCATGACCCTCTACTaGGCAGGCTATTTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: QSSGILKFRLWLTRSGMRCMTLY*AGYLGS
Trigger: AGACCCCAAATAGCCTGCTCAGTAGAGGGTCATGCA...TCTCATTCCAGACCTGGTGAGCCAGAGTCTAAATTTTAAGATTCCTGATGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp TCAGGAATCTTAAAATTTAGACTCTGGCTCACCAGGTCTGGAATGAGACCTGAGTCACCAGGTCTGGAATaGGACCTGAGATTCTCATTC +
Preference number: 4 (lower is better)
Translates to: SGILKFRLWLTRSGMRPESPGLE*DLRFSF
Trigger: GAATGAGAATCTCAGGTCTCATTCCAGACCTGGTGA...CTCAGGTCTCATTCCAGACCTGGTGAGCCAGAGTCTAAATTTTAAGATTCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp CAATCATCAGGAATCTTAAAATTTAGACTCTGGCTCACCAGGTCTGGAATGAGAGTCCTCCTTTATAGCTaGCCAGAATCCCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: QSSGILKFRLWLTRSGMRVLLYS*PESLLL
Trigger: CAGCAGGAGGGATTCTGGTCAGCTATAAAGGAGGAC...TCTCATTCCAGACCTGGTGAGCCAGAGTCTAAATTTTAAGATTCCTGATGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp GGAAGTGTTGTCTCTGACATGTCCACTGGGAGCTCTGGAAACCAAGTGTGTACTATTTATCTTTATGGTTaGTTGCCTCGACACCAAAGC +
Preference number: 4 (lower is better)
Translates to: GSVVSDMSTGSSGNQVCTIYLYG*LPRHQS
Trigger: GCTTTGGTGTCGAGGCAATCAACCATAAAGATAAAT...AGTACACACTTGGTTTCCAGAGCTCCCAGTGGACATGTCAGAGACAACACTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401068.1
CDS-3UTR GCA 90 bp TCAGGAATCTTAAAATTTAGACTCTGGCTCACCAGGTCTGGAATGAGACCTGAGAAGCAGGCCTCACAGTaGTCGATCTTGCATTTGATG +
Preference number: 4 (lower is better)
Translates to: SGILKFRLWLTRSGMRPEKQASQ*SILHLM
Trigger: CATCAAATGCAAGATCGAGCACTGTGAGGCCTGCTT...CTCAGGTCTCATTCCAGACCTGGTGAGCCAGAGTCTAAATTTTAAGATTCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp TATGGTTGTATATGTGGACAGGGGTTTGAGCGTGTGTGTCTTGTGTCTATGTATTGTGTGTGTATGCTTTaGCCCCGACGTTCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: YGCICGQGFERVCLVSMYCVCML*PRRSSS
Trigger: TGAACTGGAACGTCGGGGGCAAAGCATACACACACA...ATACATAGACACAAGACACACACGCTCAAACCCCTGTCCACATATACAACCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp GATATGTATCCTGGAAGGGTAACAATACTCTCCAACGATAAAGTCACACAGCTGTGTGTGTGTATGCTTTaGCCCCGACGTTCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: DMYPGRVTILSNDKVTQLCVCML*PRRSSS
Trigger: TGAACTGGAACGTCGGGGGCAAAGCATACACACACA...CAGCTGTGTGACTTTATCGTTGGAGAGTATTGTTACCCTTCCAGGATACATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp TATGGTTGTATATGTGGACAGGGGTTTGAGCGTGTGTGTCTTGTGTCTATGTATTGCAAAGGAATGTGGTaGCTGTGTCTACTGCTGTCG +
Preference number: 4 (lower is better)
Translates to: YGCICGQGFERVCLVSMYCKGMW*LCLLLS
Trigger: CGACAGCAGTAGACACAGGCACCACATTCCTTTGCA...ATACATAGACACAAGACACACACGCTCAAACCCCTGTCCACATATACAACCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp CATACCTCGCCAAACCCTCACACCCTGCAAAGGAATGTGGTGCCTGTGTCTACTCAAATTTGGGTAACATaGCAATCATCAGGAATCTTA +
Preference number: 4 (lower is better)
Translates to: HTSPNPHTLQRNVVPVSTQIWVT*QSSGIL
Trigger: TAAGATTCCTGATGATTGGCATGTTACCCAAATTTG...AGTAGACACAGGCACCACATTCCTTTGCAGGGTGTGAGGGTTTGGCGAGGTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp CCTTGGCACCATCCTTTTGTAGTTATATATGTGTTTGTACAATTCCTTGGTGCAAGCAGTCCTCAAGCTTaGCTCCCATCTGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: PWHHPFVVIYVFVQFLGASSPQA*LPSATV
Trigger: CACTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCT...TGCACCAAGGAATTGTACAAACACATATATAACTACAAAAGGATGGTGCCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp TCAGGAATCTTAAAATTTAGACTCTGGCTCACCAGGTCTGGAATGAGACCTGAGTCTGCCTCTCCCAGATaGAAAGTCCTCCTTTATAGC +
Preference number: 4 (lower is better)
Translates to: SGILKFRLWLTRSGMRPESASPR*KVLLYS
Trigger: GCTATAAAGGAGGACTTTCCATCTGGGAGAGGCAGA...CTCAGGTCTCATTCCAGACCTGGTGAGCCAGAGTCTAAATTTTAAGATTCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp GATTGGAGTGTGTGTGTATGCTTTGCCCCCGACGTTCCAGTTCAGGAAAGCTTGGTTTGTACAATTCCTTaGTGCATGCCTATTTTCTTC +
Preference number: 4 (lower is better)
Translates to: DWSVCVCFAPDVPVQESLVCTIP*CMPIFF
Trigger: GAAGAAAATAGGCATGCACCAAGGAATTGTACAAAC...CAAGCTTTCCTGAACTGGAACGTCGGGGGCAAAGCATACACACACACTCCAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
3UTR CAA 72 bp GTTGTATATGTGGACAGGGGTTTGAGCGTGTGTGTCTaGTGTCTATGTATGCATGGATGGATTGGAGTGTGT +
Preference number: 4 (lower is better)
Translates to: VVYVDRGLSVCV*CLCMHGWIGVC
Trigger: ACACACTCCAATCCATCCATGCATACATAGACACAAGACACACACGCTCAAACCCCTGTCCACATATACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp CCTTGGCACCATCCTTTTGTAGTTATATATGTGTTTGTACAATTCCTTGGTGCATCTTCCTTGTCTGCATaGCCCTCTACTGAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: PWHHPFVVIYVFVQFLGASSLSA*PSTEQA
Trigger: AGCCTGCTCAGTAGAGGGTCATGCAGACAAGGAAGA...TGCACCAAGGAATTGTACAAACACATATATAACTACAAAAGGATGGTGCCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp CCTTGGCACCATCCTTTTGTAGTTATATATGTGTTTGTACAATTCCTTGGTGCAGTCCTCCTTTATAGCTaGCCAGAATCCCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: PWHHPFVVIYVFVQFLGAVLLYS*PESLLL
Trigger: CAGCAGGAGGGATTCTGGTCAGCTATAAAGGAGGAC...TGCACCAAGGAATTGTACAAACACATATATAACTACAAAAGGATGGTGCCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp CAATCATCAGGAATCTTAAAATTTAGACTCTGGCTCACCAGGTCTGGAATGAGAAGTTATTCCATCCACTaGCCTGCCTTTGGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: QSSGILKFRLWLTRSGMRSYSIH*PAFGQD
Trigger: ATCCTGCCCAAAGGCAGGGCAGTGGATGGAATAACT...TCTCATTCCAGACCTGGTGAGCCAGAGTCTAAATTTTAAGATTCCTGATGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp TCAGGAATCTTAAAATTTAGACTCTGGCTCACCAGGTCTGGAATGAGACCTGAGTTTGGTCTCAGATGCTaGGAAGTGTTGTCTCTGACA +
Preference number: 4 (lower is better)
Translates to: SGILKFRLWLTRSGMRPEFGLRC*EVLSLT
Trigger: TGTCAGAGACAACACTTCCCAGCATCTGAGACCAAA...CTCAGGTCTCATTCCAGACCTGGTGAGCCAGAGTCTAAATTTTAAGATTCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp GGACAGGGGTTTGAGCGTGTGTGTCTTGTGTCTATGTATGCATGGATGGATTGGAGCACTTCTCAAATTTaGGTAACATGCCAATCATCA +
Preference number: 4 (lower is better)
Translates to: GQGFERVCLVSMYAWMDWSTSQI*VTCQSS
Trigger: TGATGATTGGCATGTTACCCAAATTTGAGAAGTGCT...CCAATCCATCCATGCATACATAGACACAAGACACACACGCTCAAACCCCTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
3UTR CAA 72 bp GTGCAAGTATGTATGGTTGTATATGTGGACAGGGGTTaGAGCGTGTGTGTCTTGTGTCTATGTATGCATGGA +
Preference number: 4 (lower is better)
Translates to: VQVCMVVYVDRG*SVCVLCLCMHG
Trigger: TCCATGCATACATAGACACAAGACACACACGCTCAAACCCCTGTCCACATATACAACCATACATACTTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp TACAATTCCTTGGTGCATGCCTATTTTCTTCCCCACCAACCTCTAAGCTCCACATCAGTATATAGATTCTaGCTCTCCCAGATGGAAAGT +
Preference number: 4 (lower is better)
Translates to: YNSLVHAYFLPHQPLSSTSVYRF*LSQMES
Trigger: ACTTTCCATCTGGGAGAGGCAGAATCTATATACTGA...TGTGGAGCTTAGAGGTTGGTGGGGAAGAAAATAGGCATGCACCAAGGAATTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp GATATGTATCCTGGAAGGGTAACAATACTCTCCAACGATAAAGTCACACAGCTGCAATTCCTTGGTGCATaGCTATTTTCTTCCCCACCA +
Preference number: 4 (lower is better)
Translates to: DMYPGRVTILSNDKVTQLQFLGA*LFSSPP
Trigger: TGGTGGGGAAGAAAATAGGCATGCACCAAGGAATTG...CAGCTGTGTGACTTTATCGTTGGAGAGTATTGTTACCCTTCCAGGATACATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp GATATGTATCCTGGAAGGGTAACAATACTCTCCAACGATAAAGTCACACAGCTGTTTGGTCTCAGATGCTaGGAAGTGTTGTCTCTGACA +
Preference number: 4 (lower is better)
Translates to: DMYPGRVTILSNDKVTQLFGLRC*EVLSLT
Trigger: TGTCAGAGACAACACTTCCCAGCATCTGAGACCAAA...CAGCTGTGTGACTTTATCGTTGGAGAGTATTGTTACCCTTCCAGGATACATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp AGGGTAACAATACTCTCCAACGATAAAGTCACACAGCTGGGAGTGCTGAACAGGAGCACTTCTCAAATTTaGGTAACATGCCAATCATCA +
Preference number: 4 (lower is better)
Translates to: RVTILSNDKVTQLGVLNRSTSQI*VTCQSS
Trigger: TGATGATTGGCATGTTACCCAAATTTGAGAAGTGCT...CCTGTTCAGCACTCCCAGCTGTGTGACTTTATCGTTGGAGAGTATTGTTACCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR TCA 90 bp CCTTGGCACCATCCTTTTGTAGTTATATATGTGTTTGTACAATTCCTTGGTGCACAGTTCAGGAAAGCTTaGATCACGCAGAGTAGCACT +
Preference number: 4 (lower is better)
Translates to: PWHHPFVVIYVFVQFLGAQFRKA*ITQSST
Trigger: AGTGCTACTCTGCGTGATTCAAGCTTTCCTGAACTG...TGCACCAAGGAATTGTACAAACACATATATAACTACAAAAGGATGGTGCCAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp TATGGTTGTATATGTGGACAGGGGTTTGAGCGTGTGTGTCTTGTGTCTATGTATGCACACACTTCAGAATaGCACAAGGAGTTATTCCAT +
Preference number: 4 (lower is better)
Translates to: YGCICGQGFERVCLVSMYAHTSE*HKELFH
Trigger: ATGGAATAACTCCTTGTGGCATTCTGAAGTGTGTGC...ATACATAGACACAAGACACACACGCTCAAACCCCTGTCCACATATACAACCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp TATGGTTGTATATGTGGACAGGGGTTTGAGCGTGTGTGTCTTGTGTCTATGTATGTGTCTATGTATGCATaGATGGATTGGAGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: YGCICGQGFERVCLVSMYVSMYA*MDWSVC
Trigger: ACACACACTCCAATCCATCCATGCATACATAGACAC...ATACATAGACACAAGACACACACGCTCAAACCCCTGTCCACATATACAACCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp CAATCATCAGGAATCTTAAAATTTAGACTCTGGCTCACCAGGTCTGGAATGAGAGCACACACTTCAGAATaGCACAAGGAGTTATTCCAT +
Preference number: 4 (lower is better)
Translates to: QSSGILKFRLWLTRSGMRAHTSE*HKELFH
Trigger: ATGGAATAACTCCTTGTGGCATTCTGAAGTGTGTGC...TCTCATTCCAGACCTGGTGAGCCAGAGTCTAAATTTTAAGATTCCTGATGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp CAATCATCAGGAATCTTAAAATTTAGACTCTGGCTCACCAGGTCTGGAATGAGAGTGTCTATGTATGCATaGATGGATTGGAGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: QSSGILKFRLWLTRSGMRVSMYA*MDWSVC
Trigger: ACACACACTCCAATCCATCCATGCATACATAGACAC...TCTCATTCCAGACCTGGTGAGCCAGAGTCTAAATTTTAAGATTCCTGATGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp TCAGGAATCTTAAAATTTAGACTCTGGCTCACCAGGTCTGGAATGAGACCTGAGTTGCATTTATCTTTATaGTTGATTGCCTCGACACCA +
Preference number: 4 (lower is better)
Translates to: SGILKFRLWLTRSGMRPELHLSL*LIASTP
Trigger: TGGTGTCGAGGCAATCAACCATAAAGATAAATGCAA...CTCAGGTCTCATTCCAGACCTGGTGAGCCAGAGTCTAAATTTTAAGATTCCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401068.1
CDS-3UTR GCA 90 bp TCAGGAATCTTAAAATTTAGACTCTGGCTCACCAGGTCTGGAATGAGACCTGAGCAAATTTGGGTAACATaGCAATCATCAGGAATCTTA +
Preference number: 4 (lower is better)
Translates to: SGILKFRLWLTRSGMRPEQIWVT*QSSGIL
Trigger: TAAGATTCCTGATGATTGGCATGTTACCCAAATTTG...CTCAGGTCTCATTCCAGACCTGGTGAGCCAGAGTCTAAATTTTAAGATTCCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR GCA 90 bp CCTTGGCACCATCCTTTTGTAGTTATATATGTGTTTGTACAATTCCTTGGTGCATCAGTATATAGATTCTaGCTCTCCCAGATGGAAAGT +
Preference number: 4 (lower is better)
Translates to: PWHHPFVVIYVFVQFLGASVYRF*LSQMES
Trigger: ACTTTCCATCTGGGAGAGGCAGAATCTATATACTGA...TGCACCAAGGAATTGTACAAACACATATATAACTACAAAAGGATGGTGCCAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CCA 90 bp CAATCATCAGGAATCTTAAAATTTAGACTCTGGCTCACCAGGTCTGGAATGAGAAGCACTTCTCAAATTTaGGTAACATGCCAATCATCA +
Preference number: 4 (lower is better)
Translates to: QSSGILKFRLWLTRSGMRSTSQI*VTCQSS
Trigger: TGATGATTGGCATGTTACCCAAATTTGAGAAGTGCT...TCTCATTCCAGACCTGGTGAGCCAGAGTCTAAATTTTAAGATTCCTGATGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS GCA 90 bp CCTGGGCGCCCGGCTCGCCTGCGCTCCGCCCGCCCGTTCCCAAGTTaGTCAATCTGCGGACGGCTCACGCCCTCGGGGCCAGCGCCCCAC +
Preference number: 5 (lower is better)
Translates to: PGRPARLRSARPFPS*SICGRLTPSGPAPH
Trigger: GTGGGGCGCTGGCCCCGAGGGCGTGAGCCGTCCGCAGATTGAGCAACTTGGGAACGGGCGGGCGGAGCGCAGGCGAGCCGGGCGCCCAGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356545.7
CDS GCA 90 bp GCACCCGAGCGGATGCCCTACTCTGGCCGGTCGCTCCGGGCTCTCTaGCCTGCGCTGGTGCTCTCCGTCGCGCCTCCGCTCGGCCGGAGC +
Preference number: 5 (lower is better)
Translates to: APERMPYSGRSLRAL*PALVLSVAPPLGRS
Trigger: GCTCCGGCCGAGCGGAGGCGCGACGGAGAGCACCAGCGCAGGGCAGAGAGCCCGGAGCGACCGGCCAGAGTAGGGCATCCGCTCGGGTGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356545.7
CDS GCA 90 bp CCAGCGCCCCACCCGGCGCATCGGTCCTCCGGGGCGGCTCGGAGCTaGCCTCGTTCTCCGCAGCACCCGAGCGGATGCCCTACTCTGGCC +
Preference number: 5 (lower is better)
Translates to: PAPHPAHRSSGAARS*PRSPQHPSGCPTLA
Trigger: GGCCAGAGTAGGGCATCCGCTCGGGTGCTGCGGAGAACGAGGGCAGCTCCGAGCCGCCCCGGAGGACCGATGCGCCGGGTGGGGCGCTGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356545.7
CDS GCA 90 bp CCGGCTCGCCTGCGCTCCGCCCGCCCGTTCCCAAGTTGCTCAATCTaGGGACGGCTCACGCCCTCGGGGCCAGCGCCCCACCCGGCGCAT +
Preference number: 5 (lower is better)
Translates to: PARLRSARPFPSCSI*GRLTPSGPAPHPAH
Trigger: ATGCGCCGGGTGGGGCGCTGGCCCCGAGGGCGTGAGCCGTCCGCAGATTGAGCAACTTGGGAACGGGCGGGCGGAGCGCAGGCGAGCCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356545.7
CDS GCA 90 bp CGCTCACCCGCCCGCTGCGGGACTGTCCTGGGCGCCCGGCTCGCCTaGGCTCCGCCCGCCCGTTCCCAAGTTGCTCAATCTGCGGACGGC +
Preference number: 5 (lower is better)
Translates to: RSPARCGTVLGARLA*APPARSQVAQSADG
Trigger: GCCGTCCGCAGATTGAGCAACTTGGGAACGGGCGGGCGGAGCGCAGGCGAGCCGGGCGCCCAGGACAGTCCCGCAGCGGGCGGGTGAGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356545.7
CDS CCA 90 bp GGATGCCCTACTCTGGCCGGTCGCTCCGGGCTCTCTGCCCTGCGCTaGTGCTCTCCGTCGCGCCTCCGCTCGGCCGGAGCTCCCAGCCCG +
Preference number: 5 (lower is better)
Translates to: GCPTLAGRSGLSALR*CSPSRLRSAGAPSP
Trigger: CGGGCTGGGAGCTCCGGCCGAGCGGAGGCGCGACGGAGAGCACCAGCGCAGGGCAGAGAGCCCGGAGCGACCGGCCAGAGTAGGGCATCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356545.7
CDS GCA 90 bp CGAGCGGATGCCCTACTCTGGCCGGTCGCTCCGGGCTCTCTGCCCTaGGCTGGTGCTCTCCGTCGCGCCTCCGCTCGGCCGGAGCTCCCA +
Preference number: 5 (lower is better)
Translates to: RADALLWPVAPGSLP*AGALRRASARPELP
Trigger: TGGGAGCTCCGGCCGAGCGGAGGCGCGACGGAGAGCACCAGCGCAGGGCAGAGAGCCCGGAGCGACCGGCCAGAGTAGGGCATCCGCTCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356545.7
CDS CCA 90 bp GGAGCTGCCCTCGTTCTCCGCAGCACCCGAGCGGATGCCCTACTCTaGCCGGTCGCTCCGGGCTCTCTGCCCTGCGCTGGTGCTCTCCGT +
Preference number: 5 (lower is better)
Translates to: GAALVLRSTRADALL*PVAPGSLPCAGALR
Trigger: ACGGAGAGCACCAGCGCAGGGCAGAGAGCCCGGAGCGACCGGCCAGAGTAGGGCATCCGCTCGGGTGCTGCGGAGAACGAGGGCAGCTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356545.7
CDS GCA 90 bp GCAGGCCCTGCAGATGTGAGTGGCCCCACTGTCCCTTGCTGCTGCTaGTGTTGCTGCCCCTTGCGTCTTCGAGAGCCAGCACCCGCCTCC +
Preference number: 5 (lower is better)
Translates to: AGPADVSGPTVPCCC*CCCPLRLREPAPAS
Trigger: GGAGGCGGGTGCTGGCTCTCGAAGACGCAAGGGGCAGCAACAGCAGCAGCAGCAAGGGACAGTGGGGCCACTCACATCTGCAGGGCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS CCA 90 bp CCTTGCGTCTTCGAGAGCCAGCACCCGCCTCCTTGCTCTCCTTCCTaGCCAGGTTCCTGTTGGCATTCTCCCGCCGGCCCTGGCCTCCCT +
Preference number: 5 (lower is better)
Translates to: PCVFESQHPPPCSPS*PGSCWHSPAGPGLP
Trigger: AGGGAGGCCAGGGCCGGCGGGAGAATGCCAACAGGAACCTGGCCAGGAAGGAGAGCAAGGAGGCGGGTGCTGGCTCTCGAAGACGCAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS GCA 90 bp GCTGTTGCTGCCCCTTGCGTCTTCGAGAGCCAGCACCCGCCTCCTTaGTCTCCTTCCTGGCCAGGTTCCTGTTGGCATTCTCCCGCCGGC +
Preference number: 5 (lower is better)
Translates to: AVAAPCVFESQHPPP*SPSWPGSCWHSPAG
Trigger: GCCGGCGGGAGAATGCCAACAGGAACCTGGCCAGGAAGGAGAGCAAGGAGGCGGGTGCTGGCTCTCGAAGACGCAAGGGGCAGCAACAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS GCA 90 bp CTGCGTGTCCGCTCCTCGGAGCCCCTCCGGAAACCACAGAGCTGCTaGTTCTTGGAGCAGGGCCCCCACGGAGACCACTCGCTCATTTCA +
Preference number: 5 (lower is better)
Translates to: LRVRSSEPLRKPQSC*FLEQGPHGDHSLIS
Trigger: TGAAATGAGCGAGTGGTCTCCGTGGGGGCCCTGCTCCAAGAAGCAGCAGCTCTGTGGTTTCCGGAGGGGCTCCGAGGAGCGGACACGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000615459.4
CDS GCA 90 bp CCTTCCTCCTCTTCTGCCCCTCAGGACACGGCACTCTCCTCACTGTaGACCTCCGGGTCTCCTTGGTGTCAGAGCAGGCAGCATGGTCCC +
Preference number: 5 (lower is better)
Translates to: PSSSSAPQDTALSSL*TSGSPWCQSRQHGP
Trigger: GGGACCATGCTGCCTGCTCTGACACCAAGGAGACCCGGAGGTGCACAGTGAGGAGAGTGCCGTGTCCTGAGGGGCAGAAGAGGAGGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000615459.4
CDS CCA 90 bp TCCGCTCCTCGGAGCCCCTCCGGAAACCACAGAGCTGCTGCTTCTTaGAGCAGGGCCCCCACGGAGACCACTCGCTCATTTCACATTGCG +
Preference number: 5 (lower is better)
Translates to: SAPRSPSGNHRAAAS*SRAPTETTRSFHIA
Trigger: CGCAATGTGAAATGAGCGAGTGGTCTCCGTGGGGGCCCTGCTCCAAGAAGCAGCAGCTCTGTGGTTTCCGGAGGGGCTCCGAGGAGCGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000615459.4
CDS-3UTR CAA 90 bp AAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTCTTCTGGTGGCCTCAGGTGCTGGCCAGGTTCCTGTaGGCATTCTCCCGCCGGCCC +
Preference number: 5 (lower is better)
Translates to: KCVLLGPRDGSVFWWPQVLARFL*AFSRRP
Trigger: GGGCCGGCGGGAGAATGCCAACAGGAACCTGGCCAG...CACCTGAGGCCACCAGAAGACACTTCCATCCCTCGGGCCCAGCAGTACACACTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp CTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTCCTGGCCAGGTTCCTGTaGGCATTCTCCCGCCGGCCC +
Preference number: 5 (lower is better)
Translates to: LGALETKCVLLGPRDGSVLARFL*AFSRRP
Trigger: GGGCCGGCGGGAGAATGCCAACAGGAACCTGGCCAG...GACACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS TCA 90 bp CCTCTTCTGCCCAGGACTACTGCACTCCATGGTGCCATTGGCAGCTaGGGAGCCCTCGGGACAAGCTGGATAGCAGCGGCCCTTGTGCAG +
Preference number: 5 (lower is better)
Translates to: PLLPRTTALHGAIGS*GALGTSWIAAALVQ
Trigger: CTGCACAAGGGCCGCTGCTATCCAGCTTGTCCCGAGGGCTCCTCAGCTGCCAATGGCACCATGGAGTGCAGTAGTCCTGGGCAGAAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612451.4
CDS CCA 90 bp GCGTCGAAGTATCCAGGTGGGCAGGACGGCAAGCAGACGCCCACCTaGCGGATGTCGTTCCTCTCCAGCAGGATGAACAGCTTGGGTGAG +
Preference number: 5 (lower is better)
Translates to: ASKYPGGQDGKQTPT*RMSFLSSRMNSLGE
Trigger: CTCACCCAAGCTGTTCATCCTGCTGGAGAGGAACGACATCCGCCAGGTGGGCGTCTGCTTGCCGTCCTGCCCACCTGGATACTTCGACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS CCA 90 bp GATGCACTTGTTCATGTCGGGGTTGCGGGCGTCGAAGTATCCAGGTaGGCAGGACGGCAAGCAGACGCCCACCTGGCGGATGTCGTTCCT +
Preference number: 5 (lower is better)
Translates to: DALVHVGVAGVEVSR*AGRQADAHLADVVP
Trigger: AGGAACGACATCCGCCAGGTGGGCGTCTGCTTGCCGTCCTGCCCACCTGGATACTTCGACGCCCGCAACCCCGACATGAACAAGTGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS CCA 90 bp CCTTCCTCCTCTTCTGCCCAGGACTACTGCACTCCATGGTGCCATTaGCAGCTGAGGAGCCCTCGGGACAAGCTGGATAGCAGCGGCCCT +
Preference number: 5 (lower is better)
Translates to: PSSSSAQDYCTPWCH*QLRSPRDKLDSSGP
Trigger: AGGGCCGCTGCTATCCAGCTTGTCCCGAGGGCTCCTCAGCTGCCAATGGCACCATGGAGTGCAGTAGTCCTGGGCAGAAGAGGAGGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612451.4
CDS-3UTR CAA 90 bp CCACTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTCACTCCATGGTGCCATaGGCAGCTGAGGAGCCCTCG +
Preference number: 5 (lower is better)
Translates to: PLGALETKCVLLGPRDGSHSMVP*AAEEPS
Trigger: CGAGGGCTCCTCAGCTGCCAATGGCACCATGGAGTG...ACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS TCA 90 bp TTCACATTGCGCAGGACTACTGCACTCCATGGTGCCATTGGCAGCTaGGGAGCCCTCGGGACAAGCTGGATAGCAGCGGCCCTTGTGCAG +
Preference number: 5 (lower is better)
Translates to: FTLRRTTALHGAIGS*GALGTSWIAAALVQ
Trigger: CTGCACAAGGGCCGCTGCTATCCAGCTTGTCCCGAGGGCTCCTCAGCTGCCAATGGCACCATGGAGTGCAGTAGTCCTGCGCAATGTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000615459.4
CDS CCA 90 bp CGCTCATTTCACATTGCGCAGGACTACTGCACTCCATGGTGCCATTaGCAGCTGAGGAGCCCTCGGGACAAGCTGGATAGCAGCGGCCCT +
Preference number: 5 (lower is better)
Translates to: RSFHIAQDYCTPWCH*QLRSPRDKLDSSGP
Trigger: AGGGCCGCTGCTATCCAGCTTGTCCCGAGGGCTCCTCAGCTGCCAATGGCACCATGGAGTGCAGTAGTCCTGCGCAATGTGAAATGAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000615459.4
CDS-3UTR CAA 90 bp AGGTCACCAGCAGTCCTCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGAGATAGCACACGGCTCTaGCTAACACCTCTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: RSPAVLKLGSHLPQWLVRDSTRL*LTPLGL
Trigger: CAGCCCCAGAGGTGTTAGCAAGAGCCGTGTGCTATC...TCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCTGGTGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
CDS-3UTR CAA 90 bp TGTCCACTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGATGCTGTTGCTGCCCCTaGCGTCTTCGAGAGCCAGCA +
Preference number: 5 (lower is better)
Translates to: CPLGALETKCVLLGPRDGCCCCP*RLREPA
Trigger: TGCTGGCTCTCGAAGACGCAAGGGGCAGCAACAGCA...TCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAGTGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp TTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTCTCCAGAAGGCAGCAGTCCTCAAGCTaGGCTCCCATCTGCCACAGT +
Preference number: 5 (lower is better)
Translates to: LAPICHSGWSDPSSFSRRQQSSS*APICHS
Trigger: ACTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCTG...CCTTCTGGAGAAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS TCA 90 bp CCAACCCAGTCCTTGCCAGCGGTGATCTTCTGGCCCACTCCCACCTaGATCACCAGGAAACCACAATCTCAGCTTCGTGCTGCCAGTCGC +
Preference number: 5 (lower is better)
Translates to: PTQSLPAVIFWPTPT*ITRKPQSQLRAASR
Trigger: GCGACTGGCAGCACGAAGCTGAGATTGTGGTTTCCTGGTGATTCAGGTGGGAGTGGGCCAGAAGATCACCGCTGGCAAGGACTGGGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp AGGTCACCAGCAGTCCTCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGACACTTGAGGCAGCCGTaGACTTCAGAGCAGAGCTCA +
Preference number: 5 (lower is better)
Translates to: RSPAVLKLGSHLPQWLVRHLRQP*TSEQSS
Trigger: TGAGCTCTGCTCTGAAGTCAACGGCTGCCTCAAGTG...TCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCTGGTGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp GTCCTCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTAGCTTGGGTGAGCACTaGAGGCAGCCGTTGACTTCA +
Preference number: 5 (lower is better)
Translates to: VLKLGSHLPQWLVRSQQLSLGEH*RQPLTS
Trigger: TGAAGTCAACGGCTGCCTCAAGTGCTCACCCAAGCT...AAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp CCTCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTCTTTGTTCATGTCGGGGTaGCGGGCGTCGAAGTATCCA +
Preference number: 5 (lower is better)
Translates to: PQAWLPSATVAGPIPAASLFMSG*RASKYP
Trigger: TGGATACTTCGACGCCCGCAACCCCGACATGAACAA...AGAAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp TGGATGGATTGGAGTGTGTGTGTATGCTTTGCCCCCGACGTTCCAGTTCAGGAACTGGCCAGGTTCCTGTaGGCATTCTCCCGCCGGCCC +
Preference number: 5 (lower is better)
Translates to: WMDWSVCVCFAPDVPVQELARFL*AFSRRP
Trigger: GGGCCGGCGGGAGAATGCCAACAGGAACCTGGCCAG...TTCCTGAACTGGAACGTCGGGGGCAAAGCATACACACACACTCCAATCCATCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp TGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTCTTGCTGTTGCTGCCCCTaGCGTCTTCGAGAGCCAGCA +
Preference number: 5 (lower is better)
Translates to: WELWKPSVYCWARGMEVSCCCCP*RLREPA
Trigger: TGCTGGCTCTCGAAGACGCAAGGGGCAGCAACAGCA...AGACACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp AAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTCTTCTGGTGGCCTCAGGTGCAGCAGTCCTCAAGCTaGGCTCCCATCTGCCACAGT +
Preference number: 5 (lower is better)
Translates to: KCVLLGPRDGSVFWWPQVQQSSS*APICHS
Trigger: ACTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCTG...CACCTGAGGCCACCAGAAGACACTTCCATCCCTCGGGCCCAGCAGTACACACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp CTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTCCAGCAGTCCTCAAGCTaGGCTCCCATCTGCCACAGT +
Preference number: 5 (lower is better)
Translates to: LGALETKCVLLGPRDGSVQQSSS*APICHS
Trigger: ACTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCTG...GACACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp TTCTCCAGAAGGCTCCCCTCTGCAGTTTGGTCTCAGATGCTGGGAAGTGTTGTCCCGCCCGTTCCCAAGTaGCTCAATCTGCGGACGGCT +
Preference number: 5 (lower is better)
Translates to: FSRRLPSAVWSQMLGSVVPPVPK*LNLRTA
Trigger: AGCCGTCCGCAGATTGAGCAACTTGGGAACGGGCGG...GACAACACTTCCCAGCATCTGAGACCAAACTGCAGAGGGGAGCCTTCTGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356545.7
CDS-3UTR CAA 90 bp ACCAGAATCCCTCCTGCTGCAAGATGGCCGGGGCCCTTTCTCCCGTCCTTTAAGAAACCAACCCAGTCCTaGCCAGCGGTGATCTTCTGG +
Preference number: 5 (lower is better)
Translates to: TRIPPAARWPGPFLPSFKKPTQS*PAVIFW
Trigger: CCAGAAGATCACCGCTGGCAAGGACTGGGTTGGTTT...CTTAAAGGACGGGAGAAAGGGCCCCGGCCATCTTGCAGCAGGAGGGATTCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp ACCAGAATCCCTCCTGCTGCAAGATGGCCGGGGCCCTTTCTCCCGTCCTTTAAGAGCTTGGGTGAGCACTaGAGGCAGCCGTTGACTTCA +
Preference number: 5 (lower is better)
Translates to: TRIPPAARWPGPFLPSFKSLGEH*RQPLTS
Trigger: TGAAGTCAACGGCTGCCTCAAGTGCTCACCCAAGCT...CTTAAAGGACGGGAGAAAGGGCCCCGGCCATCTTGCAGCAGGAGGGATTCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp CTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTCAGCAGGATGAACAGCTaGGGTGAGCACTTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: LGALETKCVLLGPRDGSVSRMNS*GEHLRQ
Trigger: CTGCCTCAAGTGCTCACCCAAGCTGTTCATCCTGCT...GACACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp CCACTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTTTGTTCATGTCGGGGTaGCGGGCGTCGAAGTATCCA +
Preference number: 5 (lower is better)
Translates to: PLGALETKCVLLGPRDGSLFMSG*RASKYP
Trigger: TGGATACTTCGACGCCCGCAACCCCGACATGAACAA...ACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp CATACCTCGCCAAACCCTCACACCCTGCAAAGGAATGTGGTGCCTGTGTCTACTCACTCCATGGTGCCATaGGCAGCTGAGGAGCCCTCG +
Preference number: 5 (lower is better)
Translates to: HTSPNPHTLQRNVVPVSTHSMVP*AAEEPS
Trigger: CGAGGGCTCCTCAGCTGCCAATGGCACCATGGAGTG...AGTAGACACAGGCACCACATTCCTTTGCAGGGTGTGAGGGTTTGGCGAGGTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp CCTACGCACTCCCTTCCCCTGGCAGTGCCACTAGCCCTTCAGTATATAGATTCTCACTCCATGGTGCCATaGGCAGCTGAGGAGCCCTCG +
Preference number: 5 (lower is better)
Translates to: PTHSLPLAVPLALQYIDSHSMVP*AAEEPS
Trigger: CGAGGGCTCCTCAGCTGCCAATGGCACCATGGAGTG...AGAATCTATATACTGAAGGGCTAGTGGCACTGCCAGGGGAAGGGAGTGCGTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp TCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTCTCCCTCGCTCATTTCACATaGCGCAGGACTACTGCACTC +
Preference number: 5 (lower is better)
Translates to: SSLAPICHSGWSDPSSFSLAHFT*RRTTAL
Trigger: GAGTGCAGTAGTCCTGCGCAATGTGAAATGAGCGAG...GGAGAAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000615459.4
CDS-3UTR CAA 90 bp GGACAGGGGTTTGAGCGTGTGTGTCTTGTGTCTATGTATGCATGGATGGATTGGCTGGCCAGGTTCCTGTaGGCATTCTCCCGCCGGCCC +
Preference number: 5 (lower is better)
Translates to: GQGFERVCLVSMYAWMDWLARFL*AFSRRP
Trigger: GGGCCGGCGGGAGAATGCCAACAGGAACCTGGCCAG...CCAATCCATCCATGCATACATAGACACAAGACACACACGCTCAAACCCCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp TGTCCACTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGATGCCTTTGGGCAGGATaGTCCCCAACCATCACTGGA +
Preference number: 5 (lower is better)
Translates to: CPLGALETKCVLLGPRDGCLWAG*SPTITG
Trigger: TCCAGTGATGGTTGGGGACAATCCTGCCCAAAGGCA...TCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAGTGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS TCA 90 bp AAACACCAGTCCTTGCCAGCGGTGATCTTCTGGCCCACTCCCACCTaGATCACCAGGAAACCACAATCTCAGCTTCGTGCTGCCAGTCGC +
Preference number: 5 (lower is better)
Translates to: KHQSLPAVIFWPTPT*ITRKPQSQLRAASR
Trigger: GCGACTGGCAGCACGAAGCTGAGATTGTGGTTTCCTGGTGATTCAGGTGGGAGTGGGCCAGAAGATCACCGCTGGCAAGGACTGGTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401068.1
CDS-3UTR CAA 90 bp TGCCTTTGGGCAGGATTGTCCCCAACCATCACTGGAAGCCTACGCACTCCCTTCAAACCAACCCAGTCCTaGCCAGCGGTGATCTTCTGG +
Preference number: 5 (lower is better)
Translates to: CLWAGLSPTITGSLRTPFKPTQS*PAVIFW
Trigger: CCAGAAGATCACCGCTGGCAAGGACTGGGTTGGTTT...GAAGGGAGTGCGTAGGCTTCCAGTGATGGTTGGGGACAATCCTGCCCAAAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp CCTCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTCTAAGCCCTCCTTACACTaGGTGCAGAAGTTATGGCTG +
Preference number: 5 (lower is better)
Translates to: PQAWLPSATVAGPIPAASKPSLH*VQKLWL
Trigger: CAGCCATAACTTCTGCACCAAGTGTAAGGAGGGCTT...AGAAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp GAGATTCTCATTCCTAACAAGCTGCCCTGTGACAACACTGCTGCCGGGCCATGCCAGCAGTCCTCAAGCTaGGCTCCCATCTGCCACAGT +
Preference number: 5 (lower is better)
Translates to: EILIPNKLPCDNTAAGPCQQSSS*APICHS
Trigger: ACTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCTG...GCATGGCCCGGCAGCAGTGTTGTCACAGGGCAGCTTGTTAGGAATGAGAATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp GAGATTCTCATTCCTAACAAGCTGCCCTGTGACAACACTGCTGCCGGGCCATGCGTGTGTGTGTATGCTTaGCCCCCGACGTTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: EILIPNKLPCDNTAAGPCVCVYA*PPTFQF
Trigger: GAACTGGAACGTCGGGGGCAAAGCATACACACACAC...GCATGGCCCGGCAGCAGTGTTGTCACAGGGCAGCTTGTTAGGAATGAGAATCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp GTCCTCAAGCTTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTGCTATTTGGGGTCTCTaGAAATTCCCTGTCCCTTCT +
Preference number: 5 (lower is better)
Translates to: VLKLGSHLPQWLVRSQQLAIWGL*KFPVPS
Trigger: AGAAGGGACAGGGAATTTCAAGAGACCCCAAATAGC...AAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAAGCTTGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp CATACCTCGCCAAACCCTCACACCCTGCAAAGGAATGTGGTGCCTGTGTCTACTTTGTTCATGTCGGGGTaGCGGGCGTCGAAGTATCCA +
Preference number: 5 (lower is better)
Translates to: HTSPNPHTLQRNVVPVSTLFMSG*RASKYP
Trigger: TGGATACTTCGACGCCCGCAACCCCGACATGAACAA...AGTAGACACAGGCACCACATTCCTTTGCAGGGTGTGAGGGTTTGGCGAGGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp TTGGCTCCCATCTGCCACAGTGGCTGGTCCGATCCCAGCAGCTTCTCCAGAAGGTCACAGTGCTCGATCTaGCATTTGATGCACTTGTTC +
Preference number: 5 (lower is better)
Translates to: LAPICHSGWSDPSSFSRRSQCSI*HLMHLF
Trigger: GAACAAGTGCATCAAATGCAAGATCGAGCACTGTGA...CCTTCTGGAGAAGCTGCTGGGATCGGACCAGCCACTGTGGCAGATGGGAGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp ACCAGAATCCCTCCTGCTGCAAGATGGCCGGGGCCCTTTCTCCCGTCCTTTAAGGCTATTTGGGGTCTCTaGAAATTCCCTGTCCCTTCT +
Preference number: 5 (lower is better)
Translates to: TRIPPAARWPGPFLPSFKAIWGL*KFPVPS
Trigger: AGAAGGGACAGGGAATTTCAAGAGACCCCAAATAGC...CTTAAAGGACGGGAGAAAGGGCCCCGGCCATCTTGCAGCAGGAGGGATTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp GAAGGCTCCCCTCTGCAGTTTGGTCTCAGATGCTGGGAAGTGTTGTCTCTGACATGCCTTTGGGCAGGATaGTCCCCAACCATCACTGGA +
Preference number: 5 (lower is better)
Translates to: EGSPLQFGLRCWEVLSLTCLWAG*SPTITG
Trigger: TCCAGTGATGGTTGGGGACAATCCTGCCCAAAGGCA...TGTCAGAGACAACACTTCCCAGCATCTGAGACCAAACTGCAGAGGGGAGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp AGTAACAAGGATATAGACAGCCTGTTTACCACCGTCAGAGCAGCCCCTAAGTTTCACTCCATGGTGCCATaGGCAGCTGAGGAGCCCTCG +
Preference number: 5 (lower is better)
Translates to: SNKDIDSLFTTVRAAPKFHSMVP*AAEEPS
Trigger: CGAGGGCTCCTCAGCTGCCAATGGCACCATGGAGTG...AAACTTAGGGGCTGCTCTGACGGTGGTAAACAGGCTGTCTATATCCTTGTTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp CTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTCTTGAGCGTGTGTGTCTaGTGTCTATGTATGCATGGA +
Preference number: 5 (lower is better)
Translates to: LGALETKCVLLGPRDGSVLSVCV*CLCMHG
Trigger: TCCATGCATACATAGACACAAGACACACACGCTCAA...GACACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp TGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTCTGCTATTTGGGGTCTCTaGAAATTCCCTGTCCCTTCT +
Preference number: 5 (lower is better)
Translates to: WELWKPSVYCWARGMEVSAIWGL*KFPVPS
Trigger: AGAAGGGACAGGGAATTTCAAGAGACCCCAAATAGC...AGACACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp CCTACGCACTCCCTTCCCCTGGCAGTGCCACTAGCCCTTCAGTATATAGATTCTAGTGGTCACCTGCCCTaGGCACCATCCTTTTGTAGT +
Preference number: 5 (lower is better)
Translates to: PTHSLPLAVPLALQYIDSSGHLP*APSFCS
Trigger: ACTACAAAAGGATGGTGCCAAGGGCAGGTGACCACT...AGAATCTATATACTGAAGGGCTAGTGGCACTGCCAGGGGAAGGGAGTGCGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp GATTGGAGTGTGTGTGTATGCTTTGCCCCCGACGTTCCAGTTCAGGAAAGCTTGGACAAACACCAGTCCTaGCCAGCGGTGATCTTCTGG +
Preference number: 5 (lower is better)
Translates to: DWSVCVCFAPDVPVQESLDKHQS*PAVIFW
Trigger: CCAGAAGATCACCGCTGGCAAGGACTGGTGTTTGTC...CAAGCTTTCCTGAACTGGAACGTCGGGGGCAAAGCATACACACACACTCCAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401068.1
CDS CCA 90 bp CCCTTGTGCAGGTACAAGCCCTCCTTACACTTGGTGCAGAAGTTATaGCTGAAGCAGGCCTCACAGTGCTCGATCTTGCATTTGATGCAC +
Preference number: 5 (lower is better)
Translates to: PLCRYKPSLHLVQKL*LKQASQCSILHLMH
Trigger: GTGCATCAAATGCAAGATCGAGCACTGTGAGGCCTGCTTCAGCCATAACTTCTGCACCAAGTGTAAGGAGGGCTTGTACCTGCACAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp GGAAGTGTTGTCTCTGACATGTCCACTGGGAGCTCTGGAAACCAAGTGTGTACTCACTTGAGGCAGCCGTaGACTTCAGAGCAGAGCTCA +
Preference number: 5 (lower is better)
Translates to: GSVVSDMSTGSSGNQVCTHLRQP*TSEQSS
Trigger: TGAGCTCTGCTCTGAAGTCAACGGCTGCCTCAAGTG...AGTACACACTTGGTTTCCAGAGCTCCCAGTGGACATGTCAGAGACAACACTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp GGACAGGGGTTTGAGCGTGTGTGTCTTGTGTCTATGTATGCATGGATGGATTGGAGCAGGATGAACAGCTaGGGTGAGCACTTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: GQGFERVCLVSMYAWMDWSRMNS*GEHLRQ
Trigger: CTGCCTCAAGTGCTCACCCAAGCTGTTCATCCTGCT...CCAATCCATCCATGCATACATAGACACAAGACACACACGCTCAAACCCCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp AGGTTTCTTCCCAGGTCACCAGCAGTCCTCAAGCTTGGCTCCCATCTGCCACAGTGCTCGATCTTGCATTaGATGCACTTGTTCATGTCG +
Preference number: 5 (lower is better)
Translates to: RFLPRSPAVLKLGSHLPQCSILH*MHLFMS
Trigger: CGACATGAACAAGTGCATCAAATGCAAGATCGAGCA...CTGTGGCAGATGGGAGCCAAGCTTGAGGACTGCTGGTGACCTGGGAAGAAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp CATACCTCGCCAAACCCTCACACCCTGCAAAGGAATGTGGTGCCTGTGTCTACTAAGCCCTCCTTACACTaGGTGCAGAAGTTATGGCTG +
Preference number: 5 (lower is better)
Translates to: HTSPNPHTLQRNVVPVSTKPSLH*VQKLWL
Trigger: CAGCCATAACTTCTGCACCAAGTGTAAGGAGGGCTT...AGTAGACACAGGCACCACATTCCTTTGCAGGGTGTGAGGGTTTGGCGAGGTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp CCTACGCACTCCCTTCCCCTGGCAGTGCCACTAGCCCTTCAGTATATAGATTCTAAGCCCTCCTTACACTaGGTGCAGAAGTTATGGCTG +
Preference number: 5 (lower is better)
Translates to: PTHSLPLAVPLALQYIDSKPSLH*VQKLWL
Trigger: CAGCCATAACTTCTGCACCAAGTGTAAGGAGGGCTT...AGAATCTATATACTGAAGGGCTAGTGGCACTGCCAGGGGAAGGGAGTGCGTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp TGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTCTTTGAGCGTGTGTGTCTaGTGTCTATGTATGCATGGA +
Preference number: 5 (lower is better)
Translates to: WELWKPSVYCWARGMEVSLSVCV*CLCMHG
Trigger: TCCATGCATACATAGACACAAGACACACACGCTCAA...AGACACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp TGCCTTTGGGCAGGATTGTCCCCAACCATCACTGGAAGCCTACGCACTCCCTTCTTGAGCGTGTGTGTCTaGTGTCTATGTATGCATGGA +
Preference number: 5 (lower is better)
Translates to: CLWAGLSPTITGSLRTPFLSVCV*CLCMHG
Trigger: TCCATGCATACATAGACACAAGACACACACGCTCAA...GAAGGGAGTGCGTAGGCTTCCAGTGATGGTTGGGGACAATCCTGCCCAAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp CCACTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTTGCAAGTATGTATGGTaGTATATGTGGACAGGGGTT +
Preference number: 5 (lower is better)
Translates to: PLGALETKCVLLGPRDGSCKYVW*YMWTGV
Trigger: AACCCCTGTCCACATATACAACCATACATACTTGCA...ACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp ACACTGCTGCCGGGCCATGCTCTGAGTAACAAGGATATAGACAGCCTGTTTACCTTGCATTTGATGCACTaGTTCATGTCGGGGTTGCGG +
Preference number: 5 (lower is better)
Translates to: TLLPGHALSNKDIDSLFTLHLMH*FMSGLR
Trigger: CCGCAACCCCGACATGAACAAGTGCATCAAATGCAA...GGTAAACAGGCTGTCTATATCCTTGTTACTCAGAGCATGGCCCGGCAGCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp GCTTCTCCAGAAGGCTCCCCTCTGCAGTTTGGTCTCAGATGCTGGGAAGTGTTGTGCTCGATCTTGCATTaGATGCACTTGTTCATGTCG +
Preference number: 5 (lower is better)
Translates to: ASPEGSPLQFGLRCWEVLCSILH*MHLFMS
Trigger: CGACATGAACAAGTGCATCAAATGCAAGATCGAGCA...CAACACTTCCCAGCATCTGAGACCAAACTGCAGAGGGGAGCCTTCTGGAGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp CAGTTTGGTCTCAGATGCTGGGAAGTGTTGTCTCTGACATGTCCACTGGGAGCTAAGCCCTCCTTACACTaGGTGCAGAAGTTATGGCTG +
Preference number: 5 (lower is better)
Translates to: QFGLRCWEVLSLTCPLGAKPSLH*VQKLWL
Trigger: CAGCCATAACTTCTGCACCAAGTGTAAGGAGGGCTT...AGCTCCCAGTGGACATGTCAGAGACAACACTTCCCAGCATCTGAGACCAAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp GGACAGGGGTTTGAGCGTGTGTGTCTTGTGTCTATGTATGCATGGATGGATTGGCTCGCTCATTTCACATaGCGCAGGACTACTGCACTC +
Preference number: 5 (lower is better)
Translates to: GQGFERVCLVSMYAWMDWLAHFT*RRTTAL
Trigger: GAGTGCAGTAGTCCTGCGCAATGTGAAATGAGCGAG...CCAATCCATCCATGCATACATAGACACAAGACACACACGCTCAAACCCCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000615459.4
CDS-3UTR CAA 90 bp AGTAACAAGGATATAGACAGCCTGTTTACCACCGTCAGAGCAGCCCCTAAGTTTCACTTGAGGCAGCCGTaGACTTCAGAGCAGAGCTCA +
Preference number: 5 (lower is better)
Translates to: SNKDIDSLFTTVRAAPKFHLRQP*TSEQSS
Trigger: TGAGCTCTGCTCTGAAGTCAACGGCTGCCTCAAGTG...AAACTTAGGGGCTGCTCTGACGGTGGTAAACAGGCTGTCTATATCCTTGTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp TACAATTCCTTGGTGCATGCCTATTTTCTTCCCCACCAACCTCTAAGCTCCACAAGCTTGGGTGAGCACTaGAGGCAGCCGTTGACTTCA +
Preference number: 5 (lower is better)
Translates to: YNSLVHAYFLPHQPLSSTSLGEH*RQPLTS
Trigger: TGAAGTCAACGGCTGCCTCAAGTGCTCACCCAAGCT...TGTGGAGCTTAGAGGTTGGTGGGGAAGAAAATAGGCATGCACCAAGGAATTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp GCAAGTATGTATGGTTGTATATGTGGACAGGGGTTTGAGCGTGTGTGTCTTGTGAGCAGGATGAACAGCTaGGGTGAGCACTTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: ASMYGCICGQGFERVCLVSRMNS*GEHLRQ
Trigger: CTGCCTCAAGTGCTCACCCAAGCTGTTCATCCTGCT...CACAAGACACACACGCTCAAACCCCTGTCCACATATACAACCATACATACTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp GGAAGTGTTGTCTCTGACATGTCCACTGGGAGCTCTGGAAACCAAGTGTGTACTTTGCATTTGATGCACTaGTTCATGTCGGGGTTGCGG +
Preference number: 5 (lower is better)
Translates to: GSVVSDMSTGSSGNQVCTLHLMH*FMSGLR
Trigger: CCGCAACCCCGACATGAACAAGTGCATCAAATGCAA...AGTACACACTTGGTTTCCAGAGCTCCCAGTGGACATGTCAGAGACAACACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp CATACCTCGCCAAACCCTCACACCCTGCAAAGGAATGTGGTGCCTGTGTCTACTTGCTCGATCTTGCATTaGATGCACTTGTTCATGTCG +
Preference number: 5 (lower is better)
Translates to: HTSPNPHTLQRNVVPVSTCSILH*MHLFMS
Trigger: CGACATGAACAAGTGCATCAAATGCAAGATCGAGCA...AGTAGACACAGGCACCACATTCCTTTGCAGGGTGTGAGGGTTTGGCGAGGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp CCTACGCACTCCCTTCCCCTGGCAGTGCCACTAGCCCTTCAGTATATAGATTCTTGCTCGATCTTGCATTaGATGCACTTGTTCATGTCG +
Preference number: 5 (lower is better)
Translates to: PTHSLPLAVPLALQYIDSCSILH*MHLFMS
Trigger: CGACATGAACAAGTGCATCAAATGCAAGATCGAGCA...AGAATCTATATACTGAAGGGCTAGTGGCACTGCCAGGGGAAGGGAGTGCGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp TTTTCTTCCCCACCAACCTCTAAGCTCCACAAGAGCAAGGCCCGTGTTTGGCTCTCACAGTGCTCGATCTaGCATTTGATGCACTTGTTC +
Preference number: 5 (lower is better)
Translates to: FSSPPTSKLHKSKARVWLSQCSI*HLMHLF
Trigger: GAACAAGTGCATCAAATGCAAGATCGAGCACTGTGA...GAGCCAAACACGGGCCTTGCTCTTGTGGAGCTTAGAGGTTGGTGGGGAAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp CCTACGCACTCCCTTCCCCTGGCAGTGCCACTAGCCCTTCAGTATATAGATTCTTCACAGTGCTCGATCTaGCATTTGATGCACTTGTTC +
Preference number: 5 (lower is better)
Translates to: PTHSLPLAVPLALQYIDSSQCSI*HLMHLF
Trigger: GAACAAGTGCATCAAATGCAAGATCGAGCACTGTGA...AGAATCTATATACTGAAGGGCTAGTGGCACTGCCAGGGGAAGGGAGTGCGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp GATATGTATCCTGGAAGGGTAACAATACTCTCCAACGATAAAGTCACACAGCTGTGCTGTTGCTGCCCCTaGCGTCTTCGAGAGCCAGCA +
Preference number: 5 (lower is better)
Translates to: DMYPGRVTILSNDKVTQLCCCCP*RLREPA
Trigger: TGCTGGCTCTCGAAGACGCAAGGGGCAGCAACAGCA...CAGCTGTGTGACTTTATCGTTGGAGAGTATTGTTACCCTTCCAGGATACATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp GATATGTATCCTGGAAGGGTAACAATACTCTCCAACGATAAAGTCACACAGCTGTTGCTGCTGCTGCTGTaGCTGCCCCTTGCGTCTTCG +
Preference number: 5 (lower is better)
Translates to: DMYPGRVTILSNDKVTQLLLLLL*LPLASS
Trigger: CGAAGACGCAAGGGGCAGCAACAGCAGCAGCAGCAA...CAGCTGTGTGACTTTATCGTTGGAGAGTATTGTTACCCTTCCAGGATACATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp AGTAACAAGGATATAGACAGCCTGTTTACCACCGTCAGAGCAGCCCCTAAGTTTGTGTGTGTGTATGCTTaGCCCCCGACGTTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: SNKDIDSLFTTVRAAPKFVCVYA*PPTFQF
Trigger: GAACTGGAACGTCGGGGGCAAAGCATACACACACAC...AAACTTAGGGGCTGCTCTGACGGTGGTAAACAGGCTGTCTATATCCTTGTTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp GAGATTCTCATTCCTAACAAGCTGCCCTGTGACAACACTGCTGCCGGGCCATGCTGCAAGTATGTATGGTaGTATATGTGGACAGGGGTT +
Preference number: 5 (lower is better)
Translates to: EILIPNKLPCDNTAAGPCCKYVW*YMWTGV
Trigger: AACCCCTGTCCACATATACAACCATACATACTTGCA...GCATGGCCCGGCAGCAGTGTTGTCACAGGGCAGCTTGTTAGGAATGAGAATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp GAGATTCTCATTCCTAACAAGCTGCCCTGTGACAACACTGCTGCCGGGCCATGCCAGCACTTCTCAAATTaGGGTAACATGCCAATCATC +
Preference number: 5 (lower is better)
Translates to: EILIPNKLPCDNTAAGPCQHFSN*GNMPII
Trigger: GATGATTGGCATGTTACCCAAATTTGAGAAGTGCTG...GCATGGCCCGGCAGCAGTGTTGTCACAGGGCAGCTTGTTAGGAATGAGAATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp AGTAACAAGGATATAGACAGCCTGTTTACCACCGTCAGAGCAGCCCCTAAGTTTTGCCTTTGGGCAGGATaGTCCCCAACCATCACTGGA +
Preference number: 5 (lower is better)
Translates to: SNKDIDSLFTTVRAAPKFCLWAG*SPTITG
Trigger: TCCAGTGATGGTTGGGGACAATCCTGCCCAAAGGCA...AAACTTAGGGGCTGCTCTGACGGTGGTAAACAGGCTGTCTATATCCTTGTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp CTGGGAGCTCTGGAAACCAAGTGTGTACTGCTGGGCCCGAGGGATGGAAGTGTCTGTTTGTACAATTCCTaGGTGCATGCCTATTTTCTT +
Preference number: 5 (lower is better)
Translates to: LGALETKCVLLGPRDGSVCLYNS*VHAYFL
Trigger: AAGAAAATAGGCATGCACCAAGGAATTGTACAAACA...GACACTTCCATCCCTCGGGCCCAGCAGTACACACTTGGTTTCCAGAGCTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp ACACTGCTGCCGGGCCATGCTCTGAGTAACAAGGATATAGACAGCCTGTTTACCCATGAGTCCTTACAGTaGACAAACACCAGTCCTTGC +
Preference number: 5 (lower is better)
Translates to: TLLPGHALSNKDIDSLFTHESLQ*TNTSPC
Trigger: GCAAGGACTGGTGTTTGTCAACTGTAAGGACTCATG...GGTAAACAGGCTGTCTATATCCTTGTTACTCAGAGCATGGCCCGGCAGCAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401068.1
CDS-3UTR CAA 90 bp TCAGGAATCTTAAAATTTAGACTCTGGCTCACCAGGTCTGGAATGAGACCTGAGAGCAGGATGAACAGCTaGGGTGAGCACTTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: SGILKFRLWLTRSGMRPESRMNS*GEHLRQ
Trigger: CTGCCTCAAGTGCTCACCCAAGCTGTTCATCCTGCT...CTCAGGTCTCATTCCAGACCTGGTGAGCCAGAGTCTAAATTTTAAGATTCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp AGTAACAAGGATATAGACAGCCTGTTTACCACCGTCAGAGCAGCCCCTAAGTTTCTCGCTCATTTCACATaGCGCAGGACTACTGCACTC +
Preference number: 5 (lower is better)
Translates to: SNKDIDSLFTTVRAAPKFLAHFT*RRTTAL
Trigger: GAGTGCAGTAGTCCTGCGCAATGTGAAATGAGCGAG...AAACTTAGGGGCTGCTCTGACGGTGGTAAACAGGCTGTCTATATCCTTGTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000615459.4
CDS-3UTR CAA 90 bp CAATCATCAGGAATCTTAAAATTTAGACTCTGGCTCACCAGGTCTGGAATGAGATTGCTGCTGCTGCTGTaGCTGCCCCTTGCGTCTTCG +
Preference number: 5 (lower is better)
Translates to: QSSGILKFRLWLTRSGMRLLLLL*LPLASS
Trigger: CGAAGACGCAAGGGGCAGCAACAGCAGCAGCAGCAA...TCTCATTCCAGACCTGGTGAGCCAGAGTCTAAATTTTAAGATTCCTGATGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp TATGGTTGTATATGTGGACAGGGGTTTGAGCGTGTGTGTCTTGTGTCTATGTATTTGTTCATGTCGGGGTaGCGGGCGTCGAAGTATCCA +
Preference number: 5 (lower is better)
Translates to: YGCICGQGFERVCLVSMYLFMSG*RASKYP
Trigger: TGGATACTTCGACGCCCGCAACCCCGACATGAACAA...ATACATAGACACAAGACACACACGCTCAAACCCCTGTCCACATATACAACCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp GGACAGGGGTTTGAGCGTGTGTGTCTTGTGTCTATGTATGCATGGATGGATTGGTCACAGTGCTCGATCTaGCATTTGATGCACTTGTTC +
Preference number: 5 (lower is better)
Translates to: GQGFERVCLVSMYAWMDWSQCSI*HLMHLF
Trigger: GAACAAGTGCATCAAATGCAAGATCGAGCACTGTGA...CCAATCCATCCATGCATACATAGACACAAGACACACACGCTCAAACCCCTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp GATATGTATCCTGGAAGGGTAACAATACTCTCCAACGATAAAGTCACACAGCTGGTGTGTGTGTATGCTTaGCCCCCGACGTTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: DMYPGRVTILSNDKVTQLVCVYA*PPTFQF
Trigger: GAACTGGAACGTCGGGGGCAAAGCATACACACACAC...CAGCTGTGTGACTTTATCGTTGGAGAGTATTGTTACCCTTCCAGGATACATATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp TGGATGGATTGGAGTGTGTGTGTATGCTTTGCCCCCGACGTTCCAGTTCAGGAATGCAAGTATGTATGGTaGTATATGTGGACAGGGGTT +
Preference number: 5 (lower is better)
Translates to: WMDWSVCVCFAPDVPVQECKYVW*YMWTGV
Trigger: AACCCCTGTCCACATATACAACCATACATACTTGCA...TTCCTGAACTGGAACGTCGGGGGCAAAGCATACACACACACTCCAATCCATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp GAGATTCTCATTCCTAACAAGCTGCCCTGTGACAACACTGCTGCCGGGCCATGCTGTTTGTACAATTCCTaGGTGCATGCCTATTTTCTT +
Preference number: 5 (lower is better)
Translates to: EILIPNKLPCDNTAAGPCCLYNS*VHAYFL
Trigger: AAGAAAATAGGCATGCACCAAGGAATTGTACAAACA...GCATGGCCCGGCAGCAGTGTTGTCACAGGGCAGCTTGTTAGGAATGAGAATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp CAATCATCAGGAATCTTAAAATTTAGACTCTGGCTCACCAGGTCTGGAATGAGAAGCTTGGGTGAGCACTaGAGGCAGCCGTTGACTTCA +
Preference number: 5 (lower is better)
Translates to: QSSGILKFRLWLTRSGMRSLGEH*RQPLTS
Trigger: TGAAGTCAACGGCTGCCTCAAGTGCTCACCCAAGCT...TCTCATTCCAGACCTGGTGAGCCAGAGTCTAAATTTTAAGATTCCTGATGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp CAATCATCAGGAATCTTAAAATTTAGACTCTGGCTCACCAGGTCTGGAATGAGAGTGTGTGTGTATGCTTaGCCCCCGACGTTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: QSSGILKFRLWLTRSGMRVCVYA*PPTFQF
Trigger: GAACTGGAACGTCGGGGGCAAAGCATACACACACAC...TCTCATTCCAGACCTGGTGAGCCAGAGTCTAAATTTTAAGATTCCTGATGATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp GGACAGGGGTTTGAGCGTGTGTGTCTTGTGTCTATGTATGCATGGATGGATTGGCAGCACTTCTCAAATTaGGGTAACATGCCAATCATC +
Preference number: 5 (lower is better)
Translates to: GQGFERVCLVSMYAWMDWQHFSN*GNMPII
Trigger: GATGATTGGCATGTTACCCAAATTTGAGAAGTGCTG...CCAATCCATCCATGCATACATAGACACAAGACACACACGCTCAAACCCCTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp CCTACGCACTCCCTTCCCCTGGCAGTGCCACTAGCCCTTCAGTATATAGATTCTTGTTTGTACAATTCCTaGGTGCATGCCTATTTTCTT +
Preference number: 5 (lower is better)
Translates to: PTHSLPLAVPLALQYIDSCLYNS*VHAYFL
Trigger: AAGAAAATAGGCATGCACCAAGGAATTGTACAAACA...AGAATCTATATACTGAAGGGCTAGTGGCACTGCCAGGGGAAGGGAGTGCGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp GATATGTATCCTGGAAGGGTAACAATACTCTCCAACGATAAAGTCACACAGCTGAGTGGTCACCTGCCCTaGGCACCATCCTTTTGTAGT +
Preference number: 5 (lower is better)
Translates to: DMYPGRVTILSNDKVTQLSGHLP*APSFCS
Trigger: ACTACAAAAGGATGGTGCCAAGGGCAGGTGACCACT...CAGCTGTGTGACTTTATCGTTGGAGAGTATTGTTACCCTTCCAGGATACATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp TATGGTTGTATATGTGGACAGGGGTTTGAGCGTGTGTGTCTTGTGTCTATGTATAGTGGTCACCTGCCCTaGGCACCATCCTTTTGTAGT +
Preference number: 5 (lower is better)
Translates to: YGCICGQGFERVCLVSMYSGHLP*APSFCS
Trigger: ACTACAAAAGGATGGTGCCAAGGGCAGGTGACCACT...ATACATAGACACAAGACACACACGCTCAAACCCCTGTCCACATATACAACCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp CAGTTTGGTCTCAGATGCTGGGAAGTGTTGTCTCTGACATGTCCACTGGGAGCTCATTTATCTTTATGGTaGATTGCCTCGACACCAAAG +
Preference number: 5 (lower is better)
Translates to: QFGLRCWEVLSLTCPLGAHLSLW*IASTPK
Trigger: CTTTGGTGTCGAGGCAATCAACCATAAAGATAAATG...AGCTCCCAGTGGACATGTCAGAGACAACACTTCCCAGCATCTGAGACCAAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401068.1
CDS-3UTR CAA 90 bp CCTTGGCACCATCCTTTTGTAGTTATATATGTGTTTGTACAATTCCTTGGTGCAAAACCAACCCAGTCCTaGCCAGCGGTGATCTTCTGG +
Preference number: 5 (lower is better)
Translates to: PWHHPFVVIYVFVQFLGAKPTQS*PAVIFW
Trigger: CCAGAAGATCACCGCTGGCAAGGACTGGGTTGGTTT...TGCACCAAGGAATTGTACAAACACATATATAACTACAAAAGGATGGTGCCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp AGTAACAAGGATATAGACAGCCTGTTTACCACCGTCAGAGCAGCCCCTAAGTTTTTGAGCGTGTGTGTCTaGTGTCTATGTATGCATGGA +
Preference number: 5 (lower is better)
Translates to: SNKDIDSLFTTVRAAPKFLSVCV*CLCMHG
Trigger: TCCATGCATACATAGACACAAGACACACACGCTCAA...AAACTTAGGGGCTGCTCTGACGGTGGTAAACAGGCTGTCTATATCCTTGTTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS-3UTR CAA 90 bp TATGGTTGTATATGTGGACAGGGGTTTGAGCGTGTGTGTCTTGTGTCTATGTATGCTATTTGGGGTCTCTaGAAATTCCCTGTCCCTTCT +
Preference number: 5 (lower is better)
Translates to: YGCICGQGFERVCLVSMYAIWGL*KFPVPS
Trigger: AGAAGGGACAGGGAATTTCAAGAGACCCCAAATAGC...ATACATAGACACAAGACACACACGCTCAAACCCCTGTCCACATATACAACCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS GCA 72 bp CTGGCCGGTCGCTCCGGGCTCTCTGCCCTGCGCTGGTaGTCTCCGTCGCGCCTCCGCTCGGCCGGAGCTCCC +
Preference number: 6 (lower is better)
Translates to: LAGRSGLSALRW*SPSRLRSAGAP
Trigger: GGGAGCTCCGGCCGAGCGGAGGCGCGACGGAGAGCACCAGCGCAGGGCAGAGAGCCCGGAGCGACCGGCCAG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356545.7
CDS CAA 90 bp TCCTGGGCGCCCGGCTCGCCTGCGCTCCGCCCGCCCGTTCCCAAGTaGCTCAATCTGCGGACGGCTCACGCCCTCGGGGCCAGCGCCCCA +
Preference number: 6 (lower is better)
Translates to: SWAPGSPALRPPVPK*LNLRTAHALGASAP
Trigger: TGGGGCGCTGGCCCCGAGGGCGTGAGCCGTCCGCAGATTGAGCAACTTGGGAACGGGCGGGCGGAGCGCAGGCGAGCCGGGCGCCCAGGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356545.7
CDS GCA 72 bp GCCCTACTCTGGCCGGTCGCTCCGGGCTCTCTGCCCTaGGCTGGTGCTCTCCGTCGCGCCTCCGCTCGGCCG +
Preference number: 6 (lower is better)
Translates to: ALLWPVAPGSLP*AGALRRASARP
Trigger: CGGCCGAGCGGAGGCGCGACGGAGAGCACCAGCGCAGGGCAGAGAGCCCGGAGCGACCGGCCAGAGTAGGGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356545.7
CDS GCA 72 bp CACCCGGCGCATCGGTCCTCCGGGGCGGCTCGGAGCTaGCCTCGTTCTCCGCAGCACCCGAGCGGATGCCCT +
Preference number: 6 (lower is better)
Translates to: HPAHRSSGAARS*PRSPQHPSGCP
Trigger: AGGGCATCCGCTCGGGTGCTGCGGAGAACGAGGGCAGCTCCGAGCCGCCCCGGAGGACCGATGCGCCGGGTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356545.7
CDS CCA 72 bp ACTCTGGCCGGTCGCTCCGGGCTCTCTGCCCTGCGCTaGTGCTCTCCGTCGCGCCTCCGCTCGGCCGGAGCT +
Preference number: 6 (lower is better)
Translates to: TLAGRSGLSALR*CSPSRLRSAGA
Trigger: AGCTCCGGCCGAGCGGAGGCGCGACGGAGAGCACCAGCGCAGGGCAGAGAGCCCGGAGCGACCGGCCAGAGT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356545.7
CDS CAA 72 bp CCCGGCTCGCCTGCGCTCCGCCCGCCCGTTCCCAAGTaGCTCAATCTGCGGACGGCTCACGCCCTCGGGGCC +
Preference number: 6 (lower is better)
Translates to: PGSPALRPPVPK*LNLRTAHALGA
Trigger: GGCCCCGAGGGCGTGAGCCGTCCGCAGATTGAGCAACTTGGGAACGGGCGGGCGGAGCGCAGGCGAGCCGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356545.7
CDS GCA 72 bp CGGATGCCCTACTCTGGCCGGTCGCTCCGGGCTCTCTaGCCTGCGCTGGTGCTCTCCGTCGCGCCTCCGCTC +
Preference number: 6 (lower is better)
Translates to: RMPYSGRSLRAL*PALVLSVAPPL
Trigger: GAGCGGAGGCGCGACGGAGAGCACCAGCGCAGGGCAGAGAGCCCGGAGCGACCGGCCAGAGTAGGGCATCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356545.7
CDS GCA 72 bp CTGCGCTCCGCCCGCCCGTTCCCAAGTTGCTCAATCTaGGGACGGCTCACGCCCTCGGGGCCAGCGCCCCAC +
Preference number: 6 (lower is better)
Translates to: LRSARPFPSCSI*GRLTPSGPAPH
Trigger: GTGGGGCGCTGGCCCCGAGGGCGTGAGCCGTCCGCAGATTGAGCAACTTGGGAACGGGCGGGCGGAGCGCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356545.7
CDS GCA 72 bp CCGGCTCGCCTGCGCTCCGCCCGCCCGTTCCCAAGTTaGTCAATCTGCGGACGGCTCACGCCCTCGGGGCCA +
Preference number: 6 (lower is better)
Translates to: PARLRSARPFPS*SICGRLTPSGP
Trigger: TGGCCCCGAGGGCGTGAGCCGTCCGCAGATTGAGCAACTTGGGAACGGGCGGGCGGAGCGCAGGCGAGCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356545.7
CDS GCA 72 bp CGGAGCTGCCCTCGTTCTCCGCAGCACCCGAGCGGATaGCCTACTCTGGCCGGTCGCTCCGGGCTCTCTGCC +
Preference number: 6 (lower is better)
Translates to: RSCPRSPQHPSG*PTLAGRSGLSA
Trigger: GGCAGAGAGCCCGGAGCGACCGGCCAGAGTAGGGCATCCGCTCGGGTGCTGCGGAGAACGAGGGCAGCTCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356545.7
CDS CCA 72 bp CTCGTTCTCCGCAGCACCCGAGCGGATGCCCTACTCTaGCCGGTCGCTCCGGGCTCTCTGCCCTGCGCTGGT +
Preference number: 6 (lower is better)
Translates to: LVLRSTRADALL*PVAPGSLPCAG
Trigger: ACCAGCGCAGGGCAGAGAGCCCGGAGCGACCGGCCAGAGTAGGGCATCCGCTCGGGTGCTGCGGAGAACGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356545.7
CDS GCA 72 bp CGCTCCTCGGAGCCCCTCCGGAAACCACAGAGCTGCTaGTTCTTGGAGCAGGGCCCCCACGGAGACCACTCG +
Preference number: 6 (lower is better)
Translates to: RSSEPLRKPQSC*FLEQGPHGDHS
Trigger: CGAGTGGTCTCCGTGGGGGCCCTGCTCCAAGAAGCAGCAGCTCTGTGGTTTCCGGAGGGGCTCCGAGGAGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000615459.4
CDS CCA 72 bp ACGGCACTCTCCTCACTGTGCACCTCCGGGTCTCCTTaGTGTCAGAGCAGGCAGCATGGTCCCCCACAGGGG +
Preference number: 6 (lower is better)
Translates to: TALSSLCTSGSP*CQSRQHGPPQG
Trigger: CCCCTGTGGGGGACCATGCTGCCTGCTCTGACACCAAGGAGACCCGGAGGTGCACAGTGAGGAGAGTGCCGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000615459.4
CDS CCA 72 bp TTCGAGAGCCAGCACCCGCCTCCTTGCTCTCCTTCCTaGCCAGGTTCCTGTTGGCATTCTCCCGCCGGCCCT +
Preference number: 6 (lower is better)
Translates to: FESQHPPPCSPS*PGSCWHSPAGP
Trigger: AGGGCCGGCGGGAGAATGCCAACAGGAACCTGGCCAGGAAGGAGAGCAAGGAGGCGGGTGCTGGCTCTCGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS CAA 72 bp CACGGCACTCTCCTCACTGTGCACCTCCGGGTCTCCTaGGTGTCAGAGCAGGCAGCATGGTCCCCCACAGGG +
Preference number: 6 (lower is better)
Translates to: HGTLLTVHLRVS*VSEQAAWSPTG
Trigger: CCCTGTGGGGGACCATGCTGCCTGCTCTGACACCAAGGAGACCCGGAGGTGCACAGTGAGGAGAGTGCCGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000615459.4
CDS CAA 90 bp GTCCGCTCCTCGGAGCCCCTCCGGAAACCACAGAGCTGCTGCTTCTaGGAGCAGGGCCCCCACGGAGACCACTCGCTCATTTCACATTGC +
Preference number: 6 (lower is better)
Translates to: VRSSEPLRKPQSCCF*EQGPHGDHSLISHC
Trigger: GCAATGTGAAATGAGCGAGTGGTCTCCGTGGGGGCCCTGCTCCAAGAAGCAGCAGCTCTGTGGTTTCCGGAGGGGCTCCGAGGAGCGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000615459.4
CDS GCA 72 bp TCTTCTGCCCCTCAGGACACGGCACTCTCCTCACTGTaGACCTCCGGGTCTCCTTGGTGTCAGAGCAGGCAG +
Preference number: 6 (lower is better)
Translates to: SSAPQDTALSSL*TSGSPWCQSRQ
Trigger: CTGCCTGCTCTGACACCAAGGAGACCCGGAGGTGCACAGTGAGGAGAGTGCCGTGTCCTGAGGGGCAGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000615459.4
CDS GCA 72 bp GCAGATGTGAGTGGCCCCACTGTCCCTTGCTGCTGCTaGTGTTGCTGCCCCTTGCGTCTTCGAGAGCCAGCA +
Preference number: 6 (lower is better)
Translates to: ADVSGPTVPCCC*CCCPLRLREPA
Trigger: TGCTGGCTCTCGAAGACGCAAGGGGCAGCAACAGCAGCAGCAGCAAGGGACAGTGGGGCCACTCACATCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS CCA 72 bp TATCCAGGTGGGCAGGACGGCAAGCAGACGCCCACCTaGCGGATGTCGTTCCTCTCCAGCAGGATGAACAGC +
Preference number: 6 (lower is better)
Translates to: YPGGQDGKQTPT*RMSFLSSRMNS
Trigger: GCTGTTCATCCTGCTGGAGAGGAACGACATCCGCCAGGTGGGCGTCTGCTTGCCGTCCTGCCCACCTGGATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS CCA 72 bp CACATTGCGCAGGACTACTGCACTCCATGGTGCCATTaGCAGCTGAGGAGCCCTCGGGACAAGCTGGATAGC +
Preference number: 6 (lower is better)
Translates to: HIAQDYCTPWCH*QLRSPRDKLDS
Trigger: GCTATCCAGCTTGTCCCGAGGGCTCCTCAGCTGCCAATGGCACCATGGAGTGCAGTAGTCCTGCGCAATGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000615459.4
CDS CCA 72 bp TCTTCTGCCCAGGACTACTGCACTCCATGGTGCCATTaGCAGCTGAGGAGCCCTCGGGACAAGCTGGATAGC +
Preference number: 6 (lower is better)
Translates to: SSAQDYCTPWCH*QLRSPRDKLDS
Trigger: GCTATCCAGCTTGTCCCGAGGGCTCCTCAGCTGCCAATGGCACCATGGAGTGCAGTAGTCCTGGGCAGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612451.4
CDS CAA 90 bp CTCTCCAGCAGGATGAACAGCTTGGGTGAGCACTTGAGGCAGCCGTaGACTTCAGAGCAGAGCTCACAGCCTTTGGCACAGGCCTGGCTC +
Preference number: 6 (lower is better)
Translates to: LSSRMNSLGEHLRQP*TSEQSSQPLAQAWL
Trigger: GAGCCAGGCCTGTGCCAAAGGCTGTGAGCTCTGCTCTGAAGTCAACGGCTGCCTCAAGTGCTCACCCAAGCTGTTCATCCTGCTGGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS CAA 90 bp ACGCCCACCTGGCGGATGTCGTTCCTCTCCAGCAGGATGAACAGCTaGGGTGAGCACTTGAGGCAGCCGTTGACTTCAGAGCAGAGCTCA +
Preference number: 6 (lower is better)
Translates to: TPTWRMSFLSSRMNS*GEHLRQPLTSEQSS
Trigger: TGAGCTCTGCTCTGAAGTCAACGGCTGCCTCAAGTGCTCACCCAAGCTGTTCATCCTGCTGGAGAGGAACGACATCCGCCAGGTGGGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS CCA 72 bp CGCTCATTTCACATTGCGCAGGACTACTGCACTCCATaGTGCCATTGGCAGCTGAGGAGCCCTCGGGACAAG +
Preference number: 6 (lower is better)
Translates to: RSFHIAQDYCTP*CHWQLRSPRDK
Trigger: CTTGTCCCGAGGGCTCCTCAGCTGCCAATGGCACCATGGAGTGCAGTAGTCCTGCGCAATGTGAAATGAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000615459.4
CDS CAA 90 bp TCACAGTGCTCGATCTTGCATTTGATGCACTTGTTCATGTCGGGGTaGCGGGCGTCGAAGTATCCAGGTGGGCAGGACGGCAAGCAGACG +
Preference number: 6 (lower is better)
Translates to: SQCSILHLMHLFMSG*RASKYPGGQDGKQT
Trigger: CGTCTGCTTGCCGTCCTGCCCACCTGGATACTTCGACGCCCGCAACCCCGACATGAACAAGTGCATCAAATGCAAGATCGAGCACTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS GCA 72 bp TCATTTCACATTGCGCAGGACTACTGCACTCCATGGTaGCATTGGCAGCTGAGGAGCCCTCGGGACAAGCTG +
Preference number: 6 (lower is better)
Translates to: SFHIAQDYCTPW*HWQLRSPRDKL
Trigger: CAGCTTGTCCCGAGGGCTCCTCAGCTGCCAATGGCACCATGGAGTGCAGTAGTCCTGCGCAATGTGAAATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000615459.4
CDS CAA 72 bp TGGCGGATGTCGTTCCTCTCCAGCAGGATGAACAGCTaGGGTGAGCACTTGAGGCAGCCGTTGACTTCAGAG +
Preference number: 6 (lower is better)
Translates to: WRMSFLSSRMNS*GEHLRQPLTSE
Trigger: CTCTGAAGTCAACGGCTGCCTCAAGTGCTCACCCAAGCTGTTCATCCTGCTGGAGAGGAACGACATCCGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS CAA 72 bp TCGATCTTGCATTTGATGCACTTGTTCATGTCGGGGTaGCGGGCGTCGAAGTATCCAGGTGGGCAGGACGGC +
Preference number: 6 (lower is better)
Translates to: SILHLMHLFMSG*RASKYPGGQDG
Trigger: GCCGTCCTGCCCACCTGGATACTTCGACGCCCGCAACCCCGACATGAACAAGTGCATCAAATGCAAGATCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS TCA 72 bp TCCTTGCCAGCGGTGATCTTCTGGCCCACTCCCACCTaGATCACCAGGAAACCACAATCTCAGCTTCGTGCT +
Preference number: 6 (lower is better)
Translates to: SLPAVIFWPTPT*ITRKPQSQLRA
Trigger: AGCACGAAGCTGAGATTGTGGTTTCCTGGTGATTCAGGTGGGAGTGGGCCAGAAGATCACCGCTGGCAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS TCA 72 bp GATGTCGTTCCTCTCCAGCAGGATGAACAGCTTGGGTaGGCACTTGAGGCAGCCGTTGACTTCAGAGCAGAG +
Preference number: 6 (lower is better)
Translates to: DVVPLQQDEQLG*ALEAAVDFRAE
Trigger: CTCTGCTCTGAAGTCAACGGCTGCCTCAAGTGCTCACCCAAGCTGTTCATCCTGCTGGAGAGGAACGACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS CAA 72 bp AGGATGAACAGCTTGGGTGAGCACTTGAGGCAGCCGTaGACTTCAGAGCAGAGCTCACAGCCTTTGGCACAG +
Preference number: 6 (lower is better)
Translates to: RMNSLGEHLRQP*TSEQSSQPLAQ
Trigger: CTGTGCCAAAGGCTGTGAGCTCTGCTCTGAAGTCAACGGCTGCCTCAAGTGCTCACCCAAGCTGTTCATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS CAA 72 bp TTCCTCTCCAGCAGGATGAACAGCTTGGGTGAGCACTaGAGGCAGCCGTTGACTTCAGAGCAGAGCTCACAG +
Preference number: 6 (lower is better)
Translates to: FLSSRMNSLGEH*RQPLTSEQSSQ
Trigger: CTGTGAGCTCTGCTCTGAAGTCAACGGCTGCCTCAAGTGCTCACCCAAGCTGTTCATCCTGCTGGAGAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS TCA 72 bp TCCTTACAGTTGACAAACACCAGTCCTTGCCAGCGGTaGTCTTCTGGCCCACTCCCACCTGAATCACCAGGA +
Preference number: 6 (lower is better)
Translates to: SLQLTNTSPCQR*SSGPLPPESPG
Trigger: TCCTGGTGATTCAGGTGGGAGTGGGCCAGAAGATCACCGCTGGCAAGGACTGGTGTTTGTCAACTGTAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401068.1
CDS TCA 72 bp GCCTGGCTCCCCTCGGCACTGACTCGGAATATCATATaGGAGATCTTTTTGTCACGTCAGCAGGGACTACTC +
Preference number: 6 (lower is better)
Translates to: AWLPSALTRNII*EIFLSRQQGLL
Trigger: GAGTAGTCCCTGCTGACGTGACAAAAAGATCTCTCATATGATATTCCGAGTCAGTGCCGAGGGGAGCCAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615459.4
CDS CCA 72 bp AGGTACAAGCCCTCCTTACACTTGGTGCAGAAGTTATaGCTGAAGCAGGCCTCACAGTGCTCGATCTTGCAT +
Preference number: 6 (lower is better)
Translates to: RYKPSLHLVQKL*LKQASQCSILH
Trigger: ATGCAAGATCGAGCACTGTGAGGCCTGCTTCAGCCATAACTTCTGCACCAAGTGTAAGGAGGGCTTGTACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4
ENST00000615459.4
CDS TCA 72 bp AGAGAGACTTCCTCAAAGATACCTCGGAATATCATATaGGAGATCTTTTTGTCACGTCAGCAGGGACTACTC +
Preference number: 6 (lower is better)
Translates to: RETSSKIPRNII*EIFLSRQQGLL
Trigger: GAGTAGTCCCTGCTGACGTGACAAAAAGATCTCTCATATGATATTCCGAGGTATCTTTGAGGAAGTCTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356545.7
ENST00000401068.1
ENST00000612451.4