RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RSPH9 (Homo sapiens)

Ensembl gene IDs: ENSG00000172426

Ensembl transcript IDs: ENST00000372163.5, ENST00000372165.8

Found 267 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGGAGCTTGTGGCCCTGGGCTGCCTGAACCTGGCCACACAGGCTTaGGGCAGCAAGAGCCCAGCCCATCTGTTTACAGGACGCTCAGCA +
Preference number: 1 (lower is better)
Translates to: RELVALGCLNLATQA*GSKSPAHLFTGRSA
Trigger: TGCTGAGCGTCCTGTAAACAGATGGGCTGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCAGGTTCAGGCAGCCCAGGGCCACAAGCTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR TCA 90 bp AGGGAAACTGGTGAAAGGATTTGCTTGCCCAACCGTGGCCTGGCCTaGGGAGGTAGTGCTCCACTCTCCCACGTCCAGCTTGGGCCCCCA +
Preference number: 1 (lower is better)
Translates to: RETGERICLPNRGLA*GGSAPLSHVQLGPP
Trigger: TGGGGGCCCAAGCTGGACGTGGGAGAGTGGAGCACTACCTCCTCAGGCCAGGCCACGGTTGGGCAAGCAAATCCTTTCACCAGTTTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR TCA 90 bp GCAGGGAGCCAAGGTGGGCTGCCTGACACACTTGCCGCTCTCGTGTaGATCCAAGAAACTGCGTTCCTCAAAGGGGCCCTGGTTGTCACC +
Preference number: 1 (lower is better)
Translates to: AGSQGGLPDTLAALV*IQETAFLKGALVVT
Trigger: GGTGACAACCAGGGCCCCTTTGAGGAACGCAGTTTCTTGGATTCACACGAGAGCGGCAAGTGTGTCAGGCAGCCCACCTTGGCTCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR CCA 90 bp AATCCTAGCCGGCATGAGCCACTTTTCTGGGAACTATCAGGGCCCTaGCCATCCCCAAAGGAGGCCAAAGGTCCATGGGCGGCAGCCATC +
Preference number: 1 (lower is better)
Translates to: NPSRHEPLFWELSGP*PSPKEAKGPWAAAI
Trigger: GATGGCTGCCGCCCATGGACCTTTGGCCTCCTTTGGGGATGGCCAGGGCCCTGATAGTTCCCAGAAAAGTGGCTCATGCCGGCTAGGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR GCA 90 bp GTCATAAACTGGGTTCATGGGCTTACCCATTGGGTGTGCGCTCACTaGTTGGGAAGTGCAGGGGGTCCTGGGCACATTGCCAGCTGGGTG +
Preference number: 1 (lower is better)
Translates to: VINWVHGLTHWVCAH*LGSAGGPGHIASWV
Trigger: CACCCAGCTGGCAATGTGCCCAGGACCCCCTGCACTTCCCAAGCAGTGAGCGCACACCCAATGGGTAAGCCCATGAACCCAGTTTATGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR CCA 90 bp AGGAAAGGGAAACTGGTGAAAGGATTTGCTTGCCCAACCGTGGCCTaGCCTGAGGAGGTAGTGCTCCACTCTCCCACGTCCAGCTTGGGC +
Preference number: 1 (lower is better)
Translates to: RKGKLVKGFACPTVA*PEEVVLHSPTSSLG
Trigger: GCCCAAGCTGGACGTGGGAGAGTGGAGCACTACCTCCTCAGGCCAGGCCACGGTTGGGCAAGCAAATCCTTTCACCAGTTTCCCTTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR TCA 90 bp AGCTCCTTACTGTGGGAGAGCTGCAGGGAGCCAAGGTGGGCTGCCTaGCACACTTGCCGCTCTCGTGTGAATCCAAGAAACTGCGTTCCT +
Preference number: 1 (lower is better)
Translates to: SSLLWESCREPRWAA*HTCRSRVNPRNCVP
Trigger: AGGAACGCAGTTTCTTGGATTCACACGAGAGCGGCAAGTGTGTCAGGCAGCCCACCTTGGCTCCCTGCAGCTCTCCCACAGTAAGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR TCA 90 bp ATTGACATTTACAAAGATCAAGGGAGCTTGTGGCCCTGGGCTGCCTaGACCTGGCCACACAGGCTTGCGGCAGCAAGAGCCCAGCCCATC +
Preference number: 1 (lower is better)
Translates to: IDIYKDQGSLWPWAA*TWPHRLAAARAQPI
Trigger: GATGGGCTGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCAGGTTCAGGCAGCCCAGGGCCACAAGCTCCCTTGATCTTTGTAAATGTCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR GCA 90 bp CAACGCAGTGTCATAAACTGGGTTCATGGGCTTACCCATTGGGTGTaGGCTCACTGCTTGGGAAGTGCAGGGGGTCCTGGGCACATTGCC +
Preference number: 1 (lower is better)
Translates to: QRSVINWVHGLTHWV*AHCLGSAGGPGHIA
Trigger: GGCAATGTGCCCAGGACCCCCTGCACTTCCCAAGCAGTGAGCGCACACCCAATGGGTAAGCCCATGAACCCAGTTTATGACACTGCGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR CCA 90 bp GCTCACTGCTTGGGAAGTGCAGGGGGTCCTGGGCACATTGCCAGCTaGGTGCTGAGCATTGAGTCACTGATCTCTTGTGATGGGGCCAAT +
Preference number: 1 (lower is better)
Translates to: AHCLGSAGGPGHIAS*VLSIESLISCDGAN
Trigger: ATTGGCCCCATCACAAGAGATCAGTGACTCAATGCTCAGCACCCAGCTGGCAATGTGCCCAGGACCCCCTGCACTTCCCAAGCAGTGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR TCA 90 bp CCTTACATCAGCTCTTCTCGCCCCATGGCTGAGGCCAGAGAGGAATaGTCTGCTCTTCAGGCAGCCTCTTCGCCACCTTTTCCTCAGCAA +
Preference number: 1 (lower is better)
Translates to: PYISSSRPMAEAREE*SALQAASSPPFPQQ
Trigger: TTGCTGAGGAAAAGGTGGCGAAGAGGCTGCCTGAAGAGCAGATCATTCCTCTCTGGCCTCAGCCATGGGGCGAGAAGAGCTGATGTAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR CCA 90 bp AGCAATGGGTTCCTCCAGAGCCTTACATCAGCTCTTCTCGCCCCATaGCTGAGGCCAGAGAGGAATGATCTGCTCTTCAGGCAGCCTCTT +
Preference number: 1 (lower is better)
Translates to: SNGFLQSLTSALLAP*LRPERNDLLFRQPL
Trigger: AAGAGGCTGCCTGAAGAGCAGATCATTCCTCTCTGGCCTCAGCCATGGGGCGAGAAGAGCTGATGTAAGGCTCTGGAGGAACCCATTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR TCA 90 bp GGCAGCCTCTTCGCCACCTTTTCCTCAGCAAACACACACCAACATTaGCATTTACAAAGATCAAGGGAGCTTGTGGCCCTGGGCTGCCTG +
Preference number: 1 (lower is better)
Translates to: GSLFATFSSANTHQH*HLQRSRELVALGCL
Trigger: CAGGCAGCCCAGGGCCACAAGCTCCCTTGATCTTTGTAAATGTCAATGTTGGTGTGTGTTTGCTGAGGAAAAGGTGGCGAAGAGGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR CCA 90 bp CCAACCCCTCTGCCACTTGGTTTAGAAATGAGCTCCCTGGCTCAGTaGGCCTTTCAGAATCTGGAACCAGACGGAGGTGGAGTTAAGAAG +
Preference number: 1 (lower is better)
Translates to: PTPLPLGLEMSSLAQ*AFQNLEPDGGGVKK
Trigger: CTTCTTAACTCCACCTCCGTCTGGTTCCAGATTCTGAAAGGCCCACTGAGCCAGGGAGCTCATTTCTAAACCAAGTGGCAGAGGGGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR CCA 90 bp TGTCTAGAATCTCTTTCATTAGCACATTCCAACCCCTCTGCCACTTaGTTTAGAAATGAGCTCCCTGGCTCAGTGGGCCTTTCAGAATCT +
Preference number: 1 (lower is better)
Translates to: CLESLSLAHSNPSAT*FRNELPGSVGLSES
Trigger: AGATTCTGAAAGGCCCACTGAGCCAGGGAGCTCATTTCTAAACCAAGTGGCAGAGGGGTTGGAATGTGCTAATGAAAGAGATTCTAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR TCA 90 bp GTGGCCCTGGGCTGCCTGAACCTGGCCACACAGGCTTGCGGCAGCAAGAGCCCAAACCGTGGCCTGGCCTaGGGAGGTAGTGCTCCACTC +
Preference number: 2 (lower is better)
Translates to: VALGCLNLATQACGSKSPNRGLA*GGSAPL
Trigger: GAGTGGAGCACTACCTCCTCAGGCCAGGCCACGGTT...TGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCAGGTTCAGGCAGCCCAGGGCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR GCA 90 bp GGCTGCCTGAACCTGGCCACACAGGCTTGCGGCAGCAAGAGCCCAGCCCATCTGGGAGCCAAGGTGGGCTaGCTGACACACTTGCCGCTC +
Preference number: 2 (lower is better)
Translates to: GCLNLATQACGSKSPAHLGAKVG*LTHLPL
Trigger: GAGCGGCAAGTGTGTCAGGCAGCCCACCTTGGCTCC...CAGATGGGCTGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCAGGTTCAGGCAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR GCA 90 bp CATCCCCAAAGGAGGCCAAAGGTCCATGGGCGGCAGCCATCTTTCCCCACCCCCCTGGCCACACAGGCTTaGGGCAGCAAGAGCCCAGCC +
Preference number: 2 (lower is better)
Translates to: HPQRRPKVHGRQPSFPTPLATQA*GSKSPA
Trigger: GGCTGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCAG...GGGGGTGGGGAAAGATGGCTGCCGCCCATGGACCTTTGGCCTCCTTTGGGGATG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR CCA 90 bp GGCTGCCTGAACCTGGCCACACAGGCTTGCGGCAGCAAGAGCCCAGCCCATCTGAGGTACCTGACGCGCTaGGCTCCTGGCTCCGTCAAG +
Preference number: 2 (lower is better)
Translates to: GCLNLATQACGSKSPAHLRYLTR*APGSVK
Trigger: CTTGACGGAGCCAGGAGCCCAGCGCGTCAGGTACCT...CAGATGGGCTGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCAGGTTCAGGCAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR CAA 90 bp GTGGCCTGGCCTGAGGAGGTAGTGCTCCACTCTCCCACGTCCAGCTaGGGCCCCCAGCCCTCACAGGCACCTCTTTGTTCTCCCTCCACA +
Preference number: 2 (lower is better)
Translates to: VAWPEEVVLHSPTSS*GPQPSQAPLCSPST
Trigger: TGTGGAGGGAGAACAAAGAGGTGCCTGTGAGGGCTGGGGGCCCAAGCTGGACGTGGGAGAGTGGAGCACTACCTCCTCAGGCCAGGCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR CCA 90 bp TCAAGGGAGCTTGTGGCCCTGGGCTGCCTGAACCTGGCCACACAGGCTTGCGGCCCCACCACGATGGCCTaGTCCCTCCAACATGCATGG +
Preference number: 2 (lower is better)
Translates to: SRELVALGCLNLATQACGPTTMA*SLQHAW
Trigger: CCATGCATGTTGGAGGGACCAGGCCATCGTGGTGGG...GCCGCAAGCCTGTGTGGCCAGGTTCAGGCAGCCCAGGGCCACAAGCTCCCTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR CAA 90 bp AAGGGAGCTTGTGGCCCTGGGCTGCCTGAACCTGGCCACACAGGCTaGCGGCAGCAAGAGCCCAGCCCATCTGTTTACAGGACGCTCAGC +
Preference number: 2 (lower is better)
Translates to: KGACGPGLPEPGHTG*RQQEPSPSVYRTLS
Trigger: GCTGAGCGTCCTGTAAACAGATGGGCTGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCAGGTTCAGGCAGCCCAGGGCCACAAGCTCCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR CCA 90 bp CCCTGGCCATCCCCAAAGGAGGCCAAAGGTCCATGGGCGGCAGCCATCTTTCCCAAGTGCAGGGGGTCCTaGGCACATTGCCAGCTGGGT +
Preference number: 2 (lower is better)
Translates to: PWPSPKEAKGPWAAAIFPKCRGS*AHCQLG
Trigger: ACCCAGCTGGCAATGTGCCCAGGACCCCCTGCACTT...GGGAAAGATGGCTGCCGCCCATGGACCTTTGGCCTCCTTTGGGGATGGCCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR TCA 90 bp CGGCAGCAAGAGCCCAGCCCATCTGTTTACAGGACGCTCAGCAGTTACTCCCAGAACCGTGGCCTGGCCTaGGGAGGTAGTGCTCCACTC +
Preference number: 2 (lower is better)
Translates to: RQQEPSPSVYRTLSSYSQNRGLA*GGSAPL
Trigger: GAGTGGAGCACTACCTCCTCAGGCCAGGCCACGGTT...CTGGGAGTAACTGCTGAGCGTCCTGTAAACAGATGGGCTGGGCTCTTGCTGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR GCA 90 bp CGGCAGCAAGAGCCCAGCCCATCTGTTTACAGGACGCTCAGCAGTTACTCCCAGGGAGCCAAGGTGGGCTaGCTGACACACTTGCCGCTC +
Preference number: 2 (lower is better)
Translates to: RQQEPSPSVYRTLSSYSQGAKVG*LTHLPL
Trigger: GAGCGGCAAGTGTGTCAGGCAGCCCACCTTGGCTCC...CTGGGAGTAACTGCTGAGCGTCCTGTAAACAGATGGGCTGGGCTCTTGCTGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR GCA 90 bp TGCCTGAACCTGGCCACACAGGCTTGCGGCAGCAAGAGCCCAGCCCATCTGTTTGGGTCCTGGGCACATTaGCAGCTGGGTGCTGAGCAT +
Preference number: 2 (lower is better)
Translates to: CLNLATQACGSKSPAHLFGSWAH*QLGAEH
Trigger: ATGCTCAGCACCCAGCTGGCAATGTGCCCAGGACCC...AAACAGATGGGCTGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCAGGTTCAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR TCA 90 bp GAGCAATGGGTTCCTCCAGAGCCTTACATCAGCTCTTCTCGCCCCATGGCTGAGCCAAGGTGGGCTGCCTaGCACACTTGCCGCTCTCGT +
Preference number: 2 (lower is better)
Translates to: EQWVPPEPYISSSRPMAEPRWAA*HTCRSR
Trigger: ACGAGAGCGGCAAGTGTGTCAGGCAGCCCACCTTGG...CTCAGCCATGGGGCGAGAAGAGCTGATGTAAGGCTCTGGAGGAACCCATTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR GCA 90 bp CTAGCCGGCATGAGCCACTTTTCTGGGAACTATCAGGGCCCTGGCCATCCCCAATGGGTGTGCGCTCACTaGTTGGGAAGTGCAGGGGGT +
Preference number: 2 (lower is better)
Translates to: LAGMSHFSGNYQGPGHPQWVCAH*LGSAGG
Trigger: ACCCCCTGCACTTCCCAAGCAGTGAGCGCACACCCA...TTGGGGATGGCCAGGGCCCTGATAGTTCCCAGAAAAGTGGCTCATGCCGGCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR CCA 90 bp TGGGTTCATGGGCTTACCCATTGGGTGTGCGCTCACTGCTTGGGAAGTGCAGGGTGTGCGCTCACTGCTTaGGAAGTGCAGGGGGTCCTG +
Preference number: 2 (lower is better)
Translates to: WVHGLTHWVCAHCLGSAGCALTA*EVQGVL
Trigger: CAGGACCCCCTGCACTTCCCAAGCAGTGAGCGCACA...CCCTGCACTTCCCAAGCAGTGAGCGCACACCCAATGGGTAAGCCCATGAACCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR CCA 90 bp TGGCCACACAGGCTTGCGGCAGCAAGAGCCCAGCCCATCTGTTTACAGGACGCTCCTTGCCAGCTGCTATaGGGCTTAGGCCATGCTCAG +
Preference number: 2 (lower is better)
Translates to: WPHRLAAARAQPICLQDAPCQLL*GLGHAQ
Trigger: CTGAGCATGGCCTAAGCCCCATAGCAGCTGGCAAGG...AGCGTCCTGTAAACAGATGGGCTGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR CAA 90 bp ATAAACTGGGTTCATGGGCTTACCCATTGGGTGTGCGCTCACTGCTaGGGAAGTGCAGGGGGTCCTGGGCACATTGCCAGCTGGGTGCTG +
Preference number: 2 (lower is better)
Translates to: INWVHGLTHWVCAHC*GSAGGPGHIASWVL
Trigger: CAGCACCCAGCTGGCAATGTGCCCAGGACCCCCTGCACTTCCCAAGCAGTGAGCGCACACCCAATGGGTAAGCCCATGAACCCAGTTTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR GCA 90 bp ACAAAGATCAAGGGAGCTTGTGGCCCTGGGCTGCCTGAACCTGGCCACACAGGCGTGAAAGGATTTGCTTaGCCAACCGTGGCCTGGCCT +
Preference number: 2 (lower is better)
Translates to: TKIKGACGPGLPEPGHTGVKGFA*PTVAWP
Trigger: AGGCCAGGCCACGGTTGGGCAAGCAAATCCTTTCAC...GCCTGTGTGGCCAGGTTCAGGCAGCCCAGGGCCACAAGCTCCCTTGATCTTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR CCA 90 bp ACAAAGATCAAGGGAGCTTGTGGCCCTGGGCTGCCTGAACCTGGCCACACAGGCGGGCCTTTCAGAATCTaGAACCAGACGGAGGTGGAG +
Preference number: 2 (lower is better)
Translates to: TKIKGACGPGLPEPGHTGGPFRI*NQTEVE
Trigger: CTCCACCTCCGTCTGGTTCCAGATTCTGAAAGGCCC...GCCTGTGTGGCCAGGTTCAGGCAGCCCAGGGCCACAAGCTCCCTTGATCTTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR CCA 90 bp TGGCCACACAGGCTTGCGGCAGCAAGAGCCCAGCCCATCTGTTTACAGGACGCTTCCTCAAAGGGGCCCTaGTTGTCACCTTCTCCCACA +
Preference number: 2 (lower is better)
Translates to: WPHRLAAARAQPICLQDASSKGP*LSPSPT
Trigger: TGTGGGAGAAGGTGACAACCAGGGCCCCTTTGAGGA...AGCGTCCTGTAAACAGATGGGCTGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR CCA 90 bp GAAGAGCAATGGGTTCCTCCAGAGCCTTACATCAGCTCTTCTCGCCCCATGGCTGACGCGCTGGGCTCCTaGCTCCGTCAAGCCCATCTA +
Preference number: 2 (lower is better)
Translates to: EEQWVPPEPYISSSRPMADALGS*LRQAHL
Trigger: TAGATGGGCTTGACGGAGCCAGGAGCCCAGCGCGTC...AGCCATGGGGCGAGAAGAGCTGATGTAAGGCTCTGGAGGAACCCATTGCTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR TCA 90 bp TGCCTGAACCTGGCCACACAGGCTTGCGGCAGCAAGAGCCCAGCCCATCTGTTTCTTGCCGCTCTCGTGTaGATCCAAGAAACTGCGTTC +
Preference number: 2 (lower is better)
Translates to: CLNLATQACGSKSPAHLFLAALV*IQETAF
Trigger: GAACGCAGTTTCTTGGATTCACACGAGAGCGGCAAG...AAACAGATGGGCTGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCAGGTTCAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR TCA 90 bp TGGCCACACAGGCTTGCGGCAGCAAGAGCCCAGCCCATCTGTTTACAGGACGCTCTTGCCGCTCTCGTGTaGATCCAAGAAACTGCGTTC +
Preference number: 2 (lower is better)
Translates to: WPHRLAAARAQPICLQDALAALV*IQETAF
Trigger: GAACGCAGTTTCTTGGATTCACACGAGAGCGGCAAG...AGCGTCCTGTAAACAGATGGGCTGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR GCA 90 bp AGGAAAGGGAAACTGGTGAAAGGATTTGCTTGCCCAACCGTGGCCTGGCCTGAGGGGTCCTGGGCACATTaGCAGCTGGGTGCTGAGCAT +
Preference number: 2 (lower is better)
Translates to: RKGKLVKGFACPTVAWPEGSWAH*QLGAEH
Trigger: ATGCTCAGCACCCAGCTGGCAATGTGCCCAGGACCC...CTCAGGCCAGGCCACGGTTGGGCAAGCAAATCCTTTCACCAGTTTCCCTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR CCA 90 bp CAGAGAGGAATGATCTGCTCTTCAGGCAGCCTCTTCGCCACCTTTTCCTCAGCAAGGTACCTGACGCGCTaGGCTCCTGGCTCCGTCAAG +
Preference number: 2 (lower is better)
Translates to: QRGMICSSGSLFATFSSARYLTR*APGSVK
Trigger: CTTGACGGAGCCAGGAGCCCAGCGCGTCAGGTACCT...TGCTGAGGAAAAGGTGGCGAAGAGGCTGCCTGAAGAGCAGATCATTCCTCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR GCA 90 bp TTTACAAAGATCAAGGGAGCTTGTGGCCCTGGGCTGCCTGAACCTGGCCACACATCACTGCTTGGGAAGTaGAGGGGGTCCTGGGCACAT +
Preference number: 2 (lower is better)
Translates to: FTKIKGACGPGLPEPGHTSLLGK*RGSWAH
Trigger: ATGTGCCCAGGACCCCCTGCACTTCCCAAGCAGTGA...TGTGTGGCCAGGTTCAGGCAGCCCAGGGCCACAAGCTCCCTTGATCTTTGTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR CCA 90 bp TTTACAAAGATCAAGGGAGCTTGTGGCCCTGGGCTGCCTGAACCTGGCCACACAGTGAGCTCCTTACTGTaGGAGAGCTGCAGGGAGCCA +
Preference number: 2 (lower is better)
Translates to: FTKIKGACGPGLPEPGHTVSSLL*ESCREP
Trigger: TGGCTCCCTGCAGCTCTCCCACAGTAAGGAGCTCAC...TGTGTGGCCAGGTTCAGGCAGCCCAGGGCCACAAGCTCCCTTGATCTTTGTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR CCA 90 bp CAGAGAGGAATGATCTGCTCTTCAGGCAGCCTCTTCGCCACCTTTTCCTCAGCACCCACCACGATGGCCTaGTCCCTCCAACATGCATGG +
Preference number: 2 (lower is better)
Translates to: QRGMICSSGSLFATFSSAPTTMA*SLQHAW
Trigger: CCATGCATGTTGGAGGGACCAGGCCATCGTGGTGGG...TGCTGAGGAAAAGGTGGCGAAGAGGCTGCCTGAAGAGCAGATCATTCCTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR GCA 90 bp CAGAGAGGAATGATCTGCTCTTCAGGCAGCCTCTTCGCCACCTTTTCCTCAGCATTACTGTGGGAGAGCTaGAGGGAGCCAAGGTGGGCT +
Preference number: 2 (lower is better)
Translates to: QRGMICSSGSLFATFSSALLWES*REPRWA
Trigger: AGCCCACCTTGGCTCCCTGCAGCTCTCCCACAGTAA...TGCTGAGGAAAAGGTGGCGAAGAGGCTGCCTGAAGAGCAGATCATTCCTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR GCA 90 bp TGGCCACACAGGCTTGCGGCAGCAAGAGCCCAGCCCATCTGTTTACAGGACGCTTCCCAGGAAAATCCCTaGACTTCAGGAAAGGGAAAC +
Preference number: 2 (lower is better)
Translates to: WPHRLAAARAQPICLQDASQENP*TSGKGN
Trigger: GTTTCCCTTTCCTGAAGTGCAGGGATTTTCCTGGGA...AGCGTCCTGTAAACAGATGGGCTGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR CCA 90 bp TTCATGACAGCTGTGAGCTCCTTACTGTGGGAGAGCTGCAGGGAGCCAAGGTGGAGCTCCCTGGCTCAGTaGGCCTTTCAGAATCTGGAA +
Preference number: 2 (lower is better)
Translates to: FMTAVSSLLWESCREPRWSSLAQ*AFQNLE
Trigger: TTCCAGATTCTGAAAGGCCCACTGAGCCAGGGAGCT...CCACCTTGGCTCCCTGCAGCTCTCCCACAGTAAGGAGCTCACAGCTGTCATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR CCA 90 bp GAGCAATGGGTTCCTCCAGAGCCTTACATCAGCTCTTCTCGCCCCATGGCTGAGAGCTCCCTGGCTCAGTaGGCCTTTCAGAATCTGGAA +
Preference number: 2 (lower is better)
Translates to: EQWVPPEPYISSSRPMAESSLAQ*AFQNLE
Trigger: TTCCAGATTCTGAAAGGCCCACTGAGCCAGGGAGCT...CTCAGCCATGGGGCGAGAAGAGCTGATGTAAGGCTCTGGAGGAACCCATTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR CCA 90 bp ATGGGCTTACCCATTGGGTGTGCGCTCACTGCTTGGGAAGTGCAGGGGGTCCTGAACCCCTCTGCCACTTaGTTTAGAAATGAGCTCCCT +
Preference number: 2 (lower is better)
Translates to: MGLPIGCALTAWEVQGVLNPSAT*FRNELP
Trigger: AGGGAGCTCATTTCTAAACCAAGTGGCAGAGGGGTT...CAGGACCCCCTGCACTTCCCAAGCAGTGAGCGCACACCCAATGGGTAAGCCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR CCA 90 bp CAGAGAGGAATGATCTGCTCTTCAGGCAGCCTCTTCGCCACCTTTTCCTCAGCAGTGAGCTCCTTACTGTaGGAGAGCTGCAGGGAGCCA +
Preference number: 2 (lower is better)
Translates to: QRGMICSSGSLFATFSSAVSSLL*ESCREP
Trigger: TGGCTCCCTGCAGCTCTCCCACAGTAAGGAGCTCAC...TGCTGAGGAAAAGGTGGCGAAGAGGCTGCCTGAAGAGCAGATCATTCCTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR CCA 90 bp GAGCCCAGCCCATCTGTTTACAGGACGCTCAGCAGTTACTCCCAGGAAAATCCCGGGCACATTGCCAGCTaGGTGCTGAGCATTGAGTCA +
Preference number: 2 (lower is better)
Translates to: EPSPSVYRTLSSYSQENPGHIAS*VLSIES
Trigger: TGACTCAATGCTCAGCACCCAGCTGGCAATGTGCCC...GGGATTTTCCTGGGAGTAACTGCTGAGCGTCCTGTAAACAGATGGGCTGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR CCA 90 bp TTTACAAAGATCAAGGGAGCTTGTGGCCCTGGGCTGCCTGAACCTGGCCACACACATGGGCTTACCCATTaGGTGTGCGCTCACTGCTTG +
Preference number: 2 (lower is better)
Translates to: FTKIKGACGPGLPEPGHTHGLTH*VCAHCL
Trigger: CAAGCAGTGAGCGCACACCCAATGGGTAAGCCCATG...TGTGTGGCCAGGTTCAGGCAGCCCAGGGCCACAAGCTCCCTTGATCTTTGTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR TCA 90 bp CGGCAGCAAGAGCCCAGCCCATCTGTTTACAGGACGCTCAGCAGTTACTCCCAGGGAAAGGGAAACTGGTaGAAGGATTTGCTTGCCCAA +
Preference number: 2 (lower is better)
Translates to: RQQEPSPSVYRTLSSYSQGKGNW*KDLLAQ
Trigger: TTGGGCAAGCAAATCCTTTCACCAGTTTCCCTTTCC...CTGGGAGTAACTGCTGAGCGTCCTGTAAACAGATGGGCTGGGCTCTTGCTGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR CCA 90 bp CAGAGAGGAATGATCTGCTCTTCAGGCAGCCTCTTCGCCACCTTTTCCTCAGCAGGGCCTTTCAGAATCTaGAACCAGACGGAGGTGGAG +
Preference number: 2 (lower is better)
Translates to: QRGMICSSGSLFATFSSAGPFRI*NQTEVE
Trigger: CTCCACCTCCGTCTGGTTCCAGATTCTGAAAGGCCC...TGCTGAGGAAAAGGTGGCGAAGAGGCTGCCTGAAGAGCAGATCATTCCTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR CCA 90 bp GTAAAACCCAATCCTAGCCGGCATGAGCCACTTTTCTGGGAACTATCAGGGCCCTCCTCAAAGGGGCCCTaGTTGTCACCTTCTCCCACA +
Preference number: 2 (lower is better)
Translates to: VKPNPSRHEPLFWELSGPSSKGP*LSPSPT
Trigger: TGTGGGAGAAGGTGACAACCAGGGCCCCTTTGAGGA...GGGCCCTGATAGTTCCCAGAAAAGTGGCTCATGCCGGCTAGGATTGGGTTTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR CAA 90 bp GGGGCCCTGGTTGTCACCTTCTCCCACAGCCATTTCCACCCATCGTaGTCTAGAATCTCTTTCATTAGCACATTCCAACCCCTCTGCCAC +
Preference number: 2 (lower is better)
Translates to: GALVVTFSHSHFHPS*SRISFISTFQPLCH
Trigger: GTGGCAGAGGGGTTGGAATGTGCTAATGAAAGAGATTCTAGACAACGATGGGTGGAAATGGCTGTGGGAGAAGGTGACAACCAGGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR TCA 90 bp TGCCTGAACCTGGCCACACAGGCTTGCGGCAGCAAGAGCCCAGCCCATCTGTTTGCAGGCCAAGTTCACTaGAGCTTAAGAAAATCATGT +
Preference number: 2 (lower is better)
Translates to: CLNLATQACGSKSPAHLFAGQVH*SLRKSC
Trigger: ACATGATTTTCTTAAGCTTCAGTGAACTTGGCCTGC...AAACAGATGGGCTGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCAGGTTCAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR GCA 90 bp CAAATGGGGAAGAGCAATGGGTTCCTCCAGAGCCTTACATCAGCTCTTCTCGCCCTTACCCATTGGGTGTaGGCTCACTGCTTGGGAAGT +
Preference number: 2 (lower is better)
Translates to: QMGKSNGFLQSLTSALLALTHWV*AHCLGS
Trigger: ACTTCCCAAGCAGTGAGCGCACACCCAATGGGTAAG...GGCGAGAAGAGCTGATGTAAGGCTCTGGAGGAACCCATTGCTCTTCCCCATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR CCA 90 bp CTAGCCGGCATGAGCCACTTTTCTGGGAACTATCAGGGCCCTGGCCATCCCCAAAGTCAATTGAATTCATaGGCCAAACAGGTCCCATCC +
Preference number: 2 (lower is better)
Translates to: LAGMSHFSGNYQGPGHPQSQLNS*AKQVPS
Trigger: GGATGGGACCTGTTTGGCCCATGAATTCAATTGACT...TTGGGGATGGCCAGGGCCCTGATAGTTCCCAGAAAAGTGGCTCATGCCGGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR CAA 90 bp AGGCAGCCTCTTCGCCACCTTTTCCTCAGCAAACACACACCAACATaGACATTTACAAAGATCAAGGGAGCTTGTGGCCCTGGGCTGCCT +
Preference number: 2 (lower is better)
Translates to: RQPLRHLFLSKHTPT*TFTKIKGACGPGLP
Trigger: AGGCAGCCCAGGGCCACAAGCTCCCTTGATCTTTGTAAATGTCAATGTTGGTGTGTGTTTGCTGAGGAAAAGGTGGCGAAGAGGCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR GCA 90 bp CAGAGAGGAATGATCTGCTCTTCAGGCAGCCTCTTCGCCACCTTTTCCTCAGCAGTGAATCCAAGAAACTaGGTTCCTCAAAGGGGCCCT +
Preference number: 2 (lower is better)
Translates to: QRGMICSSGSLFATFSSAVNPRN*VPQRGP
Trigger: AGGGCCCCTTTGAGGAACGCAGTTTCTTGGATTCAC...TGCTGAGGAAAAGGTGGCGAAGAGGCTGCCTGAAGAGCAGATCATTCCTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR CCA 90 bp GAGCCCAGCCCATCTGTTTACAGGACGCTCAGCAGTTACTCCCAGGAAAATCCCCATAAACTGGGTTCATaGGCTTACCCATTGGGTGTG +
Preference number: 2 (lower is better)
Translates to: EPSPSVYRTLSSYSQENPHKLGS*AYPLGV
Trigger: CACACCCAATGGGTAAGCCCATGAACCCAGTTTATG...GGGATTTTCCTGGGAGTAACTGCTGAGCGTCCTGTAAACAGATGGGCTGGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR CCA 90 bp CAGAGAGGAATGATCTGCTCTTCAGGCAGCCTCTTCGCCACCTTTTCCTCAGCAAGTCAATTGAATTCATaGGCCAAACAGGTCCCATCC +
Preference number: 2 (lower is better)
Translates to: QRGMICSSGSLFATFSSASQLNS*AKQVPS
Trigger: GGATGGGACCTGTTTGGCCCATGAATTCAATTGACT...TGCTGAGGAAAAGGTGGCGAAGAGGCTGCCTGAAGAGCAGATCATTCCTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR GCA 90 bp TCAATTGAATTCATGGGCCAAACAGGTCCCATCCTCTTCATGACAGCTGTGAGCGTGAATCCAAGAAACTaGGTTCCTCAAAGGGGCCCT +
Preference number: 2 (lower is better)
Translates to: SIEFMGQTGPILFMTAVSVNPRN*VPQRGP
Trigger: AGGGCCCCTTTGAGGAACGCAGTTTCTTGGATTCAC...GCTCACAGCTGTCATGAAGAGGATGGGACCTGTTTGGCCCATGAATTCAATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR TCA 90 bp CATTTCCACCCATCGTTGTCTAGAATCTCTTTCATTAGCACATTCCAACCCCTCGCAGGCCAAGTTCACTaGAGCTTAAGAAAATCATGT +
Preference number: 2 (lower is better)
Translates to: HFHPSLSRISFISTFQPLAGQVH*SLRKSC
Trigger: ACATGATTTTCTTAAGCTTCAGTGAACTTGGCCTGC...GAGGGGTTGGAATGTGCTAATGAAAGAGATTCTAGACAACGATGGGTGGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR GCA 72 bp GTGGCCCTGGGCTGCCTGAACCTGGCCACACAGGCTTaGGGCAGCAAGAGCCCAGCCCATCTGTTTACAGGA +
Preference number: 3 (lower is better)
Translates to: VALGCLNLATQA*GSKSPAHLFTG
Trigger: TCCTGTAAACAGATGGGCTGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCAGGTTCAGGCAGCCCAGGGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR GCA 72 bp GCTTACCCATTGGGTGTGCGCTCACTGCTTGGGAAGTaGAGGGGGTCCTGGGCACATTGCCAGCTGGGTGCT +
Preference number: 3 (lower is better)
Translates to: AYPLGVRSLLGK*RGSWAHCQLGA
Trigger: AGCACCCAGCTGGCAATGTGCCCAGGACCCCCTGCACTTCCCAAGCAGTGAGCGCACACCCAATGGGTAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR CAA 90 bp ATGGGCTTACCCATTGGGTGTGCGCTCACTGCTTGGGAAGTGCAGGGGGTCCTGGGCTGCCTGACACACTaGCCGCTCTCGTGTGAATCC +
Preference number: 3 (lower is better)
Translates to: MGLPIGCALTAWEVQGVLGCLTH*PLSCES
Trigger: GGATTCACACGAGAGCGGCAAGTGTGTCAGGCAGCC...CAGGACCCCCTGCACTTCCCAAGCAGTGAGCGCACACCCAATGGGTAAGCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR GCA 72 bp TGGGTTCATGGGCTTACCCATTGGGTGTGCGCTCACTaGTTGGGAAGTGCAGGGGGTCCTGGGCACATTGCC +
Preference number: 3 (lower is better)
Translates to: WVHGLTHWVCAH*LGSAGGPGHIA
Trigger: GGCAATGTGCCCAGGACCCCCTGCACTTCCCAAGCAGTGAGCGCACACCCAATGGGTAAGCCCATGAACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR CCA 72 bp CGGCATGAGCCACTTTTCTGGGAACTATCAGGGCCCTaGCCATCCCCAAAGGAGGCCAAAGGTCCATGGGCG +
Preference number: 3 (lower is better)
Translates to: RHEPLFWELSGP*PSPKEAKGPWA
Trigger: CGCCCATGGACCTTTGGCCTCCTTTGGGGATGGCCAGGGCCCTGATAGTTCCCAGAAAAGTGGCTCATGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR TCA 72 bp GGTGAAAGGATTTGCTTGCCCAACCGTGGCCTGGCCTaGGGAGGTAGTGCTCCACTCTCCCACGTCCAGCTT +
Preference number: 3 (lower is better)
Translates to: GERICLPNRGLA*GGSAPLSHVQL
Trigger: AAGCTGGACGTGGGAGAGTGGAGCACTACCTCCTCAGGCCAGGCCACGGTTGGGCAAGCAAATCCTTTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR CAA 90 bp TGCCTGAACCTGGCCACACAGGCTTGCGGCAGCAAGAGCCCAGCCCATCTGTTTTCATGGGCTTACCCATaGGGTGTGCGCTCACTGCTT +
Preference number: 3 (lower is better)
Translates to: CLNLATQACGSKSPAHLFSWAYP*GVRSLL
Trigger: AAGCAGTGAGCGCACACCCAATGGGTAAGCCCATGA...AAACAGATGGGCTGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCAGGTTCAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR CAA 90 bp ACATTTACAAAGATCAAGGGAGCTTGTGGCCCTGGGCTGCCTGAACCTGGCCACGGCTGCCTGACACACTaGCCGCTCTCGTGTGAATCC +
Preference number: 3 (lower is better)
Translates to: TFTKIKGACGPGLPEPGHGCLTH*PLSCES
Trigger: GGATTCACACGAGAGCGGCAAGTGTGTCAGGCAGCC...GTGGCCAGGTTCAGGCAGCCCAGGGCCACAAGCTCCCTTGATCTTTGTAAATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR TCA 72 bp CAAGGTGGGCTGCCTGACACACTTGCCGCTCTCGTGTaGATCCAAGAAACTGCGTTCCTCAAAGGGGCCCTG +
Preference number: 3 (lower is better)
Translates to: QGGLPDTLAALV*IQETAFLKGAL
Trigger: CAGGGCCCCTTTGAGGAACGCAGTTTCTTGGATTCACACGAGAGCGGCAAGTGTGTCAGGCAGCCCACCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR CCA 72 bp AAACTGGTGAAAGGATTTGCTTGCCCAACCGTGGCCTaGCCTGAGGAGGTAGTGCTCCACTCTCCCACGTCC +
Preference number: 3 (lower is better)
Translates to: KLVKGFACPTVA*PEEVVLHSPTS
Trigger: GGACGTGGGAGAGTGGAGCACTACCTCCTCAGGCCAGGCCACGGTTGGGCAAGCAAATCCTTTCACCAGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR CCA 72 bp CGCAGTGTCATAAACTGGGTTCATGGGCTTACCCATTaGGTGTGCGCTCACTGCTTGGGAAGTGCAGGGGGT +
Preference number: 3 (lower is better)
Translates to: RSVINWVHGLTH*VCAHCLGSAGG
Trigger: ACCCCCTGCACTTCCCAAGCAGTGAGCGCACACCCAATGGGTAAGCCCATGAACCCAGTTTATGACACTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR CAA 90 bp ACCTGGCCACACAGGCTTGCGGCAGCAAGAGCCCAGCCCATCTGTTTACAGGACGGGCCAATGAGTCAATaGAATTCATGGGCCAAACAG +
Preference number: 3 (lower is better)
Translates to: TWPHRLAAARAQPICLQDGPMSQ*NSWAKQ
Trigger: CTGTTTGGCCCATGAATTCAATTGACTCATTGGCCC...GTCCTGTAAACAGATGGGCTGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR CCA 72 bp TTGGGAAGTGCAGGGGGTCCTGGGCACATTGCCAGCTaGGTGCTGAGCATTGAGTCACTGATCTCTTGTGAT +
Preference number: 3 (lower is better)
Translates to: LGSAGGPGHIAS*VLSIESLISCD
Trigger: ATCACAAGAGATCAGTGACTCAATGCTCAGCACCCAGCTGGCAATGTGCCCAGGACCCCCTGCACTTCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR CAA 90 bp CAAATGGGGAAGAGCAATGGGTTCCTCCAGAGCCTTACATCAGCTCTTCTCGCCTCATGGGCTTACCCATaGGGTGTGCGCTCACTGCTT +
Preference number: 3 (lower is better)
Translates to: QMGKSNGFLQSLTSALLASWAYP*GVRSLL
Trigger: AAGCAGTGAGCGCACACCCAATGGGTAAGCCCATGA...GGCGAGAAGAGCTGATGTAAGGCTCTGGAGGAACCCATTGCTCTTCCCCATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR CCA 72 bp TGTGAATCCAAGAAACTGCGTTCCTCAAAGGGGCCCTaGTTGTCACCTTCTCCCACAGCCATTTCCACCCAT +
Preference number: 3 (lower is better)
Translates to: CESKKLRSSKGP*LSPSPTAISTH
Trigger: ATGGGTGGAAATGGCTGTGGGAGAAGGTGACAACCAGGGCCCCTTTGAGGAACGCAGTTTCTTGGATTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR CAA 90 bp ACATTTACAAAGATCAAGGGAGCTTGTGGCCCTGGGCTGCCTGAACCTGGCCACGGGCCAATGAGTCAATaGAATTCATGGGCCAAACAG +
Preference number: 3 (lower is better)
Translates to: TFTKIKGACGPGLPEPGHGPMSQ*NSWAKQ
Trigger: CTGTTTGGCCCATGAATTCAATTGACTCATTGGCCC...GTGGCCAGGTTCAGGCAGCCCAGGGCCACAAGCTCCCTTGATCTTTGTAAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR-3UTR CAA 90 bp CAGAGAGGAATGATCTGCTCTTCAGGCAGCCTCTTCGCCACCTTTTCCTCAGCACATTTCCACCCATCGTaGTCTAGAATCTCTTTCATT +
Preference number: 3 (lower is better)
Translates to: QRGMICSSGSLFATFSSAHFHPS*SRISFI
Trigger: AATGAAAGAGATTCTAGACAACGATGGGTGGAAATG...TGCTGAGGAAAAGGTGGCGAAGAGGCTGCCTGAAGAGCAGATCATTCCTCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR TCA 90 bp TCAAGGGAGCTTGTGGCCCTGGGCTGCCTGAACCTGGCCACACAGGCTTGCGGCTGGCCCTGGGCTGCCTaGACCTGGCCACACAGGCTT +
Preference number: 4 (lower is better)
Translates to: SRELVALGCLNLATQACGWPWAA*TWPHRL
Trigger: AAGCCTGTGTGGCCAGGTTCAGGCAGCCCAGGGCCA...GCCGCAAGCCTGTGTGGCCAGGTTCAGGCAGCCCAGGGCCACAAGCTCCCTTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp GTGGCCCTGGGCTGCCTGAACCTGGCCACACAGGCTTGCGGCAGCAAGAGCCCACCACCATCTCCTCTGTaGCAGGGGGCAAGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: VALGCLNLATQACGSKSPPPSPL*QGARGS
Trigger: GGAGCCTCTTGCCCCCTGCCACAGAGGAGATGGTGG...TGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCAGGTTCAGGCAGCCCAGGGCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp GGCTGCCTGAACCTGGCCACACAGGCTTGCGGCAGCAAGAGCCCAGCCCATCTGGACGCGCTGGGCTCCTaGCTCCGTCAAGCCCATCTA +
Preference number: 4 (lower is better)
Translates to: GCLNLATQACGSKSPAHLDALGS*LRQAHL
Trigger: TAGATGGGCTTGACGGAGCCAGGAGCCCAGCGCGTC...CAGATGGGCTGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCAGGTTCAGGCAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp ACCTGGCCACACAGGCTTGCGGCAGCAAGAGCCCAGCCCATCTGTTTACAGGACCCGGCCAGAGCAGGCTaGGCAGCACCACCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: TWPHRLAAARAQPICLQDPARAG*AAPPGH
Trigger: ATGCCCTGGTGGTGCTGCGCAGCCTGCTCTGGCCGG...GTCCTGTAAACAGATGGGCTGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp GTGGCCCTGGGCTGCCTGAACCTGGCCACACAGGCTTGCGGCAGCAAGAGCCCAGTGAGCTCCTTACTGTaGGAGAGCTGCAGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: VALGCLNLATQACGSKSPVSSLL*ESCREP
Trigger: TGGCTCCCTGCAGCTCTCCCACAGTAAGGAGCTCAC...TGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCAGGTTCAGGCAGCCCAGGGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp GGCTGCCTGAACCTGGCCACACAGGCTTGCGGCAGCAAGAGCCCAGCCCATCTGCCCACCACGATGGCCTaGTCCCTCCAACATGCATGG +
Preference number: 4 (lower is better)
Translates to: GCLNLATQACGSKSPAHLPTTMA*SLQHAW
Trigger: CCATGCATGTTGGAGGGACCAGGCCATCGTGGTGGG...CAGATGGGCTGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCAGGTTCAGGCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR CAA 72 bp TGTGGCCCTGGGCTGCCTGAACCTGGCCACACAGGCTaGCGGCAGCAAGAGCCCAGCCCATCTGTTTACAGG +
Preference number: 4 (lower is better)
Translates to: CGPGLPEPGHTG*RQQEPSPSVYR
Trigger: CCTGTAAACAGATGGGCTGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCAGGTTCAGGCAGCCCAGGGCCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp AGGAAAGGGAAACTGGTGAAAGGATTTGCTTGCCCAACCGTGGCCTGGCCTGAGTCCGGGCTGAGGCCCTaGCCACTGCCGGACGCCAGC +
Preference number: 4 (lower is better)
Translates to: RKGKLVKGFACPTVAWPESGLRP*PLPDAS
Trigger: GCTGGCGTCCGGCAGTGGGCAGGGCCTCAGCCCGGA...CTCAGGCCAGGCCACGGTTGGGCAAGCAAATCCTTTCACCAGTTTCCCTTTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp CATCCCCAAAGGAGGCCAAAGGTCCATGGGCGGCAGCCATCTTTCCCCACCCCCTGGGTGTGCGCTCACTaGTTGGGAAGTGCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: HPQRRPKVHGRQPSFPTPWVCAH*LGSAGG
Trigger: ACCCCCTGCACTTCCCAAGCAGTGAGCGCACACCCA...GGGGGTGGGGAAAGATGGCTGCCGCCCATGGACCTTTGGCCTCCTTTGGGGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp GTGGCCCTGGGCTGCCTGAACCTGGCCACACAGGCTTGCGGCAGCAAGAGCCCAGTGAAAGGATTTGCTTaGCCAACCGTGGCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: VALGCLNLATQACGSKSPVKGFA*PTVAWP
Trigger: AGGCCAGGCCACGGTTGGGCAAGCAAATCCTTTCAC...TGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCAGGTTCAGGCAGCCCAGGGCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp TGGCCACACAGGCTTGCGGCAGCAAGAGCCCAGCCCATCTGTTTACAGGACGCTCTGGCCACACAGGCTTaGGGCAGCAAGAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: WPHRLAAARAQPICLQDALATQA*GSKSPA
Trigger: GGCTGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCAG...AGCGTCCTGTAAACAGATGGGCTGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp TCAAGGGAGCTTGTGGCCCTGGGCTGCCTGAACCTGGCCACACAGGCTTGCGGCGCTCTTCTCGCCCCATaGCTGAGGCCAGAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: SRELVALGCLNLATQACGALLAP*LRPERN
Trigger: ATTCCTCTCTGGCCTCAGCCATGGGGCGAGAAGAGC...GCCGCAAGCCTGTGTGGCCAGGTTCAGGCAGCCCAGGGCCACAAGCTCCCTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp CATCCCCAAAGGAGGCCAAAGGTCCATGGGCGGCAGCCATCTTTCCCCACCCCCGAACTATCAGGGCCCTaGCCATCCCCAAAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: HPQRRPKVHGRQPSFPTPELSGP*PSPKEA
Trigger: GGCCTCCTTTGGGGATGGCCAGGGCCCTGATAGTTC...GGGGGTGGGGAAAGATGGCTGCCGCCCATGGACCTTTGGCCTCCTTTGGGGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR TCA 90 bp GGCTGCCTGAACCTGGCCACACAGGCTTGCGGCAGCAAGAGCCCAGCCCATCTGGTTGGGGTAGCTGAGTaGGCCAAATGGGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: GCLNLATQACGSKSPAHLVGVAE*AKWGRA
Trigger: TGCTCTTCCCCATTTGGCTCACTCAGCTACCCCAAC...CAGATGGGCTGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCAGGTTCAGGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp CAGAGAGGAATGATCTGCTCTTCAGGCAGCCTCTTCGCCACCTTTTCCTCAGCATCCGGGCTGAGGCCCTaGCCACTGCCGGACGCCAGC +
Preference number: 4 (lower is better)
Translates to: QRGMICSSGSLFATFSSASGLRP*PLPDAS
Trigger: GCTGGCGTCCGGCAGTGGGCAGGGCCTCAGCCCGGA...TGCTGAGGAAAAGGTGGCGAAGAGGCTGCCTGAAGAGCAGATCATTCCTCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp TGGCCACACAGGCTTGCGGCAGCAAGAGCCCAGCCCATCTGTTTACAGGACGCTGAGCGTCTTGCGCGGTaGGAGCTGGTCCTCACTCAG +
Preference number: 4 (lower is better)
Translates to: WPHRLAAARAQPICLQDAERLAR*ELVLTQ
Trigger: CTGAGTGAGGACCAGCTCGCACCGCGCAAGACGCTC...AGCGTCCTGTAAACAGATGGGCTGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp TGCCTGAACCTGGCCACACAGGCTTGCGGCAGCAAGAGCCCAGCCCATCTGTTTGGAGCCAAGGTGGGCTaGCTGACACACTTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: CLNLATQACGSKSPAHLFGAKVG*LTHLPL
Trigger: GAGCGGCAAGTGTGTCAGGCAGCCCACCTTGGCTCC...AAACAGATGGGCTGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCAGGTTCAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp ATGGGCTTACCCATTGGGTGTGCGCTCACTGCTTGGGAAGTGCAGGGGGTCCTGCTTGTGGCCCTGGGCTaGCTGAACCTGGCCACACAG +
Preference number: 4 (lower is better)
Translates to: MGLPIGCALTAWEVQGVLLVALG*LNLATQ
Trigger: CTGTGTGGCCAGGTTCAGGCAGCCCAGGGCCACAAG...CAGGACCCCCTGCACTTCCCAAGCAGTGAGCGCACACCCAATGGGTAAGCCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp CTGGTGAAAGGATTTGCTTGCCCAACCGTGGCCTGGCCTGAGGAGGTAGTGCTCTTGCGCGGTGCGAGCTaGTCCTCACTCAGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: LVKGFACPTVAWPEEVVLLRGAS*SSLRPC
Trigger: GCAGGGCCTGAGTGAGGACCAGCTCGCACCGCGCAA...GAGCACTACCTCCTCAGGCCAGGCCACGGTTGGGCAAGCAAATCCTTTCACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp GTGGCCCTGGGCTGCCTGAACCTGGCCACACAGGCTTGCGGCAGCAAGAGCCCACGTAGCCATAGTTCTTaGTGCGGGGAGCATGGTAGA +
Preference number: 4 (lower is better)
Translates to: VALGCLNLATQACGSKSPRSHSS*CGEHGR
Trigger: TCTACCATGCTCCCCGCACCAAGAACTATGGCTACG...TGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCAGGTTCAGGCAGCCCAGGGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp CCCTGGCCATCCCCAAAGGAGGCCAAAGGTCCATGGGCGGCAGCCATCTTTCCCGTGAGCTCCTTACTGTaGGAGAGCTGCAGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: PWPSPKEAKGPWAAAIFPVSSLL*ESCREP
Trigger: TGGCTCCCTGCAGCTCTCCCACAGTAAGGAGCTCAC...GGGAAAGATGGCTGCCGCCCATGGACCTTTGGCCTCCTTTGGGGATGGCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp CCCTGGCCATCCCCAAAGGAGGCCAAAGGTCCATGGGCGGCAGCCATCTTTCCCCCTTGCCAGCTGCTATaGGGCTTAGGCCATGCTCAG +
Preference number: 4 (lower is better)
Translates to: PWPSPKEAKGPWAAAIFPPCQLL*GLGHAQ
Trigger: CTGAGCATGGCCTAAGCCCCATAGCAGCTGGCAAGG...GGGAAAGATGGCTGCCGCCCATGGACCTTTGGCCTCCTTTGGGGATGGCCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR TCA 90 bp GTGGCCCTGGGCTGCCTGAACCTGGCCACACAGGCTTGCGGCAGCAAGAGCCCAAATGGAAGTAGGAGCTaGGCTTCTTGGCCTCAGACA +
Preference number: 4 (lower is better)
Translates to: VALGCLNLATQACGSKSPNGSRS*ASWPQT
Trigger: TGTCTGAGGCCAAGAAGCTCAGCTCCTACTTCCATT...TGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCAGGTTCAGGCAGCCCAGGGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR TCA 90 bp CTGGTGAAAGGATTTGCTTGCCCAACCGTGGCCTGGCCTGAGGAGGTAGTGCTCCCAAGGTGGGCTGCCTaGCACACTTGCCGCTCTCGT +
Preference number: 4 (lower is better)
Translates to: LVKGFACPTVAWPEEVVLPRWAA*HTCRSR
Trigger: ACGAGAGCGGCAAGTGTGTCAGGCAGCCCACCTTGG...GAGCACTACCTCCTCAGGCCAGGCCACGGTTGGGCAAGCAAATCCTTTCACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp GAAGAGCAATGGGTTCCTCCAGAGCCTTACATCAGCTCTTCTCGCCCCATGGCTCCGGCCAGAGCAGGCTaGGCAGCACCACCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: EEQWVPPEPYISSSRPMAPARAG*AAPPGH
Trigger: ATGCCCTGGTGGTGCTGCGCAGCCTGCTCTGGCCGG...AGCCATGGGGCGAGAAGAGCTGATGTAAGGCTCTGGAGGAACCCATTGCTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp GGCTGCCTGAACCTGGCCACACAGGCTTGCGGCAGCAAGAGCCCAGCCCATCTGTGTTCTTCTCGCCAGTaGCCACGTAGACGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: GCLNLATQACGSKSPAHLCSSRQ*PRRRSH
Trigger: ATGGCTACGTCTACGTGGGCACTGGCGAGAAGAACA...CAGATGGGCTGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCAGGTTCAGGCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp CAGGGAGCCAAGGTGGGCTGCCTGACACACTTGCCGCTCTCGTGTGAATCCAAGGGGTCCTGGGCACATTaGCAGCTGGGTGCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: QGAKVGCLTHLPLSCESKGSWAH*QLGAEH
Trigger: ATGCTCAGCACCCAGCTGGCAATGTGCCCAGGACCC...CTTGGATTCACACGAGAGCGGCAAGTGTGTCAGGCAGCCCACCTTGGCTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp ATGGGCTTACCCATTGGGTGTGCGCTCACTGCTTGGGAAGTGCAGGGGGTCCTGGCTCCAGGACCCTCATaGACACAGAGCAGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: MGLPIGCALTAWEVQGVLAPGPS*TQSRSP
Trigger: GGGACTCCTGCTCTGTGTCCATGAGGGTCCTGGAGC...CAGGACCCCCTGCACTTCCCAAGCAGTGAGCGCACACCCAATGGGTAAGCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372165.8
CDS-3UTR CCA 90 bp TGGCCACACAGGCTTGCGGCAGCAAGAGCCCAGCCCATCTGTTTACAGGACGCTAAGTGCAGGGGGTCCTaGGCACATTGCCAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: WPHRLAAARAQPICLQDAKCRGS*AHCQLG
Trigger: ACCCAGCTGGCAATGTGCCCAGGACCCCCTGCACTT...AGCGTCCTGTAAACAGATGGGCTGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp TGGGTTCATGGGCTTACCCATTGGGTGTGCGCTCACTGCTTGGGAAGTGCAGGGTGCCCAACCGTGGCCTaGCCTGAGGAGGTAGTGCTC +
Preference number: 4 (lower is better)
Translates to: WVHGLTHWVCAHCLGSAGCPTVA*PEEVVL
Trigger: GAGCACTACCTCCTCAGGCCAGGCCACGGTTGGGCA...CCCTGCACTTCCCAAGCAGTGAGCGCACACCCAATGGGTAAGCCCATGAACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp ACAAAGATCAAGGGAGCTTGTGGCCCTGGGCTGCCTGAACCTGGCCACACAGGCGAACTATCAGGGCCCTaGCCATCCCCAAAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: TKIKGACGPGLPEPGHTGELSGP*PSPKEA
Trigger: GGCCTCCTTTGGGGATGGCCAGGGCCCTGATAGTTC...GCCTGTGTGGCCAGGTTCAGGCAGCCCAGGGCCACAAGCTCCCTTGATCTTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR TCA 90 bp GAGCCCAGCCCATCTGTTTACAGGACGCTCAGCAGTTACTCCCAGGAAAATCCCGGGCGCCTCGGGGGATaGTGGCCACAGCCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: EPSPSVYRTLSSYSQENPGRLGG*WPQPCQ
Trigger: TTGACAAGGCTGTGGCCATCATCCCCCGAGGCGCCC...GGGATTTTCCTGGGAGTAACTGCTGAGCGTCCTGTAAACAGATGGGCTGGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR TCA 90 bp TCCCTGGCTCAGTGGGCCTTTCAGAATCTGGAACCAGACGGAGGTGGAGTTAAGGAGCATGGTAGAAGGTaGGGCCCGGCCAGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: SLAQWAFQNLEPDGGGVKEHGRR*GPARAG
Trigger: GCCTGCTCTGGCCGGGCCTCACCTTCTACCATGCTC...CTTAACTCCACCTCCGTCTGGTTCCAGATTCTGAAAGGCCCACTGAGCCAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR TCA 90 bp TTCATGACAGCTGTGAGCTCCTTACTGTGGGAGAGCTGCAGGGAGCCAAGGTGGAACCGTGGCCTGGCCTaGGGAGGTAGTGCTCCACTC +
Preference number: 4 (lower is better)
Translates to: FMTAVSSLLWESCREPRWNRGLA*GGSAPL
Trigger: GAGTGGAGCACTACCTCCTCAGGCCAGGCCACGGTT...CCACCTTGGCTCCCTGCAGCTCTCCCACAGTAAGGAGCTCACAGCTGTCATGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR TCA 90 bp TTGCCGCTCTCGTGTGAATCCAAGAAACTGCGTTCCTCAAAGGGGCCCTGGTTGTGGCCCTGGGCTGCCTaGACCTGGCCACACAGGCTT +
Preference number: 4 (lower is better)
Translates to: LPLSCESKKLRSSKGPWLWPWAA*TWPHRL
Trigger: AAGCCTGTGTGGCCAGGTTCAGGCAGCCCAGGGCCA...CAACCAGGGCCCCTTTGAGGAACGCAGTTTCTTGGATTCACACGAGAGCGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR TCA 90 bp TGGCCACACAGGCTTGCGGCAGCAAGAGCCCAGCCCATCTGTTTACAGGACGCTCCATCACAGGTTGGGTaGGGGGCAGGGGTCTTATAC +
Preference number: 4 (lower is better)
Translates to: WPHRLAAARAQPICLQDAPSQVG*GAGVLY
Trigger: GTATAAGACCCCTGCCCCTCACCCAACCTGTGATGG...AGCGTCCTGTAAACAGATGGGCTGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp TCCCTGGCTCAGTGGGCCTTTCAGAATCTGGAACCAGACGGAGGTGGAGTTAAGGGAACAGGGTGCGCATaGCCGTGGGGTCACCCCTTC +
Preference number: 4 (lower is better)
Translates to: SLAQWAFQNLEPDGGGVKGTGCA*PWGHPF
Trigger: GAAGGGGTGACCCCACGGGCATGCGCACCCTGTTCC...CTTAACTCCACCTCCGTCTGGTTCCAGATTCTGAAAGGCCCACTGAGCCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp AGCCTTACATCAGCTCTTCTCGCCCCATGGCTGAGGCCAGAGAGGAATGATCTGGGAACAGGGTGCGCATaGCCGTGGGGTCACCCCTTC +
Preference number: 4 (lower is better)
Translates to: SLTSALLAPWLRPERNDLGTGCA*PWGHPF
Trigger: GAAGGGGTGACCCCACGGGCATGCGCACCCTGTTCC...CAGATCATTCCTCTCTGGCCTCAGCCATGGGGCGAGAAGAGCTGATGTAAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp AGGAAAGGGAAACTGGTGAAAGGATTTGCTTGCCCAACCGTGGCCTGGCCTGAGTTGCGCGGTGCGAGCTaGTCCTCACTCAGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: RKGKLVKGFACPTVAWPELRGAS*SSLRPC
Trigger: GCAGGGCCTGAGTGAGGACCAGCTCGCACCGCGCAA...CTCAGGCCAGGCCACGGTTGGGCAAGCAAATCCTTTCACCAGTTTCCCTTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp CGGCAGCAAGAGCCCAGCCCATCTGTTTACAGGACGCTCAGCAGTTACTCCCAGTGTGCGCTCACTGCTTaGGAAGTGCAGGGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: RQQEPSPSVYRTLSSYSQCALTA*EVQGVL
Trigger: CAGGACCCCCTGCACTTCCCAAGCAGTGAGCGCACA...CTGGGAGTAACTGCTGAGCGTCCTGTAAACAGATGGGCTGGGCTCTTGCTGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR TCA 90 bp CATCCCCAAAGGAGGCCAAAGGTCCATGGGCGGCAGCCATCTTTCCCCACCCCCAATGGAAGTAGGAGCTaGGCTTCTTGGCCTCAGACA +
Preference number: 4 (lower is better)
Translates to: HPQRRPKVHGRQPSFPTPNGSRS*ASWPQT
Trigger: TGTCTGAGGCCAAGAAGCTCAGCTCCTACTTCCATT...GGGGGTGGGGAAAGATGGCTGCCGCCCATGGACCTTTGGCCTCCTTTGGGGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR TCA 90 bp CAGAGAGGAATGATCTGCTCTTCAGGCAGCCTCTTCGCCACCTTTTCCTCAGCAGAGCATGGTAGAAGGTaGGGCCCGGCCAGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: QRGMICSSGSLFATFSSAEHGRR*GPARAG
Trigger: GCCTGCTCTGGCCGGGCCTCACCTTCTACCATGCTC...TGCTGAGGAAAAGGTGGCGAAGAGGCTGCCTGAAGAGCAGATCATTCCTCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR TCA 90 bp GAGCCCAGCCCATCTGTTTACAGGACGCTCAGCAGTTACTCCCAGGAAAATCCCCCAAGGTGGGCTGCCTaGCACACTTGCCGCTCTCGT +
Preference number: 4 (lower is better)
Translates to: EPSPSVYRTLSSYSQENPPRWAA*HTCRSR
Trigger: ACGAGAGCGGCAAGTGTGTCAGGCAGCCCACCTTGG...GGGATTTTCCTGGGAGTAACTGCTGAGCGTCCTGTAAACAGATGGGCTGGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR TCA 90 bp ACATTTACAAAGATCAAGGGAGCTTGTGGCCCTGGGCTGCCTGAACCTGGCCACAACCGTGGCCTGGCCTaGGGAGGTAGTGCTCCACTC +
Preference number: 4 (lower is better)
Translates to: TFTKIKGACGPGLPEPGHNRGLA*GGSAPL
Trigger: GAGTGGAGCACTACCTCCTCAGGCCAGGCCACGGTT...GTGGCCAGGTTCAGGCAGCCCAGGGCCACAAGCTCCCTTGATCTTTGTAAATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR TCA 90 bp TGCCTGAACCTGGCCACACAGGCTTGCGGCAGCAAGAGCCCAGCCCATCTGTTTGAAGGTTGGGGTAGCTaGGTGAGCCAAATGGGGAAG +
Preference number: 4 (lower is better)
Translates to: CLNLATQACGSKSPAHLFEGWGS*VSQMGK
Trigger: CTTCCCCATTTGGCTCACTCAGCTACCCCAACCTTC...AAACAGATGGGCTGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCAGGTTCAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp GAGCCCAGCCCATCTGTTTACAGGACGCTCAGCAGTTACTCCCAGGAAAATCCCGAGCGTCTTGCGCGGTaGGAGCTGGTCCTCACTCAG +
Preference number: 4 (lower is better)
Translates to: EPSPSVYRTLSSYSQENPERLAR*ELVLTQ
Trigger: CTGAGTGAGGACCAGCTCGCACCGCGCAAGACGCTC...GGGATTTTCCTGGGAGTAACTGCTGAGCGTCCTGTAAACAGATGGGCTGGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp TCCCTGGCTCAGTGGGCCTTTCAGAATCTGGAACCAGACGGAGGTGGAGTTAAGGGAGCCAAGGTGGGCTaGCTGACACACTTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: SLAQWAFQNLEPDGGGVKGAKVG*LTHLPL
Trigger: GAGCGGCAAGTGTGTCAGGCAGCCCACCTTGGCTCC...CTTAACTCCACCTCCGTCTGGTTCCAGATTCTGAAAGGCCCACTGAGCCAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp GTAAAACCCAATCCTAGCCGGCATGAGCCACTTTTCTGGGAACTATCAGGGCCCCTGGCCACACAGGCTTaGGGCAGCAAGAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: VKPNPSRHEPLFWELSGPLATQA*GSKSPA
Trigger: GGCTGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCAG...GGGCCCTGATAGTTCCCAGAAAAGTGGCTCATGCCGGCTAGGATTGGGTTTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp CATCCTCTTCATGACAGCTGTGAGCTCCTTACTGTGGGAGAGCTGCAGGGAGCCAAGTGCAGGGGGTCCTaGGCACATTGCCAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: HPLHDSCELLTVGELQGAKCRGS*AHCQLG
Trigger: ACCCAGCTGGCAATGTGCCCAGGACCCCCTGCACTT...GGCTCCCTGCAGCTCTCCCACAGTAAGGAGCTCACAGCTGTCATGAAGAGGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp ACAAAGATCAAGGGAGCTTGTGGCCCTGGGCTGCCTGAACCTGGCCACACAGGCCATGGGCTTACCCATTaGGTGTGCGCTCACTGCTTG +
Preference number: 4 (lower is better)
Translates to: TKIKGACGPGLPEPGHTGHGLTH*VCAHCL
Trigger: CAAGCAGTGAGCGCACACCCAATGGGTAAGCCCATG...GCCTGTGTGGCCAGGTTCAGGCAGCCCAGGGCCACAAGCTCCCTTGATCTTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp GGCTGCCTGAACCTGGCCACACAGGCTTGCGGCAGCAAGAGCCCAGCCCATCTGCATAAACTGGGTTCATaGGCTTACCCATTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: GCLNLATQACGSKSPAHLHKLGS*AYPLGV
Trigger: CACACCCAATGGGTAAGCCCATGAACCCAGTTTATG...CAGATGGGCTGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCAGGTTCAGGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp GAGCCCAGCCCATCTGTTTACAGGACGCTCAGCAGTTACTCCCAGGAAAATCCCAGGTACCTGACGCGCTaGGCTCCTGGCTCCGTCAAG +
Preference number: 4 (lower is better)
Translates to: EPSPSVYRTLSSYSQENPRYLTR*APGSVK
Trigger: CTTGACGGAGCCAGGAGCCCAGCGCGTCAGGTACCT...GGGATTTTCCTGGGAGTAACTGCTGAGCGTCCTGTAAACAGATGGGCTGGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp TCCCTGGCTCAGTGGGCCTTTCAGAATCTGGAACCAGACGGAGGTGGAGTTAAGTGCCCAACCGTGGCCTaGCCTGAGGAGGTAGTGCTC +
Preference number: 4 (lower is better)
Translates to: SLAQWAFQNLEPDGGGVKCPTVA*PEEVVL
Trigger: GAGCACTACCTCCTCAGGCCAGGCCACGGTTGGGCA...CTTAACTCCACCTCCGTCTGGTTCCAGATTCTGAAAGGCCCACTGAGCCAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR TCA 90 bp TTTACAAAGATCAAGGGAGCTTGTGGCCCTGGGCTGCCTGAACCTGGCCACACAATGATGGGTCCCCCATaGAGCGGCCCTTCACCACAG +
Preference number: 4 (lower is better)
Translates to: FTKIKGACGPGLPEPGHTMMGPP*SGPSPQ
Trigger: CTGTGGTGAAGGGCCGCTTCATGGGGGACCCATCAT...TGTGTGGCCAGGTTCAGGCAGCCCAGGGCCACAAGCTCCCTTGATCTTTGTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR TCA 90 bp TGGGTTCATGGGCTTACCCATTGGGTGTGCGCTCACTGCTTGGGAAGTGCAGGGCACGTGAAGTCACCCTaGACAACTGCCTCAGACCCT +
Preference number: 4 (lower is better)
Translates to: WVHGLTHWVCAHCLGSAGHVKSP*TTASDP
Trigger: AGGGTCTGAGGCAGTTGTTCAGGGTGACTTCACGTG...CCCTGCACTTCCCAAGCAGTGAGCGCACACCCAATGGGTAAGCCCATGAACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372165.8
CDS-3UTR TCA 90 bp ACCTGGCCACACAGGCTTGCGGCAGCAAGAGCCCAGCCCATCTGTTTACAGGACTGCTCAGAAGCCACGTaGAGTCACCCTGAACAACTG +
Preference number: 4 (lower is better)
Translates to: TWPHRLAAARAQPICLQDCSEAT*SHPEQL
Trigger: CAGTTGTTCAGGGTGACTTCACGTGGCTTCTGAGCA...GTCCTGTAAACAGATGGGCTGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372165.8
CDS-3UTR TCA 90 bp CCCTGGCCATCCCCAAAGGAGGCCAAAGGTCCATGGGCGGCAGCCATCTTTCCCGGAAAGGGAAACTGGTaGAAGGATTTGCTTGCCCAA +
Preference number: 4 (lower is better)
Translates to: PWPSPKEAKGPWAAAIFPGKGNW*KDLLAQ
Trigger: TTGGGCAAGCAAATCCTTTCACCAGTTTCCCTTTCC...GGGAAAGATGGCTGCCGCCCATGGACCTTTGGCCTCCTTTGGGGATGGCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR TCA 90 bp TGGGTTCATGGGCTTACCCATTGGGTGTGCGCTCACTGCTTGGGAAGTGCAGGGGAAGGTTGGGGTAGCTaGGTGAGCCAAATGGGGAAG +
Preference number: 4 (lower is better)
Translates to: WVHGLTHWVCAHCLGSAGEGWGS*VSQMGK
Trigger: CTTCCCCATTTGGCTCACTCAGCTACCCCAACCTTC...CCCTGCACTTCCCAAGCAGTGAGCGCACACCCAATGGGTAAGCCCATGAACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR TCA 90 bp GAAGAGCAATGGGTTCCTCCAGAGCCTTACATCAGCTCTTCTCGCCCCATGGCTCGGGCCCTTACCCCTTaGTTCCCATCACAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: EEQWVPPEPYISSSRPMARALTP*FPSQVG
Trigger: CCCAACCTGTGATGGGAATCAAGGGGTAAGGGCCCG...AGCCATGGGGCGAGAAGAGCTGATGTAAGGCTCTGGAGGAACCCATTGCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp AGGAAAGGGAAACTGGTGAAAGGATTTGCTTGCCCAACCGTGGCCTGGCCTGAGGGCTATAGAGCGTCTTaGGCGGTGCGAGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: RKGKLVKGFACPTVAWPEGYRAS*AVRAGP
Trigger: AGGACCAGCTCGCACCGCGCAAGACGCTCTATAGCC...CTCAGGCCAGGCCACGGTTGGGCAAGCAAATCCTTTCACCAGTTTCCCTTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp TGGGTTCATGGGCTTACCCATTGGGTGTGCGCTCACTGCTTGGGAAGTGCAGGGTTCACCACAGACGACTaGGCCACCATCTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: WVHGLTHWVCAHCLGSAGFTTDD*ATISSV
Trigger: CACAGAGGAGATGGTGGCGCAGTCGTCTGTGGTGAA...CCCTGCACTTCCCAAGCAGTGAGCGCACACCCAATGGGTAAGCCCATGAACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp TCAAGGGAGCTTGTGGCCCTGGGCTGCCTGAACCTGGCCACACAGGCTTGCGGCCCTTTGGGAATGTCATaGTCCAAGGAGTCCATGAAA +
Preference number: 4 (lower is better)
Translates to: SRELVALGCLNLATQACGPLGMS*SKESMK
Trigger: TTTCATGGACTCCTTGGAGCATGACATTCCCAAAGG...GCCGCAAGCCTGTGTGGCCAGGTTCAGGCAGCCCAGGGCCACAAGCTCCCTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp CATCCTCTTCATGACAGCTGTGAGCTCCTTACTGTGGGAGAGCTGCAGGGAGCCTTACTGTGGGAGAGCTaGAGGGAGCCAAGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: HPLHDSCELLTVGELQGALLWES*REPRWA
Trigger: AGCCCACCTTGGCTCCCTGCAGCTCTCCCACAGTAA...GGCTCCCTGCAGCTCTCCCACAGTAAGGAGCTCACAGCTGTCATGAAGAGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp CATCCTCTTCATGACAGCTGTGAGCTCCTTACTGTGGGAGAGCTGCAGGGAGCCTCACTGCTTGGGAAGTaGAGGGGGTCCTGGGCACAT +
Preference number: 4 (lower is better)
Translates to: HPLHDSCELLTVGELQGASLLGK*RGSWAH
Trigger: ATGTGCCCAGGACCCCCTGCACTTCCCAAGCAGTGA...GGCTCCCTGCAGCTCTCCCACAGTAAGGAGCTCACAGCTGTCATGAAGAGGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp ACATTTACAAAGATCAAGGGAGCTTGTGGCCCTGGGCTGCCTGAACCTGGCCACTGGGTGTGCGCTCACTaGTTGGGAAGTGCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: TFTKIKGACGPGLPEPGHWVCAH*LGSAGG
Trigger: ACCCCCTGCACTTCCCAAGCAGTGAGCGCACACCCA...GTGGCCAGGTTCAGGCAGCCCAGGGCCACAAGCTCCCTTGATCTTTGTAAATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp TGCCTGAACCTGGCCACACAGGCTTGCGGCAGCAAGAGCCCAGCCCATCTGTTTCTTACCCATTGGGTGTaGGCTCACTGCTTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: CLNLATQACGSKSPAHLFLTHWV*AHCLGS
Trigger: ACTTCCCAAGCAGTGAGCGCACACCCAATGGGTAAG...AAACAGATGGGCTGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCAGGTTCAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp ACCTGGCCACACAGGCTTGCGGCAGCAAGAGCCCAGCCCATCTGTTTACAGGACCTTACCCATTGGGTGTaGGCTCACTGCTTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: TWPHRLAAARAQPICLQDLTHWV*AHCLGS
Trigger: ACTTCCCAAGCAGTGAGCGCACACCCAATGGGTAAG...GTCCTGTAAACAGATGGGCTGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp ACCTGGCCACACAGGCTTGCGGCAGCAAGAGCCCAGCCCATCTGTTTACAGGACACTGGTGAAAGGATTTaGTTGCCCAACCGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: TWPHRLAAARAQPICLQDTGERI*LPNRGL
Trigger: CAGGCCACGGTTGGGCAAGCAAATCCTTTCACCAGT...GTCCTGTAAACAGATGGGCTGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp CAAATGGGGAAGAGCAATGGGTTCCTCCAGAGCCTTACATCAGCTCTTCTCGCCCTTGTGGCCCTGGGCTaGCTGAACCTGGCCACACAG +
Preference number: 4 (lower is better)
Translates to: QMGKSNGFLQSLTSALLALVALG*LNLATQ
Trigger: CTGTGTGGCCAGGTTCAGGCAGCCCAGGGCCACAAG...GGCGAGAAGAGCTGATGTAAGGCTCTGGAGGAACCCATTGCTCTTCCCCATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp CACATTCCAACCCCTCTGCCACTTGGTTTAGAAATGAGCTCCCTGGCTCAGTGGCCACCATCTCCTCTGTaGCAGGGGGCAAGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: HIPTPLPLGLEMSSLAQWPPSPL*QGARGS
Trigger: GGAGCCTCTTGCCCCCTGCCACAGAGGAGATGGTGG...CCACTGAGCCAGGGAGCTCATTTCTAAACCAAGTGGCAGAGGGGTTGGAATGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp ATGGGCTTACCCATTGGGTGTGCGCTCACTGCTTGGGAAGTGCAGGGGGTCCTGAAGGTCCGATTGACATaGGTGGGTCCAAAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: MGLPIGCALTAWEVQGVLKVRLT*VGPKGV
Trigger: GACCCCTTTTGGACCCACCCATGTCAATCGGACCTT...CAGGACCCCCTGCACTTCCCAAGCAGTGAGCGCACACCCAATGGGTAAGCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp GAAGAGCAATGGGTTCCTCCAGAGCCTTACATCAGCTCTTCTCGCCCCATGGCTTGTGCGCTCACTGCTTaGGAAGTGCAGGGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: EEQWVPPEPYISSSRPMACALTA*EVQGVL
Trigger: CAGGACCCCCTGCACTTCCCAAGCAGTGAGCGCACA...AGCCATGGGGCGAGAAGAGCTGATGTAAGGCTCTGGAGGAACCCATTGCTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR TCA 90 bp TGCCTGAACCTGGCCACACAGGCTTGCGGCAGCAAGAGCCCAGCCCATCTGTTTCTTCAAAGGTCCGATTaGCATGGGTGGGTCCAAAAG +
Preference number: 4 (lower is better)
Translates to: CLNLATQACGSKSPAHLFLQRSD*HGWVQK
Trigger: CTTTTGGACCCACCCATGTCAATCGGACCTTTGAAG...AAACAGATGGGCTGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCAGGTTCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR TCA 90 bp ACTTGCCGCTCTCGTGTGAATCCAAGAAACTGCGTTCCTCAAAGGGGCCCTGGTGCTCCAAGGAGTCCATaGAATCCAGGGAGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: TCRSRVNPRNCVPQRGPGAPRSP*NPGRGP
Trigger: TGGACCCCTCCCTGGATTTCATGGACTCCTTGGAGC...ACCAGGGCCCCTTTGAGGAACGCAGTTTCTTGGATTCACACGAGAGCGGCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR TCA 90 bp ACTTGCCGCTCTCGTGTGAATCCAAGAAACTGCGTTCCTCAAAGGGGCCCTGGTCCATCACAGGTTGGGTaGGGGGCAGGGGTCTTATAC +
Preference number: 4 (lower is better)
Translates to: TCRSRVNPRNCVPQRGPGPSQVG*GAGVLY
Trigger: GTATAAGACCCCTGCCCCTCACCCAACCTGTGATGG...ACCAGGGCCCCTTTGAGGAACGCAGTTTCTTGGATTCACACGAGAGCGGCAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR TCA 90 bp CACATTCCAACCCCTCTGCCACTTGGTTTAGAAATGAGCTCCCTGGCTCAGTGGCGGGCCCTTACCCCTTaGTTCCCATCACAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: HIPTPLPLGLEMSSLAQWRALTP*FPSQVG
Trigger: CCCAACCTGTGATGGGAATCAAGGGGTAAGGGCCCG...CCACTGAGCCAGGGAGCTCATTTCTAAACCAAGTGGCAGAGGGGTTGGAATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp GAGCAATGGGTTCCTCCAGAGCCTTACATCAGCTCTTCTCGCCCCATGGCTGAGTTCACCACAGACGACTaGGCCACCATCTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: EQWVPPEPYISSSRPMAEFTTDD*ATISSV
Trigger: CACAGAGGAGATGGTGGCGCAGTCGTCTGTGGTGAA...CTCAGCCATGGGGCGAGAAGAGCTGATGTAAGGCTCTGGAGGAACCCATTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp GAGCCCAGCCCATCTGTTTACAGGACGCTCAGCAGTTACTCCCAGGAAAATCCCTTACTGTGGGAGAGCTaGAGGGAGCCAAGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: EPSPSVYRTLSSYSQENPLLWES*REPRWA
Trigger: AGCCCACCTTGGCTCCCTGCAGCTCTCCCACAGTAA...GGGATTTTCCTGGGAGTAACTGCTGAGCGTCCTGTAAACAGATGGGCTGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp CACATTCCAACCCCTCTGCCACTTGGTTTAGAAATGAGCTCCCTGGCTCAGTGGGGGTCCTGGGCACATTaGCAGCTGGGTGCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: HIPTPLPLGLEMSSLAQWGSWAH*QLGAEH
Trigger: ATGCTCAGCACCCAGCTGGCAATGTGCCCAGGACCC...CCACTGAGCCAGGGAGCTCATTTCTAAACCAAGTGGCAGAGGGGTTGGAATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp GAGCCCAGCCCATCTGTTTACAGGACGCTCAGCAGTTACTCCCAGGAAAATCCCTCACTGCTTGGGAAGTaGAGGGGGTCCTGGGCACAT +
Preference number: 4 (lower is better)
Translates to: EPSPSVYRTLSSYSQENPSLLGK*RGSWAH
Trigger: ATGTGCCCAGGACCCCCTGCACTTCCCAAGCAGTGA...GGGATTTTCCTGGGAGTAACTGCTGAGCGTCCTGTAAACAGATGGGCTGGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp CGGCAGCAAGAGCCCAGCCCATCTGTTTACAGGACGCTCAGCAGTTACTCCCAGCTGCCTCAGACCCTTTaGGAATGTCATGCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: RQQEPSPSVYRTLSSYSQLPQTL*ECHAPR
Trigger: CCTTGGAGCATGACATTCCCAAAGGGTCTGAGGCAG...CTGGGAGTAACTGCTGAGCGTCCTGTAAACAGATGGGCTGGGCTCTTGCTGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372165.8
CDS-3UTR CCA 90 bp CATCCCCAAAGGAGGCCAAAGGTCCATGGGCGGCAGCCATCTTTCCCCACCCCCAGTCAATTGAATTCATaGGCCAAACAGGTCCCATCC +
Preference number: 4 (lower is better)
Translates to: HPQRRPKVHGRQPSFPTPSQLNS*AKQVPS
Trigger: GGATGGGACCTGTTTGGCCCATGAATTCAATTGACT...GGGGGTGGGGAAAGATGGCTGCCGCCCATGGACCTTTGGCCTCCTTTGGGGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp AGGAAAGGGAAACTGGTGAAAGGATTTGCTTGCCCAACCGTGGCCTGGCCTGAGCCTTGCCAGCTGCTATaGGGCTTAGGCCATGCTCAG +
Preference number: 4 (lower is better)
Translates to: RKGKLVKGFACPTVAWPEPCQLL*GLGHAQ
Trigger: CTGAGCATGGCCTAAGCCCCATAGCAGCTGGCAAGG...CTCAGGCCAGGCCACGGTTGGGCAAGCAAATCCTTTCACCAGTTTCCCTTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp CACATTCCAACCCCTCTGCCACTTGGTTTAGAAATGAGCTCCCTGGCTCAGTGGCCCACCACGATGGCCTaGTCCCTCCAACATGCATGG +
Preference number: 4 (lower is better)
Translates to: HIPTPLPLGLEMSSLAQWPTTMA*SLQHAW
Trigger: CCATGCATGTTGGAGGGACCAGGCCATCGTGGTGGG...CCACTGAGCCAGGGAGCTCATTTCTAAACCAAGTGGCAGAGGGGTTGGAATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp AGGAAAGGGAAACTGGTGAAAGGATTTGCTTGCCCAACCGTGGCCTGGCCTGAGGCTCTTCTCGCCCCATaGCTGAGGCCAGAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: RKGKLVKGFACPTVAWPEALLAP*LRPERN
Trigger: ATTCCTCTCTGGCCTCAGCCATGGGGCGAGAAGAGC...CTCAGGCCAGGCCACGGTTGGGCAAGCAAATCCTTTCACCAGTTTCCCTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp CACATTCCAACCCCTCTGCCACTTGGTTTAGAAATGAGCTCCCTGGCTCAGTGGGAGGCCAAAGGTCCATaGGCGGCAGCCATCTTTCCC +
Preference number: 4 (lower is better)
Translates to: HIPTPLPLGLEMSSLAQWEAKGP*AAAIFP
Trigger: GGGAAAGATGGCTGCCGCCCATGGACCTTTGGCCTC...CCACTGAGCCAGGGAGCTCATTTCTAAACCAAGTGGCAGAGGGGTTGGAATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
3UTR CAA 72 bp ACGCAGTGTCATAAACTGGGTTCATGGGCTTACCCATaGGGTGTGCGCTCACTGCTTGGGAAGTGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: TQCHKLGSWAYP*GVRSLLGKCRG
Trigger: CCCCCTGCACTTCCCAAGCAGTGAGCGCACACCCAATGGGTAAGCCCATGAACCCAGTTTATGACACTGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR TCA 90 bp CAAATGGGGAAGAGCAATGGGTTCCTCCAGAGCCTTACATCAGCTCTTCTCGCCGCTCCAAGGAGTCCATaGAATCCAGGGAGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: QMGKSNGFLQSLTSALLAAPRSP*NPGRGP
Trigger: TGGACCCCTCCCTGGATTTCATGGACTCCTTGGAGC...GGCGAGAAGAGCTGATGTAAGGCTCTGGAGGAACCCATTGCTCTTCCCCATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR TCA 90 bp CATCCTCTTCATGACAGCTGTGAGCTCCTTACTGTGGGAGAGCTGCAGGGAGCCCTTGCCGCTCTCGTGTaGATCCAAGAAACTGCGTTC +
Preference number: 4 (lower is better)
Translates to: HPLHDSCELLTVGELQGALAALV*IQETAF
Trigger: GAACGCAGTTTCTTGGATTCACACGAGAGCGGCAAG...GGCTCCCTGCAGCTCTCCCACAGTAAGGAGCTCACAGCTGTCATGAAGAGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp TTCATGACAGCTGTGAGCTCCTTACTGTGGGAGAGCTGCAGGGAGCCAAGGTGGAGAGGCTCCACTCTGTaGAGTTCAGGCTATAGAGCG +
Preference number: 4 (lower is better)
Translates to: FMTAVSSLLWESCREPRWRGSTL*SSGYRA
Trigger: CGCTCTATAGCCTGAACTGCACAGAGTGGAGCCTCT...CCACCTTGGCTCCCTGCAGCTCTCCCACAGTAAGGAGCTCACAGCTGTCATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp TTTACAAAGATCAAGGGAGCTTGTGGCCCTGGGCTGCCTGAACCTGGCCACACAGTGAAAGGATTTGCTTaGCCAACCGTGGCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: FTKIKGACGPGLPEPGHTVKGFA*PTVAWP
Trigger: AGGCCAGGCCACGGTTGGGCAAGCAAATCCTTTCAC...TGTGTGGCCAGGTTCAGGCAGCCCAGGGCCACAAGCTCCCTTGATCTTTGTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp TGGGTTCATGGGCTTACCCATTGGGTGTGCGCTCACTGCTTGGGAAGTGCAGGGCAGAGAGGAATGATCTaGTCTTCAGGCAGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: WVHGLTHWVCAHCLGSAGQRGMI*SSGSLF
Trigger: GAAGAGGCTGCCTGAAGAGCAGATCATTCCTCTCTG...CCCTGCACTTCCCAAGCAGTGAGCGCACACCCAATGGGTAAGCCCATGAACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp CGGCAGCAAGAGCCCAGCCCATCTGTTTACAGGACGCTCAGCAGTTACTCCCAGCAGAGAGGAATGATCTaGTCTTCAGGCAGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: RQQEPSPSVYRTLSSYSQQRGMI*SSGSLF
Trigger: GAAGAGGCTGCCTGAAGAGCAGATCATTCCTCTCTG...CTGGGAGTAACTGCTGAGCGTCCTGTAAACAGATGGGCTGGGCTCTTGCTGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp ACATTTACAAAGATCAAGGGAGCTTGTGGCCCTGGGCTGCCTGAACCTGGCCACGGGCCTTTCAGAATCTaGAACCAGACGGAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: TFTKIKGACGPGLPEPGHGPFRI*NQTEVE
Trigger: CTCCACCTCCGTCTGGTTCCAGATTCTGAAAGGCCC...GTGGCCAGGTTCAGGCAGCCCAGGGCCACAAGCTCCCTTGATCTTTGTAAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp AGCCTTACATCAGCTCTTCTCGCCCCATGGCTGAGGCCAGAGAGGAATGATCTGTCCTCAAAGGGGCCCTaGTTGTCACCTTCTCCCACA +
Preference number: 4 (lower is better)
Translates to: SLTSALLAPWLRPERNDLSSKGP*LSPSPT
Trigger: TGTGGGAGAAGGTGACAACCAGGGCCCCTTTGAGGA...CAGATCATTCCTCTCTGGCCTCAGCCATGGGGCGAGAAGAGCTGATGTAAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp GAGCCCAGCCCATCTGTTTACAGGACGCTCAGCAGTTACTCCCAGGAAAATCCCCATGGGCTTACCCATTaGGTGTGCGCTCACTGCTTG +
Preference number: 4 (lower is better)
Translates to: EPSPSVYRTLSSYSQENPHGLTH*VCAHCL
Trigger: CAAGCAGTGAGCGCACACCCAATGGGTAAGCCCATG...GGGATTTTCCTGGGAGTAACTGCTGAGCGTCCTGTAAACAGATGGGCTGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp TGCCTGAACCTGGCCACACAGGCTTGCGGCAGCAAGAGCCCAGCCCATCTGTTTCATAAACTGGGTTCATaGGCTTACCCATTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: CLNLATQACGSKSPAHLFHKLGS*AYPLGV
Trigger: CACACCCAATGGGTAAGCCCATGAACCCAGTTTATG...AAACAGATGGGCTGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCAGGTTCAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp TTCATGACAGCTGTGAGCTCCTTACTGTGGGAGAGCTGCAGGGAGCCAAGGTGGTGCTCCAGGACCCTTTaGGAATGTCATGCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: FMTAVSSLLWESCREPRWCSRTL*ECHAPR
Trigger: CCTTGGAGCATGACATTCCCAAAGGGTCCTGGAGCA...CCACCTTGGCTCCCTGCAGCTCTCCCACAGTAAGGAGCTCACAGCTGTCATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372163.5
CDS-3UTR TCA 90 bp CAGGGAGCCAAGGTGGGCTGCCTGACACACTTGCCGCTCTCGTGTGAATCCAAGTCCCATTCTATAGCATaGAGGGCAAGTCCATGTTCT +
Preference number: 4 (lower is better)
Translates to: QGAKVGCLTHLPLSCESKSHSIA*RASPCS
Trigger: AGAACATGGACTTGCCCTTCATGCTATAGAATGGGA...CTTGGATTCACACGAGAGCGGCAAGTGTGTCAGGCAGCCCACCTTGGCTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp TTTACAAAGATCAAGGGAGCTTGTGGCCCTGGGCTGCCTGAACCTGGCCACACAAGAGGCTCCACTCTGTaGAGTTCAGGCTATAGAGCG +
Preference number: 4 (lower is better)
Translates to: FTKIKGACGPGLPEPGHTRGSTL*SSGYRA
Trigger: CGCTCTATAGCCTGAACTGCACAGAGTGGAGCCTCT...TGTGTGGCCAGGTTCAGGCAGCCCAGGGCCACAAGCTCCCTTGATCTTTGTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp ACTTGCCGCTCTCGTGTGAATCCAAGAAACTGCGTTCCTCAAAGGGGCCCTGGTAGCCATAGTTCTTGGTaGGGGGAGCATGGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: TCRSRVNPRNCVPQRGPGSHSSW*GEHGRR
Trigger: CCTTCTACCATGCTCCCCGCACCAAGAACTATGGCT...ACCAGGGCCCCTTTGAGGAACGCAGTTTCTTGGATTCACACGAGAGCGGCAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp TCCCTGGCTCAGTGGGCCTTTCAGAATCTGGAACCAGACGGAGGTGGAGTTAAGACTGGTGAAAGGATTTaGTTGCCCAACCGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: SLAQWAFQNLEPDGGGVKTGERI*LPNRGL
Trigger: CAGGCCACGGTTGGGCAAGCAAATCCTTTCACCAGT...CTTAACTCCACCTCCGTCTGGTTCCAGATTCTGAAAGGCCCACTGAGCCAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp CTAGCCGGCATGAGCCACTTTTCTGGGAACTATCAGGGCCCTGGCCATCCCCAATCCCAGGAAAATCCCTaGACTTCAGGAAAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: LAGMSHFSGNYQGPGHPQSQENP*TSGKGN
Trigger: GTTTCCCTTTCCTGAAGTGCAGGGATTTTCCTGGGA...TTGGGGATGGCCAGGGCCCTGATAGTTCCCAGAAAAGTGGCTCATGCCGGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp TTGCCGCTCTCGTGTGAATCCAAGAAACTGCGTTCCTCAAAGGGGCCCTGGTTGAGCTCCCTGGCTCAGTaGGCCTTTCAGAATCTGGAA +
Preference number: 4 (lower is better)
Translates to: LPLSCESKKLRSSKGPWLSSLAQ*AFQNLE
Trigger: TTCCAGATTCTGAAAGGCCCACTGAGCCAGGGAGCT...CAACCAGGGCCCCTTTGAGGAACGCAGTTTCTTGGATTCACACGAGAGCGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp CACATTCCAACCCCTCTGCCACTTGGTTTAGAAATGAGCTCCCTGGCTCAGTGGTCCTCAAAGGGGCCCTaGTTGTCACCTTCTCCCACA +
Preference number: 4 (lower is better)
Translates to: HIPTPLPLGLEMSSLAQWSSKGP*LSPSPT
Trigger: TGTGGGAGAAGGTGACAACCAGGGCCCCTTTGAGGA...CCACTGAGCCAGGGAGCTCATTTCTAAACCAAGTGGCAGAGGGGTTGGAATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp CACATTCCAACCCCTCTGCCACTTGGTTTAGAAATGAGCTCCCTGGCTCAGTGGGGGCACATTGCCAGCTaGGTGCTGAGCATTGAGTCA +
Preference number: 4 (lower is better)
Translates to: HIPTPLPLGLEMSSLAQWGHIAS*VLSIES
Trigger: TGACTCAATGCTCAGCACCCAGCTGGCAATGTGCCC...CCACTGAGCCAGGGAGCTCATTTCTAAACCAAGTGGCAGAGGGGTTGGAATGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp CTGTTTACAGGACGCTCAGCAGTTACTCCCAGGAAAATCCCTGCACTTCAGGAAGAGGCCAAAGGTCCATaGGCGGCAGCCATCTTTCCC +
Preference number: 4 (lower is better)
Translates to: LFTGRSAVTPRKIPALQEEAKGP*AAAIFP
Trigger: GGGAAAGATGGCTGCCGCCCATGGACCTTTGGCCTC...TTCCTGAAGTGCAGGGATTTTCCTGGGAGTAACTGCTGAGCGTCCTGTAAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp AGCCTTACATCAGCTCTTCTCGCCCCATGGCTGAGGCCAGAGAGGAATGATCTGGTCACCCTGAACAACTaGCTCAGACCCTTTGGGAAT +
Preference number: 4 (lower is better)
Translates to: SLTSALLAPWLRPERNDLVTLNN*LRPFGN
Trigger: ATTCCCAAAGGGTCTGAGGCAGTTGTTCAGGGTGAC...CAGATCATTCCTCTCTGGCCTCAGCCATGGGGCGAGAAGAGCTGATGTAAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372165.8
CDS-3UTR GCA 90 bp CAAATGGGGAAGAGCAATGGGTTCCTCCAGAGCCTTACATCAGCTCTTCTCGCCAGCCATAGTTCTTGGTaGGGGGAGCATGGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: QMGKSNGFLQSLTSALLASHSSW*GEHGRR
Trigger: CCTTCTACCATGCTCCCCGCACCAAGAACTATGGCT...GGCGAGAAGAGCTGATGTAAGGCTCTGGAGGAACCCATTGCTCTTCCCCATTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp AGCCTTACATCAGCTCTTCTCGCCCCATGGCTGAGGCCAGAGAGGAATGATCTGGTGAATCCAAGAAACTaGGTTCCTCAAAGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: SLTSALLAPWLRPERNDLVNPRN*VPQRGP
Trigger: AGGGCCCCTTTGAGGAACGCAGTTTCTTGGATTCAC...CAGATCATTCCTCTCTGGCCTCAGCCATGGGGCGAGAAGAGCTGATGTAAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp TTTACAAAGATCAAGGGAGCTTGTGGCCCTGGGCTGCCTGAACCTGGCCACACAAATGGGGAAGAGCAATaGGTTCCTCCAGAGCCTTAC +
Preference number: 4 (lower is better)
Translates to: FTKIKGACGPGLPEPGHTNGEEQ*VPPEPY
Trigger: GTAAGGCTCTGGAGGAACCCATTGCTCTTCCCCATT...TGTGTGGCCAGGTTCAGGCAGCCCAGGGCCACAAGCTCCCTTGATCTTTGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR TCA 90 bp GTAAAACCCAATCCTAGCCGGCATGAGCCACTTTTCTGGGAACTATCAGGGCCCGTGTTCATATTCGTATaGTGGGTCCCCCATGAAGCG +
Preference number: 4 (lower is better)
Translates to: VKPNPSRHEPLFWELSGPVFIFV*WVPHEA
Trigger: CGCTTCATGGGGGACCCATCATACGAATATGAACAC...GGGCCCTGATAGTTCCCAGAAAAGTGGCTCATGCCGGCTAGGATTGGGTTTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR TCA 90 bp AGGAAAGGGAAACTGGTGAAAGGATTTGCTTGCCCAACCGTGGCCTGGCCTGAGGGAAAGGGAAACTGGTaGAAGGATTTGCTTGCCCAA +
Preference number: 4 (lower is better)
Translates to: RKGKLVKGFACPTVAWPEGKGNW*KDLLAQ
Trigger: TTGGGCAAGCAAATCCTTTCACCAGTTTCCCTTTCC...CTCAGGCCAGGCCACGGTTGGGCAAGCAAATCCTTTCACCAGTTTCCCTTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR TCA 90 bp ACTTGCCGCTCTCGTGTGAATCCAAGAAACTGCGTTCCTCAAAGGGGCCCTGGTAGCGGGTCTCTTCCTTaGTCTGGACCACTATTTCTT +
Preference number: 4 (lower is better)
Translates to: TCRSRVNPRNCVPQRGPGSGSLP*SGPLFL
Trigger: AAGAAATAGTGGTCCAGATCAAGGAAGAGACCCGCT...ACCAGGGCCCCTTTGAGGAACGCAGTTTCTTGGATTCACACGAGAGCGGCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372163.5
CDS-3UTR CCA 90 bp CCAGACGGAGGTGGAGTTAAGAAGATAGGACAGAACAGGCAGGCCAAGTTCACTCGTAGCCATAGTTCTTaGTGCGGGGAGCATGGTAGA +
Preference number: 4 (lower is better)
Translates to: PDGGGVKKIGQNRQAKFTRSHSS*CGEHGR
Trigger: TCTACCATGCTCCCCGCACCAAGAACTATGGCTACG...AGTGAACTTGGCCTGCCTGTTCTGTCCTATCTTCTTAACTCCACCTCCGTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp CTGTTTACAGGACGCTCAGCAGTTACTCCCAGGAAAATCCCTGCACTTCAGGAAGGGCCTTTCAGAATCTaGAACCAGACGGAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LFTGRSAVTPRKIPALQEGPFRI*NQTEVE
Trigger: CTCCACCTCCGTCTGGTTCCAGATTCTGAAAGGCCC...TTCCTGAAGTGCAGGGATTTTCCTGGGAGTAACTGCTGAGCGTCCTGTAAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp CATTTCCACCCATCGTTGTCTAGAATCTCTTTCATTAGCACATTCCAACCCCTCGACGCGCTGGGCTCCTaGCTCCGTCAAGCCCATCTA +
Preference number: 4 (lower is better)
Translates to: HFHPSLSRISFISTFQPLDALGS*LRQAHL
Trigger: TAGATGGGCTTGACGGAGCCAGGAGCCCAGCGCGTC...GAGGGGTTGGAATGTGCTAATGAAAGAGATTCTAGACAACGATGGGTGGAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp CAGAGAGGAATGATCTGCTCTTCAGGCAGCCTCTTCGCCACCTTTTCCTCAGCAAATGGGGAAGAGCAATaGGTTCCTCCAGAGCCTTAC +
Preference number: 4 (lower is better)
Translates to: QRGMICSSGSLFATFSSANGEEQ*VPPEPY
Trigger: GTAAGGCTCTGGAGGAACCCATTGCTCTTCCCCATT...TGCTGAGGAAAAGGTGGCGAAGAGGCTGCCTGAAGAGCAGATCATTCCTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp CACATTCCAACCCCTCTGCCACTTGGTTTAGAAATGAGCTCCCTGGCTCAGTGGTCCCAGGAAAATCCCTaGACTTCAGGAAAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: HIPTPLPLGLEMSSLAQWSQENP*TSGKGN
Trigger: GTTTCCCTTTCCTGAAGTGCAGGGATTTTCCTGGGA...CCACTGAGCCAGGGAGCTCATTTCTAAACCAAGTGGCAGAGGGGTTGGAATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp CAGAGAGGAATGATCTGCTCTTCAGGCAGCCTCTTCGCCACCTTTTCCTCAGCAAACCCCTCTGCCACTTaGTTTAGAAATGAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: QRGMICSSGSLFATFSSANPSAT*FRNELP
Trigger: AGGGAGCTCATTTCTAAACCAAGTGGCAGAGGGGTT...TGCTGAGGAAAAGGTGGCGAAGAGGCTGCCTGAAGAGCAGATCATTCCTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp GAAGAGCAATGGGTTCCTCCAGAGCCTTACATCAGCTCTTCTCGCCCCATGGCTAGTCAATTGAATTCATaGGCCAAACAGGTCCCATCC +
Preference number: 4 (lower is better)
Translates to: EEQWVPPEPYISSSRPMASQLNS*AKQVPS
Trigger: GGATGGGACCTGTTTGGCCCATGAATTCAATTGACT...AGCCATGGGGCGAGAAGAGCTGATGTAAGGCTCTGGAGGAACCCATTGCTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR TCA 90 bp ACTTGCCGCTCTCGTGTGAATCCAAGAAACTGCGTTCCTCAAAGGGGCCCTGGTGCAGGCCAAGTTCACTaGAGCTTAAGAAAATCATGT +
Preference number: 4 (lower is better)
Translates to: TCRSRVNPRNCVPQRGPGAGQVH*SLRKSC
Trigger: ACATGATTTTCTTAAGCTTCAGTGAACTTGGCCTGC...ACCAGGGCCCCTTTGAGGAACGCAGTTTCTTGGATTCACACGAGAGCGGCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp TCAATTGAATTCATGGGCCAAACAGGTCCCATCCTCTTCATGACAGCTGTGAGCCATGAGCCACTTTTCTaGGAACTATCAGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SIEFMGQTGPILFMTAVSHEPLF*ELSGPW
Trigger: CCAGGGCCCTGATAGTTCCCAGAAAAGTGGCTCATG...GCTCACAGCTGTCATGAAGAGGATGGGACCTGTTTGGCCCATGAATTCAATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR TCA 90 bp CAGAGAGGAATGATCTGCTCTTCAGGCAGCCTCTTCGCCACCTTTTCCTCAGCAGCAGGCCAAGTTCACTaGAGCTTAAGAAAATCATGT +
Preference number: 4 (lower is better)
Translates to: QRGMICSSGSLFATFSSAAGQVH*SLRKSC
Trigger: ACATGATTTTCTTAAGCTTCAGTGAACTTGGCCTGC...TGCTGAGGAAAAGGTGGCGAAGAGGCTGCCTGAAGAGCAGATCATTCCTCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR TCA 90 bp CATTTCCACCCATCGTTGTCTAGAATCTCTTTCATTAGCACATTCCAACCCCTCGTTGGGGTAGCTGAGTaGGCCAAATGGGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: HFHPSLSRISFISTFQPLVGVAE*AKWGRA
Trigger: TGCTCTTCCCCATTTGGCTCACTCAGCTACCCCAAC...GAGGGGTTGGAATGTGCTAATGAAAGAGATTCTAGACAACGATGGGTGGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp CCAGACGGAGGTGGAGTTAAGAAGATAGGACAGAACAGGCAGGCCAAGTTCACTCCTTTGGGAATGTCATaGTCCAAGGAGTCCATGAAA +
Preference number: 4 (lower is better)
Translates to: PDGGGVKKIGQNRQAKFTPLGMS*SKESMK
Trigger: TTTCATGGACTCCTTGGAGCATGACATTCCCAAAGG...AGTGAACTTGGCCTGCCTGTTCTGTCCTATCTTCTTAACTCCACCTCCGTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp CATTTCCACCCATCGTTGTCTAGAATCTCTTTCATTAGCACATTCCAACCCCTCGGGCACATTGCCAGCTaGGTGCTGAGCATTGAGTCA +
Preference number: 4 (lower is better)
Translates to: HFHPSLSRISFISTFQPLGHIAS*VLSIES
Trigger: TGACTCAATGCTCAGCACCCAGCTGGCAATGTGCCC...GAGGGGTTGGAATGTGCTAATGAAAGAGATTCTAGACAACGATGGGTGGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp TGGCTCAGTGGGCCTTTCAGAATCTGGAACCAGACGGAGGTGGAGTTAAGAAGAACAGCCTTGTCAATCTaGTCAATGACAGACACCAAG +
Preference number: 4 (lower is better)
Translates to: WLSGPFRIWNQTEVELRRTALSI*SMTDTK
Trigger: CTTGGTGTCTGTCATTGACCAGATTGACAAGGCTGT...TCTTCTTAACTCCACCTCCGTCTGGTTCCAGATTCTGAAAGGCCCACTGAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372163.5
CDS-3UTR TCA 90 bp CATTTCCACCCATCGTTGTCTAGAATCTCTTTCATTAGCACATTCCAACCCCTCCTTGCCGCTCTCGTGTaGATCCAAGAAACTGCGTTC +
Preference number: 4 (lower is better)
Translates to: HFHPSLSRISFISTFQPLLAALV*IQETAF
Trigger: GAACGCAGTTTCTTGGATTCACACGAGAGCGGCAAG...GAGGGGTTGGAATGTGCTAATGAAAGAGATTCTAGACAACGATGGGTGGAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CCA 90 bp CATTTCCACCCATCGTTGTCTAGAATCTCTTTCATTAGCACATTCCAACCCCTCCATGAGCCACTTTTCTaGGAACTATCAGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: HFHPSLSRISFISTFQPLHEPLF*ELSGPW
Trigger: CCAGGGCCCTGATAGTTCCCAGAAAAGTGGCTCATG...GAGGGGTTGGAATGTGCTAATGAAAGAGATTCTAGACAACGATGGGTGGAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR TCA 90 bp GGCAGGCCAAGTTCACTGAAGCTTAAGAAAATCATGTTTAGACTCTGTTTAAAAATGATGGGTCCCCCATaGAGCGGCCCTTCACCACAG +
Preference number: 4 (lower is better)
Translates to: GRPSSLKLKKIMFRLCLKMMGPP*SGPSPQ
Trigger: CTGTGGTGAAGGGCCGCTTCATGGGGGACCCATCAT...TTTTAAACAGAGTCTAAACATGATTTTCTTAAGCTTCAGTGAACTTGGCCTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372163.5
CDS-3UTR TCA 90 bp TCAATTGAATTCATGGGCCAAACAGGTCCCATCCTCTTCATGACAGCTGTGAGCTCCCATTCTATAGCATaGAGGGCAAGTCCATGTTCT +
Preference number: 4 (lower is better)
Translates to: SIEFMGQTGPILFMTAVSSHSIA*RASPCS
Trigger: AGAACATGGACTTGCCCTTCATGCTATAGAATGGGA...GCTCACAGCTGTCATGAAGAGGATGGGACCTGTTTGGCCCATGAATTCAATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR TCA 90 bp CATTTCCACCCATCGTTGTCTAGAATCTCTTTCATTAGCACATTCCAACCCCTCTGTCAATCTGGTCAATaGCAGACACCAAGCGGGTCT +
Preference number: 4 (lower is better)
Translates to: HFHPSLSRISFISTFQPLCQSGQ*QTPSGS
Trigger: AGACCCGCTTGGTGTCTGTCATTGACCAGATTGACA...GAGGGGTTGGAATGTGCTAATGAAAGAGATTCTAGACAACGATGGGTGGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372163.5
3UTR CAA 72 bp GTTGTCACCTTCTCCCACAGCCATTTCCACCCATCGTaGTCTAGAATCTCTTTCATTAGCACATTCCAACCC +
Preference number: 4 (lower is better)
Translates to: VVTFSHSHFHPS*SRISFISTFQP
Trigger: GGGTTGGAATGTGCTAATGAAAGAGATTCTAGACAACGATGGGTGGAAATGGCTGTGGGAGAAGGTGACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR GCA 90 bp GGCAGGCCAAGTTCACTGAAGCTTAAGAAAATCATGTTTAGACTCTGTTTAAAATGTTCTTCTCGCCAGTaGCCACGTAGACGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: GRPSSLKLKKIMFRLCLKCSSRQ*PRRRSH
Trigger: ATGGCTACGTCTACGTGGGCACTGGCGAGAAGAACA...TTTTAAACAGAGTCTAAACATGATTTTCTTAAGCTTCAGTGAACTTGGCCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372163.5
CDS-3UTR TCA 90 bp GGCAGGCCAAGTTCACTGAAGCTTAAGAAAATCATGTTTAGACTCTGTTTAAAAGTGTTCATATTCGTATaGTGGGTCCCCCATGAAGCG +
Preference number: 4 (lower is better)
Translates to: GRPSSLKLKKIMFRLCLKVFIFV*WVPHEA
Trigger: CGCTTCATGGGGGACCCATCATACGAATATGAACAC...TTTTAAACAGAGTCTAAACATGATTTTCTTAAGCTTCAGTGAACTTGGCCTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372163.5
CDS-3UTR GCA 90 bp GGCAGGCCAAGTTCACTGAAGCTTAAGAAAATCATGTTTAGACTCTGTTTAAAAGTGAATCCAAGAAACTaGGTTCCTCAAAGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: GRPSSLKLKKIMFRLCLKVNPRN*VPQRGP
Trigger: AGGGCCCCTTTGAGGAACGCAGTTTCTTGGATTCAC...TTTTAAACAGAGTCTAAACATGATTTTCTTAAGCTTCAGTGAACTTGGCCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372163.5
CDS-3UTR CAA 90 bp ATGGGCTTACCCATTGGGTGTGCGCTCACTGCTTGGGAAGTGCAGGGGGTCCTGGGTCCAAAAGGGGTCTaGAAGAGGGCGCCTCGGGGG +
Preference number: 5 (lower is better)
Translates to: MGLPIGCALTAWEVQGVLGPKGV*KRAPRG
Trigger: CCCCCGAGGCGCCCTCTTCAAGACCCCTTTTGGACC...CAGGACCCCCTGCACTTCCCAAGCAGTGAGCGCACACCCAATGGGTAAGCCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CAA 90 bp CATCCCCAAAGGAGGCCAAAGGTCCATGGGCGGCAGCCATCTTTCCCCACCCCCGGCTGCCTGACACACTaGCCGCTCTCGTGTGAATCC +
Preference number: 5 (lower is better)
Translates to: HPQRRPKVHGRQPSFPTPGCLTH*PLSCES
Trigger: GGATTCACACGAGAGCGGCAAGTGTGTCAGGCAGCC...GGGGGTGGGGAAAGATGGCTGCCGCCCATGGACCTTTGGCCTCCTTTGGGGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CAA 90 bp CGGCAGCAAGAGCCCAGCCCATCTGTTTACAGGACGCTCAGCAGTTACTCCCAGCCTGGCCACACAGGCTaGCGGCAGCAAGAGCCCAGC +
Preference number: 5 (lower is better)
Translates to: RQQEPSPSVYRTLSSYSQPGHTG*RQQEPS
Trigger: GCTGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCAGG...CTGGGAGTAACTGCTGAGCGTCCTGTAAACAGATGGGCTGGGCTCTTGCTGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS GCA 90 bp TCGTATGATGGGTCCCCCATGAAGCGGCCCTTCACCACAGACGACTaGGCCACCATCTCCTCTGTGGCAGGGGGCAAGAGGCTCCACTCT +
Preference number: 5 (lower is better)
Translates to: SYDGSPMKRPFTTDD*ATISSVAGGKRLHS
Trigger: AGAGTGGAGCCTCTTGCCCCCTGCCACAGAGGAGATGGTGGCGCAGTCGTCTGTGGTGAAGGGCCGCTTCATGGGGGACCCATCATACGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CAA 90 bp ACCTGGCCACACAGGCTTGCGGCAGCAAGAGCCCAGCCCATCTGTTTACAGGACTCAACGCCCGTCGAGTaGCTAGGAGAAGCCGCCTCC +
Preference number: 5 (lower is better)
Translates to: TWPHRLAAARAQPICLQDSTPVE*LGEAAS
Trigger: GGAGGCGGCTTCTCCTAGCAACTCGACGGGCGTTGA...GTCCTGTAAACAGATGGGCTGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CAA 90 bp CAGGGAGCCAAGGTGGGCTGCCTGACACACTTGCCGCTCTCGTGTGAATCCAAGTCAACGCCCGTCGAGTaGCTAGGAGAAGCCGCCTCC +
Preference number: 5 (lower is better)
Translates to: QGAKVGCLTHLPLSCESKSTPVE*LGEAAS
Trigger: GGAGGCGGCTTCTCCTAGCAACTCGACGGGCGTTGA...CTTGGATTCACACGAGAGCGGCAAGTGTGTCAGGCAGCCCACCTTGGCTCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CAA 90 bp CCCTGGCCATCCCCAAAGGAGGCCAAAGGTCCATGGGCGGCAGCCATCTTTCCCACGGGCCCTTACCCCTaGATTCCCATCACAGGTTGG +
Preference number: 5 (lower is better)
Translates to: PWPSPKEAKGPWAAAIFPTGPYP*IPITGW
Trigger: CCAACCTGTGATGGGAATCAAGGGGTAAGGGCCCGT...GGGAAAGATGGCTGCCGCCCATGGACCTTTGGCCTCCTTTGGGGATGGCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CAA 90 bp CGGCAGCAAGAGCCCAGCCCATCTGTTTACAGGACGCTCAGCAGTTACTCCCAGGTGTGCGCTCACTGCTaGGGAAGTGCAGGGGGTCCT +
Preference number: 5 (lower is better)
Translates to: RQQEPSPSVYRTLSSYSQVCAHC*GSAGGP
Trigger: AGGACCCCCTGCACTTCCCAAGCAGTGAGCGCACAC...CTGGGAGTAACTGCTGAGCGTCCTGTAAACAGATGGGCTGGGCTCTTGCTGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CAA 90 bp CCCTGGCCATCCCCAAAGGAGGCCAAAGGTCCATGGGCGGCAGCCATCTTTCCCCTCACAGGCACCTCTTaGTTCTCCCTCCACAGGTAC +
Preference number: 5 (lower is better)
Translates to: PWPSPKEAKGPWAAAIFPLTGTS*FSLHRY
Trigger: GTACCTGTGGAGGGAGAACAAAGAGGTGCCTGTGAG...GGGAAAGATGGCTGCCGCCCATGGACCTTTGGCCTCCTTTGGGGATGGCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CAA 90 bp AGCCTTACATCAGCTCTTCTCGCCCCATGGCTGAGGCCAGAGAGGAATGATCTGCCTGGCCACACAGGCTaGCGGCAGCAAGAGCCCAGC +
Preference number: 5 (lower is better)
Translates to: SLTSALLAPWLRPERNDLPGHTG*RQQEPS
Trigger: GCTGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCAGG...CAGATCATTCCTCTCTGGCCTCAGCCATGGGGCGAGAAGAGCTGATGTAAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CAA 90 bp GTAAAACCCAATCCTAGCCGGCATGAGCCACTTTTCTGGGAACTATCAGGGCCCGGTCCAAAAGGGGTCTaGAAGAGGGCGCCTCGGGGG +
Preference number: 5 (lower is better)
Translates to: VKPNPSRHEPLFWELSGPGPKGV*KRAPRG
Trigger: CCCCCGAGGCGCCCTCTTCAAGACCCCTTTTGGACC...GGGCCCTGATAGTTCCCAGAAAAGTGGCTCATGCCGGCTAGGATTGGGTTTTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CAA 90 bp ACTTGCCGCTCTCGTGTGAATCCAAGAAACTGCGTTCCTCAAAGGGGCCCTGGTGTGTGCGCTCACTGCTaGGGAAGTGCAGGGGGTCCT +
Preference number: 5 (lower is better)
Translates to: TCRSRVNPRNCVPQRGPGVCAHC*GSAGGP
Trigger: AGGACCCCCTGCACTTCCCAAGCAGTGAGCGCACAC...ACCAGGGCCCCTTTGAGGAACGCAGTTTCTTGGATTCACACGAGAGCGGCAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CAA 90 bp ATGGGCTTACCCATTGGGTGTGCGCTCACTGCTTGGGAAGTGCAGGGGGTCCTGCTCACAGGCACCTCTTaGTTCTCCCTCCACAGGTAC +
Preference number: 5 (lower is better)
Translates to: MGLPIGCALTAWEVQGVLLTGTS*FSLHRY
Trigger: GTACCTGTGGAGGGAGAACAAAGAGGTGCCTGTGAG...CAGGACCCCCTGCACTTCCCAAGCAGTGAGCGCACACCCAATGGGTAAGCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS TCA 90 bp CCTTCTGCAGCTCAGTGTGTTCATATTCGTATGATGGGTCCCCCATaGAGCGGCCCTTCACCACAGACGACTGCGCCACCATCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: PSAAQCVHIRMMGPP*SGPSPQTTAPPSPL
Trigger: CAGAGGAGATGGTGGCGCAGTCGTCTGTGGTGAAGGGCCGCTTCATGGGGGACCCATCATACGAATATGAACACACTGAGCTGCAGAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS CCA 90 bp TTGAAGAGGGCGCCTCGGGGGATGATGGCCACAGCCTTGTCAATCTaGTCAATGACAGACACCAAGCGGGTCTCTTCCTTGATCTGGACC +
Preference number: 5 (lower is better)
Translates to: LKRAPRGMMATALSI*SMTDTKRVSSLIWT
Trigger: GGTCCAGATCAAGGAAGAGACCCGCTTGGTGTCTGTCATTGACCAGATTGACAAGGCTGTGGCCATCATCCCCCGAGGCGCCCTCTTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372163.5
CDS-3UTR CAA 90 bp ACCTGGCCACACAGGCTTGCGGCAGCAAGAGCCCAGCCCATCTGTTTACAGGACCCTTCAAAGGTCCGATaGACATGGGTGGGTCCAAAA +
Preference number: 5 (lower is better)
Translates to: TWPHRLAAARAQPICLQDPSKVR*TWVGPK
Trigger: TTTTGGACCCACCCATGTCAATCGGACCTTTGAAGG...GTCCTGTAAACAGATGGGCTGGGCTCTTGCTGCCGCAAGCCTGTGTGGCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CAA 90 bp CTGGTGAAAGGATTTGCTTGCCCAACCGTGGCCTGGCCTGAGGAGGTAGTGCTCACTGCCTCAGACCCTTaGGGAATGTCATGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: LVKGFACPTVAWPEEVVLTASDP*GMSCSK
Trigger: CTTGGAGCATGACATTCCCAAAGGGTCTGAGGCAGT...GAGCACTACCTCCTCAGGCCAGGCCACGGTTGGGCAAGCAAATCCTTTCACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372165.8
CDS-3UTR CAA 90 bp CAGAGAGGAATGATCTGCTCTTCAGGCAGCCTCTTCGCCACCTTTTCCTCAGCAGGCTGCCTGACACACTaGCCGCTCTCGTGTGAATCC +
Preference number: 5 (lower is better)
Translates to: QRGMICSSGSLFATFSSAGCLTH*PLSCES
Trigger: GGATTCACACGAGAGCGGCAAGTGTGTCAGGCAGCC...TGCTGAGGAAAAGGTGGCGAAGAGGCTGCCTGAAGAGCAGATCATTCCTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CAA 90 bp TTCATGACAGCTGTGAGCTCCTTACTGTGGGAGAGCTGCAGGGAGCCAAGGTGGTCATGGGCTTACCCATaGGGTGTGCGCTCACTGCTT +
Preference number: 5 (lower is better)
Translates to: FMTAVSSLLWESCREPRWSWAYP*GVRSLL
Trigger: AAGCAGTGAGCGCACACCCAATGGGTAAGCCCATGA...CCACCTTGGCTCCCTGCAGCTCTCCCACAGTAAGGAGCTCACAGCTGTCATGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CAA 90 bp TTGCCGCTCTCGTGTGAATCCAAGAAACTGCGTTCCTCAAAGGGGCCCTGGTTGACGGGCCCTTACCCCTaGATTCCCATCACAGGTTGG +
Preference number: 5 (lower is better)
Translates to: LPLSCESKKLRSSKGPWLTGPYP*IPITGW
Trigger: CCAACCTGTGATGGGAATCAAGGGGTAAGGGCCCGT...CAACCAGGGCCCCTTTGAGGAACGCAGTTTCTTGGATTCACACGAGAGCGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS TCA 90 bp GGATGCTCCAGGACCCTTTGGGAATGTCATGCTCCAAGGAGTCCATaGAATCCAGGGAGGGGTCCAGGTCAGCCTTCTCAAGCAAGGTCT +
Preference number: 5 (lower is better)
Translates to: GCSRTLWECHAPRSP*NPGRGPGQPSQARS
Trigger: AGACCTTGCTTGAGAAGGCTGACCTGGACCCCTCCCTGGATTTCATGGACTCCTTGGAGCATGACATTCCCAAAGGGTCCTGGAGCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372163.5
CDS-3UTR CAA 90 bp ATGGGCTTACCCATTGGGTGTGCGCTCACTGCTTGGGAAGTGCAGGGGGTCCTGGGGCCAATGAGTCAATaGAATTCATGGGCCAAACAG +
Preference number: 5 (lower is better)
Translates to: MGLPIGCALTAWEVQGVLGPMSQ*NSWAKQ
Trigger: CTGTTTGGCCCATGAATTCAATTGACTCATTGGCCC...CAGGACCCCCTGCACTTCCCAAGCAGTGAGCGCACACCCAATGGGTAAGCCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CAA 90 bp TCCCTGGCTCAGTGGGCCTTTCAGAATCTGGAACCAGACGGAGGTGGAGTTAAGTCATGGGCTTACCCATaGGGTGTGCGCTCACTGCTT +
Preference number: 5 (lower is better)
Translates to: SLAQWAFQNLEPDGGGVKSWAYP*GVRSLL
Trigger: AAGCAGTGAGCGCACACCCAATGGGTAAGCCCATGA...CTTAACTCCACCTCCGTCTGGTTCCAGATTCTGAAAGGCCCACTGAGCCAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CAA 90 bp CATCCTCTTCATGACAGCTGTGAGCTCCTTACTGTGGGAGAGCTGCAGGGAGCCATGCTCCAGGACCCTTaGGGAATGTCATGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: HPLHDSCELLTVGELQGAMLQDP*GMSCSK
Trigger: CTTGGAGCATGACATTCCCAAAGGGTCCTGGAGCAT...GGCTCCCTGCAGCTCTCCCACAGTAAGGAGCTCACAGCTGTCATGAAGAGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372163.5
CDS TCA 90 bp CAACTGCCTCAGACCCTTTGGGAATGTCATGCTCCAAGGAGTCCATaGAATCCAGGGAGGGGTCCAGGTCAGCCTTCTCAAGCAAGGTCT +
Preference number: 5 (lower is better)
Translates to: QLPQTLWECHAPRSP*NPGRGPGQPSQARS
Trigger: AGACCTTGCTTGAGAAGGCTGACCTGGACCCCTCCCTGGATTTCATGGACTCCTTGGAGCATGACATTCCCAAAGGGTCTGAGGCAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372165.8
CDS-3UTR CAA 90 bp TGGGTTCATGGGCTTACCCATTGGGTGTGCGCTCACTGCTTGGGAAGTGCAGGGGGGCCAATGAGTCAATaGAATTCATGGGCCAAACAG +
Preference number: 5 (lower is better)
Translates to: WVHGLTHWVCAHCLGSAGGPMSQ*NSWAKQ
Trigger: CTGTTTGGCCCATGAATTCAATTGACTCATTGGCCC...CCCTGCACTTCCCAAGCAGTGAGCGCACACCCAATGGGTAAGCCCATGAACCCA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CAA 90 bp CTAGCCGGCATGAGCCACTTTTCTGGGAACTATCAGGGCCCTGGCCATCCCCAAATGATGGCCACAGCCTaGTCAATCACTATTTCTTCT +
Preference number: 5 (lower is better)
Translates to: LAGMSHFSGNYQGPGHPQMMATA*SITISS
Trigger: AGAAGAAATAGTGATTGACAAGGCTGTGGCCATCAT...TTGGGGATGGCCAGGGCCCTGATAGTTCCCAGAAAAGTGGCTCATGCCGGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372165.8
CDS-3UTR CAA 90 bp CACATTCCAACCCCTCTGCCACTTGGTTTAGAAATGAGCTCCCTGGCTCAGTGGCCTTCAAAGGTCCGATaGACATGGGTGGGTCCAAAA +
Preference number: 5 (lower is better)
Translates to: HIPTPLPLGLEMSSLAQWPSKVR*TWVGPK
Trigger: TTTTGGACCCACCCATGTCAATCGGACCTTTGAAGG...CCACTGAGCCAGGGAGCTCATTTCTAAACCAAGTGGCAGAGGGGTTGGAATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CAA 90 bp ACATTTACAAAGATCAAGGGAGCTTGTGGCCCTGGGCTGCCTGAACCTGGCCACAAGCGGGTCTCTTCCTaGATCTGGACCACTATTTCT +
Preference number: 5 (lower is better)
Translates to: TFTKIKGACGPGLPEPGHKRVSS*IWTTIS
Trigger: AGAAATAGTGGTCCAGATCAAGGAAGAGACCCGCTT...GTGGCCAGGTTCAGGCAGCCCAGGGCCACAAGCTCCCTTGATCTTTGTAAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372163.5
CDS-3UTR CAA 90 bp TTTACAAAGATCAAGGGAGCTTGTGGCCCTGGGCTGCCTGAACCTGGCCACACAATGATGGCCACAGCCTaGTCAATCTGGTCAATGACA +
Preference number: 5 (lower is better)
Translates to: FTKIKGACGPGLPEPGHTMMATA*SIWSMT
Trigger: TGTCATTGACCAGATTGACAAGGCTGTGGCCATCAT...TGTGTGGCCAGGTTCAGGCAGCCCAGGGCCACAAGCTCCCTTGATCTTTGTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372163.5
CDS-3UTR CAA 90 bp CGGCAGCAAGAGCCCAGCCCATCTGTTTACAGGACGCTCAGCAGTTACTCCCAGCATTTCCACCCATCGTaGTCTAGAATCTCTTTCATT +
Preference number: 5 (lower is better)
Translates to: RQQEPSPSVYRTLSSYSQHFHPS*SRISFI
Trigger: AATGAAAGAGATTCTAGACAACGATGGGTGGAAATG...CTGGGAGTAACTGCTGAGCGTCCTGTAAACAGATGGGCTGGGCTCTTGCTGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS-3UTR CAA 90 bp CTGGTGAAAGGATTTGCTTGCCCAACCGTGGCCTGGCCTGAGGAGGTAGTGCTCCATTTCCACCCATCGTaGTCTAGAATCTCTTTCATT +
Preference number: 5 (lower is better)
Translates to: LVKGFACPTVAWPEEVVLHFHPS*SRISFI
Trigger: AATGAAAGAGATTCTAGACAACGATGGGTGGAAATG...GAGCACTACCTCCTCAGGCCAGGCCACGGTTGGGCAAGCAAATCCTTTCACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS GCA 90 bp ACCACTATTTCTTCTTCAAAGACTTTTTCACCTTCATTCACCTTCTaGAGCTCAGTGTGTTCATATTCGTATGATGGGTCCCCCATGAAG +
Preference number: 5 (lower is better)
Translates to: TTISSSKTFSPSFTF*SSVCSYSYDGSPMK
Trigger: CTTCATGGGGGACCCATCATACGAATATGAACACACTGAGCTGCAGAAGGTGAATGAAGGTGAAAAAGTCTTTGAAGAAGAAATAGTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372163.5
CDS GCA 90 bp ATCACTATTTCTTCTTCAAAGACTTTTTCACCTTCATTCACCTTCTaGAGCTCAGTGTGTTCATATTCGTATGATGGGTCCCCCATGAAG +
Preference number: 5 (lower is better)
Translates to: ITISSSKTFSPSFTF*SSVCSYSYDGSPMK
Trigger: CTTCATGGGGGACCCATCATACGAATATGAACACACTGAGCTGCAGAAGGTGAATGAAGGTGAAAAAGTCTTTGAAGAAGAAATAGTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372165.8
CDS GCA 72 bp GGGTCCCCCATGAAGCGGCCCTTCACCACAGACGACTaGGCCACCATCTCCTCTGTGGCAGGGGGCAAGAGG +
Preference number: 6 (lower is better)
Translates to: GSPMKRPFTTDD*ATISSVAGGKR
Trigger: CCTCTTGCCCCCTGCCACAGAGGAGATGGTGGCGCAGTCGTCTGTGGTGAAGGGCCGCTTCATGGGGGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS CAA 90 bp AAGGTGAGGCCCGGCCAGAGCAGGCTGCGCAGCACCACCAGGGCATaGCCCCTCTCCATCTGGATGCTCCAGGACCCTCATGGACACAGA +
Preference number: 6 (lower is better)
Translates to: KVRPGQSRLRSTTRA*PLSIWMLQDPHGHR
Trigger: TCTGTGTCCATGAGGGTCCTGGAGCATCCAGATGGAGAGGGGCAATGCCCTGGTGGTGCTGCGCAGCCTGCTCTGGCCGGGCCTCACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372165.8
CDS CCA 72 bp CTGCGCAGCACCACCAGGGCATTGCCCCTCTCCATCTaGATGCTCCAGGACCCTCATGGACACAGAGCAGGA +
Preference number: 6 (lower is better)
Translates to: LRSTTRALPLSI*MLQDPHGHRAG
Trigger: TCCTGCTCTGTGTCCATGAGGGTCCTGGAGCATCCAGATGGAGAGGGGCAATGCCCTGGTGGTGCTGCGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372165.8
CDS GCA 72 bp CTCTGTGCAGTTCAGGCTATAGAGCGTCTTGCGCGGTaGGAGCTGGTCCTCACTCAGGCCCTGCGCGATGTA +
Preference number: 6 (lower is better)
Translates to: LCAVQAIERLAR*ELVLTQALRDV
Trigger: TACATCGCGCAGGGCCTGAGTGAGGACCAGCTCGCACCGCGCAAGACGCTCTATAGCCTGAACTGCACAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS CCA 72 bp CTGCGCAGCACCACCAGGGCATTGCCCCTCTCCATCTaGATGCTCCAGGACCCTTTGGGAATGTCATGCTCC +
Preference number: 6 (lower is better)
Translates to: LRSTTRALPLSI*MLQDPLGMSCS
Trigger: GGAGCATGACATTCCCAAAGGGTCCTGGAGCATCCAGATGGAGAGGGGCAATGCCCTGGTGGTGCTGCGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372163.5
CDS CCA 72 bp GCGCCTCGGGGGATGATGGCCACAGCCTTGTCAATCTaGTCAATGACAGACACCAAGCGGGTCTCTTCCTTG +
Preference number: 6 (lower is better)
Translates to: APRGMMATALSI*SMTDTKRVSSL
Trigger: CAAGGAAGAGACCCGCTTGGTGTCTGTCATTGACCAGATTGACAAGGCTGTGGCCATCATCCCCCGAGGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372163.5
CDS CAA 72 bp TTGAAGAGGGCGCCTCGGGGGATGATGGCCACAGCCTaGTCAATCTGGTCAATGACAGACACCAAGCGGGTC +
Preference number: 6 (lower is better)
Translates to: LKRAPRGMMATA*SIWSMTDTKRV
Trigger: GACCCGCTTGGTGTCTGTCATTGACCAGATTGACAAGGCTGTGGCCATCATCCCCCGAGGCGCCCTCTTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372163.5
CDS CAA 90 bp AAAGGGGTCTTGAAGAGGGCGCCTCGGGGGATGATGGCCACAGCCTaGTCAATCTGGTCAATGACAGACACCAAGCGGGTCTCTTCCTTG +
Preference number: 6 (lower is better)
Translates to: KGVLKRAPRGMMATA*SIWSMTDTKRVSSL
Trigger: CAAGGAAGAGACCCGCTTGGTGTCTGTCATTGACCAGATTGACAAGGCTGTGGCCATCATCCCCCGAGGCGCCCTCTTCAAGACCCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372163.5
CDS TCA 72 bp GCTCAGTGTGTTCATATTCGTATGATGGGTCCCCCATaGAGCGGCCCTTCACCACAGACGACTGCGCCACCA +
Preference number: 6 (lower is better)
Translates to: AQCVHIRMMGPP*SGPSPQTTAPP
Trigger: TGGTGGCGCAGTCGTCTGTGGTGAAGGGCCGCTTCATGGGGGACCCATCATACGAATATGAACACACTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS TCA 72 bp CAGACCCTTTGGGAATGTCATGCTCCAAGGAGTCCATaGAATCCAGGGAGGGGTCCAGGTCAGCCTTCTCAA +
Preference number: 6 (lower is better)
Translates to: QTLWECHAPRSP*NPGRGPGQPSQ
Trigger: TTGAGAAGGCTGACCTGGACCCCTCCCTGGATTTCATGGACTCCTTGGAGCATGACATTCCCAAAGGGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372165.8
CDS TCA 72 bp AGGACCCTTTGGGAATGTCATGCTCCAAGGAGTCCATaGAATCCAGGGAGGGGTCCAGGTCAGCCTTCTCAA +
Preference number: 6 (lower is better)
Translates to: RTLWECHAPRSP*NPGRGPGQPSQ
Trigger: TTGAGAAGGCTGACCTGGACCCCTCCCTGGATTTCATGGACTCCTTGGAGCATGACATTCCCAAAGGGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372163.5
CDS CCA 72 bp TCAGACAAGGACAGTCCTTCAAAGGTCCGATTGACATaGGTGGGTCCAAAAGGGGTCTTGAAGAGGGCGCCT +
Preference number: 6 (lower is better)
Translates to: SDKDSPSKVRLT*VGPKGVLKRAP
Trigger: AGGCGCCCTCTTCAAGACCCCTTTTGGACCCACCCATGTCAATCGGACCTTTGAAGGACTGTCCTTGTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS TCA 72 bp AAACCACACCTGCTCAGAAGCCACGTGAAGTCACCCTaGACAACTGCCTCAGACCCTTTGGGAATGTCATGC +
Preference number: 6 (lower is better)
Translates to: KPHLLRSHVKSP*TTASDPLGMSC
Trigger: GCATGACATTCCCAAAGGGTCTGAGGCAGTTGTTCAGGGTGACTTCACGTGGCTTCTGAGCAGGTGTGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372165.8
CDS TCA 72 bp ATTCACCTTCTGCAGCTCAGTGTGTTCATATTCGTATaGTGGGTCCCCCATGAAGCGGCCCTTCACCACAGA +
Preference number: 6 (lower is better)
Translates to: IHLLQLSVFIFV*WVPHEAALHHR
Trigger: TCTGTGGTGAAGGGCCGCTTCATGGGGGACCCATCATACGAATATGAACACACTGAGCTGCAGAAGGTGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS TCA 72 bp TTTAAAAACATCCAGGCTGGCTCCCATTCTATAGCATaGAGGGCAAGTCCATGTTCTTCTCGCCAGTGCCCA +
Preference number: 6 (lower is better)
Translates to: FKNIQAGSHSIA*RASPCSSRQCP
Trigger: TGGGCACTGGCGAGAAGAACATGGACTTGCCCTTCATGCTATAGAATGGGAGCCAGCCTGGATGTTTTTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8
CDS GCA 72 bp TCTTCTTCAAAGACTTTTTCACCTTCATTCACCTTCTaGAGCTCAGTGTGTTCATATTCGTATGATGGGTCC +
Preference number: 6 (lower is better)
Translates to: SSSKTFSPSFTF*SSVCSYSYDGS
Trigger: GGACCCATCATACGAATATGAACACACTGAGCTGCAGAAGGTGAATGAAGGTGAAAAAGTCTTTGAAGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372163.5
ENST00000372165.8