RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RSPH6A (Homo sapiens)

Ensembl gene IDs: ENSG00000104941

Ensembl transcript IDs: ENST00000221538.8, ENST00000597055.1, ENST00000600188.5

Found 338 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCTCCTCGCCCTCCTCCTCCTCCTCGCCCTCCTCCTCCTCCTCTGTaGCTCCCAGGGCTTGTTCCTGGGCTGCTTTCAGAGCCTGCTCCT +
Preference number: 1 (lower is better)
Translates to: SPRPPPPPRPPPPPL*LPGLVPGLLSEPAP
Trigger: AGGAGCAGGCTCTGAAAGCAGCCCAGGAACAAGCCCTGGGAGCCACAGAGGAGGAGGAGGAGGGCGAGGAGGAGGAGGAGGGCGAGGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597055.1
3UTR-3UTR CCA 90 bp GTGGCTAGAGGGTGGGCCTCAGTCATCTGTCTCCTCGCCCTCCTCCTCCTCCTCTGCTATCTACCTGCTTaGGGAAAGTGGCTAGAGGGT +
Preference number: 2 (lower is better)
Translates to: VARGWASVICLLALLLLLCYLPA*GKWLEG
Trigger: ACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCA...GAGGAGGAGGAGGAGGGCGAGGAGACAGATGACTGAGGCCCACCCTCTAGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597055.1
3UTR-3UTR GCA 90 bp TGGGCCTCAGTCATCTGTCTCCTCGCCCTCCTCCTCCTCCTCGCCCTCCTCCTCAATTTGCTATCTACCTaGTTGGGGAAAGTGGCTAGA +
Preference number: 2 (lower is better)
Translates to: WASVICLLALLLLLALLLNLLST*LGKVAR
Trigger: TCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATT...GAGGAGGAGGGCGAGGAGGAGGAGGAGGGCGAGGAGACAGATGACTGAGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597055.1
3UTR-3UTR CAA 90 bp TTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCTGTTTGCTATCTACCTGCTaGGGGAAAGTGGCTAGAGGG +
Preference number: 3 (lower is better)
Translates to: LLSTCLGKVARGWASVICLLSTC*GKVARG
Trigger: CCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAA...ACAGATGACTGAGGCCCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CCA 90 bp CTCGCCCTCCTCCTCCTCCTCGCCCTCCTCCTCCTCCTCTGTGGCTCCCAGGGCCCCCGGGCCAGAGGTTaGAGCGCACAACGGCCACTG +
Preference number: 4 (lower is better)
Translates to: LALLLLLALLLLLCGSQGPRARG*SAQRPL
Trigger: CAGTGGCCGTTGTGCGCTCCAACCTCTGGCCCGGGG...GCCCTGGGAGCCACAGAGGAGGAGGAGGAGGGCGAGGAGGAGGAGGAGGGCGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR TCA 90 bp GTGGGCCTCAGTCATCTGTCTCCTCGCCCTCCTCCTCCTCCTCGCCCTCCTCCTAGAAGCCCAGCGGGCTaGCCTGCGTGGCGGCCGAGA +
Preference number: 4 (lower is better)
Translates to: VGLSHLSPRPPPPPRPPPRSPAG*PAWRPR
Trigger: TCTCGGCCGCCACGCAGGTCAGCCCGCTGGGCTTCT...AGGAGGAGGGCGAGGAGGAGGAGGAGGGCGAGGAGACAGATGACTGAGGCCCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR GCA 90 bp CTCGCCCTCCTCCTCCTCCTCGCCCTCCTCCTCCTCCTCTGTGGCTCCCAGGGCGGTAGTTGGCCTCGTTaGCCGGGAAGGGTGGGTAGC +
Preference number: 4 (lower is better)
Translates to: LALLLLLALLLLLCGSQGGSWPR*PGRVGS
Trigger: GCTACCCACCCTTCCCGGGCAACGAGGCCAACTACC...GCCCTGGGAGCCACAGAGGAGGAGGAGGAGGGCGAGGAGGAGGAGGAGGGCGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR GCA 90 bp CTCGCCCTCCTCCTCCTCCTCGCCCTCCTCCTCCTCCTCTGTGGCTCCCAGGGCGCTCCAGCACGGGGATaGCCTCGAAGTCCGGGTTCT +
Preference number: 4 (lower is better)
Translates to: LALLLLLALLLLLCGSQGAPARG*PRSPGS
Trigger: AGAACCCGGACTTCGAGGGCATCCCCGTGCTGGAGC...GCCCTGGGAGCCACAGAGGAGGAGGAGGAGGGCGAGGAGGAGGAGGAGGGCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CCA 90 bp CTCGCCCTCCTCCTCCTCCTCGCCCTCCTCCTCCTCCTCTGTGGCTCCCAGGGCGCGGCAGGTCTCCCATaGTTCGCCAGGAGGCACAGA +
Preference number: 4 (lower is better)
Translates to: LALLLLLALLLLLCGSQGAAGLP*FARRHR
Trigger: TCTGTGCCTCCTGGCGAACCATGGGAGACCTGCCGC...GCCCTGGGAGCCACAGAGGAGGAGGAGGAGGGCGAGGAGGAGGAGGAGGGCGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CCA 90 bp TGGGCCTCAGTCATCTGTCTCCTCGCCCTCCTCCTCCTCCTCGCCCTCCTCCTCGGGCAGCCGCGTCCATaGCAGGCCCGGCTCGTTGCA +
Preference number: 4 (lower is better)
Translates to: WASVICLLALLLLLALLLGQPRP*QARLVA
Trigger: TGCAACGAGCCGGGCCTGCCATGGACGCGGCTGCCC...GAGGAGGAGGGCGAGGAGGAGGAGGAGGGCGAGGAGACAGATGACTGAGGCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR GCA 90 bp GTGGGCCTCAGTCATCTGTCTCCTCGCCCTCCTCCTCCTCCTCGCCCTCCTCCTCTCCTCGGGGTCCGCTaGCAGGGCCTGAGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: VGLSHLSPRPPPPPRPPPLLGVR*QGLSLV
Trigger: GACCAAGCTCAGGCCCTGGCAGCGGACCCCGAGGAG...AGGAGGAGGGCGAGGAGGAGGAGGAGGGCGAGGAGACAGATGACTGAGGCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR GCA 90 bp GCTTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCTGTCTCCTCGCCCTCCCCCAGCGGGCTGACCTaGGTGGCGGCCGAGATGCGG +
Preference number: 4 (lower is better)
Translates to: AWGKWLEGGPQSSVSSPSPSGLT*VAAEMR
Trigger: CCGCATCTCGGCCGCCACGCAGGTCAGCCCGCTGGG...GGAGGGCGAGGAGACAGATGACTGAGGCCCACCCTCTAGCCACTTTCCCCAAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR GCA 90 bp TGGGCCTCAGTCATCTGTCTCCTCGCCCTCCTCCTCCTCCTCGCCCTCCTCCTCACTGCGGGCAGAGGCTaGAGGACAGGCGGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: WASVICLLALLLLLALLLTAGRG*RTGGWS
Trigger: GGACCACCCGCCTGTCCTGCAGCCTCTGCCCGCAGT...GAGGAGGAGGGCGAGGAGGAGGAGGAGGGCGAGGAGACAGATGACTGAGGCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR GCA 90 bp GGGTGGGCCTCAGTCATCTGTCTCCTCGCCCTCCTCCTCCTCCTCGCCCTCCTCAAGGGTTCACCCAAGTaGAGCGGCCCTGCGGCAGGA +
Preference number: 4 (lower is better)
Translates to: GWASVICLLALLLLLALLKGSPK*SGPAAG
Trigger: TCCTGCCGCAGGGCCGCTGCACTTGGGTGAACCCTT...GAGGAGGGCGAGGAGGAGGAGGAGGGCGAGGAGACAGATGACTGAGGCCCACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR GCA 90 bp GGGTGGGCCTCAGTCATCTGTCTCCTCGCCCTCCTCCTCCTCCTCGCCCTCCTCACGGCCACTGAGTACTaGGGGCAGAGGCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: GWASVICLLALLLLLALLTATEY*GQRLQD
Trigger: GTCCTGCAGCCTCTGCCCGCAGTACTCAGTGGCCGT...GAGGAGGGCGAGGAGGAGGAGGAGGGCGAGGAGACAGATGACTGAGGCCCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CCA 90 bp CTCGCCCTCCTCCTCCTCCTCGCCCTCCTCCTCCTCCTCTGTGGCTCCCAGGGCGTTTCGCTGGGCGTCTaGAGGTATCTGCTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: LALLLLLALLLLLCGSQGVSLGV*RYLLPL
Trigger: GAGAGGCAGCAGATACCTCCAGACGCCCAGCGAAAC...GCCCTGGGAGCCACAGAGGAGGAGGAGGAGGGCGAGGAGGAGGAGGAGGGCGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CCA 90 bp CTCGCCCTCCTCCTCCTCCTCGCCCTCCTCCTCCTCCTCTGTGGCTCCCAGGGCACCACTCCCACTGCGTaGTGCGGTTCAGAGACTCCA +
Preference number: 4 (lower is better)
Translates to: LALLLLLALLLLLCGSQGTTPTA*CGSETP
Trigger: TGGAGTCTCTGAACCGCACCACGCAGTGGGAGTGGT...GCCCTGGGAGCCACAGAGGAGGAGGAGGAGGGCGAGGAGGAGGAGGAGGGCGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CCA 90 bp GCTAGAGGGTGGGCCTCAGTCATCTGTCTCCTCGCCCTCCTCCTCCTCCTCGCCCGGGCGTTCACGATCTaGGCTGGAGTGACGTGGGGC +
Preference number: 4 (lower is better)
Translates to: ARGWASVICLLALLLLLARAFTI*AGVTWG
Trigger: GCCCCACGTCACTCCAGCCCAGATCGTGAACGCCCG...GGCGAGGAGGAGGAGGAGGGCGAGGAGACAGATGACTGAGGCCCACCCTCTAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CCA 90 bp CTCGCCCTCCTCCTCCTCCTCGCCCTCCTCCTCCTCCTCTGTGGCTCCCAGGGCTTGTTGAATGGGGGCTaGCAGGGCCGGGTTGAAGCT +
Preference number: 4 (lower is better)
Translates to: LALLLLLALLLLLCGSQGLLNGG*QGRVEA
Trigger: AGCTTCAACCCGGCCCTGCCAGCCCCCATTCAACAA...GCCCTGGGAGCCACAGAGGAGGAGGAGGAGGGCGAGGAGGAGGAGGAGGGCGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR TCA 90 bp GTGGGCCTCAGTCATCTGTCTCCTCGCCCTCCTCCTCCTCCTCGCCCTCCTCCTGCATTAGGCTGGTGGTaGGCTCGGCGACCTGCATCC +
Preference number: 4 (lower is better)
Translates to: VGLSHLSPRPPPPPRPPPALGWW*ARRPAS
Trigger: GGATGCAGGTCGCCGAGCTCACCACCAGCCTAATGC...AGGAGGAGGGCGAGGAGGAGGAGGAGGGCGAGGAGACAGATGACTGAGGCCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR TCA 90 bp CTCGCCCTCCTCCTCCTCCTCGCCCTCCTCCTCCTCCTCTGTGGCTCCCAGGGCAGGATGTGCTGTGTGTaGTGCACCCAGTTGGCCATG +
Preference number: 4 (lower is better)
Translates to: LALLLLLALLLLLCGSQGRMCCV*CTQLAM
Trigger: CATGGCCAACTGGGTGCATCACACACAGCACATCCT...GCCCTGGGAGCCACAGAGGAGGAGGAGGAGGGCGAGGAGGAGGAGGAGGGCGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CCA 90 bp GTGGGCCTCAGTCATCTGTCTCCTCGCCCTCCTCCTCCTCCTCGCCCTCCTCCTGTTCACGATCTGGGCTaGAGTGACGTGGGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: VGLSHLSPRPPPPPRPPPVHDLG*SDVGQP
Trigger: CGGCTGCCCCACGTCACTCCAGCCCAGATCGTGAAC...AGGAGGAGGGCGAGGAGGAGGAGGAGGGCGAGGAGACAGATGACTGAGGCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR TCA 90 bp TTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCTGTCTCCTCGCCCTCCTCTCCGCTGCCAGGGCCTaGGCTTGGTCCCGACTGTGC +
Preference number: 4 (lower is better)
Translates to: LGKVARGWASVICLLALLSAARA*AWSRLC
Trigger: GCACAGTCGGGACCAAGCTCAGGCCCTGGCAGCGGA...GAGGAGGGCGAGGAGACAGATGACTGAGGCCCACCCTCTAGCCACTTTCCCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR TCA 90 bp TGGGCCTCAGTCATCTGTCTCCTCGCCCTCCTCCTCCTCCTCGCCCTCCTCCTCCGCCTCCACTCCGGGTaGACAGCGCCTTCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: WASVICLLALLLLLALLLRLHSG*TAPSVS
Trigger: AGAAACAGAAGGCGCTGTTCACCCGGAGTGGAGGCG...GAGGAGGAGGGCGAGGAGGAGGAGGAGGGCGAGGAGACAGATGACTGAGGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR GCA 90 bp TGGGCCTCAGTCATCTGTCTCCTCGCCCTCCTCCTCCTCCTCGCCCTCCTCCTCAGGCTGCTTTGGCCCTaGTGGAGCCGCTGCAGCATT +
Preference number: 4 (lower is better)
Translates to: WASVICLLALLLLLALLLRLLWP*WSRCSI
Trigger: AATGCTGCAGCGGCTCCAGCAGGGCCAAAGCAGCCT...GAGGAGGAGGGCGAGGAGGAGGAGGAGGGCGAGGAGACAGATGACTGAGGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR GCA 90 bp GCTAGAGGGTGGGCCTCAGTCATCTGTCTCCTCGCCCTCCTCCTCCTCCTCGCCGTTGCTGGAACAGGCTaGTTTGGCCCTGCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: ARGWASVICLLALLLLLAVAGTG*FGPAGA
Trigger: GGCTCCAGCAGGGCCAAAGCAGCCTGTTCCAGCAAC...GGCGAGGAGGAGGAGGAGGGCGAGGAGACAGATGACTGAGGCCCACCCTCTAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CCA 90 bp TTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCTGTCTCCTCGCCCTCCTCAGCGGCTCTCCTCCTTaGGGATCACGGGCGGCGGCT +
Preference number: 4 (lower is better)
Translates to: LGKVARGWASVICLLALLSGSPP*GSRAAA
Trigger: AGCCGCCGCCCGTGATCCCCAAGGAGGAGAGCCGCT...GAGGAGGGCGAGGAGACAGATGACTGAGGCCCACCCTCTAGCCACTTTCCCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CCA 90 bp GGGTGGGCCTCAGTCATCTGTCTCCTCGCCCTCCTCCTCCTCCTCGCCCTCCTCTGGGTAGCTGACGACTaGCGTGTCCAGGTAGCCTGT +
Preference number: 4 (lower is better)
Translates to: GWASVICLLALLLLLALLWVADD*RVQVAC
Trigger: ACAGGCTACCTGGACACGCCAGTCGTCAGCTACCCA...GAGGAGGGCGAGGAGGAGGAGGAGGGCGAGGAGACAGATGACTGAGGCCCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR TCA 90 bp TGGGCCTCAGTCATCTGTCTCCTCGCCCTCCTCCTCCTCCTCGCCCTCCTCCTCCCAGGTAGCTGCGTTTaGTTCCCAGGATCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: WASVICLLALLLLLALLLPGSCV*FPGSCP
Trigger: GGGGCAAGATCCTGGGAATCAAACGCAGCTACCTGG...GAGGAGGAGGGCGAGGAGGAGGAGGAGGGCGAGGAGACAGATGACTGAGGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR TCA 90 bp TTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCTGTCTCCTCGCCCTCCTCCTGGCAGGGCCGGGTTaGAGCTCTCGGGGCTGTACT +
Preference number: 4 (lower is better)
Translates to: LGKVARGWASVICLLALLLAGPG*SSRGCT
Trigger: AGTACAGCCCCGAGAGCTTCAACCCGGCCCTGCCAG...GAGGAGGGCGAGGAGACAGATGACTGAGGCCCACCCTCTAGCCACTTTCCCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR TCA 90 bp TGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCTGTCTCCTCGCCCTCCTCCCTGGGGTACTCTTGTTaGATGGGGGCTGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: WGKWLEGGPQSSVSSPSSLGYSC*MGAGRA
Trigger: GGCCCTGCCAGCCCCCATTCAACAAGAGTACCCCAG...GGAGGAGGGCGAGGAGACAGATGACTGAGGCCCACCCTCTAGCCACTTTCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CCA 90 bp GCTTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCTGTCTCCTCGCCCTCCCGGGCTTCCTCAGCCTaGAAGACCTGGGGCATCAGC +
Preference number: 4 (lower is better)
Translates to: AWGKWLEGGPQSSVSSPSRASSA*KTWGIS
Trigger: GCTGATGCCCCAGGTCTTCCAGGCTGAGGAAGCCCG...GGAGGGCGAGGAGACAGATGACTGAGGCCCACCCTCTAGCCACTTTCCCCAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CCA 90 bp GCTTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCTGTCTCCTCGCCCTCCGTTGCCCGGGAAGGGTaGGTAGCTGACGACTGGCGT +
Preference number: 4 (lower is better)
Translates to: AWGKWLEGGPQSSVSSPSVAREG*VADDWR
Trigger: ACGCCAGTCGTCAGCTACCCACCCTTCCCGGGCAAC...GGAGGGCGAGGAGACAGATGACTGAGGCCCACCCTCTAGCCACTTTCCCCAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR TCA 90 bp TATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCTGTCTCCCGATCTGGGCTGGAGTaGCGTGGGGCAGCCGCGTCC +
Preference number: 4 (lower is better)
Translates to: YLPAWGKWLEGGPQSSVSRSGLE*RGAAAS
Trigger: GGACGCGGCTGCCCCACGTCACTCCAGCCCAGATCG...GGAGACAGATGACTGAGGCCCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR GCA 90 bp TGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCTGTCTCCTCGCCCTCCTCCCAGATGGGTACTCCATaGCACCCAGCCGGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: WGKWLEGGPQSSVSSPSSQMGTP*HPAGLP
Trigger: AGGAAGCCCGGCTGGGTGGCATGGAGTACCCATCTG...GGAGGAGGGCGAGGAGACAGATGACTGAGGCCCACCCTCTAGCCACTTTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR GCA 90 bp TATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCTGTCTCCGCGTGGCGGCCGAGATaGGGGCTATCTGGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: YLPAWGKWLEGGPQSSVSAWRPR*GLSGPA
Trigger: TGCGGGCCCAGATAGCCCGCATCTCGGCCGCCACGC...GGAGACAGATGACTGAGGCCCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CCA 90 bp TGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCTGTCTCCTCGCCCTCCTCCCTGCTTTGGCCCTGCTaGAGCCGCTGCAGCATTAGG +
Preference number: 4 (lower is better)
Translates to: WGKWLEGGPQSSVSSPSSLLWPC*SRCSIR
Trigger: CCTAATGCTGCAGCGGCTCCAGCAGGGCCAAAGCAG...GGAGGAGGGCGAGGAGACAGATGACTGAGGCCCACCCTCTAGCCACTTTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CCA 90 bp TGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCTGTCTCCTCGCCCTCCTCCGTGTCCAGCTTGGGGTaGAACCACTCCCACTGCGTG +
Preference number: 4 (lower is better)
Translates to: WGKWLEGGPQSSVSSPSSVSSLG*NHSHCV
Trigger: CACGCAGTGGGAGTGGTTCCACCCCAAGCTGGACAC...GGAGGAGGGCGAGGAGACAGATGACTGAGGCCCACCCTCTAGCCACTTTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CCA 90 bp GCTTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCTGTCTCCTCGCCCTCCGCACCCAGTTGGCCATaGAGTCGACCAGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: AWGKWLEGGPQSSVSSPSAPSWP*SRPAPA
Trigger: TGCTGGAGCTGGTCGACTCCATGGCCAACTGGGTGC...GGAGGGCGAGGAGACAGATGACTGAGGCCCACCCTCTAGCCACTTTCCCCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CCA 90 bp GCTTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCTGTCTCCTCGCCCTCCGGTACTCTTGTTGAATaGGGGCTGGCAGGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: AWGKWLEGGPQSSVSSPSGTLVE*GLAGPG
Trigger: ACCCGGCCCTGCCAGCCCCCATTCAACAAGAGTACC...GGAGGGCGAGGAGACAGATGACTGAGGCCCACCCTCTAGCCACTTTCCCCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR GCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGCCCAGCGGGCTGACCTaGGTGGCGGCCGAGATGCGG +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWPSGLT*VAAEMR
Trigger: CCGCATCTCGGCCGCCACGCAGGTCAGCCCGCTGGG...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR GCA 90 bp TGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCTGTCTCCTCGCCCTCCTCCGGCTTGTTCCTGGGCTaGTTTCAGAGCCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: WGKWLEGGPQSSVSSPSSGLFLG*FQSLLL
Trigger: GAGGAGCAGGCTCTGAAAGCAGCCCAGGAACAAGCC...GGAGGAGGGCGAGGAGACAGATGACTGAGGCCCACCCTCTAGCCACTTTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CCA 90 bp TTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCTGTCTCCTCGCCCTCCTCCAGAAGCGACAGGTGTaGATGGGCTGCTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: LGKVARGWASVICLLALLQKRQV*MGCCST
Trigger: GGTGGAGCAGCAGCCCATCCACACCTGTCGCTTCTG...GAGGAGGGCGAGGAGACAGATGACTGAGGCCCACCCTCTAGCCACTTTCCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CCA 90 bp TATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCTGTCTCCTGGGCTGGAGTGACGTaGGGCAGCCGCGTCCATGGC +
Preference number: 4 (lower is better)
Translates to: YLPAWGKWLEGGPQSSVSWAGVT*GSRVHG
Trigger: GCCATGGACGCGGCTGCCCCACGTCACTCCAGCCCA...GGAGACAGATGACTGAGGCCCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CCA 90 bp TGGGCCTCAGTCATCTGTCTCCTCGCCCTCCTCCTCCTCCTCGCCCTCCTCCTCAAAGTGGCTAGAGGGTaGGCCTCAGTCATCTGTCTC +
Preference number: 4 (lower is better)
Translates to: WASVICLLALLLLLALLLKVARG*ASVICL
Trigger: GAGACAGATGACTGAGGCCCACCCTCTAGCCACTTT...GAGGAGGAGGGCGAGGAGGAGGAGGAGGGCGAGGAGACAGATGACTGAGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CCA 90 bp GCTAGAGGGTGGGCCTCAGTCATCTGTCTCCTCGCCCTCCTCCTCCTCCTCGCCTTCTCAAATTGCCACTaGCATAGGCATAGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: ARGWASVICLLALLLLLAFSNCH*HRHRPR
Trigger: CCGGGGCCTATGCCTATGCCAGTGGCAATTTGAGAA...GGCGAGGAGGAGGAGGAGGGCGAGGAGACAGATGACTGAGGCCCACCCTCTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR TCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGCGCCTCTGGGAGGCCTaGGAAGTCCTCCGGCCCGGA +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWRLWEA*EVLRPG
Trigger: TCCGGGCCGGAGGACTTCTCAGGCCTCCCAGAGGCG...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS-3UTR TCA 90 bp TTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCTGTCTCCTCGCCCTCCTCCTGAGGCTGGAACTCTaGGGGAAAGCCCGTGTTCAC +
Preference number: 4 (lower is better)
Translates to: LGKVARGWASVICLLALLLRLEL*GKARVH
Trigger: GTGAACACGGGCTTTCCCTCAGAGTTCCAGCCTCAG...GAGGAGGGCGAGGAGACAGATGACTGAGGCCCACCCTCTAGCCACTTTCCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR TCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGCGATCTGGGCTGGAGTaGCGTGGGGCAGCCGCGTCC +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWRSGLE*RGAAAS
Trigger: GGACGCGGCTGCCCCACGTCACTCCAGCCCAGATCG...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR TCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGAGAAGCCCAGCGGGCTaGCCTGCGTGGCGGCCGAGA +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWRSPAG*PAWRPR
Trigger: TCTCGGCCGCCACGCAGGTCAGCCCGCTGGGCTTCT...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR GCA 90 bp TTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCTGTCTCCTCGCCCTCCTCCAGGTGTGGATGGGCTaGTGCTCCACCAGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: LGKVARGWASVICLLALLQVWMG*CSTSCF
Trigger: GAAACAGCTGGTGGAGCAGCAGCCCATCCACACCTG...GAGGAGGGCGAGGAGACAGATGACTGAGGCCCACCCTCTAGCCACTTTCCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR GCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCGTGGCGGCCGAGATaGGGGCTATCTGGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWAWRPR*GLSGPA
Trigger: TGCGGGCCCAGATAGCCCGCATCTCGGCCGCCACGC...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR GCA 90 bp GTGGGCCTCAGTCATCTGTCTCCTCGCCCTCCTCCTCCTCCTCGCCCTCCTCCTTCCTCCTCTGTCTTCTaGAAAGGGTTCACCCAAGTG +
Preference number: 4 (lower is better)
Translates to: VGLSHLSPRPPPPPRPPPSSSVF*KGFTQV
Trigger: CACTTGGGTGAACCCTTTGCAGAAGACAGAGGAGGA...AGGAGGAGGGCGAGGAGGAGGAGGAGGGCGAGGAGACAGATGACTGAGGCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR GCA 90 bp TGGGCCTCAGTCATCTGTCTCCTCGCCCTCCTCCTCCTCCTCGCCCTCCTCCTCGTCCAGGGTGCCAGGTaGATGATTTCTGCATCTTCT +
Preference number: 4 (lower is better)
Translates to: WASVICLLALLLLLALLLVQGAR*MISASS
Trigger: AGAAGATGCAGAAATCATGCACCTGGCACCCTGGAC...GAGGAGGAGGGCGAGGAGGAGGAGGAGGGCGAGGAGACAGATGACTGAGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CCA 90 bp GCTAGAGGGTGGGCCTCAGTCATCTGTCTCCTCGCCCTCCTCCTCCTCCTCGCCGCTGGTTCAGGATCTTaGTCAGCAGATTCACCAGGT +
Preference number: 4 (lower is better)
Translates to: ARGWASVICLLALLLLLAAGSGS*SADSPG
Trigger: ACCTGGTGAATCTGCTGACCAAGATCCTGAACCAGC...GGCGAGGAGGAGGAGGAGGGCGAGGAGACAGATGACTGAGGCCCACCCTCTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CCA 90 bp TTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCTGTCTCCTCGCCCTCCTCCATGATGTTGGGCACTaGTGTCTCCCCCACCTCCTC +
Preference number: 4 (lower is better)
Translates to: LGKVARGWASVICLLALLHDVGH*CLPHLL
Trigger: GAGGAGGTGGGGGAGACACCAGTGCCCAACATCATG...GAGGAGGGCGAGGAGACAGATGACTGAGGCCCACCCTCTAGCCACTTTCCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGGGCAGCCGCGTCCATaGCAGGCCCGGCTCGTTGCA +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWGQPRP*QARLVA
Trigger: TGCAACGAGCCGGGCCTGCCATGGACGCGGCTGCCC...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp TATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCTGTCTCCTGCAGGACAGGCGGGTaGTCCAGGGTGCCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: YLPAWGKWLEGGPQSSVSCRTGG*SRVPGA
Trigger: TGCACCTGGCACCCTGGACCACCCGCCTGTCCTGCA...GGAGACAGATGACTGAGGCCCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR TCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGACACCGCCGGTTTCTaGGCACCGAGAGAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWDTAGF*APREGA
Trigger: GGCCCCCTCTCTCGGTGCTCAGAAACCGGCGGTGTC...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000221538.8
CDS-3UTR TCA 90 bp GCTAGAGGGTGGGCCTCAGTCATCTGTCTCCTCGCCCTCCTCCTCCTCCTCGCCAGGGTGCCAGGTGCATaGTTTCTGCATCTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: ARGWASVICLLALLLLLARVPGA*FLHLLK
Trigger: TTTCAGAAGATGCAGAAATCATGCACCTGGCACCCT...GGCGAGGAGGAGGAGGAGGGCGAGGAGACAGATGACTGAGGCCCACCCTCTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR GCA 90 bp TTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCTGTCTCCTCGCCCTCCTCGTGAGCTCGGCGACCTaGATCCTGCTTTCATCAGAG +
Preference number: 4 (lower is better)
Translates to: LGKVARGWASVICLLALLVSSAT*ILLSSE
Trigger: CTCTGATGAAAGCAGGATGCAGGTCGCCGAGCTCAC...GAGGAGGGCGAGGAGACAGATGACTGAGGCCCACCCTCTAGCCACTTTCCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR GCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGACTGCGGGCAGAGGCTaGAGGACAGGCGGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWTAGRG*RTGGWS
Trigger: GGACCACCCGCCTGTCCTGCAGCCTCTGCCCGCAGT...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGAGCGGCTCTCCTCCTTaGGGATCACGGGCGGCGGCT +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWSGSPP*GSRAAA
Trigger: AGCCGCCGCCCGTGATCCCCAAGGAGGAGAGCCGCT...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGTGGGCTGGAGTGACGTaGGGCAGCCGCGTCCATGGC +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWWAGVT*GSRVHG
Trigger: GCCATGGACGCGGCTGCCCCACGTCACTCCAGCCCA...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGGGCCCGCAGGTAGTTaGCCTCGTTGCCCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWGPAGS*PRCPGR
Trigger: CCTTCCCGGGCAACGAGGCCAACTACCTGCGGGCCC...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp AATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCGGGCCCGCAGGTAGTTaGCCTCGTTGCCCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: NLLSTCLGKVARGWASVIGPAGS*PRCPGR
Trigger: CCTTCCCGGGCAACGAGGCCAACTACCTGCGGGCCC...GATGACTGAGGCCCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGCCCCGGGCCAGAGGTTaGAGCGCACAACGGCCACTG +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWPRARG*SAQRPL
Trigger: CAGTGGCCGTTGTGCGCTCCAACCTCTGGCCCGGGG...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR TCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGCAGGCTGCCCCTCTGTaGCCAACCAGGGGCGTTTCG +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWQAAPL*PTRGVS
Trigger: CGAAACGCCCCTGGTTGGTCACAGAGGGGCAGCCTG...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS-3UTR TCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCGCACAACGGCCACTaGGTACTGCGGGCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWAHNGH*VLRAEA
Trigger: AGCCTCTGCCCGCAGTACTCAGTGGCCGTTGTGCGC...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR TCA 90 bp AATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCGCGCACAACGGCCACTaGGTACTGCGGGCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: NLLSTCLGKVARGWASVIAHNGH*VLRAEA
Trigger: AGCCTCTGCCCGCAGTACTCAGTGGCCGTTGTGCGC...GATGACTGAGGCCCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR TCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGCTGGCAGGGCCGGGTTaGAGCTCTCGGGGCTGTACT +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWLAGPG*SSRGCT
Trigger: AGTACAGCCCCGAGAGCTTCAACCCGGCCCTGCCAG...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR GCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCCCCAGCGGGCTGACCTaGGTGGCGGCCGAGATGCGG +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGPSGLT*VAAEMR
Trigger: CCGCATCTCGGCCGCCACGCAGGTCAGCCCGCTGGG...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR GCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGAGCTGGCTCCCATGTaGCTGGCCCTGTGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWELAPM*LALCLV
Trigger: CACCAGGCACAGGGCCAGGCACATGGGAGCCAGCTC...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600188.5
CDS-3UTR GCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGCCAGGTGCTCGTACCTaGCTCCCGCAGGAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWPGART*LPQEEW
Trigger: CCACTCCTCCTGCGGGAGGCAGGTACGAGCACCTGG...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600188.5
CDS-3UTR CCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCCCAAGGGGTTGACTaGGGGCTCCTGGAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWAQGVD*GLLEGG
Trigger: CCCACCTTCCAGGAGCCCCCAGTCAACCCCTTGGGC...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS-3UTR CCA 90 bp TTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCTGTGCAGCAGGTAGGCCTTaGCGTTCTGCACGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LLSTCLGKVARGWASVICAAGRP*RSARPA
Trigger: AGCTGGCCGTGCAGAACGCCAAGGCCTACCTGCTGC...ACAGATGACTGAGGCCCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CCA 90 bp TGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCTGTCCCGCCATCTTGTAGGTaGGCTGCATCTCGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: CYLPAWGKWLEGGPQSSVPPSCR*AASRGR
Trigger: ACGACCCCGAGATGCAGCCCACCTACAAGATGGCGG...GACAGATGACTGAGGCCCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGCGGGCGTTCACGATCTaGGCTGGAGTGACGTGGGGC +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWRAFTI*AGVTWG
Trigger: GCCCCACGTCACTCCAGCCCAGATCGTGAACGCCCG...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGTGCAGGACAGGCGGGTaGTCCAGGGTGCCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWCRTGG*SRVPGA
Trigger: TGCACCTGGCACCCTGGACCACCCGCCTGTCCTGCA...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp TGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCTGTCCCTGCTTGGGGAAAGTaGCTAGAGGGTGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: CYLPAWGKWLEGGPQSSVPAWGK*LEGGPQ
Trigger: CTGAGGCCCACCCTCTAGCCACTTTCCCCAAGCAGG...GACAGATGACTGAGGCCCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR TCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGTACTTGTTGGCGCCTaGGCGGCTCTCCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWVLVGA*AALLLG
Trigger: CCCAAGGAGGAGAGCCGCTCAGGCGCCAACAAGTAC...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR TCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCCGATCTGGGCTGGAGTaGCGTGGGGCAGCCGCGTCC +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGRSGLE*RGAAAS
Trigger: GGACGCGGCTGCCCCACGTCACTCCAGCCCAGATCG...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR TCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGGAAGGGTGGGTAGCTaGCGACTGGCGTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWGRVGS*RLACPG
Trigger: ACCTGGACACGCCAGTCGTCAGCTACCCACCCTTCC...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR TCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCAGAAGCCCAGCGGGCTaGCCTGCGTGGCGGCCGAGA +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGRSPAG*PAWRPR
Trigger: TCTCGGCCGCCACGCAGGTCAGCCCGCTGGGCTTCT...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR TCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGCTGGGGTACTCTTGTTaGATGGGGGCTGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWLGYSC*MGAGRA
Trigger: GGCCCTGCCAGCCCCCATTCAACAAGAGTACCCCAG...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR GCA 90 bp AGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCCTCATCTGGAGGTATCTGCTaGCTCTCCTCGGGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: RGNLLSTCLGKVARGWASSGGIC*LSSGSA
Trigger: AGCGGACCCCGAGGAGAGGCAGCAGATACCTCCAGA...TGAGGCCCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR GCA 90 bp AGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCCTCACCTGTTGGGACAGGCTaGCCCTCTGTGACCAACCAG +
Preference number: 4 (lower is better)
Translates to: RGNLLSTCLGKVARGWASPVGTG*PSVTNQ
Trigger: CTGGTTGGTCACAGAGGGGCAGCCTGTCCCAACAGG...TGAGGCCCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR GCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGGTAGTTGGCCTCGTTaGCCGGGAAGGGTGGGTAGC +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWGSWPR*PGRVGS
Trigger: GCTACCCACCCTTCCCGGGCAACGAGGCCAACTACC...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR GCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCGCGTGGCGGCCGAGATaGGGGCTATCTGGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGAWRPR*GLSGPA
Trigger: TGCGGGCCCAGATAGCCCGCATCTCGGCCGCCACGC...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR GCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCTCCAGCACGGGGATaGCCTCGAAGTCCGGGTTCT +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWAPARG*PRSPGS
Trigger: AGAACCCGGACTTCGAGGGCATCCCCGTGCTGGAGC...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCGGCAGGTCTCCCATaGTTCGCCAGGAGGCACAGA +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWAAGLP*FARRHR
Trigger: TCTGTGCCTCCTGGCGAACCATGGGAGACCTGCCGC...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS-3UTR CCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGCCAGGGGCGTTTCGCTaGGCGTCTGGAGGTATCTGC +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWPGAFR*ASGGIC
Trigger: GCAGATACCTCCAGACGCCCAGCGAAACGCCCCTGG...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS-3UTR CCA 90 bp AGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTGGGGTCCAGTTGCTaGAACAGGCTGCTTTGGCCC +
Preference number: 4 (lower is better)
Translates to: RGNLLSTCLGKVARGWASVGSSC*NRLLWP
Trigger: GGGCCAAAGCAGCCTGTTCCAGCAACTGGACCCCAC...TGAGGCCCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCAGCAGGTAGGCCTTaGCGTTCTGCACGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWAAGRP*RSARPA
Trigger: AGCTGGCCGTGCAGAACGCCAAGGCCTACCTGCTGC...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS-3UTR CCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCGGGCAGCCGCGTCCATaGCAGGCCCGGCTCGTTGCA +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGGQPRP*QARLVA
Trigger: TGCAACGAGCCGGGCCTGCCATGGACGCGGCTGCCC...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGTTCACGATCTGGGCTaGAGTGACGTGGGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWVHDLG*SDVGQP
Trigger: CGGCTGCCCCACGTCACTCCAGCCCAGATCGTGAAC...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGCTCAGCTCACTGAGCTaGCTCCCATGTGCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWLSSLS*LPCAWP
Trigger: GGGCCAGGCACATGGGAGCCAGCTCAGTGAGCTGAG...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600188.5
CDS-3UTR TCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTCCGCTGCCAGGGCCTaGGCTTGGTCCCGACTGTGC +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGSAARA*AWSRLC
Trigger: GCACAGTCGGGACCAAGCTCAGGCCCTGGCAGCGGA...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS-3UTR TCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGCGCCTCCACTCCGGGTaGACAGCGCCTTCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWRLHSG*TAPSVS
Trigger: AGAAACAGAAGGCGCTGTTCACCCGGAGTGGAGGCG...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR GCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCCTCCTCGGGGTCCGCTaGCAGGGCCTGAGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGLLGVR*QGLSLV
Trigger: GACCAAGCTCAGGCCCTGGCAGCGGACCCCGAGGAG...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS-3UTR GCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGTCTGGAGGTATCTGCTaGCTCTCCTCGGGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWSGGIC*LSSGSA
Trigger: AGCGGACCCCGAGGAGAGGCAGCAGATACCTCCAGA...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS-3UTR GCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGCCTGTTGGGACAGGCTaGCCCTCTGTGACCAACCAG +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWPVGTG*PSVTNQ
Trigger: CTGGTTGGTCACAGAGGGGCAGCCTGTCCCAACAGG...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS-3UTR GCA 90 bp TATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCTGTCTCCAGCAGATTCACCAGGTaGTCGTACAGGCTGAGGTCG +
Preference number: 4 (lower is better)
Translates to: YLPAWGKWLEGGPQSSVSSRFTR*SYRLRS
Trigger: CGACCTCAGCCTGTACGAGCACCTGGTGAATCTGCT...GGAGACAGATGACTGAGGCCCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR GCA 90 bp AGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCCTCATGGAACCACTCCCACTaGGTGGTGCGGTTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: RGNLLSTCLGKVARGWASWNHSH*VVRFRD
Trigger: GTCTCTGAACCGCACCACGCAGTGGGAGTGGTTCCA...TGAGGCCCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR GCA 90 bp TATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCTGTCTCCTCATGGCCAGGAAAATaGGGAAGCTCTCGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: YLPAWGKWLEGGPQSSVSSWPGK*GSSRPS
Trigger: GCTCGGACGAGAGCTTCCGCATTTTCCTGGCCATGA...GGAGACAGATGACTGAGGCCCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR GCA 90 bp TATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCTGTCTCCGTGTGGATGGGCTGCTaGTCCACCAGCTGTTTCATG +
Preference number: 4 (lower is better)
Translates to: YLPAWGKWLEGGPQSSVSVWMGC*STSCFM
Trigger: CATGAAACAGCTGGTGGAGCAGCAGCCCATCCACAC...GGAGACAGATGACTGAGGCCCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR GCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCACTGCGGGCAGAGGCTaGAGGACAGGCGGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGTAGRG*RTGGWS
Trigger: GGACCACCCGCCTGTCCTGCAGCCTCTGCCCGCAGT...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp AGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGCCCGTGTTCACAGATaGGTACTCCATGCCACCCAG +
Preference number: 4 (lower is better)
Translates to: RGNLLSTCLGKVARGWASARVHR*VLHATQ
Trigger: CTGGGTGGCATGGAGTACCCATCTGTGAACACGGGC...TGAGGCCCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGTGGGGTCCAGTTGCTaGAACAGGCTGCTTTGGCCC +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWVGSSC*NRLLWP
Trigger: GGGCCAAAGCAGCCTGTTCCAGCAACTGGACCCCAC...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS-3UTR CCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGGGTCCTCAGGCCGCTaGTTCAGGATCTTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWGSSGR*FRILVS
Trigger: GCTGACCAAGATCCTGAACCAGCGGCCTGAGGACCC...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGTGTCCAGCTTGGGGTaGAACCACTCCCACTGCGTG +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWVSSLG*NHSHCV
Trigger: CACGCAGTGGGAGTGGTTCCACCCCAAGCTGGACAC...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCAGCGTGTCCAGCTTaGGGTGGAACCACTCCCACT +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWAACPA*GGTTPT
Trigger: AGTGGGAGTGGTTCCACCCCAAGCTGGACACGCTGC...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGCCGCCATCTTGTAGGTaGGCTGCATCTCGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWPPSCR*AASRGR
Trigger: ACGACCCCGAGATGCAGCCCACCTACAAGATGGCGG...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGCAGAAGCGACAGGTGTaGATGGGCTGCTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWQKRQV*MGCCST
Trigger: GGTGGAGCAGCAGCCCATCCACACCTGTCGCTTCTG...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCACCCAGTTGGCCATaGAGTCGACCAGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWAPSWP*SRPAPA
Trigger: TGCTGGAGCTGGTCGACTCCATGGCCAACTGGGTGC...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp TGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCTGTCTGTGATGCACCCAGTTaGCCATGGAGTCGACCAGCT +
Preference number: 4 (lower is better)
Translates to: CYLPAWGKWLEGGPQSSVCDAPS*PWSRPA
Trigger: AGCTGGTCGACTCCATGGCCAACTGGGTGCATCACA...GACAGATGACTGAGGCCCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCCCCCGGGCCAGAGGTTaGAGCGCACAACGGCCACTG +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGPRARG*SAQRPL
Trigger: CAGTGGCCGTTGTGCGCTCCAACCTCTGGCCCGGGG...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGGTACTCTTGTTGAATaGGGGCTGGCAGGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWGTLVE*GLAGPG
Trigger: ACCCGGCCCTGCCAGCCCCCATTCAACAAGAGTACC...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGCCTGCTTGGGGAAAGTaGCTAGAGGGTGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWPAWGK*LEGGPQ
Trigger: CTGAGGCCCACCCTCTAGCCACTTTCCCCAAGCAGG...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR TCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGCTGAGGCTGGAACTCTaGGGGAAAGCCCGTGTTCAC +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWLRLEL*GKARVH
Trigger: GTGAACACGGGCTTTCCCTCAGAGTTCCAGCCTCAG...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS-3UTR TCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGCCAGGTAGCTGCGTTTaGTTCCCAGGATCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWPGSCV*FPGSCP
Trigger: GGGGCAAGATCCTGGGAATCAAACGCAGCTACCTGG...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR TCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCGCGCACAACGGCCACTaGGTACTGCGGGCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGAHNGH*VLRAEA
Trigger: AGCCTCTGCCCGCAGTACTCAGTGGCCGTTGTGCGC...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR TCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCCTGGCAGGGCCGGGTTaGAGCTCTCGGGGCTGTACT +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGLAGPG*SSRGCT
Trigger: AGTACAGCCCCGAGAGCTTCAACCCGGCCCTGCCAG...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR TCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGGTCACTCATCTCCATaGTCTCTGGGCCACTGGGGT +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWGHSSP*SLGHWG
Trigger: ACCCCAGTGGCCCAGAGATCATGGAGATGAGTGACC...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR GCA 90 bp TTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCTGTAAGGTGGGGTCCAGTTaGTGGAACAGGCTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: LLSTCLGKVARGWASVICKVGSS*WNRLLW
Trigger: CCAAAGCAGCCTGTTCCAGCAACTGGACCCCACCTT...ACAGATGACTGAGGCCCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR GCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGCAGGTGTGGATGGGCTaGTGCTCCACCAGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWQVWMG*CSTSCF
Trigger: GAAACAGCTGGTGGAGCAGCAGCCCATCCACACCTG...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGTTTCGCTGGGCGTCTaGAGGTATCTGCTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWVSLGV*RYLLPL
Trigger: GAGAGGCAGCAGATACCTCCAGACGCCCAGCGAAAC...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS-3UTR CCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCCCGTGTTCACAGATaGGTACTCCATGCCACCCAG +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWARVHR*VLHATQ
Trigger: CTGGGTGGCATGGAGTACCCATCTGTGAACACGGGC...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS-3UTR CCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCGCCCAAGGGGTTGACTaGGGGCTCCTGGAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGAQGVD*GLLEGG
Trigger: CCCACCTTCCAGGAGCCCCCAGTCAACCCCTTGGGC...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS-3UTR CCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGACCACTCCCACTGCGTaGTGCGGTTCAGAGACTCCA +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWTTPTA*CGSETP
Trigger: TGGAGTCTCTGAACCGCACCACGCAGTGGGAGTGGT...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGCATGATGTTGGGCACTaGTGTCTCCCCCACCTCCTC +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWHDVGH*CLPHLL
Trigger: GAGGAGGTGGGGGAGACACCAGTGCCCAACATCATG...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp AGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCCTCAAGTACAGGTACTTGTTaGCGCCTGAGCGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: RGNLLSTCLGKVARGWASSTGTC*RLSGSP
Trigger: AGGAGAGCCGCTCAGGCGCCAACAAGTACCTGTACT...TGAGGCCCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCCGGGCGTTCACGATCTaGGCTGGAGTGACGTGGGGC +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGRAFTI*AGVTWG
Trigger: GCCCCACGTCACTCCAGCCCAGATCGTGAACGCCCG...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGTGGGTAGCTGACGACTaGCGTGTCCAGGTAGCCTGT +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWWVADD*RVQVAC
Trigger: ACAGGCTACCTGGACACGCCAGTCGTCAGCTACCCA...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTGCAGGACAGGCGGGTaGTCCAGGGTGCCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGCRTGG*SRVPGA
Trigger: TGCACCTGGCACCCTGGACCACCCGCCTGTCCTGCA...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR TCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCGCATTAGGCTGGTGGTaGGCTCGGCGACCTGCATCC +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGALGWW*ARRPAS
Trigger: GGATGCAGGTCGCCGAGCTCACCACCAGCCTAATGC...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS-3UTR TCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCGTACTTGTTGGCGCCTaGGCGGCTCTCCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGVLVGA*AALLLG
Trigger: CCCAAGGAGGAGAGCCGCTCAGGCGCCAACAAGTAC...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR TCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCGGAAGGGTGGGTAGCTaGCGACTGGCGTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGGRVGS*RLACPG
Trigger: ACCTGGACACGCCAGTCGTCAGCTACCCACCCTTCC...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR TCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGAGGATGTGCTGTGTGTaGTGCACCCAGTTGGCCATG +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWRMCCV*CTQLAM
Trigger: CATGGCCAACTGGGTGCATCACACACAGCACATCCT...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR GCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCGCGTCTGGAGGTATCTaGTGCCTCTCCTCGGGGTCC +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGASGGI*CLSSGS
Trigger: GGACCCCGAGGAGAGGCAGCAGATACCTCCAGACGC...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS-3UTR GCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGTGAGCTCGGCGACCTaGATCCTGCTTTCATCAGAG +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWVSSAT*ILLSSE
Trigger: CTCTGATGAAAGCAGGATGCAGGTCGCCGAGCTCAC...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS-3UTR GCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGTCATGGCCAGGAAAATaGGGAAGCTCTCGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWSWPGK*GSSRPS
Trigger: GCTCGGACGAGAGCTTCCGCATTTTCCTGGCCATGA...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR GCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGTGTGGATGGGCTGCTaGTCCACCAGCTGTTTCATG +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWVWMGC*STSCFM
Trigger: CATGAAACAGCTGGTGGAGCAGCAGCCCATCCACAC...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR GCA 90 bp AATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCGCAGGCCCGGCTCGTTaGACACAAAGTACAGGTACT +
Preference number: 4 (lower is better)
Translates to: NLLSTCLGKVARGWASVIAGPAR*TQSTGT
Trigger: AGTACCTGTACTTTGTGTGCAACGAGCCGGGCCTGC...GATGACTGAGGCCCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR GCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCAGGCCCGGCTCGTTaGACACAAAGTACAGGTACT +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWAGPAR*TQSTGT
Trigger: AGTACCTGTACTTTGTGTGCAACGAGCCGGGCCTGC...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR GCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCGGTAGTTGGCCTCGTTaGCCGGGAAGGGTGGGTAGC +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGGSWPR*PGRVGS
Trigger: GCTACCCACCCTTCCCGGGCAACGAGGCCAACTACC...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR GCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCGCTCCAGCACGGGGATaGCCTCGAAGTCCGGGTTCT +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGAPARG*PRSPGS
Trigger: AGAACCCGGACTTCGAGGGCATCCCCGTGCTGGAGC...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR GCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCAAGGGTTCACCCAAGTaGAGCGGCCCTGCGGCAGGA +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGKGSPK*SGPAAG
Trigger: TCCTGCCGCAGGGCCGCTGCACTTGGGTGAACCCTT...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR GCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCACGGCCACTGAGTACTaGGGGCAGAGGCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGTATEY*GQRLQD
Trigger: GTCCTGCAGCCTCTGCCCGCAGTACTCAGTGGCCGT...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGAGCAAGTTCTCCTGTTaGGACAGGCTGCCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWSKFSC*DRLPLC
Trigger: ACAGAGGGGCAGCCTGTCCCAACAGGAGAACTTGCT...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS-3UTR CCA 90 bp AATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCTCAGCCTGGAAGACCTaGGGCATCAGCAAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: NLLSTCLGKVARGWASVISAWKT*GISKFS
Trigger: GGAGAACTTGCTGATGCCCCAGGTCTTCCAGGCTGA...GATGACTGAGGCCCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCCGGGCTTCCTCAGCCTaGAAGACCTGGGGCATCAGC +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGRASSA*KTWGIS
Trigger: GCTGATGCCCCAGGTCTTCCAGGCTGAGGAAGCCCG...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS-3UTR CCA 90 bp TTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCTGTCCACCAGCTGTTTCATaGCCAGGAAAATGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: LLSTCLGKVARGWASVICPPAVS*PGKCGS
Trigger: GCTTCCGCATTTTCCTGGCCATGAAACAGCTGGTGG...ACAGATGACTGAGGCCCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGAGTACAGGTACTTGTTaGCGCCTGAGCGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWSTGTC*RLSGSP
Trigger: AGGAGAGCCGCTCAGGCGCCAACAAGTACCTGTACT...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCGTTGCCCGGGAAGGGTaGGTAGCTGACGACTGGCGT +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGVAREG*VADDWR
Trigger: ACGCCAGTCGTCAGCTACCCACCCTTCCCGGGCAAC...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp TTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCTGTCATCTCCATGATCTCTaGGCCACTGGGGTACTCTTG +
Preference number: 4 (lower is better)
Translates to: LLSTCLGKVARGWASVICHLHDL*ATGVLL
Trigger: CAAGAGTACCCCAGTGGCCCAGAGATCATGGAGATG...ACAGATGACTGAGGCCCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCCTCCCGCAGGAGGAGTaGGAGGAGAGGGACCTCACT +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGLPQEE*EERDLT
Trigger: AGTGAGGTCCCTCTCCTCCCACTCCTCCTGCGGGAG...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600188.5
CDS-3UTR TCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCCGCCTCCACTCCGGGTaGACAGCGCCTTCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGRLHSG*TAPSVS
Trigger: AGAAACAGAAGGCGCTGTTCACCCGGAGTGGAGGCG...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR TCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGAGAAGGCAGTCTCCATaGTGTTGGGCACTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWRRQSP*CWALVS
Trigger: AGACACCAGTGCCCAACATCATGGAGACTGCCTTCT...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR GCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCCAGATGGGTACTCCATaGCACCCAGCCGGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGQMGTP*HPAGLP
Trigger: AGGAAGCCCGGCTGGGTGGCATGGAGTACCCATCTG...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS-3UTR GCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGCGGCGACCTGCATCCTaGTTTCATCAGAGTAAGGCT +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWRRPAS*FHQSKA
Trigger: AGCCTTACTCTGATGAAAGCAGGATGCAGGTCGCCG...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS-3UTR GCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCAGGCTGCTTTGGCCCTaGTGGAGCCGCTGCAGCATT +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGRLLWP*WSRCSI
Trigger: AATGCTGCAGCGGCTCCAGCAGGGCCAAAGCAGCCT...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS-3UTR GCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCGTTGCTGGAACAGGCTaGTTTGGCCCTGCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGVAGTG*FGPAGA
Trigger: GGCTCCAGCAGGGCCAAAGCAGCCTGTTCCAGCAAC...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS-3UTR GCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGTTCCTTTTCTATCCCTaGCCTCTGGGGACAGGAAGC +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWFLFYP*PLGTGS
Trigger: GCTTCCTGTCCCCAGAGGGCAGGGATAGAAAAGGAA...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000600188.5
CDS-3UTR CCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCCTGCTTTGGCCCTGCTaGAGCCGCTGCAGCATTAGG +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGLLWPC*SRCSIR
Trigger: CCTAATGCTGCAGCGGCTCCAGCAGGGCCAAAGCAG...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS-3UTR CCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCGTGTCCAGCTTGGGGTaGAACCACTCCCACTGCGTG +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGVSSLG*NHSHCV
Trigger: CACGCAGTGGGAGTGGTTCCACCCCAAGCTGGACAC...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCGCAGCGTGTCCAGCTTaGGGTGGAACCACTCCCACT +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGAACPA*GGTTPT
Trigger: AGTGGGAGTGGTTCCACCCCAAGCTGGACACGCTGC...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCCCGCCATCTTGTAGGTaGGCTGCATCTCGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGPPSCR*AASRGR
Trigger: ACGACCCCGAGATGCAGCCCACCTACAAGATGGCGG...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGCCACCAGCTGTTTCATaGCCAGGAAAATGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWPPAVS*PGKCGS
Trigger: GCTTCCGCATTTTCCTGGCCATGAAACAGCTGGTGG...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCCAGAAGCGACAGGTGTaGATGGGCTGCTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGQKRQV*MGCCST
Trigger: GGTGGAGCAGCAGCCCATCCACACCTGTCGCTTCTG...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGCAAACTTTTTGCCACTaGCATAGGCATAGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWQTFCH*HRHRPR
Trigger: CCGGGGCCTATGCCTATGCCAGTGGCAAAAAGTTTG...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000600188.5
CDS-3UTR CCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCGGTACTCTTGTTGAATaGGGGCTGGCAGGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGGTLVE*GLAGPG
Trigger: ACCCGGCCCTGCCAGCCCCCATTCAACAAGAGTACC...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGCATCTCCATGATCTCTaGGCCACTGGGGTACTCTTG +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWHLHDL*ATGVLL
Trigger: CAAGAGTACCCCAGTGGCCCAGAGATCATGGAGATG...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGAAAGTGGCTAGAGGGTaGGCCTCAGTCATCTGTCTC +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWKVARG*ASVICL
Trigger: GAGACAGATGACTGAGGCCCACCCTCTAGCCACTTT...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCCCTGCTTGGGGAAAGTaGCTAGAGGGTGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGPAWGK*LEGGPQ
Trigger: CTGAGGCCCACCCTCTAGCCACTTTCCCCAAGCAGG...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGTCTATCCCTGCCCTCTaGGGACAGGAAGCACATAGT +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWSIPAL*GQEAHS
Trigger: ACTATGTGCTTCCTGTCCCCAGAGGGCAGGGATAGA...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000600188.5
CDS-3UTR TCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCGGTCACTCATCTCCATaGTCTCTGGGCCACTGGGGT +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGGHSSP*SLGHWG
Trigger: ACCCCAGTGGCCCAGAGATCATGGAGATGAGTGACC...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR TCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCACTCACTCAGCTCACTaGGCTGGCTCCCATGTGCCT +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGTHSAH*AGSHVP
Trigger: AGGCACATGGGAGCCAGCTCAGTGAGCTGAGTGAGT...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600188.5
CDS-3UTR GCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTGGAACCACTCCCACTaGGTGGTGCGGTTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGWNHSH*VVRFRD
Trigger: GTCTCTGAACCGCACCACGCAGTGGGAGTGGTTCCA...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR GCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCCAGGTGTGGATGGGCTaGTGCTCCACCAGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGQVWMG*CSTSCF
Trigger: GAAACAGCTGGTGGAGCAGCAGCCCATCCACACCTG...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR GCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGTCCTCCTCTGTCTTCTaGAAAGGGTTCACCCAAGTG +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWSSSVF*KGFTQV
Trigger: CACTTGGGTGAACCCTTTGCAGAAGACAGAGGAGGA...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR GCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCGGCTTGTTCCTGGGCTaGTTTCAGAGCCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGGLFLG*FQSLLL
Trigger: GAGGAGCAGGCTCTGAAAGCAGCCCAGGAACAAGCC...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR GCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCAGCAGATTCACCAGGTaGTCGTACCTGCCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGSRFTR*SYLPPA
Trigger: TGCGGGAGGCAGGTACGAGCACCTGGTGAATCTGCT...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600188.5
CDS-3UTR CCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCTGGTTCAGGATCTTaGTCAGCAGATTCACCAGGT +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWAGSGS*SADSPG
Trigger: ACCTGGTGAATCTGCTGACCAAGATCCTGAACCAGC...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCACCACTCCCACTGCGTaGTGCGGTTCAGAGACTCCA +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGTTPTA*CGSETP
Trigger: TGGAGTCTCTGAACCGCACCACGCAGTGGGAGTGGT...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCCATGATGTTGGGCACTaGTGTCTCCCCCACCTCCTC +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGHDVGH*CLPHLL
Trigger: GAGGAGGTGGGGGAGACACCAGTGCCCAACATCATG...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTGGGTAGCTGACGACTaGCGTGTCCAGGTAGCCTGT +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGWVADD*RVQVAC
Trigger: ACAGGCTACCTGGACACGCCAGTCGTCAGCTACCCA...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTTGTTGAATGGGGGCTaGCAGGGCCGGGTTGAAGCT +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGLLNGG*QGRVEA
Trigger: AGCTTCAACCCGGCCCTGCCAGCCCCCATTCAACAA...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp AATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCTGCTATCTACCTGCTTaGGGAAAGTGGCTAGAGGGT +
Preference number: 4 (lower is better)
Translates to: NLLSTCLGKVARGWASVICYLPA*GKWLEG
Trigger: ACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCA...GATGACTGAGGCCCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR TCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCAGGATGTGCTGTGTGTaGTGCACCCAGTTGGCCATG +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGRMCCV*CTQLAM
Trigger: CATGGCCAACTGGGTGCATCACACACAGCACATCCT...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR TCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGAGGGTGCCAGGTGCATaGTTTCTGCATCTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWRVPGA*FLHLLK
Trigger: TTTCAGAAGATGCAGAAATCATGCACCTGGCACCCT...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR GCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCAAGGTGGGGTCCAGTTaGTGGAACAGGCTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGKVGSS*WNRLLW
Trigger: CCAAAGCAGCCTGTTCCAGCAACTGGACCCCACCTT...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS-3UTR GCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCAGCAGATTCACCAGGTaGTCGTACAGGCTGAGGTCG +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGSRFTR*SYRLRS
Trigger: CGACCTCAGCCTGTACGAGCACCTGGTGAATCTGCT...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS-3UTR GCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCGTGTGGATGGGCTGCTaGTCCACCAGCTGTTTCATG +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGVWMGC*STSCFM
Trigger: CATGAAACAGCTGGTGGAGCAGCAGCCCATCCACAC...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR GCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCGCAGGCCCGGCTCGTTaGACACAAAGTACAGGTACT +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGAGPAR*TQSTGT
Trigger: AGTACCTGTACTTTGTGTGCAACGAGCCGGGCCTGC...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTCAGCCTGGAAGACCTaGGGCATCAGCAAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGSAWKT*GISKFS
Trigger: GGAGAACTTGCTGATGCCCCAGGTCTTCCAGGCTGA...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS-3UTR CCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCAGTACAGGTACTTGTTaGCGCCTGAGCGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGSTGTC*RLSGSP
Trigger: AGGAGAGCCGCTCAGGCGCCAACAAGTACCTGTACT...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTGTGATGCACCCAGTTaGCCATGGAGTCGACCAGCT +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGCDAPS*PWSRPA
Trigger: AGCTGGTCGACTCCATGGCCAACTGGGTGCATCACA...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR TCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCAGAAGGCAGTCTCCATaGTGTTGGGCACTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGRRQSP*CWALVS
Trigger: AGACACCAGTGCCCAACATCATGGAGACTGCCTTCT...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR GCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCCGGCGACCTGCATCCTaGTTTCATCAGAGTAAGGCT +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGRRPAS*FHQSKA
Trigger: AGCCTTACTCTGATGAAAGCAGGATGCAGGTCGCCG...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS-3UTR GCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTTCCTTTTCTATCCCTaGCCTCTGGGGACAGGAAGC +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGFLFYP*PLGTGS
Trigger: GCTTCCTGTCCCCAGAGGGCAGGGATAGAAAAGGAA...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000600188.5
CDS-3UTR CCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCCCACCAGCTGTTTCATaGCCAGGAAAATGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGPPAVS*PGKCGS
Trigger: GCTTCCGCATTTTCCTGGCCATGAAACAGCTGGTGG...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCCATCTCCATGATCTCTaGGCCACTGGGGTACTCTTG +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGHLHDL*ATGVLL
Trigger: CAAGAGTACCCCAGTGGCCCAGAGATCATGGAGATG...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCAAAGTGGCTAGAGGGTaGGCCTCAGTCATCTGTCTC +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGKVARG*ASVICL
Trigger: GAGACAGATGACTGAGGCCCACCCTCTAGCCACTTT...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR GCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCGTCCAGGGTGCCAGGTaGATGATTTCTGCATCTTCT +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGVQGAR*MISASS
Trigger: AGAAGATGCAGAAATCATGCACCTGGCACCCTGGAC...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR GCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGTGTTCTCAAACTTTTTaGCACTGGCATAGGCATAGG +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWCSQTF*HWHRHR
Trigger: CCTATGCCTATGCCAGTGGCAAAAAGTTTGAGAACA...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000600188.5
CDS-3UTR GCA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGAATTTGCTATCTACCTaGTTGGGGAAAGTGGCTAGA +
Preference number: 4 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWNLLST*LGKVAR
Trigger: TCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATT...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCGCTGGTTCAGGATCTTaGTCAGCAGATTCACCAGGT +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGAGSGS*SADSPG
Trigger: ACCTGGTGAATCTGCTGACCAAGATCCTGAACCAGC...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTGCTATCTACCTGCTTaGGGAAAGTGGCTAGAGGGT +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGCYLPA*GKWLEG
Trigger: ACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCA...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR TCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCAGGGTGCCAGGTGCATaGTTTCTGCATCTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGRVPGA*FLHLLK
Trigger: TTTCAGAAGATGCAGAAATCATGCACCTGGCACCCT...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR GCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTGTTCTCAAACTTTTTaGCACTGGCATAGGCATAGG +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGCSQTF*HWHRHR
Trigger: CCTATGCCTATGCCAGTGGCAAAAAGTTTGAGAACA...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000600188.5
CDS-3UTR GCA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCAATTTGCTATCTACCTaGTTGGGGAAAGTGGCTAGA +
Preference number: 4 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGNLLST*LGKVAR
Trigger: TCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATT...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS GCA 90 bp TCGCTGGGCGTCTGGAGGTATCTGCTGCCTCTCCTCGGGGTCCGCTaGCAGGGCCTGAGCTTGGTCCCGACTGTGCCGCCTCTGGGAGGC +
Preference number: 5 (lower is better)
Translates to: SLGVWRYLLPLLGVR*QGLSLVPTVPPLGG
Trigger: GCCTCCCAGAGGCGGCACAGTCGGGACCAAGCTCAGGCCCTGGCAGCGGACCCCGAGGAGAGGCAGCAGATACCTCCAGACGCCCAGCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS-3UTR CAA 90 bp TGGGCCTCAGTCATCTGTCTCCTCGCCCTCCTCCTCCTCCTCGCCCTCCTCCTCGAGCGGCTCTCCTCCTaGGGGATCACGGGCGGCGGC +
Preference number: 5 (lower is better)
Translates to: WASVICLLALLLLLALLLERLSS*GITGGG
Trigger: GCCGCCGCCCGTGATCCCCAAGGAGGAGAGCCGCTC...GAGGAGGAGGGCGAGGAGGAGGAGGAGGGCGAGGAGACAGATGACTGAGGCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS TCA 90 bp GACAAGGAGGCCAAGCGAGAGCCACCTGTCGACACCGCCGGTTTCTaGGCACCGAGAGAGGGGGCCGTTACCCGTGGAGGGCGCGGGGAG +
Preference number: 5 (lower is better)
Translates to: DKEAKREPPVDTAGF*APREGAVTRGGRGE
Trigger: CTCCCCGCGCCCTCCACGGGTAACGGCCCCCTCTCTCGGTGCTCAGAAACCGGCGGTGTCGACAGGTGGCTCTCGCTTGGCCTCCTTGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000221538.8
CDS TCA 90 bp ATAGGCATAGGCCCCGGGCCAGAGGTTGGAGCGCACAACGGCCACTaGGTACTGCGGGCAGAGGCTGCAGGACAGGCGGGTGGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: IGIGPGPEVGAHNGH*VLRAEAAGQAGGPG
Trigger: CCCTGGACCACCCGCCTGTCCTGCAGCCTCTGCCCGCAGTACTCAGTGGCCGTTGTGCGCTCCAACCTCTGGCCCGGGGCCTATGCCTAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CAA 90 bp GCTTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCTGTCTCCTCGCCCTCCGCCCCGGGCCAGAGGTaGGAGCGCACAACGGCCACT +
Preference number: 5 (lower is better)
Translates to: AWGKWLEGGPQSSVSSPSAPGQR*ERTTAT
Trigger: AGTGGCCGTTGTGCGCTCCAACCTCTGGCCCGGGGC...GGAGGGCGAGGAGACAGATGACTGAGGCCCACCCTCTAGCCACTTTCCCCAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS GCA 90 bp CCCGCAGCGTGTCCAGCTTGGGGTGGAACCACTCCCACTGCGTGGTaGGGTTCAGAGACTCCAGGACAGACAAGGGGTCCTCAGGCCGCT +
Preference number: 5 (lower is better)
Translates to: PAACPAWGGTTPTAW*GSETPGQTRGPQAA
Trigger: AGCGGCCTGAGGACCCCTTGTCTGTCCTGGAGTCTCTGAACCGCACCACGCAGTGGGAGTGGTTCCACCCCAAGCTGGACACGCTGCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS GCA 90 bp GATGCACCCAGTTGGCCATGGAGTCGACCAGCTCCAGCACGGGGATaGCCTCGAAGTCCGGGTTCTCCTCGTAGGAGTCGCGCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: DAPSWPWSRPAPARG*PRSPGSPRRSRAQH
Trigger: GTGCTGGGCGCGACTCCTACGAGGAGAACCCGGACTTCGAGGGCATCCCCGTGCTGGAGCTGGTCGACTCCATGGCCAACTGGGTGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS CCA 90 bp CGTCCCGCAGCGTGTCCAGCTTGGGGTGGAACCACTCCCACTGCGTaGTGCGGTTCAGAGACTCCAGGACAGACAAGGGGTCCTCAGGCC +
Preference number: 5 (lower is better)
Translates to: RPAACPAWGGTTPTA*CGSETPGQTRGPQA
Trigger: GGCCTGAGGACCCCTTGTCTGTCCTGGAGTCTCTGAACCGCACCACGCAGTGGGAGTGGTTCCACCCCAAGCTGGACACGCTGCGGGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS CCA 90 bp GTGGGCTGCATCTCGGGGTCGTCCCGCAGCGTGTCCAGCTTGGGGTaGAACCACTCCCACTGCGTGGTGCGGTTCAGAGACTCCAGGACA +
Preference number: 5 (lower is better)
Translates to: VGCISGSSRSVSSLG*NHSHCVVRFRDSRT
Trigger: TGTCCTGGAGTCTCTGAACCGCACCACGCAGTGGGAGTGGTTCCACCCCAAGCTGGACACGCTGCGGGACGACCCCGAGATGCAGCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS CCA 90 bp GGCCCTGCGGCAGGATGTGCTGTGTGTGATGCACCCAGTTGGCCATaGAGTCGACCAGCTCCAGCACGGGGATGCCCTCGAAGTCCGGGT +
Preference number: 5 (lower is better)
Translates to: GPAAGCAVCDAPSWP*SRPAPARGCPRSPG
Trigger: ACCCGGACTTCGAGGGCATCCCCGTGCTGGAGCTGGTCGACTCCATGGCCAACTGGGTGCATCACACACAGCACATCCTGCCGCAGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS GCA 90 bp CATGACCTCGCCACCTTCCGTCATCTCCTCCACCTCCTCCTCCTCTaGCTCCTCCTCGCCCTCCCGGAATTCCACCTCGGCCACCAGGTA +
Preference number: 5 (lower is better)
Translates to: HDLATFRHLLHLLLL*LLLALPEFHLGHQV
Trigger: TACCTGGTGGCCGAGGTGGAATTCCGGGAGGGCGAGGAGGAGGCAGAGGAGGAGGAGGTGGAGGAGATGACGGAAGGTGGCGAGGTCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS CCA 90 bp GAGGCTGCTGGGCAGGGCGCTCAGGGTAGGGCGGCAGGTCTCCCATaGTTCGCCAGGAGGCACAGATCTCTAGGAGAAAGGCTTGCAGAC +
Preference number: 5 (lower is better)
Translates to: EAAGQGAQGRAAGLP*FARRHRSLGERLAD
Trigger: GTCTGCAAGCCTTTCTCCTAGAGATCTGTGCCTCCTGGCGAACCATGGGAGACCTGCCGCCCTACCCTGAGCGCCCTGCCCAGCAGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS CCA 90 bp TGGAAGGTGGGGTCCAGTTGCTGGAACAGGCTGCTTTGGCCCTGCTaGAGCCGCTGCAGCATTAGGCTGGTGGTGAGCTCGGCGACCTGC +
Preference number: 5 (lower is better)
Translates to: WKVGSSCWNRLLWPC*SRCSIRLVVSSATC
Trigger: GCAGGTCGCCGAGCTCACCACCAGCCTAATGCTGCAGCGGCTCCAGCAGGGCCAAAGCAGCCTGTTCCAGCAACTGGACCCCACCTTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS CCA 90 bp TGTAGGTGGGCTGCATCTCGGGGTCGTCCCGCAGCGTGTCCAGCTTaGGGTGGAACCACTCCCACTGCGTGGTGCGGTTCAGAGACTCCA +
Preference number: 5 (lower is better)
Translates to: CRWAASRGRPAACPA*GGTTPTAWCGSETP
Trigger: TGGAGTCTCTGAACCGCACCACGCAGTGGGAGTGGTTCCACCCCAAGCTGGACACGCTGCGGGACGACCCCGAGATGCAGCCCACCTACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS CCA 90 bp TCCATGGCAGGCCCGGCTCGTTGCACACAAAGTACAGGTACTTGTTaGCGCCTGAGCGGCTCTCCTCCTTGGGGATCACGGGCGGCGGCT +
Preference number: 5 (lower is better)
Translates to: SMAGPARCTQSTGTC*RLSGSPPWGSRAAA
Trigger: AGCCGCCGCCCGTGATCCCCAAGGAGGAGAGCCGCTCAGGCGCCAACAAGTACCTGTACTTTGTGTGCAACGAGCCGGGCCTGCCATGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS CCA 90 bp TGCAGCGGCCCTGCGGCAGGATGTGCTGTGTGTGATGCACCCAGTTaGCCATGGAGTCGACCAGCTCCAGCACGGGGATGCCCTCGAAGT +
Preference number: 5 (lower is better)
Translates to: CSGPAAGCAVCDAPS*PWSRPAPARGCPRS
Trigger: ACTTCGAGGGCATCCCCGTGCTGGAGCTGGTCGACTCCATGGCCAACTGGGTGCATCACACACAGCACATCCTGCCGCAGGGCCGCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS TCA 90 bp CAGGCCCGGCTCGTTGCACACAAAGTACAGGTACTTGTTGGCGCCTaGGCGGCTCTCCTCCTTGGGGATCACGGGCGGCGGCTTCCATAC +
Preference number: 5 (lower is better)
Translates to: QARLVAHKVQVLVGA*AALLLGDHGRRLPY
Trigger: GTATGGAAGCCGCCGCCCGTGATCCCCAAGGAGGAGAGCCGCTCAGGCGCCAACAAGTACCTGTACTTTGTGTGCAACGAGCCGGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS GCA 90 bp GGGTCCAGTTGCTGGAACAGGCTGCTTTGGCCCTGCTGGAGCCGCTaGAGCATTAGGCTGGTGGTGAGCTCGGCGACCTGCATCCTGCTT +
Preference number: 5 (lower is better)
Translates to: GSSCWNRLLWPCWSR*SIRLVVSSATCILL
Trigger: AAGCAGGATGCAGGTCGCCGAGCTCACCACCAGCCTAATGCTGCAGCGGCTCCAGCAGGGCCAAAGCAGCCTGTTCCAGCAACTGGACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS GCA 90 bp TGTGGATGGGCTGCTGCTCCACCAGCTGTTTCATGGCCAGGAAAATaGGGAAGCTCTCGTCCGAGCTCAGGCCGACGCCGGCCTGCTCGA +
Preference number: 5 (lower is better)
Translates to: CGWAAAPPAVSWPGK*GSSRPSSGRRRPAR
Trigger: TCGAGCAGGCCGGCGTCGGCCTGAGCTCGGACGAGAGCTTCCGCATTTTCCTGGCCATGAAACAGCTGGTGGAGCAGCAGCCCATCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS CCA 90 bp GGGTACTCCATGCCACCCAGCCGGGCTTCCTCAGCCTGGAAGACCTaGGGCATCAGCAAGTTCTCCTGTTGGGACAGGCTGCCCCTCTGT +
Preference number: 5 (lower is better)
Translates to: GYSMPPSRASSAWKT*GISKFSCWDRLPLC
Trigger: ACAGAGGGGCAGCCTGTCCCAACAGGAGAACTTGCTGATGCCCCAGGTCTTCCAGGCTGAGGAAGCCCGGCTGGGTGGCATGGAGTACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS CCA 90 bp GGCGTTCACGATCTGGGCTGGAGTGACGTGGGGCAGCCGCGTCCATaGCAGGCCCGGCTCGTTGCACACAAAGTACAGGTACTTGTTGGC +
Preference number: 5 (lower is better)
Translates to: GVHDLGWSDVGQPRP*QARLVAHKVQVLVG
Trigger: GCCAACAAGTACCTGTACTTTGTGTGCAACGAGCCGGGCCTGCCATGGACGCGGCTGCCCCACGTCACTCCAGCCCAGATCGTGAACGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CAA 90 bp CTCGCCCTCCTCCTCCTCCTCGCCCTCCTCCTCCTCCTCTGTGGCTCCCAGGGCCCTGTGAAGAACTTCTaGATCTTTCGGGCGTTCACG +
Preference number: 5 (lower is better)
Translates to: LALLLLLALLLLLCGSQGPVKNF*IFRAFT
Trigger: CGTGAACGCCCGAAAGATCAAGAAGTTCTTCACAGG...GCCCTGGGAGCCACAGAGGAGGAGGAGGAGGGCGAGGAGGAGGAGGAGGGCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS GCA 90 bp TCCTCAGGCCGCTGGTTCAGGATCTTGGTCAGCAGATTCACCAGGTaGTCGTACCTGCCTCCCGCAGGAGGAGTGGGAGGAGAGGGACCT +
Preference number: 5 (lower is better)
Translates to: SSGRWFRILVSRFTR*SYLPPAGGVGGEGP
Trigger: AGGTCCCTCTCCTCCCACTCCTCCTGCGGGAGGCAGGTACGAGCACCTGGTGAATCTGCTGACCAAGATCCTGAACCAGCGGCCTGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600188.5
CDS CCA 90 bp GCCTGTGAAGAACTTCTTGATCTTTCGGGCGTTCACGATCTGGGCTaGAGTGACGTGGGGCAGCCGCGTCCATGGCAGGCCCGGCTCGTT +
Preference number: 5 (lower is better)
Translates to: ACEELLDLSGVHDLG*SDVGQPRPWQARLV
Trigger: AACGAGCCGGGCCTGCCATGGACGCGGCTGCCCCACGTCACTCCAGCCCAGATCGTGAACGCCCGAAAGATCAAGAAGTTCTTCACAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS CCA 90 bp GGCTATCTGGGCCCGCAGGTAGTTGGCCTCGTTGCCCGGGAAGGGTaGGTAGCTGACGACTGGCGTGTCCAGGTAGCCTGTGAAGAACTT +
Preference number: 5 (lower is better)
Translates to: GYLGPQVVGLVAREG*VADDWRVQVACEEL
Trigger: AAGTTCTTCACAGGCTACCTGGACACGCCAGTCGTCAGCTACCCACCCTTCCCGGGCAACGAGGCCAACTACCTGCGGGCCCAGATAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS CCA 90 bp CAAACTTTTTGCCACTGGCATAGGCATAGGCCCCGGGCCAGAGGTTaGAGCGCACAACGGCCACTGAGTACTGCGGGCAGAGGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: QTFCHWHRHRPRARG*SAQRPLSTAGRGCR
Trigger: CCTGCAGCCTCTGCCCGCAGTACTCAGTGGCCGTTGTGCGCTCCAACCTCTGGCCCGGGGCCTATGCCTATGCCAGTGGCAAAAAGTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000600188.5
CDS CCA 90 bp TTCTCAAATTGCCACTGGCATAGGCATAGGCCCCGGGCCAGAGGTTaGAGCGCACAACGGCCACTGAGTACTGCGGGCAGAGGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: FSNCHWHRHRPRARG*SAQRPLSTAGRGCR
Trigger: CCTGCAGCCTCTGCCCGCAGTACTCAGTGGCCGTTGTGCGCTCCAACCTCTGGCCCGGGGCCTATGCCTATGCCAGTGGCAATTTGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CAA 90 bp GTGGCTAGAGGGTGGGCCTCAGTCATCTGTCTCCTCGCCCTCCTCCTCCTCCTCAGGCTGAGGTCGCAATaGATGCTGGTCTGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: VARGWASVICLLALLLLLRLRSQ*MLVCSR
Trigger: CCTGCTGCAGACCAGCATCAATTGCGACCTCAGCCT...GAGGAGGAGGAGGAGGGCGAGGAGACAGATGACTGAGGCCCACCCTCTAGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CAA 90 bp GCTTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCTGTCTCCTCGCCCTCCACTGGGGTACTCTTGTaGAATGGGGGCTGGCAGGGC +
Preference number: 5 (lower is better)
Translates to: AWGKWLEGGPQSSVSSPSTGVLL*NGGWQG
Trigger: GCCCTGCCAGCCCCCATTCAACAAGAGTACCCCAGT...GGAGGGCGAGGAGACAGATGACTGAGGCCCACCCTCTAGCCACTTTCCCCAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CAA 90 bp GGGTGGGCCTCAGTCATCTGTCTCCTCGCCCTCCTCCTCCTCCTCGCCCTCCTCTTGCTATCTACCTGCTaGGGGAAAGTGGCTAGAGGG +
Preference number: 5 (lower is better)
Translates to: GWASVICLLALLLLLALLLLSTC*GKVARG
Trigger: CCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAA...GAGGAGGGCGAGGAGGAGGAGGAGGGCGAGGAGACAGATGACTGAGGCCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS TCA 90 bp GGCTGCTTTGGCCCTGCTGGAGCCGCTGCAGCATTAGGCTGGTGGTaGGCTCGGCGACCTGCATCCTGCTTTCATCAGAGTAAGGCTGAG +
Preference number: 5 (lower is better)
Translates to: GCFGPAGAAAALGWW*ARRPASCFHQSKAE
Trigger: CTCAGCCTTACTCTGATGAAAGCAGGATGCAGGTCGCCGAGCTCACCACCAGCCTAATGCTGCAGCGGCTCCAGCAGGGCCAAAGCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS TCA 90 bp CCTCCTCCATCTCCTGTTCGCCTTCAGTGCCGCCTCCACTCCGGGTaGACAGCGCCTTCTGTTTCTCCGCCATCTTGTAGGTGGGCTGCA +
Preference number: 5 (lower is better)
Translates to: PPPSPVRLQCRLHSG*TAPSVSPPSCRWAA
Trigger: TGCAGCCCACCTACAAGATGGCGGAGAAACAGAAGGCGCTGTTCACCCGGAGTGGAGGCGGCACTGAAGGCGAACAGGAGATGGAGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS GCA 90 bp GCTGGAACTCTGAGGGAAAGCCCGTGTTCACAGATGGGTACTCCATaGCACCCAGCCGGGCTTCCTCAGCCTGGAAGACCTGGGGCATCA +
Preference number: 5 (lower is better)
Translates to: AGTLRESPCSQMGTP*HPAGLPQPGRPGAS
Trigger: TGATGCCCCAGGTCTTCCAGGCTGAGGAAGCCCGGCTGGGTGGCATGGAGTACCCATCTGTGAACACGGGCTTTCCCTCAGAGTTCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS CCA 90 bp AGAAGCGACAGGTGTGGATGGGCTGCTGCTCCACCAGCTGTTTCATaGCCAGGAAAATGCGGAAGCTCTCGTCCGAGCTCAGGCCGACGC +
Preference number: 5 (lower is better)
Translates to: RSDRCGWAAAPPAVS*PGKCGSSRPSSGRR
Trigger: GCGTCGGCCTGAGCTCGGACGAGAGCTTCCGCATTTTCCTGGCCATGAAACAGCTGGTGGAGCAGCAGCCCATCCACACCTGTCGCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS CCA 90 bp AACTTCTTGATCTTTCGGGCGTTCACGATCTGGGCTGGAGTGACGTaGGGCAGCCGCGTCCATGGCAGGCCCGGCTCGTTGCACACAAAG +
Preference number: 5 (lower is better)
Translates to: NFLIFRAFTIWAGVT*GSRVHGRPGSLHTK
Trigger: CTTTGTGTGCAACGAGCCGGGCCTGCCATGGACGCGGCTGCCCCACGTCACTCCAGCCCAGATCGTGAACGCCCGAAAGATCAAGAAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS CCA 90 bp ACTCCAGGACAGACAAGGGGTCCTCAGGCCGCTGGTTCAGGATCTTaGTCAGCAGATTCACCAGGTGCTCGTACCTGCCTCCCGCAGGAG +
Preference number: 5 (lower is better)
Translates to: TPGQTRGPQAAGSGS*SADSPGARTCLPQE
Trigger: CTCCTGCGGGAGGCAGGTACGAGCACCTGGTGAATCTGCTGACCAAGATCCTGAACCAGCGGCCTGAGGACCCCTTGTCTGTCCTGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600188.5
CDS-3UTR CAA 90 bp GTGGCTAGAGGGTGGGCCTCAGTCATCTGTCTCCTCGCCCTCCTCCTCCTCCTCTTGATTCCCAGGATCTaGCCCCAGAAGCGACAGGTG +
Preference number: 5 (lower is better)
Translates to: VARGWASVICLLALLLLLLIPRI*PQKRQV
Trigger: CACCTGTCGCTTCTGGGGCAAGATCCTGGGAATCAA...GAGGAGGAGGAGGAGGGCGAGGAGACAGATGACTGAGGCCCACCCTCTAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CAA 90 bp TTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCTGTCTCCTCGCCCTCCTCGCCACTGGGGTACTCTaGTTGAATGGGGGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: LGKVARGWASVICLLALLATGVL*LNGGWQ
Trigger: CTGCCAGCCCCCATTCAACAAGAGTACCCCAGTGGC...GAGGAGGGCGAGGAGACAGATGACTGAGGCCCACCCTCTAGCCACTTTCCCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS CCA 90 bp TTCACAGATGGGTACTCCATGCCACCCAGCCGGGCTTCCTCAGCCTaGAAGACCTGGGGCATCAGCAAGTTCTCCTGTTGGGACAGGCTG +
Preference number: 5 (lower is better)
Translates to: FTDGYSMPPSRASSA*KTWGISKFSCWDRL
Trigger: CAGCCTGTCCCAACAGGAGAACTTGCTGATGCCCCAGGTCTTCCAGGCTGAGGAAGCCCGGCTGGGTGGCATGGAGTACCCATCTGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS-3UTR CAA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCCCCGGGCCAGAGGTaGGAGCGCACAACGGCCACT +
Preference number: 5 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWAPGQR*ERTTAT
Trigger: AGTGGCCGTTGTGCGCTCCAACCTCTGGCCCGGGGC...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CAA 90 bp AGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGCTGGCAGGGCCGGGTaGAAGCTCTCGGGGCTGTAC +
Preference number: 5 (lower is better)
Translates to: RGNLLSTCLGKVARGWASAGRAG*KLSGLY
Trigger: GTACAGCCCCGAGAGCTTCAACCCGGCCCTGCCAGC...TGAGGCCCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS CCA 90 bp GTGCGGTTCAGAGACTCCAGGACAGACAAGGGGTCCTCAGGCCGCTaGTTCAGGATCTTGGTCAGCAGATTCACCAGGTGCTCGTACAGG +
Preference number: 5 (lower is better)
Translates to: VRFRDSRTDKGSSGR*FRILVSRFTRCSYR
Trigger: CCTGTACGAGCACCTGGTGAATCTGCTGACCAAGATCCTGAACCAGCGGCCTGAGGACCCCTTGTCTGTCCTGGAGTCTCTGAACCGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS CCA 90 bp GTGCGGTTCAGAGACTCCAGGACAGACAAGGGGTCCTCAGGCCGCTaGTTCAGGATCTTGGTCAGCAGATTCACCAGGTGCTCGTACCTG +
Preference number: 5 (lower is better)
Translates to: VRFRDSRTDKGSSGR*FRILVSRFTRCSYL
Trigger: CAGGTACGAGCACCTGGTGAATCTGCTGACCAAGATCCTGAACCAGCGGCCTGAGGACCCCTTGTCTGTCCTGGAGTCTCTGAACCGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600188.5
CDS-3UTR CAA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGTGCCAGGGCCTGAGCTaGGTCCCGACTGTGCCGCCT +
Preference number: 5 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWCQGLS*VPTVPP
Trigger: AGGCGGCACAGTCGGGACCAAGCTCAGGCCCTGGCA...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS-3UTR CAA 90 bp AATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCTGCCAGGGCCTGAGCTaGGTCCCGACTGTGCCGCCT +
Preference number: 5 (lower is better)
Translates to: NLLSTCLGKVARGWASVICQGLS*VPTVPP
Trigger: AGGCGGCACAGTCGGGACCAAGCTCAGGCCCTGGCA...GATGACTGAGGCCCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CAA 90 bp TTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCTGTCTCCTCGCCCTCCTCACAAAGTACAGGTACTaGTTGGCGCCTGAGCGGCTC +
Preference number: 5 (lower is better)
Translates to: LGKVARGWASVICLLALLTKYRY*LAPERL
Trigger: GAGCCGCTCAGGCGCCAACAAGTACCTGTACTTTGT...GAGGAGGGCGAGGAGACAGATGACTGAGGCCCACCCTCTAGCCACTTTCCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CAA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCTGGCAGGGCCGGGTaGAAGCTCTCGGGGCTGTAC +
Preference number: 5 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWAGRAG*KLSGLY
Trigger: GTACAGCCCCGAGAGCTTCAACCCGGCCCTGCCAGC...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CAA 90 bp AGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCCTCAAACTGGCCCAAGGGGTaGACTGGGGGCTCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: RGNLLSTCLGKVARGWASNWPKG*TGGSWK
Trigger: CTTCCAGGAGCCCCCAGTCAACCCCTTGGGCCAGTT...TGAGGCCCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CAA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGCGCAGCGTGTCCAGCTaGGGGTGGAACCACTCCCAC +
Preference number: 5 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWRSVSS*GWNHSH
Trigger: GTGGGAGTGGTTCCACCCCAAGCTGGACACGCTGCG...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CAA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCGAGCGGCTCTCCTCCTaGGGGATCACGGGCGGCGGC +
Preference number: 5 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGERLSS*GITGGG
Trigger: GCCGCCGCCCGTGATCCCCAAGGAGGAGAGCCGCTC...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CAA 90 bp AGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCCTCACAGCAAGTTCTCCTGTaGGGACAGGCTGCCCCTCTG +
Preference number: 5 (lower is better)
Translates to: RGNLLSTCLGKVARGWASQQVLL*GQAAPL
Trigger: CAGAGGGGCAGCCTGTCCCAACAGGAGAACTTGCTG...TGAGGCCCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CAA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGAACTGGCCCAAGGGGTaGACTGGGGGCTCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWNWPKG*TGGSWK
Trigger: CTTCCAGGAGCCCCCAGTCAACCCCTTGGGCCAGTT...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS-3UTR CAA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCGCCCCGGGCCAGAGGTaGGAGCGCACAACGGCCACT +
Preference number: 5 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGAPGQR*ERTTAT
Trigger: AGTGGCCGTTGTGCGCTCCAACCTCTGGCCCGGGGC...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CAA 90 bp AATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGCCTCAGTCATCGGCAGGCCCGGCTCGTaGCACACAAAGTACAGGTAC +
Preference number: 5 (lower is better)
Translates to: NLLSTCLGKVARGWASVIGRPGS*HTKYRY
Trigger: GTACCTGTACTTTGTGTGCAACGAGCCGGGCCTGCC...GATGACTGAGGCCCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597055.1
CDS-3UTR CAA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGGCAGGCCCGGCTCGTaGCACACAAAGTACAGGTAC +
Preference number: 5 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWGRPGS*HTKYRY
Trigger: GTACCTGTACTTTGTGTGCAACGAGCCGGGCCTGCC...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CAA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCGCTGGCAGGGCCGGGTaGAAGCTCTCGGGGCTGTAC +
Preference number: 5 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGAGRAG*KLSGLY
Trigger: GTACAGCCCCGAGAGCTTCAACCCGGCCCTGCCAGC...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CAA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGACTGGGGTACTCTTGTaGAATGGGGGCTGGCAGGGC +
Preference number: 5 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWTGVLL*NGGWQG
Trigger: GCCCTGCCAGCCCCCATTCAACAAGAGTACCCCAGT...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CAA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCCGCAGCGTGTCCAGCTaGGGGTGGAACCACTCCCAC +
Preference number: 5 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGRSVSS*GWNHSH
Trigger: GTGGGAGTGGTTCCACCCCAAGCTGGACACGCTGCG...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CAA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGAAGTACAGGTACTTGTaGGCGCCTGAGCGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWKYRYL*APERLS
Trigger: GGAGAGCCGCTCAGGCGCCAACAAGTACCTGTACTT...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CAA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGCGCTGGTTCAGGATCTaGGTCAGCAGATTCACCAGG +
Preference number: 5 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWRWFRI*VSRFTR
Trigger: CCTGGTGAATCTGCTGACCAAGATCCTGAACCAGCG...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CAA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGTTGATTCCCAGGATCTaGCCCCAGAAGCGACAGGTG +
Preference number: 5 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWLIPRI*PQKRQV
Trigger: CACCTGTCGCTTCTGGGGCAAGATCCTGGGAATCAA...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CAA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGACAAAGTACAGGTACTaGTTGGCGCCTGAGCGGCTC +
Preference number: 5 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWTKYRY*LAPERL
Trigger: GAGCCGCTCAGGCGCCAACAAGTACCTGTACTTTGT...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CAA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCCAGCAAGTTCTCCTGTaGGGACAGGCTGCCCCTCTG +
Preference number: 5 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGQQVLL*GQAAPL
Trigger: CAGAGGGGCAGCCTGTCCCAACAGGAGAACTTGCTG...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS-3UTR CAA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCGGCAGGCCCGGCTCGTaGCACACAAAGTACAGGTAC +
Preference number: 5 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGGRPGS*HTKYRY
Trigger: GTACCTGTACTTTGTGTGCAACGAGCCGGGCCTGCC...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CAA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCGCCACTGGGGTACTCTaGTTGAATGGGGGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGATGVL*LNGGWQ
Trigger: CTGCCAGCCCCCATTCAACAAGAGTACCCCAGTGGC...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CAA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGTTGCTATCTACCTGCTaGGGGAAAGTGGCTAGAGGG +
Preference number: 5 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWLLSTC*GKVARG
Trigger: CCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAA...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CAA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCGAAGGTGGGGTCCAGTaGCTGGAACAGGCTGCTTTG +
Preference number: 5 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGEGGVQ*LEQAAL
Trigger: CAAAGCAGCCTGTTCCAGCAACTGGACCCCACCTTC...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS-3UTR CAA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCAGGCTGAGGTCGCAATaGATGCTGGTCTGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGRLRSQ*MLVCSR
Trigger: CCTGCTGCAGACCAGCATCAATTGCGACCTCAGCCT...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS-3UTR CAA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCAAGTACAGGTACTTGTaGGCGCCTGAGCGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGKYRYL*APERLS
Trigger: GGAGAGCCGCTCAGGCGCCAACAAGTACCTGTACTT...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CAA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGCCTGTGAAGAACTTCTaGATCTTTCGGGCGTTCACG +
Preference number: 5 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWPVKNF*IFRAFT
Trigger: CGTGAACGCCCGAAAGATCAAGAAGTTCTTCACAGG...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CAA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCCGCTGGTTCAGGATCTaGGTCAGCAGATTCACCAGG +
Preference number: 5 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGRWFRI*VSRFTR
Trigger: CCTGGTGAATCTGCTGACCAAGATCCTGAACCAGCG...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CAA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTTGATTCCCAGGATCTaGCCCCAGAAGCGACAGGTG +
Preference number: 5 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGLIPRI*PQKRQV
Trigger: CACCTGTCGCTTCTGGGGCAAGATCCTGGGAATCAA...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CAA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCACAAAGTACAGGTACTaGTTGGCGCCTGAGCGGCTC +
Preference number: 5 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGTKYRY*LAPERL
Trigger: GAGCCGCTCAGGCGCCAACAAGTACCTGTACTTTGT...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CAA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTTGCTATCTACCTGCTaGGGGAAAGTGGCTAGAGGG +
Preference number: 5 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGLLSTC*GKVARG
Trigger: CCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAA...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CAA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCCCTGTGAAGAACTTCTaGATCTTTCGGGCGTTCACG +
Preference number: 5 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGPVKNF*IFRAFT
Trigger: CGTGAACGCCCGAAAGATCAAGAAGTTCTTCACAGG...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS-3UTR CAA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGGTGGAGGAATTTTATTaGAAGCAGTTGCCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWVEEFY*KQLPSF
Trigger: AAAGGAAGGCAACTGCTTCAAATAAAATTCCTCCAC...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000600188.5
CDS-3UTR CAA 90 bp CCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCTAGAGGGTGGTTTTATTTGAAGCAGTaGCCTTCCTTTTCTATCCCT +
Preference number: 5 (lower is better)
Translates to: PLRGNLLSTCLGKVARGWFYLKQ*PSFSIP
Trigger: AGGGATAGAAAAGGAAGGCAACTGCTTCAAATAAAA...CCACCCTCTAGCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000600188.5
CDS-3UTR CAA 90 bp ATGCTAACTACCTCTAAGGGGAAATTTGCTATCTACCTGCTTGGGGAAAGTGGCGTGGAGGAATTTTATTaGAAGCAGTTGCCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: MLTTSKGKFAIYLLGESGVEEFY*KQLPSF
Trigger: AAAGGAAGGCAACTGCTTCAAATAAAATTCCTCCAC...GCCACTTTCCCCAAGCAGGTAGATAGCAAATTTCCCCTTAGAGGTAGTTAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000600188.5
CDS TCA 72 bp GGCCCCGGGCCAGAGGTTGGAGCGCACAACGGCCACTaGGTACTGCGGGCAGAGGCTGCAGGACAGGCGGGT +
Preference number: 6 (lower is better)
Translates to: GPGPEVGAHNGH*VLRAEAAGQAG
Trigger: ACCCGCCTGTCCTGCAGCCTCTGCCCGCAGTACTCAGTGGCCGTTGTGCGCTCCAACCTCTGGCCCGGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS TCA 72 bp GCCAAGCGAGAGCCACCTGTCGACACCGCCGGTTTCTaGGCACCGAGAGAGGGGGCCGTTACCCGTGGAGGG +
Preference number: 6 (lower is better)
Translates to: AKREPPVDTAGF*APREGAVTRGG
Trigger: CCCTCCACGGGTAACGGCCCCCTCTCTCGGTGCTCAGAAACCGGCGGTGTCGACAGGTGGCTCTCGCTTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000221538.8
CDS CAA 72 bp GGCTGCATCTCGGGGTCGTCCCGCAGCGTGTCCAGCTaGGGGTGGAACCACTCCCACTGCGTGGTGCGGTTC +
Preference number: 6 (lower is better)
Translates to: GCISGSSRSVSS*GWNHSHCVVRF
Trigger: GAACCGCACCACGCAGTGGGAGTGGTTCCACCCCAAGCTGGACACGCTGCGGGACGACCCCGAGATGCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS GCA 72 bp GCCACCTTCCGTCATCTCCTCCACCTCCTCCTCCTCTaGCTCCTCCTCGCCCTCCCGGAATTCCACCTCGGC +
Preference number: 6 (lower is better)
Translates to: ATFRHLLHLLLL*LLLALPEFHLG
Trigger: GCCGAGGTGGAATTCCGGGAGGGCGAGGAGGAGGCAGAGGAGGAGGAGGTGGAGGAGATGACGGAAGGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS CCA 72 bp AGGCTGCCCCTCTGTGACCAACCAGGGGCGTTTCGCTaGGCGTCTGGAGGTATCTGCTGCCTCTCCTCGGGG +
Preference number: 6 (lower is better)
Translates to: RLPLCDQPGAFR*ASGGICCLSSG
Trigger: CCCCGAGGAGAGGCAGCAGATACCTCCAGACGCCCAGCGAAACGCCCCTGGTTGGTCACAGAGGGGCAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS CCA 72 bp GCTGCATCTCGGGGTCGTCCCGCAGCGTGTCCAGCTTaGGGTGGAACCACTCCCACTGCGTGGTGCGGTTCA +
Preference number: 6 (lower is better)
Translates to: AASRGRPAACPA*GGTTPTAWCGS
Trigger: TGAACCGCACCACGCAGTGGGAGTGGTTCCACCCCAAGCTGGACACGCTGCGGGACGACCCCGAGATGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS CCA 72 bp ATCTTTCGGGCGTTCACGATCTGGGCTGGAGTGACGTaGGGCAGCCGCGTCCATGGCAGGCCCGGCTCGTTG +
Preference number: 6 (lower is better)
Translates to: IFRAFTIWAGVT*GSRVHGRPGSL
Trigger: CAACGAGCCGGGCCTGCCATGGACGCGGCTGCCCCACGTCACTCCAGCCCAGATCGTGAACGCCCGAAAGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS CCA 72 bp GGCCCGCAGGTAGTTGGCCTCGTTGCCCGGGAAGGGTaGGTAGCTGACGACTGGCGTGTCCAGGTAGCCTGT +
Preference number: 6 (lower is better)
Translates to: GPQVVGLVAREG*VADDWRVQVAC
Trigger: ACAGGCTACCTGGACACGCCAGTCGTCAGCTACCCACCCTTCCCGGGCAACGAGGCCAACTACCTGCGGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS CAA 90 bp CGCGTCCATGGCAGGCCCGGCTCGTTGCACACAAAGTACAGGTACTaGTTGGCGCCTGAGCGGCTCTCCTCCTTGGGGATCACGGGCGGC +
Preference number: 6 (lower is better)
Translates to: RVHGRPGSLHTKYRY*LAPERLSSLGITGG
Trigger: GCCGCCCGTGATCCCCAAGGAGGAGAGCCGCTCAGGCGCCAACAAGTACCTGTACTTTGTGTGCAACGAGCCGGGCCTGCCATGGACGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS CAA 90 bp GCTGGAGTGACGTGGGGCAGCCGCGTCCATGGCAGGCCCGGCTCGTaGCACACAAAGTACAGGTACTTGTTGGCGCCTGAGCGGCTCTCC +
Preference number: 6 (lower is better)
Translates to: AGVTWGSRVHGRPGS*HTKYRYLLAPERLS
Trigger: GGAGAGCCGCTCAGGCGCCAACAAGTACCTGTACTTTGTGTGCAACGAGCCGGGCCTGCCATGGACGCGGCTGCCCCACGTCACTCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS GCA 72 bp TGCTGGAACAGGCTGCTTTGGCCCTGCTGGAGCCGCTaGAGCATTAGGCTGGTGGTGAGCTCGGCGACCTGC +
Preference number: 6 (lower is better)
Translates to: CWNRLLWPCWSR*SIRLVVSSATC
Trigger: GCAGGTCGCCGAGCTCACCACCAGCCTAATGCTGCAGCGGCTCCAGCAGGGCCAAAGCAGCCTGTTCCAGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS CCA 72 bp GGGCAGGGCGCTCAGGGTAGGGCGGCAGGTCTCCCATaGTTCGCCAGGAGGCACAGATCTCTAGGAGAAAGG +
Preference number: 6 (lower is better)
Translates to: GQGAQGRAAGLP*FARRHRSLGER
Trigger: CCTTTCTCCTAGAGATCTGTGCCTCCTGGCGAACCATGGGAGACCTGCCGCCCTACCCTGAGCGCCCTGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS CCA 72 bp ATCTCGGGGTCGTCCCGCAGCGTGTCCAGCTTGGGGTaGAACCACTCCCACTGCGTGGTGCGGTTCAGAGAC +
Preference number: 6 (lower is better)
Translates to: ISGSSRSVSSLG*NHSHCVVRFRD
Trigger: GTCTCTGAACCGCACCACGCAGTGGGAGTGGTTCCACCCCAAGCTGGACACGCTGCGGGACGACCCCGAGAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS CCA 72 bp TGCCACTGGCATAGGCATAGGCCCCGGGCCAGAGGTTaGAGCGCACAACGGCCACTGAGTACTGCGGGCAGA +
Preference number: 6 (lower is better)
Translates to: CHWHRHRPRARG*SAQRPLSTAGR
Trigger: TCTGCCCGCAGTACTCAGTGGCCGTTGTGCGCTCCAACCTCTGGCCCGGGGCCTATGCCTATGCCAGTGGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS TCA 72 bp CAGCAAGTTCTCCTGTTGGGACAGGCTGCCCCTCTGTaGCCAACCAGGGGCGTTTCGCTGGGCGTCTGGAGG +
Preference number: 6 (lower is better)
Translates to: QQVLLLGQAAPL*PTRGVSLGVWR
Trigger: CCTCCAGACGCCCAGCGAAACGCCCCTGGTTGGTCACAGAGGGGCAGCCTGTCCCAACAGGAGAACTTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS TCA 72 bp CAAGTGCAGCGGCCCTGCGGCAGGATGTGCTGTGTGTaGTGCACCCAGTTGGCCATGGAGTCGACCAGCTCC +
Preference number: 6 (lower is better)
Translates to: QVQRPCGRMCCV*CTQLAMESTSS
Trigger: GGAGCTGGTCGACTCCATGGCCAACTGGGTGCATCACACACAGCACATCCTGCCGCAGGGCCGCTGCACTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS GCA 72 bp GTGGGGTCCAGTTGCTGGAACAGGCTGCTTTGGCCCTaGTGGAGCCGCTGCAGCATTAGGCTGGTGGTGAGC +
Preference number: 6 (lower is better)
Translates to: VGSSCWNRLLWP*WSRCSIRLVVS
Trigger: GCTCACCACCAGCCTAATGCTGCAGCGGCTCCAGCAGGGCCAAAGCAGCCTGTTCCAGCAACTGGACCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS GCA 72 bp AGTTGGCCATGGAGTCGACCAGCTCCAGCACGGGGATaGCCTCGAAGTCCGGGTTCTCCTCGTAGGAGTCGC +
Preference number: 6 (lower is better)
Translates to: SWPWSRPAPARG*PRSPGSPRRSR
Trigger: GCGACTCCTACGAGGAGAACCCGGACTTCGAGGGCATCCCCGTGCTGGAGCTGGTCGACTCCATGGCCAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS CCA 72 bp GATCTGGGCTGGAGTGACGTGGGGCAGCCGCGTCCATaGCAGGCCCGGCTCGTTGCACACAAAGTACAGGTA +
Preference number: 6 (lower is better)
Translates to: DLGWSDVGQPRP*QARLVAHKVQV
Trigger: TACCTGTACTTTGTGTGCAACGAGCCGGGCCTGCCATGGACGCGGCTGCCCCACGTCACTCCAGCCCAGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS CCA 72 bp CCTGCGGCAGGATGTGCTGTGTGTGATGCACCCAGTTaGCCATGGAGTCGACCAGCTCCAGCACGGGGATGC +
Preference number: 6 (lower is better)
Translates to: PAAGCAVCDAPS*PWSRPAPARGC
Trigger: GCATCCCCGTGCTGGAGCTGGTCGACTCCATGGCCAACTGGGTGCATCACACACAGCACATCCTGCCGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS TCA 72 bp GGCCCTGCTGGAGCCGCTGCAGCATTAGGCTGGTGGTaGGCTCGGCGACCTGCATCCTGCTTTCATCAGAGT +
Preference number: 6 (lower is better)
Translates to: GPAGAAAALGWW*ARRPASCFHQS
Trigger: ACTCTGATGAAAGCAGGATGCAGGTCGCCGAGCTCACCACCAGCCTAATGCTGCAGCGGCTCCAGCAGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS TCA 72 bp CTCGTTGCACACAAAGTACAGGTACTTGTTGGCGCCTaGGCGGCTCTCCTCCTTGGGGATCACGGGCGGCGG +
Preference number: 6 (lower is better)
Translates to: LVAHKVQVLVGA*AALLLGDHGRR
Trigger: CCGCCGCCCGTGATCCCCAAGGAGGAGAGCCGCTCAGGCGCCAACAAGTACCTGTACTTTGTGTGCAACGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS GCA 72 bp GGATCTTGGTCAGCAGATTCACCAGGTGCTCGTACCTaGCTCCCGCAGGAGGAGTGGGAGGAGAGGGACCTC +
Preference number: 6 (lower is better)
Translates to: GSWSADSPGART*LPQEEWEERDL
Trigger: GAGGTCCCTCTCCTCCCACTCCTCCTGCGGGAGGCAGGTACGAGCACCTGGTGAATCTGCTGACCAAGATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600188.5
CDS CCA 72 bp ATGCCACCCAGCCGGGCTTCCTCAGCCTGGAAGACCTaGGGCATCAGCAAGTTCTCCTGTTGGGACAGGCTG +
Preference number: 6 (lower is better)
Translates to: MPPSRASSAWKT*GISKFSCWDRL
Trigger: CAGCCTGTCCCAACAGGAGAACTTGCTGATGCCCCAGGTCTTCCAGGCTGAGGAAGCCCGGCTGGGTGGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS CCA 72 bp GGGTACTCCATGCCACCCAGCCGGGCTTCCTCAGCCTaGAAGACCTGGGGCATCAGCAAGTTCTCCTGTTGG +
Preference number: 6 (lower is better)
Translates to: GYSMPPSRASSA*KTWGISKFSCW
Trigger: CCAACAGGAGAACTTGCTGATGCCCCAGGTCTTCCAGGCTGAGGAAGCCCGGCTGGGTGGCATGGAGTACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS CCA 72 bp GCGTGTCCAGCTTGGGGTGGAACCACTCCCACTGCGTaGTGCGGTTCAGAGACTCCAGGACAGACAAGGGGT +
Preference number: 6 (lower is better)
Translates to: ACPAWGGTTPTA*CGSETPGQTRG
Trigger: ACCCCTTGTCTGTCCTGGAGTCTCTGAACCGCACCACGCAGTGGGAGTGGTTCCACCCCAAGCTGGACACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS CCA 72 bp GGCCCGGCTCGTTGCACACAAAGTACAGGTACTTGTTaGCGCCTGAGCGGCTCTCCTCCTTGGGGATCACGG +
Preference number: 6 (lower is better)
Translates to: GPARCTQSTGTC*RLSGSPPWGSR
Trigger: CCGTGATCCCCAAGGAGGAGAGCCGCTCAGGCGCCAACAAGTACCTGTACTTTGTGTGCAACGAGCCGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS CCA 72 bp GAACTTCTTGATCTTTCGGGCGTTCACGATCTGGGCTaGAGTGACGTGGGGCAGCCGCGTCCATGGCAGGCC +
Preference number: 6 (lower is better)
Translates to: ELLDLSGVHDLG*SDVGQPRPWQA
Trigger: GGCCTGCCATGGACGCGGCTGCCCCACGTCACTCCAGCCCAGATCGTGAACGCCCGAAAGATCAAGAAGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS CCA 72 bp GCAGGATGTGCTGTGTGTGATGCACCCAGTTGGCCATaGAGTCGACCAGCTCCAGCACGGGGATGCCCTCGA +
Preference number: 6 (lower is better)
Translates to: AGCAVCDAPSWP*SRPAPARGCPR
Trigger: TCGAGGGCATCCCCGTGCTGGAGCTGGTCGACTCCATGGCCAACTGGGTGCATCACACACAGCACATCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS CAA 72 bp GGCAGGCCCGGCTCGTTGCACACAAAGTACAGGTACTaGTTGGCGCCTGAGCGGCTCTCCTCCTTGGGGATC +
Preference number: 6 (lower is better)
Translates to: GRPGSLHTKYRY*LAPERLSSLGI
Trigger: GATCCCCAAGGAGGAGAGCCGCTCAGGCGCCAACAAGTACCTGTACTTTGTGTGCAACGAGCCGGGCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS CAA 90 bp GACTCCAGGACAGACAAGGGGTCCTCAGGCCGCTGGTTCAGGATCTaGGTCAGCAGATTCACCAGGTGCTCGTACCTGCCTCCCGCAGGA +
Preference number: 6 (lower is better)
Translates to: DSRTDKGSSGRWFRI*VSRFTRCSYLPPAG
Trigger: TCCTGCGGGAGGCAGGTACGAGCACCTGGTGAATCTGCTGACCAAGATCCTGAACCAGCGGCCTGAGGACCCCTTGTCTGTCCTGGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600188.5
CDS GCA 72 bp CTGAGGGAAAGCCCGTGTTCACAGATGGGTACTCCATaGCACCCAGCCGGGCTTCCTCAGCCTGGAAGACCT +
Preference number: 6 (lower is better)
Translates to: LRESPCSQMGTP*HPAGLPQPGRP
Trigger: AGGTCTTCCAGGCTGAGGAAGCCCGGCTGGGTGGCATGGAGTACCCATCTGTGAACACGGGCTTTCCCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS GCA 72 bp TGTCCAGCTTGGGGTGGAACCACTCCCACTGCGTGGTaGGGTTCAGAGACTCCAGGACAGACAAGGGGTCCT +
Preference number: 6 (lower is better)
Translates to: CPAWGGTTPTAW*GSETPGQTRGP
Trigger: AGGACCCCTTGTCTGTCCTGGAGTCTCTGAACCGCACCACGCAGTGGGAGTGGTTCCACCCCAAGCTGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS GCA 72 bp CGCTGGTTCAGGATCTTGGTCAGCAGATTCACCAGGTaGTCGTACCTGCCTCCCGCAGGAGGAGTGGGAGGA +
Preference number: 6 (lower is better)
Translates to: RWFRILVSRFTR*SYLPPAGGVGG
Trigger: TCCTCCCACTCCTCCTGCGGGAGGCAGGTACGAGCACCTGGTGAATCTGCTGACCAAGATCCTGAACCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600188.5
CDS CAA 72 bp TACAGGTACTTGTTGGCGCCTGAGCGGCTCTCCTCCTaGGGGATCACGGGCGGCGGCTTCCATACGGACTTA +
Preference number: 6 (lower is better)
Translates to: YRYLLAPERLSS*GITGGGFHTDL
Trigger: TAAGTCCGTATGGAAGCCGCCGCCCGTGATCCCCAAGGAGGAGAGCCGCTCAGGCGCCAACAAGTACCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS CAA 90 bp CACACAAAGTACAGGTACTTGTTGGCGCCTGAGCGGCTCTCCTCCTaGGGGATCACGGGCGGCGGCTTCCATACGGACTTAGGGACGATG +
Preference number: 6 (lower is better)
Translates to: HTKYRYLLAPERLSS*GITGGGFHTDLGTM
Trigger: CATCGTCCCTAAGTCCGTATGGAAGCCGCCGCCCGTGATCCCCAAGGAGGAGAGCCGCTCAGGCGCCAACAAGTACCTGTACTTTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS CCA 72 bp GTGAAGAACTTCTTGATCTTTCGGGCGTTCACGATCTaGGCTGGAGTGACGTGGGGCAGCCGCGTCCATGGC +
Preference number: 6 (lower is better)
Translates to: VKNFLIFRAFTI*AGVTWGSRVHG
Trigger: GCCATGGACGCGGCTGCCCCACGTCACTCCAGCCCAGATCGTGAACGCCCGAAAGATCAAGAAGTTCTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS CCA 72 bp GGCCTCGTTGCCCGGGAAGGGTGGGTAGCTGACGACTaGCGTGTCCAGGTAGCCTGTGAAGAACTTCTTGAT +
Preference number: 6 (lower is better)
Translates to: GLVAREGWVADD*RVQVACEELLD
Trigger: ATCAAGAAGTTCTTCACAGGCTACCTGGACACGCCAGTCGTCAGCTACCCACCCTTCCCGGGCAACGAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS CCA 72 bp CAGACAAGGGGTCCTCAGGCCGCTGGTTCAGGATCTTaGTCAGCAGATTCACCAGGTGCTCGTACCTGCCTC +
Preference number: 6 (lower is better)
Translates to: QTRGPQAAGSGS*SADSPGARTCL
Trigger: GAGGCAGGTACGAGCACCTGGTGAATCTGCTGACCAAGATCCTGAACCAGCGGCCTGAGGACCCCTTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600188.5
CDS CAA 72 bp CATCTCCATGATCTCTGGGCCACTGGGGTACTCTTGTaGAATGGGGGCTGGCAGGGCCGGGTTGAAGCTCTC +
Preference number: 6 (lower is better)
Translates to: HLHDLWATGVLL*NGGWQGRVEAL
Trigger: GAGAGCTTCAACCCGGCCCTGCCAGCCCCCATTCAACAAGAGTACCCCAGTGGCCCAGAGATCATGGAGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS CAA 90 bp GACTCCAGGACAGACAAGGGGTCCTCAGGCCGCTGGTTCAGGATCTaGGTCAGCAGATTCACCAGGTGCTCGTACAGGCTGAGGTCGCAA +
Preference number: 6 (lower is better)
Translates to: DSRTDKGSSGRWFRI*VSRFTRCSYRLRSQ
Trigger: TTGCGACCTCAGCCTGTACGAGCACCTGGTGAATCTGCTGACCAAGATCCTGAACCAGCGGCCTGAGGACCCCTTGTCTGTCCTGGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS GCA 72 bp ATCTTGCCCCAGAAGCGACAGGTGTGGATGGGCTGCTaGTCCACCAGCTGTTTCATGGCCAGGAAAATGCGG +
Preference number: 6 (lower is better)
Translates to: ILPQKRQVWMGC*STSCFMARKMR
Trigger: CCGCATTTTCCTGGCCATGAAACAGCTGGTGGAGCAGCAGCCCATCCACACCTGTCGCTTCTGGGGCAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS CCA 72 bp AGAGACTCCAGGACAGACAAGGGGTCCTCAGGCCGCTaGTTCAGGATCTTGGTCAGCAGATTCACCAGGTGC +
Preference number: 6 (lower is better)
Translates to: RDSRTDKGSSGR*FRILVSRFTRC
Trigger: GCACCTGGTGAATCTGCTGACCAAGATCCTGAACCAGCGGCCTGAGGACCCCTTGTCTGTCCTGGAGTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS CCA 72 bp TTGATTCCCAGGATCTTGCCCCAGAAGCGACAGGTGTaGATGGGCTGCTGCTCCACCAGCTGTTTCATGGCC +
Preference number: 6 (lower is better)
Translates to: LIPRILPQKRQV*MGCCSTSCFMA
Trigger: GGCCATGAAACAGCTGGTGGAGCAGCAGCCCATCCACACCTGTCGCTTCTGGGGCAAGATCCTGGGAATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS CAA 72 bp ACAGACAAGGGGTCCTCAGGCCGCTGGTTCAGGATCTaGGTCAGCAGATTCACCAGGTGCTCGTACAGGCTG +
Preference number: 6 (lower is better)
Translates to: TDKGSSGRWFRI*VSRFTRCSYRL
Trigger: CAGCCTGTACGAGCACCTGGTGAATCTGCTGACCAAGATCCTGAACCAGCGGCCTGAGGACCCCTTGTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000221538.8
ENST00000597055.1
CDS CAA 72 bp ACTCATCTCCATGATCTCTGGGCCACTGGGGTACTCTaGTTGAATGGGGGCTGGCAGGGCCGGGTTGAAGCT +
Preference number: 6 (lower is better)
Translates to: THLHDLWATGVL*LNGGWQGRVEA
Trigger: AGCTTCAACCCGGCCCTGCCAGCCCCCATTCAACAAGAGTACCCCAGTGGCCCAGAGATCATGGAGATGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5
CDS CAA 72 bp ACAGACAAGGGGTCCTCAGGCCGCTGGTTCAGGATCTaGGTCAGCAGATTCACCAGGTGCTCGTACCTGCCT +
Preference number: 6 (lower is better)
Translates to: TDKGSSGRWFRI*VSRFTRCSYLP
Trigger: AGGCAGGTACGAGCACCTGGTGAATCTGCTGACCAAGATCCTGAACCAGCGGCCTGAGGACCCCTTGTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600188.5
CDS GCA 72 bp AGGATCTTGCCCCAGAAGCGACAGGTGTGGATGGGCTaGTGCTCCACCAGCTGTTTCATGGCCAGGAAAATG +
Preference number: 6 (lower is better)
Translates to: RILPQKRQVWMG*CSTSCFMARKM
Trigger: CATTTTCCTGGCCATGAAACAGCTGGTGGAGCAGCAGCCCATCCACACCTGTCGCTTCTGGGGCAAGATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221538.8
ENST00000597055.1
ENST00000600188.5