Pregenerated sensors for RSPH14 (Homo sapiens)
Ensembl gene IDs: ENSG00000100218Ensembl transcript IDs: ENST00000216036.9, ENST00000406876.1, ENST00000421213.1, ENST00000439064.1, ENST00000452757.5
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | CTTCCTTGGTCCGTGTCTAGTCACCCACTCCATGTCTCTCATGCTTaGATAGTCAGTTGTGTTTGCCTGTGTGCCTCCTCACCAGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: LPWSVSSHPLHVSHA*IVSCVCLCASSPEA Trigger: TGCCTCTGGTGAGGAGGCACACAGGCAAACACAACTGACTATCAAAGCATGAGAGACATGGAGTGGGTGACTAGACACGGACCAAGGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452757.5 |
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| 3UTR-3UTR GCA 90 bp | AAGTCACCGTTGGACACACAAGTTGCAGGGGTCTTCCCTGACCACGGGGGCTTCACTCCATGTCTCTCATaGTTTGATAGTCAGTTGTGT | + |
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Preference number: 2 (lower is better) Translates to: KSPLDTQVAGVFPDHGGFTPCLS*FDSQLC Trigger: ACACAACTGACTATCAAAGCATGAGAGACATGGAGT...GAAGCCCCCGTGGTCAGGGAAGACCCCTGCAACTTGTGTGTCCAACGGTGACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000452757.5 |
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| 3UTR-3UTR TCA 90 bp | CATAGTCACCAGATTATTAGTAGCTCAAGGAAAGGCAGGAGGAAGAGTGCTCTGTGTAAGAGGACTGGTTaGGAGCAGCAAGTCCCCTGT | + |
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Preference number: 2 (lower is better) Translates to: HSHQIISSSRKGRRKSALCKRTG*EQQVPC Trigger: ACAGGGGACTTGCTGCTCTCAACCAGTCCTCTTACA...CAGAGCACTCTTCCTCCTGCCTTTCCTTGAGCTACTAATAATCTGGTGACTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439064.1 |
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| 3UTR-3UTR GCA 90 bp | GTTTTGAATCGTCTGGAAAAAGAAAGTCACCGTTGGACACACAAGTTGCAGGGGTTGTGTTTGCCTGTGTaGCTCCTCACCAGAGGCAAG | + |
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Preference number: 2 (lower is better) Translates to: VLNRLEKESHRWTHKLQGLCLPV*LLTRGK Trigger: CTTGCCTCTGGTGAGGAGGCACACAGGCAAACACAA...CCCCTGCAACTTGTGTGTCCAACGGTGACTTTCTTTTTCCAGACGATTCAAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000452757.5 |
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| 3UTR-3UTR CCA 90 bp | GATATGCATTTTGGGGACATAGTCACCAGATTATTAGTAGCTCAAGGAAAGGCAGAAGAGTGCTCTGGGTaGGGGGAGGTTCACAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: DMHFGDIVTRLLVAQGKAEECSG*GEVHRV Trigger: CACCCTGTGAACCTCCCCCCACCCAGAGCACTCTTC...TGCCTTTCCTTGAGCTACTAATAATCTGGTGACTATGTCCCCAAAATGCATATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000439064.1 |
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| 3UTR-3UTR CCA 90 bp | ATGCATTTTGGGGACATAGTCACCAGATTATTAGTAGCTCAAGGAAAGGCAGGAGGCAAAGCTGGCTGGTaGTATCCAATGTTCCTTATC | + |
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Preference number: 2 (lower is better) Translates to: MHFGDIVTRLLVAQGKAGGKAGW*YPMFLI Trigger: GATAAGGAACATTGGATACCACCAGCCAGCTTTGCC...TCCTGCCTTTCCTTGAGCTACTAATAATCTGGTGACTATGTCCCCAAAATGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439064.1 |
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| 3UTR TCA 72 bp | GTCACCGTTGGACACACAAGTTGCAGGGGTCTTCCCTaGCCACGGGGGCTTCCTTGGTCCGTGTCTAGTCAC | + |
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Preference number: 3 (lower is better) Translates to: VTVGHTSCRGLP*PRGLPWSVSSH Trigger: GTGACTAGACACGGACCAAGGAAGCCCCCGTGGTCAGGGAAGACCCCTGCAACTTGTGTGTCCAACGGTGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000452757.5 |
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| 3UTR GCA 72 bp | CTCTCATGCTTTGATAGTCAGTTGTGTTTGCCTGTGTaGCTCCTCACCAGAGGCAAGCAAGAGGGCAGGGAA | + |
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Preference number: 3 (lower is better) Translates to: LSCFDSQLCLPV*LLTRGKQEGRE Trigger: TTCCCTGCCCTCTTGCTTGCCTCTGGTGAGGAGGCACACAGGCAAACACAACTGACTATCAAAGCATGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452757.5 |
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| 3UTR GCA 72 bp | CTCCATGTCTCTCATGCTTTGATAGTCAGTTGTGTTTaGCTGTGTGCCTCCTCACCAGAGGCAAGCAAGAGG | + |
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Preference number: 3 (lower is better) Translates to: LHVSHALIVSCV*LCASSPEASKR Trigger: CCTCTTGCTTGCCTCTGGTGAGGAGGCACACAGGCAAACACAACTGACTATCAAAGCATGAGAGACATGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452757.5 |
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| 3UTR-3UTR CAA 90 bp | GGAAAAAGAAAGTCACCGTTGGACACACAAGTTGCAGGGGTCTTCCCTGACCACTGCTTTGATAGTCAGTaGTGTTTGCCTGTGTGCCTC | + |
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Preference number: 3 (lower is better) Translates to: GKRKSPLDTQVAGVFPDHCFDSQ*CLPVCL Trigger: GAGGCACACAGGCAAACACAACTGACTATCAAAGCA...GTGGTCAGGGAAGACCCCTGCAACTTGTGTGTCCAACGGTGACTTTCTTTTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000452757.5 |
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| 3UTR-3UTR CAA 90 bp | CATAGTCACCAGATTATTAGTAGCTCAAGGAAAGGCAGGAGGAAGAGTGCTCTGATAGAATGTAAAGATTaGGCAAAGCTGGCTGGTGGT | + |
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Preference number: 3 (lower is better) Translates to: HSHQIISSSRKGRRKSALIECKD*AKLAGG Trigger: ACCACCAGCCAGCTTTGCCAAATCTTTACATTCTAT...CAGAGCACTCTTCCTCCTGCCTTTCCTTGAGCTACTAATAATCTGGTGACTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439064.1 |
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| CDS-3UTR CCA 90 bp | AGTCACCGTTGGACACACAAGTTGCAGGGGTCTTCCCTGACCACGGGGGCTTCCCCACGGGGGCTTCCTTaGTCCGTGTCTAGTCACCCA | + |
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Preference number: 4 (lower is better) Translates to: SHRWTHKLQGSSLTTGASPRGLP*SVSSHP Trigger: TGGGTGACTAGACACGGACCAAGGAAGCCCCCGTGG...GGAAGCCCCCGTGGTCAGGGAAGACCCCTGCAACTTGTGTGTCCAACGGTGACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000452757.5 |
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| CDS-3UTR CCA 90 bp | TCACCGTTGGACACACAAGTTGCAGGGGTCTTCCCTGACCACGGGGGCTTCCTTCTACTGCCCACGCTATaGCTTGCCGTGATGTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: SPLDTQVAGVFPDHGGFLLLPTL*LAVMWS Trigger: GCTCCACATCACGGCAAGCCATAGCGTGGGCAGTAG...AAGGAAGCCCCCGTGGTCAGGGAAGACCCCTGCAACTTGTGTGTCCAACGGTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000452757.5 |
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| CDS-3UTR TCA 90 bp | ATCGTCTGGAAAAAGAAAGTCACCGTTGGACACACAAGTTGCAGGGGTCTTCCCCGCTATGGCTTGCCGTaGTGTGGAGCACCTCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: IVWKKKVTVGHTSCRGLPRYGLP*CGAPRW Trigger: CCACCGAGGTGCTCCACATCACGGCAAGCCATAGCG...GGGAAGACCCCTGCAACTTGTGTGTCCAACGGTGACTTTCTTTTTCCAGACGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000452757.5 |
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| CDS-3UTR TCA 90 bp | TTTGAATCGTCTGGAAAAAGAAAGTCACCGTTGGACACACAAGTTGCAGGGGTCTGCAGGGGTCTTCCCTaGCCACGGGGGCTTCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: FESSGKRKSPLDTQVAGVCRGLP*PRGLPW Trigger: CCAAGGAAGCCCCCGTGGTCAGGGAAGACCCCTGCA...GACCCCTGCAACTTGTGTGTCCAACGGTGACTTTCTTTTTCCAGACGATTCAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000452757.5 |
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| CDS-3UTR GCA 90 bp | AAGTCACCGTTGGACACACAAGTTGCAGGGGTCTTCCCTGACCACGGGGGCTTCCCTCGGTGGTCTTTATaGGCACCATACTGTTGCTAT | + |
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Preference number: 4 (lower is better) Translates to: KSPLDTQVAGVFPDHGGFPRWSL*APYCCY Trigger: ATAGCAACAGTATGGTGCGCATAAAGACCACCGAGG...GAAGCCCCCGTGGTCAGGGAAGACCCCTGCAACTTGTGTGTCCAACGGTGACTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000452757.5 |
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| CDS-3UTR TCA 90 bp | CATAGTCACCAGATTATTAGTAGCTCAAGGAAAGGCAGGAGGAAGAGTGCTCTGCGCTATGGCTTGCCGTaGTGTGGAGCACCTCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: HSHQIISSSRKGRRKSALRYGLP*CGAPRW Trigger: CCACCGAGGTGCTCCACATCACGGCAAGCCATAGCG...CAGAGCACTCTTCCTCCTGCCTTTCCTTGAGCTACTAATAATCTGGTGACTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439064.1 |
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| CDS-3UTR GCA 90 bp | GGGGACATAGTCACCAGATTATTAGTAGCTCAAGGAAAGGCAGGAGGAAGAGTGGCCCACGCTATGGCTTaGCGTGATGTGGAGCACCTC | + |
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Preference number: 4 (lower is better) Translates to: GDIVTRLLVAQGKAGGRVAHAMA*RDVEHL Trigger: GAGGTGCTCCACATCACGGCAAGCCATAGCGTGGGC...CACTCTTCCTCCTGCCTTTCCTTGAGCTACTAATAATCTGGTGACTATGTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439064.1 |
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| CDS-3UTR CCA 90 bp | CAGTTGTGTTTGCCTGTGTGCCTCCTCACCAGAGGCAAGCAAGAGGGCAGGGAAAAAGAAAGTCACCGTTaGACACACAAGTTGCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: QLCLPVCLLTRGKQEGREKESHR*THKLQG Trigger: CCCCTGCAACTTGTGTGTCCAACGGTGACTTTCTTT...TTCCCTGCCCTCTTGCTTGCCTCTGGTGAGGAGGCACACAGGCAAACACAACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000452757.5 |
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| CDS-3UTR TCA 90 bp | GTTTTGAATCGTCTGGAAAAAGAAAGTCACCGTTGGACACACAAGTTGCAGGGGGGTCACACAAGGCCATaGGGGCTTTCTGCCTCGTCT | + |
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Preference number: 4 (lower is better) Translates to: VLNRLEKESHRWTHKLQGGHTRP*GLSASS Trigger: AGACGAGGCAGAAAGCCCTCATGGCCTTGTGTGACC...CCCCTGCAACTTGTGTGTCCAACGGTGACTTTCTTTTTCCAGACGATTCAAAAC 51% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000452757.5 |
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| CDS-3UTR GCA 90 bp | GGGGACATAGTCACCAGATTATTAGTAGCTCAAGGAAAGGCAGGAGGAAGAGTGGACCAGCTGCATGTATaGCTTGTACAGGTTCCCCCG | + |
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Preference number: 4 (lower is better) Translates to: GDIVTRLLVAQGKAGGRVDQLHV*LVQVPP Trigger: CGGGGGAACCTGTACAAGGCATACATGCAGCTGGTC...CACTCTTCCTCCTGCCTTTCCTTGAGCTACTAATAATCTGGTGACTATGTCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000439064.1 |
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| CDS-3UTR GCA 90 bp | CCTTGGTCCGTGTCTAGTCACCCACTCCATGTCTCTCATGCTTTGATAGTCAGTTTGTGTTTGCCTGTGTaGCTCCTCACCAGAGGCAAG | + |
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Preference number: 4 (lower is better) Translates to: PWSVSSHPLHVSHALIVSLCLPV*LLTRGK Trigger: CTTGCCTCTGGTGAGGAGGCACACAGGCAAACACAA...ACTGACTATCAAAGCATGAGAGACATGGAGTGGGTGACTAGACACGGACCAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452757.5 |
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| CDS-3UTR CCA 90 bp | GGCAAAGCTGGCTGGTGGTATCCAATGTTCCTTATCACCATCTCTGTACTTCTCTGGCTTGCCGTGATGTaGAGCACCTCGGTGGTCTTT | + |
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Preference number: 4 (lower is better) Translates to: GKAGWWYPMFLITISVLLWLAVM*STSVVF Trigger: AAAGACCACCGAGGTGCTCCACATCACGGCAAGCCA...GAGAAGTACAGAGATGGTGATAAGGAACATTGGATACCACCAGCCAGCTTTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439064.1 |
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| CDS-3UTR CCA 90 bp | TGGTCCGTGTCTAGTCACCCACTCCATGTCTCTCATGCTTTGATAGTCAGTTGTTGGCTTGCCGTGATGTaGAGCACCTCGGTGGTCTTT | + |
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Preference number: 4 (lower is better) Translates to: WSVSSHPLHVSHALIVSCWLAVM*STSVVF Trigger: AAAGACCACCGAGGTGCTCCACATCACGGCAAGCCA...ACAACTGACTATCAAAGCATGAGAGACATGGAGTGGGTGACTAGACACGGACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452757.5 |
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| CDS-3UTR CCA 90 bp | ATGCATTTTGGGGACATAGTCACCAGATTATTAGTAGCTCAAGGAAAGGCAGGACCCGGCAGACTGGGCTaGGGTCATTCAGCAGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: MHFGDIVTRLLVAQGKAGPGRLG*GHSAGR Trigger: CCTTCCTGCTGAATGACCCCAGCCCAGTCTGCCGGG...TCCTGCCTTTCCTTGAGCTACTAATAATCTGGTGACTATGTCCCCAAAATGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439064.1 |
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| CDS-3UTR GCA 90 bp | AGTTGTGTTTGCCTGTGTGCCTCCTCACCAGAGGCAAGCAAGAGGGCAGGGAACACTCCATGTCTCTCATaGTTTGATAGTCAGTTGTGT | + |
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Preference number: 4 (lower is better) Translates to: SCVCLCASSPEASKRAGNTPCLS*FDSQLC Trigger: ACACAACTGACTATCAAAGCATGAGAGACATGGAGT...GTTCCCTGCCCTCTTGCTTGCCTCTGGTGAGGAGGCACACAGGCAAACACAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452757.5 |
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| CDS-3UTR CCA 90 bp | GCAAAGCTGGCTGGTGGTATCCAATGTTCCTTATCACCATCTCTGTACTTCTCTTATCTGCCCACGCTATaGCTTGCCGTGATGTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: AKLAGGIQCSLSPSLYFSYLPTL*LAVMWS Trigger: GCTCCACATCACGGCAAGCCATAGCGTGGGCAGATA...AGAGAAGTACAGAGATGGTGATAAGGAACATTGGATACCACCAGCCAGCTTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439064.1 |
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| CDS-3UTR CCA 90 bp | CATAGTCACCAGATTATTAGTAGCTCAAGGAAAGGCAGGAGGAAGAGTGCTCTGGTTCCTCTAGGCACCTaGACCAGCTGCATGTATGCC | + |
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Preference number: 4 (lower is better) Translates to: HSHQIISSSRKGRRKSALVPLGT*TSCMYA Trigger: GGCATACATGCAGCTGGTCCAGGTGCCTAGAGGAAC...CAGAGCACTCTTCCTCCTGCCTTTCCTTGAGCTACTAATAATCTGGTGACTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439064.1 |
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| CDS-3UTR CCA 90 bp | ATGCATTTTGGGGACATAGTCACCAGATTATTAGTAGCTCAAGGAAAGGCAGGAGAAGAGTGCTCTGGGTaGGGGGAGGTTCACAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: MHFGDIVTRLLVAQGKAGEECSG*GEVHRV Trigger: CACCCTGTGAACCTCCCCCCACCCAGAGCACTCTTC...TCCTGCCTTTCCTTGAGCTACTAATAATCTGGTGACTATGTCCCCAAAATGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000439064.1 |
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| 3UTR CAA 72 bp | ACTCCATGTCTCTCATGCTTTGATAGTCAGTTGTGTTaGCCTGTGTGCCTCCTCACCAGAGGCAAGCAAGAG | + |
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Preference number: 4 (lower is better) Translates to: TPCLSCFDSQLC*PVCLLTRGKQE Trigger: CTCTTGCTTGCCTCTGGTGAGGAGGCACACAGGCAAACACAACTGACTATCAAAGCATGAGAGACATGGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452757.5 |
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| CDS-3UTR GCA 90 bp | GTTTTGAATCGTCTGGAAAAAGAAAGTCACCGTTGGACACACAAGTTGCAGGGGATACACTCGGGGTCATaGATGAGGTCACACAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: VLNRLEKESHRWTHKLQGIHSGS*MRSHKA Trigger: GGCCTTGTGTGACCTCATGCATGACCCCGAGTGTAT...CCCCTGCAACTTGTGTGTCCAACGGTGACTTTCTTTTTCCAGACGATTCAAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000452757.5 |
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| CDS-3UTR GCA 90 bp | CCTTGGTCCGTGTCTAGTCACCCACTCCATGTCTCTCATGCTTTGATAGTCAGTTGCGCACCATACTGTTaGTATCCTTCAGCAAAGCTT | + |
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Preference number: 4 (lower is better) Translates to: PWSVSSHPLHVSHALIVSCAPYC*YPSAKL Trigger: AAGCTTTGCTGAAGGATAGCAACAGTATGGTGCGCA...ACTGACTATCAAAGCATGAGAGACATGGAGTGGGTGACTAGACACGGACCAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452757.5 |
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| CDS-3UTR GCA 90 bp | GGCAAAGCTGGCTGGTGGTATCCAATGTTCCTTATCACCATCTCTGTACTTCTCCCTCGGTGGTCTTTATaGGCACCATACTGTTGCTAT | + |
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Preference number: 4 (lower is better) Translates to: GKAGWWYPMFLITISVLLPRWSL*APYCCY Trigger: ATAGCAACAGTATGGTGCGCATAAAGACCACCGAGG...GAGAAGTACAGAGATGGTGATAAGGAACATTGGATACCACCAGCCAGCTTTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439064.1 |
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| CDS-3UTR GCA 90 bp | TGGTCCGTGTCTAGTCACCCACTCCATGTCTCTCATGCTTTGATAGTCAGTTGTATAGTCAGTTGTGTTTaGCTGTGTGCCTCCTCACCA | + |
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Preference number: 4 (lower is better) Translates to: WSVSSHPLHVSHALIVSCIVSCV*LCASSP Trigger: TGGTGAGGAGGCACACAGGCAAACACAACTGACTAT...ACAACTGACTATCAAAGCATGAGAGACATGGAGTGGGTGACTAGACACGGACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452757.5 |
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| CDS-3UTR CCA 90 bp | TGTTTTGAATCGTCTGGAAAAAGAAAGTCACCGTTGGACACACAAGTTGCAGGGTGTGGAGCACCTCGGTaGTCTTTATGCGCACCATAC | + |
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Preference number: 4 (lower is better) Translates to: CFESSGKRKSPLDTQVAGCGAPR*SLCAPY Trigger: GTATGGTGCGCATAAAGACCACCGAGGTGCTCCACA...CCCTGCAACTTGTGTGTCCAACGGTGACTTTCTTTTTCCAGACGATTCAAAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000452757.5 |
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| CDS-3UTR CCA 90 bp | GGGGACATAGTCACCAGATTATTAGTAGCTCAAGGAAAGGCAGGAGGAAGAGTGGGCAAAGCTGGCTGGTaGTATCCAATGTTCCTTATC | + |
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Preference number: 4 (lower is better) Translates to: GDIVTRLLVAQGKAGGRVGKAGW*YPMFLI Trigger: GATAAGGAACATTGGATACCACCAGCCAGCTTTGCC...CACTCTTCCTCCTGCCTTTCCTTGAGCTACTAATAATCTGGTGACTATGTCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439064.1 |
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| CDS-3UTR GCA 90 bp | GATATGCATTTTGGGGACATAGTCACCAGATTATTAGTAGCTCAAGGAAAGGCAGGCACCTGGACCAGCTaGATGTATGCCTTGTACAGG | + |
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Preference number: 4 (lower is better) Translates to: DMHFGDIVTRLLVAQGKAGTWTS*MYALYR Trigger: CCTGTACAAGGCATACATGCAGCTGGTCCAGGTGCC...TGCCTTTCCTTGAGCTACTAATAATCTGGTGACTATGTCCCCAAAATGCATATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439064.1 |
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| CDS-3UTR CCA 90 bp | ATGCATTTTGGGGACATAGTCACCAGATTATTAGTAGCTCAAGGAAAGGCAGGATGTGGAGCACCTCGGTaGTCTTTATGCGCACCATAC | + |
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Preference number: 4 (lower is better) Translates to: MHFGDIVTRLLVAQGKAGCGAPR*SLCAPY Trigger: GTATGGTGCGCATAAAGACCACCGAGGTGCTCCACA...TCCTGCCTTTCCTTGAGCTACTAATAATCTGGTGACTATGTCCCCAAAATGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439064.1 |
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| CDS-3UTR GCA 90 bp | ATGCATTTTGGGGACATAGTCACCAGATTATTAGTAGCTCAAGGAAAGGCAGGAGCAAGGACGATGTCGTaGTCTAGAAAGGCGTATCTG | + |
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Preference number: 4 (lower is better) Translates to: MHFGDIVTRLLVAQGKAGARTMS*SRKAYL Trigger: CAGATACGCCTTTCTAGAGCACGACATCGTCCTTGC...TCCTGCCTTTCCTTGAGCTACTAATAATCTGGTGACTATGTCCCCAAAATGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439064.1 |
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| CDS-3UTR CCA 90 bp | TGTTTTGAATCGTCTGGAAAAAGAAAGTCACCGTTGGACACACAAGTTGCAGGGTACAGCCTATGTTCATaGCCTTGTAGATACACTCGG | + |
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Preference number: 4 (lower is better) Translates to: CFESSGKRKSPLDTQVAGYSLCS*PCRYTR Trigger: CCGAGTGTATCTACAAGGCCATGAACATAGGCTGTA...CCCTGCAACTTGTGTGTCCAACGGTGACTTTCTTTTTCCAGACGATTCAAAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000452757.5 |
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| CDS CCA 90 bp | CCACTTGAGGCTTTTCGTAAGTCTCCACCTCCATGGCACGGAAAGTaGGCACGTGCGTCTGCAGGGCCTTGCGGCCCTCGGGGGCCTCTG | + |
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Preference number: 5 (lower is better) Translates to: PLEAFRKSPPPWHGK*ARASAGPCGPRGPL Trigger: CAGAGGCCCCCGAGGGCCGCAAGGCCCTGCAGACGCACGTGCCCACTTTCCGTGCCATGGAGGTGGAGACTTACGAAAAGCCTCAAGTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000216036.9 |
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| CDS CCA 90 bp | GTAAGGCTTCGGCCACTTGAGGCTTTTCGTAAGTCTCCACCTCCATaGCACGGAAAGTGGGCACGTGCGTCTGCAGGGCCTTGCGGCCCT | + |
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Preference number: 5 (lower is better) Translates to: VRLRPLEAFRKSPPP*HGKWARASAGPCGP Trigger: AGGGCCGCAAGGCCCTGCAGACGCACGTGCCCACTTTCCGTGCCATGGAGGTGGAGACTTACGAAAAGCCTCAAGTGGCCGAAGCCTTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216036.9 |
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| CDS CCA 90 bp | CCAGCTGCATGTATGCCTTGTACAGGTTCCCCCGGCAGACTGGGCTaGGGTCATTCAGCAGGAAGGACAGGGCAAGGACGATGTCGTGCT | + |
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Preference number: 5 (lower is better) Translates to: PAACMPCTGSPGRLG*GHSAGRTGQGRCRA Trigger: AGCACGACATCGTCCTTGCCCTGTCCTTCCTGCTGAATGACCCCAGCCCAGTCTGCCGGGGGAACCTGTACAAGGCATACATGCAGCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000216036.9 ENST00000439064.1 |
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| CDS CCA 90 bp | CTGGACCAGCTGCATGTATGCCTTGTACAGGTTCCCCCGGCAGACTaGGCTGGGGTCATTCAGCAGGAAGGACAGGGCAAGGACGATGTC | + |
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Preference number: 5 (lower is better) Translates to: LDQLHVCLVQVPPAD*AGVIQQEGQGKDDV Trigger: GACATCGTCCTTGCCCTGTCCTTCCTGCTGAATGACCCCAGCCCAGTCTGCCGGGGGAACCTGTACAAGGCATACATGCAGCTGGTCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000216036.9 ENST00000439064.1 |
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| CDS GCA 90 bp | CACTCGGGGTCATGCATGAGGTCACACAAGGCCATGAGGGCTTTCTaGCTCGTCTGGAGGTCCTCTGACTGCAGCTCCTCCTTCAGCTTG | + |
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Preference number: 5 (lower is better) Translates to: HSGSCMRSHKAMRAF*LVWRSSDCSSSFSL Trigger: CAAGCTGAAGGAGGAGCTGCAGTCAGAGGACCTCCAGACGAGGCAGAAAGCCCTCATGGCCTTGTGTGACCTCATGCATGACCCCGAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000216036.9 ENST00000406876.1 |
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| CDS-3UTR CAA 90 bp | AAGTCACCGTTGGACACACAAGTTGCAGGGGTCTTCCCTGACCACGGGGGCTTCCGTTGGACACACAAGTaGCAGGGGTCTTCCCTGACC | + |
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Preference number: 5 (lower is better) Translates to: KSPLDTQVAGVFPDHGGFRWTHK*QGSSLT Trigger: GGTCAGGGAAGACCCCTGCAACTTGTGTGTCCAACG...GAAGCCCCCGTGGTCAGGGAAGACCCCTGCAACTTGTGTGTCCAACGGTGACTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000452757.5 |
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| CDS GCA 90 bp | GCTTATTCCTCAGGTTCCTCTAGGCACCTGGACCAGCTGCATGTATaGCTTGTACAGGTTCCCCCGGCAGACTGGGCTGGGGTCATTCAG | + |
|
Preference number: 5 (lower is better) Translates to: AYSSGSSRHLDQLHV*LVQVPPADWAGVIQ Trigger: CTGAATGACCCCAGCCCAGTCTGCCGGGGGAACCTGTACAAGGCATACATGCAGCTGGTCCAGGTGCCTAGAGGAACCTGAGGAATAAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000439064.1 |
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| CDS CCA 90 bp | ATGCTGACATTAAGGAGCGCACGGGCGGCCTTGCTGCGGATGTTCTaGTTGGCGCTGAGGAGCTTCTGCTTCAGGACAAGCACCACATTG | + |
|
Preference number: 5 (lower is better) Translates to: MLTLRSARAALLRMF*LALRSFCFRTSTTL Trigger: CAATGTGGTGCTTGTCCTGAAGCAGAAGCTCCTCAGCGCCAACCAGAACATCCGCAGCAAGGCCGCCCGTGCGCTCCTTAATGTCAGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216036.9 |
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| CDS GCA 90 bp | ATCACTGTGGCGAACATCAGGGCACCGGCAGCGTTAGACTTCACATaGTCCACTGGGTCTTTCAGCAGATGGACCAGGATGGGGATGACG | + |
|
Preference number: 5 (lower is better) Translates to: ITVANIRAPAALDFT*STGSFSRWTRMGMT Trigger: CGTCATCCCCATCCTGGTCCATCTGCTGAAAGACCCAGTGGAGCATGTGAAGTCTAACGCTGCCGGTGCCCTGATGTTCGCCACAGTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216036.9 |
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| CDS GCA 90 bp | CAGTCCTGCGCCAGCCTCGCGGGACACGTGTTGTACATAAGCCTCTaGAGTGTCCTCTTGTTAATGGTGGGGTTTTCTGCTCTAGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: QSCASLAGHVLYISL*SVLLLMVGFSALGT Trigger: GGTGCCTAGAGCAGAAAACCCCACCATTAACAAGAGGACACTGCAGAGGCTTATGTACAACACGTGTCCCGCGAGGCTGGCGCAGGACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000421213.1 |
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| CDS CCA 90 bp | TCCCCCTTCCTGTCACTACTGCCCACGCTATGGCTTGCCGTGATGTaGAGCACCTCGGTGGTCTTTATGCGCACCATACTGTTGCTATCC | + |
|
Preference number: 5 (lower is better) Translates to: SPFLSLLPTLWLAVM*STSVVFMRTILLLS Trigger: GGATAGCAACAGTATGGTGCGCATAAAGACCACCGAGGTGCTCCACATCACGGCAAGCCATAGCGTGGGCAGTAGTGACAGGAAGGGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000452757.5 |
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| CDS CCA 90 bp | GGCGAACATCAGGGCACCGGCAGCGTTAGACTTCACATGCTCCACTaGGTCTTTCAGCAGATGGACCAGGATGGGGATGACGTCAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: GEHQGTGSVRLHMLH*VFQQMDQDGDDVKM Trigger: CATTTTGACGTCATCCCCATCCTGGTCCATCTGCTGAAAGACCCAGTGGAGCATGTGAAGTCTAACGCTGCCGGTGCCCTGATGTTCGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216036.9 |
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| CDS CCA 90 bp | CCCTTCCTGTCACTACTTCTGCCCACGCTATGGCTTGCCGTGATGTaGAGCACCTCGGTGGTCTTTATGCGCACCATACTGTTGCTATCC | + |
|
Preference number: 5 (lower is better) Translates to: PFLSLLLPTLWLAVM*STSVVFMRTILLLS Trigger: GGATAGCAACAGTATGGTGCGCATAAAGACCACCGAGGTGCTCCACATCACGGCAAGCCATAGCGTGGGCAGAAGTAGTGACAGGAAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000406876.1 |
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| CDS CCA 90 bp | TGCTCTAGAAAGGCGTATCTGCCCACGCTATGGCTTGCCGTGATGTaGAGCACCTCGGTGGTCTTTATGCGCACCATACTGTTGCTATCC | + |
|
Preference number: 5 (lower is better) Translates to: CSRKAYLPTLWLAVM*STSVVFMRTILLLS Trigger: GGATAGCAACAGTATGGTGCGCATAAAGACCACCGAGGTGCTCCACATCACGGCAAGCCATAGCGTGGGCAGATACGCCTTTCTAGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000216036.9 ENST00000439064.1 |
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| CDS-3UTR CAA 90 bp | AAGTCACCGTTGGACACACAAGTTGCAGGGGTCTTCCCTGACCACGGGGGCTTCAAAAGAAAGTCACCGTaGGACACACAAGTTGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: KSPLDTQVAGVFPDHGGFKRKSP*DTQVAG Trigger: CCCTGCAACTTGTGTGTCCAACGGTGACTTTCTTTT...GAAGCCCCCGTGGTCAGGGAAGACCCCTGCAACTTGTGTGTCCAACGGTGACTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000452757.5 |
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| CDS GCA 90 bp | ATCTGTCTCTCTGCTCCAAAGAAATTTTGGAGTGAGTGGCAGTCCTaGGCCAGCCTCGCGGGACACGTGTTGTACATAAGCCTCTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: ICLSAPKKFWSEWQS*ASLAGHVLYISLCS Trigger: ACTGCAGAGGCTTATGTACAACACGTGTCCCGCGAGGCTGGCGCAGGACTGCCACTCACTCCAAAATTTCTTTGGAGCAGAGAGACAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421213.1 |
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| CDS CCA 90 bp | ATCTGGACGATCTGTCTCTCTGCTCCAAAGAAATTTTGGAGTGAGTaGCAGTCCTGCGCCAGCCTCGCGGGACACGTGTTGTACATAAGC | + |
|
Preference number: 5 (lower is better) Translates to: IWTICLSAPKKFWSE*QSCASLAGHVLYIS Trigger: GCTTATGTACAACACGTGTCCCGCGAGGCTGGCGCAGGACTGCCACTCACTCCAAAATTTCTTTGGAGCAGAGAGACAGATCGTCCAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421213.1 |
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| CDS TCA 90 bp | TCTGGGAATGGGCCATCTTTCCCCAACTACAGAGGCCTTTCCAAATaGAGCTCTGCAGAAACCACTCACGTGAGCTCTAGAAGCCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SGNGPSFPNYRGLSK*SSAETTHVSSRSQA Trigger: TGCCTGGCTTCTAGAGCTCACGTGAGTGGTTTCTGCAGAGCTTCATTTGGAAAGGCCTCTGTAGTTGGGGAAAGATGGCCCATTCCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000406876.1 |
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| CDS TCA 90 bp | TGTTATCTGGACGATCTGTCTCTCTGCTCCAAAGAAATTTTGGAGTaGGTGGCAGTCCTGCGCCAGCCTCGCGGGACACGTGTTGTACAT | + |
|
Preference number: 5 (lower is better) Translates to: CYLDDLSLCSKEILE*VAVLRQPRGTRVVH Trigger: ATGTACAACACGTGTCCCGCGAGGCTGGCGCAGGACTGCCACTCACTCCAAAATTTCTTTGGAGCAGAGAGACAGATCGTCCAGATAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421213.1 |
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| CDS CCA 90 bp | AAAGTTGTTATCTGGACGATCTGTCTCTCTGCTCCAAAGAAATTTTaGAGTGAGTGGCAGTCCTGCGCCAGCCTCGCGGGACACGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: KVVIWTICLSAPKKF*SEWQSCASLAGHVL Trigger: CAACACGTGTCCCGCGAGGCTGGCGCAGGACTGCCACTCACTCCAAAATTTCTTTGGAGCAGAGAGACAGATCGTCCAGATAACAACTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421213.1 |
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| CDS-3UTR CAA 90 bp | GGGGACATAGTCACCAGATTATTAGTAGCTCAAGGAAAGGCAGGAGGAAGAGTGAGCTGCATGTATGCCTaGTACAGGTTCCCCCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GDIVTRLLVAQGKAGGRVSCMYA*YRFPRQ Trigger: CTGCCGGGGGAACCTGTACAAGGCATACATGCAGCT...CACTCTTCCTCCTGCCTTTCCTTGAGCTACTAATAATCTGGTGACTATGTCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000439064.1 |
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| CDS-3UTR CAA 90 bp | GGAAAAAGAAAGTCACCGTTGGACACACAAGTTGCAGGGGTCTTCCCTGACCACGATAGTCAGTTGTGTTaGCCTGTGTGCCTCCTCACC | + |
|
Preference number: 5 (lower is better) Translates to: GKRKSPLDTQVAGVFPDHDSQLC*PVCLLT Trigger: GGTGAGGAGGCACACAGGCAAACACAACTGACTATC...GTGGTCAGGGAAGACCCCTGCAACTTGTGTGTCCAACGGTGACTTTCTTTTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000452757.5 |
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| CDS TCA 90 bp | TCACATGCTCCACTGGGTCTTTCAGCAGATGGACCAGGATGGGGATaGCGTCAAAATGACACACCTGTTTCTTGCCCTCTCGAGATATGC | + |
|
Preference number: 5 (lower is better) Translates to: SHAPLGLSADGPGWG*RQNDTPVSCPLEIC Trigger: GCATATCTCGAGAGGGCAAGAAACAGGTGTGTCATTTTGACGTCATCCCCATCCTGGTCCATCTGCTGAAAGACCCAGTGGAGCATGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216036.9 |
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| CDS CCA 90 bp | TGGGTGGCATTGATGTTAATGGGAAGCTCCAAGGAGTTCTGGGAATaGGCCATCTTTCCCCAACTACAGAGGCCTTTCCAAATGAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: WVALMLMGSSKEFWE*AIFPQLQRPFQMKL Trigger: GAGCTTCATTTGGAAAGGCCTCTGTAGTTGGGGAAAGATGGCCCATTCCCAGAACTCCTTGGAGCTTCCCATTAACATCAATGCCACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000216036.9 ENST00000406876.1 |
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| CDS TCA 90 bp | ACTGGGTCTTTCAGCAGATGGACCAGGATGGGGATGACGTCAAAATaGCACACCTGTTTCTTGCCCTCTCGAGATATGCTGACATTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: TGSFSRWTRMGMTSK*HTCFLPSRDMLTLR Trigger: CCTTAATGTCAGCATATCTCGAGAGGGCAAGAAACAGGTGTGTCATTTTGACGTCATCCCCATCCTGGTCCATCTGCTGAAAGACCCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216036.9 |
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| CDS-3UTR CAA 90 bp | TGTTTTGAATCGTCTGGAAAAAGAAAGTCACCGTTGGACACACAAGTTGCAGGGATGCGCACCATACTGTaGCTATCCTTCAGCAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: CFESSGKRKSPLDTQVAGMRTIL*LSFSKA Trigger: AGCTTTGCTGAAGGATAGCAACAGTATGGTGCGCAT...CCCTGCAACTTGTGTGTCCAACGGTGACTTTCTTTTTCCAGACGATTCAAAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000452757.5 |
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| CDS-3UTR CAA 90 bp | TGTTTTGAATCGTCTGGAAAAAGAAAGTCACCGTTGGACACACAAGTTGCAGGGTGCTTTGATAGTCAGTaGTGTTTGCCTGTGTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: CFESSGKRKSPLDTQVAGCFDSQ*CLPVCL Trigger: GAGGCACACAGGCAAACACAACTGACTATCAAAGCA...CCCTGCAACTTGTGTGTCCAACGGTGACTTTCTTTTTCCAGACGATTCAAAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000452757.5 |
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| CDS-3UTR CAA 90 bp | TGGTCCGTGTCTAGTCACCCACTCCATGTCTCTCATGCTTTGATAGTCAGTTGTCACTTATGGTGTGTTTaGAATCGTCTGGAAAAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: WSVSSHPLHVSHALIVSCHLWCV*NRLEKE Trigger: TTCTTTTTCCAGACGATTCAAAACACACCATAAGTG...ACAACTGACTATCAAAGCATGAGAGACATGGAGTGGGTGACTAGACACGGACCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000452757.5 |
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| CDS-3UTR CAA 90 bp | ATGCATTTTGGGGACATAGTCACCAGATTATTAGTAGCTCAAGGAAAGGCAGGAATAGAATGTAAAGATTaGGCAAAGCTGGCTGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: MHFGDIVTRLLVAQGKAGIECKD*AKLAGG Trigger: ACCACCAGCCAGCTTTGCCAAATCTTTACATTCTAT...TCCTGCCTTTCCTTGAGCTACTAATAATCTGGTGACTATGTCCCCAAAATGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439064.1 |
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| CDS CAA 72 bp | ATGGCACGGAAAGTGGGCACGTGCGTCTGCAGGGCCTaGCGGCCCTCGGGGGCCTCTGCCAGCATGGTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: MARKVGTCVCRA*RPSGASASMVR Trigger: CCTTACCATGCTGGCAGAGGCCCCCGAGGGCCGCAAGGCCCTGCAGACGCACGTGCCCACTTTCCGTGCCAT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000216036.9 |
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| CDS GCA 72 bp | TTGGGCCCCTCTAGGCACCTGGACCAGCTGCATGTATaGCTTGTACAGGTTCCCCCGGCAGACTGGGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LGPSRHLDQLHV*LVQVPPADWAG Trigger: CCCAGCCCAGTCTGCCGGGGGAACCTGTACAAGGCATACATGCAGCTGGTCCAGGTGCCTAGAGGGGCCCAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000216036.9 |
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| CDS CCA 72 bp | GCTTTTCGTAAGTCTCCACCTCCATGGCACGGAAAGTaGGCACGTGCGTCTGCAGGGCCTTGCGGCCCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: AFRKSPPPWHGK*ARASAGPCGPR Trigger: CCGAGGGCCGCAAGGCCCTGCAGACGCACGTGCCCACTTTCCGTGCCATGGAGGTGGAGACTTACGAAAAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216036.9 |
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| CDS CAA 72 bp | AGGAGCGCACGGGCGGCCTTGCTGCGGATGTTCTGGTaGGCGCTGAGGAGCTTCTGCTTCAGGACAAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: RSARAALLRMFW*ALRSFCFRTST Trigger: GGTGCTTGTCCTGAAGCAGAAGCTCCTCAGCGCCAACCAGAACATCCGCAGCAAGGCCGCCCGTGCGCTCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216036.9 |
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| CDS CAA 90 bp | TTCTGGTTGGCGCTGAGGAGCTTCTGCTTCAGGACAAGCACCACATaGCTGCCCAGGGCCTCGGTGGCATCCTCCTGCAGGCAGAGGACC | + |
|
Preference number: 6 (lower is better) Translates to: FWLALRSFCFRTSTT*LPRASVASSCRQRT Trigger: GGTCCTCTGCCTGCAGGAGGATGCCACCGAGGCCCTGGGCAGCAATGTGGTGCTTGTCCTGAAGCAGAAGCTCCTCAGCGCCAACCAGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216036.9 |
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| CDS TCA 72 bp | CACGGGCGGCCTTGCTGCGGATGTTCTGGTTGGCGCTaGGGAGCTTCTGCTTCAGGACAAGCACCACATTGC | + |
|
Preference number: 6 (lower is better) Translates to: HGRPCCGCSGWR*GASASGQAPHC Trigger: GCAATGTGGTGCTTGTCCTGAAGCAGAAGCTCCTCAGCGCCAACCAGAACATCCGCAGCAAGGCCGCCCGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216036.9 |
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| CDS GCA 72 bp | TCAGGTTCCTCTAGGCACCTGGACCAGCTGCATGTATaGCTTGTACAGGTTCCCCCGGCAGACTGGGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SGSSRHLDQLHV*LVQVPPADWAG Trigger: CCCAGCCCAGTCTGCCGGGGGAACCTGTACAAGGCATACATGCAGCTGGTCCAGGTGCCTAGAGGAACCTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000439064.1 |
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| CDS CCA 72 bp | TTAAGGAGCGCACGGGCGGCCTTGCTGCGGATGTTCTaGTTGGCGCTGAGGAGCTTCTGCTTCAGGACAAGC | + |
|
Preference number: 6 (lower is better) Translates to: LRSARAALLRMF*LALRSFCFRTS Trigger: GCTTGTCCTGAAGCAGAAGCTCCTCAGCGCCAACCAGAACATCCGCAGCAAGGCCGCCCGTGCGCTCCTTAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216036.9 |
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| CDS CCA 72 bp | CGGCCACTTGAGGCTTTTCGTAAGTCTCCACCTCCATaGCACGGAAAGTGGGCACGTGCGTCTGCAGGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: RPLEAFRKSPPP*HGKWARASAGP Trigger: AGGCCCTGCAGACGCACGTGCCCACTTTCCGTGCCATGGAGGTGGAGACTTACGAAAAGCCTCAAGTGGCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216036.9 |
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| CDS CAA 72 bp | GTTCCTCTAGGCACCTGGACCAGCTGCATGTATGCCTaGTACAGGTTCCCCCGGCAGACTGGGCTGGGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: VPLGTWTSCMYA*YRFPRQTGLGS Trigger: TGACCCCAGCCCAGTCTGCCGGGGGAACCTGTACAAGGCATACATGCAGCTGGTCCAGGTGCCTAGAGGAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000439064.1 |
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| CDS CCA 72 bp | TGTATGCCTTGTACAGGTTCCCCCGGCAGACTGGGCTaGGGTCATTCAGCAGGAAGGACAGGGCAAGGACGA | + |
|
Preference number: 6 (lower is better) Translates to: CMPCTGSPGRLG*GHSAGRTGQGR Trigger: TCGTCCTTGCCCTGTCCTTCCTGCTGAATGACCCCAGCCCAGTCTGCCGGGGGAACCTGTACAAGGCATACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000216036.9 ENST00000439064.1 |
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| CDS CAA 72 bp | CGAGATATGCTGACATTAAGGAGCGCACGGGCGGCCTaGCTGCGGATGTTCTGGTTGGCGCTGAGGAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RDMLTLRSARAA*LRMFWLALRSF Trigger: GAAGCTCCTCAGCGCCAACCAGAACATCCGCAGCAAGGCCGCCCGTGCGCTCCTTAATGTCAGCATATCTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216036.9 |
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| CDS CAA 90 bp | CTGACATTAAGGAGCGCACGGGCGGCCTTGCTGCGGATGTTCTGGTaGGCGCTGAGGAGCTTCTGCTTCAGGACAAGCACCACATTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LTLRSARAALLRMFW*ALRSFCFRTSTTLL Trigger: CAGCAATGTGGTGCTTGTCCTGAAGCAGAAGCTCCTCAGCGCCAACCAGAACATCCGCAGCAAGGCCGCCCGTGCGCTCCTTAATGTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216036.9 |
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| CDS CAA 90 bp | TTGCCCTCTCGAGATATGCTGACATTAAGGAGCGCACGGGCGGCCTaGCTGCGGATGTTCTGGTTGGCGCTGAGGAGCTTCTGCTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LPSRDMLTLRSARAA*LRMFWLALRSFCFR Trigger: CCTGAAGCAGAAGCTCCTCAGCGCCAACCAGAACATCCGCAGCAAGGCCGCCCGTGCGCTCCTTAATGTCAGCATATCTCGAGAGGGCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216036.9 |
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| CDS CAA 90 bp | ATTCCTCAGGTTCCTCTAGGCACCTGGACCAGCTGCATGTATGCCTaGTACAGGTTCCCCCGGCAGACTGGGCTGGGGTCATTCAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: IPQVPLGTWTSCMYA*YRFPRQTGLGSFSR Trigger: CCTGCTGAATGACCCCAGCCCAGTCTGCCGGGGGAACCTGTACAAGGCATACATGCAGCTGGTCCAGGTGCCTAGAGGAACCTGAGGAAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000439064.1 |
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| CDS TCA 72 bp | CCTTCCTGTCACTACTGCCCACGCTATGGCTTGCCGTaGTGTGGAGCACCTCGGTGGTCTTTATGCGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: PSCHYCPRYGLP*CGAPRWSLCAP Trigger: TGGTGCGCATAAAGACCACCGAGGTGCTCCACATCACGGCAAGCCATAGCGTGGGCAGTAGTGACAGGAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452757.5 |
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| CDS GCA 72 bp | TCATGCATGAGGTCACACAAGGCCATGAGGGCTTTCTaGCTCGTCTGGAGGTCCTCTGACTGCAGCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SCMRSHKAMRAF*LVWRSSDCSSS Trigger: GGAGGAGCTGCAGTCAGAGGACCTCCAGACGAGGCAGAAAGCCCTCATGGCCTTGTGTGACCTCATGCATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000216036.9 ENST00000406876.1 |
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| CDS GCA 72 bp | TTCCCCCTTCCTGTCACTACTGCCCACGCTATGGCTTaGCGTGATGTGGAGCACCTCGGTGGTCTTTATGCG | + |
|
Preference number: 6 (lower is better) Translates to: FPLPVTTAHAMA*RDVEHLGGLYA Trigger: CGCATAAAGACCACCGAGGTGCTCCACATCACGGCAAGCCATAGCGTGGGCAGTAGTGACAGGAAGGGGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000452757.5 |
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| CDS CCA 72 bp | AGGTCACACAAGGCCATGAGGGCTTTCTGCCTCGTCTaGAGGTCCTCTGACTGCAGCTCCTCCTTCAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: RSHKAMRAFCLV*RSSDCSSSFSL Trigger: CAAGCTGAAGGAGGAGCTGCAGTCAGAGGACCTCCAGACGAGGCAGAAAGCCCTCATGGCCTTGTGTGACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000216036.9 ENST00000406876.1 |
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| CDS CCA 72 bp | CAGGGCACCGGCAGCGTTAGACTTCACATGCTCCACTaGGTCTTTCAGCAGATGGACCAGGATGGGGATGAC | + |
|
Preference number: 6 (lower is better) Translates to: QGTGSVRLHMLH*VFQQMDQDGDD Trigger: GTCATCCCCATCCTGGTCCATCTGCTGAAAGACCCAGTGGAGCATGTGAAGTCTAACGCTGCCGGTGCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216036.9 |
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| CDS CAA 90 bp | TCCACCTCCACCTGCAGCTTCCATACCAGTGAGGAAATCAGACCTTaGCTGATGATCTCTTGGGCCCCTCTAGGCACCTGGACCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: STSTCSFHTSEEIRP*LMISWAPLGTWTSC Trigger: GCAGCTGGTCCAGGTGCCTAGAGGGGCCCAAGAGATCATCAGCAAAGGTCTGATTTCCTCACTGGTATGGAAGCTGCAGGTGGAGGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216036.9 |
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| CDS TCA 72 bp | CTAGAAAGGCGTATCTGCCCACGCTATGGCTTGCCGTaGTGTGGAGCACCTCGGTGGTCTTTATGCGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: LERRICPRYGLP*CGAPRWSLCAP Trigger: TGGTGCGCATAAAGACCACCGAGGTGCTCCACATCACGGCAAGCCATAGCGTGGGCAGATACGCCTTTCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000216036.9 ENST00000439064.1 |
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| CDS TCA 72 bp | TCCTGTCACTACTTCTGCCCACGCTATGGCTTGCCGTaGTGTGGAGCACCTCGGTGGTCTTTATGCGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: SCHYFCPRYGLP*CGAPRWSLCAP Trigger: TGGTGCGCATAAAGACCACCGAGGTGCTCCACATCACGGCAAGCCATAGCGTGGGCAGAAGTAGTGACAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000406876.1 |
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| CDS TCA 72 bp | GACGATCTGTCTCTCTGCTCCAAAGAAATTTTGGAGTaGGTGGCAGTCCTGCGCCAGCCTCGCGGGACACGT | + |
|
Preference number: 6 (lower is better) Translates to: DDLSLCSKEILE*VAVLRQPRGTR Trigger: ACGTGTCCCGCGAGGCTGGCGCAGGACTGCCACTCACTCCAAAATTTCTTTGGAGCAGAGAGACAGATCGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421213.1 |
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| CDS GCA 72 bp | GCGAACATCAGGGCACCGGCAGCGTTAGACTTCACATaGTCCACTGGGTCTTTCAGCAGATGGACCAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: ANIRAPAALDFT*STGSFSRWTRM Trigger: CATCCTGGTCCATCTGCTGAAAGACCCAGTGGAGCATGTGAAGTCTAACGCTGCCGGTGCCCTGATGTTCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216036.9 |
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| CDS CCA 72 bp | AAGGCGTATCTGCCCACGCTATGGCTTGCCGTGATGTaGAGCACCTCGGTGGTCTTTATGCGCACCATACTG | + |
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Preference number: 6 (lower is better) Translates to: KAYLPTLWLAVM*STSVVFMRTIL Trigger: CAGTATGGTGCGCATAAAGACCACCGAGGTGCTCCACATCACGGCAAGCCATAGCGTGGGCAGATACGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000216036.9 ENST00000439064.1 |
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| CDS CCA 72 bp | CTGTCACTACTGCCCACGCTATGGCTTGCCGTGATGTaGAGCACCTCGGTGGTCTTTATGCGCACCATACTG | + |
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Preference number: 6 (lower is better) Translates to: LSLLPTLWLAVM*STSVVFMRTIL Trigger: CAGTATGGTGCGCATAAAGACCACCGAGGTGCTCCACATCACGGCAAGCCATAGCGTGGGCAGTAGTGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452757.5 |
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| CDS CAA 72 bp | GAGTGGCAGTCCTGCGCCAGCCTCGCGGGACACGTGTaGTACATAAGCCTCTGCAGTGTCCTCTTGTTAATG | + |
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Preference number: 6 (lower is better) Translates to: EWQSCASLAGHV*YISLCSVLLLM Trigger: CATTAACAAGAGGACACTGCAGAGGCTTATGTACAACACGTGTCCCGCGAGGCTGGCGCAGGACTGCCACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421213.1 |
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| CDS CAA 90 bp | AGCCTCGCGGGACACGTGTTGTACATAAGCCTCTGCAGTGTCCTCTaGTTAATGGTGGGGTTTTCTGCTCTAGGCACCTGGACCAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SLAGHVLYISLCSVL*LMVGFSALGTWTSC Trigger: GCAGCTGGTCCAGGTGCCTAGAGCAGAAAACCCCACCATTAACAAGAGGACACTGCAGAGGCTTATGTACAACACGTGTCCCGCGAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000421213.1 |
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| CDS TCA 72 bp | GGGCCATCTTTCCCCAACTACAGAGGCCTTTCCAAATaGAGCTCTGCAGAAACCACTCACTGCCTCCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: GPSFPNYRGLSK*SSAETTHCLRS Trigger: GCTGCGGAGGCAGTGAGTGGTTTCTGCAGAGCTTCATTTGGAAAGGCCTCTGTAGTTGGGGAAAGATGGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216036.9 |
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| CDS CCA 72 bp | TCACTACTTCTGCCCACGCTATGGCTTGCCGTGATGTaGAGCACCTCGGTGGTCTTTATGCGCACCATACTG | + |
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Preference number: 6 (lower is better) Translates to: SLLLPTLWLAVM*STSVVFMRTIL Trigger: CAGTATGGTGCGCATAAAGACCACCGAGGTGCTCCACATCACGGCAAGCCATAGCGTGGGCAGAAGTAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000406876.1 |
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| CDS CCA 72 bp | ATCTGTCTCTCTGCTCCAAAGAAATTTTGGAGTGAGTaGCAGTCCTGCGCCAGCCTCGCGGGACACGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: ICLSAPKKFWSE*QSCASLAGHVL Trigger: CAACACGTGTCCCGCGAGGCTGGCGCAGGACTGCCACTCACTCCAAAATTTCTTTGGAGCAGAGAGACAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421213.1 |
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| CDS CCA 72 bp | ATCTGGACGATCTGTCTCTCTGCTCCAAAGAAATTTTaGAGTGAGTGGCAGTCCTGCGCCAGCCTCGCGGGA | + |
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Preference number: 6 (lower is better) Translates to: IWTICLSAPKKF*SEWQSCASLAG Trigger: TCCCGCGAGGCTGGCGCAGGACTGCCACTCACTCCAAAATTTCTTTGGAGCAGAGAGACAGATCGTCCAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421213.1 |
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| CDS CAA 90 bp | TTTTGGAGTGAGTGGCAGTCCTGCGCCAGCCTCGCGGGACACGTGTaGTACATAAGCCTCTGCAGTGTCCTCTTGTTAATGGTGGGGTTT | + |
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Preference number: 6 (lower is better) Translates to: FWSEWQSCASLAGHV*YISLCSVLLLMVGF Trigger: AAACCCCACCATTAACAAGAGGACACTGCAGAGGCTTATGTACAACACGTGTCCCGCGAGGCTGGCGCAGGACTGCCACTCACTCCAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000421213.1 |
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| CDS GCA 72 bp | TCATTCAGCAGGAAGGACAGGGCAAGGACGATGTCGTaGTCTAGAAAGGCGTATCTGCCCACGCTATGGCTT | + |
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Preference number: 6 (lower is better) Translates to: SFSRKDRARTMS*SRKAYLPTLWL Trigger: AAGCCATAGCGTGGGCAGATACGCCTTTCTAGAGCACGACATCGTCCTTGCCCTGTCCTTCCTGCTGAATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000216036.9 ENST00000439064.1 |
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| CDS GCA 72 bp | GCCAGCCTCGCGGGACACGTGTTGTACATAAGCCTCTaGAGTGTCCTCTTGTTAATGGTGGGGTTTTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: ASLAGHVLYISL*SVLLLMVGFSA Trigger: AGCAGAAAACCCCACCATTAACAAGAGGACACTGCAGAGGCTTATGTACAACACGTGTCCCGCGAGGCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000421213.1 |
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| CDS GCA 72 bp | TCTGCTCCAAAGAAATTTTGGAGTGAGTGGCAGTCCTaGGCCAGCCTCGCGGGACACGTGTTGTACATAAGC | + |
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Preference number: 6 (lower is better) Translates to: SAPKKFWSEWQS*ASLAGHVLYIS Trigger: GCTTATGTACAACACGTGTCCCGCGAGGCTGGCGCAGGACTGCCACTCACTCCAAAATTTCTTTGGAGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421213.1 |
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| CDS CAA 72 bp | ACCTGCAGCTTCCATACCAGTGAGGAAATCAGACCTTaGCTGATGATCTCTTGGGCCCCTCTAGGCACCTGG | + |
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Preference number: 6 (lower is better) Translates to: TCSFHTSEEIRP*LMISWAPLGTW Trigger: CCAGGTGCCTAGAGGGGCCCAAGAGATCATCAGCAAAGGTCTGATTTCCTCACTGGTATGGAAGCTGCAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216036.9 |
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| CDS CAA 90 bp | GCCGTGATGTGGAGCACCTCGGTGGTCTTTATGCGCACCATACTGTaGCTATCCTTCAGCAAAGCTTTCAGGTTCTCCATACAGCCTATG | + |
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Preference number: 6 (lower is better) Translates to: AVMWSTSVVFMRTIL*LSFSKAFRFSIQPM Trigger: CATAGGCTGTATGGAGAACCTGAAAGCTTTGCTGAAGGATAGCAACAGTATGGTGCGCATAAAGACCACCGAGGTGCTCCACATCACGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000216036.9 ENST00000406876.1 ENST00000452757.5 |
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| CDS TCA 72 bp | GGGCCATCTTTCCCCAACTACAGAGGCCTTTCCAAATaGAGCTCTGCAGAAACCACTCACGTGAGCTCTAGA | + |
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Preference number: 6 (lower is better) Translates to: GPSFPNYRGLSK*SSAETTHVSSR Trigger: TCTAGAGCTCACGTGAGTGGTTTCTGCAGAGCTTCATTTGGAAAGGCCTCTGTAGTTGGGGAAAGATGGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000406876.1 |
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| CDS CAA 72 bp | GGACACGTGTTGTACATAAGCCTCTGCAGTGTCCTCTaGTTAATGGTGGGGTTTTCTGCTCTAGGCACCTGG | + |
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Preference number: 6 (lower is better) Translates to: GHVLYISLCSVL*LMVGFSALGTW Trigger: CCAGGTGCCTAGAGCAGAAAACCCCACCATTAACAAGAGGACACTGCAGAGGCTTATGTACAACACGTGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000421213.1 |
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| CDS TCA 72 bp | TTCAGCAGATGGACCAGGATGGGGATGACGTCAAAATaGCACACCTGTTTCTTGCCCTCTCGAGATATGCTG | + |
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Preference number: 6 (lower is better) Translates to: FSRWTRMGMTSK*HTCFLPSRDML Trigger: CAGCATATCTCGAGAGGGCAAGAAACAGGTGTGTCATTTTGACGTCATCCCCATCCTGGTCCATCTGCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216036.9 |
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| CDS GCA 72 bp | GGAGCACCTCGGTGGTCTTTATGCGCACCATACTGTTaGTATCCTTCAGCAAAGCTTTCAGGTTCTCCATAC | + |
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Preference number: 6 (lower is better) Translates to: GAPRWSLCAPYC*YPSAKLSGSPY Trigger: GTATGGAGAACCTGAAAGCTTTGCTGAAGGATAGCAACAGTATGGTGCGCATAAAGACCACCGAGGTGCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000216036.9 ENST00000406876.1 ENST00000452757.5 |
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| CDS CCA 72 bp | TTTGTGTCTGGCTTGCTGAGTGTAAAAGTTGTTATCTaGACGATCTGTCTCTCTGCTCCAAAGAAATTTTGG | + |
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Preference number: 6 (lower is better) Translates to: FVSGLLSVKVVI*TICLSAPKKFW Trigger: CCAAAATTTCTTTGGAGCAGAGAGACAGATCGTCCAGATAACAACTTTTACACTCAGCAAGCCAGACACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000421213.1 |
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