Pregenerated sensors for RSL1D1-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000263307Ensembl transcript IDs: ENST00000574364.1
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CAACGGGCAGGTGGGCAGTGGAGCCAGGATTCCGCGCTCTGCCCATaGCACGCGCGGCCTTCCCGGAGGCGGGGACCGTGGAGTGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QRAGGQWSQDSALCP*HARPSRRRGPWSVE Trigger: CTCCACACTCCACGGTCCCCGCCTCCGGGAAGGCCGCGCGTGGCATGGGCAGAGCGCGGAATCCTGGCTCCACTGCCCACCTGCCCGTTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574364.1 |
||
| CDS CCA 90 bp | TCCTCACCAGCCTGGGGTTGGCGTCGCCTAAAGTCAACGGGCAGGTaGGCAGTGGAGCCAGGATTCCGCGCTCTGCCCATGCCACGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: SSPAWGWRRLKSTGR*AVEPGFRALPMPRA Trigger: CGCGCGTGGCATGGGCAGAGCGCGGAATCCTGGCTCCACTGCCCACCTGCCCGTTGACTTTAGGCGACGCCAACCCCAGGCTGGTGAGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574364.1 |
||
| CDS CCA 90 bp | CCGGGTGGCTCCCGTGCCTTATATTTCAGGGACTCCTCACCAGCCTaGGGTTGGCGTCGCCTAAAGTCAACGGGCAGGTGGGCAGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PGGSRALYFRDSSPA*GWRRLKSTGRWAVE Trigger: CTCCACTGCCCACCTGCCCGTTGACTTTAGGCGACGCCAACCCCAGGCTGGTGAGGAGTCCCTGAAATATAAGGCACGGGAGCCACCCGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574364.1 |
||
| CDS CCA 90 bp | GGCTCCCGTGCCTTATATTTCAGGGACTCCTCACCAGCCTGGGGTTaGCGTCGCCTAAAGTCAACGGGCAGGTGGGCAGTGGAGCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GSRALYFRDSSPAWG*RRLKSTGRWAVEPG Trigger: TCCTGGCTCCACTGCCCACCTGCCCGTTGACTTTAGGCGACGCCAACCCCAGGCTGGTGAGGAGTCCCTGAAATATAAGGCACGGGAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574364.1 |
||
| CDS CCA 90 bp | GACTCATCTTTCGGTCCCTCATGCTGCTTAACGTGGCAGGTCGGGTaGCTCCGGGTGGCTCCCGTGCCTTATATTTCAGGGACTCCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: DSSFGPSCCLTWQVG*LRVAPVPYISGTPH Trigger: GTGAGGAGTCCCTGAAATATAAGGCACGGGAGCCACCCGGAGCCACCCGACCTGCCACGTTAAGCAGCATGAGGGACCGAAAGATGAGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574364.1 |
||
| CDS CCA 90 bp | GAGACTGGCCCAGACTCATCTTTCGGTCCCTCATGCTGCTTAACGTaGCAGGTCGGGTGGCTCCGGGTGGCTCCCGTGCCTTATATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ETGPDSSFGPSCCLT*QVGWLRVAPVPYIS Trigger: TGAAATATAAGGCACGGGAGCCACCCGGAGCCACCCGACCTGCCACGTTAAGCAGCATGAGGGACCGAAAGATGAGTCTGGGCCAGTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574364.1 |
||
| CDS TCA 90 bp | CTGGGCCTCCTGACGGGACTCTTCTCTCGCCTCAAGGCGCTTTCTTaGTTTCTATCTAGTAAGAGTGAGAGGACACCCAAGCTACTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LGLLTGLFSRLKALS*FLSSKSERTPKLLP Trigger: GGGGAGTAGCTTGGGTGTCCTCTCACTCTTACTAGATAGAAATCAAGAAAGCGCCTTGAGGCGAGAGAAGAGTCCCGTCAGGAGGCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574364.1 |
||
| CDS CCA 90 bp | CTAGTTCACAGTTCTTCAGCTGCTTTTGCTCTTGGAAACTTCTCTTaGGGAATTTATAGTCTGTTGCCGCTGTGCTTTCGGAGTAATCTC | + |
|
Preference number: 5 (lower is better) Translates to: LVHSSSAAFALGNFS*GIYSLLPLCFRSNL Trigger: GAGATTACTCCGAAAGCACAGCGGCAACAGACTATAAATTCCCCAAGAGAAGTTTCCAAGAGCAAAAGCAGCTGAAGAACTGTGAACTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574364.1 |
||
| CDS GCA 72 bp | GGTGGGCAGTGGAGCCAGGATTCCGCGCTCTGCCCATaGCACGCGCGGCCTTCCCGGAGGCGGGGACCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: GGQWSQDSALCP*HARPSRRRGPW Trigger: CCACGGTCCCCGCCTCCGGGAAGGCCGCGCGTGGCATGGGCAGAGCGCGGAATCCTGGCTCCACTGCCCACC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574364.1 |
||
| CDS GCA 72 bp | CGGGCAGGTGGGCAGTGGAGCCAGGATTCCGCGCTCTaGCCATGCCACGCGCGGCCTTCCCGGAGGCGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: RAGGQWSQDSAL*PCHARPSRRRG Trigger: TCCCCGCCTCCGGGAAGGCCGCGCGTGGCATGGGCAGAGCGCGGAATCCTGGCTCCACTGCCCACCTGCCCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574364.1 |
||
| CDS CCA 72 bp | GCCTGGGGTTGGCGTCGCCTAAAGTCAACGGGCAGGTaGGCAGTGGAGCCAGGATTCCGCGCTCTGCCCATG | + |
|
Preference number: 6 (lower is better) Translates to: AWGWRRLKSTGR*AVEPGFRALPM Trigger: CATGGGCAGAGCGCGGAATCCTGGCTCCACTGCCCACCTGCCCGTTGACTTTAGGCGACGCCAACCCCAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574364.1 |
||
| CDS TCA 72 bp | GGGACCGTGGAGTGTGGAGGACCCCACTGGGCCTCCTaGCGGGACTCTTCTCTCGCCTCAAGGCGCTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: GTVECGGPHWAS*RDSSLASRRFL Trigger: AAGAAAGCGCCTTGAGGCGAGAGAAGAGTCCCGTCAGGAGGCCCAGTGGGGTCCTCCACACTCCACGGTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574364.1 |
||
| CDS CCA 72 bp | CCAGACTCATCTTTCGGTCCCTCATGCTGCTTAACGTaGCAGGTCGGGTGGCTCCGGGTGGCTCCCGTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: PDSSFGPSCCLT*QVGWLRVAPVP Trigger: AGGCACGGGAGCCACCCGGAGCCACCCGACCTGCCACGTTAAGCAGCATGAGGGACCGAAAGATGAGTCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574364.1 |
||
| CDS CAA 90 bp | TGGCTCCCGTGCCTTATATTTCAGGGACTCCTCACCAGCCTGGGGTaGGCGTCGCCTAAAGTCAACGGGCAGGTGGGCAGTGGAGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: WLPCLIFQGLLTSLG*ASPKVNGQVGSGAR Trigger: CCTGGCTCCACTGCCCACCTGCCCGTTGACTTTAGGCGACGCCAACCCCAGGCTGGTGAGGAGTCCCTGAAATATAAGGCACGGGAGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574364.1 |
||
| CDS GCA 72 bp | GAGACTGGCCCAGACTCATCTTTCGGTCCCTCATGCTaGTTAACGTGGCAGGTCGGGTGGCTCCGGGTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: ETGPDSSFGPSC*LTWQVGWLRVA Trigger: AGCCACCCGGAGCCACCCGACCTGCCACGTTAAGCAGCATGAGGGACCGAAAGATGAGTCTGGGCCAGTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574364.1 |
||
| CDS CCA 72 bp | GCCTTATATTTCAGGGACTCCTCACCAGCCTGGGGTTaGCGTCGCCTAAAGTCAACGGGCAGGTGGGCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: ALYFRDSSPAWG*RRLKSTGRWAV Trigger: CACTGCCCACCTGCCCGTTGACTTTAGGCGACGCCAACCCCAGGCTGGTGAGGAGTCCCTGAAATATAAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574364.1 |
||
| CDS CCA 72 bp | TCCCGTGCCTTATATTTCAGGGACTCCTCACCAGCCTaGGGTTGGCGTCGCCTAAAGTCAACGGGCAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SRALYFRDSSPA*GWRRLKSTGRW Trigger: CCACCTGCCCGTTGACTTTAGGCGACGCCAACCCCAGGCTGGTGAGGAGTCCCTGAAATATAAGGCACGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574364.1 |
||
| CDS CCA 72 bp | CCCGCCTCTCTGCGAGACCAGAAGCTCCTAAGAGACTaGCCCAGACTCATCTTTCGGTCCCTCATGCTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: PASLRDQKLLRD*PRLIFRSLMLL Trigger: AAGCAGCATGAGGGACCGAAAGATGAGTCTGGGCCAGTCTCTTAGGAGCTTCTGGTCTCGCAGAGAGGCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574364.1 |
||
| CDS CAA 72 bp | TGCCTTATATTTCAGGGACTCCTCACCAGCCTGGGGTaGGCGTCGCCTAAAGTCAACGGGCAGGTGGGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: CLIFQGLLTSLG*ASPKVNGQVGS Trigger: ACTGCCCACCTGCCCGTTGACTTTAGGCGACGCCAACCCCAGGCTGGTGAGGAGTCCCTGAAATATAAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574364.1 |
||
| CDS GCA 72 bp | AACTTCTCTTGGGGAATTTATAGTCTGTTGCCGCTGTaGTTTCGGAGTAATCTCCCGCCTCTCTGCGAGACC | + |
|
Preference number: 6 (lower is better) Translates to: NFSWGIYSLLPL*FRSNLPPLCET Trigger: GGTCTCGCAGAGAGGCGGGAGATTACTCCGAAAGCACAGCGGCAACAGACTATAAATTCCCCAAGAGAAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574364.1 |
||
| CDS TCA 72 bp | CTGACGGGACTCTTCTCTCGCCTCAAGGCGCTTTCTTaGTTTCTATCTAGTAAGAGTGAGAGGACACCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: LTGLFSRLKALS*FLSSKSERTPK Trigger: CTTGGGTGTCCTCTCACTCTTACTAGATAGAAATCAAGAAAGCGCCTTGAGGCGAGAGAAGAGTCCCGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574364.1 |
||
| CDS CCA 72 bp | AGTTCTTCAGCTGCTTTTGCTCTTGGAAACTTCTCTTaGGGAATTTATAGTCTGTTGCCGCTGTGCTTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: SSSAAFALGNFS*GIYSLLPLCFR Trigger: CCGAAAGCACAGCGGCAACAGACTATAAATTCCCCAAGAGAAGTTTCCAAGAGCAAAAGCAGCTGAAGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574364.1 |
||