RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RSF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000048649

Ensembl transcript IDs: ENST00000308488.10, ENST00000308488.11, ENST00000440064.2, ENST00000467567.1, ENST00000480887.5, ENST00000526324.5, ENST00000528095.5, ENST00000529470.1, ENST00000530604.1, ENST00000531026.5, ENST00000531768.1, ENST00000532556.1, ENST00000534794.1

Found 289 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGGGCACATGGGAGAGTTTCCACACAATAGTGGCTTTACCCAGCTaGAGGACTAAAACGGTAGTGAGACTGGGTGGCAGGAAAGGGCAC +
Preference number: 1 (lower is better)
Translates to: QGTWESFHTIVALPS*RTKTVVRLGGRKGH
Trigger: GTGCCCTTTCCTGCCACCCAGTCTCACTACCGTTTTAGTCCTGCAGCTGGGTAAAGCCACTATTGTGTGGAAACTCTCCCATGTGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR TCA 90 bp GACAGGGCTTGTTACTCTAATTTCAAGGCTTGTCCACATAGCAGTTaGCATGCACCAATTCTGCTAAAGGGCAGGAGAATGAAAAAGACA +
Preference number: 1 (lower is better)
Translates to: DRACYSNFKACPHSS*HAPILLKGRRMKKT
Trigger: TGTCTTTTTCATTCTCCTGCCCTTTAGCAGAATTGGTGCATGTCAACTGCTATGTGGACAAGCCTTGAAATTAGAGTAACAAGCCCTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR GCA 90 bp AGAGGGCTAGGTAGATTACAGCAGATATGCAGCCTTGGCATTCTCTaGTTCTTCGAGAATGAGGAATATATTTTGAGAATGTCAAACATC +
Preference number: 1 (lower is better)
Translates to: RGLGRLQQICSLGIL*FFENEEYILRMSNI
Trigger: GATGTTTGACATTCTCAAAATATATTCCTCATTCTCGAAGAAGCAGAGAATGCCAAGGCTGCATATCTGCTGTAATCTACCTAGCCCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR GCA 90 bp TGGATCATATTAAGCAGAAGAGGGCTAGGTAGATTACAGCAGATATaGAGCCTTGGCATTCTCTGCTTCTTCGAGAATGAGGAATATATT +
Preference number: 1 (lower is better)
Translates to: WIILSRRGLGRLQQI*SLGILCFFENEEYI
Trigger: AATATATTCCTCATTCTCGAAGAAGCAGAGAATGCCAAGGCTGCATATCTGCTGTAATCTACCTAGCCCTCTTCTGCTTAATATGATCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR TCA 90 bp CAGGTTTGGGCAAGCTACAACAGATACCATCTCAAGAAGCTACTTTaGAAGAGAATAGAACACCAGACTAACATTGAGAATACCCTAGTT +
Preference number: 1 (lower is better)
Translates to: QVWASYNRYHLKKLL*KRIEHQTNIENTLV
Trigger: AACTAGGGTATTCTCAATGTTAGTCTGGTGTTCTATTCTCTTTCAAAGTAGCTTCTTGAGATGGTATCTGTTGTAGCTTGCCCAAACCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR TCA 90 bp ATTACAGCAGATATGCAGCCTTGGCATTCTCTGCTTCTTCGAGAATaGGGAATATATTTTGAGAATGTCAAACATCAGGAGAAACTGTTG +
Preference number: 1 (lower is better)
Translates to: ITADMQPWHSLLLRE*GIYFENVKHQEKLL
Trigger: CAACAGTTTCTCCTGATGTTTGACATTCTCAAAATATATTCCTCATTCTCGAAGAAGCAGAGAATGCCAAGGCTGCATATCTGCTGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR TCA 90 bp AAATTGGATCCTCTTCTAATCGACTTCCAGGAGGGTTTGCATGAATaGATACAAAAAGTGGTGAGTGTATACTCTAAAGTGGTTATATAC +
Preference number: 1 (lower is better)
Translates to: KLDPLLIDFQEGLHE*IQKVVSVYSKVVIY
Trigger: GTATATAACCACTTTAGAGTATACACTCACCACTTTTTGTATTCATTCATGCAAACCCTCCTGGAAGTCGATTAGAAGAGGATCCAATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR CCA 90 bp ATATACTTAGGATTAACAATTCCATTCTTAACTTACATCATCCAGTaGCAAAAAGCACGAGGCAAGTATTCAGTCCTTAGCACACTTTCT +
Preference number: 1 (lower is better)
Translates to: IYLGLTIPFLTYIIQ*QKARGKYSVLSTLS
Trigger: AGAAAGTGTGCTAAGGACTGAATACTTGCCTCGTGCTTTTTGCCACTGGATGATGTAAGTTAAGAATGGAATTGTTAATCCTAAGTATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR GCA 90 bp AAAGGGCTTTTCTTTAAAGTGTTGAGATGTTTGAAATGGATGTCATaGCTATTAATTACATCGGCAGTTCTCATTCAACTCTATGTTGGT +
Preference number: 1 (lower is better)
Translates to: KGLFFKVLRCLKWMS*LLITSAVLIQLYVG
Trigger: ACCAACATAGAGTTGAATGAGAACTGCCGATGTAATTAATAGGCATGACATCCATTTCAAACATCTCAACACTTTAAAGAAAAGCCCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR-3UTR TCA 90 bp AAGTGCTTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGACTGGCCCGCTGGTGTaGGAGCTACCGTGGAATAAA +
Preference number: 2 (lower is better)
Translates to: KCFHPPLNSVLGPHRFGMTGPLV*ELPWNK
Trigger: TTTATTCCACGGTAGCTCTCACACCAGCGGGCCAGT...CATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308488.10
ENST00000480887.5
3UTR CAA 90 bp AAATTAATGACGTTCCTTGGGCCAGCAGCAGATATGGTGTGTCCATaGCCGGCAACAGACACAACACCGGAACAGAAAAACCCAAATCCC +
Preference number: 2 (lower is better)
Translates to: KLMTFLGPAADMVCP*PATDTTPEQKNPNP
Trigger: GGGATTTGGGTTTTTCTGTTCCGGTGTTGTGTCTGTTGCCGGCAATGGACACACCATATCTGCTGCTGGCCCAAGGAACGTCATTAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR-3UTR GCA 90 bp AATGACGTTCCTTGGGCCAGCAGCAGATATGGTGTGTCCATTGCCGGCAACAGACTCACAGATTCGGAATaGATTTTCATCCACCCTTTT +
Preference number: 2 (lower is better)
Translates to: NDVPWASSRYGVSIAGNRLTDSE*IFIHPF
Trigger: AAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAG...TCTGTTGCCGGCAATGGACACACCATATCTGCTGCTGGCCCAAGGAACGTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR-3UTR TCA 90 bp AAGCATGTTGGAAAATTCAAGAGGCATTCTGATCAGTCCCTGAATTCCAGCTATACTGGCCCGCTGGTGTaGGAGCTACCGTGGAATAAA +
Preference number: 2 (lower is better)
Translates to: KHVGKFKRHSDQSLNSSYTGPLV*ELPWNK
Trigger: TTTATTCCACGGTAGCTCTCACACCAGCGGGCCAGT...ATAGCTGGAATTCAGGGACTGATCAGAATGCCTCTTGAATTTTCCAACATGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR-3UTR CCA 90 bp CTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGAGAGCACAGCTTTTAATAACTaGCCCGCTGGTGTGAGAGCT +
Preference number: 2 (lower is better)
Translates to: LTDSECIFIHPFSQSQESTAFNN*PAGVRA
Trigger: AGCTCTCACACCAGCGGGCCAGTTATTAAAAGCTGT...GCTCTCCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308488.10
ENST00000480887.5
3UTR-3UTR CCA 90 bp AAGCATGTTGGAAAATTCAAGAGGCATTCTGATCAGTCCCTGAATTCCAGCTATGTACACACAACCTCATaGCAGGTTTGGGCAAGCTAC +
Preference number: 2 (lower is better)
Translates to: KHVGKFKRHSDQSLNSSYVHTTS*QVWASY
Trigger: GTAGCTTGCCCAAACCTGCCATGAGGTTGTGTGTAC...ATAGCTGGAATTCAGGGACTGATCAGAATGCCTCTTGAATTTTCCAACATGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR-3UTR TCA 90 bp AAGTGCTTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGAATTACCAAGGACCATaGACCTGGAAAAAGAAAATC +
Preference number: 2 (lower is better)
Translates to: KCFHPPLNSVLGPHRFGMNYQGP*TWKKKI
Trigger: GATTTTCTTTTTCCAGGTTCATGGTCCTTGGTAATT...CATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000308488.10
ENST00000480887.5
3UTR-3UTR TCA 90 bp AAGCATGTTGGAAAATTCAAGAGGCATTCTGATCAGTCCCTGAATTCCAGCTATAAAAAGCATTCCTTGTaGCAAAGGACACCCCACCAG +
Preference number: 2 (lower is better)
Translates to: KHVGKFKRHSDQSLNSSYKKHSL*QRTPHQ
Trigger: CTGGTGGGGTGTCCTTTGTCACAAGGAATGCTTTTT...ATAGCTGGAATTCAGGGACTGATCAGAATGCCTCTTGAATTTTCCAACATGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR-3UTR TCA 90 bp CACACATGCAGTACATTATGTGACAGAGAGCACTCCAGCTTCTATTTGACTAACATTCAAGAGGCATTCTaGTCAGTCCCTGAATTCCAG +
Preference number: 2 (lower is better)
Translates to: HTCSTLCDREHSSFYLTNIQEAF*SVPEFQ
Trigger: CTGGAATTCAGGGACTGATCAGAATGCCTCTTGAAT...GTTAGTCAAATAGAAGCTGGAGTGCTCTCTGTCACATAATGTACTGCATGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR-3UTR GCA 90 bp CACACATGCAGTACATTATGTGACAGAGAGCACTCCAGCTTCTATTTGACTAACAGCCTTGGCATTCTCTaGTTCTTCGAGAATGAGGAA +
Preference number: 2 (lower is better)
Translates to: HTCSTLCDREHSSFYLTNSLGIL*FFENEE
Trigger: TTCCTCATTCTCGAAGAAGCAGAGAATGCCAAGGCT...GTTAGTCAAATAGAAGCTGGAGTGCTCTCTGTCACATAATGTACTGCATGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR-3UTR CCA 90 bp AAGCATGTTGGAAAATTCAAGAGGCATTCTGATCAGTCCCTGAATTCCAGCTATACAGCTTTTAATAACTaGCCCGCTGGTGTGAGAGCT +
Preference number: 2 (lower is better)
Translates to: KHVGKFKRHSDQSLNSSYTAFNN*PAGVRA
Trigger: AGCTCTCACACCAGCGGGCCAGTTATTAAAAGCTGT...ATAGCTGGAATTCAGGGACTGATCAGAATGCCTCTTGAATTTTCCAACATGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR-3UTR CCA 90 bp GGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGTTCAAAGTTCAGAACTaGTCACTTCACAGAAAGACT +
Preference number: 2 (lower is better)
Translates to: GPSQIRNAFSSTLFHKVRFKVQN*SLHRKT
Trigger: AGTCTTTCTGTGAAGTGACCAGTTCTGAACTTTGAA...CCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308488.10
ENST00000480887.5
3UTR CAA 90 bp TGCAGGACTAAAACGGTAGTGAGACTGGGTGGCAGGAAAGGGCACTaGTATATTCAAACCACTTACCTTGCACTAGTAGAAATCTTTATA +
Preference number: 2 (lower is better)
Translates to: CRTKTVVRLGGRKGH*YIQTTYLALVEIFI
Trigger: TATAAAGATTTCTACTAGTGCAAGGTAAGTGGTTTGAATATACAAGTGCCCTTTCCTGCCACCCAGTCTCACTACCGTTTTAGTCCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR-3UTR GCA 90 bp AGAGTGTATTTCAGTGATCATAAACTCTTTGAGGGACTGAATCTGAACTCCAAGATATGGTGTGTCCATTaGCGGCAACAGACACAACAC +
Preference number: 2 (lower is better)
Translates to: RVYFSDHKLFEGLNLNSKIWCVH*RQQTQH
Trigger: GTGTTGTGTCTGTTGCCGGCAATGGACACACCATAT...CTTGGAGTTCAGATTCAGTCCCTCAAAGAGTTTATGATCACTGAAATACACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR-3UTR CCA 90 bp TGCAGTGACCTTAAAGCTTTGGAGACAGGGCTTGTTACTCTAATTTCAAGGCTTGTTGCTAGCACAGTCTaGTTGGCAAAGCTTCATTAT +
Preference number: 2 (lower is better)
Translates to: CSDLKALETGLVTLISRLVASTV*LAKLHY
Trigger: ATAATGAAGCTTTGCCAACCAGACTGTGCTAGCAAC...AAGCCTTGAAATTAGAGTAACAAGCCCTGTCTCCAAAGCTTTAAGGTCACTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR CAA 90 bp CACACATGCAGTACATTATGTGACAGAGAGCACTCCAGCTTCTATTaGACTAACAGCATGGTCCTGATTACCTCAAGAGTTAGTTTTATG +
Preference number: 2 (lower is better)
Translates to: HTCSTLCDREHSSFY*TNSMVLITSRVSFM
Trigger: CATAAAACTAACTCTTGAGGTAATCAGGACCATGCTGTTAGTCAAATAGAAGCTGGAGTGCTCTCTGTCACATAATGTACTGCATGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR-3UTR TCA 90 bp TCATGCAGTGACCTTAAAGCTTTGGAGACAGGGCTTGTTACTCTAATTTCAAGGGAGGGTTTGCATGAATaGATACAAAAAGTGGTGAGT +
Preference number: 2 (lower is better)
Translates to: SCSDLKALETGLVTLISREGLHE*IQKVVS
Trigger: ACTCACCACTTTTTGTATTCATTCATGCAAACCCTC...CCTTGAAATTAGAGTAACAAGCCCTGTCTCCAAAGCTTTAAGGTCACTGCATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR-3UTR GCA 90 bp AGCTTTAAGCTACCAAGAATTCCCATACTTTTAATGCACAATTTACTTTGCGTGGTGGCTTTACCCAGCTaGAGGACTAAAACGGTAGTG +
Preference number: 2 (lower is better)
Translates to: SFKLPRIPILLMHNLLCVVALPS*RTKTVV
Trigger: CACTACCGTTTTAGTCCTGCAGCTGGGTAAAGCCAC...CACGCAAAGTAAATTGTGCATTAAAAGTATGGGAATTCTTGGTAGCTTAAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR-3UTR CCA 90 bp TTGGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCATTCAAAGTTCAGAACTaGTCACTTCACAGAAAGACT +
Preference number: 2 (lower is better)
Translates to: LGPHRFGMHFHPPFFTKSFKVQN*SLHRKT
Trigger: AGTCTTTCTGTGAAGTGACCAGTTCTGAACTTTGAA...TGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308488.10
ENST00000480887.5
3UTR-3UTR CCA 90 bp AGAGTGTATTTCAGTGATCATAAACTCTTTGAGGGACTGAATCTGAACTCCAAGATTAATGACGTTCCTTaGGCCAGCAGCAGATATGGT +
Preference number: 2 (lower is better)
Translates to: RVYFSDHKLFEGLNLNSKINDVP*ASSRYG
Trigger: ACCATATCTGCTGCTGGCCCAAGGAACGTCATTAAT...CTTGGAGTTCAGATTCAGTCCCTCAAAGAGTTTATGATCACTGAAATACACTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR-3UTR TCA 90 bp CACACATGCAGTACATTATGTGACAGAGAGCACTCCAGCTTCTATTTGACTAACCAGTTAAAATTCACCTaGAAATCTCTTCCCAGTCTT +
Preference number: 2 (lower is better)
Translates to: HTCSTLCDREHSSFYLTNQLKFT*KSLPSL
Trigger: AAGACTGGGAAGAGATTTTCAGGTGAATTTTAACTG...GTTAGTCAAATAGAAGCTGGAGTGCTCTCTGTCACATAATGTACTGCATGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR-3UTR TCA 90 bp TCATGCAGTGACCTTAAAGCTTTGGAGACAGGGCTTGTTACTCTAATTTCAAGGGGAATACTCAGTCTTTaGGATGGTAAGAATTACCTT +
Preference number: 2 (lower is better)
Translates to: SCSDLKALETGLVTLISRGILSL*DGKNYL
Trigger: AAGGTAATTCTTACCATCTCAAAGACTGAGTATTCC...CCTTGAAATTAGAGTAACAAGCCCTGTCTCCAAAGCTTTAAGGTCACTGCATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR-3UTR TCA 90 bp CACACATGCAGTACATTATGTGACAGAGAGCACTCCAGCTTCTATTTGACTAACTTACATTTTGGCTTATaGCTGCTTGCTTGGCAATTA +
Preference number: 2 (lower is better)
Translates to: HTCSTLCDREHSSFYLTNLHFGL*LLAWQL
Trigger: TAATTGCCAAGCAAGCAGTCATAAGCCAAAATGTAA...GTTAGTCAAATAGAAGCTGGAGTGCTCTCTGTCACATAATGTACTGCATGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR-3UTR TCA 90 bp TGCAGTGACCTTAAAGCTTTGGAGACAGGGCTTGTTACTCTAATTTCAAGGCTTGAATACAAAAAGTGGTaGGTGTATACTCTAAAGTGG +
Preference number: 2 (lower is better)
Translates to: CSDLKALETGLVTLISRLEYKKW*VYTLKW
Trigger: CCACTTTAGAGTATACACTCACCACTTTTTGTATTC...AAGCCTTGAAATTAGAGTAACAAGCCCTGTCTCCAAAGCTTTAAGGTCACTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR-3UTR GCA 90 bp TGCAGTGACCTTAAAGCTTTGGAGACAGGGCTTGTTACTCTAATTTCAAGGCTTTTACTTGGAACCACATaGTATTGGTGCATCCTATTT +
Preference number: 2 (lower is better)
Translates to: CSDLKALETGLVTLISRLLLGTT*YWCILF
Trigger: AAATAGGATGCACCAATAGCATGTGGTTCCAAGTAA...AAGCCTTGAAATTAGAGTAACAAGCCCTGTCTCCAAAGCTTTAAGGTCACTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR-3UTR TCA 90 bp AAGCATGTTGGAAAATTCAAGAGGCATTCTGATCAGTCCCTGAATTCCAGCTATAATTACCAAGGACCATaGACCTGGAAAAAGAAAATC +
Preference number: 2 (lower is better)
Translates to: KHVGKFKRHSDQSLNSSYNYQGP*TWKKKI
Trigger: GATTTTCTTTTTCCAGGTTCATGGTCCTTGGTAATT...ATAGCTGGAATTCAGGGACTGATCAGAATGCCTCTTGAATTTTCCAACATGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR-3UTR GCA 90 bp CACACATGCAGTACATTATGTGACAGAGAGCACTCCAGCTTCTATTTGACTAACAAAAATCAGTTAACTTaGCACTTCCAAGGTAGGTTT +
Preference number: 2 (lower is better)
Translates to: HTCSTLCDREHSSFYLTNKNQLT*HFQGRF
Trigger: AAACCTACCTTGGAAGTGGCAAGTTAACTGATTTTT...GTTAGTCAAATAGAAGCTGGAGTGCTCTCTGTCACATAATGTACTGCATGTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR-3UTR CCA 90 bp AAGCATGTTGGAAAATTCAAGAGGCATTCTGATCAGTCCCTGAATTCCAGCTATAAATCACAACTTACTTaGAACCACATGCTATTGGTG +
Preference number: 2 (lower is better)
Translates to: KHVGKFKRHSDQSLNSSYKSQLT*NHMLLV
Trigger: CACCAATAGCATGTGGTTCCAAGTAAGTTGTGATTT...ATAGCTGGAATTCAGGGACTGATCAGAATGCCTCTTGAATTTTCCAACATGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR-3UTR CCA 90 bp TGCAGTGACCTTAAAGCTTTGGAGACAGGGCTTGTTACTCTAATTTCAAGGCTTCTAAAAAGTAAAAACTaGGTACGTGTAACACCCTTT +
Preference number: 2 (lower is better)
Translates to: CSDLKALETGLVTLISRLLKSKN*VRVTPF
Trigger: AAAGGGTGTTACACGTACCCAGTTTTTACTTTTTAG...AAGCCTTGAAATTAGAGTAACAAGCCCTGTCTCCAAAGCTTTAAGGTCACTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR-3UTR GCA 90 bp AAGCATGTTGGAAAATTCAAGAGGCATTCTGATCAGTCCCTGAATTCCAGCTATTTGTATCTGTTGCAATaGAGCCATCTTATTTCTTTC +
Preference number: 2 (lower is better)
Translates to: KHVGKFKRHSDQSLNSSYLYLLQ*SHLISF
Trigger: GAAAGAAATAAGATGGCTGCATTGCAACAGATACAA...ATAGCTGGAATTCAGGGACTGATCAGAATGCCTCTTGAATTTTCCAACATGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR-3UTR GCA 90 bp AGAGTGTATTTCAGTGATCATAAACTCTTTGAGGGACTGAATCTGAACTCCAAGTTGAAATGGATGTCATaGCTATTAATTACATCGGCA +
Preference number: 2 (lower is better)
Translates to: RVYFSDHKLFEGLNLNSKLKWMS*LLITSA
Trigger: TGCCGATGTAATTAATAGGCATGACATCCATTTCAA...CTTGGAGTTCAGATTCAGTCCCTCAAAGAGTTTATGATCACTGAAATACACTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR-3UTR GCA 90 bp AAATATAAGGTGAGAAGGGGTACATTCACTATCAAGTTGACGAACACTTATTCAACCACATGCTATTGGTaGATCCTATTTTTAGGTTGC +
Preference number: 2 (lower is better)
Translates to: KYKVRRGTFTIKLTNTYSTTCYW*ILFLGC
Trigger: GCAACCTAAAAATAGGATGCACCAATAGCATGTGGT...TGAATAAGTGTTCGTCAACTTGATAGTGAATGTACCCCTTCTCACCTTATATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR-3UTR GCA 90 bp AGCTTTAAGCTACCAAGAATTCCCATACTTTTAATGCACAATTTACTTTGCGTGATTAAAATCAAGCCCTaGTCTACCACCATCTTAGCA +
Preference number: 2 (lower is better)
Translates to: SFKLPRIPILLMHNLLCVIKIKP*STTILA
Trigger: TGCTAAGATGGTGGTAGAGCAGGGCTTGATTTTAAT...CACGCAAAGTAAATTGTGCATTAAAAGTATGGGAATTCTTGGTAGCTTAAAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR-3UTR GCA 90 bp AGCTTTAAGCTACCAAGAATTCCCATACTTTTAATGCACAATTTACTTTGCGTGCAAGAGTTAGTTTTATaGCAATCTTGGAGCTTCTGC +
Preference number: 2 (lower is better)
Translates to: SFKLPRIPILLMHNLLCVQELVL*QSWSFC
Trigger: GCAGAAGCTCCAAGATTGGCATAAAACTAACTCTTG...CACGCAAAGTAAATTGTGCATTAAAAGTATGGGAATTCTTGGTAGCTTAAAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR-3UTR GCA 90 bp AGCTTTAAGCTACCAAGAATTCCCATACTTTTAATGCACAATTTACTTTGCGTGATTTTGGCTTATGACTaGTTGCTTGGCAATTACTCT +
Preference number: 2 (lower is better)
Translates to: SFKLPRIPILLMHNLLCVILAYD*LLGNYS
Trigger: AGAGTAATTGCCAAGCAAGCAGTCATAAGCCAAAAT...CACGCAAAGTAAATTGTGCATTAAAAGTATGGGAATTCTTGGTAGCTTAAAGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR-3UTR GCA 90 bp AAATATAAGGTGAGAAGGGGTACATTCACTATCAAGTTGACGAACACTTATTCAACAATGTTATGGCTCTaGCTGAAATTTTACAGCTAT +
Preference number: 2 (lower is better)
Translates to: KYKVRRGTFTIKLTNTYSTMLWL*LKFYSY
Trigger: ATAGCTGTAAAATTTCAGGCAGAGCCATAACATTGT...TGAATAAGTGTTCGTCAACTTGATAGTGAATGTACCCCTTCTCACCTTATATTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR GCA 72 bp CGTTCCTTGGGCCAGCAGCAGATATGGTGTGTCCATTaGCGGCAACAGACACAACACCGGAACAGAAAAACC +
Preference number: 3 (lower is better)
Translates to: RSLGQQQIWCVH*RQQTQHRNRKT
Trigger: GGTTTTTCTGTTCCGGTGTTGTGTCTGTTGCCGGCAATGGACACACCATATCTGCTGCTGGCCCAAGGAACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR-3UTR CAA 90 bp TCATGCAGTGACCTTAAAGCTTTGGAGACAGGGCTTGTTACTCTAATTTCAAGGGATATGGTGTGTCCATaGCCGGCAACAGACACAACA +
Preference number: 3 (lower is better)
Translates to: SCSDLKALETGLVTLISRDMVCP*PATDTT
Trigger: TGTTGTGTCTGTTGCCGGCAATGGACACACCATATC...CCTTGAAATTAGAGTAACAAGCCCTGTCTCCAAAGCTTTAAGGTCACTGCATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR GCA 72 bp TTAAGCAGAAGAGGGCTAGGTAGATTACAGCAGATATaGAGCCTTGGCATTCTCTGCTTCTTCGAGAATGAG +
Preference number: 3 (lower is better)
Translates to: LSRRGLGRLQQI*SLGILCFFENE
Trigger: CTCATTCTCGAAGAAGCAGAGAATGCCAAGGCTGCATATCTGCTGTAATCTACCTAGCCCTCTTCTGCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR CCA 72 bp CCCTTTCAAAGTGTACACACAACCTCATGGCAGGTTTaGGCAAGCTACAACAGATACCATCTCAAGAAGCTA +
Preference number: 3 (lower is better)
Translates to: PFQSVHTTSWQV*ASYNRYHLKKL
Trigger: TAGCTTCTTGAGATGGTATCTGTTGTAGCTTGCCCAAACCTGCCATGAGGTTGTGTGTACACTTTGAAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR GCA 72 bp ATGTGTGTGTGTGTGTGTGTGTGTGTGCAATTTTCATaGAGTGACCTTAAAGCTTTGGAGACAGGGCTTGTT +
Preference number: 3 (lower is better)
Translates to: MCVCVCVCVQFS*SDLKALETGLV
Trigger: AACAAGCCCTGTCTCCAAAGCTTTAAGGTCACTGCATGAAAATTGCACACACACACACACACACACACACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR-3UTR CAA 90 bp TCATGCAGTGACCTTAAAGCTTTGGAGACAGGGCTTGTTACTCTAATTTCAAGGGGCAGGAAAGGGCACTaGTATATTCAAACCACTTAC +
Preference number: 3 (lower is better)
Translates to: SCSDLKALETGLVTLISRGRKGH*YIQTTY
Trigger: GTAAGTGGTTTGAATATACAAGTGCCCTTTCCTGCC...CCTTGAAATTAGAGTAACAAGCCCTGTCTCCAAAGCTTTAAGGTCACTGCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR TCA 72 bp GCTGTTCATGAGCATGACGTGCAAGCTGCTGGTCTATaGCCAGAACTCAATAAATACAGATCAAACAAAACC +
Preference number: 3 (lower is better)
Translates to: AVHEHDVQAAGL*PELNKYRSNKT
Trigger: GGTTTTGTTTGATCTGTATTTATTGAGTTCTGGTCATAGACCAGCAGCTTGCACGTCATGCTCATGAACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR TCA 72 bp TGTTACTCTAATTTCAAGGCTTGTCCACATAGCAGTTaGCATGCACCAATTCTGCTAAAGGGCAGGAGAATG +
Preference number: 3 (lower is better)
Translates to: CYSNFKACPHSS*HAPILLKGRRM
Trigger: CATTCTCCTGCCCTTTAGCAGAATTGGTGCATGTCAACTGCTATGTGGACAAGCCTTGAAATTAGAGTAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR GCA 72 bp CCAATAACTATGTTCTGGCTGTTCATGAGCATGACGTaGAAGCTGCTGGTCTATGACCAGAACTCAATAAAT +
Preference number: 3 (lower is better)
Translates to: PITMFWLFMSMT*KLLVYDQNSIN
Trigger: ATTTATTGAGTTCTGGTCATAGACCAGCAGCTTGCACGTCATGCTCATGAACAGCCAGAACATAGTTATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR GCA 72 bp AGGAAGGAACTGAAACTTGAATTTGACTTCTCTTGCTaGCACGCTTCAGCAGACAACTATTCCTGTGGAATT +
Preference number: 3 (lower is better)
Translates to: RKELKLEFDFSC*HASADNYSCGI
Trigger: AATTCCACAGGAATAGTTGTCTGCTGAAGCGTGGCAGCAAGAGAAGTCAAATTCAAGTTTCAGTTCCTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR GCA 72 bp ATAAGGAAGGAACTGAAACTTGAATTTGACTTCTCTTaGTGCCACGCTTCAGCAGACAACTATTCCTGTGGA +
Preference number: 3 (lower is better)
Translates to: IRKELKLEFDFS*CHASADNYSCG
Trigger: TCCACAGGAATAGTTGTCTGCTGAAGCGTGGCAGCAAGAGAAGTCAAATTCAAGTTTCAGTTCCTTCCTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR-3UTR CAA 90 bp TGTTTGAAATGGATGTCATGCCTATTAATTACATCGGCAGTTCTCATTCAACTCCCCCTAAATTCTGTTTaGGGCCCTCACAGATTCGGA +
Preference number: 3 (lower is better)
Translates to: CLKWMSCLLITSAVLIQLPLNSV*GPHRFG
Trigger: TCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGG...GAGTTGAATGAGAACTGCCGATGTAATTAATAGGCATGACATCCATTTCAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR-3UTR CAA 90 bp TGCAGTGACCTTAAAGCTTTGGAGACAGGGCTTGTTACTCTAATTTCAAGGCTTAGCACACTTTCTAACTaGTACCGGTTTGGCCAAAAA +
Preference number: 3 (lower is better)
Translates to: CSDLKALETGLVTLISRLSTLSN*YRFGQK
Trigger: TTTTTGGCCAAACCGGTACAAGTTAGAAAGTGTGCT...AAGCCTTGAAATTAGAGTAACAAGCCCTGTCTCCAAAGCTTTAAGGTCACTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR-3UTR CAA 90 bp TCATGCAGTGACCTTAAAGCTTTGGAGACAGGGCTTGTTACTCTAATTTCAAGGATGATTCAGAAGGTTTaGAGCCATGAAGTTCCCCAA +
Preference number: 3 (lower is better)
Translates to: SCSDLKALETGLVTLISRMIQKV*SHEVPQ
Trigger: TTGGGGAACTTCATGGCTCAAAACCTTCTGAATCAT...CCTTGAAATTAGAGTAACAAGCCCTGTCTCCAAAGCTTTAAGGTCACTGCATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR-3UTR CAA 90 bp TCATGCAGTGACCTTAAAGCTTTGGAGACAGGGCTTGTTACTCTAATTTCAAGGCCCAAAGGAACTGCTTaGTTTGTAGACTTCAATTTG +
Preference number: 3 (lower is better)
Translates to: SCSDLKALETGLVTLISRPKGTA*FVDFNL
Trigger: CAAATTGAAGTCTACAAACAAAGCAGTTCCTTTGGG...CCTTGAAATTAGAGTAACAAGCCCTGTCTCCAAAGCTTTAAGGTCACTGCATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR-3UTR CAA 90 bp CACACATGCAGTACATTATGTGACAGAGAGCACTCCAGCTTCTATTTGACTAACAAAAAGGTCCACAAATaGGATCCTCTTCTAATCGAC +
Preference number: 3 (lower is better)
Translates to: HTCSTLCDREHSSFYLTNKKVHK*DPLLID
Trigger: GTCGATTAGAAGAGGATCCAATTTGTGGACCTTTTT...GTTAGTCAAATAGAAGCTGGAGTGCTCTCTGTCACATAATGTACTGCATGTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR-3UTR CAA 90 bp TCATGCAGTGACCTTAAAGCTTTGGAGACAGGGCTTGTTACTCTAATTTCAAGGAAAGTGTTGAGATGTTaGAAATGGATGTCATGCCTA +
Preference number: 3 (lower is better)
Translates to: SCSDLKALETGLVTLISRKVLRC*KWMSCL
Trigger: TAGGCATGACATCCATTTCAAACATCTCAACACTTT...CCTTGAAATTAGAGTAACAAGCCCTGTCTCCAAAGCTTTAAGGTCACTGCATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR-3UTR CAA 90 bp TCATGCAGTGACCTTAAAGCTTTGGAGACAGGGCTTGTTACTCTAATTTCAAGGAAAATCACAACTTACTaGGAACCACATGCTATTGGT +
Preference number: 3 (lower is better)
Translates to: SCSDLKALETGLVTLISRKITTY*EPHAIG
Trigger: ACCAATAGCATGTGGTTCCAAGTAAGTTGTGATTTT...CCTTGAAATTAGAGTAACAAGCCCTGTCTCCAAAGCTTTAAGGTCACTGCATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR-3UTR CAA 90 bp AGCTTTAAGCTACCAAGAATTCCCATACTTTTAATGCACAATTTACTTTGCGTGCACTCCAGCTTCTATTaGACTAACAGCATGGTCCTG +
Preference number: 3 (lower is better)
Translates to: SFKLPRIPILLMHNLLCVHSSFY*TNSMVL
Trigger: CAGGACCATGCTGTTAGTCAAATAGAAGCTGGAGTG...CACGCAAAGTAAATTGTGCATTAAAAGTATGGGAATTCTTGGTAGCTTAAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR TCA 72 bp CCTCTTCTAATCGACTTCCAGGAGGGTTTGCATGAATaGATACAAAAAGTGGTGAGTGTATACTCTAAAGTG +
Preference number: 3 (lower is better)
Translates to: PLLIDFQEGLHE*IQKVVSVYSKV
Trigger: CACTTTAGAGTATACACTCACCACTTTTTGTATTCATTCATGCAAACCCTCCTGGAAGTCGATTAGAAGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR CCA 72 bp GGATTAACAATTCCATTCTTAACTTACATCATCCAGTaGCAAAAAGCACGAGGCAAGTATTCAGTCCTTAGC +
Preference number: 3 (lower is better)
Translates to: GLTIPFLTYIIQ*QKARGKYSVLS
Trigger: GCTAAGGACTGAATACTTGCCTCGTGCTTTTTGCCACTGGATGATGTAAGTTAAGAATGGAATTGTTAATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR-3UTR CAA 90 bp AGCTTTAAGCTACCAAGAATTCCCATACTTTTAATGCACAATTTACTTTGCGTGAGTGACCTTAAAGCTTaGGAGACAGGGCTTGTTACT +
Preference number: 3 (lower is better)
Translates to: SFKLPRIPILLMHNLLCVSDLKA*ETGLVT
Trigger: AGTAACAAGCCCTGTCTCCAAAGCTTTAAGGTCACT...CACGCAAAGTAAATTGTGCATTAAAAGTATGGGAATTCTTGGTAGCTTAAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR TCA 72 bp TCCAGGAGGGTTTGCATGAATGAATACAAAAAGTGGTaGGTGTATACTCTAAAGTGGTTATATACTAAGCTC +
Preference number: 3 (lower is better)
Translates to: SRRVCMNEYKKW*VYTLKWLYTKL
Trigger: GAGCTTAGTATATAACCACTTTAGAGTATACACTCACCACTTTTTGTATTCATTCATGCAAACCCTCCTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR GCA 72 bp CAGGAAAGGGCACTTGTATATTCAAACCACTTACCTTaGACTAGTAGAAATCTTTATATTGCTTGCCTGTTT +
Preference number: 3 (lower is better)
Translates to: QERALVYSNHLP*TSRNLYIACLF
Trigger: AAACAGGCAAGCAATATAAAGATTTCTACTAGTGCAAGGTAAGTGGTTTGAATATACAAGTGCCCTTTCCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR GCA 72 bp AAAGATCCAAGACTGTCTAAACTCTACATCAATTACTaGTTTCCTATACTTTCTGCAGTTCGTAGTGACTGT +
Preference number: 3 (lower is better)
Translates to: KDPRLSKLYINY*FPILSAVRSDC
Trigger: ACAGTCACTACGAACTGCAGAAAGTATAGGAAAGCAGTAATTGATGTAGAGTTTAGACAGTCTTGGATCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR GCA 72 bp TTCTTTAAAGTGTTGAGATGTTTGAAATGGATGTCATaGCTATTAATTACATCGGCAGTTCTCATTCAACTC +
Preference number: 3 (lower is better)
Translates to: FFKVLRCLKWMS*LLITSAVLIQL
Trigger: GAGTTGAATGAGAACTGCCGATGTAATTAATAGGCATGACATCCATTTCAAACATCTCAACACTTTAAAGAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR CAA 72 bp ACGTTCCTTGGGCCAGCAGCAGATATGGTGTGTCCATaGCCGGCAACAGACACAACACCGGAACAGAAAAAC +
Preference number: 4 (lower is better)
Translates to: TFLGPAADMVCP*PATDTTPEQKN
Trigger: GTTTTTCTGTTCCGGTGTTGTGTCTGTTGCCGGCAATGGACACACCATATCTGCTGCTGGCCCAAGGAACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308488.10
CDS-3UTR GCA 90 bp CTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGAGAGCCGCAAACGCCTGCTCTaGCTCATTGGCCGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: LTDSECIFIHPFSQSQESRKRLL*LIGREG
Trigger: CCCCTCTCGGCCAATGAGGCAGAGCAGGCGTTTGCG...GCTCTCCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR GCA 90 bp GTGCTTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCATTCTTCGCAAACGCCTaGTCTGCCTCATTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: VLSPTPKFCFGPSQIRNAFFANA*SASLAE
Trigger: CTCGGCCAATGAGGCAGAGCAGGCGTTTGCGAAGAA...TGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR GCA 90 bp GGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGGGCTTGCACTGGCTGTaGTGTTGTCCTTGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: GPSQIRNAFSSTLFHKVRGLHWL*CCPWGS
Trigger: AGACCCCCAAGGACAACAGCACAGCCAGTGCAAGCC...CCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CCA 90 bp TTGGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCACCTGCTCTGCCTCATTaGCCGAGAGGGGTGTCGCCT +
Preference number: 4 (lower is better)
Translates to: LGPHRFGMHFHPPFFTKSPALPH*PRGVSP
Trigger: AGGCGACACCCCTCTCGGCCAATGAGGCAGAGCAGG...TGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CCA 90 bp GTGCTTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCAAGGCTAGGCTTGCACTaGCTGTGCTGTTGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: VLSPTPKFCFGPSQIRNARLGLH*LCCCPW
Trigger: CCAAGGACAACAGCACAGCCAGTGCAAGCCTAGCCT...TGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR TCA 90 bp TTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCATTTTGGTGCTCTCTTGTTCTaGGGGCAGGACCCTAGGCTG +
Preference number: 4 (lower is better)
Translates to: FHPPLNSVLGPHRFGMHFGALLF*GQDPRL
Trigger: CAGCCTAGGGTCCTGCCCTCAGAACAAGAGAGCACC...AAAATGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR GCA 90 bp GGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGCCTTCGAGCAGCAGCTaGCCTCTGGGGTCGTTTATT +
Preference number: 4 (lower is better)
Translates to: GPSQIRNAFSSTLFHKVRPSSSS*PLGSFI
Trigger: AATAAACGACCCCAGAGGGCAGCTGCTGCTCGAAGG...CCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR GCA 90 bp GTGCTTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCAGTTTGCGGGATGGTTTaGCTTCCTCTTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VLSPTPKFCFGPSQIRNAVCGMV*LPLPPP
Trigger: AGGAGGAGGAAGAGGAAGGCAAACCATCCCGCAAAC...TGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR GCA 90 bp AAGTGCTTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGTCCGGTGTAGCCGTTTaGGGGATGGTTTGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: KCFHPPLNSVLGPHRFGMSGVAV*GMVCLP
Trigger: AGGAAGGCAAACCATCCCGCAAACGGCTACACCGGA...CATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR GCA 90 bp GTGCTTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCAGGTAGGGCTTCTTGGTaGTCTCTTGTTCTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: VLSPTPKFCFGPSQIRNAGRASW*SLVLRA
Trigger: TGCCCTCAGAACAAGAGAGCACCAAGAAGCCCTACC...TGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CCA 90 bp GTGCTTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCACTGTGCTGTTGTCCTTaGGGGTCTGAGACTTCTCAG +
Preference number: 4 (lower is better)
Translates to: VLSPTPKFCFGPSQIRNALCCCP*GSETSQ
Trigger: CTGAGAAGTCTCAGACCCCCAAGGACAACAGCACAG...TGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR TCA 90 bp GTGCTTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCATTTCTGATTTCTCCTTaGCCGCCTTCGCCGAGTTTC +
Preference number: 4 (lower is better)
Translates to: VLSPTPKFCFGPSQIRNAFLISP*PPSPSF
Trigger: GAAACTCGGCGAAGGCGGTCAAGGAGAAATCAGAAA...TGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR GCA 90 bp GGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGTGGAGAAGTTTCAGCTaGCTCAGGAGAGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: GPSQIRNAFSSTLFHKVRWRSFS*LRRARL
Trigger: AAGCCTGGCTCTCCTGAGGCAGCTGAAACTTCTCCA...CCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR GCA 90 bp AAGTGCTTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCAGAAGGCTCCTCTATaGCAGAGGTCTGGGCATTGT +
Preference number: 4 (lower is better)
Translates to: KCFHPPLNSVLGPHRFGMQKAPL*QRSGHC
Trigger: ACAATGCCCAGACCTCTGGCATAGAGGAGCCTTCTG...CATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR GCA 90 bp GGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGCTGAATACTCGTCTGTaGTTCGGCCCCGCTTTCGAA +
Preference number: 4 (lower is better)
Translates to: GPSQIRNAFSSTLFHKVRLNTRL*FGPAFE
Trigger: TTCGAAAGCGGGGCCGAAGCACAGACGAGTATTCAG...CCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR GCA 90 bp CTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGAGAGCCTCTTCTGGTGCTCCTaGCTCCTGCCCACCACTTGT +
Preference number: 4 (lower is better)
Translates to: LTDSECIFIHPFSQSQESLFWCS*LLPTTC
Trigger: ACAAGTGGTGGGCAGGAGGCAGGAGCACCAGAAGAG...GCTCTCCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR TCA 90 bp TTGGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAACTGGCCCGCTGGTGTaGGAGCTACCGTGGAATAAA +
Preference number: 4 (lower is better)
Translates to: LGPHRFGMHFHPPFFTKSTGPLV*ELPWNK
Trigger: TTTATTCCACGGTAGCTCTCACACCAGCGGGCCAGT...TGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR TCA 90 bp GGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGAGCACTTCATTTCACTaGGGTACCAGGAACACGGCA +
Preference number: 4 (lower is better)
Translates to: GPSQIRNAFSSTLFHKVRSTSFH*GTRNTA
Trigger: TGCCGTGTTCCTGGTACCTCAGTGAAATGAAGTGCT...CCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR GCA 90 bp TTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCATTTTCCTTTCAGGCTCCTGTaGCACTGGCTTCTCCATGCT +
Preference number: 4 (lower is better)
Translates to: FHPPLNSVLGPHRFGMHFPFRLL*HWLLHA
Trigger: AGCATGGAGAAGCCAGTGGCACAGGAGCCTGAAAGG...AAAATGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR GCA 90 bp GTGCTTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCATGGAATATTTCCATCTaGCACGTGTCCGAGAACCAG +
Preference number: 4 (lower is better)
Translates to: VLSPTPKFCFGPSQIRNAWNISI*HVSENQ
Trigger: CTGGTTCTCGGACACGTGGCAGATGGAAATATTCCA...TGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR GCA 90 bp AAGTGCTTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGACGGGCAGGCTGATTTaGATCTCCATGAGCATTGTC +
Preference number: 4 (lower is better)
Translates to: KCFHPPLNSVLGPHRFGMTGRLI*ISMSIV
Trigger: GACAATGCTCATGGAGATGCAAATCAGCCTGCCCGT...CATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CCA 90 bp AAGTGCTTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCGAAGGCAGGCAGTATaGTATCCACTATCGCAAGAG +
Preference number: 4 (lower is better)
Translates to: KCFHPPLNSVLGPHRFGMRRQAV*YPLSQE
Trigger: CTCTTGCGATAGTGGATACCATACTGCCTGCCTTCG...CATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CCA 90 bp GTGCTTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCAGAACCATTCTCCATCTaGGATGATCATCAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: VLSPTPKFCFGPSQIRNAEPFSI*DDHQRR
Trigger: CCTCCTCTGATGATCATCCCAGATGGAGAATGGTTC...TGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CCA 90 bp GGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGCGTCGCAAACTCTTCTaGGAACCGTCACTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: GPSQIRNAFSSTLFHKVRRRKLF*EPSLSE
Trigger: CTCAGAAAGTGACGGTTCCCAGAAGAGTTTGCGACG...CCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CCA 90 bp TTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCATTTTCACCACTTGTCCCATTaGAGGCTAGGCTTGCACTGG +
Preference number: 4 (lower is better)
Translates to: FHPPLNSVLGPHRFGMHFHHLSH*RLGLHW
Trigger: CCAGTGCAAGCCTAGCCTCCAATGGGACAAGTGGTG...AAAATGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR TCA 90 bp GTGCTTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCAAGCTGTTTCCCTTCATaGCCCAAAGCAGTGATTGTA +
Preference number: 4 (lower is better)
Translates to: VLSPTPKFCFGPSQIRNASCFPS*PKAVIV
Trigger: TACAATCACTGCTTTGGGTCATGAAGGGAAACAGCT...TGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR TCA 90 bp AAGTGCTTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCAGCTTTCTGATCTCTaGTCTCAGCCACTTTTGCAG +
Preference number: 4 (lower is better)
Translates to: KCFHPPLNSVLGPHRFGMQLSDL*SQPLLQ
Trigger: CTGCAAAAGTGGCTGAGATCAGAGATCAGAAAGCTG...CATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR TCA 90 bp GGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGATGTCTTTCCCACGATaGCCTGTGATGGTGGAGATA +
Preference number: 4 (lower is better)
Translates to: GPSQIRNAFSSTLFHKVRMSFPR*PVMVEI
Trigger: TATCTCCACCATCACAGGTCATCGTGGGAAAGACAT...CCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR TCA 90 bp CTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGAGAGCTTGTCCTTGGGGGTCTaGGACTTCTCAGTAGGCTTG +
Preference number: 4 (lower is better)
Translates to: LTDSECIFIHPFSQSQESLSLGV*DFSVGL
Trigger: CAAGCCTACTGAGAAGTCTCAGACCCCCAAGGACAA...GCTCTCCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR GCA 90 bp GTGCTTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCAATGGGCTCCCCACTTTaGCTACATTTTCAAAGTCCT +
Preference number: 4 (lower is better)
Translates to: VLSPTPKFCFGPSQIRNAMGSPL*LHFQSP
Trigger: AGGACTTTGAAAATGTAGGCAAAGTGGGGAGCCCAT...TGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CCA 90 bp TTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCATTTTTCCGGTAGGGCTTCTTaGTGCTCTCTTGTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: FHPPLNSVLGPHRFGMHFSGRAS*CSLVLR
Trigger: CCTCAGAACAAGAGAGCACCAAGAAGCCCTACCGGA...AAAATGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CCA 90 bp GGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGCAATCAAGTTCTCAATaGCTTTGCCAGGGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: GPSQIRNAFSSTLFHKVRQSSSQ*LCQGSV
Trigger: GACAGAGCCCTGGCAAAGCCATTGAGAACTTGATTG...CCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CCA 90 bp AAGTGCTTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGACAGCTTTTAATAACTaGCCCGCTGGTGTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: KCFHPPLNSVLGPHRFGMTAFNN*PAGVRA
Trigger: AGCTCTCACACCAGCGGGCCAGTTATTAAAAGCTGT...CATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR TCA 90 bp TTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCATTTTGCTCTCTTCACTCTCTaGGCTGGAAAGTCTTCGCTT +
Preference number: 4 (lower is better)
Translates to: FHPPLNSVLGPHRFGMHFALFTL*AGKSSL
Trigger: AAGCGAAGACTTTCCAGCTCAGAGAGTGAAGAGAGC...AAAATGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR GCA 90 bp GGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGCAGTCCATCGAACTTTaGCTTTGGGTTTTACCTTGC +
Preference number: 4 (lower is better)
Translates to: GPSQIRNAFSSTLFHKVRQSIEL*LWVLPC
Trigger: GCAAGGTAAAACCCAAAGGCAAAGTTCGATGGACTG...CCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR GCA 90 bp TTGGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAAGTTCTCAATGGCTTTaGCAGGGCTCTGTCCATTGG +
Preference number: 4 (lower is better)
Translates to: LGPHRFGMHFHPPFFTKSSSQWL*QGSVHW
Trigger: CCAATGGACAGAGCCCTGGCAAAGCCATTGAGAACT...TGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CCA 90 bp CTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGAGAGCCTGGTTCTAGAACTTTaGGGGGAGAATCGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LTDSECIFIHPFSQSQESLVLEL*GENRAS
Trigger: AGAAGCCCGATTCTCCCCCCAAAGTTCTAGAACCAG...GCTCTCCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CCA 90 bp AAGTGCTTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGTTTATGTTGGCAAGGTaGGCAGAACCATTCTCCATC +
Preference number: 4 (lower is better)
Translates to: KCFHPPLNSVLGPHRFGMFMLAR*AEPFSI
Trigger: GATGGAGAATGGTTCTGCCCACCTTGCCAACATAAA...CATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CCA 90 bp GGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGCTTCACTCTCTGAGCTaGAAAGTCTTCGCTTGTGTA +
Preference number: 4 (lower is better)
Translates to: GPSQIRNAFSSTLFHKVRLHSLS*KVFACV
Trigger: TACACAAGCGAAGACTTTCCAGCTCAGAGAGTGAAG...CCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR TCA 90 bp TTGGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCATCCCACGATGACCTGTaGTGGTGGAGATATCTTTTC +
Preference number: 4 (lower is better)
Translates to: LGPHRFGMHFHPPFFTKSSHDDL*WWRYLF
Trigger: GAAAAGATATCTCCACCATCACAGGTCATCGTGGGA...TGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR TCA 90 bp GTGCTTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCAGGAACCGTCACTTTCTaGGTCTTCTTTGTAGTTAAT +
Preference number: 4 (lower is better)
Translates to: VLSPTPKFCFGPSQIRNAGTVTF*VFFVVN
Trigger: ATTAACTACAAAGAAGACTCAGAAAGTGACGGTTCC...TGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CCA 90 bp GGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGCAAAGGTCCCTTGACTaGACTGTCAAAATCATCACT +
Preference number: 4 (lower is better)
Translates to: GPSQIRNAFSSTLFHKVRQRSLD*TVKIIT
Trigger: AGTGATGATTTTGACAGTCCAGTCAAGGGACCTTTG...CCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CCA 90 bp GGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGAGAAGTTTCCATTTCTaGAGGATCGGGTTCCTCTAT +
Preference number: 4 (lower is better)
Translates to: GPSQIRNAFSSTLFHKVRRSFHF*RIGFLY
Trigger: ATAGAGGAACCCGATCCTCCAGAAATGGAAACTTCT...CCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CCA 90 bp TTGGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCATCTCTTCACCTTTCATaGTACACGACTCGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: LGPHRFGMHFHPPFFTKSSLHLS*YTTRWK
Trigger: CTTCCACCGAGTCGTGTACCATGAAAGGTGAAGAGA...TGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CCA 90 bp TTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCATTTTTCTATGCCAGAGGTCTaGGCATTGTCCAGATTATCC +
Preference number: 4 (lower is better)
Translates to: FHPPLNSVLGPHRFGMHFSMPEV*ALSRLS
Trigger: GGATAATCTGGACAATGCCCAGACCTCTGGCATAGA...AAAATGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CCA 90 bp CTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGAGAGCCAGAGCAGTTTATGTTaGCAAGGTGGGCAGAACCAT +
Preference number: 4 (lower is better)
Translates to: LTDSECIFIHPFSQSQESQSSLC*QGGQNH
Trigger: ATGGTTCTGCCCACCTTGCCAACATAAACTGCTCTG...GCTCTCCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CCA 90 bp TTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCATTTTGCAGCAGCTGCCCTCTaGGGTCGTTTATTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: FHPPLNSVLGPHRFGMHFAAAAL*GRLFSF
Trigger: AAAAGAAAATAAACGACCCCAGAGGGCAGCTGCTGC...AAAATGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CCA 90 bp TTGGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCACAGGGCTCTGTCCATTaGTTGAAGGTAAGTCCACTA +
Preference number: 4 (lower is better)
Translates to: LGPHRFGMHFHPPFFTKSQGSVH*LKVSPL
Trigger: TAGTGGACTTACCTTCAACCAATGGACAGAGCCCTG...TGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480887.5
3UTR CAA 72 bp AAGCACAAGTGCTTTCACCCACCCCTAAATTCTGTTTaGGGCCCTCACAGATTCGGAATGCATTTTCATCCA +
Preference number: 4 (lower is better)
Translates to: KHKCFHPPLNSV*GPHRFGMHFHP
Trigger: TGGATGAAAATGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCACTTGTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308488.10
ENST00000480887.5
3UTR CAA 72 bp ACCCTTTCAAAGTGTACACACAACCTCATGGCAGGTTaGGGCAAGCTACAACAGATACCATCTCAAGAAGCT +
Preference number: 4 (lower is better)
Translates to: TLSKCTHNLMAG*GKLQQIPSQEA
Trigger: AGCTTCTTGAGATGGTATCTGTTGTAGCTTGCCCAAACCTGCCATGAGGTTGTGTGTACACTTTGAAAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308488.10
CDS-3UTR TCA 90 bp GGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGTTTCCTTGTTCTTGTTaGCCTCCTTTCAAGCAAGTT +
Preference number: 4 (lower is better)
Translates to: GPSQIRNAFSSTLFHKVRFPCSC*PPFKQV
Trigger: AACTTGCTTGAAAGGAGGTCAACAAGAACAAGGAAA...CCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CCA 90 bp GTGCTTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCAACAGTACTTGTACTCTaGCATTCTACCACTTCTTTT +
Preference number: 4 (lower is better)
Translates to: VLSPTPKFCFGPSQIRNATVLVL*HSTTSF
Trigger: AAAAGAAGTGGTAGAATGCCAGAGTACAAGTACTGT...TGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CCA 90 bp GTGCTTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCAAAAGTCTGGCTCTTGTaGAGGAATGATGTTTTCAAT +
Preference number: 4 (lower is better)
Translates to: VLSPTPKFCFGPSQIRNAKVWLL*RNDVFN
Trigger: ATTGAAAACATCATTCCTCCACAAGAGCCAGACTTT...TGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CCA 90 bp GGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGATCTTCAGAAAAGTCTaGCTCTTGTGGAGGAATGAT +
Preference number: 4 (lower is better)
Translates to: GPSQIRNAFSSTLFHKVRIFRKV*LLWRND
Trigger: ATCATTCCTCCACAAGAGCCAGACTTTTCTGAAGAT...CCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CCA 90 bp GTGCTTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCATTCTTCACTTTCATCTaGGTTTTCATCAGACACAAC +
Preference number: 4 (lower is better)
Translates to: VLSPTPKFCFGPSQIRNAFFTFI*VFIRHN
Trigger: GTTGTGTCTGATGAAAACCCAGATGAAAGTGAAGAA...TGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CCA 90 bp AAGTGCTTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCATCTTCAGAGTTCTTaGACAAATAGCTCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: KCFHPPLNSVLGPHRFGMHLQSS*TNSSLH
Trigger: GTGAAGAGAGCTATTTGTCCAAGAACTCTGAAGATG...CATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CCA 90 bp GTGCTTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCATTCAAAGTTCAGAACTaGTCACTTCACAGAAAGACT +
Preference number: 4 (lower is better)
Translates to: VLSPTPKFCFGPSQIRNAFKVQN*SLHRKT
Trigger: AGTCTTTCTGTGAAGTGACCAGTTCTGAACTTTGAA...TGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR GCA 90 bp AAGTGCTTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGTGGACTCAATCTTTGTaGGTCCTTATCAAGAAAAGT +
Preference number: 4 (lower is better)
Translates to: KCFHPPLNSVLGPHRFGMWTQSL*VLIKKS
Trigger: ACTTTTCTTGATAAGGACGCACAAAGATTGAGTCCA...CATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR GCA 90 bp TTGGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGATCTCAGCCACTTTTaGAGTGGGTCTAGATATTCT +
Preference number: 4 (lower is better)
Translates to: LGPHRFGMHFHPPFFTKSDLSHF*SGSRYS
Trigger: AGAATATCTAGACCCACTGCAAAAGTGGCTGAGATC...TGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR GCA 90 bp CTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGAGAGCCTTCTTCATCCAGGTTaGTATCACTGTCCAGATCAT +
Preference number: 4 (lower is better)
Translates to: LTDSECIFIHPFSQSQESLLHPG*YHCPDH
Trigger: ATGATCTGGACAGTGATAGCAACCTGGATGAAGAAG...GCTCTCCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR GCA 90 bp TTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCATTTTAAGCTAAAGCACAAGTaGTTTCACCCACCCCTAAAT +
Preference number: 4 (lower is better)
Translates to: FHPPLNSVLGPHRFGMHFKLKHK*FHPPLN
Trigger: ATTTAGGGGTGGGTGAAAGCACTTGTGCTTTAGCTT...AAAATGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CCA 90 bp GTGCTTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCATTCTGTCTTAAAATTTaGAGCTACCCTTTCATCACT +
Preference number: 4 (lower is better)
Translates to: VLSPTPKFCFGPSQIRNAFCLKI*SYPFIT
Trigger: AGTGATGAAAGGGTAGCTCCAAATTTTAAGACAGAA...TGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CCA 90 bp CTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGAGAGCTGGTACACGACTCGGTaGAAGATAAAGCAGTTTTTG +
Preference number: 4 (lower is better)
Translates to: LTDSECIFIHPFSQSQESWYTTR*KIKQFL
Trigger: CAAAAACTGCTTTATCTTCCACCGAGTCGTGTACCA...GCTCTCCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CCA 90 bp AAGTGCTTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGGCTAGTTTCTCACAGTaGTCAATGATATTAGATGGT +
Preference number: 4 (lower is better)
Translates to: KCFHPPLNSVLGPHRFGMASFSQ*SMILDG
Trigger: ACCATCTAATATCATTGACCACTGTGAGAAACTAGC...CATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR TCA 90 bp CTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGAGAGCTTTCTAGCTTCACTATaGCTGGCAGTTTCACAAGTT +
Preference number: 4 (lower is better)
Translates to: LTDSECIFIHPFSQSQESFLASL*LAVSQV
Trigger: AACTTGTGAAACTGCCAGTCATAGTGAAGCTAGAAA...GCTCTCCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR TCA 90 bp TTGGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCATTTTTATCAGCTTTCTaGTCTCTGATCTCAGCCACT +
Preference number: 4 (lower is better)
Translates to: LGPHRFGMHFHPPFFTKSFLSAF*SLISAT
Trigger: AGTGGCTGAGATCAGAGATCAGAAAGCTGATAAAAA...TGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR GCA 90 bp TTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCATTTTAGTGGTATCTTGGCCTaGTGGTCATTTTTAAGTTTC +
Preference number: 4 (lower is better)
Translates to: FHPPLNSVLGPHRFGMHFSGILA*WSFLSF
Trigger: GAAACTTAAAAATGACCAGCAGGCCAAGATACCACT...AAAATGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR GCA 90 bp TTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCATTTTGGGTTCCTCTATTTGTaGTTTTTGACTATGGATCTC +
Preference number: 4 (lower is better)
Translates to: FHPPLNSVLGPHRFGMHFGFLYL*FLTMDL
Trigger: GAGATCCATAGTCAAAAAGCACAAATAGAGGAACCC...AAAATGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR GCA 90 bp CTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGAGAGCCAGATGATTTTTCACTaGCAGACCCTTCACTTTCAT +
Preference number: 4 (lower is better)
Translates to: LTDSECIFIHPFSQSQESQMIFH*QTLHFH
Trigger: ATGAAAGTGAAGGGTCTGGCAGTGAAAAATCATCTG...GCTCTCCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR GCA 90 bp TTGGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCACTCACAGATTCGGAATaGATTTTCATCCACCCTTTT +
Preference number: 4 (lower is better)
Translates to: LGPHRFGMHFHPPFFTKSLTDSE*IFIHPF
Trigger: AAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAG...TGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CCA 90 bp TTGGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAAACTTCTTCTGGTATTaGACTCAATCTTTGTGCGTC +
Preference number: 4 (lower is better)
Translates to: LGPHRFGMHFHPPFFTKSNFFWY*TQSLCV
Trigger: GACGCACAAAGATTGAGTCCAATACCAGAAGAAGTT...TGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CCA 90 bp CTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGAGAGCAATGATATTAGATGGTaGAGAAGTTTCAGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: LTDSECIFIHPFSQSQESNDIRW*RSFSCL
Trigger: GAGGCAGCTGAAACTTCTCCACCATCTAATATCATT...GCTCTCCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CCA 90 bp TTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCATTTTGTCAATGATATTAGATaGTGGAGAAGTTTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: FHPPLNSVLGPHRFGMHFVNDIR*WRSFSC
Trigger: GCAGCTGAAACTTCTCCACCATCTAATATCATTGAC...AAAATGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CCA 90 bp TTGGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAAGAATTAGCTCAGGATaGTTTGGAAGGCCACATTTT +
Preference number: 4 (lower is better)
Translates to: LGPHRFGMHFHPPFFTKSRISSG*FGRPHF
Trigger: AAAATGTGGCCTTCCAAACCATCCTGAGCTAATTCT...TGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CCA 90 bp CTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGAGAGCCCAGGAACACGGCAGTaGGAAAATGAAAAATATAGA +
Preference number: 4 (lower is better)
Translates to: LTDSECIFIHPFSQSQESPGTRQ*ENEKYR
Trigger: TCTATATTTTTCATTTTCCCACTGCCGTGTTCCTGG...GCTCTCCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000480887.5
3UTR CAA 72 bp AGTACATTATGTGACAGAGAGCACTCCAGCTTCTATTaGACTAACAGCATGGTCCTGATTACCTCAAGAGTT +
Preference number: 4 (lower is better)
Translates to: STLCDREHSSFY*TNSMVLITSRV
Trigger: AACTCTTGAGGTAATCAGGACCATGCTGTTAGTCAAATAGAAGCTGGAGTGCTCTCTGTCACATAATGTACT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308488.10
CDS-3UTR TCA 90 bp CTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGAGAGCCCATTTCTACCTTTGTaGACTCAGAATCCTCTTTTA +
Preference number: 4 (lower is better)
Translates to: LTDSECIFIHPFSQSQESPFLPL*TQNPLL
Trigger: TAAAAGAGGATTCTGAGTTCACAAAGGTAGAAATGG...GCTCTCCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR TCA 90 bp TTGGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCATTAATTTGTCTTTTCTaGTTTCTCCTTGACCGCCTT +
Preference number: 4 (lower is better)
Translates to: LGPHRFGMHFHPPFFTKSLICLF*FLLDRL
Trigger: AAGGCGGTCAAGGAGAAATCAGAAAAGACAAATTAA...TGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR TCA 90 bp TTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCATTTTAATTACCAAGGACCATaGACCTGGAAAAAGAAAATC +
Preference number: 4 (lower is better)
Translates to: FHPPLNSVLGPHRFGMHFNYQGP*TWKKKI
Trigger: GATTTTCTTTTTCCAGGTTCATGGTCCTTGGTAATT...AAAATGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR TCA 90 bp TTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCATTTTATCAAATGCCACCACTaGACATTTCAGAAGTTAGTA +
Preference number: 4 (lower is better)
Translates to: FHPPLNSVLGPHRFGMHFIKCHH*TFQKLV
Trigger: TACTAACTTCTGAAATGTTCAGTGGTGGCATTTGAT...AAAATGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR GCA 90 bp TTGGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCATCTAAATCCATAGGCTaGTCCTCACTTTTCATCTTT +
Preference number: 4 (lower is better)
Translates to: LGPHRFGMHFHPPFFTKSSKSIG*SSLFIF
Trigger: AAAGATGAAAAGTGAGGAGCAGCCTATGGATTTAGA...TGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR GCA 90 bp CTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGAGAGCGCAACATCCAAATCCTaGAACTGTTCCTCTAATTTT +
Preference number: 4 (lower is better)
Translates to: LTDSECIFIHPFSQSQESATSKS*NCSSNF
Trigger: AAAATTAGAGGAACAGTTGCAGGATTTGGATGTTGC...GCTCTCCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CCA 90 bp TTGGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCACTTTGGAACTTCTTCTaGTATTGGACTCAATCTTTG +
Preference number: 4 (lower is better)
Translates to: LGPHRFGMHFHPPFFTKSLWNFF*YWTQSL
Trigger: CAAAGATTGAGTCCAATACCAGAAGAAGTTCCAAAG...TGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480887.5
3UTR CAA 72 bp ACATTCACTATCAAGTTGACGAACACTTATTCAAGTTaGGTAAATATCAGGCAGCACAGCACAAGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: TFTIKLTNTYSS*VNIRQHSTSGL
Trigger: GAGACCACTTGTGCTGTGCTGCCTGATATTTACCAAACTTGAATAAGTGTTCGTCAACTTGATAGTGAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR CAA 72 bp CATTTCACTAATAACTCTCCATCAGACACAATATATTaGAGGCCACCTTATTACCACTGCATAAAGCTTATT +
Preference number: 4 (lower is better)
Translates to: HFTNNSPSDTIY*RPPYYHCIKLI
Trigger: AATAAGCTTTATGCAGTGGTAATAAGGTGGCCTCAAATATATTGTGTCTGATGGAGAGTTATTAGTGAAATG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308488.10
3UTR CAA 72 bp AAATATAAGGTGAGAAGGGGTACATTCACTATCAAGTaGACGAACACTTATTCAAGTTTGGTAAATATCAGG +
Preference number: 4 (lower is better)
Translates to: KYKVRRGTFTIK*TNTYSSLVNIR
Trigger: CCTGATATTTACCAAACTTGAATAAGTGTTCGTCAACTTGATAGTGAATGTACCCCTTCTCACCTTATATTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308488.10
CDS CCA 90 bp GCAGCGGCCCGTAGCGCTCCAAGAAGGAGCAGACTACGGCGAAGTTaGGGCACGAACCCGGGCAGCCCGGAGGAGCCATCACCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: AAARSAPRRSRLRRS*GTNPGSPEEPSPPP
Trigger: CGGCGGCGGTGATGGCTCCTCCGGGCTGCCCGGGTTCGTGCCCCAACTTCGCCGTAGTCTGCTCCTTCTTGGAGCGCTACGGGCCGCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308488.11
ENST00000440064.2
ENST00000467567.1
ENST00000528095.5
ENST00000530604.1
CDS CCA 90 bp AGGGATGGCAAGGCAACCTTACAGACGACAGGAGGCGCTCTCAAGTaGGCTCCTCTGCGGATCCCAGCGTCTCAGGGACGGCTCCGCGAT +
Preference number: 5 (lower is better)
Translates to: RDGKATLQTTGGALK*APLRIPASQGRLRD
Trigger: ATCGCGGAGCCGTCCCTGAGACGCTGGGATCCGCAGAGGAGCCCACTTGAGAGCGCCTCCTGTCGTCTGTAAGGTTGCCTTGCCATCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467567.1
CDS TCA 90 bp CTCATCACTTTCTATCCGGTAGGGCTTCTTGGTGCTCTCTTGTTCTaGGGGCAGGACCCTAGGCTGGCTGTCACGGGCAGGCTGATTTGC +
Preference number: 5 (lower is better)
Translates to: LITFYPVGLLGALLF*GQDPRLAVTGRLIC
Trigger: GCAAATCAGCCTGCCCGTGACAGCCAGCCTAGGGTCCTGCCCTCAGAACAAGAGAGCACCAAGAAGCCCTACCGGATAGAAAGTGATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308488.11
ENST00000480887.5
CDS-3UTR CAA 90 bp TTGGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGCCTGCTCTGCCTCATaGGCCGAGAGGGGTGTCGCC +
Preference number: 5 (lower is better)
Translates to: LGPHRFGMHFHPPFFTKSACSAS*AERGVA
Trigger: GGCGACACCCCTCTCGGCCAATGAGGCAGAGCAGGC...TGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS TCA 90 bp TTGGAGGCTAGGCTTGCACTGGCTGTGCTGTTGTCCTTGGGGGTCTaGGACTTCTCAGTAGGCTTGCCAATCAAGTTCTCAATGGCTTTG +
Preference number: 5 (lower is better)
Translates to: LEARLALAVLLSLGV*DFSVGLPIKFSMAL
Trigger: CAAAGCCATTGAGAACTTGATTGGCAAGCCTACTGAGAAGTCTCAGACCCCCAAGGACAACAGCACAGCCAGTGCAAGCCTAGCCTCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308488.11
ENST00000480887.5
CDS CCA 90 bp ACAGAGCAGTTTATGTTGGCAAGGTGGGCAGAACCATTCTCCATCTaGGATGATCATCAGAGGAGGGCGAAGGCAGGCAGTATGGTATCC +
Preference number: 5 (lower is better)
Translates to: TEQFMLARWAEPFSI*DDHQRRAKAGSMVS
Trigger: GGATACCATACTGCCTGCCTTCGCCCTCCTCTGATGATCATCCCAGATGGAGAATGGTTCTGCCCACCTTGCCAACATAAACTGCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308488.11
ENST00000480887.5
ENST00000526324.5
ENST00000531026.5
ENST00000531768.1
CDS-3UTR CAA 90 bp GGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGATCCGGTGTAGCCGTTaGCGGGATGGTTTGCCTTCC +
Preference number: 5 (lower is better)
Translates to: GPSQIRNAFSSTLFHKVRIRCSR*RDGLPS
Trigger: GGAAGGCAAACCATCCCGCAAACGGCTACACCGGAT...CCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CAA 90 bp GGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGCCACCACTTGTCCCATaGGAGGCTAGGCTTGCACTG +
Preference number: 5 (lower is better)
Translates to: GPSQIRNAFSSTLFHKVRPPLVP*EARLAL
Trigger: CAGTGCAAGCCTAGCCTCCAATGGGACAAGTGGTGG...CCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CAA 90 bp TTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCATTTTCCTCCTGCCCACCACTaGTCCCATTGGAGGCTAGGC +
Preference number: 5 (lower is better)
Translates to: FHPPLNSVLGPHRFGMHFPPAHH*SHWRLG
Trigger: GCCTAGCCTCCAATGGGACAAGTGGTGGGCAGGAGG...AAAATGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CAA 90 bp GTGCTTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCACACGGGCAGGCTGATTaGCATCTCCATGAGCATTGT +
Preference number: 5 (lower is better)
Translates to: VLSPTPKFCFGPSQIRNAHGQAD*HLHEHC
Trigger: ACAATGCTCATGGAGATGCAAATCAGCCTGCCCGTG...TGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS CCA 90 bp GCTTGCCAATCAAGTTCTCAATGGCTTTGCCAGGGCTCTGTCCATTaGTTGAAGGTAAGTCCACTAAGCTATAGTCCAATGGGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: ACQSSSQWLCQGSVH*LKVSPLSYSPMGSP
Trigger: TGGGGAGCCCATTGGACTATAGCTTAGTGGACTTACCTTCAACCAATGGACAGAGCCCTGGCAAAGCCATTGAGAACTTGATTGGCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308488.11
ENST00000480887.5
CDS-3UTR CAA 90 bp TTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCATTTTCGTTTGCGGGATGGTTaGCCTTCCTCTTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: FHPPLNSVLGPHRFGMHFRLRDG*PSSSSS
Trigger: GGAGGAGGAAGAGGAAGGCAAACCATCCCGCAAACG...AAAATGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CAA 90 bp AAGTGCTTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCCAGGGCTCTGTCCATaGGTTGAAGGTAAGTCCACT +
Preference number: 5 (lower is better)
Translates to: KCFHPPLNSVLGPHRFGMPGLCP*VEGKST
Trigger: AGTGGACTTACCTTCAACCAATGGACAGAGCCCTGG...CATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CAA 90 bp GTGCTTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCACCAGAGGTCTGGGCATaGTCCAGATTATCCATTTCT +
Preference number: 5 (lower is better)
Translates to: VLSPTPKFCFGPSQIRNAPEVWA*SRLSIS
Trigger: AGAAATGGATAATCTGGACAATGCCCAGACCTCTGG...TGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CAA 90 bp GTGCTTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCATTTTCTGATTTCTCCTaGACCGCCTTCGCCGAGTTT +
Preference number: 5 (lower is better)
Translates to: VLSPTPKFCFGPSQIRNAFSDFS*TAFAEF
Trigger: AAACTCGGCGAAGGCGGTCAAGGAGAAATCAGAAAA...TGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CAA 90 bp CTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGAGAGCCATTGGAGGCTAGGCTaGCACTGGCTGTGCTGTTGT +
Preference number: 5 (lower is better)
Translates to: LTDSECIFIHPFSQSQESHWRLG*HWLCCC
Trigger: ACAACAGCACAGCCAGTGCAAGCCTAGCCTCCAATG...GCTCTCCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CAA 90 bp AAGTGCTTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCCCCTAAATTCTGTTTaGGGCCCTCACAGATTCGGA +
Preference number: 5 (lower is better)
Translates to: KCFHPPLNSVLGPHRFGMPLNSV*GPHRFG
Trigger: TCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGG...CATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CAA 90 bp GGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGCAAGACATTCTAGGATaGGTGGGCGCTTATCCTTCT +
Preference number: 5 (lower is better)
Translates to: GPSQIRNAFSSTLFHKVRQDILG*VGAYPS
Trigger: AGAAGGATAAGCGCCCACCAATCCTAGAATGTCTTG...CCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CAA 90 bp GTGCTTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCAGACTTCTCAGTAGGCTaGCCAATCAAGTTCTCAATG +
Preference number: 5 (lower is better)
Translates to: VLSPTPKFCFGPSQIRNADFSVG*PIKFSM
Trigger: CATTGAGAACTTGATTGGCAAGCCTACTGAGAAGTC...TGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CAA 90 bp CTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGAGAGCGGCCACCAACAGTACTaGTACTCTGGCATTCTACCA +
Preference number: 5 (lower is better)
Translates to: LTDSECIFIHPFSQSQESGHQQY*YSGILP
Trigger: TGGTAGAATGCCAGAGTACAAGTACTGTTGGTGGCC...GCTCTCCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CAA 90 bp CTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGAGAGCACAGAGCAGTTTATGTaGGCAAGGTGGGCAGAACCA +
Preference number: 5 (lower is better)
Translates to: LTDSECIFIHPFSQSQESTEQFM*ARWAEP
Trigger: TGGTTCTGCCCACCTTGCCAACATAAACTGCTCTGT...GCTCTCCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CAA 90 bp GGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGCTGGAAAGTCTTCGCTaGTGTACTCGCCTTATTTCT +
Preference number: 5 (lower is better)
Translates to: GPSQIRNAFSSTLFHKVRLESLR*CTRLIS
Trigger: AGAAATAAGGCGAGTACACAAGCGAAGACTTTCCAG...CCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CAA 90 bp CTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGAGAGCGGCTCTGTCCATTGGTaGAAGGTAAGTCCACTAAGC +
Preference number: 5 (lower is better)
Translates to: LTDSECIFIHPFSQSQESGSVHW*KVSPLS
Trigger: GCTTAGTGGACTTACCTTCAACCAATGGACAGAGCC...GCTCTCCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CAA 90 bp TTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCATTTTAAGTTCTCAATGGCTTaGCCAGGGCTCTGTCCATTG +
Preference number: 5 (lower is better)
Translates to: FHPPLNSVLGPHRFGMHFKFSMA*PGLCPL
Trigger: CAATGGACAGAGCCCTGGCAAAGCCATTGAGAACTT...AAAATGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CAA 90 bp AAGTGCTTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGGTCTCTTCTAGAACATaGGCTGTAGAACGGTTTTCT +
Preference number: 5 (lower is better)
Translates to: KCFHPPLNSVLGPHRFGMVSSRT*AVERFS
Trigger: AGAAAACCGTTCTACAGCCAATGTTCTAGAAGAGAC...CATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CAA 90 bp GGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGTTACACAAAGGTCCCTaGACTGGACTGTCAAAATCA +
Preference number: 5 (lower is better)
Translates to: GPSQIRNAFSSTLFHKVRLHKGP*TGLSKS
Trigger: TGATTTTGACAGTCCAGTCAAGGGACCTTTGTGTAA...CCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CAA 90 bp CTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGAGAGCCCAGTCCATCGAACTTaGCCTTTGGGTTTTACCTTG +
Preference number: 5 (lower is better)
Translates to: LTDSECIFIHPFSQSQESPVHRT*PLGFTL
Trigger: CAAGGTAAAACCCAAAGGCAAAGTTCGATGGACTGG...GCTCTCCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CAA 90 bp CTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGAGAGCAATGGGCTCCCCACTTaGCCTACATTTTCAAAGTCC +
Preference number: 5 (lower is better)
Translates to: LTDSECIFIHPFSQSQESNGLPT*PTFSKS
Trigger: GGACTTTGAAAATGTAGGCAAAGTGGGGAGCCCATT...GCTCTCCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS GCA 90 bp TTGAAGGTAAGTCCACTAAGCTATAGTCCAATGGGCTCCCCACTTTaGCTACATTTTCAAAGTCCTCTTCCTCATCACTTTCTATCCGGT +
Preference number: 5 (lower is better)
Translates to: LKVSPLSYSPMGSPL*LHFQSPLPHHFLSG
Trigger: ACCGGATAGAAAGTGATGAGGAAGAGGACTTTGAAAATGTAGGCAAAGTGGGGAGCCCATTGGACTATAGCTTAGTGGACTTACCTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308488.11
ENST00000480887.5
CDS CCA 90 bp CTCTGGCATTCTACCACTTCTTTTTCTGAGGCTAGTTTCTCACAGTaGTCAATGATATTAGATGGTGGAGAAGTTTCAGCTGCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: LWHSTTSFSEASFSQ*SMILDGGEVSAASG
Trigger: TCCTGAGGCAGCTGAAACTTCTCCACCATCTAATATCATTGACCACTGTGAGAAACTAGCCTCAGAAAAAGAAGTGGTAGAATGCCAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308488.11
ENST00000480887.5
ENST00000526324.5
ENST00000528095.5
CDS CCA 90 bp GAAGATAATTTGTCCACAGACTGGGGGTGGTGGGTGGGAGGGAGATaGTTTGGGGATGATTCAAATGCATTACATTTGAATCAACTAGAT +
Preference number: 5 (lower is better)
Translates to: EDNLSTDWGWWVGGR*FGDDSNALHLNQLD
Trigger: ATCTAGTTGATTCAAATGTAATGCATTTGAATCATCCCCAAACCATCTCCCTCCCACCCACCACCCCCAGTCTGTGGACAAATTATCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467567.1
CDS CCA 90 bp AAGGAGACAGTACTACTTGAGCTGAGACCTAAAGGACAAATAAGTTaGCTAGGAAAACAAACTGGTGGGAAGGTACTCCAGGCAGAAGAT +
Preference number: 5 (lower is better)
Translates to: KETVLLELRPKGQIS*LGKQTGGKVLQAED
Trigger: ATCTTCTGCCTGGAGTACCTTCCCACCAGTTTGTTTTCCTAGCCAACTTATTTGTCCTTTAGGTCTCAGCTCAAGTAGTACTGTCTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467567.1
CDS-3UTR CAA 90 bp GTGCTTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCAGGTTTGACATTTTCCTaGAAGGAATCACTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: VLSPTPKFCFGPSQIRNAGLTFS*KESLSS
Trigger: AGAAGAAAGTGATTCCTTCAAGGAAAATGTCAAACC...TGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CAA 90 bp GTGCTTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCATTGAAGAGAGATCTTTaGCCATCTCAGAAGAATCAA +
Preference number: 5 (lower is better)
Translates to: VLSPTPKFCFGPSQIRNALKRDL*PSQKNQ
Trigger: TTGATTCTTCTGAGATGGCAAAAGATCTCTCTTCAA...TGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CAA 90 bp AAGTGCTTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGACTCTAGAGTACTCTTaGGAACTTCTTCTGGTATTG +
Preference number: 5 (lower is better)
Translates to: KCFHPPLNSVLGPHRFGMTLEYS*ELLLVL
Trigger: CAATACCAGAAGAAGTTCCAAAGAGTACTCTAGAGT...CATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CAA 90 bp AAGTGCTTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCCTTCACTTTCATCATaGCTGGAATATTTCCATCTG +
Preference number: 5 (lower is better)
Translates to: KCFHPPLNSVLGPHRFGMPSLSS*LEYFHL
Trigger: CAGATGGAAATATTCCAGCAATGATGAAAGTGAAGG...CATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CAA 90 bp GGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGATTTCCTTGTTCTTGTaGACCTCCTTTCAAGCAAGT +
Preference number: 5 (lower is better)
Translates to: GPSQIRNAFSSTLFHKVRISLFL*TSFQAS
Trigger: ACTTGCTTGAAAGGAGGTCAACAAGAACAAGGAAAT...CCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CAA 90 bp TTGGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCACCTCCATCGGCTTCTTaGATGTCATCTTCAATAGCT +
Preference number: 5 (lower is better)
Translates to: LGPHRFGMHFHPPFFTKSPPSAS*MSSSIA
Trigger: AGCTATTGAAGATGACATCAAAGAAGCCGATGGAGG...TGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CAA 90 bp TTGGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGATCCATCACTGATCTaGAATTCATCCTCGCTCTCT +
Preference number: 5 (lower is better)
Translates to: LGPHRFGMHFHPPFFTKSDPSLI*NSSSLS
Trigger: AGAGAGCGAGGATGAATTCAAGATCAGTGATGGATC...TGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS TCA 90 bp CTCCTTATTGCTCAGTTGGATTATCACAGTAACCTCCTGAACACATaGCTGTTAGGCCTCCACTCACTGTCATTTTCTCAAGGTACTTTC +
Preference number: 5 (lower is better)
Translates to: LLIAQLDYHSNLLNT*LLGLHSLSFSQGTF
Trigger: GAAAGTACCTTGAGAAAATGACAGTGAGTGGAGGCCTAACAGTCATGTGTTCAGGAGGTTACTGTGATAATCCAACTGAGCAATAAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467567.1
CDS GCA 90 bp AGAAGATTTAATATTGCCACCAAATTCGATCCTTTCAGGCTCCTGTaGCACTGGCTTCTCCATGCTACTTTTGGTATCTTTAGGATCTGC +
Preference number: 5 (lower is better)
Translates to: RRFNIATKFDPFRLL*HWLLHATFGIFRIC
Trigger: GCAGATCCTAAAGATACCAAAAGTAGCATGGAGAAGCCAGTGGCACAGGAGCCTGAAAGGATCGAATTTGGTGGCAATATTAAATCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308488.11
ENST00000480887.5
ENST00000526324.5
ENST00000528095.5
CDS CCA 90 bp AATTGGTACCAGTACATGAGGCCATCTTTGTCTCGACCAATTGGCTaGAGACGCATAGTATCGGCATCCTCCTCATTAATAATATTCTTG +
Preference number: 5 (lower is better)
Translates to: NWYQYMRPSLSRPIG*RRIVSASSSLIIFL
Trigger: CAAGAATATTATTAATGAGGAGGATGCCGATACTATGCGTCTCCAGCCAATTGGTCGAGACAAAGATGGCCTCATGTACTGGTACCAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308488.11
ENST00000440064.2
ENST00000528095.5
ENST00000534794.1
CDS CCA 90 bp ATCCAATTGGTACCAGTACATGAGGCCATCTTTGTCTCGACCAATTaGCTGGAGACGCATAGTATCGGCATCCTCCTCATTAATAATATT +
Preference number: 5 (lower is better)
Translates to: IQLVPVHEAIFVSTN*LETHSIGILLINNI
Trigger: AATATTATTAATGAGGAGGATGCCGATACTATGCGTCTCCAGCCAATTGGTCGAGACAAAGATGGCCTCATGTACTGGTACCAATTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308488.11
ENST00000440064.2
ENST00000528095.5
ENST00000534794.1
CDS CCA 90 bp TCCTCATCCTCTAAGCTGGGACTTTCCCGAGAAGAGTTGTCTTGTTaGCTAGAGTTTTTCAATAGTACAGGATCAATTTGTGCTTTCAGG +
Preference number: 5 (lower is better)
Translates to: SSSSKLGLSREELSC*LEFFNSTGSICAFR
Trigger: CCTGAAAGCACAAATTGATCCTGTACTATTGAAAAACTCTAGCCAACAAGACAACTCTTCTCGGGAAAGTCCCAGCTTAGAGGATGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308488.11
ENST00000440064.2
ENST00000526324.5
ENST00000528095.5
CDS CCA 90 bp TTTAATATTGCCACCAAATTCGATCCTTTCAGGCTCCTGTGCCACTaGCTTCTCCATGCTACTTTTGGTATCTTTAGGATCTGCTCTACA +
Preference number: 5 (lower is better)
Translates to: FNIATKFDPFRLLCH*LLHATFGIFRICST
Trigger: TGTAGAGCAGATCCTAAAGATACCAAAAGTAGCATGGAGAAGCCAGTGGCACAGGAGCCTGAAAGGATCGAATTTGGTGGCAATATTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308488.11
ENST00000480887.5
ENST00000526324.5
ENST00000528095.5
CDS-3UTR CAA 90 bp AAGTGCTTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGTCTCTAAGACTGATATaGAACTATCTGCATCTTTCC +
Preference number: 5 (lower is better)
Translates to: KCFHPPLNSVLGPHRFGMSLRLI*NYLHLS
Trigger: GGAAAGATGCAGATAGTTCAATATCAGTCTTAGAGA...CATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAAGCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CAA 90 bp GGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGTATTGGACTCAATCTTaGTGCGTCCTTATCAAGAAA +
Preference number: 5 (lower is better)
Translates to: GPSQIRNAFSSTLFHKVRYWTQS*CVLIKK
Trigger: TTTCTTGATAAGGACGCACAAAGATTGAGTCCAATA...CCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CAA 90 bp CTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGAGAGCGAACTTCTTCTGGTATaGGACTCAATCTTTGTGCGT +
Preference number: 5 (lower is better)
Translates to: LTDSECIFIHPFSQSQESELLLV*DSIFVR
Trigger: ACGCACAAAGATTGAGTCCAATACCAGAAGAAGTTC...GCTCTCCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CAA 90 bp TTGGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCACATCGAACTTTGCCTTaGGGTTTTACCTTGCTTACT +
Preference number: 5 (lower is better)
Translates to: LGPHRFGMHFHPPFFTKSHRTLP*GFTLLT
Trigger: AGTAAGCAAGGTAAAACCCAAAGGCAAAGTTCGATG...TGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS TCA 90 bp ACCCTTTCATCACTAACTTCTCCATTTACCAGCTGTTTCCCTTCATaGCCCAAAGCAGTGATTGTAGAGATCCTTTTACAAGTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: TLSSLTSPFTSCFPS*PKAVIVEILLQVSS
Trigger: GGAAGAGACTTGTAAAAGGATCTCTACAATCACTGCTTTGGGTCATGAAGGGAAACAGCTGGTAAATGGAGAAGTTAGTGATGAAAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308488.11
ENST00000480887.5
ENST00000526324.5
ENST00000528095.5
CDS CCA 90 bp GGCAGAAGATACCATATATGCAAAAATTCTGAGGAACGAAAAAGATaGCATGTTTCTGTATCAGTGGTCCTCAACCTTTCTGGCATCAGG +
Preference number: 5 (lower is better)
Translates to: GRRYHICKNSEERKR*HVSVSVVLNLSGIR
Trigger: CCTGATGCCAGAAAGGTTGAGGACCACTGATACAGAAACATGCCATCTTTTTCGTTCCTCAGAATTTTTGCATATATGGTATCTTCTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000467567.1
CDS-3UTR CAA 90 bp TTTCACCCACCCCTAAATTCTGTTTTGGGCCCTCACAGATTCGGAATGCATTTTATCGGGTTCCTCTATTaGTGCTTTTTGACTATGGAT +
Preference number: 5 (lower is better)
Translates to: FHPPLNSVLGPHRFGMHFIGFLY*CFLTMD
Trigger: ATCCATAGTCAAAAAGCACAAATAGAGGAACCCGAT...AAAATGCATTCCGAATCTGTGAGGGCCCAAAACAGAATTTAGGGGTGGGTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CAA 90 bp CTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGAGAGCATCCTGATTGTTAATTaGATGCCCTCTTTCTGCCTT +
Preference number: 5 (lower is better)
Translates to: LTDSECIFIHPFSQSQESILIVN*MPSFCL
Trigger: AAGGCAGAAAGAGGGCATCAAATTAACAATCAGGAT...GCTCTCCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CAA 90 bp CTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGAGAGCAAGTACGACCCACATTaGTTTTCTCCTCTTCCTTTT +
Preference number: 5 (lower is better)
Translates to: LTDSECIFIHPFSQSQESKYDPH*FSPLPF
Trigger: AAAAGGAAGAGGAGAAAACAAATGTGGGTCGTACTT...GCTCTCCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CAA 90 bp TTGGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCACACAACAAACTCATCTaGAGATCCATCACTGATCTT +
Preference number: 5 (lower is better)
Translates to: LGPHRFGMHFHPPFFTKSHNKLI*RSITDL
Trigger: AAGATCAGTGATGGATCTCAAGATGAGTTTGTTGTG...TGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS TCA 90 bp TCAAATGCATTACATTTGAATCAACTAGATGGCCCCATCTGGAAGTaGTGGGAGATAGTGACGGATCATCAGTCAGTAGATTCTCATAAG +
Preference number: 5 (lower is better)
Translates to: SNALHLNQLDGPIWK*WEIVTDHQSVDSHK
Trigger: CTTATGAGAATCTACTGACTGATGATCCGTCACTATCTCCCATCACTTCCAGATGGGGCCATCTAGTTGATTCAAATGTAATGCATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467567.1
CDS GCA 90 bp GAATGTACGTTAGCAAATGCAAGATACAGCACAATAACAAATGAATaGCCTTGGTTAAGCTCAGTTCCTAGACACCTCTCTCTCTTTCTC +
Preference number: 5 (lower is better)
Translates to: ECTLANARYSTITNE*PWLSSVPRHLSLFL
Trigger: GAGAAAGAGAGAGAGGTGTCTAGGAACTGAGCTTAACCAAGGGCATTCATTTGTTATTGTGCTGTATCTTGCATTTGCTAACGTACATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467567.1
CDS CCA 90 bp GAGATCTTTTGCCATCTCAGAAGAATCAAGAGAAGTTTCCATTTCTaGAGGATCGGGTTCCTCTATTTGTGCTTTTTGACTATGGATCTC +
Preference number: 5 (lower is better)
Translates to: EIFCHLRRIKRSFHF*RIGFLYLCFLTMDL
Trigger: GAGATCCATAGTCAAAAAGCACAAATAGAGGAACCCGATCCTCCAGAAATGGAAACTTCTCTTGATTCTTCTGAGATGGCAAAAGATCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308488.11
ENST00000480887.5
ENST00000526324.5
ENST00000528095.5
CDS CCA 90 bp AGTGTCACTGTCATCATTAGATGGCGGATCTTCTTCACTTTCATCTaGGTTTTCATCAGACACAACAAACTCATCTTGAGATCCATCACT +
Preference number: 5 (lower is better)
Translates to: SVTVIIRWRIFFTFI*VFIRHNKLILRSIT
Trigger: AGTGATGGATCTCAAGATGAGTTTGTTGTGTCTGATGAAAACCCAGATGAAAGTGAAGAAGATCCGCCATCTAATGATGACAGTGACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308488.11
ENST00000480887.5
ENST00000529470.1
ENST00000531026.5
CDS-3UTR CAA 90 bp CTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGAGAGCAGCTTATACATTTCCTaGTTCTTGTTGACCTCCTTT +
Preference number: 5 (lower is better)
Translates to: LTDSECIFIHPFSQSQESSLYIS*FLLTSF
Trigger: AAAGGAGGTCAACAAGAACAAGGAAATGTATAAGCT...GCTCTCCTGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS-3UTR CAA 90 bp TTGGGCCCTCACAGATTCGGAATGCATTTTCATCCACCCTTTTTCACAAAGTCAGGTGTTCTCAATGGATaGCAAATATTTATGCAGTTC +
Preference number: 5 (lower is better)
Translates to: LGPHRFGMHFHPPFFTKSGVLNG*QIFMQF
Trigger: GAACTGCATAAATATTTGCAATCCATTGAGAACACC...TGACTTTGTGAAAAAGGGTGGATGAAAATGCATTCCGAATCTGTGAGGGCCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480887.5
CDS TCA 90 bp ACACCTCTCTCTCTTTCTCTCTCACTATCAATTATCAATAGTTGTTaGTTTTACCTTCCAAATAGCTCTTACATCCACCCCCTCCTTTCC +
Preference number: 5 (lower is better)
Translates to: TPLSLSLSLSIINSC*FYLPNSSYIHPLLS
Trigger: GGAAAGGAGGGGGTGGATGTAAGAGCTATTTGGAAGGTAAAATCAACAACTATTGATAATTGATAGTGAGAGAGAAAGAGAGAGAGGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467567.1
CDS GCA 90 bp GCATTCAACACTCATTTCAAGATAGCCCTTCTTCTCCATCTCCCATaGCCAGGTACTGTTAAACTCTTGGCATATCTTGATCAAATATTT +
Preference number: 5 (lower is better)
Translates to: AFNTHFKIALLLHLP*PGTVKLLAYLDQIF
Trigger: AAATATTTGATCAAGATATGCCAAGAGTTTAACAGTACCTGGGCATGGGAGATGGAGAAGAAGGGCTATCTTGAAATGAGTGTTGAATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308488.11
ENST00000528095.5
ENST00000534794.1
CDS TCA 90 bp GAAGTTTCCATTTCTGGAGGATCGGGTTCCTCTATTTGTGCTTTTTaGCTATGGATCTCTAAGACTGATATTGAACTATCTGCATCTTTC +
Preference number: 5 (lower is better)
Translates to: EVSISGGSGSSICAF*LWISKTDIELSASF
Trigger: GAAAGATGCAGATAGTTCAATATCAGTCTTAGAGATCCATAGTCAAAAAGCACAAATAGAGGAACCCGATCCTCCAGAAATGGAAACTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308488.11
ENST00000480887.5
ENST00000526324.5
ENST00000528095.5
CDS TCA 90 bp CAGTATGCCAATCCTTGTTTTAGATGGATCCATTTATCCATACAGTaGGACAATTCTGCTCTCATATTCCCAAACAAAACATTAACACAC +
Preference number: 5 (lower is better)
Translates to: QYANPCFRWIHLSIQ*DNSALIFPNKTLTH
Trigger: GTGTGTTAATGTTTTGTTTGGGAATATGAGAGCAGAATTGTCTCACTGTATGGATAAATGGATCCATCTAAAACAAGGATTGGCATACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531768.1
CDS CCA 90 bp CTTTGTCTCATAAAACTTTGTCTCTATTGGTTCTGTCTTAAAATTTaGAGCTACCCTTTCATCACTAACTTCTCCATTTACCAGCTGTTT +
Preference number: 5 (lower is better)
Translates to: LCLIKLCLYWFCLKI*SYPFITNFSIYQLF
Trigger: AAACAGCTGGTAAATGGAGAAGTTAGTGATGAAAGGGTAGCTCCAAATTTTAAGACAGAACCAATAGAGACAAAGTTTTATGAGACAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308488.11
ENST00000480887.5
ENST00000526324.5
ENST00000528095.5
CDS CCA 72 bp CGTAGCGCTCCAAGAAGGAGCAGACTACGGCGAAGTTaGGGCACGAACCCGGGCAGCCCGGAGGAGCCATCA +
Preference number: 6 (lower is better)
Translates to: RSAPRRSRLRRS*GTNPGSPEEPS
Trigger: TGATGGCTCCTCCGGGCTGCCCGGGTTCGTGCCCCAACTTCGCCGTAGTCTGCTCCTTCTTGGAGCGCTACG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308488.11
ENST00000440064.2
ENST00000467567.1
ENST00000528095.5
ENST00000530604.1
CDS CCA 72 bp AAGGCAACCTTACAGACGACAGGAGGCGCTCTCAAGTaGGCTCCTCTGCGGATCCCAGCGTCTCAGGGACGG +
Preference number: 6 (lower is better)
Translates to: KATLQTTGGALK*APLRIPASQGR
Trigger: CCGTCCCTGAGACGCTGGGATCCGCAGAGGAGCCCACTTGAGAGCGCCTCCTGTCGTCTGTAAGGTTGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467567.1
CDS CAA 72 bp CCTCCTGCCCACCACTTGTCCCATTGGAGGCTAGGCTaGCACTGGCTGTGCTGTTGTCCTTGGGGGTCTGAG +
Preference number: 6 (lower is better)
Translates to: PPAHHLSHWRLG*HWLCCCPWGSE
Trigger: CTCAGACCCCCAAGGACAACAGCACAGCCAGTGCAAGCCTAGCCTCCAATGGGACAAGTGGTGGGCAGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308488.11
ENST00000480887.5
CDS CAA 90 bp GTGCTCCTGCCTCCTGCCCACCACTTGTCCCATTGGAGGCTAGGCTaGCACTGGCTGTGCTGTTGTCCTTGGGGGTCTGAGACTTCTCAG +
Preference number: 6 (lower is better)
Translates to: VLLPPAHHLSHWRLG*HWLCCCPWGSETSQ
Trigger: CTGAGAAGTCTCAGACCCCCAAGGACAACAGCACAGCCAGTGCAAGCCTAGCCTCCAATGGGACAAGTGGTGGGCAGGAGGCAGGAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308488.11
ENST00000480887.5
CDS TCA 72 bp TTCTATCCGGTAGGGCTTCTTGGTGCTCTCTTGTTCTaGGGGCAGGACCCTAGGCTGGCTGTCACGGGCAGG +
Preference number: 6 (lower is better)
Translates to: FYPVGLLGALLF*GQDPRLAVTGR
Trigger: CCTGCCCGTGACAGCCAGCCTAGGGTCCTGCCCTCAGAACAAGAGAGCACCAAGAAGCCCTACCGGATAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308488.11
ENST00000480887.5
CDS CCA 72 bp TGGGGTCTTTCTTCGCAAACGCCTGCTCTGCCTCATTaGCCGAGAGGGGTGTCGCCTCAGTCTACGGCTACA +
Preference number: 6 (lower is better)
Translates to: WGLSSQTPALPH*PRGVSPQSTAT
Trigger: TGTAGCCGTAGACTGAGGCGACACCCCTCTCGGCCAATGAGGCAGAGCAGGCGTTTGCGAAGAAAGACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308488.11
ENST00000480887.5
ENST00000529470.1
ENST00000531026.5
CDS CAA 72 bp TTGGGGTCTTTCTTCGCAAACGCCTGCTCTGCCTCATaGGCCGAGAGGGGTGTCGCCTCAGTCTACGGCTAC +
Preference number: 6 (lower is better)
Translates to: LGSFFANACSAS*AERGVASVYGY
Trigger: GTAGCCGTAGACTGAGGCGACACCCCTCTCGGCCAATGAGGCAGAGCAGGCGTTTGCGAAGAAAGACCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308488.11
ENST00000480887.5
ENST00000529470.1
ENST00000531026.5
CDS CCA 72 bp GCCCACCACTTGTCCCATTGGAGGCTAGGCTTGCACTaGCTGTGCTGTTGTCCTTGGGGGTCTGAGACTTCT +
Preference number: 6 (lower is better)
Translates to: AHHLSHWRLGLH*LCCCPWGSETS
Trigger: AGAAGTCTCAGACCCCCAAGGACAACAGCACAGCCAGTGCAAGCCTAGCCTCCAATGGGACAAGTGGTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308488.11
ENST00000480887.5
CDS CAA 90 bp TCCTCAACCTTTCTGGCATCAGGGACCAGTTTTGCGGAAGATAATTaGTCCACAGACTGGGGGTGGTGGGTGGGAGGGAGATGGTTTGGG +
Preference number: 6 (lower is better)
Translates to: SSTFLASGTSFAEDN*STDWGWWVGGRWFG
Trigger: CCCAAACCATCTCCCTCCCACCCACCACCCCCAGTCTGTGGACAAATTATCTTCCGCAAAACTGGTCCCTGATGCCAGAAAGGTTGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467567.1
CDS CAA 72 bp TTTCTGGCATCAGGGACCAGTTTTGCGGAAGATAATTaGTCCACAGACTGGGGGTGGTGGGTGGGAGGGAGA +
Preference number: 6 (lower is better)
Translates to: FLASGTSFAEDN*STDWGWWVGGR
Trigger: TCTCCCTCCCACCCACCACCCCCAGTCTGTGGACAAATTATCTTCCGCAAAACTGGTCCCTGATGCCAGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467567.1
CDS TCA 72 bp AGGCTTGCACTGGCTGTGCTGTTGTCCTTGGGGGTCTaGGACTTCTCAGTAGGCTTGCCAATCAAGTTCTCA +
Preference number: 6 (lower is better)
Translates to: RLALAVLLSLGV*DFSVGLPIKFS
Trigger: TGAGAACTTGATTGGCAAGCCTACTGAGAAGTCTCAGACCCCCAAGGACAACAGCACAGCCAGTGCAAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308488.11
ENST00000480887.5
CDS CAA 90 bp TTCTGTATCAGTGGTCCTCAACCTTTCTGGCATCAGGGACCAGTTTaGCGGAAGATAATTTGTCCACAGACTGGGGGTGGTGGGTGGGAG +
Preference number: 6 (lower is better)
Translates to: FCISGPQPFWHQGPV*RKIICPQTGGGGWE
Trigger: CTCCCACCCACCACCCCCAGTCTGTGGACAAATTATCTTCCGCAAAACTGGTCCCTGATGCCAGAAAGGTTGAGGACCACTGATACAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467567.1
CDS CAA 72 bp AGTGGTCCTCAACCTTTCTGGCATCAGGGACCAGTTTaGCGGAAGATAATTTGTCCACAGACTGGGGGTGGT +
Preference number: 6 (lower is better)
Translates to: SGPQPFWHQGPV*RKIICPQTGGG
Trigger: ACCACCCCCAGTCTGTGGACAAATTATCTTCCGCAAAACTGGTCCCTGATGCCAGAAAGGTTGAGGACCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467567.1
CDS CCA 72 bp GTACCAGTACATGAGGCCATCTTTGTCTCGACCAATTaGCTGGAGACGCATAGTATCGGCATCCTCCTCATT +
Preference number: 6 (lower is better)
Translates to: VPVHEAIFVSTN*LETHSIGILLI
Trigger: AATGAGGAGGATGCCGATACTATGCGTCTCCAGCCAATTGGTCGAGACAAAGATGGCCTCATGTACTGGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308488.11
ENST00000440064.2
ENST00000528095.5
ENST00000534794.1
CDS CAA 72 bp AGTTCTCAATGGCTTTGCCAGGGCTCTGTCCATTGGTaGAAGGTAAGTCCACTAAGCTATAGTCCAATGGGC +
Preference number: 6 (lower is better)
Translates to: SSQWLCQGSVHW*KVSPLSYSPMG
Trigger: GCCCATTGGACTATAGCTTAGTGGACTTACCTTCAACCAATGGACAGAGCCCTGGCAAAGCCATTGAGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308488.11
ENST00000480887.5
CDS CAA 72 bp TTCTCAGTAGGCTTGCCAATCAAGTTCTCAATGGCTTaGCCAGGGCTCTGTCCATTGGTTGAAGGTAAGTCC +
Preference number: 6 (lower is better)
Translates to: FSVGLPIKFSMA*PGLCPLVEGKS
Trigger: GGACTTACCTTCAACCAATGGACAGAGCCCTGGCAAAGCCATTGAGAACTTGATTGGCAAGCCTACTGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308488.11
ENST00000480887.5
CDS CAA 90 bp CAGCTGCCTCAGGAGAGCCAGGCTTTTCTGACTCTAGAGTACTCTTaGGAACTTCTTCTGGTATTGGACTCAATCTTTGTGCGTCCTTAT +
Preference number: 6 (lower is better)
Translates to: QLPQESQAFLTLEYS*ELLLVLDSIFVRPY
Trigger: ATAAGGACGCACAAAGATTGAGTCCAATACCAGAAGAAGTTCCAAAGAGTACTCTAGAGTCAGAAAAGCCTGGCTCTCCTGAGGCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308488.11
ENST00000480887.5
ENST00000526324.5
ENST00000528095.5
CDS CAA 90 bp GAACCCTTTGTCTCAGAAGGCTCCTCTATGCCAGAGGTCTGGGCATaGTCCAGATTATCCATTTCTACCTTTGTGAACTCAGAATCCTCT +
Preference number: 6 (lower is better)
Translates to: EPFVSEGSSMPEVWA*SRLSISTFVNSESS
Trigger: AGAGGATTCTGAGTTCACAAAGGTAGAAATGGATAATCTGGACAATGCCCAGACCTCTGGCATAGAGGAGCCTTCTGAGACAAAGGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308488.11
ENST00000480887.5
ENST00000526324.5
ENST00000528095.5
CDS CAA 90 bp GAAGCTGCAGATGATTTTTCACTGCCAGACCCTTCACTTTCATCATaGCTGGAATATTTCCATCTGCCACGTGTCCGAGAACCAGTCCAT +
Preference number: 6 (lower is better)
Translates to: EAADDFSLPDPSLSS*LEYFHLPRVREPVH
Trigger: ATGGACTGGTTCTCGGACACGTGGCAGATGGAAATATTCCAGCAATGATGAAAGTGAAGGGTCTGGCAGTGAAAAATCATCTGCAGCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308488.11
ENST00000480887.5
ENST00000526324.5
ENST00000531768.1
ENST00000532556.1
CDS CCA 72 bp CAGTACATGAGGCCATCTTTGTCTCGACCAATTGGCTaGAGACGCATAGTATCGGCATCCTCCTCATTAATA +
Preference number: 6 (lower is better)
Translates to: QYMRPSLSRPIG*RRIVSASSSLI
Trigger: TATTAATGAGGAGGATGCCGATACTATGCGTCTCCAGCCAATTGGTCGAGACAAAGATGGCCTCATGTACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308488.11
ENST00000440064.2
ENST00000528095.5
ENST00000534794.1
CDS CAA 72 bp GTCTCAGAAGGCTCCTCTATGCCAGAGGTCTGGGCATaGTCCAGATTATCCATTTCTACCTTTGTGAACTCA +
Preference number: 6 (lower is better)
Translates to: VSEGSSMPEVWA*SRLSISTFVNS
Trigger: TGAGTTCACAAAGGTAGAAATGGATAATCTGGACAATGCCCAGACCTCTGGCATAGAGGAGCCTTCTGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308488.11
ENST00000480887.5
ENST00000526324.5
ENST00000528095.5
CDS CAA 72 bp AGTCTGCTAAGTCTAGGCTTAGCAGGAAGGCTTAGGTaGGTAATGTCTGCTATGAGCAAAGCAACAAGGCCT +
Preference number: 6 (lower is better)
Translates to: SLLSLGLAGRLR*VMSAMSKATRP
Trigger: AGGCCTTGTTGCTTTGCTCATAGCAGACATTACCAACCTAAGCCTTCCTGCTAAGCCTAGACTTAGCAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467567.1
CDS CAA 90 bp CCATCACTGATCTTGAATTCATCCTCGCTCTCTTCTTCATCCAGGTaGCTATCACTGTCCAGATCATTTAATCGCCGGCGTTTCTTCCTT +
Preference number: 6 (lower is better)
Translates to: PSLILNSSSLSSSSR*LSLSRSFNRRRFFL
Trigger: AAGGAAGAAACGCCGGCGATTAAATGATCTGGACAGTGATAGCAACCTGGATGAAGAAGAGAGCGAGGATGAATTCAAGATCAGTGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308488.11
ENST00000480887.5
ENST00000529470.1
ENST00000531026.5
CDS CCA 72 bp TCAAGTTCTCAATGGCTTTGCCAGGGCTCTGTCCATTaGTTGAAGGTAAGTCCACTAAGCTATAGTCCAATG +
Preference number: 6 (lower is better)
Translates to: SSSQWLCQGSVH*LKVSPLSYSPM
Trigger: CATTGGACTATAGCTTAGTGGACTTACCTTCAACCAATGGACAGAGCCCTGGCAAAGCCATTGAGAACTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308488.11
ENST00000480887.5
CDS CAA 72 bp ATCTTGAATTCATCCTCGCTCTCTTCTTCATCCAGGTaGCTATCACTGTCCAGATCATTTAATCGCCGGCGT +
Preference number: 6 (lower is better)
Translates to: ILNSSSLSSSSR*LSLSRSFNRRR
Trigger: ACGCCGGCGATTAAATGATCTGGACAGTGATAGCAACCTGGATGAAGAAGAGAGCGAGGATGAATTCAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308488.11
ENST00000480887.5
ENST00000529470.1
ENST00000531026.5
CDS TCA 72 bp TCTTCATCCAAAATAGTAGAGATGTCTTTCCCACGATaGCCTGTGATGGTGGAGATATCTTTTCCTCGGCCA +
Preference number: 6 (lower is better)
Translates to: SSSKIVEMSFPR*PVMVEISFPRP
Trigger: TGGCCGAGGAAAAGATATCTCCACCATCACAGGTCATCGTGGGAAAGACATCTCTACTATTTTGGATGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308488.11
ENST00000480887.5
ENST00000529470.1
ENST00000531026.5
CDS TCA 72 bp GCTCAGTTGGATTATCACAGTAACCTCCTGAACACATaGCTGTTAGGCCTCCACTCACTGTCATTTTCTCAA +
Preference number: 6 (lower is better)
Translates to: AQLDYHSNLLNT*LLGLHSLSFSQ
Trigger: TTGAGAAAATGACAGTGAGTGGAGGCCTAACAGTCATGTGTTCAGGAGGTTACTGTGATAATCCAACTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467567.1
CDS GCA 72 bp AATATTGCCACCAAATTCGATCCTTTCAGGCTCCTGTaGCACTGGCTTCTCCATGCTACTTTTGGTATCTTT +
Preference number: 6 (lower is better)
Translates to: NIATKFDPFRLL*HWLLHATFGIF
Trigger: AAAGATACCAAAAGTAGCATGGAGAAGCCAGTGGCACAGGAGCCTGAAAGGATCGAATTTGGTGGCAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308488.11
ENST00000480887.5
ENST00000526324.5
ENST00000528095.5
CDS GCA 72 bp AGTCCACTAAGCTATAGTCCAATGGGCTCCCCACTTTaGCTACATTTTCAAAGTCCTCTTCCTCATCACTTT +
Preference number: 6 (lower is better)
Translates to: SPLSYSPMGSPL*LHFQSPLPHHF
Trigger: AAAGTGATGAGGAAGAGGACTTTGAAAATGTAGGCAAAGTGGGGAGCCCATTGGACTATAGCTTAGTGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308488.11
ENST00000480887.5
CDS CCA 72 bp ATGGCATGTTTCTGTATCAGTGGTCCTCAACCTTTCTaGCATCAGGGACCAGTTTTGCGGAAGATAATTTGT +
Preference number: 6 (lower is better)
Translates to: MACFCISGPQPF*HQGPVLRKIIC
Trigger: ACAAATTATCTTCCGCAAAACTGGTCCCTGATGCCAGAAAGGTTGAGGACCACTGATACAGAAACATGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467567.1
CDS CAA 72 bp TCCTCATCCTCTAAGCTGGGACTTTCCCGAGAAGAGTaGTCTTGTTGGCTAGAGTTTTTCAATAGTACAGGA +
Preference number: 6 (lower is better)
Translates to: SSSSKLGLSREE*SCWLEFFNSTG
Trigger: TCCTGTACTATTGAAAAACTCTAGCCAACAAGACAACTCTTCTCGGGAAAGTCCCAGCTTAGAGGATGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308488.11
ENST00000440064.2
ENST00000526324.5
ENST00000528095.5
CDS CAA 72 bp GATGATTTTTCACTGCCAGACCCTTCACTTTCATCATaGCTGGAATATTTCCATCTGCCACGTGTCCGAGAA +
Preference number: 6 (lower is better)
Translates to: DDFSLPDPSLSS*LEYFHLPRVRE
Trigger: TTCTCGGACACGTGGCAGATGGAAATATTCCAGCAATGATGAAAGTGAAGGGTCTGGCAGTGAAAAATCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000308488.11
ENST00000480887.5
ENST00000526324.5
ENST00000531768.1
ENST00000532556.1
CDS CAA 72 bp TCTTTTCCTCGGCCAACTCCTCCTCCATCGGCTTCTTaGATGTCATCTTCAATAGCTTCATCAATTGCTTCA +
Preference number: 6 (lower is better)
Translates to: SFPRPTPPPSAS*MSSSIASSIAS
Trigger: TGAAGCAATTGATGAAGCTATTGAAGATGACATCAAAGAAGCCGATGGAGGAGGAGTTGGCCGAGGAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308488.11
ENST00000480887.5
ENST00000531026.5
CDS TCA 72 bp TTACATTTGAATCAACTAGATGGCCCCATCTGGAAGTaGTGGGAGATAGTGACGGATCATCAGTCAGTAGAT +
Preference number: 6 (lower is better)
Translates to: LHLNQLDGPIWK*WEIVTDHQSVD
Trigger: ATCTACTGACTGATGATCCGTCACTATCTCCCATCACTTCCAGATGGGGCCATCTAGTTGATTCAAATGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467567.1
CDS GCA 72 bp ACTCATTTCAAGATAGCCCTTCTTCTCCATCTCCCATaGCCAGGTACTGTTAAACTCTTGGCATATCTTGAT +
Preference number: 6 (lower is better)
Translates to: THFKIALLLHLP*PGTVKLLAYLD
Trigger: ATCAAGATATGCCAAGAGTTTAACAGTACCTGGGCATGGGAGATGGAGAAGAAGGGCTATCTTGAAATGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308488.11
ENST00000528095.5
ENST00000534794.1
CDS CCA 72 bp AGTTCTTGGACAAATAGCTCTCTTCACTCTCTGAGCTaGAAAGTCTTCGCTTGTGTACTCGCCTTATTTCTT +
Preference number: 6 (lower is better)
Translates to: SSWTNSSLHSLS*KVFACVLALFL
Trigger: AAGAAATAAGGCGAGTACACAAGCGAAGACTTTCCAGCTCAGAGAGTGAAGAGAGCTATTTGTCCAAGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308488.11
ENST00000480887.5
CDS GCA 72 bp TGGTGGGAAGGTACTCCAGGCAGAAGATACCATATATaGAAAAATTCTGAGGAACGAAAAAGATGGCATGTT +
Preference number: 6 (lower is better)
Translates to: WWEGTPGRRYHI*KNSEERKRWHV
Trigger: AACATGCCATCTTTTTCGTTCCTCAGAATTTTTGCATATATGGTATCTTCTGCCTGGAGTACCTTCCCACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000467567.1
CDS CCA 72 bp TGCCATCTCAGAAGAATCAAGAGAAGTTTCCATTTCTaGAGGATCGGGTTCCTCTATTTGTGCTTTTTGACT +
Preference number: 6 (lower is better)
Translates to: CHLRRIKRSFHF*RIGFLYLCFLT
Trigger: AGTCAAAAAGCACAAATAGAGGAACCCGATCCTCCAGAAATGGAAACTTCTCTTGATTCTTCTGAGATGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308488.11
ENST00000480887.5
ENST00000526324.5
ENST00000528095.5
CDS CCA 72 bp GAGACTTCTCTTCACCTTTCATGGTACACGACTCGGTaGAAGATAAAGCAGTTTTTGAAGAGAGATCTTTTG +
Preference number: 6 (lower is better)
Translates to: ETSLHLSWYTTR*KIKQFLKRDLL
Trigger: CAAAAGATCTCTCTTCAAAAACTGCTTTATCTTCCACCGAGTCGTGTACCATGAAAGGTGAAGAGAAGTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308488.11
ENST00000480887.5
ENST00000526324.5
ENST00000528095.5
CDS CAA 72 bp TTCTATGTACATTCTGACATTGTGATCTTGATCCAATaGGTACCAGTACATGAGGCCATCTTTGTCTCGACC +
Preference number: 6 (lower is better)
Translates to: FYVHSDIVILIQ*VPVHEAIFVST
Trigger: GGTCGAGACAAAGATGGCCTCATGTACTGGTACCAATTGGATCAAGATCACAATGTCAGAATGTACATAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308488.11
ENST00000440064.2
ENST00000528095.5
ENST00000534794.1
CDS CAA 90 bp ATCTTGTTCTTCTATGTACATTCTGACATTGTGATCTTGATCCAATaGGTACCAGTACATGAGGCCATCTTTGTCTCGACCAATTGGCTG +
Preference number: 6 (lower is better)
Translates to: ILFFYVHSDIVILIQ*VPVHEAIFVSTNWL
Trigger: CAGCCAATTGGTCGAGACAAAGATGGCCTCATGTACTGGTACCAATTGGATCAAGATCACAATGTCAGAATGTACATAGAAGAACAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308488.11
ENST00000440064.2
ENST00000528095.5
ENST00000534794.1
CDS CAA 90 bp ATCTTGATCATCTTGTTCTTCTATGTACATTCTGACATTGTGATCTaGATCCAATTGGTACCAGTACATGAGGCCATCTTTGTCTCGACC +
Preference number: 6 (lower is better)
Translates to: ILIILFFYVHSDIVI*IQLVPVHEAIFVST
Trigger: GGTCGAGACAAAGATGGCCTCATGTACTGGTACCAATTGGATCAAGATCACAATGTCAGAATGTACATAGAAGAACAAGATGATCAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308488.11
ENST00000440064.2
ENST00000528095.5
ENST00000534794.1
CDS CAA 90 bp TTTTTAGTCTCCTCATCCTCTAAGCTGGGACTTTCCCGAGAAGAGTaGTCTTGTTGGCTAGAGTTTTTCAATAGTACAGGATCAATTTGT +
Preference number: 6 (lower is better)
Translates to: FLVSSSSKLGLSREE*SCWLEFFNSTGSIC
Trigger: ACAAATTGATCCTGTACTATTGAAAAACTCTAGCCAACAAGACAACTCTTCTCGGGAAAGTCCCAGCTTAGAGGATGAGGAGACTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000308488.11
ENST00000526324.5
ENST00000528095.5
CDS CAA 90 bp CTTCACCTTTCATGGTACACGACTCGGTGGAAGATAAAGCAGTTTTaGAAGAGAGATCTTTTGCCATCTCAGAAGAATCAAGAGAAGTTT +
Preference number: 6 (lower is better)
Translates to: LHLSWYTTRWKIKQF*KRDLLPSQKNQEKF
Trigger: AAACTTCTCTTGATTCTTCTGAGATGGCAAAAGATCTCTCTTCAAAAACTGCTTTATCTTCCACCGAGTCGTGTACCATGAAAGGTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308488.11
ENST00000480887.5
ENST00000526324.5
ENST00000528095.5
CDS CAA 90 bp GGAGAATCGGGCTTCTTTTTCCGACTTGATATCCTGATTGTTAATTaGATGCCCTCTTTCTGCCTTTCAGAGGTTATCTCTGTATTTTCT +
Preference number: 6 (lower is better)
Translates to: GESGFFFRLDILIVN*MPSFCLSEVISVFS
Trigger: AGAAAATACAGAGATAACCTCTGAAAGGCAGAAAGAGGGCATCAAATTAACAATCAGGATATCAAGTCGGAAAAAGAAGCCCGATTCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308488.11
ENST00000480887.5
ENST00000526324.5
CDS CAA 90 bp TTCATCAGTGATATTTTAAAGTACTGGATTCACCAAGTCCTGGATTaGAATGCTGGCTCTGTCGTTTTTAGCAATGTGAGACCAGACAAG +
Preference number: 6 (lower is better)
Translates to: FISDILKYWIHQVLD*NAGSVVFSNVRPDK
Trigger: CTTGTCTGGTCTCACATTGCTAAAAACGACAGAGCCAGCATTCAAATCCAGGACTTGGTGAATCCAGTACTTTAAAATATCACTGATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467567.1
CDS TCA 72 bp TCACTAACTTCTCCATTTACCAGCTGTTTCCCTTCATaGCCCAAAGCAGTGATTGTAGAGATCCTTTTACAA +
Preference number: 6 (lower is better)
Translates to: SLTSPFTSCFPS*PKAVIVEILLQ
Trigger: TTGTAAAAGGATCTCTACAATCACTGCTTTGGGTCATGAAGGGAAACAGCTGGTAAATGGAGAAGTTAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308488.11
ENST00000480887.5
ENST00000526324.5
ENST00000528095.5
CDS GCA 72 bp TTAGCAAATGCAAGATACAGCACAATAACAAATGAATaGCCTTGGTTAAGCTCAGTTCCTAGACACCTCTCT +
Preference number: 6 (lower is better)
Translates to: LANARYSTITNE*PWLSSVPRHLS
Trigger: AGAGAGGTGTCTAGGAACTGAGCTTAACCAAGGGCATTCATTTGTTATTGTGCTGTATCTTGCATTTGCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467567.1
CDS CCA 72 bp TCTAAGCTGGGACTTTCCCGAGAAGAGTTGTCTTGTTaGCTAGAGTTTTTCAATAGTACAGGATCAATTTGT +
Preference number: 6 (lower is better)
Translates to: SKLGLSREELSC*LEFFNSTGSIC
Trigger: ACAAATTGATCCTGTACTATTGAAAAACTCTAGCCAACAAGACAACTCTTCTCGGGAAAGTCCCAGCTTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308488.11
ENST00000440064.2
ENST00000526324.5
ENST00000528095.5
CDS CCA 72 bp TCTACCACTTCTTTTTCTGAGGCTAGTTTCTCACAGTaGTCAATGATATTAGATGGTGGAGAAGTTTCAGCT +
Preference number: 6 (lower is better)
Translates to: STTSFSEASFSQ*SMILDGGEVSA
Trigger: AGCTGAAACTTCTCCACCATCTAATATCATTGACCACTGTGAGAAACTAGCCTCAGAAAAAGAAGTGGTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308488.11
ENST00000480887.5
ENST00000526324.5
ENST00000528095.5
CDS CCA 72 bp GTCATCATTAGATGGCGGATCTTCTTCACTTTCATCTaGGTTTTCATCAGACACAACAAACTCATCTTGAGA +
Preference number: 6 (lower is better)
Translates to: VIIRWRIFFTFI*VFIRHNKLILR
Trigger: TCTCAAGATGAGTTTGTTGTGTCTGATGAAAACCCAGATGAAAGTGAAGAAGATCCGCCATCTAATGATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308488.11
ENST00000480887.5
ENST00000529470.1
ENST00000531026.5
CDS CAA 72 bp CTGACTCTAGAGTACTCTTTGGAACTTCTTCTGGTATaGGACTCAATCTTTGTGCGTCCTTATCAAGAAAAG +
Preference number: 6 (lower is better)
Translates to: LTLEYSLELLLV*DSIFVRPYQEK
Trigger: CTTTTCTTGATAAGGACGCACAAAGATTGAGTCCAATACCAGAAGAAGTTCCAAAGAGTACTCTAGAGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308488.11
ENST00000480887.5
ENST00000526324.5
ENST00000528095.5
CDS CAA 72 bp GGCTTCTTTTTCCGACTTGATATCCTGATTGTTAATTaGATGCCCTCTTTCTGCCTTTCAGAGGTTATCTCT +
Preference number: 6 (lower is better)
Translates to: GFFFRLDILIVN*MPSFCLSEVIS
Trigger: AGAGATAACCTCTGAAAGGCAGAAAGAGGGCATCAAATTAACAATCAGGATATCAAGTCGGAAAAAGAAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308488.11
ENST00000480887.5
ENST00000526324.5
CDS TCA 72 bp GGAAAAGAAACAGCTTTCAGTAATACATATGTACAATaGTGCCACAAGGAGAAAGACGAGAGCACTGTAAGA +
Preference number: 6 (lower is better)
Translates to: GKETAFSNTYVQ*CHKEKDESTVR
Trigger: TCTTACAGTGCTCTCGTCTTTCTCCTTGTGGCATCATTGTACATATGTATTACTGAAAGCTGTTTCTTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467567.1
CDS TCA 72 bp GTTCCTCTGACAATGCATTTCCATGAAGAGCCATCTTaGTCATCTTGTTCTTCTATGTACATTCTGACATTG +
Preference number: 6 (lower is better)
Translates to: VPLTMHFHEEPS*SSCSSMYILTL
Trigger: CAATGTCAGAATGTACATAGAAGAACAAGATGATCAAGATGGCTCTTCATGGAAATGCATTGTCAGAGGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534794.1
CDS CAA 72 bp GATATTTTAAAGTACTGGATTCACCAAGTCCTGGATTaGAATGCTGGCTCTGTCGTTTTTAGCAATGTGAGA +
Preference number: 6 (lower is better)
Translates to: DILKYWIHQVLD*NAGSVVFSNVR
Trigger: TCTCACATTGCTAAAAACGACAGAGCCAGCATTCAAATCCAGGACTTGGTGAATCCAGTACTTTAAAATATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467567.1
CDS TCA 72 bp AGCCATCTTGATCATCTTGTTCTTCTATGTACATTCTaGCATTGTGATCTTGATCCAATTGGTACCAGTACA +
Preference number: 6 (lower is better)
Translates to: SHLDHLVLLCTF*HCDLDPIGTST
Trigger: TGTACTGGTACCAATTGGATCAAGATCACAATGTCAGAATGTACATAGAAGAACAAGATGATCAAGATGGCT
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308488.11
ENST00000440064.2
ENST00000528095.5
ENST00000534794.1
CDS TCA 72 bp ATTTCTGGAGGATCGGGTTCCTCTATTTGTGCTTTTTaGCTATGGATCTCTAAGACTGATATTGAACTATCT +
Preference number: 6 (lower is better)
Translates to: ISGGSGSSICAF*LWISKTDIELS
Trigger: AGATAGTTCAATATCAGTCTTAGAGATCCATAGTCAAAAAGCACAAATAGAGGAACCCGATCCTCCAGAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308488.11
ENST00000480887.5
ENST00000526324.5
ENST00000528095.5
CDS CCA 72 bp TACCATATATGCAAAAATTCTGAGGAACGAAAAAGATaGCATGTTTCTGTATCAGTGGTCCTCAACCTTTCT +
Preference number: 6 (lower is better)
Translates to: YHICKNSEERKR*HVSVSVVLNLS
Trigger: AGAAAGGTTGAGGACCACTGATACAGAAACATGCCATCTTTTTCGTTCCTCAGAATTTTTGCATATATGGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000467567.1
CDS CAA 72 bp ATCTTGTTCTTCTATGTACATTCTGACATTGTGATCTaGATCCAATTGGTACCAGTACATGAGGCCATCTTT +
Preference number: 6 (lower is better)
Translates to: ILFFYVHSDIVI*IQLVPVHEAIF
Trigger: AAAGATGGCCTCATGTACTGGTACCAATTGGATCAAGATCACAATGTCAGAATGTACATAGAAGAACAAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308488.11
ENST00000440064.2
ENST00000528095.5
ENST00000534794.1
CDS CAA 72 bp TTTGTGCTTTTTGACTATGGATCTCTAAGACTGATATaGAACTATCTGCATCTTTCCTCAAAGGGGCTGTTT +
Preference number: 6 (lower is better)
Translates to: FVLFDYGSLRLI*NYLHLSSKGLF
Trigger: AAACAGCCCCTTTGAGGAAAGATGCAGATAGTTCAATATCAGTCTTAGAGATCCATAGTCAAAAAGCACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308488.11
ENST00000480887.5
ENST00000526324.5
ENST00000528095.5
CDS CAA 72 bp ACTCTTTGGAACTTCTTCTGGTATTGGACTCAATCTTaGTGCGTCCTTATCAAGAAAAGTCTTTTTGGACTT +
Preference number: 6 (lower is better)
Translates to: TLWNFFWYWTQS*CVLIKKSLFGL
Trigger: AAGTCCAAAAAGACTTTTCTTGATAAGGACGCACAAAGATTGAGTCCAATACCAGAAGAAGTTCCAAAGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308488.11
ENST00000480887.5
ENST00000526324.5
ENST00000528095.5
CDS CAA 72 bp ACTCATCAAATCTGTAGCTTATACATTTCCTTGTTCTaGTTGACCTCCTTTCAAGCAAGTTTGCTTTGGATT +
Preference number: 6 (lower is better)
Translates to: THQICSLYISLF*LTSFQASLLWI
Trigger: AATCCAAAGCAAACTTGCTTGAAAGGAGGTCAACAAGAACAAGGAAATGTATAAGCTACAGATTTGATGAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308488.11
ENST00000480887.5
ENST00000531026.5
CDS CAA 72 bp CATCAAACTCATCAAATCTGTAGCTTATACATTTCCTaGTTCTTGTTGACCTCCTTTCAAGCAAGTTTGCTT +
Preference number: 6 (lower is better)
Translates to: HQTHQICSLYIS*FLLTSFQASLL
Trigger: AAGCAAACTTGCTTGAAAGGAGGTCAACAAGAACAAGGAAATGTATAAGCTACAGATTTGATGAGTTTGATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308488.11
ENST00000480887.5
ENST00000531026.5
CDS TCA 72 bp AATCCTTGTTTTAGATGGATCCATTTATCCATACAGTaGGACAATTCTGCTCTCATATTCCCAAACAAAACA +
Preference number: 6 (lower is better)
Translates to: NPCFRWIHLSIQ*DNSALIFPNKT
Trigger: TGTTTTGTTTGGGAATATGAGAGCAGAATTGTCTCACTGTATGGATAAATGGATCCATCTAAAACAAGGATT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531768.1