RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RSBN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000081019

Ensembl transcript IDs: ENST00000261441.9, ENST00000369581.2, ENST00000476412.5, ENST00000612242.4, ENST00000615321.1, ENST00000616024.4

Found 451 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTCTTCATCTACTGCTCCAACGAGACTTATCTGCCGCATAGGACCTaGTCGGTAGGTGCCACAGCAGTATGTCCTGTTGACCTGGTTGTG +
Preference number: 1 (lower is better)
Translates to: FFIYCSNETYLPHRT*SVGATAVCPVDLVV
Trigger: CACAACCAGGTCAACAGGACATACTGCTGTGGCACCTACCGAGCAGGTCCTATGCGGCAGATAAGTCTCGTTGGAGCAGTAGATGAAGAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476412.5
3UTR CCA 90 bp AAATCCAAGACGAAGCCCTTTATTGCACATGGTGTTCCAACATCTTaGGCAGCCCCATCTTGCGACCTCTCCACATTGGCTGCTCCTGCT +
Preference number: 1 (lower is better)
Translates to: KSKTKPFIAHGVPTS*AAPSCDLSTLAAPA
Trigger: AGCAGGAGCAGCCAATGTGGAGAGGTCGCAAGATGGGGCTGCCCAAGATGTTGGAACACCATGTGCAATAAAGGGCTTCGTCTTGGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476412.5
3UTR CCA 90 bp GGCCTTACCCACATTATAGGCCCATCATCACTCTGGGACCTACACTaGAGTCGGAGGCTAGAAAGTGTACCCCAGGGCAAAGTCATTTTC +
Preference number: 1 (lower is better)
Translates to: GLTHIIGPSSLWDLH*SRRLESVPQGKVIF
Trigger: GAAAATGACTTTGCCCTGGGGTACACTTTCTAGCCTCCGACTCCAGTGTAGGTCCCAGAGTGATGATGGGCCTATAATGTGGGTAAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476412.5
3UTR GCA 90 bp CCTGGTTGTGGTAATAAGGCCAAAATCCAAGACGAAGCCCTTTATTaGACATGGTGTTCCAACATCTTGGGCAGCCCCATCTTGCGACCT +
Preference number: 1 (lower is better)
Translates to: PGCGNKAKIQDEALY*TWCSNILGSPILRP
Trigger: AGGTCGCAAGATGGGGCTGCCCAAGATGTTGGAACACCATGTGCAATAAAGGGCTTCGTCTTGGATTTTGGCCTTATTACCACAACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476412.5
3UTR CCA 90 bp TGTGGTAATAAGGCCAAAATCCAAGACGAAGCCCTTTATTGCACATaGTGTTCCAACATCTTGGGCAGCCCCATCTTGCGACCTCTCCAC +
Preference number: 1 (lower is better)
Translates to: CGNKAKIQDEALYCT*CSNILGSPILRPLH
Trigger: GTGGAGAGGTCGCAAGATGGGGCTGCCCAAGATGTTGGAACACCATGTGCAATAAAGGGCTTCGTCTTGGATTTTGGCCTTATTACCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476412.5
3UTR TCA 90 bp AGTTCTGATGCAGGTGGGAAAGATGATGAAGCAGTTGTTAACAGCTaGATCTCTGTGCATGCTTCTTCAGATTCAGTTTTTATCCTCACA +
Preference number: 1 (lower is better)
Translates to: SSDAGGKDDEAVVNS*ISVHASSDSVFILT
Trigger: TGTGAGGATAAAAACTGAATCTGAAGAAGCATGCACAGAGATTCAGCTGTTAACAACTGCTTCATCATCTTTCCCACCTGCATCAGAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476412.5
3UTR CCA 90 bp ATCTCTGTGCATGCTTCTTCAGATTCAGTTTTTATCCTCACACATTaGGAGTCAACTTCTAATTCTCGCTTTCCAGTTAAACCACAGTCC +
Preference number: 1 (lower is better)
Translates to: ISVHASSDSVFILTH*ESTSNSRFPVKPQS
Trigger: GGACTGTGGTTTAACTGGAAAGCGAGAATTAGAAGTTGACTCCCAATGTGTGAGGATAAAAACTGAATCTGAAGAAGCATGCACAGAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476412.5
3UTR CCA 90 bp ACATATCACACAGAAGTGGTTGAATGTTCTTGCAGATTGTGTTGCTaGTCAGAGTCCAGTCTACTTTCCACTTTTAAAACTGGAATAGGC +
Preference number: 1 (lower is better)
Translates to: TYHTEVVECSCRLCC*SESSLLSTFKTGIG
Trigger: GCCTATTCCAGTTTTAAAAGTGGAAAGTAGACTGGACTCTGACCAGCAACACAATCTGCAAGAACATTCAACCACTTCTGTGTGATATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476412.5
3UTR GCA 90 bp TGTACATATCACACAGAAGTGGTTGAATGTTCTTGCAGATTGTGTTaGTGGTCAGAGTCCAGTCTACTTTCCACTTTTAAAACTGGAATA +
Preference number: 1 (lower is better)
Translates to: CTYHTEVVECSCRLC*WSESSLLSTFKTGI
Trigger: TATTCCAGTTTTAAAAGTGGAAAGTAGACTGGACTCTGACCAGCAACACAATCTGCAAGAACATTCAACCACTTCTGTGTGATATGTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476412.5
3UTR TCA 90 bp GCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGTAGAAATTaGACCTGTGCCATAAAGACACAAGTACTAAACCATAAATCTTAT +
Preference number: 1 (lower is better)
Translates to: AEILSCNLCHFHCRN*TCAIKTQVLNHKSY
Trigger: ATAAGATTTATGGTTTAGTACTTGTGTCTTTATGGCACAGGTTCAATTTCTACAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
3UTR-3UTR GCA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGCTGCCGCATAGGACCTaGTCGGTAGGTGCCACAGCA +
Preference number: 2 (lower is better)
Translates to: HLKTESSSRPTITYCTNGLPHRT*SVGATA
Trigger: TGCTGTGGCACCTACCGAGCAGGTCCTATGCGGCAG...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476412.5
3UTR-3UTR CCA 90 bp TATCACACAGAAGTGGTTGAATGTTCTTGCAGATTGTGTTGCTGGTCAGAGTCCGGCCCATCATCACTCTaGGACCTACACTGGAGTCGG +
Preference number: 2 (lower is better)
Translates to: YHTEVVECSCRLCCWSESGPSSL*DLHWSR
Trigger: CCGACTCCAGTGTAGGTCCCAGAGTGATGATGGGCC...GGACTCTGACCAGCAACACAATCTGCAAGAACATTCAACCACTTCTGTGTGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476412.5
3UTR-3UTR TCA 90 bp AGCTTGGATGACAGATGGCATCTGCTGGATGGCAAGTGGGAGATGGGGAAATCGAAACCAGAGAGCCACTaGAATTTCCTTGGAAACTAC +
Preference number: 2 (lower is better)
Translates to: SLDDRWHLLDGKWEMGKSKPESH*NFLGNY
Trigger: GTAGTTTCCAAGGAAATTTCAGTGGCTCTCTGGTTT...CGATTTCCCCATCTCCCACTTGCCATCCAGCAGATGCCATCTGTCATCCAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
3UTR-3UTR GCA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGCCAACGAGACTTATCTaGCGCATAGGACCTGCTCGG +
Preference number: 2 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLPTRLI*RIGPAR
Trigger: CCGAGCAGGTCCTATGCGGCAGATAAGTCTCGTTGG...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476412.5
3UTR-3UTR GCA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGTGGGCAGCCCCATCTTaGGACCTCTCCACATTGGCT +
Preference number: 2 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTWAAPS*DLSTLA
Trigger: AGCCAATGTGGAGAGGTCGCAAGATGGGGCTGCCCA...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476412.5
3UTR-3UTR CCA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGTGTTCCAACATCTTaGGCAGCCCCATCTTGCGAC +
Preference number: 2 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTGVPTS*AAPSCD
Trigger: GTCGCAAGATGGGGCTGCCCAAGATGTTGGAACACC...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476412.5
3UTR-3UTR GCA 90 bp TTTCCCCCTACAAGAGCTTGTAATATTAGTCAACTGGTATTCCAACTGTCTCTTCAGAAGACGCCAGATTaGTCCATGCCTCACTCCACC +
Preference number: 2 (lower is better)
Translates to: FPPTRACNISQLVFQLSLQKTPD*SMPHST
Trigger: GGTGGAGTGAGGCATGGAGCAATCTGGCGTCTTCTG...AAGAGACAGTTGGAATACCAGTTGACTAATATTACAAGCTCTTGTAGGGGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
3UTR-3UTR CCA 90 bp TATCACACAGAAGTGGTTGAATGTTCTTGCAGATTGTGTTGCTGGTCAGAGTCCGCCCTTTATTGCACATaGTGTTCCAACATCTTGGGC +
Preference number: 2 (lower is better)
Translates to: YHTEVVECSCRLCCWSESALYCT*CSNILG
Trigger: GCCCAAGATGTTGGAACACCATGTGCAATAAAGGGC...GGACTCTGACCAGCAACACAATCTGCAAGAACATTCAACCACTTCTGTGTGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476412.5
3UTR-3UTR CCA 90 bp TTTCCCCCTACAAGAGCTTGTAATATTAGTCAACTGGTATTCCAACTGTCTCTTATGGCATCTGCTGGATaGCAAGTGGGAGATGGGGAA +
Preference number: 2 (lower is better)
Translates to: FPPTRACNISQLVFQLSLMASAG*QVGDGE
Trigger: TTCCCCATCTCCCACTTGCCATCCAGCAGATGCCAT...AAGAGACAGTTGGAATACCAGTTGACTAATATTACAAGCTCTTGTAGGGGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
3UTR-3UTR CCA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGTTTCTGTGTTTTGAGTaGCTTCCACAACAGGGTGGT +
Preference number: 2 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLFLCFE*LPQQGG
Trigger: ACCACCCTGTTGTGGAAGCCACTCAAAACACAGAAA...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476412.5
3UTR-3UTR TCA 90 bp TCACTGCAGTATTTGCTGATGGTTACTTTTCTATCGGTTTACACAGTGACCTCTTATCCCCACAAAATGTaGGGATGCCAGGAAGCAGAA +
Preference number: 2 (lower is better)
Translates to: SLQYLLMVTFLSVYTVTSYPHKM*GCQEAE
Trigger: TTCTGCTTCCTGGCATCCTCACATTTTGTGGGGATA...AGAGGTCACTGTGTAAACCGATAGAAAAGTAACCATCAGCAAATACTGCAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
3UTR-3UTR TCA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTGCAGTTGTTAACAGCTaGATCTCTGTGCATGCTTCT +
Preference number: 2 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFAVVNS*ISVHAS
Trigger: AGAAGCATGCACAGAGATTCAGCTGTTAACAACTGC...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476412.5
3UTR-3UTR GCA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGTGCCCATGTACCAGATaGAGAAATTCTTTCCTGCAA +
Preference number: 2 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLCPCTR*RNSFLQ
Trigger: TTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
3UTR-3UTR GCA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGGACGAAGCCCTTTATTaGACATGGTGTTCCAACATC +
Preference number: 2 (lower is better)
Translates to: HLKTESSSRPTITYCTNGDEALY*TWCSNI
Trigger: GATGTTGGAACACCATGTGCAATAAAGGGCTTCGTC...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476412.5
3UTR-3UTR GCA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTGTTTAAGCCTTATATaGCAGGCTAAGCTGCACACC +
Preference number: 2 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFCLSLI*QAKLHT
Trigger: GGTGTGCAGCTTAGCCTGGCATATAAGGCTTAAACA...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476412.5
3UTR-3UTR CCA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGTTGGTTATGCGAGGTTaGTCACTCCATTCACCAAAT +
Preference number: 2 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLLVMRG*SLHSPN
Trigger: ATTTGGTGAATGGAGTGACCAACCTCGCATAACCAA...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476412.5
3UTR-3UTR CCA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGGCTTCCACAACAGGGTaGTACTGTTTAAGCCTTATA +
Preference number: 2 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLASTTG*YCLSLI
Trigger: TATAAGGCTTAAACAGTACCACCCTGTTGTGGAAGC...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476412.5
3UTR CAA 90 bp GCATTTCCTCTACTTGCATGGCCAATAAATACAGCTACGACCTGTTaGAAAAACAAAACAGATGTGAACCTCTGGCATGTGCTAGCTAGT +
Preference number: 2 (lower is better)
Translates to: AFPLLAWPINTATTC*KNKTDVNLWHVLAS
Trigger: ACTAGCTAGCACATGCCAGAGGTTCACATCTGTTTTGTTTTTCAAACAGGTCGTAGCTGTATTTATTGGCCATGCAAGTAGAGGAAATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
3UTR-3UTR TCA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTCCTGAAACTCTAGGATaGAGTCTAGTGCTGTATTCT +
Preference number: 2 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFPETLG*SLVLYS
Trigger: AGAATACAGCACTAGACTTCATCCTAGAGTTTCAGG...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
3UTR-3UTR TCA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTCACTGCAGTATTTGCTaGTGGTTACTTTTCTATCGG +
Preference number: 2 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFHCSIC*WLLFYR
Trigger: CCGATAGAAAAGTAACCATCAGCAAATACTGCAGTG...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
3UTR-3UTR TCA 90 bp ACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCATTGATCGTCGTCTTTTaGAGGGTGACTTTGGCATAT +
Preference number: 2 (lower is better)
Translates to: TCPCTRCRNSFLQPMPFSLIVVF*RVTLAY
Trigger: ATATGCCAAAGTCACCCTTCAAAAGACGACGATCAA...TGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476412.5
3UTR-3UTR GCA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGGCAGAAATTCTTTCCTaGAACCTATGCCATTTTCAC +
Preference number: 2 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLAEILS*NLCHFH
Trigger: GTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGC...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
3UTR-3UTR CCA 90 bp TTTCCCCCTACAAGAGCTTGTAATATTAGTCAACTGGTATTCCAACTGTCTCTTATGGCAAGTGGGAGATaGGGAAATCGGATCTTGGAA +
Preference number: 2 (lower is better)
Translates to: FPPTRACNISQLVFQLSLMASGR*GNRILE
Trigger: TTCCAAGATCCGATTTCCCCATCTCCCACTTGCCAT...AAGAGACAGTTGGAATACCAGTTGACTAATATTACAAGCTCTTGTAGGGGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
3UTR-3UTR CCA 90 bp TTTCAGTTACAACTTCACTGCCATCACTACTTTAACAAATCAGAAGACGCCAGAATGGCAAGTGGGAGATaGGGAAATCGGATCTTGGAA +
Preference number: 2 (lower is better)
Translates to: FQLQLHCHHYFNKSEDARMASGR*GNRILE
Trigger: TTCCAAGATCCGATTTCCCCATCTCCCACTTGCCAT...TCTGGCGTCTTCTGATTTGTTAAAGTAGTGATGGCAGTGAAGTTGTAACTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
3UTR-3UTR TCA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGTTTCACTGTAGAAATTaGACCTGTGCCATAAAGACA +
Preference number: 2 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLFHCRN*TCAIKT
Trigger: TGTCTTTATGGCACAGGTTCAATTTCTACAGTGAAA...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
3UTR-3UTR TCA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTGCCATGGATAATGAATaGCCAAGGACTATTCATCTT +
Preference number: 2 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFAMDNE*PRTIHL
Trigger: AAGATGAATAGTCCTTGGTCATTCATTATCCATGGC...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
3UTR-3UTR TCA 90 bp TCACTGCAGTATTTGCTGATGGTTACTTTTCTATCGGTTTACACAGTGACCTCTCCTGAAACTCTAGGATaGAGTCTAGTGCTGTATTCT +
Preference number: 2 (lower is better)
Translates to: SLQYLLMVTFLSVYTVTSPETLG*SLVLYS
Trigger: AGAATACAGCACTAGACTTCATCCTAGAGTTTCAGG...AGAGGTCACTGTGTAAACCGATAGAAAAGTAACCATCAGCAAATACTGCAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
3UTR-3UTR TCA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGTATCGGTTTACACAGTaGCCTCTATACTTTGCTAAT +
Preference number: 2 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLYRFTQ*PLYFAN
Trigger: ATTAGCAAAGTATAGAGGTCACTGTGTAAACCGATA...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
3UTR-3UTR GCA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTAACTTCTTCATCTACTaGTCCAACGAGACTTATCTG +
Preference number: 2 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFNFFIY*SNETYL
Trigger: CAGATAAGTCTCGTTGGAGCAGTAGATGAAGAAGTT...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476412.5
3UTR-3UTR GCA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTCTTTCCTGCAACCTATaGCATTTTCACTGTAGAAAT +
Preference number: 2 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFLSCNL*HFHCRN
Trigger: ATTTCTACAGTGAAAATGGCATAGGTTGCAGGAAAG...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
3UTR-3UTR GCA 90 bp TTTCAGTTACAACTTCACTGCCATCACTACTTTAACAAATCAGAAGACGCCAGATGCCCATGTACCAGATaGAGAAATTCTTTCCTGCAA +
Preference number: 2 (lower is better)
Translates to: FQLQLHCHHYFNKSEDARCPCTR*RNSFLQ
Trigger: TTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA...TCTGGCGTCTTCTGATTTGTTAAAGTAGTGATGGCAGTGAAGTTGTAACTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
3UTR-3UTR GCA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTGTTTGGATCAGAAAGTaGTGTGCTTTCTCTTTTGTT +
Preference number: 2 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFVWIRK*CAFSFV
Trigger: AACAAAAGAGAAAGCACAGCACTTTCTGATCCAAAC...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
3UTR-3UTR CCA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGTTTATCCTCACACATTaGGAGTCAACTTCTAATTCT +
Preference number: 2 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLFILTH*ESTSNS
Trigger: AGAATTAGAAGTTGACTCCCAATGTGTGAGGATAAA...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476412.5
3UTR-3UTR CCA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTCATATCACACAGAAGTaGTTGAATGTTCTTGCAGAT +
Preference number: 2 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFHITQK*LNVLAD
Trigger: ATCTGCAAGAACATTCAACCACTTCTGTGTGATATG...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476412.5
3UTR CAA 90 bp ACTTTCAAGACAAGGATAGGTCCCTTACGTGCTAAAGAAAAACATTaGTACTGTGCATTTCCTCTACTTGCATGGCCAATAAATACAGCT +
Preference number: 2 (lower is better)
Translates to: TFKTRIGPLRAKEKH*YCAFPLLAWPINTA
Trigger: AGCTGTATTTATTGGCCATGCAAGTAGAGGAAATGCACAGTACAAATGTTTTTCTTTAGCACGTAAGGGACCTATCCTTGTCTTGAAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
3UTR-3UTR TCA 90 bp TTTCCCCCTACAAGAGCTTGTAATATTAGTCAACTGGTATTCCAACTGTCTCTTTTTCACTGTAGAAATTaGACCTGTGCCATAAAGACA +
Preference number: 2 (lower is better)
Translates to: FPPTRACNISQLVFQLSLFHCRN*TCAIKT
Trigger: TGTCTTTATGGCACAGGTTCAATTTCTACAGTGAAA...AAGAGACAGTTGGAATACCAGTTGACTAATATTACAAGCTCTTGTAGGGGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
3UTR-3UTR GCA 90 bp TTTCCCCCTACAAGAGCTTGTAATATTAGTCAACTGGTATTCCAACTGTCTCTTCTTTCCTGCAACCTATaGCATTTTCACTGTAGAAAT +
Preference number: 2 (lower is better)
Translates to: FPPTRACNISQLVFQLSLLSCNL*HFHCRN
Trigger: ATTTCTACAGTGAAAATGGCATAGGTTGCAGGAAAG...AAGAGACAGTTGGAATACCAGTTGACTAATATTACAAGCTCTTGTAGGGGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
3UTR-3UTR GCA 90 bp TTTCCCCCTACAAGAGCTTGTAATATTAGTCAACTGGTATTCCAACTGTCTCTTGTTTGGATCAGAAAGTaGTGTGCTTTCTCTTTTGTT +
Preference number: 2 (lower is better)
Translates to: FPPTRACNISQLVFQLSLVWIRK*CAFSFV
Trigger: AACAAAAGAGAAAGCACAGCACTTTCTGATCCAAAC...AAGAGACAGTTGGAATACCAGTTGACTAATATTACAAGCTCTTGTAGGGGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
3UTR-3UTR CCA 90 bp TTTCCCCCTACAAGAGCTTGTAATATTAGTCAACTGGTATTCCAACTGTCTCTTGAGATTAATGAGCCATaGATAATGAATGACCAAGGA +
Preference number: 2 (lower is better)
Translates to: FPPTRACNISQLVFQLSLEINEP*IMNDQG
Trigger: TCCTTGGTCATTCATTATCCATGGCTCATTAATCTC...AAGAGACAGTTGGAATACCAGTTGACTAATATTACAAGCTCTTGTAGGGGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
3UTR-3UTR CAA 90 bp TGCTCCAACGAGACTTATCTGCCGCATAGGACCTGCTCGGTAGGTGCCACAGCATTGGGCAGCCCCATCTaGCGACCTCTCCACATTGGC +
Preference number: 3 (lower is better)
Translates to: CSNETYLPHRTCSVGATALGSPI*RPLHIG
Trigger: GCCAATGTGGAGAGGTCGCAAGATGGGGCTGCCCAA...TGCTGTGGCACCTACCGAGCAGGTCCTATGCGGCAGATAAGTCTCGTTGGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476412.5
3UTR GCA 72 bp TACTGCTCCAACGAGACTTATCTGCCGCATAGGACCTaGTCGGTAGGTGCCACAGCAGTATGTCCTGTTGAC +
Preference number: 3 (lower is better)
Translates to: YCSNETYLPHRT*SVGATAVCPVD
Trigger: GTCAACAGGACATACTGCTGTGGCACCTACCGAGCAGGTCCTATGCGGCAGATAAGTCTCGTTGGAGCAGTA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476412.5
3UTR CCA 72 bp ACGAAGCCCTTTATTGCACATGGTGTTCCAACATCTTaGGCAGCCCCATCTTGCGACCTCTCCACATTGGCT +
Preference number: 3 (lower is better)
Translates to: TKPFIAHGVPTS*AAPSCDLSTLA
Trigger: AGCCAATGTGGAGAGGTCGCAAGATGGGGCTGCCCAAGATGTTGGAACACCATGTGCAATAAAGGGCTTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476412.5
3UTR CCA 72 bp CACATTATAGGCCCATCATCACTCTGGGACCTACACTaGAGTCGGAGGCTAGAAAGTGTACCCCAGGGCAAA +
Preference number: 3 (lower is better)
Translates to: HIIGPSSLWDLH*SRRLESVPQGK
Trigger: TTTGCCCTGGGGTACACTTTCTAGCCTCCGACTCCAGTGTAGGTCCCAGAGTGATGATGGGCCTATAATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476412.5
3UTR GCA 72 bp GCTTCCACAACAGGGTGGTACTGTTTAAGCCTTATATaGCAGGCTAAGCTGCACACCGCCGAAACTGTTTTG +
Preference number: 3 (lower is better)
Translates to: ASTTGWYCLSLI*QAKLHTAETVL
Trigger: CAAAACAGTTTCGGCGGTGTGCAGCTTAGCCTGGCATATAAGGCTTAAACAGTACCACCCTGTTGTGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476412.5
3UTR CCA 72 bp AGCTTGGATGACAGATGGCATCTGCTGGATGGCAAGTaGGAGATGGGGAAATCGGATCTTGGAAGACAAGAA +
Preference number: 3 (lower is better)
Translates to: SLDDRWHLLDGK*EMGKSDLGRQE
Trigger: TTCTTGTCTTCCAAGATCCGATTTCCCCATCTCCCACTTGCCATCCAGCAGATGCCATCTGTCATCCAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
3UTR CCA 72 bp AAGGCCAAAATCCAAGACGAAGCCCTTTATTGCACATaGTGTTCCAACATCTTGGGCAGCCCCATCTTGCGA +
Preference number: 3 (lower is better)
Translates to: KAKIQDEALYCT*CSNILGSPILR
Trigger: TCGCAAGATGGGGCTGCCCAAGATGTTGGAACACCATGTGCAATAAAGGGCTTCGTCTTGGATTTTGGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476412.5
3UTR-3UTR CAA 90 bp AGCTTGGATGACAGATGGCATCTGCTGGATGGCAAGTGGGAGATGGGGAAATCGGAGAAGAATTTTACTTaGCACAGCCTGGTAAAGCTC +
Preference number: 3 (lower is better)
Translates to: SLDDRWHLLDGKWEMGKSEKNFT*HSLVKL
Trigger: GAGCTTTACCAGGCTGTGCAAAGTAAAATTCTTCTC...CGATTTCCCCATCTCCCACTTGCCATCCAGCAGATGCCATCTGTCATCCAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
3UTR GCA 72 bp GGTAATAAGGCCAAAATCCAAGACGAAGCCCTTTATTaGACATGGTGTTCCAACATCTTGGGCAGCCCCATC +
Preference number: 3 (lower is better)
Translates to: GNKAKIQDEALY*TWCSNILGSPI
Trigger: GATGGGGCTGCCCAAGATGTTGGAACACCATGTGCAATAAAGGGCTTCGTCTTGGATTTTGGCCTTATTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476412.5
3UTR-3UTR CAA 90 bp AGCTTGGATGACAGATGGCATCTGCTGGATGGCAAGTGGGAGATGGGGAAATCGGATTTGAAGAAGAGATaGAATTGTTACCTCACACCT +
Preference number: 3 (lower is better)
Translates to: SLDDRWHLLDGKWEMGKSDLKKR*NCYLTP
Trigger: AGGTGTGAGGTAACAATTCAATCTCTTCTTCAAATC...CGATTTCCCCATCTCCCACTTGCCATCCAGCAGATGCCATCTGTCATCCAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
3UTR-3UTR CAA 90 bp AGCTTGGATGACAGATGGCATCTGCTGGATGGCAAGTGGGAGATGGGGAAATCGTTTATCATGAAGAGGTaGATGCCAAGTGACAAGAAT +
Preference number: 3 (lower is better)
Translates to: SLDDRWHLLDGKWEMGKSFIMKR*MPSDKN
Trigger: ATTCTTGTCACTTGGCATCAACCTCTTCATGATAAA...CGATTTCCCCATCTCCCACTTGCCATCCAGCAGATGCCATCTGTCATCCAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
3UTR-3UTR CAA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGTGGTGTTCCAACATCTaGGGCAGCCCCATCTTGCGA +
Preference number: 3 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTWCSNI*GSPILR
Trigger: TCGCAAGATGGGGCTGCCCAAGATGTTGGAACACCA...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476412.5
3UTR TCA 72 bp ACAGTCTCCTTGTTTATTAGCAATGACCAGCTTGGATaGCAGATGGCATCTGCTGGATGGCAAGTGGGAGAT +
Preference number: 3 (lower is better)
Translates to: TVSLFISNDQLG*QMASAGWQVGD
Trigger: ATCTCCCACTTGCCATCCAGCAGATGCCATCTGTCATCCAAGCTGGTCATTGCTAATAAACAAGGAGACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
3UTR-3UTR CAA 90 bp TTTCCCCCTACAAGAGCTTGTAATATTAGTCAACTGGTATTCCAACTGTCTCTTTCAGAAGACGCCAGATaGCTCCATGCCTCACTCCAC +
Preference number: 3 (lower is better)
Translates to: FPPTRACNISQLVFQLSLSEDAR*LHASLH
Trigger: GTGGAGTGAGGCATGGAGCAATCTGGCGTCTTCTGA...AAGAGACAGTTGGAATACCAGTTGACTAATATTACAAGCTCTTGTAGGGGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
3UTR-3UTR CAA 90 bp TATCACACAGAAGTGGTTGAATGTTCTTGCAGATTGTGTTGCTGGTCAGAGTCCATTGCTTTCTGTGTTTaGAGTGGCTTCCACAACAGG +
Preference number: 3 (lower is better)
Translates to: YHTEVVECSCRLCCWSESIAFCV*SGFHNR
Trigger: CCTGTTGTGGAAGCCACTCAAAACACAGAAAGCAAT...GGACTCTGACCAGCAACACAATCTGCAAGAACATTCAACCACTTCTGTGTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476412.5
3UTR-3UTR CAA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTAGACGAAGCCCTTTATaGCACATGGTGTTCCAACAT +
Preference number: 3 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFRRSPL*HMVFQH
Trigger: ATGTTGGAACACCATGTGCAATAAAGGGCTTCGTCT...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476412.5
3UTR TCA 72 bp AAACCACAGTCCATGTTAGAATTGCTTTCTGTGTTTTaGGTGGCTTCCACAACAGGGTGGTACTGTTTAAGC +
Preference number: 3 (lower is better)
Translates to: KPQSMLELLSVF*VASTTGWYCLS
Trigger: GCTTAAACAGTACCACCCTGTTGTGGAAGCCACTCAAAACACAGAAAGCAATTCTAACATGGACTGTGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476412.5
3UTR-3UTR CAA 90 bp TCACTGCAGTATTTGCTGATGGTTACTTTTCTATCGGTTTACACAGTGACCTCTGCTGTGCTTTCTCTTTaGTTAAGAAACCAGAGAGCC +
Preference number: 3 (lower is better)
Translates to: SLQYLLMVTFLSVYTVTSAVLSL*LRNQRA
Trigger: GGCTCTCTGGTTTCTTAACAAAAGAGAAAGCACAGC...AGAGGTCACTGTGTAAACCGATAGAAAAGTAACCATCAGCAAATACTGCAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
3UTR-3UTR CAA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTATTGATCGTCGTCTTTaGAAGGGTGACTTTGGCATA +
Preference number: 3 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFIDRRL*KGDFGI
Trigger: TATGCCAAAGTCACCCTTCAAAAGACGACGATCAAT...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476412.5
3UTR TCA 72 bp GCAGGTGGGAAAGATGATGAAGCAGTTGTTAACAGCTaGATCTCTGTGCATGCTTCTTCAGATTCAGTTTTT +
Preference number: 3 (lower is better)
Translates to: AGGKDDEAVVNS*ISVHASSDSVF
Trigger: AAAAACTGAATCTGAAGAAGCATGCACAGAGATTCAGCTGTTAACAACTGCTTCATCATCTTTCCCACCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476412.5
3UTR GCA 72 bp GCCATCACTACTTTAACAAATCAGAAGACGCCAGATTaGTCCATGCCTCACTCCACCAAACCAAATAATTTA +
Preference number: 3 (lower is better)
Translates to: AITTLTNQKTPD*SMPHSTKPNNL
Trigger: TAAATTATTTGGTTTGGTGGAGTGAGGCATGGAGCAATCTGGCGTCTTCTGATTTGTTAAAGTAGTGATGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
3UTR GCA 72 bp CACACAGAAGTGGTTGAATGTTCTTGCAGATTGTGTTaGTGGTCAGAGTCCAGTCTACTTTCCACTTTTAAA +
Preference number: 3 (lower is better)
Translates to: HTEVVECSCRLC*WSESSLLSTFK
Trigger: TTTAAAAGTGGAAAGTAGACTGGACTCTGACCAGCAACACAATCTGCAAGAACATTCAACCACTTCTGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476412.5
3UTR CCA 72 bp ACCACTTTGAATCATCATCCTACTCCTAGCATATCTTaGTATAGAGAATTACTTCTGGGGCAAGAGGAAGAC +
Preference number: 3 (lower is better)
Translates to: TTLNHHPTPSIS*YRELLLGQEED
Trigger: GTCTTCCTCTTGCCCCAGAAGTAATTCTCTATACCAAGATATGCTAGGAGTAGGATGATGATTCAAAGTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
3UTR-3UTR CAA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGGATTTGAAGAAGAGATaGAATTGTTACCTCACACCT +
Preference number: 3 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLDLKKR*NCYLTP
Trigger: AGGTGTGAGGTAACAATTCAATCTCTTCTTCAAATC...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
3UTR-3UTR CAA 90 bp TTTCCCCCTACAAGAGCTTGTAATATTAGTCAACTGGTATTCCAACTGTCTCTTGCTGTGCTTTCTCTTTaGTTAAGAAACCAGAGAGCC +
Preference number: 3 (lower is better)
Translates to: FPPTRACNISQLVFQLSLAVLSL*LRNQRA
Trigger: GGCTCTCTGGTTTCTTAACAAAAGAGAAAGCACAGC...AAGAGACAGTTGGAATACCAGTTGACTAATATTACAAGCTCTTGTAGGGGGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
3UTR-3UTR CAA 90 bp TTTCCCCCTACAAGAGCTTGTAATATTAGTCAACTGGTATTCCAACTGTCTCTTCAGGAGACAGTCTCCTaGTTTATTAGCAATGACCAG +
Preference number: 3 (lower is better)
Translates to: FPPTRACNISQLVFQLSLQETVS*FISNDQ
Trigger: CTGGTCATTGCTAATAAACAAGGAGACTGTCTCCTG...AAGAGACAGTTGGAATACCAGTTGACTAATATTACAAGCTCTTGTAGGGGGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
3UTR TCA 72 bp CTTTCCTGCAACCTATGCCATTTTCACTGTAGAAATTaGACCTGTGCCATAAAGACACAAGTACTAAACCAT +
Preference number: 3 (lower is better)
Translates to: LSCNLCHFHCRN*TCAIKTQVLNH
Trigger: ATGGTTTAGTACTTGTGTCTTTATGGCACAGGTTCAATTTCTACAGTGAAAATGGCATAGGTTGCAGGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
3UTR CCA 72 bp AAAAATGTGTTTGAATATGTACATATCACACAGAAGTaGTTGAATGTTCTTGCAGATTGTGTTGCTGGTCAG +
Preference number: 3 (lower is better)
Translates to: KNVFEYVHITQK*LNVLADCVAGQ
Trigger: CTGACCAGCAACACAATCTGCAAGAACATTCAACCACTTCTGTGTGATATGTACATATTCAAACACATTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476412.5
CDS-3UTR CCA 90 bp TTATTGCACATGGTGTTCCAACATCTTGGGCAGCCCCATCTTGCGACCTCTCCAGGGTGCCAGCGAAGGTaGCGGCGGAGGCGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: LLHMVFQHLGQPHLATSPGCQRR*RRRRQE
Trigger: CTCCTGCCGCCTCCGCCGCCACCTTCGCTGGCACCC...TGGAGAGGTCGCAAGATGGGGCTGCCCAAGATGTTGGAACACCATGTGCAATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476412.5
CDS-3UTR CCA 90 bp AGCTTGGATGACAGATGGCATCTGCTGGATGGCAAGTGGGAGATGGGGAAATCGTGTGGCCCTTATGCTTaGGCCCGGCCGCGCTCACCG +
Preference number: 4 (lower is better)
Translates to: SLDDRWHLLDGKWEMGKSCGPYA*ARPRSP
Trigger: CGGTGAGCGCGGCCGGGCCCAAGCATAAGGGCCACA...CGATTTCCCCATCTCCCACTTGCCATCCAGCAGATGCCATCTGTCATCCAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CCA 90 bp AGCTTGGATGACAGATGGCATCTGCTGGATGGCAAGTGGGAGATGGGGAAATCGCGGTTCCGCAGGAGCTaGGATCACCATCGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: SLDDRWHLLDGKWEMGKSRFRRS*DHHRGR
Trigger: GCGGCCCCGATGGTGATCCCAGCTCCTGCGGAACCG...CGATTTCCCCATCTCCCACTTGCCATCCAGCAGATGCCATCTGTCATCCAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR GCA 90 bp AGCTTGGATGACAGATGGCATCTGCTGGATGGCAAGTGGGAGATGGGGAAATCGTCCTTGTGGCCCTTATaGTTGGGCCCGGCCGCGCTC +
Preference number: 4 (lower is better)
Translates to: SLDDRWHLLDGKWEMGKSSLWPL*LGPAAL
Trigger: GAGCGCGGCCGGGCCCAAGCATAAGGGCCACAAGGA...CGATTTCCCCATCTCCCACTTGCCATCCAGCAGATGCCATCTGTCATCCAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CCA 90 bp TTATTGCACATGGTGTTCCAACATCTTGGGCAGCCCCATCTTGCGACCTCTCCACGGTTCCGCAGGAGCTaGGATCACCATCGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: LLHMVFQHLGQPHLATSPRFRRS*DHHRGR
Trigger: GCGGCCCCGATGGTGATCCCAGCTCCTGCGGAACCG...TGGAGAGGTCGCAAGATGGGGCTGCCCAAGATGTTGGAACACCATGTGCAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476412.5
CDS-3UTR GCA 90 bp TTATTGCACATGGTGTTCCAACATCTTGGGCAGCCCCATCTTGCGACCTCTCCACGCACCGCTCCGACCTaGGCAGCCATTTCACCCACA +
Preference number: 4 (lower is better)
Translates to: LLHMVFQHLGQPHLATSPRTAPT*AAISPT
Trigger: TGTGGGTGAAATGGCTGCGCAGGTCGGAGCGGTGCG...TGGAGAGGTCGCAAGATGGGGCTGCCCAAGATGTTGGAACACCATGTGCAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476412.5
CDS-3UTR GCA 90 bp AGCTTGGATGACAGATGGCATCTGCTGGATGGCAAGTGGGAGATGGGGAAATCGCTGCCGCATAGGACCTaGTCGGTAGGTGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: SLDDRWHLLDGKWEMGKSLPHRT*SVGATA
Trigger: TGCTGTGGCACCTACCGAGCAGGTCCTATGCGGCAG...CGATTTCCCCATCTCCCACTTGCCATCCAGCAGATGCCATCTGTCATCCAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CCA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGGAGGGCCGAGGTGCTTaGGGCCGGGAGAGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLEGRGA*GRERGS
Trigger: GCTGCCCCTCTCCCGGCCCCAAGCACCTCGGCCCTC...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR TCA 90 bp TATCACACAGAAGTGGTTGAATGTTCTTGCAGATTGTGTTGCTGGTCAGAGTCCTCGGGGCCGCGGTGGTaGTGGTGCTTGTGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: YHTEVVECSCRLCCWSESSGPRW*WCLCRS
Trigger: GGAGCGGCACAAGCACCATCACCACCGCGGCCCCGA...GGACTCTGACCAGCAACACAATCTGCAAGAACATTCAACCACTTCTGTGTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476412.5
CDS-3UTR TCA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGTCGGGGCCGCGGTGGTaGTGGTGCTTGTGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLSGPRW*WCLCRS
Trigger: GGAGCGGCACAAGCACCATCACCACCGCGGCCCCGA...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR GCA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGCAGGATGTTGGCGGCTaGGACGCCGCCGGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLQDVGG*DAAGEG
Trigger: CCCCTCACCGGCGGCGTCGCAGCCGCCAACATCCTG...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
CDS-3UTR GCA 90 bp TATCACACAGAAGTGGTTGAATGTTCTTGCAGATTGTGTTGCTGGTCAGAGTCCCAGGATGTTGGCGGCTaGGACGCCGCCGGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: YHTEVVECSCRLCCWSESQDVGG*DAAGEG
Trigger: CCCCTCACCGGCGGCGTCGCAGCCGCCAACATCCTG...GGACTCTGACCAGCAACACAATCTGCAAGAACATTCAACCACTTCTGTGTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476412.5
CDS-3UTR CCA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGGGGTGCCAGCGAAGGTaGCGGCGGAGGCGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: HLKTESSSRPTITYCTNGGCQRR*RRRRQE
Trigger: CTCCTGCCGCCTCCGCCGCCACCTTCGCTGGCACCC...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp ACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCAGGGTGCCAGCGAAGGTaGCGGCGGAGGCGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: TCPCTRCRNSFLQPMPFSGCQRR*RRRRQE
Trigger: CTCCTGCCGCCTCCGCCGCCACCTTCGCTGGCACCC...TGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGGAGGGCCGAGGTGCTTaGGGCCGGGAGAGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: HLKTESSSRPTITYCTNGEGRGA*GRERGS
Trigger: GCTGCCCCTCTCCCGGCCCCAAGCACCTCGGCCCTC...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp ACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCAGAGGGCCGAGGTGCTTaGGGCCGGGAGAGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: TCPCTRCRNSFLQPMPFSEGRGA*GRERGS
Trigger: GCTGCCCCTCTCCCGGCCCCAAGCACCTCGGCCCTC...TGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp TTATTGCACATGGTGTTCCAACATCTTGGGCAGCCCCATCTTGCGACCTCTCCATTGTGCCGCTCCTTGTaGCCCTTATGCTTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: LLHMVFQHLGQPHLATSPLCRSL*PLCLGP
Trigger: CGGGCCCAAGCATAAGGGCCACAAGGAGCGGCACAA...TGGAGAGGTCGCAAGATGGGGCTGCCCAAGATGTTGGAACACCATGTGCAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476412.5
CDS-3UTR CCA 90 bp TCACTGCAGTATTTGCTGATGGTTACTTTTCTATCGGTTTACACAGTGACCTCTAGCGGCCCAGGATGTTaGCGGCTGCGACGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: SLQYLLMVTFLSVYTVTSSGPGC*RLRRRR
Trigger: CCGGCGGCGTCGCAGCCGCCAACATCCTGGGCCGCT...AGAGGTCACTGTGTAAACCGATAGAAAAGTAACCATCAGCAAATACTGCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR TCA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGTCGGGGCCGCGGTGGTaGTGGTGCTTGTGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTSGPRW*WCLCRS
Trigger: GGAGCGGCACAAGCACCATCACCACCGCGGCCCCGA...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR TCA 90 bp TGCTCCAACGAGACTTATCTGCCGCATAGGACCTGCTCGGTAGGTGCCACAGCATATCCCCACAAAATGTaGGGATGCCAGGAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: CSNETYLPHRTCSVGATAYPHKM*GCQEAE
Trigger: TTCTGCTTCCTGGCATCCTCACATTTTGTGGGGATA...TGCTGTGGCACCTACCGAGCAGGTCCTATGCGGCAGATAAGTCTCGTTGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476412.5
CDS-3UTR GCA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTTGTCCGGCTCCTCCTaGGCCGCCACCGCCCGTACT +
Preference number: 4 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFLSGSS*AATART
Trigger: AGTACGGGCGGTGGCGGCGCAGGAGGAGCCGGACAA...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
CDS-3UTR GCA 90 bp ACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCATTGTCCGGCTCCTCCTaGGCCGCCACCGCCCGTACT +
Preference number: 4 (lower is better)
Translates to: TCPCTRCRNSFLQPMPFSLSGSS*AATART
Trigger: AGTACGGGCGGTGGCGGCGCAGGAGGAGCCGGACAA...TGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
CDS-3UTR GCA 90 bp TCACTGCAGTATTTGCTGATGGTTACTTTTCTATCGGTTTACACAGTGACCTCTCAGGATGTTGGCGGCTaGGACGCCGCCGGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: SLQYLLMVTFLSVYTVTSQDVGG*DAAGEG
Trigger: CCCCTCACCGGCGGCGTCGCAGCCGCCAACATCCTG...AGAGGTCACTGTGTAAACCGATAGAAAAGTAACCATCAGCAAATACTGCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CCA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGCTGCCCGCTGGGCATTaGAGTCTCTCCTCCGCCCTC +
Preference number: 4 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLLPAGH*SLSSAL
Trigger: GAGGGCGGAGGAGAGACTCCAATGCCCAGCGGGCAG...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CCA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGTGGGGCTGCATTCGTTaGCGGCAGCGGCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLWGCIR*RQRPRM
Trigger: CATCCTGGGCCGCTGCCGCCAACGAATGCAGCCCCA...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
CDS-3UTR CCA 90 bp TTTCAGTTACAACTTCACTGCCATCACTACTTTAACAAATCAGAAGACGCCAGAGGGTGCCAGCGAAGGTaGCGGCGGAGGCGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: FQLQLHCHHYFNKSEDARGCQRR*RRRRQE
Trigger: CTCCTGCCGCCTCCGCCGCCACCTTCGCTGGCACCC...TCTGGCGTCTTCTGATTTGTTAAAGTAGTGATGGCAGTGAAGTTGTAACTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CCA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTGTGGCCCTTATGCTTaGGCCCGGCCGCGCTCACCG +
Preference number: 4 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFCGPYA*ARPRSP
Trigger: CGGTGAGCGCGGCCGGGCCCAAGCATAAGGGCCACA...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGTGTGGCCCTTATGCTTaGGCCCGGCCGCGCTCACCG +
Preference number: 4 (lower is better)
Translates to: HLKTESSSRPTITYCTNGCGPYA*ARPRSP
Trigger: CGGTGAGCGCGGCCGGGCCCAAGCATAAGGGCCACA...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp AGCTTGGATGACAGATGGCATCTGCTGGATGGCAAGTGGGAGATGGGGAAATCGGTAGTCCAAGAAGTCTaGGAGATAAGCAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: SLDDRWHLLDGKWEMGKSVVQEV*EISSRS
Trigger: GGAGCGGCTGCTTATCTCCCAGACTTCTTGGACTAC...CGATTTCCCCATCTCCCACTTGCCATCCAGCAGATGCCATCTGTCATCCAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CCA 90 bp TGCTCCAACGAGACTTATCTGCCGCATAGGACCTGCTCGGTAGGTGCCACAGCAGCCCTTTATTGCACATaGTGTTCCAACATCTTGGGC +
Preference number: 4 (lower is better)
Translates to: CSNETYLPHRTCSVGATAALYCT*CSNILG
Trigger: GCCCAAGATGTTGGAACACCATGTGCAATAAAGGGC...TGCTGTGGCACCTACCGAGCAGGTCCTATGCGGCAGATAAGTCTCGTTGGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476412.5
CDS-3UTR GCA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGCTGCTAGATCGGCGCTaGCGTTTAACTCCCCGCGGG +
Preference number: 4 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLLLDRR*RLTPRG
Trigger: CCCGCGGGGAGTTAAACGGCAGCGCCGATCTAGCAG...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
CDS-3UTR GCA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCCTTGTGGCCCTTATaGTTGGGCCCGGCCGCGCTC +
Preference number: 4 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFSLWPL*LGPAAL
Trigger: GAGCGCGGCCGGGCCCAAGCATAAGGGCCACAAGGA...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR GCA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGTGGGACAGTTGGGGCTaGATTCGTTGGCGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLWDSWG*IRWRQR
Trigger: GCGCTGCCGCCAACGAATGCAGCCCCAACTGTCCCA...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616024.4
CDS-3UTR CCA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGTGGGGCTGCATTCGTTaGCGGCAGCGGCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: HLKTESSSRPTITYCTNGWGCIR*RQRPRM
Trigger: CATCCTGGGCCGCTGCCGCCAACGAATGCAGCCCCA...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
CDS-3UTR CCA 90 bp TATCACACAGAAGTGGTTGAATGTTCTTGCAGATTGTGTTGCTGGTCAGAGTCCAGGGCCTGGGACAGTTaGGGCTGCATTCGTTGGCGG +
Preference number: 4 (lower is better)
Translates to: YHTEVVECSCRLCCWSESRAWDS*GCIRWR
Trigger: CCGCCAACGAATGCAGCCCCAACTGTCCCAGGCCCT...GGACTCTGACCAGCAACACAATCTGCAAGAACATTCAACCACTTCTGTGTGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476412.5
CDS-3UTR CCA 90 bp TCACTGCAGTATTTGCTGATGGTTACTTTTCTATCGGTTTACACAGTGACCTCTCGGTTCCGCAGGAGCTaGGATCACCATCGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: SLQYLLMVTFLSVYTVTSRFRRS*DHHRGR
Trigger: GCGGCCCCGATGGTGATCCCAGCTCCTGCGGAACCG...AGAGGTCACTGTGTAAACCGATAGAAAAGTAACCATCAGCAAATACTGCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CCA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGCGGTTCCGCAGGAGCTaGGATCACCATCGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTRFRRS*DHHRGR
Trigger: GCGGCCCCGATGGTGATCCCAGCTCCTGCGGAACCG...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp TTATTGCACATGGTGTTCCAACATCTTGGGCAGCCCCATCTTGCGACCTCTCCAGTAGTCCAAGAAGTCTaGGAGATAAGCAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: LLHMVFQHLGQPHLATSPVVQEV*EISSRS
Trigger: GGAGCGGCTGCTTATCTCCCAGACTTCTTGGACTAC...TGGAGAGGTCGCAAGATGGGGCTGCCCAAGATGTTGGAACACCATGTGCAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476412.5
CDS-3UTR CCA 90 bp TGCTCCAACGAGACTTATCTGCCGCATAGGACCTGCTCGGTAGGTGCCACAGCAGATCATCTGTTCTCCTaGCCTTACCCACATTATAGG +
Preference number: 4 (lower is better)
Translates to: CSNETYLPHRTCSVGATADHLFS*PYPHYR
Trigger: CCTATAATGTGGGTAAGGCCAGGAGAACAGATGATC...TGCTGTGGCACCTACCGAGCAGGTCCTATGCGGCAGATAAGTCTCGTTGGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476412.5
CDS-3UTR CCA 90 bp TGCTCCAACGAGACTTATCTGCCGCATAGGACCTGCTCGGTAGGTGCCACAGCATTTCTGTGTTTTGAGTaGCTTCCACAACAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: CSNETYLPHRTCSVGATAFLCFE*LPQQGG
Trigger: ACCACCCTGTTGTGGAAGCCACTCAAAACACAGAAA...TGCTGTGGCACCTACCGAGCAGGTCCTATGCGGCAGATAAGTCTCGTTGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476412.5
CDS-3UTR TCA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGTCAGAGGCGAGAAGGTaGAGAGGGCCGAGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLSEARR*RGPRCL
Trigger: CAAGCACCTCGGCCCTCTTCACCTTCTCGCCTCTGA...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR TCA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGCTCTCTTGGGGGCTTTaGTCAGAGGCACCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLLSWGL*SEAPLQ
Trigger: CTGGAGGGGTGCCTCTGATCAAAGCCCCCAAGAGAG...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR TCA 90 bp TGCTCCAACGAGACTTATCTGCCGCATAGGACCTGCTCGGTAGGTGCCACAGCACCTGAAACTCTAGGATaGAGTCTAGTGCTGTATTCT +
Preference number: 4 (lower is better)
Translates to: CSNETYLPHRTCSVGATAPETLG*SLVLYS
Trigger: AGAATACAGCACTAGACTTCATCCTAGAGTTTCAGG...TGCTGTGGCACCTACCGAGCAGGTCCTATGCGGCAGATAAGTCTCGTTGGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476412.5
CDS-3UTR GCA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGCGCACCGCTCCGACCTaGGCAGCCATTTCACCCACA +
Preference number: 4 (lower is better)
Translates to: HLKTESSSRPTITYCTNGRTAPT*AAISPT
Trigger: TGTGGGTGAAATGGCTGCGCAGGTCGGAGCGGTGCG...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
CDS-3UTR GCA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTCTGCTAGATCGGCGCTaGCGTTTAACTCCCCGCGGG +
Preference number: 4 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFLLDRR*RLTPRG
Trigger: CCCGCGGGGAGTTAAACGGCAGCGCCGATCTAGCAG...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
CDS-3UTR GCA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGCTGCTAGATCGGCGCTaGCGTTTAACTCCCCGCGGG +
Preference number: 4 (lower is better)
Translates to: HLKTESSSRPTITYCTNGLLDRR*RLTPRG
Trigger: CCCGCGGGGAGTTAAACGGCAGCGCCGATCTAGCAG...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
CDS-3UTR GCA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGTGGGACAGTTGGGGCTaGATTCGTTGGCGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: HLKTESSSRPTITYCTNGWDSWG*IRWRQR
Trigger: CCGCTGCCGCCAACGAATGCAGCCCCAACTGTCCCA...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
CDS-3UTR GCA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGTCCTTGTGGCCCTTATaGTTGGGCCCGGCCGCGCTC +
Preference number: 4 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTSLWPL*LGPAAL
Trigger: GAGCGCGGCCGGGCCCAAGCATAAGGGCCACAAGGA...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR GCA 90 bp TTATTGCACATGGTGTTCCAACATCTTGGGCAGCCCCATCTTGCGACCTCTCCACTCTCGCCGTTTTCCTaGTTGTCCTTGTGCTTGAGA +
Preference number: 4 (lower is better)
Translates to: LLHMVFQHLGQPHLATSPLSPFS*LSLCLR
Trigger: TCTCAAGCACAAGGACAAGCAGGAAAACGGCGAGAG...TGGAGAGGTCGCAAGATGGGGCTGCCCAAGATGTTGGAACACCATGTGCAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476412.5
CDS-3UTR GCA 90 bp TTATTGCACATGGTGTTCCAACATCTTGGGCAGCCCCATCTTGCGACCTCTCCATATGCCAGGCTAAGCTaGACACCGCCGAAACTGTTT +
Preference number: 4 (lower is better)
Translates to: LLHMVFQHLGQPHLATSPYARLS*TPPKLF
Trigger: AAACAGTTTCGGCGGTGTGCAGCTTAGCCTGGCATA...TGGAGAGGTCGCAAGATGGGGCTGCCCAAGATGTTGGAACACCATGTGCAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476412.5
CDS-3UTR GCA 90 bp TGCTCCAACGAGACTTATCTGCCGCATAGGACCTGCTCGGTAGGTGCCACAGCATGCCCATGTACCAGATaGAGAAATTCTTTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: CSNETYLPHRTCSVGATACPCTR*RNSFLQ
Trigger: TTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA...TGCTGTGGCACCTACCGAGCAGGTCCTATGCGGCAGATAAGTCTCGTTGGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476412.5
CDS-3UTR CCA 90 bp TCACTGCAGTATTTGCTGATGGTTACTTTTCTATCGGTTTACACAGTGACCTCTCTGCCCGCTGGGCATTaGAGTCTCTCCTCCGCCCTC +
Preference number: 4 (lower is better)
Translates to: SLQYLLMVTFLSVYTVTSLPAGH*SLSSAL
Trigger: GAGGGCGGAGGAGAGACTCCAATGCCCAGCGGGCAG...AGAGGTCACTGTGTAAACCGATAGAAAAGTAACCATCAGCAAATACTGCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CCA 90 bp TCACTGCAGTATTTGCTGATGGTTACTTTTCTATCGGTTTACACAGTGACCTCTCCGCGCACTGCCCGCTaGGCATTGGAGTCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SLQYLLMVTFLSVYTVTSPRTAR*ALESLL
Trigger: GAGGAGAGACTCCAATGCCCAGCGGGCAGTGCGCGG...AGAGGTCACTGTGTAAACCGATAGAAAAGTAACCATCAGCAAATACTGCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CCA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGAGGGCCTGGGACAGTTaGGGCTGCATTCGTTGGCGG +
Preference number: 4 (lower is better)
Translates to: HLKTESSSRPTITYCTNGRAWDS*GCIRWR
Trigger: CCGCCAACGAATGCAGCCCCAACTGTCCCAGGCCCT...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp TTATTGCACATGGTGTTCCAACATCTTGGGCAGCCCCATCTTGCGACCTCTCCAGGTGTTTGTACTCCCTaGGGTACCCGATATTCTTGC +
Preference number: 4 (lower is better)
Translates to: LLHMVFQHLGQPHLATSPGVCTP*GTRYSC
Trigger: GCAAGAATATCGGGTACCCCAGGGAGTACAAACACC...TGGAGAGGTCGCAAGATGGGGCTGCCCAAGATGTTGGAACACCATGTGCAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476412.5
CDS-3UTR CCA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGTGGGGCTGCATTCGTTaGCGGCAGCGCTCCGACCTG +
Preference number: 4 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTWGCIR*RQRSDL
Trigger: CAGGTCGGAGCGCTGCCGCCAACGAATGCAGCCCCA...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616024.4
CDS-3UTR TCA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGTTCTTCGTCCAGAGATaGACATGCCGGAAGCGGCCG +
Preference number: 4 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLFFVQR*TCRKRP
Trigger: CGGCCGCTTCCGGCATGTTCATCTCTGGACGAAGAA...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR TCA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGGCTTGTCCTTGTGCTTaGGATCGGTTCCGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLACPCA*DRFRRS
Trigger: GCTCCTGCGGAACCGATCTCAAGCACAAGGACAAGC...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR TCA 90 bp TATCACACAGAAGTGGTTGAATGTTCTTGCAGATTGTGTTGCTGGTCAGAGTCCGCTTGTCCTTGTGCTTaGGATCGGTTCCGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: YHTEVVECSCRLCCWSESACPCA*DRFRRS
Trigger: GCTCCTGCGGAACCGATCTCAAGCACAAGGACAAGC...GGACTCTGACCAGCAACACAATCTGCAAGAACATTCAACCACTTCTGTGTGATA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476412.5
CDS-3UTR TCA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGCTCTCTTGGGGGCTTTaGTCAGAGGCACCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: HLKTESSSRPTITYCTNGLSWGL*SEAPLQ
Trigger: CTGGAGGGGTGCCTCTGATCAAAGCCCCCAAGAGAG...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR TCA 90 bp AGCTTGGATGACAGATGGCATCTGCTGGATGGCAAGTGGGAGATGGGGAAATCGGCAGTTGTTAACAGCTaGATCTCTGTGCATGCTTCT +
Preference number: 4 (lower is better)
Translates to: SLDDRWHLLDGKWEMGKSAVVNS*ISVHAS
Trigger: AGAAGCATGCACAGAGATTCAGCTGTTAACAACTGC...CGATTTCCCCATCTCCCACTTGCCATCCAGCAGATGCCATCTGTCATCCAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR GCA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGTGGGACAGTTGGGGCTaGATTCGTTGGCGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTWDSWG*IRWRQR
Trigger: CCGCTGCCGCCAACGAATGCAGCCCCAACTGTCCCA...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
CDS-3UTR GCA 90 bp TGCTCCAACGAGACTTATCTGCCGCATAGGACCTGCTCGGTAGGTGCCACAGCAGGTACCCGATATTCTTaGATACCCAAATTTAATCGG +
Preference number: 4 (lower is better)
Translates to: CSNETYLPHRTCSVGATAGTRYS*IPKFNR
Trigger: CCGATTAAATTTGGGTATGCAAGAATATCGGGTACC...TGCTGTGGCACCTACCGAGCAGGTCCTATGCGGCAGATAAGTCTCGTTGGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476412.5
CDS-3UTR GCA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTCTGCCGCATAGGACCTaGTCGGTAGGTGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFLPHRT*SVGATA
Trigger: TGCTGTGGCACCTACCGAGCAGGTCCTATGCGGCAG...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR GCA 90 bp ACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGCCGCATAGGACCTaGTCGGTAGGTGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: TCPCTRCRNSFLQPMPFSLPHRT*SVGATA
Trigger: TGCTGTGGCACCTACCGAGCAGGTCCTATGCGGCAG...TGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp TTTCCCCCTACAAGAGCTTGTAATATTAGTCAACTGGTATTCCAACTGTCTCTTCCGCGCACTGCCCGCTaGGCATTGGAGTCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: FPPTRACNISQLVFQLSLPRTAR*ALESLL
Trigger: GAGGAGAGACTCCAATGCCCAGCGGGCAGTGCGCGG...AAGAGACAGTTGGAATACCAGTTGACTAATATTACAAGCTCTTGTAGGGGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CCA 90 bp TCACTGCAGTATTTGCTGATGGTTACTTTTCTATCGGTTTACACAGTGACCTCTAGGGCCTGGGACAGTTaGGGCTGCATTCGTTGGCGG +
Preference number: 4 (lower is better)
Translates to: SLQYLLMVTFLSVYTVTSRAWDS*GCIRWR
Trigger: CCGCCAACGAATGCAGCCCCAACTGTCCCAGGCCCT...AGAGGTCACTGTGTAAACCGATAGAAAAGTAACCATCAGCAAATACTGCAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CCA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGAGGGCCTGGGACAGTTaGGGCTGCATTCGTTGGCGG +
Preference number: 4 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTRAWDS*GCIRWR
Trigger: CCGCCAACGAATGCAGCCCCAACTGTCCCAGGCCCT...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGTTGTGCCGCTCCTTGTaGCCCTTATGCTTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: HLKTESSSRPTITYCTNGLCRSL*PLCLGP
Trigger: CGGGCCCAAGCATAAGGGCCACAAGGAGCGGCACAA...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR TCA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTTCTTCGTCCAGAGATaGACATGCCGGAAGCGGCCG +
Preference number: 4 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFFFVQR*TCRKRP
Trigger: CGGCCGCTTCCGGCATGTTCATCTCTGGACGAAGAA...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR TCA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGTCAGAGGCGAGAAGGTaGAGAGGGCCGAGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTSEARR*RGPRCL
Trigger: CAAGCACCTCGGCCCTCTTCACCTTCTCGCCTCTGA...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR TCA 90 bp ACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCAGCTTGTCCTTGTGCTTaGGATCGGTTCCGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: TCPCTRCRNSFLQPMPFSACPCA*DRFRRS
Trigger: GCTCCTGCGGAACCGATCTCAAGCACAAGGACAAGC...TGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR TCA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGCTCTCTTGGGGGCTTTaGTCAGAGGCACCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTLSWGL*SEAPLQ
Trigger: CTGGAGGGGTGCCTCTGATCAAAGCCCCCAAGAGAG...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR TCA 90 bp AGCTTGGATGACAGATGGCATCTGCTGGATGGCAAGTGGGAGATGGGGAAATCGCACTGCAGTATTTGCTaGTGGTTACTTTTCTATCGG +
Preference number: 4 (lower is better)
Translates to: SLDDRWHLLDGKWEMGKSHCSIC*WLLFYR
Trigger: CCGATAGAAAAGTAACCATCAGCAAATACTGCAGTG...CGATTTCCCCATCTCCCACTTGCCATCCAGCAGATGCCATCTGTCATCCAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR GCA 90 bp TTTCAGTTACAACTTCACTGCCATCACTACTTTAACAAATCAGAAGACGCCAGACGCACCGCTCCGACCTaGGCAGCCATTTCACCCACA +
Preference number: 4 (lower is better)
Translates to: FQLQLHCHHYFNKSEDARRTAPT*AAISPT
Trigger: TGTGGGTGAAATGGCTGCGCAGGTCGGAGCGGTGCG...TCTGGCGTCTTCTGATTTGTTAAAGTAGTGATGGCAGTGAAGTTGTAACTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR GCA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGGACCTGCTCGGTAGGTaGCACAGCAGTATGTCCTGT +
Preference number: 4 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLDLLGR*HSSMSC
Trigger: ACAGGACATACTGCTGTGGCACCTACCGAGCAGGTC...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR GCA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGCTGCCGCATAGGACCTaGTCGGTAGGTGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTLPHRT*SVGATA
Trigger: TGCTGTGGCACCTACCGAGCAGGTCCTATGCGGCAG...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR GCA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGTGGGCAGCCCCATCTTaGGACCTCTCCACATTGGCT +
Preference number: 4 (lower is better)
Translates to: HLKTESSSRPTITYCTNGWAAPS*DLSTLA
Trigger: AGCCAATGTGGAGAGGTCGCAAGATGGGGCTGCCCA...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476412.5
CDS-3UTR CCA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTAGGCTCAACAGGGCCTaGGACAGTTGGGGCTGCATT +
Preference number: 4 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFRLNRA*DSWGCI
Trigger: AATGCAGCCCCAACTGTCCCAGGCCCTGTTGAGCCT...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGTTGTGCCGCTCCTTGTaGCCCTTATGCTTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTLCRSL*PLCLGP
Trigger: CGGGCCCAAGCATAAGGGCCACAAGGAGCGGCACAA...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp AGCTTGGATGACAGATGGCATCTGCTGGATGGCAAGTGGGAGATGGGGAAATCGTTTACCATTTTCATCTaGTGTTTCTCTCTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: SLDDRWHLLDGKWEMGKSFTIFI*CFSLGG
Trigger: GCCCCCAAGAGAGAAACACCAGATGAAAATGGTAAA...CGATTTCCCCATCTCCCACTTGCCATCCAGCAGATGCCATCTGTCATCCAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CCA 90 bp ACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCAGGCCCATCATCACTCTaGGACCTACACTGGAGTCGG +
Preference number: 4 (lower is better)
Translates to: TCPCTRCRNSFLQPMPFSGPSSL*DLHWSR
Trigger: CCGACTCCAGTGTAGGTCCCAGAGTGATGATGGGCC...TGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGGGCCCATCATCACTCTaGGACCTACACTGGAGTCGG +
Preference number: 4 (lower is better)
Translates to: HLKTESSSRPTITYCTNGGPSSL*DLHWSR
Trigger: CCGACTCCAGTGTAGGTCCCAGAGTGATGATGGGCC...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR TCA 90 bp TTTCCCCCTACAAGAGCTTGTAATATTAGTCAACTGGTATTCCAACTGTCTCTTTCAGAGGCGAGAAGGTaGAGAGGGCCGAGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: FPPTRACNISQLVFQLSLSEARR*RGPRCL
Trigger: CAAGCACCTCGGCCCTCTTCACCTTCTCGCCTCTGA...AAGAGACAGTTGGAATACCAGTTGACTAATATTACAAGCTCTTGTAGGGGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR TCA 90 bp TTTCCCCCTACAAGAGCTTGTAATATTAGTCAACTGGTATTCCAACTGTCTCTTCTCTCTTGGGGGCTTTaGTCAGAGGCACCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: FPPTRACNISQLVFQLSLLSWGL*SEAPLQ
Trigger: CTGGAGGGGTGCCTCTGATCAAAGCCCCCAAGAGAG...AAGAGACAGTTGGAATACCAGTTGACTAATATTACAAGCTCTTGTAGGGGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR GCA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGGACCTGCTCGGTAGGTaGCACAGCAGTATGTCCTGT +
Preference number: 4 (lower is better)
Translates to: HLKTESSSRPTITYCTNGDLLGR*HSSMSC
Trigger: ACAGGACATACTGCTGTGGCACCTACCGAGCAGGTC...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR GCA 90 bp ACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCAGACCTGCTCGGTAGGTaGCACAGCAGTATGTCCTGT +
Preference number: 4 (lower is better)
Translates to: TCPCTRCRNSFLQPMPFSDLLGR*HSSMSC
Trigger: ACAGGACATACTGCTGTGGCACCTACCGAGCAGGTC...TGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR GCA 90 bp AGCTTGGATGACAGATGGCATCTGCTGGATGGCAAGTGGGAGATGGGGAAATCGGCAGAAATTCTTTCCTaGAACCTATGCCATTTTCAC +
Preference number: 4 (lower is better)
Translates to: SLDDRWHLLDGKWEMGKSAEILS*NLCHFH
Trigger: GTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGC...CGATTTCCCCATCTCCCACTTGCCATCCAGCAGATGCCATCTGTCATCCAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR GCA 90 bp ACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACAGAAGACGCCAGATTaGTCCATGCCTCACTCCACC +
Preference number: 4 (lower is better)
Translates to: TCPCTRCRNSFLQPMPFSQKTPD*SMPHST
Trigger: GGTGGAGTGAGGCATGGAGCAATCTGGCGTCTTCTG...TGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CCA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGAGGCTCAACAGGGCCTaGGACAGTTGGGGCTGCATT +
Preference number: 4 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTRLNRA*DSWGCI
Trigger: AATGCAGCCCCAACTGTCCCAGGCCCTGTTGAGCCT...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp TTTCCCCCTACAAGAGCTTGTAATATTAGTCAACTGGTATTCCAACTGTCTCTTTTGTGCCGCTCCTTGTaGCCCTTATGCTTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: FPPTRACNISQLVFQLSLLCRSL*PLCLGP
Trigger: CGGGCCCAAGCATAAGGGCCACAAGGAGCGGCACAA...AAGAGACAGTTGGAATACCAGTTGACTAATATTACAAGCTCTTGTAGGGGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CCA 90 bp AGCTTGGATGACAGATGGCATCTGCTGGATGGCAAGTGGGAGATGGGGAAATCGAACAAATCACATCTTTaGTTATGCGAGGTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: SLDDRWHLLDGKWEMGKSNKSHL*LCEVGH
Trigger: GTGACCAACCTCGCATAACCAAAGATGTGATTTGTT...CGATTTCCCCATCTCCCACTTGCCATCCAGCAGATGCCATCTGTCATCCAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CCA 90 bp TGCTCCAACGAGACTTATCTGCCGCATAGGACCTGCTCGGTAGGTGCCACAGCATTTATCCTCACACATTaGGAGTCAACTTCTAATTCT +
Preference number: 4 (lower is better)
Translates to: CSNETYLPHRTCSVGATAFILTH*ESTSNS
Trigger: AGAATTAGAAGTTGACTCCCAATGTGTGAGGATAAA...TGCTGTGGCACCTACCGAGCAGGTCCTATGCGGCAGATAAGTCTCGTTGGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476412.5
CDS-3UTR CCA 90 bp AGCTTGGATGACAGATGGCATCTGCTGGATGGCAAGTGGGAGATGGGGAAATCGTTGATGCTCAAAATATaGCAGCCTCATCAGAAAGAC +
Preference number: 4 (lower is better)
Translates to: SLDDRWHLLDGKWEMGKSLMLKI*QPHQKD
Trigger: GTCTTTCTGATGAGGCTGCCATATTTTGAGCATCAA...CGATTTCCCCATCTCCCACTTGCCATCCAGCAGATGCCATCTGTCATCCAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CCA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTGGTGTTCCAACATCTTaGGCAGCCCCATCTTGCGAC +
Preference number: 4 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFGVPTS*AAPSCD
Trigger: GTCGCAAGATGGGGCTGCCCAAGATGTTGGAACACC...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476412.5
CDS-3UTR TCA 90 bp TTTCAGTTACAACTTCACTGCCATCACTACTTTAACAAATCAGAAGACGCCAGAGCTTGTCCTTGTGCTTaGGATCGGTTCCGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: FQLQLHCHHYFNKSEDARACPCA*DRFRRS
Trigger: GCTCCTGCGGAACCGATCTCAAGCACAAGGACAAGC...TCTGGCGTCTTCTGATTTGTTAAAGTAGTGATGGCAGTGAAGTTGTAACTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR GCA 90 bp ACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCATCCTGCTTGTCCTTGTaGTTGAGATCGGTTCCGCAG +
Preference number: 4 (lower is better)
Translates to: TCPCTRCRNSFLQPMPFSSCLSL*LRSVPQ
Trigger: CTGCGGAACCGATCTCAAGCACAAGGACAAGCAGGA...TGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR GCA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGCTCTCGCCGTTTTCCTaGTTGTCCTTGTGCTTGAGA +
Preference number: 4 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLLSPFS*LSLCLR
Trigger: TCTCAAGCACAAGGACAAGCAGGAAAACGGCGAGAG...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR GCA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGTATGCCAGGCTAAGCTaGACACCGCCGAAACTGTTT +
Preference number: 4 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLYARLS*TPPKLF
Trigger: AAACAGTTTCGGCGGTGTGCAGCTTAGCCTGGCATA...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR GCA 90 bp AGCTTGGATGACAGATGGCATCTGCTGGATGGCAAGTGGGAGATGGGGAAATCGCTTTCCTGCAACCTATaGCATTTTCACTGTAGAAAT +
Preference number: 4 (lower is better)
Translates to: SLDDRWHLLDGKWEMGKSLSCNL*HFHCRN
Trigger: ATTTCTACAGTGAAAATGGCATAGGTTGCAGGAAAG...CGATTTCCCCATCTCCCACTTGCCATCCAGCAGATGCCATCTGTCATCCAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR GCA 90 bp TTATTGCACATGGTGTTCCAACATCTTGGGCAGCCCCATCTTGCGACCTCTCCAGCAGAAATTCTTTCCTaGAACCTATGCCATTTTCAC +
Preference number: 4 (lower is better)
Translates to: LLHMVFQHLGQPHLATSPAEILS*NLCHFH
Trigger: GTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGC...TGGAGAGGTCGCAAGATGGGGCTGCCCAAGATGTTGGAACACCATGTGCAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476412.5
CDS-3UTR CCA 90 bp ACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCAGTAGTCCAAGAAGTCTaGGAGATAAGCAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: TCPCTRCRNSFLQPMPFSVVQEV*EISSRS
Trigger: GGAGCGGCTGCTTATCTCCCAGACTTCTTGGACTAC...TGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGCTCTGGGACCTACACTaGAGTCGGAGGCTAGAAAGT +
Preference number: 4 (lower is better)
Translates to: HLKTESSSRPTITYCTNGLWDLH*SRRLES
Trigger: ACTTTCTAGCCTCCGACTCCAGTGTAGGTCCCAGAG...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp TTTCAGTTACAACTTCACTGCCATCACTACTTTAACAAATCAGAAGACGCCAGAGGCCCATCATCACTCTaGGACCTACACTGGAGTCGG +
Preference number: 4 (lower is better)
Translates to: FQLQLHCHHYFNKSEDARGPSSL*DLHWSR
Trigger: CCGACTCCAGTGTAGGTCCCAGAGTGATGATGGGCC...TCTGGCGTCTTCTGATTTGTTAAAGTAGTGATGGCAGTGAAGTTGTAACTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CCA 90 bp TTATTGCACATGGTGTTCCAACATCTTGGGCAGCCCCATCTTGCGACCTCTCCAAACAAATCACATCTTTaGTTATGCGAGGTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: LLHMVFQHLGQPHLATSPNKSHL*LCEVGH
Trigger: GTGACCAACCTCGCATAACCAAAGATGTGATTTGTT...TGGAGAGGTCGCAAGATGGGGCTGCCCAAGATGTTGGAACACCATGTGCAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476412.5
CDS-3UTR CCA 90 bp AGCTTGGATGACAGATGGCATCTGCTGGATGGCAAGTGGGAGATGGGGAAATCGGAGATTAATGAGCCATaGATAATGAATGACCAAGGA +
Preference number: 4 (lower is better)
Translates to: SLDDRWHLLDGKWEMGKSEINEP*IMNDQG
Trigger: TCCTTGGTCATTCATTATCCATGGCTCATTAATCTC...CGATTTCCCCATCTCCCACTTGCCATCCAGCAGATGCCATCTGTCATCCAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CCA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTATGGCATCTGCTGGATaGCAAGTGGGAGATGGGGAA +
Preference number: 4 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFMASAG*QVGDGE
Trigger: TTCCCCATCTCCCACTTGCCATCCAGCAGATGCCAT...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CCA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGACAGATGGCATCTGCTaGATGGCAAGTGGGAGATGG +
Preference number: 4 (lower is better)
Translates to: HLKTESSSRPTITYCTNGTDGIC*MASGRW
Trigger: CCATCTCCCACTTGCCATCCAGCAGATGCCATCTGT...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR GCA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGTCCTGCTTGTCCTTGTaGTTGAGATCGGTTCCGCAG +
Preference number: 4 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTSCLSL*LRSVPQ
Trigger: CTGCGGAACCGATCTCAAGCACAAGGACAAGCAGGA...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR GCA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTCTCTCGCCGTTTTCCTaGTTGTCCTTGTGCTTGAGA +
Preference number: 4 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFLSPFS*LSLCLR
Trigger: TCTCAAGCACAAGGACAAGCAGGAAAACGGCGAGAG...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR GCA 90 bp TTTCCCCCTACAAGAGCTTGTAATATTAGTCAACTGGTATTCCAACTGTCTCTTGACCTGCTCGGTAGGTaGCACAGCAGTATGTCCTGT +
Preference number: 4 (lower is better)
Translates to: FPPTRACNISQLVFQLSLDLLGR*HSSMSC
Trigger: ACAGGACATACTGCTGTGGCACCTACCGAGCAGGTC...AAGAGACAGTTGGAATACCAGTTGACTAATATTACAAGCTCTTGTAGGGGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR GCA 90 bp TTTCAGTTACAACTTCACTGCCATCACTACTTTAACAAATCAGAAGACGCCAGACCAACGAGACTTATCTaGCGCATAGGACCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: FQLQLHCHHYFNKSEDARPTRLI*RIGPAR
Trigger: CCGAGCAGGTCCTATGCGGCAGATAAGTCTCGTTGG...TCTGGCGTCTTCTGATTTGTTAAAGTAGTGATGGCAGTGAAGTTGTAACTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR GCA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTATGCCAGGCTAAGCTaGACACCGCCGAAACTGTTT +
Preference number: 4 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFYARLS*TPPKLF
Trigger: AAACAGTTTCGGCGGTGTGCAGCTTAGCCTGGCATA...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR GCA 90 bp ACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCATATGCCAGGCTAAGCTaGACACCGCCGAAACTGTTT +
Preference number: 4 (lower is better)
Translates to: TCPCTRCRNSFLQPMPFSYARLS*TPPKLF
Trigger: AAACAGTTTCGGCGGTGTGCAGCTTAGCCTGGCATA...TGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR GCA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTATGACAGATGGCATCTaGTGGATGGCAAGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFMTDGI*WMASGR
Trigger: TCTCCCACTTGCCATCCAGCAGATGCCATCTGTCAT...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR GCA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGCGCCAGATTGCTCCATaGCTCACTCCACCAAACCAA +
Preference number: 4 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTRQIAP*LTPPNQ
Trigger: TTGGTTTGGTGGAGTGAGGCATGGAGCAATCTGGCG...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR GCA 90 bp TTTCAGTTACAACTTCACTGCCATCACTACTTTAACAAATCAGAAGACGCCAGACAGAAGACGCCAGATTaGTCCATGCCTCACTCCACC +
Preference number: 4 (lower is better)
Translates to: FQLQLHCHHYFNKSEDARQKTPD*SMPHST
Trigger: GGTGGAGTGAGGCATGGAGCAATCTGGCGTCTTCTG...TCTGGCGTCTTCTGATTTGTTAAAGTAGTGATGGCAGTGAAGTTGTAACTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CCA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGGGTGTTTGTACTCCCTaGGGTACCCGATATTCTTGC +
Preference number: 4 (lower is better)
Translates to: HLKTESSSRPTITYCTNGGVCTP*GTRYSC
Trigger: GCAAGAATATCGGGTACCCCAGGGAGTACAAACACC...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGCAAGAGCACCACCATTaGACTGGTGTTCCTCATGAA +
Preference number: 4 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLQEHHH*TGVPHE
Trigger: TTCATGAGGAACACCAGTCCAATGGTGGTGCTCTTG...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGTAGTCCAAGAAGTCTaGGAGATAAGCAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTVVQEV*EISSRS
Trigger: GGAGCGGCTGCTTATCTCCCAGACTTCTTGGACTAC...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGCTCTGGGACCTACACTaGAGTCGGAGGCTAGAAAGT +
Preference number: 4 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTLWDLH*SRRLES
Trigger: ACTTTCTAGCCTCCGACTCCAGTGTAGGTCCCAGAG...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR TCA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTTGCTTTCTGTGTTTTaGGTGGCTTCCACAACAGGG +
Preference number: 4 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFLLSVF*VASTTG
Trigger: CCCTGTTGTGGAAGCCACTCAAAACACAGAAAGCAA...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR TCA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGTATCCCCACAAAATGTaGGGATGCCAGGAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: HLKTESSSRPTITYCTNGYPHKM*GCQEAE
Trigger: TTCTGCTTCCTGGCATCCTCACATTTTGTGGGGATA...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
CDS-3UTR GCA 90 bp TTTCCCCCTACAAGAGCTTGTAATATTAGTCAACTGGTATTCCAACTGTCTCTTTCCTGCTTGTCCTTGTaGTTGAGATCGGTTCCGCAG +
Preference number: 4 (lower is better)
Translates to: FPPTRACNISQLVFQLSLSCLSL*LRSVPQ
Trigger: CTGCGGAACCGATCTCAAGCACAAGGACAAGCAGGA...AAGAGACAGTTGGAATACCAGTTGACTAATATTACAAGCTCTTGTAGGGGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR GCA 90 bp TCACTGCAGTATTTGCTGATGGTTACTTTTCTATCGGTTTACACAGTGACCTCTCTCTCGCCGTTTTCCTaGTTGTCCTTGTGCTTGAGA +
Preference number: 4 (lower is better)
Translates to: SLQYLLMVTFLSVYTVTSLSPFS*LSLCLR
Trigger: TCTCAAGCACAAGGACAAGCAGGAAAACGGCGAGAG...AGAGGTCACTGTGTAAACCGATAGAAAAGTAACCATCAGCAAATACTGCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR GCA 90 bp TATCACACAGAAGTGGTTGAATGTTCTTGCAGATTGTGTTGCTGGTCAGAGTCCTGTTTAAGCCTTATATaGCAGGCTAAGCTGCACACC +
Preference number: 4 (lower is better)
Translates to: YHTEVVECSCRLCCWSESCLSLI*QAKLHT
Trigger: GGTGTGCAGCTTAGCCTGGCATATAAGGCTTAAACA...GGACTCTGACCAGCAACACAATCTGCAAGAACATTCAACCACTTCTGTGTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476412.5
CDS-3UTR GCA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGTCTTGCAGATTGTGTTaGTGGTCAGAGTCCAGTCTA +
Preference number: 4 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLSCRLC*WSESSL
Trigger: TAGACTGGACTCTGACCAGCAACACAATCTGCAAGA...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR GCA 90 bp TCACTGCAGTATTTGCTGATGGTTACTTTTCTATCGGTTTACACAGTGACCTCTATGACAGATGGCATCTaGTGGATGGCAAGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: SLQYLLMVTFLSVYTVTSMTDGI*WMASGR
Trigger: TCTCCCACTTGCCATCCAGCAGATGCCATCTGTCAT...AGAGGTCACTGTGTAAACCGATAGAAAAGTAACCATCAGCAAATACTGCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR GCA 90 bp TTTCCCCCTACAAGAGCTTGTAATATTAGTCAACTGGTATTCCAACTGTCTCTTCGCCAGATTGCTCCATaGCTCACTCCACCAAACCAA +
Preference number: 4 (lower is better)
Translates to: FPPTRACNISQLVFQLSLRQIAP*LTPPNQ
Trigger: TTGGTTTGGTGGAGTGAGGCATGGAGCAATCTGGCG...AAGAGACAGTTGGAATACCAGTTGACTAATATTACAAGCTCTTGTAGGGGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR GCA 90 bp TATCACACAGAAGTGGTTGAATGTTCTTGCAGATTGTGTTGCTGGTCAGAGTCCGACGAAGCCCTTTATTaGACATGGTGTTCCAACATC +
Preference number: 4 (lower is better)
Translates to: YHTEVVECSCRLCCWSESDEALY*TWCSNI
Trigger: GATGTTGGAACACCATGTGCAATAAAGGGCTTCGTC...GGACTCTGACCAGCAACACAATCTGCAAGAACATTCAACCACTTCTGTGTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476412.5
CDS-3UTR CCA 90 bp ACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACAAGAGCACCACCATTaGACTGGTGTTCCTCATGAA +
Preference number: 4 (lower is better)
Translates to: TCPCTRCRNSFLQPMPFSQEHHH*TGVPHE
Trigger: TTCATGAGGAACACCAGTCCAATGGTGGTGCTCTTG...TGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTCAAGAGCACCACCATTaGACTGGTGTTCCTCATGAA +
Preference number: 4 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFQEHHH*TGVPHE
Trigger: TTCATGAGGAACACCAGTCCAATGGTGGTGCTCTTG...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp TTTCCCCCTACAAGAGCTTGTAATATTAGTCAACTGGTATTCCAACTGTCTCTTCTCTGGGACCTACACTaGAGTCGGAGGCTAGAAAGT +
Preference number: 4 (lower is better)
Translates to: FPPTRACNISQLVFQLSLLWDLH*SRRLES
Trigger: ACTTTCTAGCCTCCGACTCCAGTGTAGGTCCCAGAG...AAGAGACAGTTGGAATACCAGTTGACTAATATTACAAGCTCTTGTAGGGGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CCA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGGATCATCTGTTCTCCTaGCCTTACCCACATTATAGG +
Preference number: 4 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLDHLFS*PYPHYR
Trigger: CCTATAATGTGGGTAAGGCCAGGAGAACAGATGATC...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp TTTCCCCCTACAAGAGCTTGTAATATTAGTCAACTGGTATTCCAACTGTCTCTTACAGATGGCATCTGCTaGATGGCAAGTGGGAGATGG +
Preference number: 4 (lower is better)
Translates to: FPPTRACNISQLVFQLSLTDGIC*MASGRW
Trigger: CCATCTCCCACTTGCCATCCAGCAGATGCCATCTGT...AAGAGACAGTTGGAATACCAGTTGACTAATATTACAAGCTCTTGTAGGGGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR TCA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGTTGATCGTCGTCTTTTaGAGGGTGACTTTGGCATAT +
Preference number: 4 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLLIVVF*RVTLAY
Trigger: ATATGCCAAAGTCACCCTTCAAAAGACGACGATCAA...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR TCA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGTTGCTTTCTGTGTTTTaGGTGGCTTCCACAACAGGG +
Preference number: 4 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTLLSVF*VASTTG
Trigger: CCCTGTTGTGGAAGCCACTCAAAACACAGAAAGCAA...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR TCA 90 bp ACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCAGCAGTTGTTAACAGCTaGATCTCTGTGCATGCTTCT +
Preference number: 4 (lower is better)
Translates to: TCPCTRCRNSFLQPMPFSAVVNS*ISVHAS
Trigger: AGAAGCATGCACAGAGATTCAGCTGTTAACAACTGC...TGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR TCA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGTCACACAGAAGTGGTTaGATGTTCTTGCAGATTGTG +
Preference number: 4 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLSHRSG*MFLQIV
Trigger: CACAATCTGCAAGAACATTCAACCACTTCTGTGTGA...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR TCA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGCCTGAAACTCTAGGATaGAGTCTAGTGCTGTATTCT +
Preference number: 4 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLPETLG*SLVLYS
Trigger: AGAATACAGCACTAGACTTCATCCTAGAGTTTCAGG...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
CDS-3UTR TCA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGAGATCCGCTGGTTCCTaGGTGATAATACACAGTGCT +
Preference number: 4 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTRSAGS*VIIHSA
Trigger: AGCACTGTGTATTATCACTCAGGAACCAGCGGATCT...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR GCA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGACAGCTGAATCTCTGTaGATGCTTCTTCAGATTCAG +
Preference number: 4 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLTAESL*MLLQIQ
Trigger: CTGAATCTGAAGAAGCATGCACAGAGATTCAGCTGT...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR GCA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCTTGCAGATTGTGTTaGTGGTCAGAGTCCAGTCTA +
Preference number: 4 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFSCRLC*WSESSL
Trigger: TAGACTGGACTCTGACCAGCAACACAATCTGCAAGA...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp TTTCAGTTACAACTTCACTGCCATCACTACTTTAACAAATCAGAAGACGCCAGAGGTGTTTGTACTCCCTaGGGTACCCGATATTCTTGC +
Preference number: 4 (lower is better)
Translates to: FQLQLHCHHYFNKSEDARGVCTP*GTRYSC
Trigger: GCAAGAATATCGGGTACCCCAGGGAGTACAAACACC...TCTGGCGTCTTCTGATTTGTTAAAGTAGTGATGGCAGTGAAGTTGTAACTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CCA 90 bp TTTCCCCCTACAAGAGCTTGTAATATTAGTCAACTGGTATTCCAACTGTCTCTTGGTGTTTGTACTCCCTaGGGTACCCGATATTCTTGC +
Preference number: 4 (lower is better)
Translates to: FPPTRACNISQLVFQLSLGVCTP*GTRYSC
Trigger: GCAAGAATATCGGGTACCCCAGGGAGTACAAACACC...AAGAGACAGTTGGAATACCAGTTGACTAATATTACAAGCTCTTGTAGGGGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CCA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGGATCATCTGTTCTCCTaGCCTTACCCACATTATAGG +
Preference number: 4 (lower is better)
Translates to: HLKTESSSRPTITYCTNGDHLFS*PYPHYR
Trigger: CCTATAATGTGGGTAAGGCCAGGAGAACAGATGATC...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGCCTTCCCGCCTCATTTaGTTTAGTTTAGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLPSRLI*FSLASS
Trigger: AGATGAAGCTAAACTAAACCAAATGAGGCGGGAAGG...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGTTTCTGTGTTTTGAGTaGCTTCCACAACAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: HLKTESSSRPTITYCTNGFLCFE*LPQQGG
Trigger: ACCACCCTGTTGTGGAAGCCACTCAAAACACAGAAA...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp TCACTGCAGTATTTGCTGATGGTTACTTTTCTATCGGTTTACACAGTGACCTCTATGGCAAGTGGGAGATaGGGAAATCGGATCTTGGAA +
Preference number: 4 (lower is better)
Translates to: SLQYLLMVTFLSVYTVTSMASGR*GNRILE
Trigger: TTCCAAGATCCGATTTCCCCATCTCCCACTTGCCAT...AGAGGTCACTGTGTAAACCGATAGAAAAGTAACCATCAGCAAATACTGCAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR TCA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTTGATCGTCGTCTTTTaGAGGGTGACTTTGGCATAT +
Preference number: 4 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFLIVVF*RVTLAY
Trigger: ATATGCCAAAGTCACCCTTCAAAAGACGACGATCAA...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR TCA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACACAGAAGTGGTTaGATGTTCTTGCAGATTGTG +
Preference number: 4 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFSHRSG*MFLQIV
Trigger: CACAATCTGCAAGAACATTCAACCACTTCTGTGTGA...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR TCA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTAAACCAGAGAGCCACTaGAATTTCCTTGGAAACTAC +
Preference number: 4 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFKPESH*NFLGNY
Trigger: GTAGTTTCCAAGGAAATTTCAGTGGCTCTCTGGTTT...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR TCA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGAAACCAGAGAGCCACTaGAATTTCCTTGGAAACTAC +
Preference number: 4 (lower is better)
Translates to: HLKTESSSRPTITYCTNGKPESH*NFLGNY
Trigger: GTAGTTTCCAAGGAAATTTCAGTGGCTCTCTGGTTT...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR TCA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGCACTGCAGTATTTGCTaGTGGTTACTTTTCTATCGG +
Preference number: 4 (lower is better)
Translates to: HLKTESSSRPTITYCTNGHCSIC*WLLFYR
Trigger: CCGATAGAAAAGTAACCATCAGCAAATACTGCAGTG...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR GCA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGAACTTCTTCATCTACTaGTCCAACGAGACTTATCTG +
Preference number: 4 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLNFFIY*SNETYL
Trigger: CAGATAAGTCTCGTTGGAGCAGTAGATGAAGAAGTT...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR GCA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACATCTTTGGTTATaGGAGGTTGGTCACTCCATT +
Preference number: 4 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFSHLWL*EVGHSI
Trigger: AATGGAGTGACCAACCTCGCATAACCAAAGATGTGA...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR GCA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGTGTTTAAGCCTTATATaGCAGGCTAAGCTGCACACC +
Preference number: 4 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTCLSLI*QAKLHT
Trigger: GGTGTGCAGCTTAGCCTGGCATATAAGGCTTAAACA...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR GCA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGACAGCTGAATCTCTGTaGATGCTTCTTCAGATTCAG +
Preference number: 4 (lower is better)
Translates to: HLKTESSSRPTITYCTNGTAESL*MLLQIQ
Trigger: CTGAATCTGAAGAAGCATGCACAGAGATTCAGCTGT...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR GCA 90 bp ACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCATGCCCATGTACCAGATaGAGAAATTCTTTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: TCPCTRCRNSFLQPMPFSCPCTR*RNSFLQ
Trigger: TTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA...TGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp ACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCATTTACCATTTTCATCTaGTGTTTCTCTCTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: TCPCTRCRNSFLQPMPFSFTIFI*CFSLGG
Trigger: GCCCCCAAGAGAGAAACACCAGATGAAAATGGTAAA...TGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGTTTACCATTTTCATCTaGTGTTTCTCTCTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: HLKTESSSRPTITYCTNGFTIFI*CFSLGG
Trigger: GCCCCCAAGAGAGAAACACCAGATGAAAATGGTAAA...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTTTACCATTTTCATCTaGTGTTTCTCTCTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFFTIFI*CFSLGG
Trigger: GCCCCCAAGAGAGAAACACCAGATGAAAATGGTAAA...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp ACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCATTGGTTATGCGAGGTTaGTCACTCCATTCACCAAAT +
Preference number: 4 (lower is better)
Translates to: TCPCTRCRNSFLQPMPFSLVMRG*SLHSPN
Trigger: ATTTGGTGAATGGAGTGACCAACCTCGCATAACCAA...TGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGTTGGTTATGCGAGGTTaGTCACTCCATTCACCAAAT +
Preference number: 4 (lower is better)
Translates to: HLKTESSSRPTITYCTNGLVMRG*SLHSPN
Trigger: ATTTGGTGAATGGAGTGACCAACCTCGCATAACCAA...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTCCTTCCCGCCTCATTTaGTTTAGTTTAGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFPSRLI*FSLASS
Trigger: AGATGAAGCTAAACTAAACCAAATGAGGCGGGAAGG...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp ACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCAGCTTCCACAACAGGGTaGTACTGTTTAAGCCTTATA +
Preference number: 4 (lower is better)
Translates to: TCPCTRCRNSFLQPMPFSASTTG*YCLSLI
Trigger: TATAAGGCTTAAACAGTACCACCCTGTTGTGGAAGC...TGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGTTTCTGTGTTTTGAGTaGCTTCCACAACAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTFLCFE*LPQQGG
Trigger: ACCACCCTGTTGTGGAAGCCACTCAAAACACAGAAA...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGTTGATGCTCAAAATATaGCAGCCTCATCAGAAAGAC +
Preference number: 4 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLLMLKI*QPHQKD
Trigger: GTCTTTCTGATGAGGCTGCCATATTTTGAGCATCAA...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
CDS-3UTR CCA 90 bp TCACTGCAGTATTTGCTGATGGTTACTTTTCTATCGGTTTACACAGTGACCTCTACAGATGTGAACCTCTaGCATGTGCTAGCTAGTGAA +
Preference number: 4 (lower is better)
Translates to: SLQYLLMVTFLSVYTVTSTDVNL*HVLASE
Trigger: TTCACTAGCTAGCACATGCCAGAGGTTCACATCTGT...AGAGGTCACTGTGTAAACCGATAGAAAAGTAACCATCAGCAAATACTGCAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR TCA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGTTGATCGTCGTCTTTTaGAGGGTGACTTTGGCATAT +
Preference number: 4 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTLIVVF*RVTLAY
Trigger: ATATGCCAAAGTCACCCTTCAAAAGACGACGATCAA...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR TCA 90 bp TTTCCCCCTACAAGAGCTTGTAATATTAGTCAACTGGTATTCCAACTGTCTCTTGCAGTTGTTAACAGCTaGATCTCTGTGCATGCTTCT +
Preference number: 4 (lower is better)
Translates to: FPPTRACNISQLVFQLSLAVVNS*ISVHAS
Trigger: AGAAGCATGCACAGAGATTCAGCTGTTAACAACTGC...AAGAGACAGTTGGAATACCAGTTGACTAATATTACAAGCTCTTGTAGGGGGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR TCA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGAAACCAGAGAGCCACTaGAATTTCCTTGGAAACTAC +
Preference number: 4 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTKPESH*NFLGNY
Trigger: GTAGTTTCCAAGGAAATTTCAGTGGCTCTCTGGTTT...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR TCA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGGCCATGGATAATGAATaGCCAAGGACTATTCATCTT +
Preference number: 4 (lower is better)
Translates to: HLKTESSSRPTITYCTNGAMDNE*PRTIHL
Trigger: AAGATGAATAGTCCTTGGTCATTCATTATCCATGGC...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
CDS-3UTR TCA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGCCTGAAACTCTAGGATaGAGTCTAGTGCTGTATTCT +
Preference number: 4 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTPETLG*SLVLYS
Trigger: AGAATACAGCACTAGACTTCATCCTAGAGTTTCAGG...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
CDS-3UTR TCA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGTTTGGGTTACCACTTTaGATCATCATCCTACTCCTA +
Preference number: 4 (lower is better)
Translates to: HLKTESSSRPTITYCTNGFGLPL*IIILLL
Trigger: TAGGAGTAGGATGATGATTCAAAGTGGTAACCCAAA...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR GCA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGTCACATCTTTGGTTATaGGAGGTTGGTCACTCCATT +
Preference number: 4 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTSHLWL*EVGHSI
Trigger: AATGGAGTGACCAACCTCGCATAACCAAAGATGTGA...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR GCA 90 bp TTTCCCCCTACAAGAGCTTGTAATATTAGTCAACTGGTATTCCAACTGTCTCTTTGTTTAAGCCTTATATaGCAGGCTAAGCTGCACACC +
Preference number: 4 (lower is better)
Translates to: FPPTRACNISQLVFQLSLCLSLI*QAKLHT
Trigger: GGTGTGCAGCTTAGCCTGGCATATAAGGCTTAAACA...AAGAGACAGTTGGAATACCAGTTGACTAATATTACAAGCTCTTGTAGGGGGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR GCA 90 bp TCACTGCAGTATTTGCTGATGGTTACTTTTCTATCGGTTTACACAGTGACCTCTACAGCTGAATCTCTGTaGATGCTTCTTCAGATTCAG +
Preference number: 4 (lower is better)
Translates to: SLQYLLMVTFLSVYTVTSTAESL*MLLQIQ
Trigger: CTGAATCTGAAGAAGCATGCACAGAGATTCAGCTGT...AGAGGTCACTGTGTAAACCGATAGAAAAGTAACCATCAGCAAATACTGCAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR GCA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGACAGCTGAATCTCTGTaGATGCTTCTTCAGATTCAG +
Preference number: 4 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTTAESL*MLLQIQ
Trigger: CTGAATCTGAAGAAGCATGCACAGAGATTCAGCTGT...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR GCA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGCTTTCCTGCAACCTATaGCATTTTCACTGTAGAAAT +
Preference number: 4 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLLSCNL*HFHCRN
Trigger: ATTTCTACAGTGAAAATGGCATAGGTTGCAGGAAAG...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR GCA 90 bp ACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCAGCAGAAATTCTTTCCTaGAACCTATGCCATTTTCAC +
Preference number: 4 (lower is better)
Translates to: TCPCTRCRNSFLQPMPFSAEILS*NLCHFH
Trigger: GTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGC...TGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR GCA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGTGCCCATGTACCAGATaGAGAAATTCTTTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTCPCTR*RNSFLQ
Trigger: TTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR GCA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGGTTTGGATCAGAAAGTaGTGTGCTTTCTCTTTTGTT +
Preference number: 4 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLVWIRK*CAFSFV
Trigger: AACAAAAGAGAAAGCACAGCACTTTCTGATCCAAAC...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGAAATCATCGGCTCTCTaGGTTTTACCATTTTCATCT +
Preference number: 4 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLKSSAL*VLPFSS
Trigger: AGATGAAAATGGTAAAACCCAGAGAGCCGATGATTT...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGAACAAATCACATCTTTaGTTATGCGAGGTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: HLKTESSSRPTITYCTNGNKSHL*LCEVGH
Trigger: GTGACCAACCTCGCATAACCAAAGATGTGATTTGTT...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp TCACTGCAGTATTTGCTGATGGTTACTTTTCTATCGGTTTACACAGTGACCTCTCCTTCCCGCCTCATTTaGTTTAGTTTAGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: SLQYLLMVTFLSVYTVTSPSRLI*FSLASS
Trigger: AGATGAAGCTAAACTAAACCAAATGAGGCGGGAAGG...AGAGGTCACTGTGTAAACCGATAGAAAAGTAACCATCAGCAAATACTGCAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CCA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGCTTCCACAACAGGGTaGTACTGTTTAAGCCTTATA +
Preference number: 4 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTASTTG*YCLSLI
Trigger: TATAAGGCTTAAACAGTACCACCCTGTTGTGGAAGC...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGCATATCACACAGAAGTaGTTGAATGTTCTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLHITQK*LNVLAD
Trigger: ATCTGCAAGAACATTCAACCACTTCTGTGTGATATG...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp TATCACACAGAAGTGGTTGAATGTTCTTGCAGATTGTGTTGCTGGTCAGAGTCCCATATCACACAGAAGTaGTTGAATGTTCTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: YHTEVVECSCRLCCWSESHITQK*LNVLAD
Trigger: ATCTGCAAGAACATTCAACCACTTCTGTGTGATATG...GGACTCTGACCAGCAACACAATCTGCAAGAACATTCAACCACTTCTGTGTGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476412.5
CDS-3UTR CCA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGGAGATTAATGAGCCATaGATAATGAATGACCAAGGA +
Preference number: 4 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLEINEP*IMNDQG
Trigger: TCCTTGGTCATTCATTATCCATGGCTCATTAATCTC...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
CDS-3UTR CCA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGTTGATGCTCAAAATATaGCAGCCTCATCAGAAAGAC +
Preference number: 4 (lower is better)
Translates to: HLKTESSSRPTITYCTNGLMLKI*QPHQKD
Trigger: GTCTTTCTGATGAGGCTGCCATATTTTGAGCATCAA...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
CDS-3UTR CCA 90 bp TTTCAGTTACAACTTCACTGCCATCACTACTTTAACAAATCAGAAGACGCCAGAACAGATGTGAACCTCTaGCATGTGCTAGCTAGTGAA +
Preference number: 4 (lower is better)
Translates to: FQLQLHCHHYFNKSEDARTDVNL*HVLASE
Trigger: TTCACTAGCTAGCACATGCCAGAGGTTCACATCTGT...TCTGGCGTCTTCTGATTTGTTAAAGTAGTGATGGCAGTGAAGTTGTAACTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR TCA 90 bp ACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCATTTCACTGTAGAAATTaGACCTGTGCCATAAAGACA +
Preference number: 4 (lower is better)
Translates to: TCPCTRCRNSFLQPMPFSFHCRN*TCAIKT
Trigger: TGTCTTTATGGCACAGGTTCAATTTCTACAGTGAAA...TGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR TCA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGTTTCACTGTAGAAATTaGACCTGTGCCATAAAGACA +
Preference number: 4 (lower is better)
Translates to: HLKTESSSRPTITYCTNGFHCRN*TCAIKT
Trigger: TGTCTTTATGGCACAGGTTCAATTTCTACAGTGAAA...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR GCA 90 bp TCACTGCAGTATTTGCTGATGGTTACTTTTCTATCGGTTTACACAGTGACCTCTGGTACCCGATATTCTTaGATACCCAAATTTAATCGG +
Preference number: 4 (lower is better)
Translates to: SLQYLLMVTFLSVYTVTSGTRYS*IPKFNR
Trigger: CCGATTAAATTTGGGTATGCAAGAATATCGGGTACC...AGAGGTCACTGTGTAAACCGATAGAAAAGTAACCATCAGCAAATACTGCAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR GCA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGTACCCGATATTCTTaGATACCCAAATTTAATCGG +
Preference number: 4 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTGTRYS*IPKFNR
Trigger: CCGATTAAATTTGGGTATGCAAGAATATCGGGTACC...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR GCA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGAACTTCTTCATCTACTaGTCCAACGAGACTTATCTG +
Preference number: 4 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTNFFIY*SNETYL
Trigger: CAGATAAGTCTCGTTGGAGCAGTAGATGAAGAAGTT...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR GCA 90 bp TTTCAGTTACAACTTCACTGCCATCACTACTTTAACAAATCAGAAGACGCCAGATCACATCTTTGGTTATaGGAGGTTGGTCACTCCATT +
Preference number: 4 (lower is better)
Translates to: FQLQLHCHHYFNKSEDARSHLWL*EVGHSI
Trigger: AATGGAGTGACCAACCTCGCATAACCAAAGATGTGA...TCTGGCGTCTTCTGATTTGTTAAAGTAGTGATGGCAGTGAAGTTGTAACTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR GCA 90 bp TTTCCCCCTACAAGAGCTTGTAATATTAGTCAACTGGTATTCCAACTGTCTCTTTCACATCTTTGGTTATaGGAGGTTGGTCACTCCATT +
Preference number: 4 (lower is better)
Translates to: FPPTRACNISQLVFQLSLSHLWL*EVGHSI
Trigger: AATGGAGTGACCAACCTCGCATAACCAAAGATGTGA...AAGAGACAGTTGGAATACCAGTTGACTAATATTACAAGCTCTTGTAGGGGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR GCA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGCTGAATCTCTGTGCATaGTTCTTCAGATTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: HLKTESSSRPTITYCTNGLNLCA*FFRFSF
Trigger: AAAACTGAATCTGAAGAAGCATGCACAGAGATTCAG...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR GCA 90 bp ACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTTTCCTGCAACCTATaGCATTTTCACTGTAGAAAT +
Preference number: 4 (lower is better)
Translates to: TCPCTRCRNSFLQPMPFSLSCNL*HFHCRN
Trigger: ATTTCTACAGTGAAAATGGCATAGGTTGCAGGAAAG...TGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR GCA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGCAGAAATTCTTTCCTaGAACCTATGCCATTTTCAC +
Preference number: 4 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTAEILS*NLCHFH
Trigger: GTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGC...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR GCA 90 bp ACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCAGTTTGGATCAGAAAGTaGTGTGCTTTCTCTTTTGTT +
Preference number: 4 (lower is better)
Translates to: TCPCTRCRNSFLQPMPFSVWIRK*CAFSFV
Trigger: AACAAAAGAGAAAGCACAGCACTTTCTGATCCAAAC...TGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR GCA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGTGCATTTCCTCTACTTaGATGGCCAATAAATACAGC +
Preference number: 4 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTCISST*MANKYS
Trigger: GCTGTATTTATTGGCCATGCAAGTAGAGGAAATGCA...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CCA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGAAATCATCGGCTCTCTaGGTTTTACCATTTTCATCT +
Preference number: 4 (lower is better)
Translates to: HLKTESSSRPTITYCTNGKSSAL*VLPFSS
Trigger: AGATGAAAATGGTAAAACCCAGAGAGCCGATGATTT...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp TTTCAGTTACAACTTCACTGCCATCACTACTTTAACAAATCAGAAGACGCCAGATTGGTTATGCGAGGTTaGTCACTCCATTCACCAAAT +
Preference number: 4 (lower is better)
Translates to: FQLQLHCHHYFNKSEDARLVMRG*SLHSPN
Trigger: ATTTGGTGAATGGAGTGACCAACCTCGCATAACCAA...TCTGGCGTCTTCTGATTTGTTAAAGTAGTGATGGCAGTGAAGTTGTAACTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CCA 90 bp TTTCCCCCTACAAGAGCTTGTAATATTAGTCAACTGGTATTCCAACTGTCTCTTGCTTCCACAACAGGGTaGTACTGTTTAAGCCTTATA +
Preference number: 4 (lower is better)
Translates to: FPPTRACNISQLVFQLSLASTTG*YCLSLI
Trigger: TATAAGGCTTAAACAGTACCACCCTGTTGTGGAAGC...AAGAGACAGTTGGAATACCAGTTGACTAATATTACAAGCTCTTGTAGGGGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CCA 90 bp TTTCCCCCTACAAGAGCTTGTAATATTAGTCAACTGGTATTCCAACTGTCTCTTTCTTTGCAGATCCGCTaGTTCCTGAGTGATAATACA +
Preference number: 4 (lower is better)
Translates to: FPPTRACNISQLVFQLSLSLQIR*FLSDNT
Trigger: TGTATTATCACTCAGGAACCAGCGGATCTGCAAAGA...AAGAGACAGTTGGAATACCAGTTGACTAATATTACAAGCTCTTGTAGGGGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CCA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGGGAATATTCATTTATTaGGTCCTTTCCATAAGCACA +
Preference number: 4 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLGIFIY*VLSIST
Trigger: TGTGCTTATGGAAAGGACCCAATAAATGAATATTCC...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CCA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTATAGAGAATTACTTCTaGGGCAAGAGGAAGACTTTT +
Preference number: 4 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFIENYF*GKRKTF
Trigger: AAAAGTCTTCCTCTTGCCCCAGAAGTAATTCTCTAT...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR TCA 90 bp TTTCAGTTACAACTTCACTGCCATCACTACTTTAACAAATCAGAAGACGCCAGATTTGGGTTACCACTTTaGATCATCATCCTACTCCTA +
Preference number: 4 (lower is better)
Translates to: FQLQLHCHHYFNKSEDARFGLPL*IIILLL
Trigger: TAGGAGTAGGATGATGATTCAAAGTGGTAACCCAAA...TCTGGCGTCTTCTGATTTGTTAAAGTAGTGATGGCAGTGAAGTTGTAACTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR GCA 90 bp TTTCCCCCTACAAGAGCTTGTAATATTAGTCAACTGGTATTCCAACTGTCTCTTGGTACCCGATATTCTTaGATACCCAAATTTAATCGG +
Preference number: 4 (lower is better)
Translates to: FPPTRACNISQLVFQLSLGTRYS*IPKFNR
Trigger: CCGATTAAATTTGGGTATGCAAGAATATCGGGTACC...AAGAGACAGTTGGAATACCAGTTGACTAATATTACAAGCTCTTGTAGGGGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR GCA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGCTGAATCTCTGTGCATaGTTCTTCAGATTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTLNLCA*FFRFSF
Trigger: AAAACTGAATCTGAAGAAGCATGCACAGAGATTCAG...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR GCA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGTTTGGATCAGAAAGTaGTGTGCTTTCTCTTTTGTT +
Preference number: 4 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTVWIRK*CAFSFV
Trigger: AACAAAAGAGAAAGCACAGCACTTTCTGATCCAAAC...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR GCA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTCAGTTACAACTTCACTaGCATCACTACTTTAACAAA +
Preference number: 4 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFQLQLH*HHYFNK
Trigger: TTTGTTAAAGTAGTGATGGCAGTGAAGTTGTAACTG...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR GCA 90 bp TTTCCCCCTACAAGAGCTTGTAATATTAGTCAACTGGTATTCCAACTGTCTCTTTGCATTTCCTCTACTTaGATGGCCAATAAATACAGC +
Preference number: 4 (lower is better)
Translates to: FPPTRACNISQLVFQLSLCISST*MANKYS
Trigger: GCTGTATTTATTGGCCATGCAAGTAGAGGAAATGCA...AAGAGACAGTTGGAATACCAGTTGACTAATATTACAAGCTCTTGTAGGGGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CCA 90 bp TCACTGCAGTATTTGCTGATGGTTACTTTTCTATCGGTTTACACAGTGACCTCTAAATCATCGGCTCTCTaGGTTTTACCATTTTCATCT +
Preference number: 4 (lower is better)
Translates to: SLQYLLMVTFLSVYTVTSKSSAL*VLPFSS
Trigger: AGATGAAAATGGTAAAACCCAGAGAGCCGATGATTT...AGAGGTCACTGTGTAAACCGATAGAAAAGTAACCATCAGCAAATACTGCAGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CCA 90 bp TTTCAGTTACAACTTCACTGCCATCACTACTTTAACAAATCAGAAGACGCCAGAAACAAATCACATCTTTaGTTATGCGAGGTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: FQLQLHCHHYFNKSEDARNKSHL*LCEVGH
Trigger: GTGACCAACCTCGCATAACCAAAGATGTGATTTGTT...TCTGGCGTCTTCTGATTTGTTAAAGTAGTGATGGCAGTGAAGTTGTAACTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CCA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTTTATCCTCACACATTaGGAGTCAACTTCTAATTCT +
Preference number: 4 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFFILTH*ESTSNS
Trigger: AGAATTAGAAGTTGACTCCCAATGTGTGAGGATAAA...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CCA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGATAGAGAATTACTTCTaGGGCAAGAGGAAGACTTTT +
Preference number: 4 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTIENYF*GKRKTF
Trigger: AAAAGTCTTCCTCTTGCCCCAGAAGTAATTCTCTAT...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR TCA 90 bp TTTCAGTTACAACTTCACTGCCATCACTACTTTAACAAATCAGAAGACGCCAGATATCGGTTTACACAGTaGCCTCTATACTTTGCTAAT +
Preference number: 4 (lower is better)
Translates to: FQLQLHCHHYFNKSEDARYRFTQ*PLYFAN
Trigger: ATTAGCAAAGTATAGAGGTCACTGTGTAAACCGATA...TCTGGCGTCTTCTGATTTGTTAAAGTAGTGATGGCAGTGAAGTTGTAACTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR GCA 90 bp TTTCAGTTACAACTTCACTGCCATCACTACTTTAACAAATCAGAAGACGCCAGACTTTCCTGCAACCTATaGCATTTTCACTGTAGAAAT +
Preference number: 4 (lower is better)
Translates to: FQLQLHCHHYFNKSEDARLSCNL*HFHCRN
Trigger: ATTTCTACAGTGAAAATGGCATAGGTTGCAGGAAAG...TCTGGCGTCTTCTGATTTGTTAAAGTAGTGATGGCAGTGAAGTTGTAACTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR GCA 90 bp TTTCAGTTACAACTTCACTGCCATCACTACTTTAACAAATCAGAAGACGCCAGAGTTTGGATCAGAAAGTaGTGTGCTTTCTCTTTTGTT +
Preference number: 4 (lower is better)
Translates to: FQLQLHCHHYFNKSEDARVWIRK*CAFSFV
Trigger: AACAAAAGAGAAAGCACAGCACTTTCTGATCCAAAC...TCTGGCGTCTTCTGATTTGTTAAAGTAGTGATGGCAGTGAAGTTGTAACTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR GCA 90 bp TCACTGCAGTATTTGCTGATGGTTACTTTTCTATCGGTTTACACAGTGACCTCTCAGTTACAACTTCACTaGCATCACTACTTTAACAAA +
Preference number: 4 (lower is better)
Translates to: SLQYLLMVTFLSVYTVTSQLQLH*HHYFNK
Trigger: TTTGTTAAAGTAGTGATGGCAGTGAAGTTGTAACTG...AGAGGTCACTGTGTAAACCGATAGAAAAGTAACCATCAGCAAATACTGCAGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CCA 90 bp TCACTGCAGTATTTGCTGATGGTTACTTTTCTATCGGTTTACACAGTGACCTCTTTTATCCTCACACATTaGGAGTCAACTTCTAATTCT +
Preference number: 4 (lower is better)
Translates to: SLQYLLMVTFLSVYTVTSFILTH*ESTSNS
Trigger: AGAATTAGAAGTTGACTCCCAATGTGTGAGGATAAA...AGAGGTCACTGTGTAAACCGATAGAAAAGTAACCATCAGCAAATACTGCAGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CCA 90 bp TTTCCCCCTACAAGAGCTTGTAATATTAGTCAACTGGTATTCCAACTGTCTCTTCATATCACACAGAAGTaGTTGAATGTTCTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: FPPTRACNISQLVFQLSLHITQK*LNVLAD
Trigger: ATCTGCAAGAACATTCAACCACTTCTGTGTGATATG...AAGAGACAGTTGGAATACCAGTTGACTAATATTACAAGCTCTTGTAGGGGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CCA 90 bp TTTCAGTTACAACTTCACTGCCATCACTACTTTAACAAATCAGAAGACGCCAGAGGAATATTCATTTATTaGGTCCTTTCCATAAGCACA +
Preference number: 4 (lower is better)
Translates to: FQLQLHCHHYFNKSEDARGIFIY*VLSIST
Trigger: TGTGCTTATGGAAAGGACCCAATAAATGAATATTCC...TCTGGCGTCTTCTGATTTGTTAAAGTAGTGATGGCAGTGAAGTTGTAACTGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS TCA 90 bp CCTTATGCTTGGGCCCGGCCGCGCTCACCGTCAGAGGCGAGAAGGTaGAGAGGGCCGAGGTGCTTGGGGCCGGGAGAGGGGCAGCGACAG +
Preference number: 5 (lower is better)
Translates to: PYAWARPRSPSEARR*RGPRCLGPGEGQRQ
Trigger: CTGTCGCTGCCCCTCTCCCGGCCCCAAGCACCTCGGCCCTCTTCACCTTCTCGCCTCTGACGGTGAGCGCGGCCGGGCCCAAGCATAAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000615321.1
ENST00000616024.4
CDS CCA 90 bp TCCGCGCATCGCGCAAGCGCCGCCCGCGCACTGCCCGCTGGGCATTaGAGTCTCTCCTCCGCCCTCCACTTGTCGGCCGTTCTTCGTCCA +
Preference number: 5 (lower is better)
Translates to: SAHRASAARALPAGH*SLSSALHLSAVLRP
Trigger: TGGACGAAGAACGGCCGACAAGTGGAGGGCGGAGGAGAGACTCCAATGCCCAGCGGGCAGTGCGCGGGCGGCGCTTGCGCGATGCGCGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS CCA 90 bp GAGAAGAGGCTCAACAGGGCCTGGGACAGTTGGGGCTGCATTCGTTaGCGGCAGCGGCCCAGGATGTTGGCGGCTGCGACGCCGCCGGTG +
Preference number: 5 (lower is better)
Translates to: EKRLNRAWDSWGCIR*RQRPRMLAAATPPV
Trigger: CACCGGCGGCGTCGCAGCCGCCAACATCCTGGGCCGCTGCCGCCAACGAATGCAGCCCCAACTGTCCCAGGCCCTGTTGAGCCTCTTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000615321.1
CDS CCA 90 bp CGGCGGAGGCGGCAGGAGAAGAGGCTCAACAGGGCCTGGGACAGTTaGGGCTGCATTCGTTGGCGGCAGCGCTCCGACCTGCGCAGCCAT +
Preference number: 5 (lower is better)
Translates to: RRRRQEKRLNRAWDS*GCIRWRQRSDLRSH
Trigger: ATGGCTGCGCAGGTCGGAGCGCTGCCGCCAACGAATGCAGCCCCAACTGTCCCAGGCCCTGTTGAGCCTCTTCTCCTGCCGCCTCCGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616024.4
CDS TCA 90 bp AGATCGGTTCCGCAGGAGCTGGGATCACCATCGGGGCCGCGGTGGTaGTGGTGCTTGTGCCGCTCCTTGTGGCCCTTATGCTTGGGCCCG +
Preference number: 5 (lower is better)
Translates to: RSVPQELGSPSGPRW*WCLCRSLWPLCLGP
Trigger: CGGGCCCAAGCATAAGGGCCACAAGGAGCGGCACAAGCACCATCACCACCGCGGCCCCGATGGTGATCCCAGCTCCTGCGGAACCGATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000615321.1
ENST00000616024.4
CDS GCA 90 bp TCCTCCTGCGCCGCCACCGCCCGTACTACGCGCACCGCTCCGACCTaGGCAGCCATTTCACCCACAAACACACATTTAAATGGCCCGACC +
Preference number: 5 (lower is better)
Translates to: SSCAATARTTRTAPT*AAISPTNTHLNGPT
Trigger: GGTCGGGCCATTTAAATGTGTGTTTGTGGGTGAAATGGCTGCGCAGGTCGGAGCGGTGCGCGTAGTACGGGCGGTGGCGGCGCAGGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS TCA 90 bp GTCTCTCCTCCGCCCTCCACTTGTCGGCCGTTCTTCGTCCAGAGATaGACATGCCGGAAGCGGCCGTTCCCAGCTTTTCTCCGCAGGCCT +
Preference number: 5 (lower is better)
Translates to: VSPPPSTCRPFFVQR*TCRKRPFPAFLRRP
Trigger: AGGCCTGCGGAGAAAAGCTGGGAACGGCCGCTTCCGGCATGTTCATCTCTGGACGAAGAACGGCCGACAAGTGGAGGGCGGAGGAGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261441.9
CDS-3UTR CAA 90 bp TGCTCCAACGAGACTTATCTGCCGCATAGGACCTGCTCGGTAGGTGCCACAGCACAGGGCCTGGGACAGTaGGGGCTGCATTCGTTGGCG +
Preference number: 5 (lower is better)
Translates to: CSNETYLPHRTCSVGATAQGLGQ*GLHSLA
Trigger: CGCCAACGAATGCAGCCCCAACTGTCCCAGGCCCTG...TGCTGTGGCACCTACCGAGCAGGTCCTATGCGGCAGATAAGTCTCGTTGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476412.5
CDS-3UTR CAA 90 bp TTATTGCACATGGTGTTCCAACATCTTGGGCAGCCCCATCTTGCGACCTCTCCATTGTGGCCCTTATGCTaGGGCCCGGCCGCGCTCACC +
Preference number: 5 (lower is better)
Translates to: LLHMVFQHLGQPHLATSPLWPLC*GPAALT
Trigger: GGTGAGCGCGGCCGGGCCCAAGCATAAGGGCCACAA...TGGAGAGGTCGCAAGATGGGGCTGCCCAAGATGTTGGAACACCATGTGCAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476412.5
CDS-3UTR CAA 90 bp ACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCAAGAGGGCCGAGGTGCTaGGGGCCGGGAGAGGGGCAG +
Preference number: 5 (lower is better)
Translates to: TCPCTRCRNSFLQPMPFSRGPRC*GPGEGQ
Trigger: CTGCCCCTCTCCCGGCCCCAAGCACCTCGGCCCTCT...TGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTAGAGGGCCGAGGTGCTaGGGGCCGGGAGAGGGGCAG +
Preference number: 5 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFRGPRC*GPGEGQ
Trigger: CTGCCCCTCTCCCGGCCCCAAGCACCTCGGCCCTCT...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp AGCTTGGATGACAGATGGCATCTGCTGGATGGCAAGTGGGAGATGGGGAAATCGTCTCTCTTGGGGGCTTaGATCAGAGGCACCCCTCCA +
Preference number: 5 (lower is better)
Translates to: SLDDRWHLLDGKWEMGKSSLLGA*IRGTPP
Trigger: TGGAGGGGTGCCTCTGATCAAAGCCCCCAAGAGAGA...CGATTTCCCCATCTCCCACTTGCCATCCAGCAGATGCCATCTGTCATCCAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CAA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGAGAGGGCCGAGGTGCTaGGGGCCGGGAGAGGGGCAG +
Preference number: 5 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTRGPRC*GPGEGQ
Trigger: CTGCCCCTCTCCCGGCCCCAAGCACCTCGGCCCTCT...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp AGCTTGGATGACAGATGGCATCTGCTGGATGGCAAGTGGGAGATGGGGAAATCGTGCTTGTCCTTGTGCTaGAGATCGGTTCCGCAGGAG +
Preference number: 5 (lower is better)
Translates to: SLDDRWHLLDGKWEMGKSCLSLC*RSVPQE
Trigger: CTCCTGCGGAACCGATCTCAAGCACAAGGACAAGCA...CGATTTCCCCATCTCCCACTTGCCATCCAGCAGATGCCATCTGTCATCCAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CAA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGACTGCCCGCTGGGCATaGGAGTCTCTCCTCCGCCCT +
Preference number: 5 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLTARWA*ESLLRP
Trigger: AGGGCGGAGGAGAGACTCCAATGCCCAGCGGGCAGT...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CAA 90 bp TTTCCCCCTACAAGAGCTTGTAATATTAGTCAACTGGTATTCCAACTGTCTCTTAGAGGGCCGAGGTGCTaGGGGCCGGGAGAGGGGCAG +
Preference number: 5 (lower is better)
Translates to: FPPTRACNISQLVFQLSLRGPRC*GPGEGQ
Trigger: CTGCCCCTCTCCCGGCCCCAAGCACCTCGGCCCTCT...AAGAGACAGTTGGAATACCAGTTGACTAATATTACAAGCTCTTGTAGGGGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CAA 90 bp ACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCATTGTGGCCCTTATGCTaGGGCCCGGCCGCGCTCACC +
Preference number: 5 (lower is better)
Translates to: TCPCTRCRNSFLQPMPFSLWPLC*GPAALT
Trigger: GGTGAGCGCGGCCGGGCCCAAGCATAAGGGCCACAA...TGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGTTGTGGCCCTTATGCTaGGGCCCGGCCGCGCTCACC +
Preference number: 5 (lower is better)
Translates to: HLKTESSSRPTITYCTNGLWPLC*GPAALT
Trigger: GGTGAGCGCGGCCGGGCCCAAGCATAAGGGCCACAA...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp AGCTTGGATGACAGATGGCATCTGCTGGATGGCAAGTGGGAGATGGGGAAATCGTCGCCGTTTTCCTGCTaGTCCTTGTGCTTGAGATCG +
Preference number: 5 (lower is better)
Translates to: SLDDRWHLLDGKWEMGKSSPFSC*SLCLRS
Trigger: CGATCTCAAGCACAAGGACAAGCAGGAAAACGGCGA...CGATTTCCCCATCTCCCACTTGCCATCCAGCAGATGCCATCTGTCATCCAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS GCA 90 bp TTCTTCATCTACTGCTCCAACGAGACTTATCTGCCGCATAGGACCTaGTCGGTAGGTGCCACAGCAGTATGTCCTGTTGACCTGAGTGTG +
Preference number: 5 (lower is better)
Translates to: FFIYCSNETYLPHRT*SVGATAVCPVDLSV
Trigger: CACACTCAGGTCAACAGGACATACTGCTGTGGCACCTACCGAGCAGGTCCTATGCGGCAGATAAGTCTCGTTGGAGCAGTAGATGAAGAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000612242.4
ENST00000615321.1
ENST00000616024.4
CDS-3UTR CAA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGACTGCCCGCTGGGCATaGGAGTCTCTCCTCCGCCCT +
Preference number: 5 (lower is better)
Translates to: HLKTESSSRPTITYCTNGTARWA*ESLLRP
Trigger: AGGGCGGAGGAGAGACTCCAATGCCCAGCGGGCAGT...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CAA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTTGGGGCTGCATTCGTaGGCGGCAGCGGCCCAGGAT +
Preference number: 5 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFLGLHS*AAAAQD
Trigger: ATCCTGGGCCGCTGCCGCCAACGAATGCAGCCCCAA...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
CDS-3UTR CAA 90 bp ACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACAGGGCCTGGGACAGTaGGGGCTGCATTCGTTGGCG +
Preference number: 5 (lower is better)
Translates to: TCPCTRCRNSFLQPMPFSQGLGQ*GLHSLA
Trigger: CGCCAACGAATGCAGCCCCAACTGTCCCAGGCCCTG...TGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGTTGTGGCCCTTATGCTaGGGCCCGGCCGCGCTCACC +
Preference number: 5 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTLWPLC*GPAALT
Trigger: GGTGAGCGCGGCCGGGCCCAAGCATAAGGGCCACAA...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp TTATTGCACATGGTGTTCCAACATCTTGGGCAGCCCCATCTTGCGACCTCTCCATCGCCGTTTTCCTGCTaGTCCTTGTGCTTGAGATCG +
Preference number: 5 (lower is better)
Translates to: LLHMVFQHLGQPHLATSPSPFSC*SLCLRS
Trigger: CGATCTCAAGCACAAGGACAAGCAGGAAAACGGCGA...TGGAGAGGTCGCAAGATGGGGCTGCCCAAGATGTTGGAACACCATGTGCAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476412.5
CDS-3UTR CAA 90 bp ACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCATTGGGGCTGCATTCGTaGGCGGCAGCGCTCCGACCT +
Preference number: 5 (lower is better)
Translates to: TCPCTRCRNSFLQPMPFSLGLHS*AAALRP
Trigger: AGGTCGGAGCGCTGCCGCCAACGAATGCAGCCCCAA...TGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616024.4
CDS-3UTR CAA 90 bp ACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCATCCTCCGCCCTCCACTaGTCGGCCGTTCTTCGTCCA +
Preference number: 5 (lower is better)
Translates to: TCPCTRCRNSFLQPMPFSSSALH*SAVLRP
Trigger: TGGACGAAGAACGGCCGACAAGTGGAGGGCGGAGGA...TGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CAA 90 bp TCACTGCAGTATTTGCTGATGGTTACTTTTCTATCGGTTTACACAGTGACCTCTCAGGGCCTGGGACAGTaGGGGCTGCATTCGTTGGCG +
Preference number: 5 (lower is better)
Translates to: SLQYLLMVTFLSVYTVTSQGLGQ*GLHSLA
Trigger: CGCCAACGAATGCAGCCCCAACTGTCCCAGGCCCTG...AGAGGTCACTGTGTAAACCGATAGAAAAGTAACCATCAGCAAATACTGCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CAA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGTCCTCCGCCCTCCACTaGTCGGCCGTTCTTCGTCCA +
Preference number: 5 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTSSALH*SAVLRP
Trigger: TGGACGAAGAACGGCCGACAAGTGGAGGGCGGAGGA...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CAA 90 bp TTTCAGTTACAACTTCACTGCCATCACTACTTTAACAAATCAGAAGACGCCAGACAGGGCCTGGGACAGTaGGGGCTGCATTCGTTGGCG +
Preference number: 5 (lower is better)
Translates to: FQLQLHCHHYFNKSEDARQGLGQ*GLHSLA
Trigger: CGCCAACGAATGCAGCCCCAACTGTCCCAGGCCCTG...TCTGGCGTCTTCTGATTTGTTAAAGTAGTGATGGCAGTGAAGTTGTAACTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CAA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGTGCTTGTGCCGCTCCTaGTGGCCCTTATGCTTGGGC +
Preference number: 5 (lower is better)
Translates to: HLKTESSSRPTITYCTNGCLCRS*WPLCLG
Trigger: GCCCAAGCATAAGGGCCACAAGGAGCGGCACAAGCA...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTGCTTGTGCCGCTCCTaGTGGCCCTTATGCTTGGGC +
Preference number: 5 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFCLCRS*WPLCLG
Trigger: GCCCAAGCATAAGGGCCACAAGGAGCGGCACAAGCA...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGTCTCTCTTGGGGGCTTaGATCAGAGGCACCCCTCCA +
Preference number: 5 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLSLLGA*IRGTPP
Trigger: TGGAGGGGTGCCTCTGATCAAAGCCCCCAAGAGAGA...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp TTATTGCACATGGTGTTCCAACATCTTGGGCAGCCCCATCTTGCGACCTCTCCATTCTTGCAGATTGTGTaGCTGGTCAGAGTCCAGTCT +
Preference number: 5 (lower is better)
Translates to: LLHMVFQHLGQPHLATSPFLQIV*LVRVQS
Trigger: AGACTGGACTCTGACCAGCAACACAATCTGCAAGAA...TGGAGAGGTCGCAAGATGGGGCTGCCCAAGATGTTGGAACACCATGTGCAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476412.5
CDS-3UTR CAA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTTGGGCAGCCCCATCTaGCGACCTCTCCACATTGGC +
Preference number: 5 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFLGSPI*RPLHIG
Trigger: GCCAATGTGGAGAGGTCGCAAGATGGGGCTGCCCAA...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476412.5
CDS-3UTR CAA 90 bp TATCACACAGAAGTGGTTGAATGTTCTTGCAGATTGTGTTGCTGGTCAGAGTCCTGCTTGTCCTTGTGCTaGAGATCGGTTCCGCAGGAG +
Preference number: 5 (lower is better)
Translates to: YHTEVVECSCRLCCWSESCLSLC*RSVPQE
Trigger: CTCCTGCGGAACCGATCTCAAGCACAAGGACAAGCA...GGACTCTGACCAGCAACACAATCTGCAAGAACATTCAACCACTTCTGTGTGATA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476412.5
CDS-3UTR CAA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGTGCTTGTCCTTGTGCTaGAGATCGGTTCCGCAGGAG +
Preference number: 5 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLCLSLC*RSVPQE
Trigger: CTCCTGCGGAACCGATCTCAAGCACAAGGACAAGCA...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCTCTCTTGGGGGCTTaGATCAGAGGCACCCCTCCA +
Preference number: 5 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFSLLGA*IRGTPP
Trigger: TGGAGGGGTGCCTCTGATCAAAGCCCCCAAGAGAGA...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp TGCTCCAACGAGACTTATCTGCCGCATAGGACCTGCTCGGTAGGTGCCACAGCATTTATCATGAAGAGGTaGATGCCAAGTGACAAGAAT +
Preference number: 5 (lower is better)
Translates to: CSNETYLPHRTCSVGATAFIMKR*MPSDKN
Trigger: ATTCTTGTCACTTGGCATCAACCTCTTCATGATAAA...TGCTGTGGCACCTACCGAGCAGGTCCTATGCGGCAGATAAGTCTCGTTGGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476412.5
CDS-3UTR CAA 90 bp TTTCAGTTACAACTTCACTGCCATCACTACTTTAACAAATCAGAAGACGCCAGATGCTTGTGCCGCTCCTaGTGGCCCTTATGCTTGGGC +
Preference number: 5 (lower is better)
Translates to: FQLQLHCHHYFNKSEDARCLCRS*WPLCLG
Trigger: GCCCAAGCATAAGGGCCACAAGGAGCGGCACAAGCA...TCTGGCGTCTTCTGATTTGTTAAAGTAGTGATGGCAGTGAAGTTGTAACTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CAA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGTCTGGTGTTTCTCTCTaGGGGGCTTTGATCAGAGGC +
Preference number: 5 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLSGVSL*GALIRG
Trigger: GCCTCTGATCAAAGCCCCCAAGAGAGAAACACCAGA...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp TTATTGCACATGGTGTTCCAACATCTTGGGCAGCCCCATCTTGCGACCTCTCCAATTGATCGTCGTCTTTaGAAGGGTGACTTTGGCATA +
Preference number: 5 (lower is better)
Translates to: LLHMVFQHLGQPHLATSPIDRRL*KGDFGI
Trigger: TATGCCAAAGTCACCCTTCAAAAGACGACGATCAAT...TGGAGAGGTCGCAAGATGGGGCTGCCCAAGATGTTGGAACACCATGTGCAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476412.5
CDS-3UTR CAA 90 bp AGCTTGGATGACAGATGGCATCTGCTGGATGGCAAGTGGGAGATGGGGAAATCGAAACAAATCACATCTTaGGTTATGCGAGGTTGGTCA +
Preference number: 5 (lower is better)
Translates to: SLDDRWHLLDGKWEMGKSKQITS*VMRGWS
Trigger: TGACCAACCTCGCATAACCAAAGATGTGATTTGTTT...CGATTTCCCCATCTCCCACTTGCCATCCAGCAGATGCCATCTGTCATCCAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CAA 90 bp AGCTTGGATGACAGATGGCATCTGCTGGATGGCAAGTGGGAGATGGGGAAATCGAAGATGATGAAGCAGTaGTTAACAGCTGAATCTCTG +
Preference number: 5 (lower is better)
Translates to: SLDDRWHLLDGKWEMGKSKMMKQ*LTAESL
Trigger: CAGAGATTCAGCTGTTAACAACTGCTTCATCATCTT...CGATTTCCCCATCTCCCACTTGCCATCCAGCAGATGCCATCTGTCATCCAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CAA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCAGAAGACGCCAGATaGCTCCATGCCTCACTCCAC +
Preference number: 5 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFSEDAR*LHASLH
Trigger: GTGGAGTGAGGCATGGAGCAATCTGGCGTCTTCTGA...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CAA 90 bp AGCTTGGATGACAGATGGCATCTGCTGGATGGCAAGTGGGAGATGGGGAAATCGATTTGGGTTACCACTTaGAATCATCATCCTACTCCT +
Preference number: 5 (lower is better)
Translates to: SLDDRWHLLDGKWEMGKSIWVTT*NHHPTP
Trigger: AGGAGTAGGATGATGATTCAAAGTGGTAACCCAAAT...CGATTTCCCCATCTCCCACTTGCCATCCAGCAGATGCCATCTGTCATCCAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CAA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGTGGTGTTCCAACATCTaGGGCAGCCCCATCTTGCGA +
Preference number: 5 (lower is better)
Translates to: HLKTESSSRPTITYCTNGWCSNI*GSPILR
Trigger: TCGCAAGATGGGGCTGCCCAAGATGTTGGAACACCA...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476412.5
CDS-3UTR CAA 90 bp TATCACACAGAAGTGGTTGAATGTTCTTGCAGATTGTGTTGCTGGTCAGAGTCCTTTTCCTGCTTGTCCTaGTGCTTGAGATCGGTTCCG +
Preference number: 5 (lower is better)
Translates to: YHTEVVECSCRLCCWSESFSCLS*CLRSVP
Trigger: CGGAACCGATCTCAAGCACAAGGACAAGCAGGAAAA...GGACTCTGACCAGCAACACAATCTGCAAGAACATTCAACCACTTCTGTGTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476412.5
CDS-3UTR CAA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGTTTTCCTGCTTGTCCTaGTGCTTGAGATCGGTTCCG +
Preference number: 5 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLFSCLS*CLRSVP
Trigger: CGGAACCGATCTCAAGCACAAGGACAAGCAGGAAAA...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp TTTCCCCCTACAAGAGCTTGTAATATTAGTCAACTGGTATTCCAACTGTCTCTTTCTCTCTTGGGGGCTTaGATCAGAGGCACCCCTCCA +
Preference number: 5 (lower is better)
Translates to: FPPTRACNISQLVFQLSLSLLGA*IRGTPP
Trigger: TGGAGGGGTGCCTCTGATCAAAGCCCCCAAGAGAGA...AAGAGACAGTTGGAATACCAGTTGACTAATATTACAAGCTCTTGTAGGGGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CAA 90 bp ACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCATCTGGTGTTTCTCTCTaGGGGGCTTTGATCAGAGGC +
Preference number: 5 (lower is better)
Translates to: TCPCTRCRNSFLQPMPFSSGVSL*GALIRG
Trigger: GCCTCTGATCAAAGCCCCCAAGAGAGAAACACCAGA...TGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp TCACTGCAGTATTTGCTGATGGTTACTTTTCTATCGGTTTACACAGTGACCTCTTCAGAAGACGCCAGATaGCTCCATGCCTCACTCCAC +
Preference number: 5 (lower is better)
Translates to: SLQYLLMVTFLSVYTVTSSEDAR*LHASLH
Trigger: GTGGAGTGAGGCATGGAGCAATCTGGCGTCTTCTGA...AGAGGTCACTGTGTAAACCGATAGAAAAGTAACCATCAGCAAATACTGCAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CAA 90 bp TTTCCCCCTACAAGAGCTTGTAATATTAGTCAACTGGTATTCCAACTGTCTCTTTGCTTGTCCTTGTGCTaGAGATCGGTTCCGCAGGAG +
Preference number: 5 (lower is better)
Translates to: FPPTRACNISQLVFQLSLCLSLC*RSVPQE
Trigger: CTCCTGCGGAACCGATCTCAAGCACAAGGACAAGCA...AAGAGACAGTTGGAATACCAGTTGACTAATATTACAAGCTCTTGTAGGGGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CAA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTTTTCCTGCTTGTCCTaGTGCTTGAGATCGGTTCCG +
Preference number: 5 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFFSCLS*CLRSVP
Trigger: CGGAACCGATCTCAAGCACAAGGACAAGCAGGAAAA...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGTCGCCGTTTTCCTGCTaGTCCTTGTGCTTGAGATCG +
Preference number: 5 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTSPFSC*SLCLRS
Trigger: CGATCTCAAGCACAAGGACAAGCAGGAAAACGGCGA...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp ACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCAAGTCATAAAAGGTGTTaGTACTCCCTGGGGTACCCG +
Preference number: 5 (lower is better)
Translates to: TCPCTRCRNSFLQPMPFSSHKRC*YSLGYP
Trigger: CGGGTACCCCAGGGAGTACAAACACCTTTTATGACT...TGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGAGTCATAAAAGGTGTTaGTACTCCCTGGGGTACCCG +
Preference number: 5 (lower is better)
Translates to: HLKTESSSRPTITYCTNGSHKRC*YSLGYP
Trigger: CGGGTACCCCAGGGAGTACAAACACCTTTTATGACT...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTAGTCATAAAAGGTGTTaGTACTCCCTGGGGTACCCG +
Preference number: 5 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFSHKRC*YSLGYP
Trigger: CGGGTACCCCAGGGAGTACAAACACCTTTTATGACT...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGTTAGCAATGACCAGCTaGGATGACAGATGGCATCTG +
Preference number: 5 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLLAMTS*DDRWHL
Trigger: CAGATGCCATCTGTCATCCAAGCTGGTCATTGCTAA...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CAA 90 bp TTTCAGTTACAACTTCACTGCCATCACTACTTTAACAAATCAGAAGACGCCAGATCGCCGTTTTCCTGCTaGTCCTTGTGCTTGAGATCG +
Preference number: 5 (lower is better)
Translates to: FQLQLHCHHYFNKSEDARSPFSC*SLCLRS
Trigger: CGATCTCAAGCACAAGGACAAGCAGGAAAACGGCGA...TCTGGCGTCTTCTGATTTGTTAAAGTAGTGATGGCAGTGAAGTTGTAACTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CAA 90 bp ACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACCGCTCCATGCACTATaGCTAAAGCATAGTAAGCAG +
Preference number: 5 (lower is better)
Translates to: TCPCTRCRNSFLQPMPFSPLHAL*LKHSKQ
Trigger: CTGCTTACTATGCTTTAGCAATAGTGCATGGAGCGG...TGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGCCGCTCCATGCACTATaGCTAAAGCATAGTAAGCAG +
Preference number: 5 (lower is better)
Translates to: HLKTESSSRPTITYCTNGPLHAL*LKHSKQ
Trigger: CTGCTTACTATGCTTTAGCAATAGTGCATGGAGCGG...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGTTTGGTTATGCGAGGTaGGTCACTCCATTCACCAAA +
Preference number: 5 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLFGYAR*VTPFTK
Trigger: TTTGGTGAATGGAGTGACCAACCTCGCATAACCAAA...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGATTGCTTTCTGTGTTTaGAGTGGCTTCCACAACAGG +
Preference number: 5 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLIAFCV*SGFHNR
Trigger: CCTGTTGTGGAAGCCACTCAAAACACAGAAAGCAAT...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGTTCTTGCAGATTGTGTaGCTGGTCAGAGTCCAGTCT +
Preference number: 5 (lower is better)
Translates to: HLKTESSSRPTITYCTNGFLQIV*LVRVQS
Trigger: AGACTGGACTCTGACCAGCAACACAATCTGCAAGAA...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGGCTGTGCTTTCTCTTTaGTTAAGAAACCAGAGAGCC +
Preference number: 5 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLAVLSL*LRNQRA
Trigger: GGCTCTCTGGTTTCTTAACAAAAGAGAAAGCACAGC...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTTTGATTGTAGGTCTTaGCAGATCCGCTGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFFDCRS*QIRWFL
Trigger: CAGGAACCAGCGGATCTGCAAAGACCTACAATCAAA...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CAA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGAGACGAAGCCCTTTATaGCACATGGTGTTCCAACAT +
Preference number: 5 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLRRSPL*HMVFQH
Trigger: ATGTTGGAACACCATGTGCAATAAAGGGCTTCGTCT...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476412.5
CDS-3UTR CAA 90 bp TTTCCCCCTACAAGAGCTTGTAATATTAGTCAACTGGTATTCCAACTGTCTCTTTTTTCCTGCTTGTCCTaGTGCTTGAGATCGGTTCCG +
Preference number: 5 (lower is better)
Translates to: FPPTRACNISQLVFQLSLFSCLS*CLRSVP
Trigger: CGGAACCGATCTCAAGCACAAGGACAAGCAGGAAAA...AAGAGACAGTTGGAATACCAGTTGACTAATATTACAAGCTCTTGTAGGGGGAAA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CAA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGGCCAGCACAGACGGTTaGTACTTCCTTATTGTACAT +
Preference number: 5 (lower is better)
Translates to: HLKTESSSRPTITYCTNGASTDG*YFLIVH
Trigger: ATGTACAATAAGGAAGTACAAACCGTCTGTGCTGGC...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTGCCAGCACAGACGGTTaGTACTTCCTTATTGTACAT +
Preference number: 5 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFASTDG*YFLIVH
Trigger: ATGTACAATAAGGAAGTACAAACCGTCTGTGCTGGC...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp TCACTGCAGTATTTGCTGATGGTTACTTTTCTATCGGTTTACACAGTGACCTCTCCGCTCCATGCACTATaGCTAAAGCATAGTAAGCAG +
Preference number: 5 (lower is better)
Translates to: SLQYLLMVTFLSVYTVTSPLHAL*LKHSKQ
Trigger: CTGCTTACTATGCTTTAGCAATAGTGCATGGAGCGG...AGAGGTCACTGTGTAAACCGATAGAAAAGTAACCATCAGCAAATACTGCAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CAA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGCCGCTCCATGCACTATaGCTAAAGCATAGTAAGCAG +
Preference number: 5 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTPLHAL*LKHSKQ
Trigger: CTGCTTACTATGCTTTAGCAATAGTGCATGGAGCGG...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGTTTGGTTATGCGAGGTaGGTCACTCCATTCACCAAA +
Preference number: 5 (lower is better)
Translates to: HLKTESSSRPTITYCTNGFGYAR*VTPFTK
Trigger: TTTGGTGAATGGAGTGACCAACCTCGCATAACCAAA...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTATTGCTTTCTGTGTTTaGAGTGGCTTCCACAACAGG +
Preference number: 5 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFIAFCV*SGFHNR
Trigger: CCTGTTGTGGAAGCCACTCAAAACACAGAAAGCAAT...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp ACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCAATTGCTTTCTGTGTTTaGAGTGGCTTCCACAACAGG +
Preference number: 5 (lower is better)
Translates to: TCPCTRCRNSFLQPMPFSIAFCV*SGFHNR
Trigger: CCTGTTGTGGAAGCCACTCAAAACACAGAAAGCAAT...TGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp TCACTGCAGTATTTGCTGATGGTTACTTTTCTATCGGTTTACACAGTGACCTCTTTCTTGCAGATTGTGTaGCTGGTCAGAGTCCAGTCT +
Preference number: 5 (lower is better)
Translates to: SLQYLLMVTFLSVYTVTSFLQIV*LVRVQS
Trigger: AGACTGGACTCTGACCAGCAACACAATCTGCAAGAA...AGAGGTCACTGTGTAAACCGATAGAAAAGTAACCATCAGCAAATACTGCAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CAA 90 bp ACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACAGGAGACAGTCTCCTaGTTTATTAGCAATGACCAG +
Preference number: 5 (lower is better)
Translates to: TCPCTRCRNSFLQPMPFSQETVS*FISNDQ
Trigger: CTGGTCATTGCTAATAAACAAGGAGACTGTCTCCTG...TGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CAA 90 bp TCACTGCAGTATTTGCTGATGGTTACTTTTCTATCGGTTTACACAGTGACCTCTTTTGATTGTAGGTCTTaGCAGATCCGCTGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: SLQYLLMVTFLSVYTVTSFDCRS*QIRWFL
Trigger: CAGGAACCAGCGGATCTGCAAAGACCTACAATCAAA...AGAGGTCACTGTGTAAACCGATAGAAAAGTAACCATCAGCAAATACTGCAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CAA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGCCAGCACAGACGGTTaGTACTTCCTTATTGTACAT +
Preference number: 5 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTASTDG*YFLIVH
Trigger: ATGTACAATAAGGAAGTACAAACCGTCTGTGCTGGC...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGATCTCTCCATCTCCATaGGAGACAAAAATGAGAGTT +
Preference number: 5 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLISPSP*ETKMRV
Trigger: AACTCTCATTTTTGTCTCCAATGGAGATGGAGAGAT...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp TATCACACAGAAGTGGTTGAATGTTCTTGCAGATTGTGTTGCTGGTCAGAGTCCACTCCATTCACCAAATaGTACAGCTTTCAAAACTCC +
Preference number: 5 (lower is better)
Translates to: YHTEVVECSCRLCCWSESTPFTK*YSFQNS
Trigger: GGAGTTTTGAAAGCTGTACAATTTGGTGAATGGAGT...GGACTCTGACCAGCAACACAATCTGCAAGAACATTCAACCACTTCTGTGTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476412.5
CDS-3UTR CAA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGACTCCATTCACCAAATaGTACAGCTTTCAAAACTCC +
Preference number: 5 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLTPFTK*YSFQNS
Trigger: GGAGTTTTGAAAGCTGTACAATTTGGTGAATGGAGT...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGAAGATGATGAAGCAGTaGTTAACAGCTGAATCTCTG +
Preference number: 5 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLKMMKQ*LTAESL
Trigger: CAGAGATTCAGCTGTTAACAACTGCTTCATCATCTT...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp TTTCCCCCTACAAGAGCTTGTAATATTAGTCAACTGGTATTCCAACTGTCTCTTTTCTTGCAGATTGTGTaGCTGGTCAGAGTCCAGTCT +
Preference number: 5 (lower is better)
Translates to: FPPTRACNISQLVFQLSLFLQIV*LVRVQS
Trigger: AGACTGGACTCTGACCAGCAACACAATCTGCAAGAA...AAGAGACAGTTGGAATACCAGTTGACTAATATTACAAGCTCTTGTAGGGGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CAA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGCTGTGCTTTCTCTTTaGTTAAGAAACCAGAGAGCC +
Preference number: 5 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTAVLSL*LRNQRA
Trigger: GGCTCTCTGGTTTCTTAACAAAAGAGAAAGCACAGC...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTGAGAAGAATTTTACTTaGCACAGCCTGGTAAAGCTC +
Preference number: 5 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFEKNFT*HSLVKL
Trigger: GAGCTTTACCAGGCTGTGCAAAGTAAAATTCTTCTC...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CAA 90 bp TTTCCCCCTACAAGAGCTTGTAATATTAGTCAACTGGTATTCCAACTGTCTCTTTTAGCAATGACCAGCTaGGATGACAGATGGCATCTG +
Preference number: 5 (lower is better)
Translates to: FPPTRACNISQLVFQLSLLAMTS*DDRWHL
Trigger: CAGATGCCATCTGTCATCCAAGCTGGTCATTGCTAA...AAGAGACAGTTGGAATACCAGTTGACTAATATTACAAGCTCTTGTAGGGGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CAA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGCAGGAGACAGTCTCCTaGTTTATTAGCAATGACCAG +
Preference number: 5 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTQETVS*FISNDQ
Trigger: CTGGTCATTGCTAATAAACAAGGAGACTGTCTCCTG...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CAA 90 bp TTTCCCCCTACAAGAGCTTGTAATATTAGTCAACTGGTATTCCAACTGTCTCTTGCCAGCACAGACGGTTaGTACTTCCTTATTGTACAT +
Preference number: 5 (lower is better)
Translates to: FPPTRACNISQLVFQLSLASTDG*YFLIVH
Trigger: ATGTACAATAAGGAAGTACAAACCGTCTGTGCTGGC...AAGAGACAGTTGGAATACCAGTTGACTAATATTACAAGCTCTTGTAGGGGGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CAA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTATCTCTCCATCTCCATaGGAGACAAAAATGAGAGTT +
Preference number: 5 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFISPSP*ETKMRV
Trigger: AACTCTCATTTTTGTCTCCAATGGAGATGGAGAGAT...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp TCACTGCAGTATTTGCTGATGGTTACTTTTCTATCGGTTTACACAGTGACCTCTATTGATCGTCGTCTTTaGAAGGGTGACTTTGGCATA +
Preference number: 5 (lower is better)
Translates to: SLQYLLMVTFLSVYTVTSIDRRL*KGDFGI
Trigger: TATGCCAAAGTCACCCTTCAAAAGACGACGATCAAT...AGAGGTCACTGTGTAAACCGATAGAAAAGTAACCATCAGCAAATACTGCAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CAA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGATTGATCGTCGTCTTTaGAAGGGTGACTTTGGCATA +
Preference number: 5 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTIDRRL*KGDFGI
Trigger: TATGCCAAAGTCACCCTTCAAAAGACGACGATCAAT...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp TTTCAGTTACAACTTCACTGCCATCACTACTTTAACAAATCAGAAGACGCCAGATTTGGTTATGCGAGGTaGGTCACTCCATTCACCAAA +
Preference number: 5 (lower is better)
Translates to: FQLQLHCHHYFNKSEDARFGYAR*VTPFTK
Trigger: TTTGGTGAATGGAGTGACCAACCTCGCATAACCAAA...TCTGGCGTCTTCTGATTTGTTAAAGTAGTGATGGCAGTGAAGTTGTAACTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CAA 90 bp ACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCAAAACAAATCACATCTTaGGTTATGCGAGGTTGGTCA +
Preference number: 5 (lower is better)
Translates to: TCPCTRCRNSFLQPMPFSKQITS*VMRGWS
Trigger: TGACCAACCTCGCATAACCAAAGATGTGATTTGTTT...TGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp TATCACACAGAAGTGGTTGAATGTTCTTGCAGATTGTGTTGCTGGTCAGAGTCCGATTTGAAGAAGAGATaGAATTGTTACCTCACACCT +
Preference number: 5 (lower is better)
Translates to: YHTEVVECSCRLCCWSESDLKKR*NCYLTP
Trigger: AGGTGTGAGGTAACAATTCAATCTCTTCTTCAAATC...GGACTCTGACCAGCAACACAATCTGCAAGAACATTCAACCACTTCTGTGTGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476412.5
CDS-3UTR CAA 90 bp TTTCAGTTACAACTTCACTGCCATCACTACTTTAACAAATCAGAAGACGCCAGAGCTGTGCTTTCTCTTTaGTTAAGAAACCAGAGAGCC +
Preference number: 5 (lower is better)
Translates to: FQLQLHCHHYFNKSEDARAVLSL*LRNQRA
Trigger: GGCTCTCTGGTTTCTTAACAAAAGAGAAAGCACAGC...TCTGGCGTCTTCTGATTTGTTAAAGTAGTGATGGCAGTGAAGTTGTAACTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CAA 90 bp TGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCACTGTTTATCATGAAGAGGTaGATGCCAAGTGACAAGAAT +
Preference number: 5 (lower is better)
Translates to: CPCTRCRNSFLQPMPFSLFIMKR*MPSDKN
Trigger: ATTCTTGTCACTTGGCATCAACCTCTTCATGATAAA...CAGTGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
CDS-3UTR CAA 90 bp ACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTCAATTTGGGTTACCACTTaGAATCATCATCCTACTCCT +
Preference number: 5 (lower is better)
Translates to: TCPCTRCRNSFLQPMPFSIWVTT*NHHPTP
Trigger: AGGAGTAGGATGATGATTCAAAGTGGTAACCCAAAT...TGAAAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CAA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTAGCGTTTTCATGGATTaGGGAGTCTTGTTCCTATAT +
Preference number: 5 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFSVFMD*GVLFLY
Trigger: ATATAGGAACAAGACTCCCAAATCCATGAAAACGCT...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CAA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGATCTCTCCATCTCCATaGGAGACAAAAATGAGAGTT +
Preference number: 5 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTISPSP*ETKMRV
Trigger: AACTCTCATTTTTGTCTCCAATGGAGATGGAGAGAT...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp TCACTGCAGTATTTGCTGATGGTTACTTTTCTATCGGTTTACACAGTGACCTCTATCTCTCCATCTCCATaGGAGACAAAAATGAGAGTT +
Preference number: 5 (lower is better)
Translates to: SLQYLLMVTFLSVYTVTSISPSP*ETKMRV
Trigger: AACTCTCATTTTTGTCTCCAATGGAGATGGAGAGAT...AGAGGTCACTGTGTAAACCGATAGAAAAGTAACCATCAGCAAATACTGCAGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CAA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTCCTGAGTGTGAAAATTaGAAATGGTGGTTGTTTCAA +
Preference number: 5 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFPECEN*KWWLFQ
Trigger: TTGAAACAACCACCATTTCAAATTTTCACACTCAGG...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261441.9
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp CACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGGCCTGAGTGTGAAAATTaGAAATGGTGGTTGTTTCAA +
Preference number: 5 (lower is better)
Translates to: HLKTESSSRPTITYCTNGPECEN*KWWLFQ
Trigger: TTGAAACAACCACCATTTCAAATTTTCACACTCAGG...CCCGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261441.9
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGAAACAAATCACATCTTaGGTTATGCGAGGTTGGTCA +
Preference number: 5 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTKQITS*VMRGWS
Trigger: TGACCAACCTCGCATAACCAAAGATGTGATTTGTTT...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGAAGATGATGAAGCAGTaGTTAACAGCTGAATCTCTG +
Preference number: 5 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTKMMKQ*LTAESL
Trigger: CAGAGATTCAGCTGTTAACAACTGCTTCATCATCTT...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTGATTTGAAGAAGAGATaGAATTGTTACCTCACACCT +
Preference number: 5 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFDLKKR*NCYLTP
Trigger: AGGTGTGAGGTAACAATTCAATCTCTTCTTCAAATC...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp CTTACTTGCCCATGTACCAGATGCAGAAATTCTTTCCTGCAACCTATGCCATTTTTTATCATGAAGAGGTaGATGCCAAGTGACAAGAAT +
Preference number: 5 (lower is better)
Translates to: LTCPCTRCRNSFLQPMPFFIMKR*MPSDKN
Trigger: ATTCTTGTCACTTGGCATCAACCTCTTCATGATAAA...AAATGGCATAGGTTGCAGGAAAGAATTTCTGCATCTGGTACATGGGCAAGTAAG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
CDS-3UTR CAA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGCCTGAGTGTGAAAATTaGAAATGGTGGTTGTTTCAA +
Preference number: 5 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTPECEN*KWWLFQ
Trigger: TTGAAACAACCACCATTTCAAATTTTCACACTCAGG...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261441.9
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp TTTCAGTTACAACTTCACTGCCATCACTACTTTAACAAATCAGAAGACGCCAGAACTCCATTCACCAAATaGTACAGCTTTCAAAACTCC +
Preference number: 5 (lower is better)
Translates to: FQLQLHCHHYFNKSEDARTPFTK*YSFQNS
Trigger: GGAGTTTTGAAAGCTGTACAATTTGGTGAATGGAGT...TCTGGCGTCTTCTGATTTGTTAAAGTAGTGATGGCAGTGAAGTTGTAACTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CAA 90 bp TTTCCCCCTACAAGAGCTTGTAATATTAGTCAACTGGTATTCCAACTGTCTCTTAAACAAATCACATCTTaGGTTATGCGAGGTTGGTCA +
Preference number: 5 (lower is better)
Translates to: FPPTRACNISQLVFQLSLKQITS*VMRGWS
Trigger: TGACCAACCTCGCATAACCAAAGATGTGATTTGTTT...AAGAGACAGTTGGAATACCAGTTGACTAATATTACAAGCTCTTGTAGGGGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CAA 90 bp TTTCCCCCTACAAGAGCTTGTAATATTAGTCAACTGGTATTCCAACTGTCTCTTAAGATGATGAAGCAGTaGTTAACAGCTGAATCTCTG +
Preference number: 5 (lower is better)
Translates to: FPPTRACNISQLVFQLSLKMMKQ*LTAESL
Trigger: CAGAGATTCAGCTGTTAACAACTGCTTCATCATCTT...AAGAGACAGTTGGAATACCAGTTGACTAATATTACAAGCTCTTGTAGGGGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CAA 90 bp CACACCTTAAAACAGAAAGTAGCAGCAGACCCACTATTACATACTGTACTAACGGATTTGAAGAAGAGATaGAATTGTTACCTCACACCT +
Preference number: 5 (lower is better)
Translates to: HTLKQKVAADPLLHTVLTDLKKR*NCYLTP
Trigger: AGGTGTGAGGTAACAATTCAATCTCTTCTTCAAATC...CGTTAGTACAGTATGTAATAGTGGGTCTGCTGCTACTTTCTGTTTTAAGGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000616024.4
CDS-3UTR CAA 90 bp TTTCCCCCTACAAGAGCTTGTAATATTAGTCAACTGGTATTCCAACTGTCTCTTAGCGTTTTCATGGATTaGGGAGTCTTGTTCCTATAT +
Preference number: 5 (lower is better)
Translates to: FPPTRACNISQLVFQLSLSVFMD*GVLFLY
Trigger: ATATAGGAACAAGACTCCCAAATCCATGAAAACGCT...AAGAGACAGTTGGAATACCAGTTGACTAATATTACAAGCTCTTGTAGGGGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS-3UTR CAA 90 bp TTTCCCCCTACAAGAGCTTGTAATATTAGTCAACTGGTATTCCAACTGTCTCTTGATTTGAAGAAGAGATaGAATTGTTACCTCACACCT +
Preference number: 5 (lower is better)
Translates to: FPPTRACNISQLVFQLSLDLKKR*NCYLTP
Trigger: AGGTGTGAGGTAACAATTCAATCTCTTCTTCAAATC...AAGAGACAGTTGGAATACCAGTTGACTAATATTACAAGCTCTTGTAGGGGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS GCA 72 bp CCCCGTCCGCGCATCGCGCAAGCGCCGCCCGCGCACTaGCCGCTGGGCATTGGAGTCTCTCCTCCGCCCTCC +
Preference number: 6 (lower is better)
Translates to: PRPRIAQAPPAH*PLGIGVSPPPS
Trigger: GGAGGGCGGAGGAGAGACTCCAATGCCCAGCGGGCAGTGCGCGGGCGGCGCTTGCGCGATGCGCGGACGGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS TCA 72 bp TGGGCCCGGCCGCGCTCACCGTCAGAGGCGAGAAGGTaGAGAGGGCCGAGGTGCTTGGGGCCGGGAGAGGGG +
Preference number: 6 (lower is better)
Translates to: WARPRSPSEARR*RGPRCLGPGEG
Trigger: CCCCTCTCCCGGCCCCAAGCACCTCGGCCCTCTTCACCTTCTCGCCTCTGACGGTGAGCGCGGCCGGGCCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000615321.1
ENST00000616024.4
CDS CCA 72 bp CGTCAGAGGCGAGAAGGTGAAGAGGGCCGAGGTGCTTaGGGCCGGGAGAGGGGCAGCGACAGCGGGCCCGGC +
Preference number: 6 (lower is better)
Translates to: RQRREGEEGRGA*GRERGSDSGPG
Trigger: GCCGGGCCCGCTGTCGCTGCCCCTCTCCCGGCCCCAAGCACCTCGGCCCTCTTCACCTTCTCGCCTCTGACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000615321.1
ENST00000616024.4
CDS CAA 72 bp TGGGGCTGCATTCGTTGGCGGCAGCGGCCCAGGATGTaGGCGGCTGCGACGCCGCCGGTGAGGGGGAGCGAG +
Preference number: 6 (lower is better)
Translates to: WGCIRWRQRPRM*AAATPPVRGSE
Trigger: CTCGCTCCCCCTCACCGGCGGCGTCGCAGCCGCCAACATCCTGGGCCGCTGCCGCCAACGAATGCAGCCCCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000615321.1
CDS CCA 72 bp CGCGCATCGCGCAAGCGCCGCCCGCGCACTGCCCGCTaGGCATTGGAGTCTCTCCTCCGCCCTCCACTTGTC +
Preference number: 6 (lower is better)
Translates to: RASRKRRPRTAR*ALESLLRPPLV
Trigger: GACAAGTGGAGGGCGGAGGAGAGACTCCAATGCCCAGCGGGCAGTGCGCGGGCGGCGCTTGCGCGATGCGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS CAA 90 bp GTCCGCGCATCGCGCAAGCGCCGCCCGCGCACTGCCCGCTGGGCATaGGAGTCTCTCCTCCGCCCTCCACTTGTCGGCCGTTCTTCGTCC +
Preference number: 6 (lower is better)
Translates to: VRASRKRRPRTARWA*ESLLRPPLVGRSSS
Trigger: GGACGAAGAACGGCCGACAAGTGGAGGGCGGAGGAGAGACTCCAATGCCCAGCGGGCAGTGCGCGGGCGGCGCTTGCGCGATGCGCGGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS CAA 90 bp GCGGCGGAGGCGGCAGGAGAAGAGGCTCAACAGGGCCTGGGACAGTaGGGGCTGCATTCGTTGGCGGCAGCGCTCCGACCTGCGCAGCCA +
Preference number: 6 (lower is better)
Translates to: AAEAAGEEAQQGLGQ*GLHSLAAALRPAQP
Trigger: TGGCTGCGCAGGTCGGAGCGCTGCCGCCAACGAATGCAGCCCCAACTGTCCCAGGCCCTGTTGAGCCTCTTCTCCTGCCGCCTCCGCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616024.4
CDS CCA 72 bp CGGCGGAGGCGGCAGGAGAAGAGGCTCAACAGGGCCTaGGACAGTTGGGGCTGCATTCGTTGGCGGCAGCGG +
Preference number: 6 (lower is better)
Translates to: RRRRQEKRLNRA*DSWGCIRWRQR
Trigger: CCGCTGCCGCCAACGAATGCAGCCCCAACTGTCCCAGGCCCTGTTGAGCCTCTTCTCCTGCCGCCTCCGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000615321.1
CDS CCA 72 bp CGGCGGAGGCGGCAGGAGAAGAGGCTCAACAGGGCCTaGGACAGTTGGGGCTGCATTCGTTGGCGGCAGCGC +
Preference number: 6 (lower is better)
Translates to: RRRRQEKRLNRA*DSWGCIRWRQR
Trigger: GCGCTGCCGCCAACGAATGCAGCCCCAACTGTCCCAGGCCCTGTTGAGCCTCTTCTCCTGCCGCCTCCGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616024.4
CDS TCA 72 bp CCGCAGGAGCTGGGATCACCATCGGGGCCGCGGTGGTaGTGGTGCTTGTGCCGCTCCTTGTGGCCCTTATGC +
Preference number: 6 (lower is better)
Translates to: PQELGSPSGPRW*WCLCRSLWPLC
Trigger: GCATAAGGGCCACAAGGAGCGGCACAAGCACCATCACCACCGCGGCCCCGATGGTGATCCCAGCTCCTGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000615321.1
ENST00000616024.4
CDS GCA 72 bp GAGAAGAGGCTCAACAGGGCCTGGGACAGTTGGGGCTaGATTCGTTGGCGGCAGCGCTCCGACCTGCGCAGC +
Preference number: 6 (lower is better)
Translates to: EKRLNRAWDSWG*IRWRQRSDLRS
Trigger: GCTGCGCAGGTCGGAGCGCTGCCGCCAACGAATGCAGCCCCAACTGTCCCAGGCCCTGTTGAGCCTCTTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616024.4
CDS CCA 72 bp CGGCAGGAGAAGAGGCTCAACAGGGCCTGGGACAGTTaGGGCTGCATTCGTTGGCGGCAGCGGCCCAGGATG +
Preference number: 6 (lower is better)
Translates to: RQEKRLNRAWDS*GCIRWRQRPRM
Trigger: CATCCTGGGCCGCTGCCGCCAACGAATGCAGCCCCAACTGTCCCAGGCCCTGTTGAGCCTCTTCTCCTGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000615321.1
CDS CCA 72 bp GATGGTGCTTGTGCCGCTCCTTGTGGCCCTTATGCTTaGGCCCGGCCGCGCTCACCGTCAGAGGCGAGAAGG +
Preference number: 6 (lower is better)
Translates to: DGACAAPCGPYA*ARPRSPSEARR
Trigger: CCTTCTCGCCTCTGACGGTGAGCGCGGCCGGGCCCAAGCATAAGGGCCACAAGGAGCGGCACAAGCACCATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000615321.1
ENST00000616024.4
CDS CAA 72 bp GCGGCAGGAGAAGAGGCTCAACAGGGCCTGGGACAGTaGGGGCTGCATTCGTTGGCGGCAGCGGCCCAGGAT +
Preference number: 6 (lower is better)
Translates to: AAGEEAQQGLGQ*GLHSLAAAAQD
Trigger: ATCCTGGGCCGCTGCCGCCAACGAATGCAGCCCCAACTGTCCCAGGCCCTGTTGAGCCTCTTCTCCTGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000615321.1
CDS CAA 72 bp GCGGCAGGAGAAGAGGCTCAACAGGGCCTGGGACAGTaGGGGCTGCATTCGTTGGCGGCAGCGCTCCGACCT +
Preference number: 6 (lower is better)
Translates to: AAGEEAQQGLGQ*GLHSLAAALRP
Trigger: AGGTCGGAGCGCTGCCGCCAACGAATGCAGCCCCAACTGTCCCAGGCCCTGTTGAGCCTCTTCTCCTGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616024.4
CDS CAA 90 bp CGCGCACTGCCCGCTGGGCATTGGAGTCTCTCCTCCGCCCTCCACTaGTCGGCCGTTCTTCGTCCAGAGATGAACATGCCGGAAGCGGCC +
Preference number: 6 (lower is better)
Translates to: RALPAGHWSLSSALH*SAVLRPEMNMPEAA
Trigger: GGCCGCTTCCGGCATGTTCATCTCTGGACGAAGAACGGCCGACAAGTGGAGGGCGGAGGAGAGACTCCAATGCCCAGCGGGCAGTGCGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS GCA 72 bp GAGAAGAGGCTCAACAGGGCCTGGGACAGTTGGGGCTaGATTCGTTGGCGGCAGCGGCCCAGGATGTTGGCG +
Preference number: 6 (lower is better)
Translates to: EKRLNRAWDSWG*IRWRQRPRMLA
Trigger: CGCCAACATCCTGGGCCGCTGCCGCCAACGAATGCAGCCCCAACTGTCCCAGGCCCTGTTGAGCCTCTTCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000615321.1
CDS CAA 72 bp CCCGCTGGGCATTGGAGTCTCTCCTCCGCCCTCCACTaGTCGGCCGTTCTTCGTCCAGAGATGAACATGCCG +
Preference number: 6 (lower is better)
Translates to: PAGHWSLSSALH*SAVLRPEMNMP
Trigger: CGGCATGTTCATCTCTGGACGAAGAACGGCCGACAAGTGGAGGGCGGAGGAGAGACTCCAATGCCCAGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS TCA 72 bp CCGCCCTCCACTTGTCGGCCGTTCTTCGTCCAGAGATaGACATGCCGGAAGCGGCCGTTCCCAGCTTTTCTC +
Preference number: 6 (lower is better)
Translates to: PPSTCRPFFVQR*TCRKRPFPAFL
Trigger: GAGAAAAGCTGGGAACGGCCGCTTCCGGCATGTTCATCTCTGGACGAAGAACGGCCGACAAGTGGAGGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261441.9
ENST00000612242.4
CDS CAA 90 bp ATCAGAGGCACCCCTCCAGTCCTCTCGCCGTTTTCCTGCTTGTCCTaGTGCTTGAGATCGGTTCCGCAGGAGCTGGGATCACCATCGGGG +
Preference number: 6 (lower is better)
Translates to: IRGTPPVLSPFSCLS*CLRSVPQELGSPSG
Trigger: CCCCGATGGTGATCCCAGCTCCTGCGGAACCGATCTCAAGCACAAGGACAAGCAGGAAAACGGCGAGAGGACTGGAGGGGTGCCTCTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000615321.1
ENST00000616024.4
CDS TCA 72 bp CAGTCCTCTCGCCGTTTTCCTGCTTGTCCTTGTGCTTaGGATCGGTTCCGCAGGAGCTGGGATCACCATCGG +
Preference number: 6 (lower is better)
Translates to: QSSRRFPACPCA*DRFRRSWDHHR
Trigger: CCGATGGTGATCCCAGCTCCTGCGGAACCGATCTCAAGCACAAGGACAAGCAGGAAAACGGCGAGAGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000615321.1
ENST00000616024.4
CDS GCA 72 bp ATCAGAGGCACCCCTCCAGTCCTCTCGCCGTTTTCCTaGTTGTCCTTGTGCTTGAGATCGGTTCCGCAGGAG +
Preference number: 6 (lower is better)
Translates to: IRGTPPVLSPFS*LSLCLRSVPQE
Trigger: CTCCTGCGGAACCGATCTCAAGCACAAGGACAAGCAGGAAAACGGCGAGAGGACTGGAGGGGTGCCTCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000615321.1
ENST00000616024.4
CDS CAA 72 bp CCAGTCCTCTCGCCGTTTTCCTGCTTGTCCTTGTGCTaGAGATCGGTTCCGCAGGAGCTGGGATCACCATCG +
Preference number: 6 (lower is better)
Translates to: PVLSPFSCLSLC*RSVPQELGSPS
Trigger: CGATGGTGATCCCAGCTCCTGCGGAACCGATCTCAAGCACAAGGACAAGCAGGAAAACGGCGAGAGGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000615321.1
ENST00000616024.4
CDS CAA 72 bp ACCCCTCCAGTCCTCTCGCCGTTTTCCTGCTTGTCCTaGTGCTTGAGATCGGTTCCGCAGGAGCTGGGATCA +
Preference number: 6 (lower is better)
Translates to: TPPVLSPFSCLS*CLRSVPQELGS
Trigger: TGATCCCAGCTCCTGCGGAACCGATCTCAAGCACAAGGACAAGCAGGAAAACGGCGAGAGGACTGGAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000615321.1
ENST00000616024.4
CDS CAA 90 bp TTACTGATGCGGGTCAGGCCAGCACAGACGGTTTGTACTTCCTTATaGTACATTTTAAGGCGTCTTCCTCGCATGTCTTCTCGGTGTTTC +
Preference number: 6 (lower is better)
Translates to: LLMRVRPAQTVCTSL*YILRRLPRMSSRCF
Trigger: GAAACACCGAGAAGACATGCGAGGAAGACGCCTTAAAATGTACAATAAGGAAGTACAAACCGTCTGTGCTGGCCTGACCCGCATCAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000615321.1
ENST00000616024.4
CDS CAA 90 bp GGTGAGAATTTCTTTACTGATGCGGGTCAGGCCAGCACAGACGGTTaGTACTTCCTTATTGTACATTTTAAGGCGTCTTCCTCGCATGTC +
Preference number: 6 (lower is better)
Translates to: GENFFTDAGQASTDG*YFLIVHFKASSSHV
Trigger: GACATGCGAGGAAGACGCCTTAAAATGTACAATAAGGAAGTACAAACCGTCTGTGCTGGCCTGACCCGCATCAGTAAAGAAATTCTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000615321.1
ENST00000616024.4
CDS CAA 72 bp TCACTCCAGAGCCTGGGGGTGAGAGTAAAAGAGGAATaGTTGTTCAGTGAGTATAGAGTTACAGCCTCGCAA +
Preference number: 6 (lower is better)
Translates to: SLQSLGVRVKEE*LFSEYRVTASQ
Trigger: TTGCGAGGCTGTAACTCTATACTCACTGAACAACAATTCCTCTTTTACTCTCACCCCCAGGCTCTGGAGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369581.2
CDS CAA 72 bp TTCTTTACTGATGCGGGTCAGGCCAGCACAGACGGTTaGTACTTCCTTATTGTACATTTTAAGGCGTCTTCC +
Preference number: 6 (lower is better)
Translates to: FFTDAGQASTDG*YFLIVHFKASS
Trigger: GGAAGACGCCTTAAAATGTACAATAAGGAAGTACAAACCGTCTGTGCTGGCCTGACCCGCATCAGTAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000615321.1
ENST00000616024.4
CDS GCA 72 bp AAAGGTGTTTGTACTCCCTGGGGTACCCGATATTCTTaGATACCCAAATTTAATCGGCACAGCTGTTCATCT +
Preference number: 6 (lower is better)
Translates to: KGVCTPWGTRYS*IPKFNRHSCSS
Trigger: AGATGAACAGCTGTGCCGATTAAATTTGGGTATGCAAGAATATCGGGTACCCCAGGGAGTACAAACACCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000615321.1
ENST00000616024.4
CDS TCA 72 bp CTCAGAAAATCTCTCCATCTCCATTGGAGACAAAAATaGGAGTTCATCCATGTAAGCATGAAGGACAAGAGC +
Preference number: 6 (lower is better)
Translates to: LRKSLHLHWRQK*EFIHVSMKDKS
Trigger: GCTCTTGTCCTTCATGCTTACATGGATGAACTCTCATTTTTGTCTCCAATGGAGATGGAGAGATTTTCTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000615321.1
ENST00000616024.4
CDS CCA 72 bp TCCTTATTAAGTCCTGAAGTGCTATTTATTTGTCCTTaGGTGAGAATTTCTTTACTGATGCGGGTCAGGCCA +
Preference number: 6 (lower is better)
Translates to: SLLSPEVLFICP*VRISLLMRVRP
Trigger: TGGCCTGACCCGCATCAGTAAAGAAATTCTCACCCAAGGACAAATAAATAGCACTTCAGGACTTAATAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000615321.1
ENST00000616024.4
CDS CAA 72 bp AGAAGTCTGGGAGATAAGCAGCCGCTCCATGCACTATaGCTAAAGCATAGTAAGCAGCATTTTTCTCATTTT +
Preference number: 6 (lower is better)
Translates to: RSLGDKQPLHAL*LKHSKQHFSHF
Trigger: AAAATGAGAAAAATGCTGCTTACTATGCTTTAGCAATAGTGCATGGAGCGGCTGCTTATCTCCCAGACTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261441.9
ENST00000476412.5
ENST00000612242.4
ENST00000615321.1
ENST00000616024.4