RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RSAD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000136444

Ensembl transcript IDs: ENST00000258955.7, ENST00000443328.2, ENST00000504284.1, ENST00000506211.1, ENST00000509398.1, ENST00000510554.1, ENST00000513650.1, ENST00000515221.2

Found 272 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGGGGCTGGAAGGGCACCCCGCTGCACCTGGGCGAAGAGTGCGGTaGCCCGCTCCAGGGACAGCTGGTAGAGGGAGAGGTGGTCATCAC +
Preference number: 1 (lower is better)
Translates to: QGLEGHPAAPGRRVR*PAPGTAGRGRGGHH
Trigger: GTGATGACCACCTCTCCCTCTACCAGCTGTCCCTGGAGCGGGGCACCGCACTCTTCGCCCAGGTGCAGCGGGGTGCCCTTCCAGCCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504284.1
3UTR GCA 90 bp CATCAAGTCTACAGACACGCGCCCGGGAAAGAGGCGCCGGGCCTCTaGCAGCGTCCGCAGAGCATCGCAGGCCGAGTGCGTCCGTCCCAA +
Preference number: 1 (lower is better)
Translates to: HQVYRHAPGKEAPGL*QRPQSIAGRVRPSQ
Trigger: TTGGGACGGACGCACTCGGCCTGCGATGCTCTGCGGACGCTGGCAGAGGCCCGGCGCCTCTTTCCCGGGCGCGTGTCTGTAGACTTGATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504284.1
3UTR CCA 90 bp TGGGTACTGAGCGCCCCATTCCGGGCAAAGTTGGAGACCTCATACTaGTGGAAGCCAGCCTCCCGAAGGACAGCCCGGCCCCTCTGGTAC +
Preference number: 1 (lower is better)
Translates to: WVLSAPFRAKLETSY*WKPASRRTARPLWY
Trigger: GTACCAGAGGGGCCGGGCTGTCCTTCGGGAGGCTGGCTTCCACCAGTATGAGGTCTCCAACTTTGCCCGGAATGGGGCGCTCAGTACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504284.1
3UTR GCA 90 bp CTTCCTCCAGCAGCTCCAGCCTGCCCAGGGGGACACGCTTCCGGGTaGCATGGCCAAACAGCATCACCTCCTTCATCCAGTTGTCAGGCT +
Preference number: 1 (lower is better)
Translates to: LPPAAPACPGGHASG*HGQTASPPSSSCQA
Trigger: AGCCTGACAACTGGATGAAGGAGGTGATGCTGTTTGGCCATGGCACCCGGAAGCGTGTCCCCCTGGGCAGGCTGGAGCTGCTGGAGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504284.1
3UTR CCA 90 bp GTACTGAGCGCCCCATTCCGGGCAAAGTTGGAGACCTCATACTGGTaGAAGCCAGCCTCCCGAAGGACAGCCCGGCCCCTCTGGTACATC +
Preference number: 1 (lower is better)
Translates to: VLSAPFRAKLETSYW*KPASRRTARPLWYI
Trigger: GATGTACCAGAGGGGCCGGGCTGTCCTTCGGGAGGCTGGCTTCCACCAGTATGAGGTCTCCAACTTTGCCCGGAATGGGGCGCTCAGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504284.1
3UTR CCA 90 bp CCAAACAGCATCACCTCCTTCATCCAGTTGTCAGGCTCCAGTGTCTaGATCCGAGCCTCCCGGGTGTGGCCTCCAGCCCCCTGGGGCATA +
Preference number: 1 (lower is better)
Translates to: PNSITSFIQLSGSSV*IRASRVWPPAPWGI
Trigger: TATGCCCCAGGGGGCTGGAGGCCACACCCGGGAGGCTCGGATCCAGACACTGGAGCCTGACAACTGGATGAAGGAGGTGATGCTGTTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504284.1
3UTR CCA 90 bp TCCAGCAGCTCCAGCCTGCCCAGGGGGACACGCTTCCGGGTGCCATaGCCAAACAGCATCACCTCCTTCATCCAGTTGTCAGGCTCCAGT +
Preference number: 1 (lower is better)
Translates to: SSSSSLPRGTRFRVP*PNSITSFIQLSGSS
Trigger: ACTGGAGCCTGACAACTGGATGAAGGAGGTGATGCTGTTTGGCCATGGCACCCGGAAGCGTGTCCCCCTGGGCAGGCTGGAGCTGCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504284.1
3UTR TCA 90 bp CTCCCATCTACCTCACTGCTGCCATTCCCCTGGGGATGCCAGGGCTaGGCAATAACCACAAGGAGCAGAGACGGCACCCGACAACGGAGA +
Preference number: 1 (lower is better)
Translates to: LPSTSLLPFPWGCQG*AITTRSRDGTRQRR
Trigger: TCTCCGTTGTCGGGTGCCGTCTCTGCTCCTTGTGGTTATTGCTCAGCCCTGGCATCCCCAGGGGAATGGCAGCAGTGAGGTAGATGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258955.7
3UTR GCA 90 bp ACCACAAGGAGCAGAGACGGCACCCGACAACGGAGAAGAGATGTCTaGAGTACCGACCCAGCTCTCAAAACCCACCTGGCATTACCCTGG +
Preference number: 1 (lower is better)
Translates to: TTRSRDGTRQRRRDV*STDPALKTHLALPW
Trigger: CCAGGGTAATGCCAGGTGGGTTTTGAGAGCTGGGTCGGTACTGCAGACATCTCTTCTCCGTTGTCGGGTGCCGTCTCTGCTCCTTGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258955.7
ENST00000506211.1
3UTR TCA 90 bp TGTTGGCCTGTGAGTCCTGAGATGCTGAATGGGATGCCAGTTCCCTaGCCAGAAATGTCCTCCCATCTACCTCACTGCTGCCATTCCCCT +
Preference number: 1 (lower is better)
Translates to: CWPVSPEMLNGMPVP*PEMSSHLPHCCHSP
Trigger: AGGGGAATGGCAGCAGTGAGGTAGATGGGAGGACATTTCTGGTCAGGGAACTGGCATCCCATTCAGCATCTCAGGACTCACAGGCCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258955.7
3UTR TCA 90 bp GGTAGGCAATTCCCAGCCATGGAACACATGTTGGCCTGTGAGTCCTaGGATGCTGAATGGGATGCCAGTTCCCTGACCAGAAATGTCCTC +
Preference number: 1 (lower is better)
Translates to: GRQFPAMEHMLACES*DAEWDASSLTRNVL
Trigger: GAGGACATTTCTGGTCAGGGAACTGGCATCCCATTCAGCATCTCAGGACTCACAGGCCAACATGTGTTCCATGGCTGGGAATTGCCTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258955.7
3UTR GCA 90 bp CCACCCCAAACATATTCTGGTTTCCCGAAGATAAGAGGCAAGGCTTaGTCTGATCTTTCCCAGTTCTCAGAGTCCAGCAGGCCGCTGTGC +
Preference number: 1 (lower is better)
Translates to: PPQTYSGFPKIRGKA*SDLSQFSESSRPLC
Trigger: GCACAGCGGCCTGCTGGACTCTGAGAACTGGGAAAGATCAGAGCAAGCCTTGCCTCTTATCTTCGGGAAACCAGAATATGTTTGGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258955.7
3UTR TCA 90 bp CCAAACATATTCTGGTTTCCCGAAGATAAGAGGCAAGGCTTGCTCTaGTCTTTCCCAGTTCTCAGAGTCCAGCAGGCCGCTGTGCTGGAC +
Preference number: 1 (lower is better)
Translates to: PNIFWFPEDKRQGLL*SFPVLRVQQAAVLD
Trigger: GTCCAGCACAGCGGCCTGCTGGACTCTGAGAACTGGGAAAGATCAGAGCAAGCCTTGCCTCTTATCTTCGGGAAACCAGAATATGTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258955.7
3UTR GCA 90 bp GCTTGCTCTGATCTTTCCCAGTTCTCAGAGTCCAGCAGGCCGCTGTaGTGGACACATACATGGATCCACCAACATACATCAGTCCTTCTG +
Preference number: 1 (lower is better)
Translates to: ACSDLSQFSESSRPL*WTHTWIHQHTSVLL
Trigger: CAGAAGGACTGATGTATGTTGGTGGATCCATGTATGTGTCCAGCACAGCGGCCTGCTGGACTCTGAGAACTGGGAAAGATCAGAGCAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258955.7
3UTR CCA 90 bp TCCCAGTTCTCAGAGTCCAGCAGGCCGCTGTGCTGGACACATACATaGATCCACCAACATACATCAGTCCTTCTGTGTTCTCTCCTGCAT +
Preference number: 1 (lower is better)
Translates to: SQFSESSRPLCWTHT*IHQHTSVLLCSLLH
Trigger: ATGCAGGAGAGAACACAGAAGGACTGATGTATGTTGGTGGATCCATGTATGTGTCCAGCACAGCGGCCTGCTGGACTCTGAGAACTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258955.7
3UTR CCA 90 bp GGAGAAGAGATGTCTGCAGTACCGACCCAGCTCTCAAAACCCACCTaGCATTACCCTGGAACACAGGAACATTTTTGTCATCCTCCTGGC +
Preference number: 1 (lower is better)
Translates to: GEEMSAVPTQLSKPT*HYPGTQEHFCHPPG
Trigger: GCCAGGAGGATGACAAAAATGTTCCTGTGTTCCAGGGTAATGCCAGGTGGGTTTTGAGAGCTGGGTCGGTACTGCAGACATCTCTTCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506211.1
3UTR CCA 90 bp TGCTCTGATCTTTCCCAGTTCTCAGAGTCCAGCAGGCCGCTGTGCTaGACACATACATGGATCCACCAACATACATCAGTCCTTCTGTGT +
Preference number: 1 (lower is better)
Translates to: CSDLSQFSESSRPLC*THTWIHQHTSVLLC
Trigger: ACACAGAAGGACTGATGTATGTTGGTGGATCCATGTATGTGTCCAGCACAGCGGCCTGCTGGACTCTGAGAACTGGGAAAGATCAGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258955.7
3UTR GCA 90 bp TGCTGCTGGAAGCTGAGACCATCAGCAGGAGTTTTCTGTGCCTCCTaGAAGTTGCTGATTTCTCACAGTTGCTACTGGCTTTCTCCAATG +
Preference number: 1 (lower is better)
Translates to: CCWKLRPSAGVFCAS*KLLISHSCYWLSPM
Trigger: CATTGGAGAAAGCCAGTAGCAACTGTGAGAAATCAGCAACTTGCAGGAGGCACAGAAAACTCCTGCTGATGGTCTCAGCTTCCAGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258955.7
3UTR CCA 90 bp CAACATACATCAGTCCTTCTGTGTTCTCTCCTGCATGGTAGAGGCTaGAAGCCTAAGAGCTATATTCCTCAGAATTTCCTGCCAGCCAGG +
Preference number: 1 (lower is better)
Translates to: QHTSVLLCSLLHGRG*KPKSYIPQNFLPAR
Trigger: CCTGGCTGGCAGGAAATTCTGAGGAATATAGCTCTTAGGCTTCCAGCCTCTACCATGCAGGAGAGAACACAGAAGGACTGATGTATGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258955.7
3UTR GCA 90 bp ATGGTAGAGGCTGGAAGCCTAAGAGCTATATTCCTCAGAATTTCCTaGCAGCCAGGATTTGCTTTAAAGTCCACTAATGAGAGGCACTTC +
Preference number: 1 (lower is better)
Translates to: MVEAGSLRAIFLRIS*QPGFALKSTNERHF
Trigger: GAAGTGCCTCTCATTAGTGGACTTTAAAGCAAATCCTGGCTGGCAGGAAATTCTGAGGAATATAGCTCTTAGGCTTCCAGCCTCTACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258955.7
3UTR GCA 90 bp ATACATGGATCCACCAACATACATCAGTCCTTCTGTGTTCTCTCCTaGATGGTAGAGGCTGGAAGCCTAAGAGCTATATTCCTCAGAATT +
Preference number: 1 (lower is better)
Translates to: IHGSTNIHQSFCVLS*MVEAGSLRAIFLRI
Trigger: AATTCTGAGGAATATAGCTCTTAGGCTTCCAGCCTCTACCATGCAGGAGAGAACACAGAAGGACTGATGTATGTTGGTGGATCCATGTAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258955.7
3UTR-3UTR GCA 90 bp GGTGGAAGCCAGCCTCCCGAAGGACAGCCCGGCCCCTCTGGTACATCTCAGCTGGGGCGAAGAGTGCGGTaGCCCGCTCCAGGGACAGCT +
Preference number: 2 (lower is better)
Translates to: GGSQPPEGQPGPSGTSQLGRRVR*PAPGTA
Trigger: AGCTGTCCCTGGAGCGGGGCACCGCACTCTTCGCCC...CAGCTGAGATGTACCAGAGGGGCCGGGCTGTCCTTCGGGAGGCTGGCTTCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504284.1
3UTR-3UTR GCA 90 bp AGCGCCCCATTCCGGGCAAAGTTGGAGACCTCATACTGGTGGAAGCCAGCCTCCAGCCACGGCCCCACCTaGTGTGCCGGCAGCCCCAGC +
Preference number: 2 (lower is better)
Translates to: SAPFRAKLETSYWWKPASSHGPT*CAGSPS
Trigger: GCTGGGGCTGCCGGCACAGCAGGTGGGGCCGTGGCT...GGAGGCTGGCTTCCACCAGTATGAGGTCTCCAACTTTGCCCGGAATGGGGCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000504284.1
3UTR-3UTR GCA 90 bp GGAGCTGAGGCAGGAGGGTCAGCAAGAGAGAGTCCAGCACAGCCAGACCCTCCCCAGGGCTCCCTGGTATaGCTCAGCCCCCTCTGCCCG +
Preference number: 2 (lower is better)
Translates to: GAEAGGSARESPAQPDPPQGSLV*LSPLCP
Trigger: CGGGCAGAGGGGGCTGAGGCATACCAGGGAGCCCTG...GGGAGGGTCTGGCTGTGCTGGACTCTCTCTTGCTGACCCTCCTGCCTCAGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515221.2
3UTR-3UTR GCA 90 bp CTTCATCCAGTTGTCAGGCTCCAGTGTCTGGATCCGAGCCTCCCGGGTGTGGCCCACCTGGGCGAAGAGTaGGGTGCCCCGCTCCAGGGA +
Preference number: 2 (lower is better)
Translates to: LHPVVRLQCLDPSLPGVAHLGEE*GAPLQG
Trigger: TCCCTGGAGCGGGGCACCGCACTCTTCGCCCAGGTG...GGCCACACCCGGGAGGCTCGGATCCAGACACTGGAGCCTGACAACTGGATGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504284.1
3UTR-3UTR GCA 90 bp GCCTGCCCAGGGGGACACGCTTCCGGGTGCCATGGCCAAACAGCATCACCTCCTGGGGAGGGGGTTCTCTaGTGCCAGGCTTCTTGGAGC +
Preference number: 2 (lower is better)
Translates to: ACPGGHASGCHGQTASPPGEGVL*CQASWS
Trigger: GCTCCAAGAAGCCTGGCAGCAGAGAACCCCCTCCCC...AGGAGGTGATGCTGTTTGGCCATGGCACCCGGAAGCGTGTCCCCCTGGGCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000515221.2
3UTR-3UTR GCA 90 bp CACATCCCACAGGGTCAGCTGGGGCTCAAACTGCTGCCAGTGCTGGTGAGTGATGCATCGCAGGCCGAGTaGGTCCGTCCCAACAGCCGG +
Preference number: 2 (lower is better)
Translates to: HIPQGQLGLKLLPVLVSDASQAE*VRPNSR
Trigger: CCGGCTGTTGGGACGGACGCACTCGGCCTGCGATGC...ATCACTCACCAGCACTGGCAGCAGTTTGAGCCCCAGCTGACCCTGTGGGATGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504284.1
3UTR-3UTR GCA 90 bp GGAGCTGAGGCAGGAGGGTCAGCAAGAGAGAGTCCAGCACAGCCAGACCCTCCCCGCTCCAGCAGCTCCTaGACCTCCTTGTTCGCTCCA +
Preference number: 2 (lower is better)
Translates to: GAEAGGSARESPAQPDPPRSSSS*TSLFAP
Trigger: TGGAGCGAACAAGGAGGTGCAGGAGCTGCTGGAGCG...GGGAGGGTCTGGCTGTGCTGGACTCTCTCTTGCTGACCCTCCTGCCTCAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504284.1
ENST00000506211.1
ENST00000515221.2
3UTR-3UTR CCA 90 bp GCCAGCCTCCCGAAGGACAGCCCGGCCCCTCTGGTACATCTCAGCTGCGAGCTCAGGTGGTCATCACAGTaGTGCAGCAGTTCCTGCAGC +
Preference number: 2 (lower is better)
Translates to: ASLPKDSPAPLVHLSCELRWSSQ*CSSSCS
Trigger: GCTGCAGGAACTGCTGCACCACTGTGATGACCACCT...GAGCTCGCAGCTGAGATGTACCAGAGGGGCCGGGCTGTCCTTCGGGAGGCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504284.1
3UTR-3UTR TCA 90 bp AGCAGCTCCTGCACCTCCTTGTTCGCTCCAAACACATCCCACAGGGTCAGCTGGTCAAACTGCTGCCAGTaGGCTCCAGCCTGCCCAGGG +
Preference number: 2 (lower is better)
Translates to: SSSCTSLFAPNTSHRVSWSNCCQ*APACPG
Trigger: CCCTGGGCAGGCTGGAGCTCACTGGCAGCAGTTTGA...CCAGCTGACCCTGTGGGATGTGTTTGGAGCGAACAAGGAGGTGCAGGAGCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515221.2
3UTR-3UTR GCA 90 bp GTGCCATGGCCAAACAGCATCACCTCCTTCATCCAGTTGTCAGGCTCCAGTGTCAGCAGTTCCTGCAGCTaGCCAAGCCACGGCCCCACC +
Preference number: 2 (lower is better)
Translates to: VPWPNSITSFIQLSGSSVSSSCS*PSHGPT
Trigger: GGTGGGGCCGTGGCTTGGGCAGCTGCAGGAACTGCT...GACACTGGAGCCTGACAACTGGATGAAGGAGGTGATGCTGTTTGGCCATGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504284.1
3UTR-3UTR TCA 90 bp CTTCCGGGTGCCATGGCCAAACAGCATCACCTCCTTCATCCAGTTGTCAGGCTCTCCAATTGTGGGTACTaGGCGCCCCATTCCGGGCAA +
Preference number: 2 (lower is better)
Translates to: LPGAMAKQHHLLHPVVRLSNCGY*APHSGQ
Trigger: TTGCCCGGAATGGGGCGCTCAGTACCCACAATTGGA...GAGCCTGACAACTGGATGAAGGAGGTGATGCTGTTTGGCCATGGCACCCGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504284.1
3UTR-3UTR TCA 90 bp GGGGCTCAGAAGAGTCTGTGTGGCTCCTACCACCCCAAACATATTCTGGTTTCCTGGGGATGCCAGGGCTaGGCAATAACCACAAGGAGC +
Preference number: 2 (lower is better)
Translates to: GAQKSLCGSYHPKHILVSWGCQG*AITTRS
Trigger: GCTCCTTGTGGTTATTGCTCAGCCCTGGCATCCCCA...GGAAACCAGAATATGTTTGGGGTGGTAGGAGCCACACAGACTCTTCTGAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258955.7
3UTR-3UTR GCA 90 bp TGGGTGGTAGGCAATTCCCAGCCATGGAACACATGTTGGCCTGTGAGTCCTGAGCGGAGAAGAGATGTCTaGAGTACCGACCCAGCTCTC +
Preference number: 2 (lower is better)
Translates to: WVVGNSQPWNTCWPVSPERRRDV*STDPAL
Trigger: GAGAGCTGGGTCGGTACTGCAGACATCTCTTCTCCG...CTCAGGACTCACAGGCCAACATGTGTTCCATGGCTGGGAATTGCCTACCACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258955.7
3UTR-3UTR GCA 90 bp CGACAACGGAGAAGAGATGTCTGCAGTACCGACCCAGCTCTCAAAACCCACCTGTCCCATCTACCTCACTaGTGCCATTCCCCTGGGGAT +
Preference number: 2 (lower is better)
Translates to: RQRRRDVCSTDPALKTHLSHLPH*CHSPGD
Trigger: ATCCCCAGGGGAATGGCAGCAGTGAGGTAGATGGGA...CAGGTGGGTTTTGAGAGCTGGGTCGGTACTGCAGACATCTCTTCTCCGTTGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258955.7
3UTR-3UTR CCA 90 bp GTCTGCAGTACCGACCCAGCTCTCAAAACCCACCTGGCATTACCCTGGAACACACTCTCAAAACCCACCTaGCATTACCCTGGAACACAG +
Preference number: 2 (lower is better)
Translates to: VCSTDPALKTHLALPWNTLSKPT*HYPGTQ
Trigger: CTGTGTTCCAGGGTAATGCCAGGTGGGTTTTGAGAG...TGTGTTCCAGGGTAATGCCAGGTGGGTTTTGAGAGCTGGGTCGGTACTGCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258955.7
ENST00000506211.1
3UTR-3UTR GCA 90 bp TGGATCCACCAACATACATCAGTCCTTCTGTGTTCTCTCCTGCATGGTAGAGGCCATCATCTGCTTTTGTaGTGCTGGAAGCTGAGACCA +
Preference number: 2 (lower is better)
Translates to: WIHQHTSVLLCSLLHGRGHHLLL*CWKLRP
Trigger: TGGTCTCAGCTTCCAGCAGCACAAAAGCAGATGATG...GCCTCTACCATGCAGGAGAGAACACAGAAGGACTGATGTATGTTGGTGGATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258955.7
3UTR-3UTR TCA 90 bp AGAGCTATATTCCTCAGAATTTCCTGCCAGCCAGGATTTGCTTTAAAGTCCACTTTGGCCTGTGAGTCCTaGGATGCTGAATGGGATGCC +
Preference number: 2 (lower is better)
Translates to: RAIFLRISCQPGFALKSTLACES*DAEWDA
Trigger: GGCATCCCATTCAGCATCTCAGGACTCACAGGCCAA...AGTGGACTTTAAAGCAAATCCTGGCTGGCAGGAAATTCTGAGGAATATAGCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258955.7
3UTR-3UTR GCA 90 bp GCTCCTACCACCCCAAACATATTCTGGTTTCCCGAAGATAAGAGGCAAGGCTTGTTCCAGTACATCATCTaGTTTTGTGCTGCTGGAAGC +
Preference number: 2 (lower is better)
Translates to: APTTPNIFWFPEDKRQGLFQYII*FCAAGS
Trigger: GCTTCCAGCAGCACAAAAGCAGATGATGTACTGGAA...CAAGCCTTGCCTCTTATCTTCGGGAAACCAGAATATGTTTGGGGTGGTAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258955.7
3UTR-3UTR TCA 90 bp GACATGGTTTTCCTGATTCATCCAGCTATCTTAGGACCTTACTCCAAAATAAGGGGGATGCCAGTTCCCTaGCCAGAAATGTCCTCCCAT +
Preference number: 2 (lower is better)
Translates to: DMVFLIHPAILGPYSKIRGMPVP*PEMSSH
Trigger: ATGGGAGGACATTTCTGGTCAGGGAACTGGCATCCC...CCTTATTTTGGAGTAAGGTCCTAAGATAGCTGGATGAATCAGGAAAACCATGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000258955.7
3UTR-3UTR CCA 90 bp CTAAGAGCTATATTCCTCAGAATTTCCTGCCAGCCAGGATTTGCTTTAAAGTCCCCATGGAACACATGTTaGCCTGTGAGTCCTGAGATG +
Preference number: 2 (lower is better)
Translates to: LRAIFLRISCQPGFALKSPWNTC*PVSPEM
Trigger: CATCTCAGGACTCACAGGCCAACATGTGTTCCATGG...GGACTTTAAAGCAAATCCTGGCTGGCAGGAAATTCTGAGGAATATAGCTCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258955.7
3UTR-3UTR CCA 90 bp GTTTTCCTGATTCATCCAGCTATCTTAGGACCTTACTCCAAAATAAGGAAGGCTGGCAATTCCCAGCCATaGAACACATGTTGGCCTGTG +
Preference number: 2 (lower is better)
Translates to: VFLIHPAILGPYSKIRKAGNSQP*NTCWPV
Trigger: CACAGGCCAACATGTGTTCCATGGCTGGGAATTGCC...AGCCTTCCTTATTTTGGAGTAAGGTCCTAAGATAGCTGGATGAATCAGGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258955.7
3UTR-3UTR CCA 90 bp GACATGGTTTTCCTGATTCATCCAGCTATCTTAGGACCTTACTCCAAAATAAGGAAACAGAAGCTGATGTaGGTGGTAGGCAATTCCCAG +
Preference number: 2 (lower is better)
Translates to: DMVFLIHPAILGPYSKIRKQKLM*VVGNSQ
Trigger: CTGGGAATTGCCTACCACCCACATCAGCTTCTGTTT...CCTTATTTTGGAGTAAGGTCCTAAGATAGCTGGATGAATCAGGAAAACCATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258955.7
3UTR-3UTR GCA 90 bp CTAAGAGCTATATTCCTCAGAATTTCCTGCCAGCCAGGATTTGCTTTAAAGTCCCTGATTTCTCACAGTTaGTACTGGCTTTCTCCAATG +
Preference number: 2 (lower is better)
Translates to: LRAIFLRISCQPGFALKSLISHS*YWLSPM
Trigger: CATTGGAGAAAGCCAGTAGCAACTGTGAGAAATCAG...GGACTTTAAAGCAAATCCTGGCTGGCAGGAAATTCTGAGGAATATAGCTCTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258955.7
3UTR-3UTR CCA 90 bp ATAGTAGATCCCTTCCTGCTTATATTAATAATACCTAGAGGGGACATGGTTTTCCTCTCAAAACCCACCTaGCATTACCCTGGAACACAG +
Preference number: 2 (lower is better)
Translates to: IVDPFLLILIIPRGDMVFLSKPT*HYPGTQ
Trigger: CTGTGTTCCAGGGTAATGCCAGGTGGGTTTTGAGAG...GAAAACCATGTCCCCTCTAGGTATTATTAATATAAGCAGGAAGGGATCTACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258955.7
3UTR GCA 72 bp GAAGGGCACCCCGCTGCACCTGGGCGAAGAGTGCGGTaGCCCGCTCCAGGGACAGCTGGTAGAGGGAGAGGT +
Preference number: 3 (lower is better)
Translates to: EGHPAAPGRRVR*PAPGTAGRGRG
Trigger: ACCTCTCCCTCTACCAGCTGTCCCTGGAGCGGGGCACCGCACTCTTCGCCCAGGTGCAGCGGGGTGCCCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504284.1
3UTR CCA 72 bp TGGAAGCCAGCCTCCCGAAGGACAGCCCGGCCCCTCTaGTACATCTCAGCTGCGAGCTCCGGGTCAGGGGCT +
Preference number: 3 (lower is better)
Translates to: WKPASRRTARPL*YISAASSGSGA
Trigger: AGCCCCTGACCCGGAGCTCGCAGCTGAGATGTACCAGAGGGGCCGGGCTGTCCTTCGGGAGGCTGGCTTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504284.1
3UTR-3UTR CAA 90 bp GCCTGCCCAGGGGGACACGCTTCCGGGTGCCATGGCCAAACAGCATCACCTCCTCTGCTGCCAGGCTTCTaGGAGCTGAGGCAGGAGGGT +
Preference number: 3 (lower is better)
Translates to: ACPGGHASGCHGQTASPPLLPGF*ELRQEG
Trigger: ACCCTCCTGCCTCAGCTCCAAGAAGCCTGGCAGCAG...AGGAGGTGATGCTGTTTGGCCATGGCACCCGGAAGCGTGTCCCCCTGGGCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515221.2
3UTR CCA 72 bp AGCGCCCCATTCCGGGCAAAGTTGGAGACCTCATACTaGTGGAAGCCAGCCTCCCGAAGGACAGCCCGGCCC +
Preference number: 3 (lower is better)
Translates to: SAPFRAKLETSY*WKPASRRTARP
Trigger: GGGCCGGGCTGTCCTTCGGGAGGCTGGCTTCCACCAGTATGAGGTCTCCAACTTTGCCCGGAATGGGGCGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504284.1
3UTR CCA 72 bp TCAGGCTCCAGTGTCTGGATCCGAGCCTCCCGGGTGTaGCCTCCAGCCCCCTGGGGCATAAATCGTCCATGG +
Preference number: 3 (lower is better)
Translates to: SGSSVWIRASRV*PPAPWGINRPW
Trigger: CCATGGACGATTTATGCCCCAGGGGGCTGGAGGCCACACCCGGGAGGCTCGGATCCAGACACTGGAGCCTGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504284.1
3UTR GCA 72 bp GCAGCTCCAGCCTGCCCAGGGGGACACGCTTCCGGGTaGCATGGCCAAACAGCATCACCTCCTTCATCCAGT +
Preference number: 3 (lower is better)
Translates to: AAPACPGGHASG*HGQTASPPSSS
Trigger: ACTGGATGAAGGAGGTGATGCTGTTTGGCCATGGCACCCGGAAGCGTGTCCCCCTGGGCAGGCTGGAGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504284.1
3UTR CCA 72 bp ATCACCTCCTTCATCCAGTTGTCAGGCTCCAGTGTCTaGATCCGAGCCTCCCGGGTGTGGCCTCCAGCCCCC +
Preference number: 3 (lower is better)
Translates to: ITSFIQLSGSSV*IRASRVWPPAP
Trigger: GGGGGCTGGAGGCCACACCCGGGAGGCTCGGATCCAGACACTGGAGCCTGACAACTGGATGAAGGAGGTGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504284.1
3UTR CCA 72 bp TCCAGCCTGCCCAGGGGGACACGCTTCCGGGTGCCATaGCCAAACAGCATCACCTCCTTCATCCAGTTGTCA +
Preference number: 3 (lower is better)
Translates to: SSLPRGTRFRVP*PNSITSFIQLS
Trigger: TGACAACTGGATGAAGGAGGTGATGCTGTTTGGCCATGGCACCCGGAAGCGTGTCCCCCTGGGCAGGCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504284.1
3UTR-3UTR CAA 90 bp CTTCATCCAGTTGTCAGGCTCCAGTGTCTGGATCCGAGCCTCCCGGGTGTGGCCCCATTCCGGGCAAAGTaGGAGACCTCATACTGGTGG +
Preference number: 3 (lower is better)
Translates to: LHPVVRLQCLDPSLPGVAPFRAK*ETSYWW
Trigger: CCACCAGTATGAGGTCTCCAACTTTGCCCGGAATGG...GGCCACACCCGGGAGGCTCGGATCCAGACACTGGAGCCTGACAACTGGATGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504284.1
3UTR GCA 72 bp AGCAGAGACGGCACCCGACAACGGAGAAGAGATGTCTaGAGTACCGACCCAGCTCTCAAAACCCACCTGGCA +
Preference number: 3 (lower is better)
Translates to: SRDGTRQRRRDV*STDPALKTHLA
Trigger: TGCCAGGTGGGTTTTGAGAGCTGGGTCGGTACTGCAGACATCTCTTCTCCGTTGTCGGGTGCCGTCTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258955.7
ENST00000506211.1
3UTR TCA 72 bp TTCCCAGCCATGGAACACATGTTGGCCTGTGAGTCCTaGGATGCTGAATGGGATGCCAGTTCCCTGACCAGA +
Preference number: 3 (lower is better)
Translates to: FPAMEHMLACES*DAEWDASSLTR
Trigger: TCTGGTCAGGGAACTGGCATCCCATTCAGCATCTCAGGACTCACAGGCCAACATGTGTTCCATGGCTGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258955.7
3UTR TCA 72 bp TTCTGGTTTCCCGAAGATAAGAGGCAAGGCTTGCTCTaGTCTTTCCCAGTTCTCAGAGTCCAGCAGGCCGCT +
Preference number: 3 (lower is better)
Translates to: FWFPEDKRQGLL*SFPVLRVQQAA
Trigger: AGCGGCCTGCTGGACTCTGAGAACTGGGAAAGATCAGAGCAAGCCTTGCCTCTTATCTTCGGGAAACCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258955.7
3UTR CCA 72 bp TCAGAGTCCAGCAGGCCGCTGTGCTGGACACATACATaGATCCACCAACATACATCAGTCCTTCTGTGTTCT +
Preference number: 3 (lower is better)
Translates to: SESSRPLCWTHT*IHQHTSVLLCS
Trigger: AGAACACAGAAGGACTGATGTATGTTGGTGGATCCATGTATGTGTCCAGCACAGCGGCCTGCTGGACTCTGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258955.7
3UTR GCA 72 bp CTGCTGGAAGCTGAGACCATCAGCAGGAGTTTTCTGTaGCTCCTGCAAGTTGCTGATTTCTCACAGTTGCTA +
Preference number: 3 (lower is better)
Translates to: LLEAETISRSFL*LLQVADFSQLL
Trigger: TAGCAACTGTGAGAAATCAGCAACTTGCAGGAGGCACAGAAAACTCCTGCTGATGGTCTCAGCTTCCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258955.7
3UTR GCA 72 bp AAGCTGAGACCATCAGCAGGAGTTTTCTGTGCCTCCTaGAAGTTGCTGATTTCTCACAGTTGCTACTGGCTT +
Preference number: 3 (lower is better)
Translates to: KLRPSAGVFCAS*KLLISHSCYWL
Trigger: AAGCCAGTAGCAACTGTGAGAAATCAGCAACTTGCAGGAGGCACAGAAAACTCCTGCTGATGGTCTCAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258955.7
3UTR GCA 72 bp ACATATTCTGGTTTCCCGAAGATAAGAGGCAAGGCTTaGTCTGATCTTTCCCAGTTCTCAGAGTCCAGCAGG +
Preference number: 3 (lower is better)
Translates to: TYSGFPKIRGKA*SDLSQFSESSR
Trigger: CCTGCTGGACTCTGAGAACTGGGAAAGATCAGAGCAAGCCTTGCCTCTTATCTTCGGGAAACCAGAATATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258955.7
3UTR CCA 72 bp ATGTCTGCAGTACCGACCCAGCTCTCAAAACCCACCTaGCATTACCCTGGAACACAGGAACATTTTTGTCAT +
Preference number: 3 (lower is better)
Translates to: MSAVPTQLSKPT*HYPGTQEHFCH
Trigger: ATGACAAAAATGTTCCTGTGTTCCAGGGTAATGCCAGGTGGGTTTTGAGAGCTGGGTCGGTACTGCAGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506211.1
3UTR TCA 72 bp CATCAGCAGGAGTTTTCTGTGCCTCCTGCAAGTTGCTaGTTTCTCACAGTTGCTACTGGCTTTCTCCAATGT +
Preference number: 3 (lower is better)
Translates to: HQQEFSVPPASC*FLTVATGFLQC
Trigger: ACATTGGAGAAAGCCAGTAGCAACTGTGAGAAATCAGCAACTTGCAGGAGGCACAGAAAACTCCTGCTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258955.7
3UTR GCA 72 bp TCCACCAACATACATCAGTCCTTCTGTGTTCTCTCCTaGATGGTAGAGGCTGGAAGCCTAAGAGCTATATTC +
Preference number: 3 (lower is better)
Translates to: STNIHQSFCVLS*MVEAGSLRAIF
Trigger: GAATATAGCTCTTAGGCTTCCAGCCTCTACCATGCAGGAGAGAACACAGAAGGACTGATGTATGTTGGTGGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258955.7
3UTR GCA 72 bp GCTGGAAGCCTAAGAGCTATATTCCTCAGAATTTCCTaGCAGCCAGGATTTGCTTTAAAGTCCACTAATGAG +
Preference number: 3 (lower is better)
Translates to: AGSLRAIFLRIS*QPGFALKSTNE
Trigger: CTCATTAGTGGACTTTAAAGCAAATCCTGGCTGGCAGGAAATTCTGAGGAATATAGCTCTTAGGCTTCCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR CCA 90 bp GCCGGGCCTCTGCCAGCGTCCGCAGAGCATCGCAGGCCGAGTGCGTCCGTCCCACTCCGGGTCAGGGGCTaGAAGGGCACCCCGCTGCAC +
Preference number: 4 (lower is better)
Translates to: AGPLPASAEHRRPSASVPLRVRG*KGTPLH
Trigger: GTGCAGCGGGGTGCCCTTCCAGCCCCTGACCCGGAG...TGGGACGGACGCACTCGGCCTGCGATGCTCTGCGGACGCTGGCAGAGGCCCGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504284.1
CDS-3UTR GCA 90 bp GCCGGGCCTCTGCCAGCGTCCGCAGAGCATCGCAGGCCGAGTGCGTCCGTCCCAGCATCGCAGGCCGAGTaGGTCCGTCCCAACAGCCGG +
Preference number: 4 (lower is better)
Translates to: AGPLPASAEHRRPSASVPASQAE*VRPNSR
Trigger: CCGGCTGTTGGGACGGACGCACTCGGCCTGCGATGC...TGGGACGGACGCACTCGGCCTGCGATGCTCTGCGGACGCTGGCAGAGGCCCGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504284.1
CDS-3UTR GCA 90 bp GCCTGCCCAGGGGGACACGCTTCCGGGTGCCATGGCCAAACAGCATCACCTCCTAGCCACGGCCCCACCTaGTGTGCCGGCAGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: ACPGGHASGCHGQTASPPSHGPT*CAGSPS
Trigger: GCTGGGGCTGCCGGCACAGCAGGTGGGGCCGTGGCT...AGGAGGTGATGCTGTTTGGCCATGGCACCCGGAAGCGTGTCCCCCTGGGCAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000504284.1
ENST00000515221.2
CDS-3UTR GCA 90 bp AAGTCTACAGACACGCGCCCGGGAAAGAGGCGCCGGGCCTCTGCCAGCGTCCGCGGGCGAAGAGTGCGGTaGCCCGCTCCAGGGACAGCT +
Preference number: 4 (lower is better)
Translates to: KSTDTRPGKRRRASASVRGRRVR*PAPGTA
Trigger: AGCTGTCCCTGGAGCGGGGCACCGCACTCTTCGCCC...GCGGACGCTGGCAGAGGCCCGGCGCCTCTTTCCCGGGCGCGTGTCTGTAGACTT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504284.1
CDS-3UTR GCA 90 bp AGCATCAAGTCTACAGACACGCGCCCGGGAAAGAGGCGCCGGGCCTCTGCCAGCACTCGGGGACCCTCCTaGGTTCTCCACGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: SIKSTDTRPGKRRRASASTRGPS*VLHAAA
Trigger: CGCCGCCGCGTGGAGAACGCAGGAGGGTCCCCGAGT...GCTGGCAGAGGCCCGGCGCCTCTTTCCCGGGCGCGTGTCTGTAGACTTGATGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504284.1
CDS-3UTR GCA 90 bp GCCTGCCCAGGGGGACACGCTTCCGGGTGCCATGGCCAAACAGCATCACCTCCTACTCGGGGACCCTCCTaGGTTCTCCACGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: ACPGGHASGCHGQTASPPTRGPS*VLHAAA
Trigger: CGCCGCCGCGTGGAGAACGCAGGAGGGTCCCCGAGT...AGGAGGTGATGCTGTTTGGCCATGGCACCCGGAAGCGTGTCCCCCTGGGCAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504284.1
ENST00000515221.2
CDS-3UTR GCA 90 bp CCAGTGAGCTCCAGCCTGCCCAGGGGGACACGCTTCCGGGTGCCATGGCCAAACCACCTGGGCGAAGAGTaGGGTGCCCCGCTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: PVSSSLPRGTRFRVPWPNHLGEE*GAPLQG
Trigger: TCCCTGGAGCGGGGCACCGCACTCTTCGCCCAGGTG...GTTTGGCCATGGCACCCGGAAGCGTGTCCCCCTGGGCAGGCTGGAGCTCACTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515221.2
CDS-3UTR CCA 90 bp GCCTGCCCAGGGGGACACGCTTCCGGGTGCCATGGCCAAACAGCATCACCTCCTGCACCCCGCTGCACCTaGGCGAAGAGTGCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: ACPGGHASGCHGQTASPPAPRCT*AKSAVP
Trigger: GGGCACCGCACTCTTCGCCCAGGTGCAGCGGGGTGC...AGGAGGTGATGCTGTTTGGCCATGGCACCCGGAAGCGTGTCCCCCTGGGCAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504284.1
ENST00000515221.2
CDS-3UTR CCA 90 bp CCGGGCCTCTGCCAGCGTCCGCAGAGCATCGCAGGCCGAGTGCGTCCGTCCCAAACAGCCCGGCCCCTCTaGTACATCTCAGCTGCGAGC +
Preference number: 4 (lower is better)
Translates to: PGLCQRPQSIAGRVRPSQTARPL*YISAAS
Trigger: GCTCGCAGCTGAGATGTACCAGAGGGGCCGGGCTGT...TTGGGACGGACGCACTCGGCCTGCGATGCTCTGCGGACGCTGGCAGAGGCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504284.1
CDS-3UTR CCA 90 bp GCCGGGCCTCTGCCAGCGTCCGCAGAGCATCGCAGGCCGAGTGCGTCCGTCCCAGGCATAAATCGTCCATaGGCCCCAGGCCCAACGCCA +
Preference number: 4 (lower is better)
Translates to: AGPLPASAEHRRPSASVPGINRP*APGPTP
Trigger: TGGCGTTGGGCCTGGGGCCCATGGACGATTTATGCC...TGGGACGGACGCACTCGGCCTGCGATGCTCTGCGGACGCTGGCAGAGGCCCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504284.1
CDS-3UTR CCA 90 bp GCCGGGCCTCTGCCAGCGTCCGCAGAGCATCGCAGGCCGAGTGCGTCCGTCCCACGCTTCCGGGTGCCATaGCCAAACAGCATCACCTCC +
Preference number: 4 (lower is better)
Translates to: AGPLPASAEHRRPSASVPRFRVP*PNSITS
Trigger: GGAGGTGATGCTGTTTGGCCATGGCACCCGGAAGCG...TGGGACGGACGCACTCGGCCTGCGATGCTCTGCGGACGCTGGCAGAGGCCCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504284.1
CDS-3UTR TCA 90 bp CGCAGAGCATCGCAGGCCGAGTGCGTCCGTCCCAACAGCCGGAGCTCAGTGTCAGACGTTGCACCCCGCTaGGCCGCAGCAGCGTCTGAG +
Preference number: 4 (lower is better)
Translates to: RRASQAECVRPNSRSSVSDVAPR*AAAASE
Trigger: CTCAGACGCTGCTGCGGCTCAGCGGGGTGCAACGTC...TGACACTGAGCTCCGGCTGTTGGGACGGACGCACTCGGCCTGCGATGCTCTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504284.1
CDS-3UTR GCA 90 bp CCAGTGAGCTCCAGCCTGCCCAGGGGGACACGCTTCCGGGTGCCATGGCCAAACAGCAGTTCCTGCAGCTaGCCAAGCCACGGCCCCACC +
Preference number: 4 (lower is better)
Translates to: PVSSSLPRGTRFRVPWPNSSSCS*PSHGPT
Trigger: GGTGGGGCCGTGGCTTGGGCAGCTGCAGGAACTGCT...GTTTGGCCATGGCACCCGGAAGCGTGTCCCCCTGGGCAGGCTGGAGCTCACTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515221.2
CDS-3UTR CCA 90 bp CCCAGGAACACCGAAGACCCCTGTGATCCAGCTGCAGTAGGCCCCGCTCCAGCAGCACCCCGCTGCACCTaGGCGAAGAGTGCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: PRNTEDPCDPAAVGPAPAAPRCT*AKSAVP
Trigger: GGGCACCGCACTCTTCGCCCAGGTGCAGCGGGGTGC...TGCTGGAGCGGGGCCTACTGCAGCTGGATCACAGGGGTCTTCGGTGTTCCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000504284.1
ENST00000506211.1
CDS-3UTR CCA 90 bp CACATCCCACAGGGTCAGCTGGGGCTCAAACTGCTGCCAGTGAGCTCCAGCCTGCTCCGGGTCAGGGGCTaGAAGGGCACCCCGCTGCAC +
Preference number: 4 (lower is better)
Translates to: HIPQGQLGLKLLPVSSSLLRVRG*KGTPLH
Trigger: GTGCAGCGGGGTGCCCTTCCAGCCCCTGACCCGGAG...CAGGCTGGAGCTCACTGGCAGCAGTTTGAGCCCCAGCTGACCCTGTGGGATGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515221.2
CDS-3UTR CCA 90 bp GCTGGAAGGGCACCCCGCTGCACCTGGGCGAAGAGTGCGGTGCCCCGCTCCAGGTTGGAGACCTCATACTaGTGGAAGCCAGCCTCCCGA +
Preference number: 4 (lower is better)
Translates to: AGRAPRCTWAKSAVPRSRLETSY*WKPASR
Trigger: TCGGGAGGCTGGCTTCCACCAGTATGAGGTCTCCAA...CCTGGAGCGGGGCACCGCACTCTTCGCCCAGGTGCAGCGGGGTGCCCTTCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504284.1
CDS-3UTR TCA 90 bp GCCTGCCCAGGGGGACACGCTTCCGGGTGCCATGGCCAAACAGCATCACCTCCTCACCGAAGACCCCTGTaGTCCAGCTGCAGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: ACPGGHASGCHGQTASPPHRRPL*SSCSRP
Trigger: GGGCCTACTGCAGCTGGATCACAGGGGTCTTCGGTG...AGGAGGTGATGCTGTTTGGCCATGGCACCCGGAAGCGTGTCCCCCTGGGCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504284.1
CDS-3UTR GCA 90 bp CCCATTCCGGGCAAAGTTGGAGACCTCATACTGGTGGAAGCCAGCCTCCCGAAGAGCCACGGCCCCACCTaGTGTGCCGGCAGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: PIPGKVGDLILVEASLPKSHGPT*CAGSPS
Trigger: GCTGGGGCTGCCGGCACAGCAGGTGGGGCCGTGGCT...CTTCGGGAGGCTGGCTTCCACCAGTATGAGGTCTCCAACTTTGCCCGGAATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504284.1
CDS-3UTR GCA 90 bp GAGGCAGGAGGGTCAGCAAGAGAGAGTCCAGCACAGCCAGACCCTCCCAGGAACGGGCGAAGAGTGCGGTaGCCCGCTCCAGGGACAGCT +
Preference number: 4 (lower is better)
Translates to: EAGGSARESPAQPDPPRNGRRVR*PAPGTA
Trigger: AGCTGTCCCTGGAGCGGGGCACCGCACTCTTCGCCC...GTTCCTGGGAGGGTCTGGCTGTGCTGGACTCTCTCTTGCTGACCCTCCTGCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504284.1
ENST00000506211.1
ENST00000515221.2
CDS-3UTR CCA 90 bp CCACAGGGTCAGCTGGGGCTCAAACTGCTGCCAGTGAGCTCCAGCCTGCCCAGGACAGCCCGGCCCCTCTaGTACATCTCAGCTGCGAGC +
Preference number: 4 (lower is better)
Translates to: PQGQLGLKLLPVSSSLPRTARPL*YISAAS
Trigger: GCTCGCAGCTGAGATGTACCAGAGGGGCCGGGCTGT...CCTGGGCAGGCTGGAGCTCACTGGCAGCAGTTTGAGCCCCAGCTGACCCTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515221.2
CDS-3UTR GCA 90 bp GCAGCTCCTGCACCTCCTTGTTCGCTCCAAACACATCCCACAGGGTCAGCTGGGGCATCGCAGGCCGAGTaGGTCCGTCCCAACAGCCGG +
Preference number: 4 (lower is better)
Translates to: AAPAPPCSLQTHPTGSAGASQAE*VRPNSR
Trigger: CCGGCTGTTGGGACGGACGCACTCGGCCTGCGATGC...CCCAGCTGACCCTGTGGGATGTGTTTGGAGCGAACAAGGAGGTGCAGGAGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504284.1
ENST00000506211.1
ENST00000515221.2
CDS-3UTR GCA 90 bp GAGGCAGGAGGGTCAGCAAGAGAGAGTCCAGCACAGCCAGACCCTCCCAGGAACAGCAGTTCCTGCAGCTaGCCAAGCCACGGCCCCACC +
Preference number: 4 (lower is better)
Translates to: EAGGSARESPAQPDPPRNSSSCS*PSHGPT
Trigger: GGTGGGGCCGTGGCTTGGGCAGCTGCAGGAACTGCT...GTTCCTGGGAGGGTCTGGCTGTGCTGGACTCTCTCTTGCTGACCCTCCTGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504284.1
ENST00000506211.1
ENST00000515221.2
CDS-3UTR GCA 90 bp CAGCTCCTGCACCTCCTTGTTCGCTCCAAACACATCCCACAGGGTCAGCTGGGGCAGGGCTCCCTGGTATaGCTCAGCCCCCTCTGCCCG +
Preference number: 4 (lower is better)
Translates to: QLLHLLVRSKHIPQGQLGQGSLV*LSPLCP
Trigger: CGGGCAGAGGGGGCTGAGGCATACCAGGGAGCCCTG...CCCCAGCTGACCCTGTGGGATGTGTTTGGAGCGAACAAGGAGGTGCAGGAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515221.2
CDS-3UTR CCA 90 bp CCCAGTTCTCAGAGTCCAGCAGGCCGCTGTGCTGGACACATACATGGATCCACCCTCCGGGTCAGGGGCTaGAAGGGCACCCCGCTGCAC +
Preference number: 4 (lower is better)
Translates to: PSSQSPAGRCAGHIHGSTLRVRG*KGTPLH
Trigger: GTGCAGCGGGGTGCCCTTCCAGCCCCTGACCCGGAG...GGTGGATCCATGTATGTGTCCAGCACAGCGGCCTGCTGGACTCTGAGAACTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR GCA 90 bp ACCACAAGGAGCAGAGACGGCACCCGACAACGGAGAAGAGATGTCTGCAGTACCACTCGGGGACCCTCCTaGGTTCTCCACGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: TTRSRDGTRQRRRDVCSTTRGPS*VLHAAA
Trigger: CGCCGCCGCGTGGAGAACGCAGGAGGGTCCCCGAGT...GGTACTGCAGACATCTCTTCTCCGTTGTCGGGTGCCGTCTCTGCTCCTTGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR GCA 90 bp CAAACACATCCCACAGGGTCAGCTGGGGCTCAAACTGCTGCCAGTGAGCTCCAGGCATCGCAGGCCGAGTaGGTCCGTCCCAACAGCCGG +
Preference number: 4 (lower is better)
Translates to: QTHPTGSAGAQTAASELQASQAE*VRPNSR
Trigger: CCGGCTGTTGGGACGGACGCACTCGGCCTGCGATGC...CTGGAGCTCACTGGCAGCAGTTTGAGCCCCAGCTGACCCTGTGGGATGTGTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515221.2
CDS-3UTR GCA 90 bp TGCTCTGATCTTTCCCAGTTCTCAGAGTCCAGCAGGCCGCTGTGCTGGACACATAGCCACGGCCCCACCTaGTGTGCCGGCAGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: CSDLSQFSESSRPLCWTHSHGPT*CAGSPS
Trigger: GCTGGGGCTGCCGGCACAGCAGGTGGGGCCGTGGCT...ATGTGTCCAGCACAGCGGCCTGCTGGACTCTGAGAACTGGGAAAGATCAGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR GCA 90 bp AGCAGCTCCTGCACCTCCTTGTTCGCTCCAAACACATCCCACAGGGTCAGCTGGGGGCGAAGAGTGCGGTaGCCCGCTCCAGGGACAGCT +
Preference number: 4 (lower is better)
Translates to: SSSCTSLFAPNTSHRVSWGRRVR*PAPGTA
Trigger: AGCTGTCCCTGGAGCGGGGCACCGCACTCTTCGCCC...CCAGCTGACCCTGTGGGATGTGTTTGGAGCGAACAAGGAGGTGCAGGAGCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000504284.1
ENST00000506211.1
ENST00000515221.2
CDS-3UTR GCA 90 bp ATCACCTCCTTCATCCAGTTGTCAGGCTCCAGTGTCTGGATCCGAGCCTCCCGGCACCTGGGCGAAGAGTaGGGTGCCCCGCTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: ITSFIQLSGSSVWIRASRHLGEE*GAPLQG
Trigger: TCCCTGGAGCGGGGCACCGCACTCTTCGCCCAGGTG...CCGGGAGGCTCGGATCCAGACACTGGAGCCTGACAACTGGATGAAGGAGGTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504284.1
CDS-3UTR GCA 90 bp CGCAGAGCATCGCAGGCCGAGTGCGTCCGTCCCAACAGCCGGAGCTCAGTGTCAGGACACGCTTCCGGGTaGCATGGCCAAACAGCATCA +
Preference number: 4 (lower is better)
Translates to: RRASQAECVRPNSRSSVSGHASG*HGQTAS
Trigger: TGATGCTGTTTGGCCATGGCACCCGGAAGCGTGTCC...TGACACTGAGCTCCGGCTGTTGGGACGGACGCACTCGGCCTGCGATGCTCTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504284.1
CDS-3UTR GCA 90 bp GAGGCAGGAGGGTCAGCAAGAGAGAGTCCAGCACAGCCAGACCCTCCCAGGAACGGGGAGGGGGTTCTCTaGTGCCAGGCTTCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: EAGGSARESPAQPDPPRNGEGVL*CQASWS
Trigger: GCTCCAAGAAGCCTGGCAGCAGAGAACCCCCTCCCC...GTTCCTGGGAGGGTCTGGCTGTGCTGGACTCTCTCTTGCTGACCCTCCTGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506211.1
ENST00000515221.2
CDS-3UTR GCA 90 bp CACATCCCACAGGGTCAGCTGGGGCTCAAACTGCTGCCAGTGAGCTCCAGCCTGGGGGAGGGGGTTCTCTaGTGCCAGGCTTCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: HIPQGQLGLKLLPVSSSLGEGVL*CQASWS
Trigger: GCTCCAAGAAGCCTGGCAGCAGAGAACCCCCTCCCC...CAGGCTGGAGCTCACTGGCAGCAGTTTGAGCCCCAGCTGACCCTGTGGGATGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000515221.2
CDS-3UTR CCA 90 bp GGTGGAAGCCAGCCTCCCGAAGGACAGCCCGGCCCCTCTGGTACATCTCAGCTGGAGACCTCATACTGGTaGAAGCCAGCCTCCCGAAGG +
Preference number: 4 (lower is better)
Translates to: GGSQPPEGQPGPSGTSQLETSYW*KPASRR
Trigger: CCTTCGGGAGGCTGGCTTCCACCAGTATGAGGTCTC...CAGCTGAGATGTACCAGAGGGGCCGGGCTGTCCTTCGGGAGGCTGGCTTCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504284.1
CDS-3UTR CCA 90 bp CCCAGGAACACCGAAGACCCCTGTGATCCAGCTGCAGTAGGCCCCGCTCCAGCAGGCATAAATCGTCCATaGGCCCCAGGCCCAACGCCA +
Preference number: 4 (lower is better)
Translates to: PRNTEDPCDPAAVGPAPAGINRP*APGPTP
Trigger: TGGCGTTGGGCCTGGGGCCCATGGACGATTTATGCC...TGCTGGAGCGGGGCCTACTGCAGCTGGATCACAGGGGTCTTCGGTGTTCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000504284.1
ENST00000506211.1
CDS-3UTR CCA 90 bp GAGGCAGGAGGGTCAGCAAGAGAGAGTCCAGCACAGCCAGACCCTCCCAGGAACTCAGGCTCCAGTGTCTaGATCCGAGCCTCCCGGGTG +
Preference number: 4 (lower is better)
Translates to: EAGGSARESPAQPDPPRNSGSSV*IRASRV
Trigger: CACCCGGGAGGCTCGGATCCAGACACTGGAGCCTGA...GTTCCTGGGAGGGTCTGGCTGTGCTGGACTCTCTCTTGCTGACCCTCCTGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504284.1
ENST00000506211.1
ENST00000515221.2
CDS-3UTR CCA 90 bp CATCCAGTTGTCAGGCTCCAGTGTCTGGATCCGAGCCTCCCGGGTGTGGCCTCCTCCCACAGGGTCAGCTaGGGCTCAAACTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: HPVVRLQCLDPSLPGVASSHRVS*GSNCCQ
Trigger: CTGGCAGCAGTTTGAGCCCCAGCTGACCCTGTGGGA...GGAGGCCACACCCGGGAGGCTCGGATCCAGACACTGGAGCCTGACAACTGGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504284.1
CDS-3UTR TCA 90 bp CACCTGCTGTGCCGGCAGCCCCAGCATCAAGTCTACAGACACGCGCCCGGGAAATCCAATTGTGGGTACTaGGCGCCCCATTCCGGGCAA +
Preference number: 4 (lower is better)
Translates to: HLLCRQPQHQVYRHAPGKSNCGY*APHSGQ
Trigger: TTGCCCGGAATGGGGCGCTCAGTACCCACAATTGGA...TTTCCCGGGCGCGTGTCTGTAGACTTGATGCTGGGGCTGCCGGCACAGCAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504284.1
CDS-3UTR TCA 90 bp CCAGGGGGACACGCTTCCGGGTGCCATGGCCAAACAGCATCACCTCCTTCATCCTGCTGCCAGTGCTGGTaGGTGATCCCCACATCGGTG +
Preference number: 4 (lower is better)
Translates to: PGGHASGCHGQTASPPSSCCQCW*VIPTSV
Trigger: CACCGATGTGGGGATCACTCACCAGCACTGGCAGCA...GGATGAAGGAGGTGATGCTGTTTGGCCATGGCACCCGGAAGCGTGTCCCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504284.1
CDS-3UTR TCA 90 bp GAGGCAGGAGGGTCAGCAAGAGAGAGTCCAGCACAGCCAGACCCTCCCAGGAACTGCTGCCAGTGCTGGTaGGTGATCCCCACATCGGTG +
Preference number: 4 (lower is better)
Translates to: EAGGSARESPAQPDPPRNCCQCW*VIPTSV
Trigger: CACCGATGTGGGGATCACTCACCAGCACTGGCAGCA...GTTCCTGGGAGGGTCTGGCTGTGCTGGACTCTCTCTTGCTGACCCTCCTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504284.1
ENST00000506211.1
CDS-3UTR GCA 90 bp GAAGAGATGTCTGCAGTACCGACCCAGCTCTCAAAACCCACCTGGCATTACCCTAGCCACGGCCCCACCTaGTGTGCCGGCAGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: EEMSAVPTQLSKPTWHYPSHGPT*CAGSPS
Trigger: GCTGGGGCTGCCGGCACAGCAGGTGGGGCCGTGGCT...AGGGTAATGCCAGGTGGGTTTTGAGAGCTGGGTCGGTACTGCAGACATCTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258955.7
ENST00000506211.1
CDS-3UTR GCA 90 bp CCCATTCCGGGCAAAGTTGGAGACCTCATACTGGTGGAAGCCAGCCTCCCGAAGAGCAGTTCCTGCAGCTaGCCAAGCCACGGCCCCACC +
Preference number: 4 (lower is better)
Translates to: PIPGKVGDLILVEASLPKSSSCS*PSHGPT
Trigger: GGTGGGGCCGTGGCTTGGGCAGCTGCAGGAACTGCT...CTTCGGGAGGCTGGCTTCCACCAGTATGAGGTCTCCAACTTTGCCCGGAATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504284.1
CDS-3UTR GCA 90 bp GCTGAGGCAGGAGGGTCAGCAAGAGAGAGTCCAGCACAGCCAGACCCTCCCAGGGGACACGCTTCCGGGTaGCATGGCCAAACAGCATCA +
Preference number: 4 (lower is better)
Translates to: AEAGGSARESPAQPDPPRGHASG*HGQTAS
Trigger: TGATGCTGTTTGGCCATGGCACCCGGAAGCGTGTCC...CCTGGGAGGGTCTGGCTGTGCTGGACTCTCTCTTGCTGACCCTCCTGCCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504284.1
ENST00000515221.2
CDS-3UTR GCA 90 bp GGAGCAGAGACGGCACCCGACAACGGAGAAGAGATGTCTGCAGTACCGACCCAGGGGGAGGGGGTTCTCTaGTGCCAGGCTTCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: GAETAPDNGEEMSAVPTQGEGVL*CQASWS
Trigger: GCTCCAAGAAGCCTGGCAGCAGAGAACCCCCTCCCC...CTGGGTCGGTACTGCAGACATCTCTTCTCCGTTGTCGGGTGCCGTCTCTGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000258955.7
ENST00000506211.1
CDS-3UTR CCA 90 bp CACCCGACAACGGAGAAGAGATGTCTGCAGTACCGACCCAGCTCTCAAAACCCAGCACCCCGCTGCACCTaGGCGAAGAGTGCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: HPTTEKRCLQYRPSSQNPAPRCT*AKSAVP
Trigger: GGGCACCGCACTCTTCGCCCAGGTGCAGCGGGGTGC...TGGGTTTTGAGAGCTGGGTCGGTACTGCAGACATCTCTTCTCCGTTGTCGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258955.7
ENST00000506211.1
CDS-3UTR CCA 90 bp GGAGCAGAGACGGCACCCGACAACGGAGAAGAGATGTCTGCAGTACCGACCCAGACAGCCCGGCCCCTCTaGTACATCTCAGCTGCGAGC +
Preference number: 4 (lower is better)
Translates to: GAETAPDNGEEMSAVPTQTARPL*YISAAS
Trigger: GCTCGCAGCTGAGATGTACCAGAGGGGCCGGGCTGT...CTGGGTCGGTACTGCAGACATCTCTTCTCCGTTGTCGGGTGCCGTCTCTGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258955.7
ENST00000506211.1
CDS-3UTR CCA 90 bp CCCAGGAACACCGAAGACCCCTGTGATCCAGCTGCAGTAGGCCCCGCTCCAGCAGAGACCTCATACTGGTaGAAGCCAGCCTCCCGAAGG +
Preference number: 4 (lower is better)
Translates to: PRNTEDPCDPAAVGPAPAETSYW*KPASRR
Trigger: CCTTCGGGAGGCTGGCTTCCACCAGTATGAGGTCTC...TGCTGGAGCGGGGCCTACTGCAGCTGGATCACAGGGGTCTTCGGTGTTCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504284.1
ENST00000506211.1
CDS-3UTR CCA 90 bp GCTGAGGCAGGAGGGTCAGCAAGAGAGAGTCCAGCACAGCCAGACCCTCCCAGGGAGACCTCATACTGGTaGAAGCCAGCCTCCCGAAGG +
Preference number: 4 (lower is better)
Translates to: AEAGGSARESPAQPDPPRETSYW*KPASRR
Trigger: CCTTCGGGAGGCTGGCTTCCACCAGTATGAGGTCTC...CCTGGGAGGGTCTGGCTGTGCTGGACTCTCTCTTGCTGACCCTCCTGCCTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504284.1
ENST00000506211.1
ENST00000515221.2
CDS-3UTR CCA 90 bp GAGGCAGGAGGGTCAGCAAGAGAGAGTCCAGCACAGCCAGACCCTCCCAGGAACTGGCCTCCAGCCCCCTaGGGCATAAATCGTCCATGG +
Preference number: 4 (lower is better)
Translates to: EAGGSARESPAQPDPPRNWPPAP*GINRPW
Trigger: CCATGGACGATTTATGCCCCAGGGGGCTGGAGGCCA...GTTCCTGGGAGGGTCTGGCTGTGCTGGACTCTCTCTTGCTGACCCTCCTGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000504284.1
ENST00000506211.1
ENST00000515221.2
CDS-3UTR CCA 90 bp TTGGAGCTGAGGCAGGAGGGTCAGCAAGAGAGAGTCCAGCACAGCCAGACCCTCTCAGGCTCCAGTGTCTaGATCCGAGCCTCCCGGGTG +
Preference number: 4 (lower is better)
Translates to: LELRQEGQQERVQHSQTLSGSSV*IRASRV
Trigger: CACCCGGGAGGCTCGGATCCAGACACTGGAGCCTGA...GAGGGTCTGGCTGTGCTGGACTCTCTCTTGCTGACCCTCCTGCCTCAGCTCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504284.1
ENST00000506211.1
ENST00000515221.2
CDS-3UTR CCA 90 bp GAGGCAGGAGGGTCAGCAAGAGAGAGTCCAGCACAGCCAGACCCTCCCAGGAACTCCCACAGGGTCAGCTaGGGCTCAAACTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: EAGGSARESPAQPDPPRNSHRVS*GSNCCQ
Trigger: CTGGCAGCAGTTTGAGCCCCAGCTGACCCTGTGGGA...GTTCCTGGGAGGGTCTGGCTGTGCTGGACTCTCTCTTGCTGACCCTCCTGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504284.1
ENST00000506211.1
ENST00000515221.2
CDS-3UTR GCA 90 bp CACAAGGAGCAGAGACGGCACCCGACAACGGAGAAGAGATGTCTGCAGTACCGAACAGACTCCACCCGTTaGACCCCGCTGAGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: HKEQRRHPTTEKRCLQYRTDSTR*TPLSRS
Trigger: GCTGCGGCTCAGCGGGGTGCAACGGGTGGAGTCTGT...TCGGTACTGCAGACATCTCTTCTCCGTTGTCGGGTGCCGTCTCTGCTCCTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR GCA 90 bp CACCTGCTGTGCCGGCAGCCCCAGCATCAAGTCTACAGACACGCGCCCGGGAAATGGTCATCACAGTGGTaGAGCAGTTCCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: HLLCRQPQHQVYRHAPGKWSSQW*SSSCSC
Trigger: GCAGCTGCAGGAACTGCTGCACCACTGTGATGACCA...TTTCCCGGGCGCGTGTCTGTAGACTTGATGCTGGGGCTGCCGGCACAGCAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504284.1
CDS-3UTR GCA 90 bp AACCACAAGGAGCAGAGACGGCACCCGACAACGGAGAAGAGATGTCTGCAGTACCACCTGGGCGAAGAGTaGGGTGCCCCGCTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: NHKEQRRHPTTEKRCLQYHLGEE*GAPLQG
Trigger: TCCCTGGAGCGGGGCACCGCACTCTTCGCCCAGGTG...GTACTGCAGACATCTCTTCTCCGTTGTCGGGTGCCGTCTCTGCTCCTTGTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258955.7
ENST00000506211.1
CDS-3UTR GCA 90 bp GCAGCTCCTGCACCTCCTTGTTCGCTCCAAACACATCCCACAGGGTCAGCTGGGCGCTCCAGCAGCTCCTaGACCTCCTTGTTCGCTCCA +
Preference number: 4 (lower is better)
Translates to: AAPAPPCSLQTHPTGSAGRSSSS*TSLFAP
Trigger: TGGAGCGAACAAGGAGGTGCAGGAGCTGCTGGAGCG...CCCAGCTGACCCTGTGGGATGTGTTTGGAGCGAACAAGGAGGTGCAGGAGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504284.1
ENST00000506211.1
ENST00000515221.2
CDS-3UTR CCA 90 bp AATAACCACAAGGAGCAGAGACGGCACCCGACAACGGAGAAGAGATGTCTGCAGGCACCCCGCTGCACCTaGGCGAAGAGTGCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: NNHKEQRRHPTTEKRCLQAPRCT*AKSAVP
Trigger: GGGCACCGCACTCTTCGCCCAGGTGCAGCGGGGTGC...CTGCAGACATCTCTTCTCCGTTGTCGGGTGCCGTCTCTGCTCCTTGTGGTTATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258955.7
ENST00000506211.1
CDS-3UTR CCA 90 bp ATGTCTGCAGTACCGACCCAGCTCTCAAAACCCACCTGGCATTACCCTGGAACACTCCGGGTCAGGGGCTaGAAGGGCACCCCGCTGCAC +
Preference number: 4 (lower is better)
Translates to: MSAVPTQLSKPTWHYPGTLRVRG*KGTPLH
Trigger: GTGCAGCGGGGTGCCCTTCCAGCCCCTGACCCGGAG...TGTTCCAGGGTAATGCCAGGTGGGTTTTGAGAGCTGGGTCGGTACTGCAGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258955.7
ENST00000506211.1
CDS-3UTR CCA 90 bp AGCAGCTCCTGCACCTCCTTGTTCGCTCCAAACACATCCCACAGGGTCAGCTGGTCAGGCTCCAGTGTCTaGATCCGAGCCTCCCGGGTG +
Preference number: 4 (lower is better)
Translates to: SSSCTSLFAPNTSHRVSWSGSSV*IRASRV
Trigger: CACCCGGGAGGCTCGGATCCAGACACTGGAGCCTGA...CCAGCTGACCCTGTGGGATGTGTTTGGAGCGAACAAGGAGGTGCAGGAGCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504284.1
ENST00000506211.1
ENST00000515221.2
CDS-3UTR CCA 90 bp TTGGAGCTGAGGCAGGAGGGTCAGCAAGAGAGAGTCCAGCACAGCCAGACCCTCCGCTTCCGGGTGCCATaGCCAAACAGCATCACCTCC +
Preference number: 4 (lower is better)
Translates to: LELRQEGQQERVQHSQTLRFRVP*PNSITS
Trigger: GGAGGTGATGCTGTTTGGCCATGGCACCCGGAAGCG...GAGGGTCTGGCTGTGCTGGACTCTCTCTTGCTGACCCTCCTGCCTCAGCTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504284.1
ENST00000515221.2
CDS-3UTR CCA 90 bp CCACAGGGTCAGCTGGGGCTCAAACTGCTGCCAGTGAGCTCCAGCCTGCCCAGGGGCATAAATCGTCCATaGGCCCATTCCGGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: PQGQLGLKLLPVSSSLPRGINRP*AHSGQS
Trigger: ACTTTGCCCGGAATGGGCCCATGGACGATTTATGCC...CCTGGGCAGGCTGGAGCTCACTGGCAGCAGTTTGAGCCCCAGCTGACCCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515221.2
CDS-3UTR TCA 90 bp CCCCAGGCCCAACGCCAAGGTACTGACCACACTGCCAGTAAGTCCAATTGTGGGGCCAGTGCTGGTGAGTaGTCCCCACATCGGTGCGTA +
Preference number: 4 (lower is better)
Translates to: PQAQRQGTDHTASKSNCGASAGE*SPHRCV
Trigger: TACGCACCGATGTGGGGATCACTCACCAGCACTGGC...CCCACAATTGGACTTACTGGCAGTGTGGTCAGTACCTTGGCGTTGGGCCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000504284.1
CDS-3UTR TCA 90 bp ACCACAAGGAGCAGAGACGGCACCCGACAACGGAGAAGAGATGTCTGCAGTACCCACCGAAGACCCCTGTaGTCCAGCTGCAGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: TTRSRDGTRQRRRDVCSTHRRPL*SSCSRP
Trigger: GGGCCTACTGCAGCTGGATCACAGGGGTCTTCGGTG...GGTACTGCAGACATCTCTTCTCCGTTGTCGGGTGCCGTCTCTGCTCCTTGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258955.7
ENST00000506211.1
CDS-3UTR TCA 90 bp CACAAGGAGCAGAGACGGCACCCGACAACGGAGAAGAGATGTCTGCAGTACCGACACCGAAGACCCCTGTaGTCCAGCTGCAGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: HKEQRRHPTTEKRCLQYRHRRPL*SSCSRP
Trigger: GGGCCTACTGCAGCTGGATCACAGGGGTCTTCGGTG...TCGGTACTGCAGACATCTCTTCTCCGTTGTCGGGTGCCGTCTCTGCTCCTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258955.7
ENST00000506211.1
CDS-3UTR GCA 90 bp CTGAGCAATAACCACAAGGAGCAGAGACGGCACCCGACAACGGAGAAGAGATGTGCATCGCAGGCCGAGTaGGTCCGTCCCAACAGCCGG +
Preference number: 4 (lower is better)
Translates to: LSNNHKEQRRHPTTEKRCASQAE*VRPNSR
Trigger: CCGGCTGTTGGGACGGACGCACTCGGCCTGCGATGC...ACATCTCTTCTCCGTTGTCGGGTGCCGTCTCTGCTCCTTGTGGTTATTGCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258955.7
ENST00000506211.1
CDS-3UTR GCA 90 bp GAGGCAGGAGGGTCAGCAAGAGAGAGTCCAGCACAGCCAGACCCTCCCAGGAACTGGTCATCACAGTGGTaGAGCAGTTCCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: EAGGSARESPAQPDPPRNWSSQW*SSSCSC
Trigger: GCAGCTGCAGGAACTGCTGCACCACTGTGATGACCA...GTTCCTGGGAGGGTCTGGCTGTGCTGGACTCTCTCTTGCTGACCCTCCTGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504284.1
ENST00000506211.1
ENST00000515221.2
CDS-3UTR GCA 90 bp GGGGCTCAGAAGAGTCTGTGTGGCTCCTACCACCCCAAACATATTCTGGTTTCCGGGCGAAGAGTGCGGTaGCCCGCTCCAGGGACAGCT +
Preference number: 4 (lower is better)
Translates to: GAQKSLCGSYHPKHILVSGRRVR*PAPGTA
Trigger: AGCTGTCCCTGGAGCGGGGCACCGCACTCTTCGCCC...GGAAACCAGAATATGTTTGGGGTGGTAGGAGCCACACAGACTCTTCTGAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR GCA 90 bp CAAACACATCCCACAGGGTCAGCTGGGGCTCAAACTGCTGCCAGTGAGCTCCAGCGCTCCAGCAGCTCCTaGACCTCCTTGTTCGCTCCA +
Preference number: 4 (lower is better)
Translates to: QTHPTGSAGAQTAASELQRSSSS*TSLFAP
Trigger: TGGAGCGAACAAGGAGGTGCAGGAGCTGCTGGAGCG...CTGGAGCTCACTGGCAGCAGTTTGAGCCCCAGCTGACCCTGTGGGATGTGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515221.2
CDS-3UTR TCA 90 bp TGCTCTGATCTTTCCCAGTTCTCAGAGTCCAGCAGGCCGCTGTGCTGGACACATAGCCGCAGCAGCGTCTaGGCTTCGGTCACCAGACAC +
Preference number: 4 (lower is better)
Translates to: CSDLSQFSESSRPLCWTHSRSSV*ASVTRH
Trigger: GTGTCTGGTGACCGAAGCTCAGACGCTGCTGCGGCT...ATGTGTCCAGCACAGCGGCCTGCTGGACTCTGAGAACTGGGAAAGATCAGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR TCA 90 bp GCCAAACAGCATCACCTCCTTCATCCAGTTGTCAGGCTCCAGTGTCTGGATCCGAGCCGCAGCAGCGTCTaGGCTTCGGTCACCAGACAC +
Preference number: 4 (lower is better)
Translates to: AKQHHLLHPVVRLQCLDPSRSSV*ASVTRH
Trigger: GTGTCTGGTGACCGAAGCTCAGACGCTGCTGCGGCT...CGGATCCAGACACTGGAGCCTGACAACTGGATGAAGGAGGTGATGCTGTTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504284.1
CDS-3UTR TCA 90 bp AGACGGCACCCGACAACGGAGAAGAGATGTCTGCAGTACCGACCCAGCTCTCAAGCCAGTGCTGGTGAGTaGTCCCCACATCGGTGCGTA +
Preference number: 4 (lower is better)
Translates to: RRHPTTEKRCLQYRPSSQASAGE*SPHRCV
Trigger: TACGCACCGATGTGGGGATCACTCACCAGCACTGGC...TTGAGAGCTGGGTCGGTACTGCAGACATCTCTTCTCCGTTGTCGGGTGCCGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258955.7
ENST00000506211.1
CDS-3UTR TCA 90 bp ACCACAAGGAGCAGAGACGGCACCCGACAACGGAGAAGAGATGTCTGCAGTACCTGCTGCCAGTGCTGGTaGGTGATCCCCACATCGGTG +
Preference number: 4 (lower is better)
Translates to: TTRSRDGTRQRRRDVCSTCCQCW*VIPTSV
Trigger: CACCGATGTGGGGATCACTCACCAGCACTGGCAGCA...GGTACTGCAGACATCTCTTCTCCGTTGTCGGGTGCCGTCTCTGCTCCTTGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258955.7
ENST00000506211.1
CDS-3UTR TCA 90 bp ACAGCCAGACCCTCCCAGGAACACCGAAGACCCCAGTCAGTCTTTCTCACTTCTTCAAACTGCTGCCAGTaGGCTCCAGCCTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: TARPSQEHRRPQSVFLTSSNCCQ*APACPG
Trigger: CCCTGGGCAGGCTGGAGCTCACTGGCAGCAGTTTGA...AGAAGTGAGAAAGACTGACTGGGGTCTTCGGTGTTCCTGGGAGGGTCTGGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515221.2
CDS-3UTR GCA 90 bp CCCAGTTCTCAGAGTCCAGCAGGCCGCTGTGCTGGACACATACATGGATCCACCCCTGTTAACCCCTGCTaGCCCGAACTCTGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: PSSQSPAGRCAGHIHGSTPVNPC*PELCQS
Trigger: AGACTGGCAGAGTTCGGGGCAGCAGGGGTTAACAGG...GGTGGATCCATGTATGTGTCCAGCACAGCGGCCTGCTGGACTCTGAGAACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR CCA 90 bp GCACCTCCTTGTTCGCTCCAAACACATCCCACAGGGTCAGCTGGGGCTCAAACTTCCCACAGGGTCAGCTaGGGCTCAAACTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: APPCSLQTHPTGSAGAQTSHRVS*GSNCCQ
Trigger: CTGGCAGCAGTTTGAGCCCCAGCTGACCCTGTGGGA...AGTTTGAGCCCCAGCTGACCCTGTGGGATGTGTTTGGAGCGAACAAGGAGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504284.1
ENST00000515221.2
CDS-3UTR CCA 90 bp GCTGAGGCAGGAGGGTCAGCAAGAGAGAGTCCAGCACAGCCAGACCCTCCCAGGCTCTCAAAACCCACCTaGCATTACCCTGGAACACAG +
Preference number: 4 (lower is better)
Translates to: AEAGGSARESPAQPDPPRLSKPT*HYPGTQ
Trigger: CTGTGTTCCAGGGTAATGCCAGGTGGGTTTTGAGAG...CCTGGGAGGGTCTGGCTGTGCTGGACTCTCTCTTGCTGACCCTCCTGCCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506211.1
CDS-3UTR CCA 90 bp CGCTCCAAACACATCCCACAGGGTCAGCTGGGGCTCAAACTGCTGCCAGTGAGCCTTCTCCTGGGTCTGTaGAGAGCTGTAGTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: RSKHIPQGQLGLKLLPVSLLLGL*RAVVRA
Trigger: AGCCCTGACTACAGCTCTCCACAGACCCAGGAGAAG...GCTCACTGGCAGCAGTTTGAGCCCCAGCTGACCCTGTGGGATGTGTTTGGAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515221.2
CDS-3UTR GCA 90 bp GGTAGAGGCTGGAAGCCTAAGAGCTATATTCCTCAGAATTTCCTGCCAGCCAGGTGCTGCCCCGAACTCTaGCAGTCTGGAGCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: GRGWKPKSYIPQNFLPARCCPEL*QSGARS
Trigger: GCTCCGGGCTCCAGACTGGCAGAGTTCGGGGCAGCA...CCTGGCTGGCAGGAAATTCTGAGGAATATAGCTCTTAGGCTTCCAGCCTCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR GCA 90 bp TGTCTGCAGTACCGACCCAGCTCTCAAAACCCACCTGGCATTACCCTGGAACACCGCTCCAGCAGCTCCTaGACCTCCTTGTTCGCTCCA +
Preference number: 4 (lower is better)
Translates to: CLQYRPSSQNPPGITLEHRSSSS*TSLFAP
Trigger: TGGAGCGAACAAGGAGGTGCAGGAGCTGCTGGAGCG...GTGTTCCAGGGTAATGCCAGGTGGGTTTTGAGAGCTGGGTCGGTACTGCAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258955.7
ENST00000506211.1
CDS-3UTR GCA 90 bp GTGCCATGGCCAAACAGCATCACCTCCTTCATCCAGTTGTCAGGCTCCAGTGTCCGCTCCAGCAGCTCCTaGACCTCCTTGTTCGCTCCA +
Preference number: 4 (lower is better)
Translates to: VPWPNSITSFIQLSGSSVRSSSS*TSLFAP
Trigger: TGGAGCGAACAAGGAGGTGCAGGAGCTGCTGGAGCG...GACACTGGAGCCTGACAACTGGATGAAGGAGGTGATGCTGTTTGGCCATGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504284.1
CDS-3UTR CCA 90 bp GAAGAGATGTCTGCAGTACCGACCCAGCTCTCAAAACCCACCTGGCATTACCCTACAGCCCGGCCCCTCTaGTACATCTCAGCTGCGAGC +
Preference number: 4 (lower is better)
Translates to: EEMSAVPTQLSKPTWHYPTARPL*YISAAS
Trigger: GCTCGCAGCTGAGATGTACCAGAGGGGCCGGGCTGT...AGGGTAATGCCAGGTGGGTTTTGAGAGCTGGGTCGGTACTGCAGACATCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258955.7
ENST00000506211.1
CDS-3UTR CCA 90 bp GAGGCAGGAGGGTCAGCAAGAGAGAGTCCAGCACAGCCAGACCCTCCCAGGAACCATTCCGGGCAAAGTTaGAGACCTCATACTGGTGGA +
Preference number: 4 (lower is better)
Translates to: EAGGSARESPAQPDPPRNHSGQS*RPHTGG
Trigger: TCCACCAGTATGAGGTCTCCAACTTTGCCCGGAATG...GTTCCTGGGAGGGTCTGGCTGTGCTGGACTCTCTCTTGCTGACCCTCCTGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504284.1
ENST00000506211.1
ENST00000515221.2
CDS-3UTR CCA 90 bp GTGCCATGGCCAAACAGCATCACCTCCTTCATCCAGTTGTCAGGCTCCAGTGTCTGGCCTCCAGCCCCCTaGGGCATAAATCGTCCATGG +
Preference number: 4 (lower is better)
Translates to: VPWPNSITSFIQLSGSSVWPPAP*GINRPW
Trigger: CCATGGACGATTTATGCCCCAGGGGGCTGGAGGCCA...GACACTGGAGCCTGACAACTGGATGAAGGAGGTGATGCTGTTTGGCCATGGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504284.1
CDS-3UTR CCA 90 bp GTCTGCAGTACCGACCCAGCTCTCAAAACCCACCTGGCATTACCCTGGAACACATGGCCTCCAGCCCCCTaGGGCATAAATCGTCCATGG +
Preference number: 4 (lower is better)
Translates to: VCSTDPALKTHLALPWNTWPPAP*GINRPW
Trigger: CCATGGACGATTTATGCCCCAGGGGGCTGGAGGCCA...TGTGTTCCAGGGTAATGCCAGGTGGGTTTTGAGAGCTGGGTCGGTACTGCAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258955.7
ENST00000506211.1
CDS-3UTR CCA 90 bp TGCTGCTGGAAGCTGAGACCATCAGCAGGAGTTTTCTGTGCCTCCTGCAAGTTGTCAGGCTCCAGTGTCTaGATCCGAGCCTCCCGGGTG +
Preference number: 4 (lower is better)
Translates to: CCWKLRPSAGVFCASCKLSGSSV*IRASRV
Trigger: CACCCGGGAGGCTCGGATCCAGACACTGGAGCCTGA...CAACTTGCAGGAGGCACAGAAAACTCCTGCTGATGGTCTCAGCTTCCAGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR CCA 90 bp ACAGCCAGACCCTCCCAGGAACACCGAAGACCCCAGTCAGTCTTTCTCACTTCTGTAGTCAGGGCTCCCTaGTATGCCTCAGCCCCCTCT +
Preference number: 4 (lower is better)
Translates to: TARPSQEHRRPQSVFLTSVVRAP*YASAPS
Trigger: AGAGGGGGCTGAGGCATACCAGGGAGCCCTGACTAC...AGAAGTGAGAAAGACTGACTGGGGTCTTCGGTGTTCCTGGGAGGGTCTGGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515221.2
CDS-3UTR GCA 90 bp ACGGCACCCGACAACGGAGAAGAGATGTCTGCAGTACCGACCCAGCTCTCAAAAGGACACGCTTCCGGGTaGCATGGCCAAACAGCATCA +
Preference number: 4 (lower is better)
Translates to: TAPDNGEEMSAVPTQLSKGHASG*HGQTAS
Trigger: TGATGCTGTTTGGCCATGGCACCCGGAAGCGTGTCC...TTTTGAGAGCTGGGTCGGTACTGCAGACATCTCTTCTCCGTTGTCGGGTGCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR TCA 90 bp ACGGAGAAGAGATGTCTGCAGTACCGACCCAGCTCTCAAAACCCACCTGGCATTTCCAATTGTGGGTACTaGGCGCCCCATTCCGGGCAA +
Preference number: 4 (lower is better)
Translates to: TEKRCLQYRPSSQNPPGISNCGY*APHSGQ
Trigger: TTGCCCGGAATGGGGCGCTCAGTACCCACAATTGGA...AATGCCAGGTGGGTTTTGAGAGCTGGGTCGGTACTGCAGACATCTCTTCTCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258955.7
ENST00000506211.1
CDS-3UTR TCA 90 bp ATGTCTGCAGTACCGACCCAGCTCTCAAAACCCACCTGGCATTACCCTGGAACATGGGGATGCCAGGGCTaGGCAATAACCACAAGGAGC +
Preference number: 4 (lower is better)
Translates to: MSAVPTQLSKPTWHYPGTWGCQG*AITTRS
Trigger: GCTCCTTGTGGTTATTGCTCAGCCCTGGCATCCCCA...TGTTCCAGGGTAATGCCAGGTGGGTTTTGAGAGCTGGGTCGGTACTGCAGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258955.7
ENST00000506211.1
CDS-3UTR TCA 90 bp CTGAGCAATAACCACAAGGAGCAGAGACGGCACCCGACAACGGAGAAGAGATGTTGGGGATGCCAGGGCTaGGCAATAACCACAAGGAGC +
Preference number: 4 (lower is better)
Translates to: LSNNHKEQRRHPTTEKRCWGCQG*AITTRS
Trigger: GCTCCTTGTGGTTATTGCTCAGCCCTGGCATCCCCA...ACATCTCTTCTCCGTTGTCGGGTGCCGTCTCTGCTCCTTGTGGTTATTGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258955.7
ENST00000506211.1
CDS-3UTR TCA 90 bp CACCCGACAACGGAGAAGAGATGTCTGCAGTACCGACCCAGCTCTCAAAACCCAGGGATGCCAGTTCCCTaGCCAGAAATGTCCTCCCAT +
Preference number: 4 (lower is better)
Translates to: HPTTEKRCLQYRPSSQNPGMPVP*PEMSSH
Trigger: ATGGGAGGACATTTCTGGTCAGGGAACTGGCATCCC...TGGGTTTTGAGAGCTGGGTCGGTACTGCAGACATCTCTTCTCCGTTGTCGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR TCA 90 bp AACCACAAGGAGCAGAGACGGCACCCGACAACGGAGAAGAGATGTCTGCAGTACTTGGCCTGTGAGTCCTaGGATGCTGAATGGGATGCC +
Preference number: 4 (lower is better)
Translates to: NHKEQRRHPTTEKRCLQYLACES*DAEWDA
Trigger: GGCATCCCATTCAGCATCTCAGGACTCACAGGCCAA...GTACTGCAGACATCTCTTCTCCGTTGTCGGGTGCCGTCTCTGCTCCTTGTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR GCA 90 bp AGAGGCTGGAAGCCTAAGAGCTATATTCCTCAGAATTTCCTGCCAGCCAGGATTAGCAGTTCCTGCAGCTaGCCAAGCCACGGCCCCACC +
Preference number: 4 (lower is better)
Translates to: RGWKPKSYIPQNFLPARISSSCS*PSHGPT
Trigger: GGTGGGGCCGTGGCTTGGGCAGCTGCAGGAACTGCT...AATCCTGGCTGGCAGGAAATTCTGAGGAATATAGCTCTTAGGCTTCCAGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR GCA 90 bp TGCTCTGATCTTTCCCAGTTCTCAGAGTCCAGCAGGCCGCTGTGCTGGACACATTGGTCATCACAGTGGTaGAGCAGTTCCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: CSDLSQFSESSRPLCWTHWSSQW*SSSCSC
Trigger: GCAGCTGCAGGAACTGCTGCACCACTGTGATGACCA...ATGTGTCCAGCACAGCGGCCTGCTGGACTCTGAGAACTGGGAAAGATCAGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR GCA 90 bp CACCCGACAACGGAGAAGAGATGTCTGCAGTACCGACCCAGCTCTCAAAACCCACGGAGAAGAGATGTCTaGAGTACCGACCCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: HPTTEKRCLQYRPSSQNPRRRDV*STDPAL
Trigger: GAGAGCTGGGTCGGTACTGCAGACATCTCTTCTCCG...TGGGTTTTGAGAGCTGGGTCGGTACTGCAGACATCTCTTCTCCGTTGTCGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258955.7
ENST00000506211.1
CDS-3UTR GCA 90 bp CCCAGTTCTCAGAGTCCAGCAGGCCGCTGTGCTGGACACATACATGGATCCACCTTCTGTGTTCTCTCCTaGATGGTAGAGGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: PSSQSPAGRCAGHIHGSTFCVLS*MVEAGS
Trigger: GCTTCCAGCCTCTACCATGCAGGAGAGAACACAGAA...GGTGGATCCATGTATGTGTCCAGCACAGCGGCCTGCTGGACTCTGAGAACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR CCA 90 bp AGAAGAGATGTCTGCAGTACCGACCCAGCTCTCAAAACCCACCTGGCATTACCCGAGACCTCATACTGGTaGAAGCCAGCCTCCCGAAGG +
Preference number: 4 (lower is better)
Translates to: RRDVCSTDPALKTHLALPETSYW*KPASRR
Trigger: CCTTCGGGAGGCTGGCTTCCACCAGTATGAGGTCTC...GGGTAATGCCAGGTGGGTTTTGAGAGCTGGGTCGGTACTGCAGACATCTCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258955.7
ENST00000506211.1
CDS-3UTR CCA 90 bp ACAGCCAGACCCTCCCAGGAACACCGAAGACCCCAGTCAGTCTTTCTCACTTCTTTGGAGACCTCATACTaGTGGAAGCCAGCCTCCCGA +
Preference number: 4 (lower is better)
Translates to: TARPSQEHRRPQSVFLTSLETSY*WKPASR
Trigger: TCGGGAGGCTGGCTTCCACCAGTATGAGGTCTCCAA...AGAAGTGAGAAAGACTGACTGGGGTCTTCGGTGTTCCTGGGAGGGTCTGGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515221.2
CDS-3UTR CCA 90 bp GTCTGCAGTACCGACCCAGCTCTCAAAACCCACCTGGCATTACCCTGGAACACAAGCAGGCCGCTGTGCTaGACACATACATGGATCCAC +
Preference number: 4 (lower is better)
Translates to: VCSTDPALKTHLALPWNTSRPLC*THTWIH
Trigger: GTGGATCCATGTATGTGTCCAGCACAGCGGCCTGCT...TGTGTTCCAGGGTAATGCCAGGTGGGTTTTGAGAGCTGGGTCGGTACTGCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR GCA 90 bp ACGGAGAAGAGATGTCTGCAGTACCGACCCAGCTCTCAAAACCCACCTGGCATTTGGTCATCACAGTGGTaGAGCAGTTCCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: TEKRCLQYRPSSQNPPGIWSSQW*SSSCSC
Trigger: GCAGCTGCAGGAACTGCTGCACCACTGTGATGACCA...AATGCCAGGTGGGTTTTGAGAGCTGGGTCGGTACTGCAGACATCTCTTCTCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258955.7
ENST00000506211.1
CDS-3UTR CCA 90 bp ACGGAGAAGAGATGTCTGCAGTACCGACCCAGCTCTCAAAACCCACCTGGCATTAGGTGGTCATCACAGTaGTGCAGCAGTTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: TEKRCLQYRPSSQNPPGIRWSSQ*CSSSCS
Trigger: GCTGCAGGAACTGCTGCACCACTGTGATGACCACCT...AATGCCAGGTGGGTTTTGAGAGCTGGGTCGGTACTGCAGACATCTCTTCTCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258955.7
ENST00000506211.1
CDS-3UTR CCA 90 bp CCAAACAGCATCACCTCCTTCATCCAGTTGTCAGGCTCCAGTGTCTGGATCCGAAGGTGGTCATCACAGTaGTGCAGCAGTTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PNSITSFIQLSGSSVWIRRWSSQ*CSSSCS
Trigger: GCTGCAGGAACTGCTGCACCACTGTGATGACCACCT...TCGGATCCAGACACTGGAGCCTGACAACTGGATGAAGGAGGTGATGCTGTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504284.1
CDS-3UTR CCA 90 bp AGAAGAGATGTCTGCAGTACCGACCCAGCTCTCAAAACCCACCTGGCATTACCCTTGGAGACCTCATACTaGTGGAAGCCAGCCTCCCGA +
Preference number: 4 (lower is better)
Translates to: RRDVCSTDPALKTHLALPLETSY*WKPASR
Trigger: TCGGGAGGCTGGCTTCCACCAGTATGAGGTCTCCAA...GGGTAATGCCAGGTGGGTTTTGAGAGCTGGGTCGGTACTGCAGACATCTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258955.7
ENST00000506211.1
CDS-3UTR CCA 90 bp GCACCTCCTTGTTCGCTCCAAACACATCCCACAGGGTCAGCTGGGGCTCAAACTCATTCCGGGCAAAGTTaGAGACCTCATACTGGTGGA +
Preference number: 4 (lower is better)
Translates to: APPCSLQTHPTGSAGAQTHSGQS*RPHTGG
Trigger: TCCACCAGTATGAGGTCTCCAACTTTGCCCGGAATG...AGTTTGAGCCCCAGCTGACCCTGTGGGATGTGTTTGGAGCGAACAAGGAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504284.1
ENST00000515221.2
CDS-3UTR CCA 90 bp GCTCCTACCACCCCAAACATATTCTGGTTTCCCGAAGATAAGAGGCAAGGCTTGGGCATAAATCGTCCATaGGCCCCAGGCCCAACGCCA +
Preference number: 4 (lower is better)
Translates to: APTTPNIFWFPEDKRQGLGINRP*APGPTP
Trigger: TGGCGTTGGGCCTGGGGCCCATGGACGATTTATGCC...CAAGCCTTGCCTCTTATCTTCGGGAAACCAGAATATGTTTGGGGTGGTAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR CCA 90 bp TGGATCCACCAACATACATCAGTCCTTCTGTGTTCTCTCCTGCATGGTAGAGGCTCCCACAGGGTCAGCTaGGGCTCAAACTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: WIHQHTSVLLCSLLHGRGSHRVS*GSNCCQ
Trigger: CTGGCAGCAGTTTGAGCCCCAGCTGACCCTGTGGGA...GCCTCTACCATGCAGGAGAGAACACAGAAGGACTGATGTATGTTGGTGGATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR CCA 90 bp CACCCGACAACGGAGAAGAGATGTCTGCAGTACCGACCCAGCTCTCAAAACCCACATTCCGGGCAAAGTTaGAGACCTCATACTGGTGGA +
Preference number: 4 (lower is better)
Translates to: HPTTEKRCLQYRPSSQNPHSGQS*RPHTGG
Trigger: TCCACCAGTATGAGGTCTCCAACTTTGCCCGGAATG...TGGGTTTTGAGAGCTGGGTCGGTACTGCAGACATCTCTTCTCCGTTGTCGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258955.7
ENST00000506211.1
CDS-3UTR CCA 90 bp TGGGTGGTAGGCAATTCCCAGCCATGGAACACATGTTGGCCTGTGAGTCCTGAGCTCTCAAAACCCACCTaGCATTACCCTGGAACACAG +
Preference number: 4 (lower is better)
Translates to: WVVGNSQPWNTCWPVSPELSKPT*HYPGTQ
Trigger: CTGTGTTCCAGGGTAATGCCAGGTGGGTTTTGAGAG...CTCAGGACTCACAGGCCAACATGTGTTCCATGGCTGGGAATTGCCTACCACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR GCA 90 bp AGAGGCTGGAAGCCTAAGAGCTATATTCCTCAGAATTTCCTGCCAGCCAGGATTCAACCTGTTAACCCCTaGTGCCCCGAACTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: RGWKPKSYIPQNFLPARIQPVNP*CPELCQ
Trigger: CTGGCAGAGTTCGGGGCAGCAGGGGTTAACAGGTTG...AATCCTGGCTGGCAGGAAATTCTGAGGAATATAGCTCTTAGGCTTCCAGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR GCA 90 bp TCTGCAGTACCGACCCAGCTCTCAAAACCCACCTGGCATTACCCTGGAACACAGCATCATCTGCTTTTGTaGTGCTGGAAGCTGAGACCA +
Preference number: 4 (lower is better)
Translates to: SAVPTQLSKPTWHYPGTQHHLLL*CWKLRP
Trigger: TGGTCTCAGCTTCCAGCAGCACAAAAGCAGATGATG...CTGTGTTCCAGGGTAATGCCAGGTGGGTTTTGAGAGCTGGGTCGGTACTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR GCA 90 bp GCTCCTACCACCCCAAACATATTCTGGTTTCCCGAAGATAAGAGGCAAGGCTTGTCCAGCAGGCCGCTGTaGTGGACACATACATGGATC +
Preference number: 4 (lower is better)
Translates to: APTTPNIFWFPEDKRQGLSSRPL*WTHTWI
Trigger: GATCCATGTATGTGTCCAGCACAGCGGCCTGCTGGA...CAAGCCTTGCCTCTTATCTTCGGGAAACCAGAATATGTTTGGGGTGGTAGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR CCA 90 bp AATAACCACAAGGAGCAGAGACGGCACCCGACAACGGAGAAGAGATGTCTGCAGCATTCCGGGCAAAGTTaGAGACCTCATACTGGTGGA +
Preference number: 4 (lower is better)
Translates to: NNHKEQRRHPTTEKRCLQHSGQS*RPHTGG
Trigger: TCCACCAGTATGAGGTCTCCAACTTTGCCCGGAATG...CTGCAGACATCTCTTCTCCGTTGTCGGGTGCCGTCTCTGCTCCTTGTGGTTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258955.7
ENST00000506211.1
CDS-3UTR CCA 90 bp CTCACAGTTGCTACTGGCTTTCTCCAATGTTCACTTCTCTATCCCTTTCAGTGGTGGCCTCCAGCCCCCTaGGGCATAAATCGTCCATGG +
Preference number: 4 (lower is better)
Translates to: LTVATGFLQCSLLYPFQWWPPAP*GINRPW
Trigger: CCATGGACGATTTATGCCCCAGGGGGCTGGAGGCCA...CCACTGAAAGGGATAGAGAAGTGAACATTGGAGAAAGCCAGTAGCAACTGTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR CCA 90 bp GGTAGAGGCTGGAAGCCTAAGAGCTATATTCCTCAGAATTTCCTGCCAGCCAGGTTCCTTCTCCAGCAGTaGCAGACAGTAGGCATGAGG +
Preference number: 4 (lower is better)
Translates to: GRGWKPKSYIPQNFLPARFLLQQ*QTVGMR
Trigger: CCTCATGCCTACTGTCTGCCACTGCTGGAGAAGGAA...CCTGGCTGGCAGGAAATTCTGAGGAATATAGCTCTTAGGCTTCCAGCCTCTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR TCA 90 bp TCCCTTTCAGTGGTTTATAAATACTTCATTCCTATAGTAGATCCCTTCCTGCTTCCCGTTGCACCCCGCTaGGCCGCAGCAGCGTCTGAG +
Preference number: 4 (lower is better)
Translates to: SLSVVYKYFIPIVDPFLLPVAPR*AAAASE
Trigger: CTCAGACGCTGCTGCGGCTCAGCGGGGTGCAACGGG...AAGCAGGAAGGGATCTACTATAGGAATGAAGTATTTATAAACCACTGAAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR GCA 90 bp CCGACAACGGAGAAGAGATGTCTGCAGTACCGACCCAGCTCTCAAAACCCACCTTTCCAGTACATCATCTaGTTTTGTGCTGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: PTTEKRCLQYRPSSQNPPFQYII*FCAAGS
Trigger: GCTTCCAGCAGCACAAAAGCAGATGATGTACTGGAA...AGGTGGGTTTTGAGAGCTGGGTCGGTACTGCAGACATCTCTTCTCCGTTGTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR GCA 90 bp CACAAGGAGCAGAGACGGCACCCGACAACGGAGAAGAGATGTCTGCAGTACCGATTCCTCAGAATTTCCTaGCAGCCAGGATTTGCTTTA +
Preference number: 4 (lower is better)
Translates to: HKEQRRHPTTEKRCLQYRFLRIS*QPGFAL
Trigger: TAAAGCAAATCCTGGCTGGCAGGAAATTCTGAGGAA...TCGGTACTGCAGACATCTCTTCTCCGTTGTCGGGTGCCGTCTCTGCTCCTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR CCA 90 bp CTAAGAGCTATATTCCTCAGAATTTCCTGCCAGCCAGGATTTGCTTTAAAGTCCACAGCAGCCACCGTGTaGGGACTGGCTAGACTGGGG +
Preference number: 4 (lower is better)
Translates to: LRAIFLRISCQPGFALKSTAATV*GLARLG
Trigger: CCCCAGTCTAGCCAGTCCCCACACGGTGGCTGCTGT...GGACTTTAAAGCAAATCCTGGCTGGCAGGAAATTCTGAGGAATATAGCTCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR CCA 90 bp TCCCTTTCAGTGGTTTATAAATACTTCATTCCTATAGTAGATCCCTTCCTGCTTCCACCGTGTGGGGACTaGCTAGACTGGGGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: SLSVVYKYFIPIVDPFLLPPCGD*LDWGSP
Trigger: GGGGGACCCCCAGTCTAGCCAGTCCCCACACGGTGG...AAGCAGGAAGGGATCTACTATAGGAATGAAGTATTTATAAACCACTGAAAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR CCA 90 bp TTTGTAGCATCTTCTGAGCATTTTCCAGTACATCATCTGCTTTTGTGCTGCTGGCGCTTCCGGGTGCCATaGCCAAACAGCATCACCTCC +
Preference number: 4 (lower is better)
Translates to: FVASSEHFPVHHLLLCCWRFRVP*PNSITS
Trigger: GGAGGTGATGCTGTTTGGCCATGGCACCCGGAAGCG...CCAGCAGCACAAAAGCAGATGATGTACTGGAAAATGCTCAGAAGATGCTACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR CCA 90 bp CCATCAGCAGGAGTTTTCTGTGCCTCCTGCAAGTTGCTGATTTCTCACAGTTGCCCATGGAACACATGTTaGCCTGTGAGTCCTGAGATG +
Preference number: 4 (lower is better)
Translates to: PSAGVFCASCKLLISHSCPWNTC*PVSPEM
Trigger: CATCTCAGGACTCACAGGCCAACATGTGTTCCATGG...GCAACTGTGAGAAATCAGCAACTTGCAGGAGGCACAGAAAACTCCTGCTGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR CCA 90 bp AATAACCACAAGGAGCAGAGACGGCACCCGACAACGGAGAAGAGATGTCTGCAGCTGCATGGTAGAGGCTaGAAGCCTAAGAGCTATATT +
Preference number: 4 (lower is better)
Translates to: NNHKEQRRHPTTEKRCLQLHGRG*KPKSYI
Trigger: AATATAGCTCTTAGGCTTCCAGCCTCTACCATGCAG...CTGCAGACATCTCTTCTCCGTTGTCGGGTGCCGTCTCTGCTCCTTGTGGTTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR CCA 90 bp TGGATCCACCAACATACATCAGTCCTTCTGTGTTCTCTCCTGCATGGTAGAGGCTCAGAAGAGTCTGTGTaGCTCCTACCACCCCAAACA +
Preference number: 4 (lower is better)
Translates to: WIHQHTSVLLCSLLHGRGSEESV*LLPPQT
Trigger: TGTTTGGGGTGGTAGGAGCCACACAGACTCTTCTGA...GCCTCTACCATGCAGGAGAGAACACAGAAGGACTGATGTATGTTGGTGGATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR TCA 90 bp ACCACAAGGAGCAGAGACGGCACCCGACAACGGAGAAGAGATGTCTGCAGTACCTTTTGTAGCATCTTCTaGGCATTTTCCAGTACATCA +
Preference number: 4 (lower is better)
Translates to: TTRSRDGTRQRRRDVCSTFCSIF*AFSSTS
Trigger: TGATGTACTGGAAAATGCTCAGAAGATGCTACAAAA...GGTACTGCAGACATCTCTTCTCCGTTGTCGGGTGCCGTCTCTGCTCCTTGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR GCA 90 bp ATGTCTGCAGTACCGACCCAGCTCTCAAAACCCACCTGGCATTACCCTGGAACACTGATTTCTCACAGTTaGTACTGGCTTTCTCCAATG +
Preference number: 4 (lower is better)
Translates to: MSAVPTQLSKPTWHYPGTLISHS*YWLSPM
Trigger: CATTGGAGAAAGCCAGTAGCAACTGTGAGAAATCAG...TGTTCCAGGGTAATGCCAGGTGGGTTTTGAGAGCTGGGTCGGTACTGCAGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR GCA 90 bp CAGTTGCTACTGGCTTTCTCCAATGTTCACTTCTCTATCCCTTTCAGTGGTTTACGGAGAAGAGATGTCTaGAGTACCGACCCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: QLLLAFSNVHFSIPFSGLRRRDV*STDPAL
Trigger: GAGAGCTGGGTCGGTACTGCAGACATCTCTTCTCCG...TAAACCACTGAAAGGGATAGAGAAGTGAACATTGGAGAAAGCCAGTAGCAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR GCA 90 bp TTTGTAGCATCTTCTGAGCATTTTCCAGTACATCATCTGCTTTTGTGCTGCTGGTCCCATCTACCTCACTaGTGCCATTCCCCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: FVASSEHFPVHHLLLCCWSHLPH*CHSPGD
Trigger: ATCCCCAGGGGAATGGCAGCAGTGAGGTAGATGGGA...CCAGCAGCACAAAAGCAGATGATGTACTGGAAAATGCTCAGAAGATGCTACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR CCA 90 bp TTTGTAGCATCTTCTGAGCATTTTCCAGTACATCATCTGCTTTTGTGCTGCTGGTTGGAGACCTCATACTaGTGGAAGCCAGCCTCCCGA +
Preference number: 4 (lower is better)
Translates to: FVASSEHFPVHHLLLCCWLETSY*WKPASR
Trigger: TCGGGAGGCTGGCTTCCACCAGTATGAGGTCTCCAA...CCAGCAGCACAAAAGCAGATGATGTACTGGAAAATGCTCAGAAGATGCTACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR CCA 90 bp CTCACAGTTGCTACTGGCTTTCTCCAATGTTCACTTCTCTATCCCTTTCAGTGGAAACAGAAGCTGATGTaGGTGGTAGGCAATTCCCAG +
Preference number: 4 (lower is better)
Translates to: LTVATGFLQCSLLYPFQWKQKLM*VVGNSQ
Trigger: CTGGGAATTGCCTACCACCCACATCAGCTTCTGTTT...CCACTGAAAGGGATAGAGAAGTGAACATTGGAGAAAGCCAGTAGCAACTGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR CCA 90 bp AATAACCACAAGGAGCAGAGACGGCACCCGACAACGGAGAAGAGATGTCTGCAGGAATTACAAACACTTTaGGTCTTTCCCGAATTCTCT +
Preference number: 4 (lower is better)
Translates to: NNHKEQRRHPTTEKRCLQELQTL*VFPEFS
Trigger: AGAGAATTCGGGAAAGACCCAAAGTGTTTGTAATTC...CTGCAGACATCTCTTCTCCGTTGTCGGGTGCCGTCTCTGCTCCTTGTGGTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR GCA 90 bp TCCCTTTCAGTGGTTTATAAATACTTCATTCCTATAGTAGATCCCTTCCTGCTTTGTGACTTCCAAGTCTaGAGGCAGGTGGGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: SLSVVYKYFIPIVDPFLLCDFQV*RQVGCL
Trigger: CAGGCAGCCCACCTGCCTGCAGACTTGGAAGTCACA...AAGCAGGAAGGGATCTACTATAGGAATGAAGTATTTATAAACCACTGAAAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR TCA 90 bp GACATGGTTTTCCTGATTCATCCAGCTATCTTAGGACCTTACTCCAAAATAAGGAGGCAAGGCTTGCTCTaGTCTTTCCCAGTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: DMVFLIHPAILGPYSKIRRQGLL*SFPVLR
Trigger: TCTGAGAACTGGGAAAGATCAGAGCAAGCCTTGCCT...CCTTATTTTGGAGTAAGGTCCTAAGATAGCTGGATGAATCAGGAAAACCATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR CCA 90 bp GTTTTCCTGATTCATCCAGCTATCTTAGGACCTTACTCCAAAATAAGGAAGGCTCTGCTTTTGTGCTGCTaGAAGCTGAGACCATCAGCA +
Preference number: 4 (lower is better)
Translates to: VFLIHPAILGPYSKIRKALLLCC*KLRPSA
Trigger: TGCTGATGGTCTCAGCTTCCAGCAGCACAAAAGCAG...AGCCTTCCTTATTTTGGAGTAAGGTCCTAAGATAGCTGGATGAATCAGGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR CCA 90 bp CTCACAGTTGCTACTGGCTTTCTCCAATGTTCACTTCTCTATCCCTTTCAGTGGACCCCAAACATATTCTaGTTTCCCGAAGATAAGAGG +
Preference number: 4 (lower is better)
Translates to: LTVATGFLQCSLLYPFQWTPNIF*FPEDKR
Trigger: CCTCTTATCTTCGGGAAACCAGAATATGTTTGGGGT...CCACTGAAAGGGATAGAGAAGTGAACATTGGAGAAAGCCAGTAGCAACTGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258955.7
3UTR CAA 72 bp TTTCTGTGCCTCCTGCAAGTTGCTGATTTCTCACAGTaGCTACTGGCTTTCTCCAATGTTCACTTCTCTATC +
Preference number: 4 (lower is better)
Translates to: FLCLLQVADFSQ*LLAFSNVHFSI
Trigger: GATAGAGAAGTGAACATTGGAGAAAGCCAGTAGCAACTGTGAGAAATCAGCAACTTGCAGGAGGCACAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR GCA 90 bp GTTTTCCTGATTCATCCAGCTATCTTAGGACCTTACTCCAAAATAAGGAAGGCTAGCAGGAGTTTTCTGTaGCTCCTGCAAGTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: VFLIHPAILGPYSKIRKASRSFL*LLQVAD
Trigger: ATCAGCAACTTGCAGGAGGCACAGAAAACTCCTGCT...AGCCTTCCTTATTTTGGAGTAAGGTCCTAAGATAGCTGGATGAATCAGGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR CCA 90 bp GATCCCTTCCTGCTTATATTAATAATACCTAGAGGGGACATGGTTTTCCTGATTGTGTCATCTAGGGACTaGAGGCCTATAGACAACCTG +
Preference number: 4 (lower is better)
Translates to: DPFLLILIIPRGDMVFLIVSSRD*RPIDNL
Trigger: CAGGTTGTCTATAGGCCTCCAGTCCCTAGATGACAC...AATCAGGAAAACCATGTCCCCTCTAGGTATTATTAATATAAGCAGGAAGGGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR GCA 90 bp TCCCTTTCAGTGGTTTATAAATACTTCATTCCTATAGTAGATCCCTTCCTGCTTATAAGAGGCAAGGCTTaGTCTGATCTTTCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: SLSVVYKYFIPIVDPFLLIRGKA*SDLSQF
Trigger: GAACTGGGAAAGATCAGAGCAAGCCTTGCCTCTTAT...AAGCAGGAAGGGATCTACTATAGGAATGAAGTATTTATAAACCACTGAAAGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS GCA 90 bp AAGCGCCGCGCGCCGGCCCGCAGGCTCAGGACTCGGGGACCCTCCTaGGTTCTCCACGCGGCGGCGCCTCTGGGCCGCTCTGGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: KRRAPARRLRTRGPS*VLHAAAPLGRSGCC
Trigger: GCAGCAGCCAGAGCGGCCCAGAGGCGCCGCCGCGTGGAGAACGCAGGAGGGTCCCCGAGTCCTGAGCCTGCGGGCCGGCGCGCGGCGCTT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258955.7
ENST00000443328.2
ENST00000504284.1
ENST00000515221.2
CDS CCA 90 bp TCAGGACTCGGGGACCCTCCTGCGTTCTCCACGCGGCGGCGCCTCTaGGCCGCTCTGGCTGCTGCCGCCCAGCCGCGAGCCCGGGCTCCG +
Preference number: 5 (lower is better)
Translates to: SGLGDPPAFSTRRRL*AALAAAAQPRARAP
Trigger: CGGAGCCCGGGCTCGCGGCTGGGCGGCAGCAGCCAGAGCGGCCCAGAGGCGCCGCCGCGTGGAGAACGCAGGAGGGTCCCCGAGTCCTGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258955.7
ENST00000443328.2
ENST00000515221.2
CDS GCA 90 bp AGGCGCCGGGCCTCTGCCAGCGTCCGCAGAGCATCGCAGGCCGAGTaGGTCCGTCCCAACAGCCGGAGCTCAGTGTCATCTAGGGACTGG +
Preference number: 5 (lower is better)
Translates to: RRRASASVRRASQAE*VRPNSRSSVSSRDW
Trigger: CCAGTCCCTAGATGACACTGAGCTCCGGCTGTTGGGACGGACGCACTCGGCCTGCGATGCTCTGCGGACGCTGGCAGAGGCCCGGCGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS GCA 90 bp AGGCGCCGGGCCTCTGCCAGCGTCCGCAGAGCATCGCAGGCCGAGTaGGTCCGTCCCAACAGCCGGAGCTCAGTGTCATCTAGGGACGTT +
Preference number: 5 (lower is better)
Translates to: RRRASASVRRASQAE*VRPNSRSSVSSRDV
Trigger: AACGTCCCTAGATGACACTGAGCTCCGGCTGTTGGGACGGACGCACTCGGCCTGCGATGCTCTGCGGACGCTGGCAGAGGCCCGGCGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504284.1
CDS GCA 90 bp AGGCGCCGGGCCTCTGCCAGCGTCCGCAGAGCATCGCAGGCCGAGTaGGTCCGTCCCAACAGCCGGAGCTCAGTGTCATCTAGGGAGTGT +
Preference number: 5 (lower is better)
Translates to: RRRASASVRRASQAE*VRPNSRSSVSSREC
Trigger: ACACTCCCTAGATGACACTGAGCTCCGGCTGTTGGGACGGACGCACTCGGCCTGCGATGCTCTGCGGACGCTGGCAGAGGCCCGGCGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515221.2
CDS-3UTR CAA 90 bp CCAGTGAGCTCCAGCCTGCCCAGGGGGACACGCTTCCGGGTGCCATGGCCAAACCTGCTGCCAGGCTTCTaGGAGCTGAGGCAGGAGGGT +
Preference number: 5 (lower is better)
Translates to: PVSSSLPRGTRFRVPWPNLLPGF*ELRQEG
Trigger: ACCCTCCTGCCTCAGCTCCAAGAAGCCTGGCAGCAG...GTTTGGCCATGGCACCCGGAAGCGTGTCCCCCTGGGCAGGCTGGAGCTCACTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515221.2
CDS TCA 90 bp GACCTCGTACGGGGGCACGGAAACACGGCAGGCGGGTTCATAGAGTaGCAAACCGCCACCTGGGTTTTGGACGGCCACGGTCACGGCCAG +
Preference number: 5 (lower is better)
Translates to: DLVRGHGNTAGGFIE*QTATWVLDGHGHGQ
Trigger: CTGGCCGTGACCGTGGCCGTCCAAAACCCAGGTGGCGGTTTGTCACTCTATGAACCCGCCTGCCGTGTTTCCGTGCCCCCGTACGAGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510554.1
CDS GCA 90 bp TCCTGGAGGAGAGCCCTGTGCCCTTGGATGCTCACAGCTCCAGCCTaGCCAGGGGGACACGCTTCCGGGTGCCATGGCCAAACAGCATCA +
Preference number: 5 (lower is better)
Translates to: SWRRALCPWMLTAPA*PGGHASGCHGQTAS
Trigger: TGATGCTGTTTGGCCATGGCACCCGGAAGCGTGTCCCCCTGGGCAGGCTGGAGCTGTGAGCATCCAAGGGCACAGGGCTCTCCTCCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509398.1
CDS TCA 90 bp AACACAGACTCCACCCGTTGCACCCCGCTGAGCCGCAGCAGCGTCTaGGCTTCGGTCACCAGACACTTCTGCATGGCAGCCTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: NTDSTRCTPLSRSSV*ASVTRHFCMAASSR
Trigger: CCTGGAGGAGGCTGCCATGCAGAAGTGTCTGGTGACCGAAGCTCAGACGCTGCTGCGGCTCAGCGGGGTGCAACGGGTGGAGTCTGTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258955.7
ENST00000443328.2
ENST00000510554.1
CDS CCA 90 bp ATCCAGTTGTCAGGCTCCAGTGTCTGGATCCGAGCCTCCCGGGTGTaGCCTCCAGCCCCCTGGGGCATAAATCGTCCATGGGCCCATTCC +
Preference number: 5 (lower is better)
Translates to: IQLSGSSVWIRASRV*PPAPWGINRPWAHS
Trigger: GGAATGGGCCCATGGACGATTTATGCCCCAGGGGGCTGGAGGCCACACCCGGGAGGCTCGGATCCAGACACTGGAGCCTGACAACTGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515221.2
CDS-3UTR CAA 90 bp CCAGGGGGACACGCTTCCGGGTGCCATGGCCAAACAGCATCACCTCCTTCATCCTGTCATCTAGGGACGTaGCACCCCGCTGAGCCGCAG +
Preference number: 5 (lower is better)
Translates to: PGGHASGCHGQTASPPSSCHLGT*HPAEPQ
Trigger: CTGCGGCTCAGCGGGGTGCAACGTCCCTAGATGACA...GGATGAAGGAGGTGATGCTGTTTGGCCATGGCACCCGGAAGCGTGTCCCCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504284.1
CDS CCA 90 bp AAACTTCCTCCAGCCTCCTTCATCCAGTTGTCAGGCTCCAGTGTCTaGATCCGAGCCTCCCGGGTGTGGCCTCCAGCCCCCTGGGGCATA +
Preference number: 5 (lower is better)
Translates to: KLPPASFIQLSGSSV*IRASRVWPPAPWGI
Trigger: TATGCCCCAGGGGGCTGGAGGCCACACCCGGGAGGCTCGGATCCAGACACTGGAGCCTGACAACTGGATGAAGGAGGCTGGAGGAAGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506211.1
CDS CCA 90 bp CCAGTGAGCTCCAGCCTGCCCAGGGGGACACGCTTCCGGGTGCCATaGCCAAACAGCATCACCTCCTTCATCCAGTTGTCAGGCTCCAGT +
Preference number: 5 (lower is better)
Translates to: PVSSSLPRGTRFRVP*PNSITSFIQLSGSS
Trigger: ACTGGAGCCTGACAACTGGATGAAGGAGGTGATGCTGTTTGGCCATGGCACCCGGAAGCGTGTCCCCCTGGGCAGGCTGGAGCTCACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515221.2
CDS CCA 90 bp GCTCACAGCTCCAGCCTGCCCAGGGGGACACGCTTCCGGGTGCCATaGCCAAACAGCATCACCTCCTTCATCCAGTTGTCAGGCTCCAGT +
Preference number: 5 (lower is better)
Translates to: AHSSSLPRGTRFRVP*PNSITSFIQLSGSS
Trigger: ACTGGAGCCTGACAACTGGATGAAGGAGGTGATGCTGTTTGGCCATGGCACCCGGAAGCGTGTCCCCCTGGGCAGGCTGGAGCTGTGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509398.1
CDS-3UTR CAA 90 bp CGCAGAGCATCGCAGGCCGAGTGCGTCCGTCCCAACAGCCGGAGCTCAGTGTCAAGCTCCTGCACCTCCTaGTTCGCTCCAAACACATCC +
Preference number: 5 (lower is better)
Translates to: RRASQAECVRPNSRSSVSSSCTS*FAPNTS
Trigger: GGATGTGTTTGGAGCGAACAAGGAGGTGCAGGAGCT...TGACACTGAGCTCCGGCTGTTGGGACGGACGCACTCGGCCTGCGATGCTCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504284.1
CDS-3UTR CAA 90 bp GCAGCTCCTGCACCTCCTTGTTCGCTCCAAACACATCCCACAGGGTCAGCTGGGCTGCTGCCAGGCTTCTaGGAGCTGAGGCAGGAGGGT +
Preference number: 5 (lower is better)
Translates to: AAPAPPCSLQTHPTGSAGLLPGF*ELRQEG
Trigger: ACCCTCCTGCCTCAGCTCCAAGAAGCCTGGCAGCAG...CCCAGCTGACCCTGTGGGATGTGTTTGGAGCGAACAAGGAGGTGCAGGAGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506211.1
ENST00000515221.2
CDS GCA 90 bp AGGATTAGCCTCCAATGTGACTTCCAAGTCTGCAGGCAGGTGGGCTaGCTGTGCCACAGCCTCCAGGACAGCAGCCACCGTGTGGGGACT +
Preference number: 5 (lower is better)
Translates to: RISLQCDFQVCRQVG*LCHSLQDSSHRVGT
Trigger: AGTCCCCACACGGTGGCTGCTGTCCTGGAGGCTGTGGCACAGGCAGCCCACCTGCCTGCAGACTTGGAAGTCACATTGGAGGCTAATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258955.7
ENST00000443328.2
CDS GCA 90 bp TGGATGCTCACAGCTCCAGCCTGCCCAGGGGGACACGCTTCCGGGTaGCATGGCCAAACAGCATCACCTCCTTCATCCAGTTGTCAGGCT +
Preference number: 5 (lower is better)
Translates to: WMLTAPACPGGHASG*HGQTASPPSSSCQA
Trigger: AGCCTGACAACTGGATGAAGGAGGTGATGCTGTTTGGCCATGGCACCCGGAAGCGTGTCCCCCTGGGCAGGCTGGAGCTGTGAGCATCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509398.1
CDS-3UTR CAA 90 bp TGTCTGCAGTACCGACCCAGCTCTCAAAACCCACCTGGCATTACCCTGGAACACCACAGACTCCACCCGTaGCACCCCGCTGAGCCGCAG +
Preference number: 5 (lower is better)
Translates to: CLQYRPSSQNPPGITLEHHRLHP*HPAEPQ
Trigger: CTGCGGCTCAGCGGGGTGCAACGGGTGGAGTCTGTG...GTGTTCCAGGGTAATGCCAGGTGGGTTTTGAGAGCTGGGTCGGTACTGCAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR CAA 90 bp GGAGCTGAGGCAGGAGGGTCAGCAAGAGAGAGTCCAGCACAGCCAGACCCTCCCCCATTCCGGGCAAAGTaGGAGACCTCATACTGGTGG +
Preference number: 5 (lower is better)
Translates to: GAEAGGSARESPAQPDPPPFRAK*ETSYWW
Trigger: CCACCAGTATGAGGTCTCCAACTTTGCCCGGAATGG...GGGAGGGTCTGGCTGTGCTGGACTCTCTCTTGCTGACCCTCCTGCCTCAGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000504284.1
ENST00000506211.1
ENST00000515221.2
CDS TCA 90 bp GCCAATGGGCCAGCAGGGAGGAGGGCAGCTTCACTCCTATTCCACTaGGACTGGAACCCAGCTTCCAGCCAAGCCAGGCCTTCCTCTATG +
Preference number: 5 (lower is better)
Translates to: ANGPAGRRAASLLFH*DWNPASSQARPSSM
Trigger: CATAGAGGAAGGCCTGGCTTGGCTGGAAGCTGGGTTCCAGTCTCAGTGGAATAGGAGTGAAGCTGCCCTCCTCCCTGCTGGCCCATTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513650.1
CDS CCA 90 bp TCCTGCACCTCCTTGTTCGCTCCAAACACATCCCACAGGGTCAGCTaGGGCTCAAACTGCTGCCAGTGCTGGGGAAGCCAGAGGGTCAGA +
Preference number: 5 (lower is better)
Translates to: SCTSLFAPNTSHRVS*GSNCCQCWGSQRVR
Trigger: TCTGACCCTCTGGCTTCCCCAGCACTGGCAGCAGTTTGAGCCCCAGCTGACCCTGTGGGATGTGTTTGGAGCGAACAAGGAGGTGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513650.1
CDS CCA 90 bp CACCATCTCGGCCAGGATCCTTCTCTTCAGAAGGTCACAACGCCCTaGTCACACTGCAGTCTGCCCATCCTCCACCTCCAGCCATCAGCC +
Preference number: 5 (lower is better)
Translates to: HHLGQDPSLQKVTTP*SHCSLPILHLQPSA
Trigger: GGCTGATGGCTGGAGGTGGAGGATGGGCAGACTGCAGTGTGACCAGGGCGTTGTGACCTTCTGAAGAGAAGGATCCTGGCCGAGATGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509398.1
CDS-3UTR CAA 90 bp CCAGGGGGACACGCTTCCGGGTGCCATGGCCAAACAGCATCACCTCCTTCATCCCCATTCCGGGCAAAGTaGGAGACCTCATACTGGTGG +
Preference number: 5 (lower is better)
Translates to: PGGHASGCHGQTASPPSSPFRAK*ETSYWW
Trigger: CCACCAGTATGAGGTCTCCAACTTTGCCCGGAATGG...GGATGAAGGAGGTGATGCTGTTTGGCCATGGCACCCGGAAGCGTGTCCCCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504284.1
CDS CCA 90 bp TCCACCTCCAGCCATCAGCCCCAGAACTTACATTCCGGGCAAAGTTaGAGACCTCATACTGGTGGAAGCCAGCCTCCCGAAGGACAGCCC +
Preference number: 5 (lower is better)
Translates to: STSSHQPQNLHSGQS*RPHTGGSQPPEGQP
Trigger: GGGCTGTCCTTCGGGAGGCTGGCTTCCACCAGTATGAGGTCTCCAACTTTGCCCGGAATGTAAGTTCTGGGGCTGATGGCTGGAGGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509398.1
CDS-3UTR CAA 90 bp GAGCAGAGACGGCACCCGACAACGGAGAAGAGATGTCTGCAGTACCGACCCAGCCCATTCCGGGCAAAGTaGGAGACCTCATACTGGTGG +
Preference number: 5 (lower is better)
Translates to: EQRRHPTTEKRCLQYRPSPFRAK*ETSYWW
Trigger: CCACCAGTATGAGGTCTCCAACTTTGCCCGGAATGG...GCTGGGTCGGTACTGCAGACATCTCTTCTCCGTTGTCGGGTGCCGTCTCTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258955.7
ENST00000506211.1
CDS-3UTR CAA 90 bp TTGGAGCTGAGGCAGGAGGGTCAGCAAGAGAGAGTCCAGCACAGCCAGACCCTCAGCTCCTGCACCTCCTaGTTCGCTCCAAACACATCC +
Preference number: 5 (lower is better)
Translates to: LELRQEGQQERVQHSQTLSSCTS*FAPNTS
Trigger: GGATGTGTTTGGAGCGAACAAGGAGGTGCAGGAGCT...GAGGGTCTGGCTGTGCTGGACTCTCTCTTGCTGACCCTCCTGCCTCAGCTCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504284.1
ENST00000506211.1
ENST00000515221.2
CDS-3UTR CAA 90 bp CAGCTCCTGCACCTCCTTGTTCGCTCCAAACACATCCCACAGGGTCAGCTGGGGAGCTCCTGCACCTCCTaGTTCGCTCCAAACACATCC +
Preference number: 5 (lower is better)
Translates to: QLLHLLVRSKHIPQGQLGSSCTS*FAPNTS
Trigger: GGATGTGTTTGGAGCGAACAAGGAGGTGCAGGAGCT...CCCCAGCTGACCCTGTGGGATGTGTTTGGAGCGAACAAGGAGGTGCAGGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504284.1
ENST00000506211.1
ENST00000515221.2
CDS TCA 90 bp GTTAACCCCTGCTGCCCCGAACTCTGCCAGTCTGGAGCCCGGAGCTaGAGTAGGATTAGCCTCCAATGTGACTTCCAAGTCTGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: VNPCCPELCQSGARS*SRISLQCDFQVCRQ
Trigger: CTGCCTGCAGACTTGGAAGTCACATTGGAGGCTAATCCTACTTCAGCTCCGGGCTCCAGACTGGCAGAGTTCGGGGCAGCAGGGGTTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258955.7
ENST00000443328.2
CDS TCA 90 bp CGCCAAGGTACTGACCACACTGCCAGTAAGTCCAATTGTGGGTACTaGGCGCCCCCTGCGGGGAGGGAGGAAATAGTGCAGAGTGAAGAG +
Preference number: 5 (lower is better)
Translates to: RQGTDHTASKSNCGY*APPAGREEIVQSEE
Trigger: CTCTTCACTCTGCACTATTTCCTCCCTCCCCGCAGGGGGCGCTCAGTACCCACAATTGGACTTACTGGCAGTGTGGTCAGTACCTTGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509398.1
CDS-3UTR CAA 90 bp CACAAGGAGCAGAGACGGCACCCGACAACGGAGAAGAGATGTCTGCAGTACCGAAGCTCCTGCACCTCCTaGTTCGCTCCAAACACATCC +
Preference number: 5 (lower is better)
Translates to: HKEQRRHPTTEKRCLQYRSSCTS*FAPNTS
Trigger: GGATGTGTTTGGAGCGAACAAGGAGGTGCAGGAGCT...TCGGTACTGCAGACATCTCTTCTCCGTTGTCGGGTGCCGTCTCTGCTCCTTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258955.7
ENST00000506211.1
CDS-3UTR CAA 90 bp GAGGCAGGAGGGTCAGCAAGAGAGAGTCCAGCACAGCCAGACCCTCCCAGGAACAACACAGGAACATTTTaGTCATCCTCCTGGCACAGG +
Preference number: 5 (lower is better)
Translates to: EAGGSARESPAQPDPPRNNTGTF*SSSWHR
Trigger: CCTGTGCCAGGAGGATGACAAAAATGTTCCTGTGTT...GTTCCTGGGAGGGTCTGGCTGTGCTGGACTCTCTCTTGCTGACCCTCCTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506211.1
ENST00000515221.2
CDS-3UTR CAA 90 bp CTGAGACCATCAGCAGGAGTTTTCTGTGCCTCCTGCAAGTTGCTGATTTCTCACCTGCTGCCAGGCTTCTaGGAGCTGAGGCAGGAGGGT +
Preference number: 5 (lower is better)
Translates to: LRPSAGVFCASCKLLISHLLPGF*ELRQEG
Trigger: ACCCTCCTGCCTCAGCTCCAAGAAGCCTGGCAGCAG...GTGAGAAATCAGCAACTTGCAGGAGGCACAGAAAACTCCTGCTGATGGTCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR CAA 90 bp CTGAGCAATAACCACAAGGAGCAGAGACGGCACCCGACAACGGAGAAGAGATGTGCCTCCTTCATCCAGTaGTCAGGCTCCAGTGTCTGG +
Preference number: 5 (lower is better)
Translates to: LSNNHKEQRRHPTTEKRCASFIQ*SGSSVW
Trigger: CCAGACACTGGAGCCTGACAACTGGATGAAGGAGGC...ACATCTCTTCTCCGTTGTCGGGTGCCGTCTCTGCTCCTTGTGGTTATTGCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506211.1
CDS-3UTR CAA 90 bp AGAAGAGATGTCTGCAGTACCGACCCAGCTCTCAAAACCCACCTGGCATTACCCCCATTCCGGGCAAAGTaGGAGACCTCATACTGGTGG +
Preference number: 5 (lower is better)
Translates to: RRDVCSTDPALKTHLALPPFRAK*ETSYWW
Trigger: CCACCAGTATGAGGTCTCCAACTTTGCCCGGAATGG...GGGTAATGCCAGGTGGGTTTTGAGAGCTGGGTCGGTACTGCAGACATCTCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258955.7
ENST00000506211.1
CDS TCA 90 bp GCTCTTCCATGGCCTGTGTCGTTTCCCCCACACCCCCTCACCTGGTaGACTCTTCCTCTTCATTCAAACATCTCCTCCAGAGAAGTTTCA +
Preference number: 5 (lower is better)
Translates to: ALPWPVSFPPHPLTW*TLPLHSNISSREVS
Trigger: TGAAACTTCTCTGGAGGAGATGTTTGAATGAAGAGGAAGAGTTCACCAGGTGAGGGGGTGTGGGGGAAACGACACAGGCCATGGAAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000443328.2
CDS-3UTR CAA 90 bp AGACGGCACCCGACAACGGAGAAGAGATGTCTGCAGTACCGACCCAGCTCTCAAGCTGATTTCTCACAGTaGCTACTGGCTTTCTCCAAT +
Preference number: 5 (lower is better)
Translates to: RRHPTTEKRCLQYRPSSQADFSQ*LLAFSN
Trigger: ATTGGAGAAAGCCAGTAGCAACTGTGAGAAATCAGC...TTGAGAGCTGGGTCGGTACTGCAGACATCTCTTCTCCGTTGTCGGGTGCCGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR CAA 90 bp GAGCAGAGACGGCACCCGACAACGGAGAAGAGATGTCTGCAGTACCGACCCAGCAGAATTACAAACACTTaGGGTCTTTCCCGAATTCTC +
Preference number: 5 (lower is better)
Translates to: EQRRHPTTEKRCLQYRPSRITNT*GLSRIL
Trigger: GAGAATTCGGGAAAGACCCAAAGTGTTTGTAATTCT...GCTGGGTCGGTACTGCAGACATCTCTTCTCCGTTGTCGGGTGCCGTCTCTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS-3UTR CAA 90 bp ATGTCTGCAGTACCGACCCAGCTCTCAAAACCCACCTGGCATTACCCTGGAACAAACACAGGAACATTTTaGTCATCCTCCTGGCACAGG +
Preference number: 5 (lower is better)
Translates to: MSAVPTQLSKPTWHYPGTNTGTF*SSSWHR
Trigger: CCTGTGCCAGGAGGATGACAAAAATGTTCCTGTGTT...TGTTCCAGGGTAATGCCAGGTGGGTTTTGAGAGCTGGGTCGGTACTGCAGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258955.7
ENST00000506211.1
CDS-3UTR CAA 90 bp CTGAGCAATAACCACAAGGAGCAGAGACGGCACCCGACAACGGAGAAGAGATGTGTACATCATCTGCTTTaGTGCTGCTGGAAGCTGAGA +
Preference number: 5 (lower is better)
Translates to: LSNNHKEQRRHPTTEKRCVHHLL*CCWKLR
Trigger: TCTCAGCTTCCAGCAGCACAAAAGCAGATGATGTAC...ACATCTCTTCTCCGTTGTCGGGTGCCGTCTCTGCTCCTTGTGGTTATTGCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS CCA 90 bp AGCTCTAGCCAGGGCTTTATGGCTCTGCTTTATCCAGAGCAGCTCTaGATTTGCTTGATAATTATCTACTGTGCTTCCTATGAGAGGTTT +
Preference number: 5 (lower is better)
Translates to: SSSQGFMALLYPEQL*ICLIIIYCASYERF
Trigger: AAACCTCTCATAGGAAGCACAGTAGATAATTATCAAGCAAATCCAGAGCTGCTCTGGATAAAGCAGAGCCATAAAGCCCTGGCTAGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513650.1
CDS-3UTR CAA 90 bp GACATGGTTTTCCTGATTCATCCAGCTATCTTAGGACCTTACTCCAAAATAAGGAACACAGGAACATTTTaGTCATCCTCCTGGCACAGG +
Preference number: 5 (lower is better)
Translates to: DMVFLIHPAILGPYSKIRNTGTF*SSSWHR
Trigger: CCTGTGCCAGGAGGATGACAAAAATGTTCCTGTGTT...CCTTATTTTGGAGTAAGGTCCTAAGATAGCTGGATGAATCAGGAAAACCATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258955.7
CDS TCA 90 bp AGAGCAGCTCTGGATTTGCTTGATAATTATCTACTGTGCTTCCTATaGGAGGTTTCAGTGCTCCCTAAAAACAAGTGGAAACCCTTTATC +
Preference number: 5 (lower is better)
Translates to: RAALDLLDNYLLCFL*EVSVLPKNKWKPFI
Trigger: GATAAAGGGTTTCCACTTGTTTTTAGGGAGCACTGAAACCTCTCATAGGAAGCACAGTAGATAATTATCAAGCAAATCCAGAGCTGCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513650.1
CDS GCA 90 bp ATTTGCTTGATAATTATCTACTGTGCTTCCTATGAGAGGTTTCAGTaGTCCCTAAAAACAAGTGGAAACCCTTTATCTATCTATTGCTTC +
Preference number: 5 (lower is better)
Translates to: ICLIIIYCASYERFQ*SLKTSGNPLSIYCF
Trigger: GAAGCAATAGATAGATAAAGGGTTTCCACTTGTTTTTAGGGAGCACTGAAACCTCTCATAGGAAGCACAGTAGATAATTATCAAGCAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513650.1
CDS CCA 72 bp GGGGACCCTCCTGCGTTCTCCACGCGGCGGCGCCTCTaGGCCGCTCTGGCTGCTGCCGCCCAGCCGCGAGCC +
Preference number: 6 (lower is better)
Translates to: GDPPAFSTRRRL*AALAAAAQPRA
Trigger: GGCTCGCGGCTGGGCGGCAGCAGCCAGAGCGGCCCAGAGGCGCCGCCGCGTGGAGAACGCAGGAGGGTCCCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258955.7
ENST00000443328.2
ENST00000504284.1
ENST00000515221.2
CDS GCA 72 bp GCGCCGGCCCGCAGGCTCAGGACTCGGGGACCCTCCTaGGTTCTCCACGCGGCGGCGCCTCTGGGCCGCTCT +
Preference number: 6 (lower is better)
Translates to: APARRLRTRGPS*VLHAAAPLGRS
Trigger: AGAGCGGCCCAGAGGCGCCGCCGCGTGGAGAACGCAGGAGGGTCCCCGAGTCCTGAGCCTGCGGGCCGGCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258955.7
ENST00000443328.2
ENST00000504284.1
ENST00000515221.2
CDS GCA 72 bp GCCTCTGCCAGCGTCCGCAGAGCATCGCAGGCCGAGTaGGTCCGTCCCAACAGCCGGAGCTCAGTGTCATCT +
Preference number: 6 (lower is better)
Translates to: ASASVRRASQAE*VRPNSRSSVSS
Trigger: AGATGACACTGAGCTCCGGCTGTTGGGACGGACGCACTCGGCCTGCGATGCTCTGCGGACGCTGGCAGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258955.7
ENST00000504284.1
ENST00000515221.2
CDS CCA 72 bp CCAGCCTCCTTCATCCAGTTGTCAGGCTCCAGTGTCTaGATCCGAGCCTCCCGGGTGTGGCCTCCAGCCCCC +
Preference number: 6 (lower is better)
Translates to: PASFIQLSGSSV*IRASRVWPPAP
Trigger: GGGGGCTGGAGGCCACACCCGGGAGGCTCGGATCCAGACACTGGAGCCTGACAACTGGATGAAGGAGGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506211.1
CDS TCA 72 bp TCCACCCGTTGCACCCCGCTGAGCCGCAGCAGCGTCTaGGCTTCGGTCACCAGACACTTCTGCATGGCAGCC +
Preference number: 6 (lower is better)
Translates to: STRCTPLSRSSV*ASVTRHFCMAA
Trigger: GGCTGCCATGCAGAAGTGTCTGGTGACCGAAGCTCAGACGCTGCTGCGGCTCAGCGGGGTGCAACGGGTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258955.7
ENST00000443328.2
ENST00000510554.1
CDS TCA 72 bp CGGAGCTCAGTGTCATCTAGGGACGTTGCACCCCGCTaGGCCGCAGCAGCGTCTGAGCTTCGGTCACCAGAC +
Preference number: 6 (lower is better)
Translates to: RSSVSSRDVAPR*AAAASELRSPD
Trigger: GTCTGGTGACCGAAGCTCAGACGCTGCTGCGGCTCAGCGGGGTGCAACGTCCCTAGATGACACTGAGCTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504284.1
CDS TCA 72 bp CGGGGGCACGGAAACACGGCAGGCGGGTTCATAGAGTaGCAAACCGCCACCTGGGTTTTGGACGGCCACGGT +
Preference number: 6 (lower is better)
Translates to: RGHGNTAGGFIE*QTATWVLDGHG
Trigger: ACCGTGGCCGTCCAAAACCCAGGTGGCGGTTTGTCACTCTATGAACCCGCCTGCCGTGTTTCCGTGCCCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510554.1
CDS CCA 72 bp ATGGGCCCATTCCGGGCAAAGTTGGAGACCTCATACTaGTGGAAGCCAGCCTCCCGAAGGACAGCCCGGCCC +
Preference number: 6 (lower is better)
Translates to: MGPFRAKLETSY*WKPASRRTARP
Trigger: GGGCCGGGCTGTCCTTCGGGAGGCTGGCTTCCACCAGTATGAGGTCTCCAACTTTGCCCGGAATGGGCCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515221.2
CDS TCA 72 bp CACCAAAGAACACAGACTCCACCCGTTGCACCCCGCTaGGCCGCAGCAGCGTCTGAGCTTCGGTCACCAGAC +
Preference number: 6 (lower is better)
Translates to: HQRTQTPPVAPR*AAAASELRSPD
Trigger: GTCTGGTGACCGAAGCTCAGACGCTGCTGCGGCTCAGCGGGGTGCAACGGGTGGAGTCTGTGTTCTTTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258955.7
ENST00000443328.2
ENST00000510554.1
CDS GCA 72 bp ACAGCTCCAGCCTGCCCAGGGGGACACGCTTCCGGGTaGCATGGCCAAACAGCATCACCTCCTTCATCCAGT +
Preference number: 6 (lower is better)
Translates to: TAPACPGGHASG*HGQTASPPSSS
Trigger: ACTGGATGAAGGAGGTGATGCTGTTTGGCCATGGCACCCGGAAGCGTGTCCCCCTGGGCAGGCTGGAGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509398.1
CDS CCA 72 bp ACCAAAGAGGAGATGGCACTGAAGGGCGGGGTGCACTaGGATGGGGTGAGTGCCATGGGTTACCTGGAGGCC +
Preference number: 6 (lower is better)
Translates to: TKEEMALKGGVH*DGVSAMGYLEA
Trigger: GGCCTCCAGGTAACCCATGGCACTCACCCCATCCCAGTGCACCCCGCCCTTCAGTGCCATCTCCTCTTTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443328.2
CDS GCA 72 bp GGTTACCTGGAGGCCTATAGACAACCTGTTAACCCCTaGTGCCCCGAACTCTGCCAGTCTGGAGCCCGGAGC +
Preference number: 6 (lower is better)
Translates to: GYLEAYRQPVNP*CPELCQSGARS
Trigger: GCTCCGGGCTCCAGACTGGCAGAGTTCGGGGCAGCAGGGGTTAACAGGTTGTCTATAGGCCTCCAGGTAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443328.2
CDS CCA 72 bp TCCTTGTTCGCTCCAAACACATCCCACAGGGTCAGCTaGGGCTCAAACTGCTGCCAGTGCTGGGGAAGCCAG +
Preference number: 6 (lower is better)
Translates to: SLFAPNTSHRVS*GSNCCQCWGSQ
Trigger: CTGGCTTCCCCAGCACTGGCAGCAGTTTGAGCCCCAGCTGACCCTGTGGGATGTGTTTGGAGCGAACAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513650.1
CDS CCA 72 bp GAACTTACATTCCGGGCAAAGTTGGAGACCTCATACTaGTGGAAGCCAGCCTCCCGAAGGACAGCCCGGCCC +
Preference number: 6 (lower is better)
Translates to: ELTFRAKLETSY*WKPASRRTARP
Trigger: GGGCCGGGCTGTCCTTCGGGAGGCTGGCTTCCACCAGTATGAGGTCTCCAACTTTGCCCGGAATGTAAGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509398.1
CDS CCA 72 bp GGCCAGGATCCTTCTCTTCAGAAGGTCACAACGCCCTaGTCACACTGCAGTCTGCCCATCCTCCACCTCCAG +
Preference number: 6 (lower is better)
Translates to: GQDPSLQKVTTP*SHCSLPILHLQ
Trigger: CTGGAGGTGGAGGATGGGCAGACTGCAGTGTGACCAGGGCGTTGTGACCTTCTGAAGAGAAGGATCCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509398.1
CDS CAA 90 bp CTCCACCTCCAGCCATCAGCCCCAGAACTTACATTCCGGGCAAAGTaGGAGACCTCATACTGGTGGAAGCCAGCCTCCCGAAGGACAGCC +
Preference number: 6 (lower is better)
Translates to: LHLQPSAPELTFRAK*ETSYWWKPASRRTA
Trigger: GGCTGTCCTTCGGGAGGCTGGCTTCCACCAGTATGAGGTCTCCAACTTTGCCCGGAATGTAAGTTCTGGGGCTGATGGCTGGAGGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509398.1
CDS TCA 72 bp ACTGACCACACTGCCAGTAAGTCCAATTGTGGGTACTaGGCGCCCCCTGCGGGGAGGGAGGAAATAGTGCAG +
Preference number: 6 (lower is better)
Translates to: TDHTASKSNCGY*APPAGREEIVQ
Trigger: CTGCACTATTTCCTCCCTCCCCGCAGGGGGCGCTCAGTACCCACAATTGGACTTACTGGCAGTGTGGTCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509398.1
CDS CAA 72 bp GGGCATAAATCGTCCATGGGCCCATTCCGGGCAAAGTaGGAGACCTCATACTGGTGGAAGCCAGCCTCCCGA +
Preference number: 6 (lower is better)
Translates to: GHKSSMGPFRAK*ETSYWWKPASR
Trigger: TCGGGAGGCTGGCTTCCACCAGTATGAGGTCTCCAACTTTGCCCGGAATGGGCCCATGGACGATTTATGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515221.2
CDS TCA 72 bp TGCTGCCCCGAACTCTGCCAGTCTGGAGCCCGGAGCTaGAGTAGGATTAGCCTCCAATGTGACTTCCAAGTC +
Preference number: 6 (lower is better)
Translates to: CCPELCQSGARS*SRISLQCDFQV
Trigger: GACTTGGAAGTCACATTGGAGGCTAATCCTACTTCAGCTCCGGGCTCCAGACTGGCAGAGTTCGGGGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258955.7
ENST00000443328.2
CDS CCA 72 bp GGCATAAATCGTCCATGGGCCCATTCCGGGCAAAGTTaGAGACCTCATACTGGTGGAAGCCAGCCTCCCGAA +
Preference number: 6 (lower is better)
Translates to: GINRPWAHSGQS*RPHTGGSQPPE
Trigger: TTCGGGAGGCTGGCTTCCACCAGTATGAGGTCTCCAACTTTGCCCGGAATGGGCCCATGGACGATTTATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515221.2
CDS CAA 72 bp CAGCCATCAGCCCCAGAACTTACATTCCGGGCAAAGTaGGAGACCTCATACTGGTGGAAGCCAGCCTCCCGA +
Preference number: 6 (lower is better)
Translates to: QPSAPELTFRAK*ETSYWWKPASR
Trigger: TCGGGAGGCTGGCTTCCACCAGTATGAGGTCTCCAACTTTGCCCGGAATGTAAGTTCTGGGGCTGATGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509398.1
CDS GCA 72 bp GCAGAGACTTCAGGTTTCTGGACCAAGTCATTTCCCTaGCAAAGCACAGGGTCCCATCCCAGACCTCGTACG +
Preference number: 6 (lower is better)
Translates to: AETSGFWTKSFP*QSTGSHPRPRT
Trigger: CGTACGAGGTCTGGGATGGGACCCTGTGCTTTGGCAGGGAAATGACTTGGTCCAGAAACCTGAAGTCTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510554.1
CDS CCA 72 bp AGCCATCAGCCCCAGAACTTACATTCCGGGCAAAGTTaGAGACCTCATACTGGTGGAAGCCAGCCTCCCGAA +
Preference number: 6 (lower is better)
Translates to: SHQPQNLHSGQS*RPHTGGSQPPE
Trigger: TTCGGGAGGCTGGCTTCCACCAGTATGAGGTCTCCAACTTTGCCCGGAATGTAAGTTCTGGGGCTGATGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509398.1
CDS CAA 90 bp CAGGGCTTTATGGCTCTGCTTTATCCAGAGCAGCTCTGGATTTGCTaGATAATTATCTACTGTGCTTCCTATGAGAGGTTTCAGTGCTCC +
Preference number: 6 (lower is better)
Translates to: QGFMALLYPEQLWIC*IIIYCASYERFQCS
Trigger: GGAGCACTGAAACCTCTCATAGGAAGCACAGTAGATAATTATCAAGCAAATCCAGAGCTGCTCTGGATAAAGCAGAGCCATAAAGCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513650.1
CDS TCA 72 bp ATCTCCTCCAGAGAAGTTTCAGTGATTTCATCAGAGTaGCCTCCCTTCAGGCTGTACTCTAGAAGCCTTTTA +
Preference number: 6 (lower is better)
Translates to: ISSREVSVISSE*PPFRLYSRSLL
Trigger: TAAAAGGCTTCTAGAGTACAGCCTGAAGGGAGGTCACTCTGATGAAATCACTGAAACTTCTCTGGAGGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443328.2
CDS TCA 72 bp CTGGATTTGCTTGATAATTATCTACTGTGCTTCCTATaGGAGGTTTCAGTGCTCCCTAAAAACAAGTGGAAA +
Preference number: 6 (lower is better)
Translates to: LDLLDNYLLCFL*EVSVLPKNKWK
Trigger: TTTCCACTTGTTTTTAGGGAGCACTGAAACCTCTCATAGGAAGCACAGTAGATAATTATCAAGCAAATCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513650.1
CDS GCA 72 bp ATAATTATCTACTGTGCTTCCTATGAGAGGTTTCAGTaGTCCCTAAAAACAAGTGGAAACCCTTTATCTATC +
Preference number: 6 (lower is better)
Translates to: IIIYCASYERFQ*SLKTSGNPLSI
Trigger: GATAGATAAAGGGTTTCCACTTGTTTTTAGGGAGCACTGAAACCTCTCATAGGAAGCACAGTAGATAATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513650.1