RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RRM1 (Homo sapiens)

Ensembl gene IDs: ENSG00000167325

Ensembl transcript IDs: ENST00000300738.10, ENST00000526304.5, ENST00000526350.5, ENST00000526865.5, ENST00000528442.5, ENST00000528470.5, ENST00000530368.1, ENST00000532170.5, ENST00000532710.5, ENST00000533349.5, ENST00000533495.5, ENST00000534285.5

Found 571 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGAAGAATTCCTTTGCTAACTGGAGAGCCCTCATAGGTTTCGTATaGGCCCTGCTCCTTGGCAAGGTCACAGCTGGCTTCCAGAGCACC +
Preference number: 1 (lower is better)
Translates to: LKNSFANWRALIGFV*ALLLGKVTAGFQST
Trigger: GGTGCTCTGGAAGCCAGCTGTGACCTTGCCAAGGAGCAGGGCCCATACGAAACCTATGAGGGCTCTCCAGTTAGCAAAGGAATTCTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR TCA 90 bp CTTTGTAGAGCATATACGGGGTGCCTGTTTCCGTCTGAGACTCAATaGTGGCATACCAAAGCTGCTGAGCTTTTACAACTTTGCGGACAC +
Preference number: 1 (lower is better)
Translates to: LCRAYTGCLFPSETQ*WHTKAAELLQLCGH
Trigger: GTGTCCGCAAAGTTGTAAAAGCTCAGCAGCTTTGGTATGCCATCATTGAGTCTCAGACGGAAACAGGCACCCCGTATATGCTCTACAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR TCA 90 bp CTTTGCTGGTGTACTCCACTATTTCTGTGCACAGGTTGCTGCATTTaGTGGTTCCCAGGTTCTGCTGGTTGCTCTTTCGATTACAGGAAT +
Preference number: 1 (lower is better)
Translates to: LCWCTPLFLCTGCCI*WFPGSAGCSFDYRN
Trigger: ATTCCTGTAATCGAAAGAGCAACCAGCAGAACCTGGGAACCATCAAATGCAGCAACCTGTGCACAGAAATAGTGGAGTACACCAGCAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR CCA 90 bp ACCTCAAGCAAACCCACTATACCTATCTATGCTCAAGAAGTAGTTTaGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTTCCTCAGGA +
Preference number: 1 (lower is better)
Translates to: TSSKPTIPIYAQEVV*LLKTCWSLPSLSSG
Trigger: TCCTGAGGAAAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATAGGTATAGTGGGTTTGCTTGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR GCA 90 bp ACTATACCTATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATaGTGGTCTCTTCCAAGTCTTTCCTCAGGATCCACACATCAGACA +
Preference number: 1 (lower is better)
Translates to: TIPIYAQEVVWLLKT*WSLPSLSSGSTHQT
Trigger: TGTCTGATGTGTGGATCCTGAGGAAAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATAGGTATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR CCA 90 bp ATACCTATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTaGTCTCTTCCAAGTCTTTCCTCAGGATCCACACATCAGACATTC +
Preference number: 1 (lower is better)
Translates to: IPIYAQEVVWLLKTC*SLPSLSSGSTHQTF
Trigger: GAATGTCTGATGTGTGGATCCTGAGGAAAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATAGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR TCA 90 bp AGCAGAATTCAGGCGATCTTTATTGGCCAGAACAATATCCAATGTTaGCTTGGCCACCATGGGAGAGTGTTTGCCATTATGTGGATTTAT +
Preference number: 1 (lower is better)
Translates to: SRIQAIFIGQNNIQC*LGHHGRVFAIMWIY
Trigger: ATAAATCCACATAATGGCAAACACTCTCCCATGGTGGCCAAGTCAACATTGGATATTGTTCTGGCCAATAAAGATCGCCTGAATTCTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
3UTR TCA 90 bp GACTTTAGTGACTTCAGCCAACTTCTTAAAGTCGTATGTGTGTTCTaGTGTGACATACATATTCAGGGCCAGGGAAGCCAAATTACAAAC +
Preference number: 1 (lower is better)
Translates to: DFSDFSQLLKVVCVF*CDIHIQGQGSQITN
Trigger: GTTTGTAATTTGGCTTCCCTGGCCCTGAATATGTATGTCACATCAGAACACACATACGACTTTAAGAAGTTGGCTGAAGTCACTAAAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR GCA 90 bp CCAGAACAATATCCAATGTTGACTTGGCCACCATGGGAGAGTGTTTaGCATTATGTGGATTTATGTAGTTATAGAGGTCTTCCATCACAT +
Preference number: 1 (lower is better)
Translates to: PEQYPMLTWPPWESV*HYVDLCSYRGLPSH
Trigger: ATGTGATGGAAGACCTCTATAACTACATAAATCCACATAATGGCAAACACTCTCCCATGGTGGCCAAGTCAACATTGGATATTGTTCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532170.5
3UTR CCA 90 bp AATTCAGGCGATCTTTATTGGCCAGAACAATATCCAATGTTGACTTaGCCACCATGGGAGAGTGTTTGCCATTATGTGGATTTATGTAGT +
Preference number: 1 (lower is better)
Translates to: NSGDLYWPEQYPMLT*PPWESVCHYVDLCS
Trigger: ACTACATAAATCCACATAATGGCAAACACTCTCCCATGGTGGCCAAGTCAACATTGGATATTGTTCTGGCCAATAAAGATCGCCTGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
3UTR CCA 90 bp GATCTTTATTGGCCAGAACAATATCCAATGTTGACTTGGCCACCATaGGAGAGTGTTTGCCATTATGTGGATTTATGTAGTTATAGAGGT +
Preference number: 1 (lower is better)
Translates to: DLYWPEQYPMLTWPP*ESVCHYVDLCSYRG
Trigger: ACCTCTATAACTACATAAATCCACATAATGGCAAACACTCTCCCATGGTGGCCAAGTCAACATTGGATATTGTTCTGGCCAATAAAGATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
3UTR-3UTR GCA 90 bp CTGGAGAGCCCTCATAGGTTTCGTATGGGCCCTGCTCCTTGGCAAGGTCACAGCCAGGATAAAAGCATCTaGCAGACCTTGTACCCCAAT +
Preference number: 2 (lower is better)
Translates to: LESPHRFRMGPAPWQGHSQDKSI*QTLYPN
Trigger: ATTGGGGTACAAGGTCTGGCAGATGCTTTTATCCTG...GCTGTGACCTTGCCAAGGAGCAGGGCCCATACGAAACCTATGAGGGCTCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR TCA 90 bp GCCATTAGTCCCAGCAATGTAGCTGCCAGTAGCCCGAATACAACTCACAGCAACGTGCCTGTTTCCGTCTaGGACTCAATGATGGCATAC +
Preference number: 2 (lower is better)
Translates to: AISPSNVAASSPNTTHSNVPVSV*DSMMAY
Trigger: GTATGCCATCATTGAGTCTCAGACGGAAACAGGCAC...GTTGCTGTGAGTTGTATTCGGGCTACTGGCAGCTACATTGCTGGGACTAATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
3UTR-3UTR TCA 90 bp TGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACCTATCTTATTCCCCAGGATCTaGGCAGTGGAAGCTGTAGGC +
Preference number: 2 (lower is better)
Translates to: CNRVQQSLTTSSKPTIPILFPRI*AVEAVG
Trigger: GCCTACAGCTTCCACTGCTCAGATCCTGGGGAATAA...GATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR TCA 90 bp GCCAGACCTTGTACCCCAATTCCAATGGGGCGATGGCGTTTATTTGATAGGCATGGTTGGTACCAGCATTaGAGAGAGTGGGCGAAGCAT +
Preference number: 2 (lower is better)
Translates to: ARPCTPIPMGRWRLFDRHGWYQH*REWAKH
Trigger: ATGCTTCGCCCACTCTCTTCAATGCTGGTACCAACC...ATGCCTATCAAATAAACGCCATCGCCCCATTGGAATTGGGGTACAAGGTCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
3UTR-3UTR GCA 90 bp GCCATTAGTCCCAGCAATGTAGCTGCCAGTAGCCCGAATACAACTCACAGCAACAGAGCATATACGGGGTaGCTGTTTCCGTCTGAGACT +
Preference number: 2 (lower is better)
Translates to: AISPSNVAASSPNTTHSNRAYTG*LFPSET
Trigger: AGTCTCAGACGGAAACAGGCACCCCGTATATGCTCT...GTTGCTGTGAGTTGTATTCGGGCTACTGGCAGCTACATTGCTGGGACTAATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
3UTR-3UTR TCA 90 bp AGCCCTCATAGGTTTCGTATGGGCCCTGCTCCTTGGCAAGGTCACAGCTGGCTTGTCGTATGTGTGTTCTaGTGTGACATACATATTCAG +
Preference number: 2 (lower is better)
Translates to: SPHRFRMGPAPWQGHSWLVVCVF*CDIHIQ
Trigger: CTGAATATGTATGTCACATCAGAACACACATACGAC...AAGCCAGCTGTGACCTTGCCAAGGAGCAGGGCCCATACGAAACCTATGAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR TCA 90 bp TGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACCTATCGCATACCAAAGCTGCTaGGCTTTTACAACTTTGCGG +
Preference number: 2 (lower is better)
Translates to: CNRVQQSLTTSSKPTIPIAYQSC*AFTTLR
Trigger: CCGCAAAGTTGTAAAAGCTCAGCAGCTTTGGTATGC...GATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR TCA 90 bp AGACATGCTGGTCTCTTCCAAGTCTTTCCTCAGGATCCACACATCAGACATTCATTATTCCCCAGGATCTaGGCAGTGGAAGCTGTAGGC +
Preference number: 2 (lower is better)
Translates to: RHAGLFQVFPQDPHIRHSLFPRI*AVEAVG
Trigger: GCCTACAGCTTCCACTGCTCAGATCCTGGGGAATAA...TGAATGTCTGATGTGTGGATCCTGAGGAAAGACTTGGAAGAGACCAGCATGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR TCA 90 bp GGTGCCTGTTTCCGTCTGAGACTCAATGATGGCATACCAAAGCTGCTGAGCTTTTCTCCACTCGTTTCATaGAGAGATCCGGAATCCAAA +
Preference number: 2 (lower is better)
Translates to: GACFRLRLNDGIPKLLSFSPLVS*RDPESK
Trigger: TTTGGATTCCGGATCTCTTCATGAAACGAGTGGAGA...AAAGCTCAGCAGCTTTGGTATGCCATCATTGAGTCTCAGACGGAAACAGGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR TCA 90 bp AAACAGCAACCTCATCTTTGCTGGTGTACTCCACTATTTCTGTGCACAGGTTGCACAGGTTGCTGCATTTaGTGGTTCCCAGGTTCTGCT +
Preference number: 2 (lower is better)
Translates to: KQQPHLCWCTPLFLCTGCTGCCI*WFPGSA
Trigger: AGCAGAACCTGGGAACCATCAAATGCAGCAACCTGT...GCAACCTGTGCACAGAAATAGTGGAGTACACCAGCAAAGATGAGGTTGCTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR GCA 90 bp TTTGTAGAGCATATACGGGGTGCCTGTTTCCGTCTGAGACTCAATGATGGCATAAGATCTCTGGCACGCTaGTCTTCCTTTCCTGTGTTC +
Preference number: 2 (lower is better)
Translates to: FVEHIRGACFRLRLNDGIRSLAR*SSFPVF
Trigger: GAACACAGGAAAGGAAGAGCAGCGTGCCAGAGATCT...TATGCCATCATTGAGTCTCAGACGGAAACAGGCACCCCGTATATGCTCTACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR CCA 90 bp GGTGCCTGTTTCCGTCTGAGACTCAATGATGGCATACCAAAGCTGCTGAGCTTTGCTCAAGAAGTAGTTTaGCTACTGAAGACATGCTGG +
Preference number: 2 (lower is better)
Translates to: GACFRLRLNDGIPKLLSFAQEVV*LLKTCW
Trigger: CCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGC...AAAGCTCAGCAGCTTTGGTATGCCATCATTGAGTCTCAGACGGAAACAGGCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR CCA 90 bp TCCTTGAGAACCTTCCAGTCCCATAGGTCTGTAGGAGTAACATTCCACATATCACTCATAGGTTTCGTATaGGCCCTGCTCCTTGGCAAG +
Preference number: 2 (lower is better)
Translates to: SLRTFQSHRSVGVTFHISLIGFV*ALLLGK
Trigger: CTTGCCAAGGAGCAGGGCCCATACGAAACCTATGAG...TGATATGTGGAATGTTACTCCTACAGACCTATGGGACTGGAAGGTTCTCAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR CCA 90 bp CCCAGTCTTCAAACCCTGCTTCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCAATTCCTTTGCTAACTaGAGAGCCCTCATAGGTTTC +
Preference number: 2 (lower is better)
Translates to: PSLQTLLPAVEVHTSEFANSFAN*RALIGF
Trigger: GAAACCTATGAGGGCTCTCCAGTTAGCAAAGGAATT...GGCAAACTCACTAGTATGCACTTCTACGGCTGGAAGCAGGGTTTGAAGACTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR CAA 90 bp TCTTTGCTGGTGTACTCCACTATTTCTGTGCACAGGTTGCTGCATTaGATGGTTCCCAGGTTCTGCTGGTTGCTCTTTCGATTACAGGAA +
Preference number: 2 (lower is better)
Translates to: SLLVYSTISVHRLLH*MVPRFCWLLFRLQE
Trigger: TTCCTGTAATCGAAAGAGCAACCAGCAGAACCTGGGAACCATCAAATGCAGCAACCTGTGCACAGAAATAGTGGAGTACACCAGCAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR TCA 90 bp CCCAGTCTTCAAACCCTGCTTCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCTTGAGAACAGTTTTCTaGGAGATTTCCCACACAGTT +
Preference number: 2 (lower is better)
Translates to: PSLQTLLPAVEVHTSEFALRTVF*EISHTV
Trigger: AACTGTGTGGGAAATCTCTCAGAAAACTGTTCTCAA...GGCAAACTCACTAGTATGCACTTCTACGGCTGGAAGCAGGGTTTGAAGACTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR TCA 90 bp AGTCTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAAAGATCCTAGTTCCACTGTGGTaGCCCCACTGTACAAGCCTT +
Preference number: 2 (lower is better)
Translates to: SLHSFHEEIRNPKSKEKILVPLW*PHCTSL
Trigger: AAGGCTTGTACAGTGGGGTCACCACAGTGGAACTAG...GATCTTTTCTTTGCTCTTTGGATTCCGGATCTCTTCATGAAACGAGTGGAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532170.5
3UTR-3UTR TCA 90 bp CTTCAGGTCATCAGGAATTTCTGGTATGCTCTGAATAGAGCCATTGCATGCAATGGTTGGTACCAGCATTaGAGAGAGTGGGCGAAGCAT +
Preference number: 2 (lower is better)
Translates to: LQVIRNFWYALNRAIACNGWYQH*REWAKH
Trigger: ATGCTTCGCCCACTCTCTTCAATGCTGGTACCAACC...ATTGCATGCAATGGCTCTATTCAGAGCATACCAGAAATTCCTGATGACCTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
3UTR-3UTR CCA 90 bp ACACATCAAAGACCAGTCCTGATTAGTCTCCACTCGTTTCATGAAGAGATCCGGGTTCCCAGGTTCTGCTaGTTGCTCTTTCGATTACAG +
Preference number: 2 (lower is better)
Translates to: THQRPVLISLHSFHEEIRVPRFC*LLFRLQ
Trigger: CTGTAATCGAAAGAGCAACCAGCAGAACCTGGGAAC...CCGGATCTCTTCATGAAACGAGTGGAGACTAATCAGGACTGGTCTTTGATGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR CCA 90 bp ACATGCTGGTCTCTTCCAAGTCTTTCCTCAGGATCCACACATCAGACATTCATCGTACCCCAATTCCAATaGGGCGATGGCGTTTATTTG +
Preference number: 2 (lower is better)
Translates to: TCWSLPSLSSGSTHQTFIVPQFQ*GDGVYL
Trigger: CAAATAAACGCCATCGCCCCATTGGAATTGGGGTAC...GATGAATGTCTGATGTGTGGATCCTGAGGAAAGACTTGGAAGAGACCAGCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR CCA 90 bp ATCTTCTCCTTGAGAACCTTCCAGTCCCATAGGTCTGTAGGAGTAACATTCCACACAGCTAGAAAGTTGTaGGCGGTTGGTACCAGCATT +
Preference number: 2 (lower is better)
Translates to: IFSLRTFQSHRSVGVTFHTARKL*AVGTSI
Trigger: AATGCTGGTACCAACCGCCCACAACTTTCTAGCTGT...GTGGAATGTTACTCCTACAGACCTATGGGACTGGAAGGTTCTCAAGGAGAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
3UTR CAA 90 bp CACCTCAAGCAAACCCACTATACCTATCTATGCTCAAGAAGTAGTTaGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTTCCTCAGG +
Preference number: 2 (lower is better)
Translates to: HLKQTHYTYLCSRSS*ATEDMLVSSKSFLR
Trigger: CCTGAGGAAAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATAGGTATAGTGGGTTTGCTTGAGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR TCA 90 bp CTTTCGATTACAGGAATCTTTGTAGAGCATATACGGGGTGCCTGTTTCCGTCTGATCAAAGACCAGTCCTaGTTAGTCTCCACTCGTTTC +
Preference number: 2 (lower is better)
Translates to: LSITGIFVEHIRGACFRLIKDQS*LVSTRF
Trigger: GAAACGAGTGGAGACTAATCAGGACTGGTCTTTGAT...CAGACGGAAACAGGCACCCCGTATATGCTCTACAAAGATTCCTGTAATCGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR TCA 90 bp CAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACCTATCTATGCTCAAGAAGCATACCAAAGCTGCTaGGCTTTTACAACTTTGCGG +
Preference number: 2 (lower is better)
Translates to: QQSLTTSSKPTIPIYAQEAYQSC*AFTTLR
Trigger: CCGCAAAGTTGTAAAAGCTCAGCAGCTTTGGTATGC...TTCTTGAGCATAGATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR TCA 90 bp CTTCAGGTCATCAGGAATTTCTGGTATGCTCTGAATAGAGCCATTGCATGCAATCCGTCTGAGACTCAATaGTGGCATACCAAAGCTGCT +
Preference number: 2 (lower is better)
Translates to: LQVIRNFWYALNRAIACNPSETQ*WHTKAA
Trigger: AGCAGCTTTGGTATGCCATCATTGAGTCTCAGACGG...ATTGCATGCAATGGCTCTATTCAGAGCATACCAGAAATTCCTGATGACCTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR TCA 90 bp CTGATTAGTCTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAACAGGTTGCTGCATTTaGTGGTTCCCAGGTTCTGCT +
Preference number: 2 (lower is better)
Translates to: LISLHSFHEEIRNPKSKETGCCI*WFPGSA
Trigger: AGCAGAACCTGGGAACCATCAAATGCAGCAACCTGT...TTCTTTGCTCTTTGGATTCCGGATCTCTTCATGAAACGAGTGGAGACTAATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR GCA 90 bp GTGACATACATATTCAGGGCCAGGGAAGCCAAATTACAAACAGCAACCTCATCTATTACTCCTTTTGCCTaGAACAGGGTCCAGCAAAGC +
Preference number: 2 (lower is better)
Translates to: VTYIFRAREAKLQTATSSITPFA*NRVQQS
Trigger: GCTTTGCTGGACCCTGTTGCAGGCAAAAGGAGTAAT...AGATGAGGTTGCTGTTTGTAATTTGGCTTCCCTGGCCCTGAATATGTATGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR GCA 90 bp GTTTCGGACAACGACTTTAGTGACTTCAGCCAACTTCTTAAAGTCGTATGTGTGAGATCTCTGGCACGCTaGTCTTCCTTTCCTGTGTTC +
Preference number: 2 (lower is better)
Translates to: VSDNDFSDFSQLLKVVCVRSLAR*SSFPVF
Trigger: GAACACAGGAAAGGAAGAGCAGCGTGCCAGAGATCT...CACACATACGACTTTAAGAAGTTGGCTGAAGTCACTAAAGTCGTTGTCCGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR GCA 90 bp TTGCTGGTGTACTCCACTATTTCTGTGCACAGGTTGCTGCATTTGATGGTTCCCGAGCTTTTACAACTTTaGGGACACGACCTTGTTTCT +
Preference number: 2 (lower is better)
Translates to: LLVYSTISVHRLLHLMVPELLQL*GHDLVS
Trigger: AGAAACAAGGTCGTGTCCGCAAAGTTGTAAAAGCTC...GGGAACCATCAAATGCAGCAACCTGTGCACAGAAATAGTGGAGTACACCAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR CCA 90 bp ACTGAAGACATGCTGGTCTCTTCCAAGTCTTTCCTCAGGATCCACACATCAGACCAACCTCATCTTTGCTaGTGTACTCCACTATTTCTG +
Preference number: 2 (lower is better)
Translates to: TEDMLVSSKSFLRIHTSDQPHLC*CTPLFL
Trigger: CAGAAATAGTGGAGTACACCAGCAAAGATGAGGTTG...GTCTGATGTGTGGATCCTGAGGAAAGACTTGGAAGAGACCAGCATGTCTTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR CAA 90 bp AGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATGTTCAAAGATaGGCTTTGATCAATGAAAGCACCTCTCTCAGCTGCCATCTTGAG +
Preference number: 2 (lower is better)
Translates to: SEFAIVRLSNVDVQR*ALINESTSLSCHLE
Trigger: CTCAAGATGGCAGCTGAGAGAGGTGCTTTCATTGATCAAAGCCAATCTTTGAACATCCACATTGCTGAGCCTAACTATGGCAAACTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR TCA 90 bp CCTATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCATCTCCACTCGTTTCATaGAGAGATCCGGAATCCAAA +
Preference number: 2 (lower is better)
Translates to: PIYAQEVVWLLKTCWSLPSPLVS*RDPESK
Trigger: TTTGGATTCCGGATCTCTTCATGAAACGAGTGGAGA...TGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR GCA 90 bp CTTCTCATGAGTTATCACTCAGTTTTGCTTCTAGAGACCCACCAGTCAAAGCAGATCAATTACTCCTTTTaGCTGCAACAGGGTCCAGCA +
Preference number: 2 (lower is better)
Translates to: LLMSYHSVLLLETHQSKQINYSF*LQQGPA
Trigger: TGCTGGACCCTGTTGCAGGCAAAAGGAGTAATTGAT...CTGCTTTGACTGGTGGGTCTCTAGAAGCAAAACTGAGTGATAACTCATGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR GCA 90 bp CCCAGTCTTCAAACCCTGCTTCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTTCAAAGATCTaGTTATTCAGTAACTGGGCT +
Preference number: 2 (lower is better)
Translates to: PSLQTLLPAVEVHTSEFAIVSKI*LFSNWA
Trigger: AGCCCAGTTACTGAATAAGCAGATCTTTGAAACTAT...GGCAAACTCACTAGTATGCACTTCTACGGCTGGAAGCAGGGTTTGAAGACTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR CCA 90 bp ACATGCTGGTCTCTTCCAAGTCTTTCCTCAGGATCCACACATCAGACATTCATCCAACCTCATCTTTGCTaGTGTACTCCACTATTTCTG +
Preference number: 2 (lower is better)
Translates to: TCWSLPSLSSGSTHQTFIQPHLC*CTPLFL
Trigger: CAGAAATAGTGGAGTACACCAGCAAAGATGAGGTTG...GATGAATGTCTGATGTGTGGATCCTGAGGAAAGACTTGGAAGAGACCAGCATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR CCA 90 bp TTGCTGGTGTACTCCACTATTTCTGTGCACAGGTTGCTGCATTTGATGGTTCCCTCAGGCGATCTTTATTaGCCAGAACAATATCCAATG +
Preference number: 2 (lower is better)
Translates to: LLVYSTISVHRLLHLMVPSGDLY*PEQYPM
Trigger: CATTGGATATTGTTCTGGCCAATAAAGATCGCCTGA...GGGAACCATCAAATGCAGCAACCTGTGCACAGAAATAGTGGAGTACACCAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
3UTR-3UTR TCA 90 bp GCCAAATTACAAACAGCAACCTCATCTTTGCTGGTGTACTCCACTATTTCTGTGATCAAAGACCAGTCCTaGTTAGTCTCCACTCGTTTC +
Preference number: 2 (lower is better)
Translates to: AKLQTATSSLLVYSTISVIKDQS*LVSTRF
Trigger: GAAACGAGTGGAGACTAATCAGGACTGGTCTTTGAT...CACAGAAATAGTGGAGTACACCAGCAAAGATGAGGTTGCTGTTTGTAATTTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR TCA 90 bp ATATTCAGGGCCAGGGAAGCCAAATTACAAACAGCAACCTCATCTTTGCTGGTGGTCGTATGTGTGTTCTaGTGTGACATACATATTCAG +
Preference number: 2 (lower is better)
Translates to: IFRAREAKLQTATSSLLVVVCVF*CDIHIQ
Trigger: CTGAATATGTATGTCACATCAGAACACACATACGAC...CACCAGCAAAGATGAGGTTGCTGTTTGTAATTTGGCTTCCCTGGCCCTGAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR TCA 90 bp ATCTTCTCCTTGAGAACCTTCCAGTCCCATAGGTCTGTAGGAGTAACATTCCACTTGAGAACAGTTTTCTaGGAGATTTCCCACACAGTT +
Preference number: 2 (lower is better)
Translates to: IFSLRTFQSHRSVGVTFHLRTVF*EISHTV
Trigger: AACTGTGTGGGAAATCTCTCAGAAAACTGTTCTCAA...GTGGAATGTTACTCCTACAGACCTATGGGACTGGAAGGTTCTCAAGGAGAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR GCA 90 bp AGCCAAATTACAAACAGCAACCTCATCTTTGCTGGTGTACTCCACTATTTCTGTATTACTCCTTTTGCCTaGAACAGGGTCCAGCAAAGC +
Preference number: 2 (lower is better)
Translates to: SQITNSNLIFAGVLHYFCITPFA*NRVQQS
Trigger: GCTTTGCTGGACCCTGTTGCAGGCAAAAGGAGTAAT...ACAGAAATAGTGGAGTACACCAGCAAAGATGAGGTTGCTGTTTGTAATTTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR GCA 90 bp TCTCATGAGTTATCACTCAGTTTTGCTTCTAGAGACCCACCAGTCAAAGCAGTAATCAATTACTCCTTTTaGCTGCAACAGGGTCCAGCA +
Preference number: 2 (lower is better)
Translates to: SHELSLSFASRDPPVKAVINYSF*LQQGPA
Trigger: TGCTGGACCCTGTTGCAGGCAAAAGGAGTAATTGAT...TACTGCTTTGACTGGTGGGTCTCTAGAAGCAAAACTGAGTGATAACTCATGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR GCA 90 bp CTCATCTTTGCTGGTGTACTCCACTATTTCTGTGCACAGGTTGCTGCATTTGATGAGCTTTTACAACTTTaGGGACACGACCTTGTTTCT +
Preference number: 2 (lower is better)
Translates to: LIFAGVLHYFCAQVAAFDELLQL*GHDLVS
Trigger: AGAAACAAGGTCGTGTCCGCAAAGTTGTAAAAGCTC...ATCAAATGCAGCAACCTGTGCACAGAAATAGTGGAGTACACCAGCAAAGATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR GCA 90 bp CTGATTAGTCTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAATGGTTCCCAGGTTCTaGTGGTTGCTCTTTCGATTA +
Preference number: 2 (lower is better)
Translates to: LISLHSFHEEIRNPKSKEMVPRF*WLLFRL
Trigger: TAATCGAAAGAGCAACCAGCAGAACCTGGGAACCAT...TTCTTTGCTCTTTGGATTCCGGATCTCTTCATGAAACGAGTGGAGACTAATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR GCA 90 bp GGTGCCTGTTTCCGTCTGAGACTCAATGATGGCATACCAAAGCTGCTGAGCTTTATAGTTTCAAAGATCTaGTTATTCAGTAACTGGGCT +
Preference number: 2 (lower is better)
Translates to: GACFRLRLNDGIPKLLSFIVSKI*LFSNWA
Trigger: AGCCCAGTTACTGAATAAGCAGATCTTTGAAACTAT...AAAGCTCAGCAGCTTTGGTATGCCATCATTGAGTCTCAGACGGAAACAGGCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR GCA 90 bp AGTTTTGCTTCTAGAGACCCACCAGTCAAAGCAGTAAAACTAAATCTCCTTAACCAGGTAAATAGCAAATaGCCCAGGACGCTTGTTCCC +
Preference number: 2 (lower is better)
Translates to: SFASRDPPVKAVKLNLLNQVNSK*PRTLVP
Trigger: GGGAACAAGCGTCCTGGGGCATTTGCTATTTACCTG...GTTAAGGAGATTTAGTTTTACTGCTTTGACTGGTGGGTCTCTAGAAGCAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
3UTR-3UTR CCA 90 bp CAGTACTTTAAATCAATTACTCCTTTTGCCTGCAACAGGGTCCAGCAAAGCCTTGCTCAAGAAGTAGTTTaGCTACTGAAGACATGCTGG +
Preference number: 2 (lower is better)
Translates to: QYFKSITPFACNRVQQSLAQEVV*LLKTCW
Trigger: CCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGC...AAGGCTTTGCTGGACCCTGTTGCAGGCAAAAGGAGTAATTGATTTAAAGTACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR CCA 90 bp TTCCGTCTGAGACTCAATGATGGCATACCAAAGCTGCTGAGCTTTTACAACTTTGCTCAAGAAGTAGTTTaGCTACTGAAGACATGCTGG +
Preference number: 2 (lower is better)
Translates to: FRLRLNDGIPKLLSFYNFAQEVV*LLKTCW
Trigger: CCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGC...AAAGTTGTAAAAGCTCAGCAGCTTTGGTATGCCATCATTGAGTCTCAGACGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR CCA 90 bp CAGGTTCTGCTGGTTGCTCTTTCGATTACAGGAATCTTTGTAGAGCATATACGGAATTCCTTTGCTAACTaGAGAGCCCTCATAGGTTTC +
Preference number: 2 (lower is better)
Translates to: QVLLVALSITGIFVEHIRNSFAN*RALIGF
Trigger: GAAACCTATGAGGGCTCTCCAGTTAGCAAAGGAATT...CCGTATATGCTCTACAAAGATTCCTGTAATCGAAAGAGCAACCAGCAGAACCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR CCA 90 bp CATGCTGGTCTCTTCCAAGTCTTTCCTCAGGATCCACACATCAGACATTCATCTTTATTTAGAGTGAACTaGATTGGATTAGCCGCTGGT +
Preference number: 2 (lower is better)
Translates to: HAGLFQVFPQDPHIRHSSLFRVN*IGLAAG
Trigger: ACCAGCGGCTAATCCAATCCAGTTCACTCTAAATAA...AGATGAATGTCTGATGTGTGGATCCTGAGGAAAGACTTGGAAGAGACCAGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR CCA 90 bp CATGCTGGTCTCTTCCAAGTCTTTCCTCAGGATCCACACATCAGACATTCATCTTCAGGCGATCTTTATTaGCCAGAACAATATCCAATG +
Preference number: 2 (lower is better)
Translates to: HAGLFQVFPQDPHIRHSSSGDLY*PEQYPM
Trigger: CATTGGATATTGTTCTGGCCAATAAAGATCGCCTGA...AGATGAATGTCTGATGTGTGGATCCTGAGGAAAGACTTGGAAGAGACCAGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
3UTR-3UTR TCA 90 bp GTGACATACATATTCAGGGCCAGGGAAGCCAAATTACAAACAGCAACCTCATCTGTCGTATGTGTGTTCTaGTGTGACATACATATTCAG +
Preference number: 2 (lower is better)
Translates to: VTYIFRAREAKLQTATSSVVCVF*CDIHIQ
Trigger: CTGAATATGTATGTCACATCAGAACACACATACGAC...AGATGAGGTTGCTGTTTGTAATTTGGCTTCCCTGGCCCTGAATATGTATGTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR GCA 90 bp AGCCAAATTACAAACAGCAACCTCATCTTTGCTGGTGTACTCCACTATTTCTGTATGGTTCCCAGGTTCTaGTGGTTGCTCTTTCGATTA +
Preference number: 2 (lower is better)
Translates to: SQITNSNLIFAGVLHYFCMVPRF*WLLFRL
Trigger: TAATCGAAAGAGCAACCAGCAGAACCTGGGAACCAT...ACAGAAATAGTGGAGTACACCAGCAAAGATGAGGTTGCTGTTTGTAATTTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR GCA 90 bp GGTTGCTCTTTCGATTACAGGAATCTTTGTAGAGCATATACGGGGTGCCTGTTTCCATGGGAGAGTGTTTaGCATTATGTGGATTTATGT +
Preference number: 2 (lower is better)
Translates to: GCSFDYRNLCRAYTGCLFPWESV*HYVDLC
Trigger: ACATAAATCCACATAATGGCAAACACTCTCCCATGG...AAACAGGCACCCCGTATATGCTCTACAAAGATTCCTGTAATCGAAAGAGCAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
3UTR-3UTR CCA 90 bp TGGTATGCTCTGAATAGAGCCATTGCATGCAATAATCTGGTTTTTCATCTCTTCGTTCCCAGGTTCTGCTaGTTGCTCTTTCGATTACAG +
Preference number: 2 (lower is better)
Translates to: WYALNRAIACNNLVFHLFVPRFC*LLFRLQ
Trigger: CTGTAATCGAAAGAGCAACCAGCAGAACCTGGGAAC...GAAGAGATGAAAAACCAGATTATTGCATGCAATGGCTCTATTCAGAGCATACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR CCA 90 bp AGTTTTGCTTCTAGAGACCCACCAGTCAAAGCAGTAAAACTAAATCTCCTTAACGTACCCCAATTCCAATaGGGCGATGGCGTTTATTTG +
Preference number: 2 (lower is better)
Translates to: SFASRDPPVKAVKLNLLNVPQFQ*GDGVYL
Trigger: CAAATAAACGCCATCGCCCCATTGGAATTGGGGTAC...GTTAAGGAGATTTAGTTTTACTGCTTTGACTGGTGGGTCTCTAGAAGCAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR CCA 90 bp AGATTGGCTTTGATCAATGAAAGCACCTCTCTCAGCTGCCATCTTGAGAACAGTCATCAACATATGTTGTaGTCTTTCAGCCACTTTTCC +
Preference number: 2 (lower is better)
Translates to: RLALINESTSLSCHLENSHQHML*SFSHFS
Trigger: GGAAAAGTGGCTGAAAGACCACAACATATGTTGATG...ACTGTTCTCAAGATGGCAGCTGAGAGAGGTGCTTTCATTGATCAAAGCCAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
3UTR-3UTR CCA 90 bp CTTCTCATGAGTTATCACTCAGTTTTGCTTCTAGAGACCCACCAGTCAAAGCAGTCAATGTCTTCTTTGTaGATCCCAACAGATACTCTC +
Preference number: 2 (lower is better)
Translates to: LLMSYHSVLLLETHQSKQSMSSL*IPTDTL
Trigger: GAGAGTATCTGTTGGGATCCACAAAGAAGACATTGA...CTGCTTTGACTGGTGGGTCTCTAGAAGCAAAACTGAGTGATAACTCATGAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
3UTR-3UTR TCA 90 bp CTTCTCATGAGTTATCACTCAGTTTTGCTTCTAGAGACCCACCAGTCAAAGCAGTATCAGTACTTCTCATaGGTTATCACTCAGTTTTGC +
Preference number: 2 (lower is better)
Translates to: LLMSYHSVLLLETHQSKQYQYFS*VITQFC
Trigger: GCAAAACTGAGTGATAACTCATGAGAAGTACTGATA...CTGCTTTGACTGGTGGGTCTCTAGAAGCAAAACTGAGTGATAACTCATGAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR TCA 90 bp AGCCAAATTACAAACAGCAACCTCATCTTTGCTGGTGTACTCCACTATTTCTGTATGTGTGTTCTGATGTaGCATACATATTCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: SQITNSNLIFAGVLHYFCMCVLM*HTYSGP
Trigger: TGGCCCTGAATATGTATGTCACATCAGAACACACAT...ACAGAAATAGTGGAGTACACCAGCAAAGATGAGGTTGCTGTTTGTAATTTGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR TCA 90 bp AGTTTTGCTTCTAGAGACCCACCAGTCAAAGCAGTAAAACTAAATCTCCTTAACTCTCAGCTGCCATCTTaGGAACAGTTTTCTGAGAGA +
Preference number: 2 (lower is better)
Translates to: SFASRDPPVKAVKLNLLNSQLPS*EQFSER
Trigger: TCTCTCAGAAAACTGTTCTCAAGATGGCAGCTGAGA...GTTAAGGAGATTTAGTTTTACTGCTTTGACTGGTGGGTCTCTAGAAGCAAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR TCA 90 bp AGTTTTGCTTCTAGAGACCCACCAGTCAAAGCAGTAAAACTAAATCTCCTTAACAACAATATCCAATGTTaGCTTGGCCACCATGGGAGA +
Preference number: 2 (lower is better)
Translates to: SFASRDPPVKAVKLNLLNNNIQC*LGHHGR
Trigger: TCTCCCATGGTGGCCAAGTCAACATTGGATATTGTT...GTTAAGGAGATTTAGTTTTACTGCTTTGACTGGTGGGTCTCTAGAAGCAAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
3UTR-3UTR GCA 90 bp TGTTTCCGTCTGAGACTCAATGATGGCATACCAAAGCTGCTGAGCTTTTACAACCACTATACCTATCTATaGTCAAGAAGTAGTTTGGCT +
Preference number: 2 (lower is better)
Translates to: CFRLRLNDGIPKLLSFYNHYTYL*SRSSLA
Trigger: AGCCAAACTACTTCTTGAGCATAGATAGGTATAGTG...GTTGTAAAAGCTCAGCAGCTTTGGTATGCCATCATTGAGTCTCAGACGGAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR GCA 90 bp CTTCTCATGAGTTATCACTCAGTTTTGCTTCTAGAGACCCACCAGTCAAAGCAGCACTATACCTATCTATaGTCAAGAAGTAGTTTGGCT +
Preference number: 2 (lower is better)
Translates to: LLMSYHSVLLLETHQSKQHYTYL*SRSSLA
Trigger: AGCCAAACTACTTCTTGAGCATAGATAGGTATAGTG...CTGCTTTGACTGGTGGGTCTCTAGAAGCAAAACTGAGTGATAACTCATGAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR CCA 90 bp GTTTCGGACAACGACTTTAGTGACTTCAGCCAACTTCTTAAAGTCGTATGTGTGTGCTTATTCAGTAACTaGGCTTCTGCACTCTCAAAA +
Preference number: 2 (lower is better)
Translates to: VSDNDFSDFSQLLKVVCVCLFSN*ASALSK
Trigger: TTTTGAGAGTGCAGAAGCCCAGTTACTGAATAAGCA...CACACATACGACTTTAAGAAGTTGGCTGAAGTCACTAAAGTCGTTGTCCGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR GCA 90 bp CTGATTAGTCTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAACACTATACCTATCTATaGTCAAGAAGTAGTTTGGCT +
Preference number: 2 (lower is better)
Translates to: LISLHSFHEEIRNPKSKEHYTYL*SRSSLA
Trigger: AGCCAAACTACTTCTTGAGCATAGATAGGTATAGTG...TTCTTTGCTCTTTGGATTCCGGATCTCTTCATGAAACGAGTGGAGACTAATCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR GCA 90 bp TTATCACTCAGTTTTGCTTCTAGAGACCCACCAGTCAAAGCAGTAAAACTAAATAGCACCTCTCTCAGCTaGCATCTTGAGAACAGTTTT +
Preference number: 2 (lower is better)
Translates to: LSLSFASRDPPVKAVKLNSTSLS*HLENSF
Trigger: AAAACTGTTCTCAAGATGGCAGCTGAGAGAGGTGCT...ATTTAGTTTTACTGCTTTGACTGGTGGGTCTCTAGAAGCAAAACTGAGTGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR TCA 90 bp ATGAAACCTTACTTAACCACTCCCTGTATGCAAGATGACTTATTTTGCATTCCTATGTGTGTTCTGATGTaGCATACATATTCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: MKPYLTTPCMQDDLFCIPMCVLM*HTYSGP
Trigger: TGGCCCTGAATATGTATGTCACATCAGAACACACAT...AGGAATGCAAAATAAGTCATCTTGCATACAGGGAGTGGTTAAGTAAGGTTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR CCA 72 bp TCCTTTGCTAACTGGAGAGCCCTCATAGGTTTCGTATaGGCCCTGCTCCTTGGCAAGGTCACAGCTGGCTTC +
Preference number: 3 (lower is better)
Translates to: SFANWRALIGFV*ALLLGKVTAGF
Trigger: GAAGCCAGCTGTGACCTTGCCAAGGAGCAGGGCCCATACGAAACCTATGAGGGCTCTCCAGTTAGCAAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR CAA 90 bp GAGAGCCCTCATAGGTTTCGTATGGGCCCTGCTCCTTGGCAAGGTCACAGCTGGGAACAATATCCAATGTaGACTTGGCCACCATGGGAG +
Preference number: 3 (lower is better)
Translates to: ESPHRFRMGPAPWQGHSWEQYPM*TWPPWE
Trigger: CTCCCATGGTGGCCAAGTCAACATTGGATATTGTTC...CCAGCTGTGACCTTGCCAAGGAGCAGGGCCCATACGAAACCTATGAGGGCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
3UTR-3UTR CAA 90 bp GAGAGCCCTCATAGGTTTCGTATGGGCCCTGCTCCTTGGCAAGGTCACAGCTGGACAGCAACCTCATCTTaGCTGGTGTACTCCACTATT +
Preference number: 3 (lower is better)
Translates to: ESPHRFRMGPAPWQGHSWTATSS*LVYSTI
Trigger: AATAGTGGAGTACACCAGCAAAGATGAGGTTGCTGT...CCAGCTGTGACCTTGCCAAGGAGCAGGGCCCATACGAAACCTATGAGGGCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR CCA 72 bp TCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGATaGCGTTTATTTGATAGGCATGCCTCTGGTACAGGA +
Preference number: 3 (lower is better)
Translates to: SARPCTPIPMGR*RLFDRHASGTG
Trigger: TCCTGTACCAGAGGCATGCCTATCAAATAAACGCCATCGCCCCATTGGAATTGGGGTACAAGGTCTGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR CAA 90 bp GTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTTCCTCAGGATCCACAAGCATCTGCCAGACCTaGTACCCCAATTCCAATGGG +
Preference number: 3 (lower is better)
Translates to: VWLLKTCWSLPSLSSGSTSICQT*YPNSNG
Trigger: CCCATTGGAATTGGGGTACAAGGTCTGGCAGATGCT...TGTGGATCCTGAGGAAAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR CAA 90 bp GCCAGACCTTGTACCCCAATTCCAATGGGGCGATGGCGTTTATTTGATAGGCATACGCTTGTTCCCACCTaGATCCACATATCGAGCTGT +
Preference number: 3 (lower is better)
Translates to: ARPCTPIPMGRWRLFDRHTLVPT*IHISSC
Trigger: ACAGCTCGATATGTGGATCAAGGTGGGAACAAGCGT...ATGCCTATCAAATAAACGCCATCGCCCCATTGGAATTGGGGTACAAGGTCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
3UTR-3UTR CAA 90 bp ACATGCTGGTCTCTTCCAAGTCTTTCCTCAGGATCCACACATCAGACATTCATCAGCATCTGCCAGACCTaGTACCCCAATTCCAATGGG +
Preference number: 3 (lower is better)
Translates to: TCWSLPSLSSGSTHQTFISICQT*YPNSNG
Trigger: CCCATTGGAATTGGGGTACAAGGTCTGGCAGATGCT...GATGAATGTCTGATGTGTGGATCCTGAGGAAAGACTTGGAAGAGACCAGCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR CAA 90 bp ACTGAAGACATGCTGGTCTCTTCCAAGTCTTTCCTCAGGATCCACACATCAGACAATCAATTACTCCTTTaGCCTGCAACAGGGTCCAGC +
Preference number: 3 (lower is better)
Translates to: TEDMLVSSKSFLRIHTSDNQLLL*PATGSS
Trigger: GCTGGACCCTGTTGCAGGCAAAAGGAGTAATTGATT...GTCTGATGTGTGGATCCTGAGGAAAGACTTGGAAGAGACCAGCATGTCTTCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR CAA 90 bp TTGCTGGTGTACTCCACTATTTCTGTGCACAGGTTGCTGCATTTGATGGTTCCCGACCAGGACACTCATTaGGACACATCAAAGACCAGT +
Preference number: 3 (lower is better)
Translates to: LLVYSTISVHRLLHLMVPDQDTH*DTSKTS
Trigger: ACTGGTCTTTGATGTGTCCAAATGAGTGTCCTGGTC...GGGAACCATCAAATGCAGCAACCTGTGCACAGAAATAGTGGAGTACACCAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR CAA 90 bp CATGCTGGTCTCTTCCAAGTCTTTCCTCAGGATCCACACATCAGACATTCATCTCCCAGGTTCTGCTGGTaGCTCTTTCGATTACAGGAA +
Preference number: 3 (lower is better)
Translates to: HAGLFQVFPQDPHIRHSSPRFCW*LFRLQE
Trigger: TTCCTGTAATCGAAAGAGCAACCAGCAGAACCTGGG...AGATGAATGTCTGATGTGTGGATCCTGAGGAAAGACTTGGAAGAGACCAGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR CAA 90 bp GCTGCATTTGATGGTTCCCAGGTTCTGCTGGTTGCTCTTTCGATTACAGGAATCATATCCAATGTTGACTaGGCCACCATGGGAGAGTGT +
Preference number: 3 (lower is better)
Translates to: AAFDGSQVLLVALSITGIISNVD*ATMGEC
Trigger: ACACTCTCCCATGGTGGCCAAGTCAACATTGGATAT...GATTCCTGTAATCGAAAGAGCAACCAGCAGAACCTGGGAACCATCAAATGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
3UTR-3UTR CAA 90 bp GTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACCTATCTATGCTCAAAATCAATTACTCCTTTaGCCTGCAACAGGGTCCAGC +
Preference number: 3 (lower is better)
Translates to: VQQSLTTSSKPTIPIYAQNQLLL*PATGSS
Trigger: GCTGGACCCTGTTGCAGGCAAAAGGAGTAATTGATT...TTGAGCATAGATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR CAA 90 bp TGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACCTATCTTTGCGGACACGACCTaGTTTCTCATAACTTGCATA +
Preference number: 3 (lower is better)
Translates to: CNRVQQSLTTSSKPTIPIFADTT*FLITCI
Trigger: TATGCAAGTTATGAGAAACAAGGTCGTGTCCGCAAA...GATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR CAA 90 bp AGACATGCTGGTCTCTTCCAAGTCTTTCCTCAGGATCCACACATCAGACATTCAGAACAATATCCAATGTaGACTTGGCCACCATGGGAG +
Preference number: 3 (lower is better)
Translates to: RHAGLFQVFPQDPHIRHSEQYPM*TWPPWE
Trigger: CTCCCATGGTGGCCAAGTCAACATTGGATATTGTTC...TGAATGTCTGATGTGTGGATCCTGAGGAAAGACTTGGAAGAGACCAGCATGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
3UTR TCA 72 bp TGTACTCCACTATTTCTGTGCACAGGTTGCTGCATTTaGTGGTTCCCAGGTTCTGCTGGTTGCTCTTTCGAT +
Preference number: 3 (lower is better)
Translates to: CTPLFLCTGCCI*WFPGSAGCSFD
Trigger: ATCGAAAGAGCAACCAGCAGAACCTGGGAACCATCAAATGCAGCAACCTGTGCACAGAAATAGTGGAGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR GCA 72 bp TGTTTCTTTGTGCAAGTTAGAGACAGCGATCCTGGCTaGCAGGATAGCATAGTCAGGGTGCTTAGTAGTCAA +
Preference number: 3 (lower is better)
Translates to: CFFVQVRDSDPG*QDSIVRVLSSQ
Trigger: TTGACTACTAAGCACCCTGACTATGCTATCCTGGCAGCCAGGATCGCTGTCTCTAACTTGCACAAAGAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532170.5
3UTR-3UTR CAA 90 bp ATATTCAGGGCCAGGGAAGCCAAATTACAAACAGCAACCTCATCTTTGCTGGTGTGCTCAAGAAGTAGTTaGGCTACTGAAGACATGCTG +
Preference number: 3 (lower is better)
Translates to: IFRAREAKLQTATSSLLVCSRSS*ATEDML
Trigger: CAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCA...CACCAGCAAAGATGAGGTTGCTGTTTGTAATTTGGCTTCCCTGGCCCTGAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR CAA 90 bp CATGCTGGTCTCTTCCAAGTCTTTCCTCAGGATCCACACATCAGACATTCATCTTGCTCAAGAAGTAGTTaGGCTACTGAAGACATGCTG +
Preference number: 3 (lower is better)
Translates to: HAGLFQVFPQDPHIRHSSCSRSS*ATEDML
Trigger: CAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCA...AGATGAATGTCTGATGTGTGGATCCTGAGGAAAGACTTGGAAGAGACCAGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR CAA 90 bp GACGCTTGTTCCCACCTTGATCCACATATCGAGCTGTGTTGTTATATACTCTCAGACCAGGACACTCATTaGGACACATCAAAGACCAGT +
Preference number: 3 (lower is better)
Translates to: DACSHLDPHIELCCYILSDQDTH*DTSKTS
Trigger: ACTGGTCTTTGATGTGTCCAAATGAGTGTCCTGGTC...TGAGAGTATATAACAACACAGCTCGATATGTGGATCAAGGTGGGAACAAGCGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
3UTR-3UTR CAA 90 bp CCTATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAATTTCTGTGCACAGGTaGCTGCATTTGATGGTTCCC +
Preference number: 3 (lower is better)
Translates to: PIYAQEVVWLLKTCWSLPISVHR*LHLMVP
Trigger: GGGAACCATCAAATGCAGCAACCTGTGCACAGAAAT...TGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR CAA 90 bp TGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACCTATCGTGGATGTTCAAAGATaGGCTTTGATCAATGAAAGC +
Preference number: 3 (lower is better)
Translates to: CNRVQQSLTTSSKPTIPIVDVQR*ALINES
Trigger: GCTTTCATTGATCAAAGCCAATCTTTGAACATCCAC...GATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR CAA 90 bp TTTGCCTGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATAACTTTCTTTGTTTCTTaGTGCAAGTTAGAGACAGCG +
Preference number: 3 (lower is better)
Translates to: FACNRVQQSLTTSSKPTITFFVS*CKLETA
Trigger: CGCTGTCTCTAACTTGCACAAAGAAACAAAGAAAGT...TATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532170.5
3UTR-3UTR CAA 90 bp ATACATATTCAGGGCCAGGGAAGCCAAATTACAAACAGCAACCTCATCTTTGCTACGCTTGTTCCCACCTaGATCCACATATCGAGCTGT +
Preference number: 3 (lower is better)
Translates to: IHIQGQGSQITNSNLIFATLVPT*IHISSC
Trigger: ACAGCTCGATATGTGGATCAAGGTGGGAACAAGCGT...AGCAAAGATGAGGTTGCTGTTTGTAATTTGGCTTCCCTGGCCCTGAATATGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
3UTR TCA 72 bp CAGGCGATCTTTATTGGCCAGAACAATATCCAATGTTaGCTTGGCCACCATGGGAGAGTGTTTGCCATTATG +
Preference number: 3 (lower is better)
Translates to: QAIFIGQNNIQC*LGHHGRVFAIM
Trigger: CATAATGGCAAACACTCTCCCATGGTGGCCAAGTCAACATTGGATATTGTTCTGGCCAATAAAGATCGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
3UTR CCA 72 bp ATTCCACATATCATACTGAAGAATTCCTTTGCTAACTaGAGAGCCCTCATAGGTTTCGTATGGGCCCTGCTC +
Preference number: 3 (lower is better)
Translates to: IPHIILKNSFAN*RALIGFVWALL
Trigger: GAGCAGGGCCCATACGAAACCTATGAGGGCTCTCCAGTTAGCAAAGGAATTCTTCAGTATGATATGTGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR CAA 90 bp CTGATTAGTCTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAATTTCTGTGCACAGGTaGCTGCATTTGATGGTTCCC +
Preference number: 3 (lower is better)
Translates to: LISLHSFHEEIRNPKSKEISVHR*LHLMVP
Trigger: GGGAACCATCAAATGCAGCAACCTGTGCACAGAAAT...TTCTTTGCTCTTTGGATTCCGGATCTCTTCATGAAACGAGTGGAGACTAATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR CAA 90 bp CCTATCAGTACTTCTCATGAGTTATCACTCAGTTTTGCTTCTAGAGACCCACCAATATCCAATGTTGACTaGGCCACCATGGGAGAGTGT +
Preference number: 3 (lower is better)
Translates to: PISTSHELSLSFASRDPPISNVD*ATMGEC
Trigger: ACACTCTCCCATGGTGGCCAAGTCAACATTGGATAT...TGGTGGGTCTCTAGAAGCAAAACTGAGTGATAACTCATGAGAAGTACTGATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
3UTR-3UTR CAA 90 bp GTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTTCCTCAGGATCCACATTCAGGCGATCTTTATaGGCCAGAACAATATCCAAT +
Preference number: 3 (lower is better)
Translates to: VWLLKTCWSLPSLSSGSTFRRSL*ARTISN
Trigger: ATTGGATATTGTTCTGGCCAATAAAGATCGCCTGAA...TGTGGATCCTGAGGAAAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
3UTR-3UTR CAA 90 bp CCACATATCATACTGAAGAATTCCTTTGCTAACTGGAGAGCCCTCATAGGTTTCATCGGTACAAGGCCATaGGAATTGCCATTAGTCCCA +
Preference number: 3 (lower is better)
Translates to: PHIILKNSFANWRALIGFIGTRP*ELPLVP
Trigger: TGGGACTAATGGCAATTCCAATGGCCTTGTACCGAT...GAAACCTATGAGGGCTCTCCAGTTAGCAAAGGAATTCTTCAGTATGATATGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
3UTR TCA 72 bp GACTTCAGCCAACTTCTTAAAGTCGTATGTGTGTTCTaGTGTGACATACATATTCAGGGCCAGGGAAGCCAA +
Preference number: 3 (lower is better)
Translates to: DFSQLLKVVCVF*CDIHIQGQGSQ
Trigger: TTGGCTTCCCTGGCCCTGAATATGTATGTCACATCAGAACACACATACGACTTTAAGAAGTTGGCTGAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR CAA 90 bp CAGTACTTTAAATCAATTACTCCTTTTGCCTGCAACAGGGTCCAGCAAAGCCTTTGCTCAAGAAGTAGTTaGGCTACTGAAGACATGCTG +
Preference number: 3 (lower is better)
Translates to: QYFKSITPFACNRVQQSLCSRSS*ATEDML
Trigger: CAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCA...AAGGCTTTGCTGGACCCTGTTGCAGGCAAAAGGAGTAATTGATTTAAAGTACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR CAA 90 bp AGATTGGCTTTGATCAATGAAAGCACCTCTCTCAGCTGCCATCTTGAGAACAGTTTTGCGGACACGACCTaGTTTCTCATAACTTGCATA +
Preference number: 3 (lower is better)
Translates to: RLALINESTSLSCHLENSFADTT*FLITCI
Trigger: TATGCAAGTTATGAGAAACAAGGTCGTGTCCGCAAA...ACTGTTCTCAAGATGGCAGCTGAGAGAGGTGCTTTCATTGATCAAAGCCAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR CAA 90 bp AGTTTTGCTTCTAGAGACCCACCAGTCAAAGCAGTAAAACTAAATCTCCTTAACGGCGATGGCGTTTATTaGATAGGCATGCCTCTGGTA +
Preference number: 3 (lower is better)
Translates to: SFASRDPPVKAVKLNLLNGDGVY*IGMPLV
Trigger: TACCAGAGGCATGCCTATCAAATAAACGCCATCGCC...GTTAAGGAGATTTAGTTTTACTGCTTTGACTGGTGGGTCTCTAGAAGCAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR CAA 90 bp AGCCAAATTACAAACAGCAACCTCATCTTTGCTGGTGTACTCCACTATTTCTGTACAAGGCCATTGGAATaGCCATTAGTCCCAGCAATG +
Preference number: 3 (lower is better)
Translates to: SQITNSNLIFAGVLHYFCTRPLE*PLVPAM
Trigger: CATTGCTGGGACTAATGGCAATTCCAATGGCCTTGT...ACAGAAATAGTGGAGTACACCAGCAAAGATGAGGTTGCTGTTTGTAATTTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
3UTR GCA 72 bp CCATTGCATGCAATAATCTGGTTTTTCATCTCTTCATaGCATAGGCCCCGCTCGGTAAGATCTTTCAATAAG +
Preference number: 3 (lower is better)
Translates to: PLHAIIWFFISS*HRPRSVRSFNK
Trigger: CTTATTGAAAGATCTTACCGAGCGGGGCCTATGGCATGAAGAGATGAAAAACCAGATTATTGCATGCAATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR CCA 72 bp TGGCCAGAACAATATCCAATGTTGACTTGGCCACCATaGGAGAGTGTTTGCCATTATGTGGATTTATGTAGT +
Preference number: 3 (lower is better)
Translates to: WPEQYPMLTWPP*ESVCHYVDLCS
Trigger: ACTACATAAATCCACATAATGGCAAACACTCTCCCATGGTGGCCAAGTCAACATTGGATATTGTTCTGGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
3UTR CCA 72 bp GATCTTTATTGGCCAGAACAATATCCAATGTTGACTTaGCCACCATGGGAGAGTGTTTGCCATTATGTGGAT +
Preference number: 3 (lower is better)
Translates to: DLYWPEQYPMLT*PPWESVCHYVD
Trigger: ATCCACATAATGGCAAACACTCTCCCATGGTGGCCAAGTCAACATTGGATATTGTTCTGGCCAATAAAGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
3UTR-3UTR CAA 90 bp TTCCAAGTCTTTCCTCAGGATCCACACATCAGACATTCATCTCTATTCTCCAAATTTGCAATCTTCTCCTaGAGAACCTTCCAGTCCCAT +
Preference number: 3 (lower is better)
Translates to: FQVFPQDPHIRHSSLFSKFAIFS*RTFQSH
Trigger: ATGGGACTGGAAGGTTCTCAAGGAGAAGATTGCAAA...TTTGGAGAATAGAGATGAATGTCTGATGTGTGGATCCTGAGGAAAGACTTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR CAA 90 bp ATGAAACCTTACTTAACCACTCCCTGTATGCAAGATGACTTATTTTGCATTCCTGAAAGTTGTGGGCGGTaGGTACCAGCATTGAAGAGA +
Preference number: 3 (lower is better)
Translates to: MKPYLTTPCMQDDLFCIPESCGR*VPALKR
Trigger: TCTCTTCAATGCTGGTACCAACCGCCCACAACTTTC...AGGAATGCAAAATAAGTCATCTTGCATACAGGGAGTGGTTAAGTAAGGTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
3UTR CCA 72 bp AAACCCACTATACCTATCTATGCTCAAGAAGTAGTTTaGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTT +
Preference number: 3 (lower is better)
Translates to: KPTIPIYAQEVV*LLKTCWSLPSL
Trigger: AAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATAGGTATAGTGGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR CAA 90 bp TGGTATGCTCTGAATAGAGCCATTGCATGCAATAATCTGGTTTTTCATCTCTTCACAGCAACCTCATCTTaGCTGGTGTACTCCACTATT +
Preference number: 3 (lower is better)
Translates to: WYALNRAIACNNLVFHLFTATSS*LVYSTI
Trigger: AATAGTGGAGTACACCAGCAAAGATGAGGTTGCTGT...GAAGAGATGAAAAACCAGATTATTGCATGCAATGGCTCTATTCAGAGCATACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR CAA 90 bp CCACATATCATACTGAAGAATTCCTTTGCTAACTGGAGAGCCCTCATAGGTTTCGTGGATGTTCAAAGATaGGCTTTGATCAATGAAAGC +
Preference number: 3 (lower is better)
Translates to: PHIILKNSFANWRALIGFVDVQR*ALINES
Trigger: GCTTTCATTGATCAAAGCCAATCTTTGAACATCCAC...GAAACCTATGAGGGCTCTCCAGTTAGCAAAGGAATTCTTCAGTATGATATGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR-3UTR CAA 90 bp GATAAAGGTCCTATCAGTACTTCTCATGAGTTATCACTCAGTTTTGCTTCTAGAACCATGGGAGAGTGTTaGCCATTATGTGGATTTATG +
Preference number: 3 (lower is better)
Translates to: DKGPISTSHELSLSFASRTMGEC*PLCGFM
Trigger: CATAAATCCACATAATGGCAAACACTCTCCCATGGT...TCTAGAAGCAAAACTGAGTGATAACTCATGAGAAGTACTGATAGGACCTTTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
3UTR-3UTR CAA 90 bp TTTGCTTCTAGAGACCCACCAGTCAAAGCAGTAAAACTAAATCTCCTTAACAAAACCATGGGAGAGTGTTaGCCATTATGTGGATTTATG +
Preference number: 3 (lower is better)
Translates to: FASRDPPVKAVKLNLLNKTMGEC*PLCGFM
Trigger: CATAAATCCACATAATGGCAAACACTCTCCCATGGT...TTTGTTAAGGAGATTTAGTTTTACTGCTTTGACTGGTGGGTCTCTAGAAGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
CDS-3UTR GCA 90 bp AGCCCTCATAGGTTTCGTATGGGCCCTGCTCCTTGGCAAGGTCACAGCTGGCTTGTTTCGTATGGGCCCTaGTCCTTGGCAAGGTCACAG +
Preference number: 4 (lower is better)
Translates to: SPHRFRMGPAPWQGHSWLVSYGP*SLARSQ
Trigger: CTGTGACCTTGCCAAGGAGCAGGGCCCATACGAAAC...AAGCCAGCTGTGACCTTGCCAAGGAGCAGGGCCCATACGAAACCTATGAGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp AGCCCTCATAGGTTTCGTATGGGCCCTGCTCCTTGGCAAGGTCACAGCTGGCTTACCTTGTTCCCACCTTaGTCCACATATCGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: SPHRFRMGPAPWQGHSWLTLFPP*STYRAV
Trigger: CACAGCTCGATATGTGGATCAAGGTGGGAACAAGGT...AAGCCAGCTGTGACCTTGCCAAGGAGCAGGGCCCATACGAAACCTATGAGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533495.5
CDS-3UTR TCA 90 bp CAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACCTATCTATGCGGCGGCCATCTCGCTTaGTCACATGCATCGCAGCTA +
Preference number: 4 (lower is better)
Translates to: QGPAKPYHLKQTHYTYLCGGHLA*SHASQL
Trigger: TAGCTGCGATGCATGTGATCAAGCGAGATGGCCGCC...GCATAGATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR TCA 90 bp CTGGAGAGCCCTCATAGGTTTCGTATGGGCCCTGCTCCTTGGCAAGGTCACAGCTCTCCACTCGTTTCATaGAGAGATCCGGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: LESPHRFRMGPAPWQGHSSPLVS*RDPESK
Trigger: TTTGGATTCCGGATCTCTTCATGAAACGAGTGGAGA...GCTGTGACCTTGCCAAGGAGCAGGGCCCATACGAAACCTATGAGGGCTCTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp ACCAGGACACTCATTTGGACACATCAAAGACCAGTCCTGATTAGTCTCCACTCGGATCCAAGACTGGACTaGGGCTCTAAAGCGCCGGCG +
Preference number: 4 (lower is better)
Translates to: TRTLIWTHQRPVLISLHSDPRLD*GSKAPA
Trigger: CGCCGGCGCTTTAGAGCCGCAGTCCAGTCTTGGATC...CGAGTGGAGACTAATCAGGACTGGTCTTTGATGTGTCCAAATGAGTGTCCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
CDS-3UTR TCA 90 bp TTGCCTGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACTTATTCCCCAGGATCTaGGCAGTGGAAGCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: LPATGSSKALPPQANPLYLFPRI*AVEAVG
Trigger: GCCTACAGCTTCCACTGCTCAGATCCTGGGGAATAA...GTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp ACTCCTTTTGCCTGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCAGAGCATATACGGGGTaGCTGTTTCCGTCTGAGACT +
Preference number: 4 (lower is better)
Translates to: TPFACNRVQQSLTTSSKPRAYTG*LFPSET
Trigger: AGTCTCAGACGGAAACAGGCACCCCGTATATGCTCT...GGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCAAAAGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp AGCCCTCATAGGTTTCGTATGGGCCCTGCTCCTTGGCAAGGTCACAGCTGGCTTAGCACCTCTCTCAGCTaGCATCTTGAGAACAGTTTT +
Preference number: 4 (lower is better)
Translates to: SPHRFRMGPAPWQGHSWLSTSLS*HLENSF
Trigger: AAAACTGTTCTCAAGATGGCAGCTGAGAGAGGTGCT...AAGCCAGCTGTGACCTTGCCAAGGAGCAGGGCCCATACGAAACCTATGAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp CTGGAGAGCCCTCATAGGTTTCGTATGGGCCCTGCTCCTTGGCAAGGTCACAGCAATTCCTTTGCTAACTaGAGAGCCCTCATAGGTTTC +
Preference number: 4 (lower is better)
Translates to: LESPHRFRMGPAPWQGHSNSFAN*RALIGF
Trigger: GAAACCTATGAGGGCTCTCCAGTTAGCAAAGGAATT...GCTGTGACCTTGCCAAGGAGCAGGGCCCATACGAAACCTATGAGGGCTCTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp GAGCATATACGGGGTGCCTGTTTCCGTCTGAGACTCAATGATGGCATACCAAAGGGTTGGTACCAGCATTaGAGAGAGTGGGCGAAGCAT +
Preference number: 4 (lower is better)
Translates to: EHIRGACFRLRLNDGIPKGWYQH*REWAKH
Trigger: ATGCTTCGCCCACTCTCTTCAATGCTGGTACCAACC...CTTTGGTATGCCATCATTGAGTCTCAGACGGAAACAGGCACCCCGTATATGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
CDS-3UTR TCA 90 bp GTAGAGCATATACGGGGTGCCTGTTTCCGTCTGAGACTCAATGATGGCATACCAGGTTGGTACCAGCATTaGAGAGAGTGGGCGAAGCAT +
Preference number: 4 (lower is better)
Translates to: VEHIRGACFRLRLNDGIPGWYQH*REWAKH
Trigger: ATGCTTCGCCCACTCTCTTCAATGCTGGTACCAACC...TGGTATGCCATCATTGAGTCTCAGACGGAAACAGGCACCCCGTATATGCTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
CDS-3UTR TCA 90 bp CAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACCTATCTATGCCGCTTGTTCCCACCTTaGTCCACATATCGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: QGPAKPYHLKQTHYTYLCRLFPP*STYRAV
Trigger: CACAGCTCGATATGTGGATCAAGGTGGGAACAAGCG...GCATAGATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR TCA 90 bp ACTCCTTTTGCCTGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCGCATACCAAAGCTGCTaGGCTTTTACAACTTTGCGG +
Preference number: 4 (lower is better)
Translates to: TPFACNRVQQSLTTSSKPAYQSC*AFTTLR
Trigger: CCGCAAAGTTGTAAAAGCTCAGCAGCTTTGGTATGC...GGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCAAAAGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp GTAGAGCATATACGGGGTGCCTGTTTCCGTCTGAGACTCAATGATGGCATACCATTATTCCCCAGGATCTaGGCAGTGGAAGCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: VEHIRGACFRLRLNDGIPLFPRI*AVEAVG
Trigger: GCCTACAGCTTCCACTGCTCAGATCCTGGGGAATAA...TGGTATGCCATCATTGAGTCTCAGACGGAAACAGGCACCCCGTATATGCTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp TTGCCTGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACAGATCTCTGGCACGCTaGTCTTCCTTTCCTGTGTTC +
Preference number: 4 (lower is better)
Translates to: LPATGSSKALPPQANPLYRSLAR*SSFPVF
Trigger: GAACACAGGAAAGGAAGAGCAGCGTGCCAGAGATCT...GTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp TTGCCTGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACAGAGCATATACGGGGTaGCTGTTTCCGTCTGAGACT +
Preference number: 4 (lower is better)
Translates to: LPATGSSKALPPQANPLYRAYTG*LFPSET
Trigger: AGTCTCAGACGGAAACAGGCACCCCGTATATGCTCT...GTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp CAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACCTATCTATGCCCAAAGAGCACACCATaGCTGCTGTGTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: QGPAKPYHLKQTHYTYLCPKSTP*LLCSSP
Trigger: AGGAGAGGAACACAGCAGCCATGGTGTGCTCTTTGG...GCATAGATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp ACATGCTGGTCTCTTCCAAGTCTTTCCTCAGGATCCACACATCAGACATTCATCATCGCAGCTAGTGGCTaGGGCTCTGAAGGATCCAAG +
Preference number: 4 (lower is better)
Translates to: TCWSLPSLSSGSTHQTFIIAASG*GSEGSK
Trigger: CTTGGATCCTTCAGAGCCTCAGCCACTAGCTGCGAT...GATGAATGTCTGATGTGTGGATCCTGAGGAAAGACTTGGAAGAGACCAGCATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
CDS-3UTR TCA 90 bp TTGGCCAGAACAATATCCAATGTTGACTTGGCCACCATGGGAGAGTGTTTGCCACTAGTTCCACTGTGGTaGCCCCACTGTACAAGCCTT +
Preference number: 4 (lower is better)
Translates to: LARTISNVDLATMGECLPLVPLW*PHCTSL
Trigger: AAGGCTTGTACAGTGGGGTCACCACAGTGGAACTAG...TGGCAAACACTCTCCCATGGTGGCCAAGTCAACATTGGATATTGTTCTGGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532170.5
CDS-3UTR TCA 90 bp TTTGCCTGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATAAGAGTGGGCGAAGCATaGGTAAACCACCTCTCAGAA +
Preference number: 4 (lower is better)
Translates to: FACNRVQQSLTTSSKPTIRVGEA*VNHLSE
Trigger: TTCTGAGAGGTGGTTTACTCATGCTTCGCCCACTCT...TATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR TCA 90 bp GGTGCCTGTTTCCGTCTGAGACTCAATGATGGCATACCAAAGCTGCTGAGCTTTAGAGTGGGCGAAGCATaGGTAAACCACCTCTCAGAA +
Preference number: 4 (lower is better)
Translates to: GACFRLRLNDGIPKLLSFRVGEA*VNHLSE
Trigger: TTCTGAGAGGTGGTTTACTCATGCTTCGCCCACTCT...AAAGCTCAGCAGCTTTGGTATGCCATCATTGAGTCTCAGACGGAAACAGGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
CDS-3UTR TCA 90 bp CTGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACCTATCCGTCTGAGACTCAATaGTGGCATACCAAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LQQGPAKPYHLKQTHYTYPSETQ*WHTKAA
Trigger: AGCAGCTTTGGTATGCCATCATTGAGTCTCAGACGG...ATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp GAGCATATACGGGGTGCCTGTTTCCGTCTGAGACTCAATGATGGCATACCAAAGGTGCCTGTTTCCGTCTaGGACTCAATGATGGCATAC +
Preference number: 4 (lower is better)
Translates to: EHIRGACFRLRLNDGIPKVPVSV*DSMMAY
Trigger: GTATGCCATCATTGAGTCTCAGACGGAAACAGGCAC...CTTTGGTATGCCATCATTGAGTCTCAGACGGAAACAGGCACCCCGTATATGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp TTACTCCTTTTGCCTGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACACAGGTTGCTGCATTTaGTGGTTCCCAGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LLLLPATGSSKALPPQANTGCCI*WFPGSA
Trigger: AGCAGAACCTGGGAACCATCAAATGCAGCAACCTGT...GTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCAAAAGGAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp GTAGAGCATATACGGGGTGCCTGTTTCCGTCTGAGACTCAATGATGGCATACCAACAGGTTGCTGCATTTaGTGGTTCCCAGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: VEHIRGACFRLRLNDGIPTGCCI*WFPGSA
Trigger: AGCAGAACCTGGGAACCATCAAATGCAGCAACCTGT...TGGTATGCCATCATTGAGTCTCAGACGGAAACAGGCACCCCGTATATGCTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp ACTCCTTTTGCCTGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCATTGGCTTTGATCAATaGAAGCACCTCTCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: TPFACNRVQQSLTTSSKPIGFDQ*KHLSQL
Trigger: CAGCTGAGAGAGGTGCTTTCATTGATCAAAGCCAAT...GGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCAAAAGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp GGTGCCTGTTTCCGTCTGAGACTCAATGATGGCATACCAAAGCTGCTGAGCTTTCTCTTGTTCCCACCTTaGTCCACATATCGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: GACFRLRLNDGIPKLLSFLLFPP*STYRAV
Trigger: CACAGCTCGATATGTGGATCAAGGTGGGAACAAGAG...AAAGCTCAGCAGCTTTGGTATGCCATCATTGAGTCTCAGACGGAAACAGGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528442.5
CDS-3UTR TCA 90 bp ATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCCACCTCGGACACCCTaGCTCAGCATTTCCGGGTTC +
Preference number: 4 (lower is better)
Translates to: IYAQEVVWLLKTCWSLPSPPRTP*LSISGF
Trigger: GAACCCGGAAATGCTGAGTCAGGGTGTCCGAGGTGG...ACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534285.5
CDS-3UTR GCA 90 bp TCTCATGAGTTATCACTCAGTTTTGCTTCTAGAGACCCACCAGTCAAAGCAGTAGATCCAAGACTGGACTaGGGCTCTAAAGCGCCGGCG +
Preference number: 4 (lower is better)
Translates to: SHELSLSFASRDPPVKAVDPRLD*GSKAPA
Trigger: CGCCGGCGCTTTAGAGCCGCAGTCCAGTCTTGGATC...TACTGCTTTGACTGGTGGGTCTCTAGAAGCAAAACTGAGTGATAACTCATGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR GCA 90 bp TTTTGCCTGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATAGATCTCTGGCACGCTaGTCTTCCTTTCCTGTGTTC +
Preference number: 4 (lower is better)
Translates to: FCLQQGPAKPYHLKQTHYRSLAR*SSFPVF
Trigger: GAACACAGGAAAGGAAGAGCAGCGTGCCAGAGATCT...ATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp AAACAGCAACCTCATCTTTGCTGGTGTACTCCACTATTTCTGTGCACAGGTTGCGTTTCGTATGGGCCCTaGTCCTTGGCAAGGTCACAG +
Preference number: 4 (lower is better)
Translates to: KQQPHLCWCTPLFLCTGCVSYGP*SLARSQ
Trigger: CTGTGACCTTGCCAAGGAGCAGGGCCCATACGAAAC...GCAACCTGTGCACAGAAATAGTGGAGTACACCAGCAAAGATGAGGTTGCTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp CATGCTGGTCTCTTCCAAGTCTTTCCTCAGGATCCACACATCAGACATTCATCTGTTTCGTATGGGCCCTaGTCCTTGGCAAGGTCACAG +
Preference number: 4 (lower is better)
Translates to: HAGLFQVFPQDPHIRHSSVSYGP*SLARSQ
Trigger: CTGTGACCTTGCCAAGGAGCAGGGCCCATACGAAAC...AGATGAATGTCTGATGTGTGGATCCTGAGGAAAGACTTGGAAGAGACCAGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp ACCAGGACACTCATTTGGACACATCAAAGACCAGTCCTGATTAGTCTCCACTCGCTCAGGGGAAAGAACTaGAGTTGGAGCCAGACAGCA +
Preference number: 4 (lower is better)
Translates to: TRTLIWTHQRPVLISLHSLRGKN*SWSQTA
Trigger: TGCTGTCTGGCTCCAACTCCAGTTCTTTCCCCTGAG...CGAGTGGAGACTAATCAGGACTGGTCTTTGATGTGTCCAAATGAGTGTCCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CCA 90 bp TGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACCTATCAACATGACTCGTTCTTaGCGGCCATCTCGCTTGATC +
Preference number: 4 (lower is better)
Translates to: CNRVQQSLTTSSKPTIPINMTRS*RPSRLI
Trigger: GATCAAGCGAGATGGCCGCCAAGAACGAGTCATGTT...GATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CCA 90 bp CCCAGTCTTCAAACCCTGCTTCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCACAGCTAGAAAGTTGTaGGCGGTTGGTACCAGCATT +
Preference number: 4 (lower is better)
Translates to: PSLQTLLPAVEVHTSEFATARKL*AVGTSI
Trigger: AATGCTGGTACCAACCGCCCACAACTTTCTAGCTGT...GGCAAACTCACTAGTATGCACTTCTACGGCTGGAAGCAGGGTTTGAAGACTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
CDS-3UTR TCA 90 bp TACCACCTCAAGCAAACCCACTATACCTATCTATGCTCAAGAAGTAGTTTGGCTGGCGGCCATCTCGCTTaGTCACATGCATCGCAGCTA +
Preference number: 4 (lower is better)
Translates to: YHLKQTHYTYLCSRSSLAGGHLA*SHASQL
Trigger: TAGCTGCGATGCATGTGATCAAGCGAGATGGCCGCC...AGCCAAACTACTTCTTGAGCATAGATAGGTATAGTGGGTTTGCTTGAGGTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR TCA 90 bp GACATGCTGGTCTCTTCCAAGTCTTTCCTCAGGATCCACACATCAGACATTCATCGCTTGTTCCCACCTTaGTCCACATATCGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: DMLVSSKSFLRIHTSDIHRLFPP*STYRAV
Trigger: CACAGCTCGATATGTGGATCAAGGTGGGAACAAGCG...ATGAATGTCTGATGTGTGGATCCTGAGGAAAGACTTGGAAGAGACCAGCATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
CDS-3UTR TCA 90 bp TTTGCCTGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATAGCATACCAAAGCTGCTaGGCTTTTACAACTTTGCGG +
Preference number: 4 (lower is better)
Translates to: FACNRVQQSLTTSSKPTIAYQSC*AFTTLR
Trigger: CCGCAAAGTTGTAAAAGCTCAGCAGCTTTGGTATGC...TATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp TTGCTGGTGTACTCCACTATTTCTGTGCACAGGTTGCTGCATTTGATGGTTCCCCCGTCTGAGACTCAATaGTGGCATACCAAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LLVYSTISVHRLLHLMVPPSETQ*WHTKAA
Trigger: AGCAGCTTTGGTATGCCATCATTGAGTCTCAGACGG...GGGAACCATCAAATGCAGCAACCTGTGCACAGAAATAGTGGAGTACACCAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp TTGGCCAGAACAATATCCAATGTTGACTTGGCCACCATGGGAGAGTGTTTGCCACCGTCTGAGACTCAATaGTGGCATACCAAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LARTISNVDLATMGECLPPSETQ*WHTKAA
Trigger: AGCAGCTTTGGTATGCCATCATTGAGTCTCAGACGG...TGGCAAACACTCTCCCATGGTGGCCAAGTCAACATTGGATATTGTTCTGGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
CDS-3UTR TCA 90 bp GCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTTCCTTATTCCCCAGGATCTaGGCAGTGGAAGCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: AQEVVWLLKTCWSLPSLSLFPRI*AVEAVG
Trigger: GCCTACAGCTTCCACTGCTCAGATCCTGGGGAATAA...GGAAAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR GCA 90 bp GTGACATACATATTCAGGGCCAGGGAAGCCAAATTACAAACAGCAACCTCATCTGACAGCGATCCTGGCTaGCAGGATAGCATAGTCAGG +
Preference number: 4 (lower is better)
Translates to: VTYIFRAREAKLQTATSSDSDPG*QDSIVR
Trigger: CCTGACTATGCTATCCTGGCAGCCAGGATCGCTGTC...AGATGAGGTTGCTGTTTGTAATTTGGCTTCCCTGGCCCTGAATATGTATGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532170.5
CDS-3UTR GCA 90 bp CTGCTGGTTGCTCTTTCGATTACAGGAATCTTTGTAGAGCATATACGGGGTGCCCAGGTAAATAGCAAATaGCCCAGGACGCTTGTTCCC +
Preference number: 4 (lower is better)
Translates to: LLVALSITGIFVEHIRGAQVNSK*PRTLVP
Trigger: GGGAACAAGCGTCCTGGGGCATTTGCTATTTACCTG...GGCACCCCGTATATGCTCTACAAAGATTCCTGTAATCGAAAGAGCAACCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
CDS-3UTR GCA 90 bp TGGCCAGAACAATATCCAATGTTGACTTGGCCACCATGGGAGAGTGTTTGCCATAGATCTCTGGCACGCTaGTCTTCCTTTCCTGTGTTC +
Preference number: 4 (lower is better)
Translates to: WPEQYPMLTWPPWESVCHRSLAR*SSFPVF
Trigger: GAACACAGGAAAGGAAGAGCAGCGTGCCAGAGATCT...ATGGCAAACACTCTCCCATGGTGGCCAAGTCAACATTGGATATTGTTCTGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
CDS-3UTR GCA 90 bp TGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTTCGTTTCGTATGGGCCCTaGTCCTTGGCAAGGTCACAG +
Preference number: 4 (lower is better)
Translates to: CSRSSLATEDMLVSSKSFVSYGP*SLARSQ
Trigger: CTGTGACCTTGCCAAGGAGCAGGGCCCATACGAAAC...GAAAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR CCA 90 bp TTTTGCCTGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACAGCTAGAAAGTTGTaGGCGGTTGGTACCAGCATT +
Preference number: 4 (lower is better)
Translates to: FCLQQGPAKPYHLKQTHYTARKL*AVGTSI
Trigger: AATGCTGGTACCAACCGCCCACAACTTTCTAGCTGT...ATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CCA 90 bp ACATGCTGGTCTCTTCCAAGTCTTTCCTCAGGATCCACACATCAGACATTCATCCTCATAGGTTTCGTATaGGCCCTGCTCCTTGGCAAG +
Preference number: 4 (lower is better)
Translates to: TCWSLPSLSSGSTHQTFILIGFV*ALLLGK
Trigger: CTTGCCAAGGAGCAGGGCCCATACGAAACCTATGAG...GATGAATGTCTGATGTGTGGATCCTGAGGAAAGACTTGGAAGAGACCAGCATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp GCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTTCCCCAAAGAGCACACCATaGCTGCTGTGTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: AQEVVWLLKTCWSLPSLSPKSTP*LLCSSP
Trigger: AGGAGAGGAACACAGCAGCCATGGTGTGCTCTTTGG...GGAAAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR TCA 90 bp TATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGATCGCAGCTAGTGGCTaGGGCTCTGAAGGATCCAAG +
Preference number: 4 (lower is better)
Translates to: YLCSRSSLATEDMLVSSKIAASG*GSEGSK
Trigger: CTTGGATCCTTCAGAGCCTCAGCCACTAGCTGCGAT...CTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR TCA 90 bp CCTATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCACTAGTTCCACTGTGGTaGCCCCACTGTACAAGCCTT +
Preference number: 4 (lower is better)
Translates to: PIYAQEVVWLLKTCWSLPLVPLW*PHCTSL
Trigger: AAGGCTTGTACAGTGGGGTCACCACAGTGGAACTAG...TGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300738.10
ENST00000532170.5
CDS-3UTR TCA 90 bp CACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAAAGATCTCTGGCGGTTGGTACCAGCATTaGAGAGAGTGGGCGAAGCAT +
Preference number: 4 (lower is better)
Translates to: HSFHEEIRNPKSKEKISGGWYQH*REWAKH
Trigger: ATGCTTCGCCCACTCTCTTCAATGCTGGTACCAACC...GCCAGAGATCTTTTCTTTGCTCTTTGGATTCCGGATCTCTTCATGAAACGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
CDS-3UTR TCA 90 bp CAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACCTATCTATGCTCTCCACTCGTTTCATaGAGAGATCCGGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: QGPAKPYHLKQTHYTYLCSPLVS*RDPESK
Trigger: TTTGGATTCCGGATCTCTTCATGAAACGAGTGGAGA...GCATAGATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp CTGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACCTATTCTCCACTCGTTTCATaGAGAGATCCGGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: LQQGPAKPYHLKQTHYTYSPLVS*RDPESK
Trigger: TTTGGATTCCGGATCTCTTCATGAAACGAGTGGAGA...ATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp TTTTGCCTGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATATCAAAGACCAGTCCTaGTTAGTCTCCACTCGTTTC +
Preference number: 4 (lower is better)
Translates to: FCLQQGPAKPYHLKQTHYIKDQS*LVSTRF
Trigger: GAAACGAGTGGAGACTAATCAGGACTGGTCTTTGAT...ATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp GCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTTCCCCGTCTGAGACTCAATaGTGGCATACCAAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: AQEVVWLLKTCWSLPSLSPSETQ*WHTKAA
Trigger: AGCAGCTTTGGTATGCCATCATTGAGTCTCAGACGG...GGAAAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR TCA 90 bp CTTTCGATTACAGGAATCTTTGTAGAGCATATACGGGGTGCCTGTTTCCGTCTGGTGCCTGTTTCCGTCTaGGACTCAATGATGGCATAC +
Preference number: 4 (lower is better)
Translates to: LSITGIFVEHIRGACFRLVPVSV*DSMMAY
Trigger: GTATGCCATCATTGAGTCTCAGACGGAAACAGGCAC...CAGACGGAAACAGGCACCCCGTATATGCTCTACAAAGATTCCTGTAATCGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp CAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACCTATCTATGCTTGCAATCTTCTCCTTaGGAACCTTCCAGTCCCATA +
Preference number: 4 (lower is better)
Translates to: QGPAKPYHLKQTHYTYLCLQSSP*EPSSPI
Trigger: TATGGGACTGGAAGGTTCTCAAGGAGAAGATTGCAA...GCATAGATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp TGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACCTATCTTGCAATCTTCTCCTTaGGAACCTTCCAGTCCCATA +
Preference number: 4 (lower is better)
Translates to: CNRVQQSLTTSSKPTIPILQSSP*EPSSPI
Trigger: TATGGGACTGGAAGGTTCTCAAGGAGAAGATTGCAA...GATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp TTTGCCTGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATATCTCAGCTGCCATCTTaGGAACAGTTTTCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: FACNRVQQSLTTSSKPTISQLPS*EQFSER
Trigger: TCTCTCAGAAAACTGTTCTCAAGATGGCAGCTGAGA...TATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp TCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAAAGATCTCTGGCACGTTAGGTTCCAGGCGCTaGTCAGGGGAAAGAACTGGA +
Preference number: 4 (lower is better)
Translates to: SFHEEIRNPKSKEKISGTLGSRR*SGERTG
Trigger: TCCAGTTCTTTCCCCTGAGCAGCGCCTGGAACCTAA...CGTGCCAGAGATCTTTTCTTTGCTCTTTGGATTCCGGATCTCTTCATGAAACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
CDS-3UTR GCA 90 bp GTCCTGATTAGTCTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAATTAGGTTCCAGGCGCTaGTCAGGGGAAAGAACTGGA +
Preference number: 4 (lower is better)
Translates to: VLISLHSFHEEIRNPKSKLGSRR*SGERTG
Trigger: TCCAGTTCTTTCCCCTGAGCAGCGCCTGGAACCTAA...TTTGCTCTTTGGATTCCGGATCTCTTCATGAAACGAGTGGAGACTAATCAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
CDS-3UTR GCA 90 bp TTCGATTACAGGAATCTTTGTAGAGCATATACGGGGTGCCTGTTTCCGTCTGAGAGATCTCTGGCACGCTaGTCTTCCTTTCCTGTGTTC +
Preference number: 4 (lower is better)
Translates to: FDYRNLCRAYTGCLFPSERSLAR*SSFPVF
Trigger: GAACACAGGAAAGGAAGAGCAGCGTGCCAGAGATCT...CTCAGACGGAAACAGGCACCCCGTATATGCTCTACAAAGATTCCTGTAATCGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp GAATCCAAAGAGCAAAGAAAAGATCTCTGGCACGCTGCTCTTCCTTTCCTGTGTAGATCTCTGGCACGCTaGTCTTCCTTTCCTGTGTTC +
Preference number: 4 (lower is better)
Translates to: ESKEQRKDLWHAALPFLCRSLAR*SSFPVF
Trigger: GAACACAGGAAAGGAAGAGCAGCGTGCCAGAGATCT...ACACAGGAAAGGAAGAGCAGCGTGCCAGAGATCTTTTCTTTGCTCTTTGGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp GTTGGTACCAGCATTGAAGAGAGTGGGCGAAGCATGAGTAAACCACCTCTCAGAATGGTTCCCAGGTTCTaGTGGTTGCTCTTTCGATTA +
Preference number: 4 (lower is better)
Translates to: VGTSIEESGRSMSKPPLRMVPRF*WLLFRL
Trigger: TAATCGAAAGAGCAACCAGCAGAACCTGGGAACCAT...TCTGAGAGGTGGTTTACTCATGCTTCGCCCACTCTCTTCAATGCTGGTACCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
CDS-3UTR GCA 90 bp TACCACCTCAAGCAAACCCACTATACCTATCTATGCTCAAGAAGTAGTTTGGCTGTTTCGTATGGGCCCTaGTCCTTGGCAAGGTCACAG +
Preference number: 4 (lower is better)
Translates to: YHLKQTHYTYLCSRSSLAVSYGP*SLARSQ
Trigger: CTGTGACCTTGCCAAGGAGCAGGGCCCATACGAAAC...AGCCAAACTACTTCTTGAGCATAGATAGGTATAGTGGGTTTGCTTGAGGTGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp CTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTAGAGCACACCATGGCTaGTGTGTTCCTCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LCSRSSLATEDMLVSSKSRAHHG*CVPLLL
Trigger: GAGAAGGAGAGGAACACAGCAGCCATGGTGTGCTCT...AGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR GCA 90 bp GACGCTTGTTCCCACCTTGATCCACATATCGAGCTGTGTTGTTATATACTCTCAAGAGCACACCATGGCTaGTGTGTTCCTCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: DACSHLDPHIELCCYILSRAHHG*CVPLLL
Trigger: GAGAAGGAGAGGAACACAGCAGCCATGGTGTGCTCT...TGAGAGTATATAACAACACAGCTCGATATGTGGATCAAGGTGGGAACAAGCGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
CDS-3UTR GCA 90 bp CTTCTCATGAGTTATCACTCAGTTTTGCTTCTAGAGACCCACCAGTCAAAGCAGAGAGCACACCATGGCTaGTGTGTTCCTCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LLMSYHSVLLLETHQSKQRAHHG*CVPLLL
Trigger: GAGAAGGAGAGGAACACAGCAGCCATGGTGTGCTCT...CTGCTTTGACTGGTGGGTCTCTAGAAGCAAAACTGAGTGATAACTCATGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp GGAATCCAAAGAGCAAAGAAAAGATCTCTGGCACGCTGCTCTTCCTTTCCTGTGATTACTCCTTTTGCCTaGAACAGGGTCCAGCAAAGC +
Preference number: 4 (lower is better)
Translates to: GIQRAKKRSLARCSSFPVITPFA*NRVQQS
Trigger: GCTTTGCTGGACCCTGTTGCAGGCAAAAGGAGTAAT...CACAGGAAAGGAAGAGCAGCGTGCCAGAGATCTTTTCTTTGCTCTTTGGATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp CATGAAGAGATCCGGAATCCAAAGAGCAAAGAAAAGATCTCTGGCACGCTGCTCATTACTCCTTTTGCCTaGAACAGGGTCCAGCAAAGC +
Preference number: 4 (lower is better)
Translates to: HEEIRNPKSKEKISGTLLITPFA*NRVQQS
Trigger: GCTTTGCTGGACCCTGTTGCAGGCAAAAGGAGTAAT...GAGCAGCGTGCCAGAGATCTTTTCTTTGCTCTTTGGATTCCGGATCTCTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp GGTGCCTGTTTCCGTCTGAGACTCAATGATGGCATACCAAAGCTGCTGAGCTTTTTGACTTGGCCACCATaGGAGAGTGTTTGCCATTAT +
Preference number: 4 (lower is better)
Translates to: GACFRLRLNDGIPKLLSFLTWPP*ESVCHY
Trigger: ATAATGGCAAACACTCTCCCATGGTGGCCAAGTCAA...AAAGCTCAGCAGCTTTGGTATGCCATCATTGAGTCTCAGACGGAAACAGGCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CCA 90 bp CAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACCTATCTATGCTTGACTTGGCCACCATaGGAGAGTGTTTGCCATTAT +
Preference number: 4 (lower is better)
Translates to: QGPAKPYHLKQTHYTYLCLTWPP*ESVCHY
Trigger: ATAATGGCAAACACTCTCCCATGGTGGCCAAGTCAA...GCATAGATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CCA 90 bp TTTAAATCAATTACTCCTTTTGCCTGCAACAGGGTCCAGCAAAGCCTTACCACCCTCATAGGTTTCGTATaGGCCCTGCTCCTTGGCAAG +
Preference number: 4 (lower is better)
Translates to: FKSITPFACNRVQQSLTTLIGFV*ALLLGK
Trigger: CTTGCCAAGGAGCAGGGCCCATACGAAACCTATGAG...GGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCAAAAGGAGTAATTGATTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp TATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTGGTTGGTACCAGCATTaGAGAGAGTGGGCGAAGCAT +
Preference number: 4 (lower is better)
Translates to: YAQEVVWLLKTCWSLPSLGWYQH*REWAKH
Trigger: ATGCTTCGCCCACTCTCTTCAATGCTGGTACCAACC...AAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR TCA 90 bp TATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGCGCTTGTTCCCACCTTaGTCCACATATCGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: YLCSRSSLATEDMLVSSKRLFPP*STYRAV
Trigger: CACAGCTCGATATGTGGATCAAGGTGGGAACAAGCG...CTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000534285.5
CDS-3UTR TCA 90 bp AAACAGCAACCTCATCTTTGCTGGTGTACTCCACTATTTCTGTGCACAGGTTGCGCATACCAAAGCTGCTaGGCTTTTACAACTTTGCGG +
Preference number: 4 (lower is better)
Translates to: KQQPHLCWCTPLFLCTGCAYQSC*AFTTLR
Trigger: CCGCAAAGTTGTAAAAGCTCAGCAGCTTTGGTATGC...GCAACCTGTGCACAGAAATAGTGGAGTACACCAGCAAAGATGAGGTTGCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp GCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTTCCGCATACCAAAGCTGCTaGGCTTTTACAACTTTGCGG +
Preference number: 4 (lower is better)
Translates to: AQEVVWLLKTCWSLPSLSAYQSC*AFTTLR
Trigger: CCGCAAAGTTGTAAAAGCTCAGCAGCTTTGGTATGC...GGAAAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR TCA 90 bp CAGGTTCTGCTGGTTGCTCTTTCGATTACAGGAATCTTTGTAGAGCATATACGGCCGTCTGAGACTCAATaGTGGCATACCAAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: QVLLVALSITGIFVEHIRPSETQ*WHTKAA
Trigger: AGCAGCTTTGGTATGCCATCATTGAGTCTCAGACGG...CCGTATATGCTCTACAAAGATTCCTGTAATCGAAAGAGCAACCAGCAGAACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp CTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTGTGCCTGTTTCCGTCTaGGACTCAATGATGGCATAC +
Preference number: 4 (lower is better)
Translates to: LCSRSSLATEDMLVSSKSVPVSV*DSMMAY
Trigger: GTATGCCATCATTGAGTCTCAGACGGAAACAGGCAC...AGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR TCA 90 bp CACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAAAGATCTCTGGCACAGGTTGCTGCATTTaGTGGTTCCCAGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: HSFHEEIRNPKSKEKISGTGCCI*WFPGSA
Trigger: AGCAGAACCTGGGAACCATCAAATGCAGCAACCTGT...GCCAGAGATCTTTTCTTTGCTCTTTGGATTCCGGATCTCTTCATGAAACGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp TGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTTCACAGGTTGCTGCATTTaGTGGTTCCCAGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: CSRSSLATEDMLVSSKSFTGCCI*WFPGSA
Trigger: AGCAGAACCTGGGAACCATCAAATGCAGCAACCTGT...GAAAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR TCA 90 bp TTACTCCTTTTGCCTGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACATGTGTGTTCTGATGTaGCATACATATTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: LLLLPATGSSKALPPQANMCVLM*HTYSGP
Trigger: TGGCCCTGAATATGTATGTCACATCAGAACACACAT...GTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCAAAAGGAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp GCCAAATTACAAACAGCAACCTCATCTTTGCTGGTGTACTCCACTATTTCTGTGTTATTCCCCAGGATCTaGGCAGTGGAAGCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: AKLQTATSSLLVYSTISVLFPRI*AVEAVG
Trigger: GCCTACAGCTTCCACTGCTCAGATCCTGGGGAATAA...CACAGAAATAGTGGAGTACACCAGCAAAGATGAGGTTGCTGTTTGTAATTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp TCTCATGAGTTATCACTCAGTTTTGCTTCTAGAGACCCACCAGTCAAAGCAGTATTATTCCCCAGGATCTaGGCAGTGGAAGCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: SHELSLSFASRDPPVKAVLFPRI*AVEAVG
Trigger: GCCTACAGCTTCCACTGCTCAGATCCTGGGGAATAA...TACTGCTTTGACTGGTGGGTCTCTAGAAGCAAAACTGAGTGATAACTCATGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp TTGCTGGTGTACTCCACTATTTCTGTGCACAGGTTGCTGCATTTGATGGTTCCCTCTCAGCTGCCATCTTaGGAACAGTTTTCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: LLVYSTISVHRLLHLMVPSQLPS*EQFSER
Trigger: TCTCTCAGAAAACTGTTCTCAAGATGGCAGCTGAGA...GGGAACCATCAAATGCAGCAACCTGTGCACAGAAATAGTGGAGTACACCAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp AAGCCTTACCACCTCAAGCAAACCCACTATACCTATCTATGCTCAAGAAGTAGTGGCTGCAATGAGCTGTaGTTATGCCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: KPYHLKQTHYTYLCSRSSGCNEL*LCHCTP
Trigger: TGGAGTGCAGTGGCATAATCACAGCTCATTGCAGCC...ACTACTTCTTGAGCATAGATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532170.5
CDS-3UTR TCA 90 bp TCCTTGAGAACCTTCCAGTCCCATAGGTCTGTAGGAGTAACATTCCACATATCAACTTTCATGGTGATCTaGGCCTGTGATCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: SLRTFQSHRSVGVTFHISTFMVI*ACDPSY
Trigger: GTAGCTGGGATCACAGGCTCAGATCACCATGAAAGT...TGATATGTGGAATGTTACTCCTACAGACCTATGGGACTGGAAGGTTCTCAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532170.5
CDS-3UTR TCA 90 bp ATATTCAGGGCCAGGGAAGCCAAATTACAAACAGCAACCTCATCTTTGCTGGTGGGATTACTTTCATGGTaGTCTGAGCCTGTGATCCCA +
Preference number: 4 (lower is better)
Translates to: IFRAREAKLQTATSSLLVGLLSW*SEPVIP
Trigger: TGGGATCACAGGCTCAGATCACCATGAAAGTAATCC...CACCAGCAAAGATGAGGTTGCTGTTTGTAATTTGGCTTCCCTGGCCCTGAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532170.5
CDS-3UTR GCA 90 bp AAGCCTTACCACCTCAAGCAAACCCACTATACCTATCTATGCTCAAGAAGTAGTTTAGGTTCCAGGCGCTaGTCAGGGGAAAGAACTGGA +
Preference number: 4 (lower is better)
Translates to: KPYHLKQTHYTYLCSRSSLGSRR*SGERTG
Trigger: TCCAGTTCTTTCCCCTGAGCAGCGCCTGGAACCTAA...ACTACTTCTTGAGCATAGATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR GCA 90 bp CTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTCAGGTAAATAGCAAATaGCCCAGGACGCTTGTTCCC +
Preference number: 4 (lower is better)
Translates to: LCSRSSLATEDMLVSSKSQVNSK*PRTLVP
Trigger: GGGAACAAGCGTCCTGGGGCATTTGCTATTTACCTG...AGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000534285.5
CDS-3UTR GCA 90 bp TGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTTCAGATCTCTGGCACGCTaGTCTTCCTTTCCTGTGTTC +
Preference number: 4 (lower is better)
Translates to: CSRSSLATEDMLVSSKSFRSLAR*SSFPVF
Trigger: GAACACAGGAAAGGAAGAGCAGCGTGCCAGAGATCT...GAAAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR GCA 90 bp GCCAGACCTTGTACCCCAATTCCAATGGGGCGATGGCGTTTATTTGATAGGCATGAGCTTTTACAACTTTaGGGACACGACCTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: ARPCTPIPMGRWRLFDRHELLQL*GHDLVS
Trigger: AGAAACAAGGTCGTGTCCGCAAAGTTGTAAAAGCTC...ATGCCTATCAAATAAACGCCATCGCCCCATTGGAATTGGGGTACAAGGTCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp TGTTTCCGTCTGAGACTCAATGATGGCATACCAAAGCTGCTGAGCTTTTACAACAGAGCATATACGGGGTaGCTGTTTCCGTCTGAGACT +
Preference number: 4 (lower is better)
Translates to: CFRLRLNDGIPKLLSFYNRAYTG*LFPSET
Trigger: AGTCTCAGACGGAAACAGGCACCCCGTATATGCTCT...GTTGTAAAAGCTCAGCAGCTTTGGTATGCCATCATTGAGTCTCAGACGGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp CTCATCTTTGCTGGTGTACTCCACTATTTCTGTGCACAGGTTGCTGCATTTGATAGAGCATATACGGGGTaGCTGTTTCCGTCTGAGACT +
Preference number: 4 (lower is better)
Translates to: LIFAGVLHYFCAQVAAFDRAYTG*LFPSET
Trigger: AGTCTCAGACGGAAACAGGCACCCCGTATATGCTCT...ATCAAATGCAGCAACCTGTGCACAGAAATAGTGGAGTACACCAGCAAAGATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp TTTAAATCAATTACTCCTTTTGCCTGCAACAGGGTCCAGCAAAGCCTTACCACCAGAGCATATACGGGGTaGCTGTTTCCGTCTGAGACT +
Preference number: 4 (lower is better)
Translates to: FKSITPFACNRVQQSLTTRAYTG*LFPSET
Trigger: AGTCTCAGACGGAAACAGGCACCCCGTATATGCTCT...GGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCAAAAGGAGTAATTGATTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp ACCAGGACACTCATTTGGACACATCAAAGACCAGTCCTGATTAGTCTCCACTCGCAGGATAAAAGCATCTaGCAGACCTTGTACCCCAAT +
Preference number: 4 (lower is better)
Translates to: TRTLIWTHQRPVLISLHSQDKSI*QTLYPN
Trigger: ATTGGGGTACAAGGTCTGGCAGATGCTTTTATCCTG...CGAGTGGAGACTAATCAGGACTGGTCTTTGATGTGTCCAAATGAGTGTCCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp TATCCAATGTTGACTTGGCCACCATGGGAGAGTGTTTGCCATTATGTGGATTTAAGAGCACACCATGGCTaGTGTGTTCCTCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: YPMLTWPPWESVCHYVDLRAHHG*CVPLLL
Trigger: GAGAAGGAGAGGAACACAGCAGCCATGGTGTGCTCT...TAAATCCACATAATGGCAAACACTCTCCCATGGTGGCCAAGTCAACATTGGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
CDS-3UTR GCA 90 bp TACAGGAATCTTTGTAGAGCATATACGGGGTGCCTGTTTCCGTCTGAGACTCAACAGGTAAATAGCAAATaGCCCAGGACGCTAGTGGTA +
Preference number: 4 (lower is better)
Translates to: YRNLCRAYTGCLFPSETQQVNSK*PRTLVV
Trigger: TACCACTAGCGTCCTGGGGCATTTGCTATTTACCTG...TTGAGTCTCAGACGGAAACAGGCACCCCGTATATGCTCTACAAAGATTCCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528442.5
CDS-3UTR CCA 90 bp CAGTACTTTAAATCAATTACTCCTTTTGCCTGCAACAGGGTCCAGCAAAGCCTTCTCAGGGGAAAGAACTaGAGTTGGAGCCAGACAGCA +
Preference number: 4 (lower is better)
Translates to: QYFKSITPFACNRVQQSLLRGKN*SWSQTA
Trigger: TGCTGTCTGGCTCCAACTCCAGTTCTTTCCCCTGAG...AAGGCTTTGCTGGACCCTGTTGCAGGCAAAAGGAGTAATTGATTTAAAGTACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CCA 90 bp ATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTCAGGGGAAAGAACTaGAGTTGGAGCCAGACAGCA +
Preference number: 4 (lower is better)
Translates to: IYAQEVVWLLKTCWSLPSLRGKN*SWSQTA
Trigger: TGCTGTCTGGCTCCAACTCCAGTTCTTTCCCCTGAG...ACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CCA 90 bp TTACTCCTTTTGCCTGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTGTACAAGCCTTaGATTACTTTCATGGTGATC +
Preference number: 4 (lower is better)
Translates to: LLLLPATGSSKALPPQANPLYKP*ITFMVI
Trigger: GATCACCATGAAAGTAATCCAAGGCTTGTACAGTGG...GTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCAAAAGGAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300738.10
ENST00000532170.5
CDS-3UTR CCA 90 bp GGTGCCTGTTTCCGTCTGAGACTCAATGATGGCATACCAAAGCTGCTGAGCTTTCCACTGTACAAGCCTTaGATTACTTTCATGGTGATC +
Preference number: 4 (lower is better)
Translates to: GACFRLRLNDGIPKLLSFPLYKP*ITFMVI
Trigger: GATCACCATGAAAGTAATCCAAGGCTTGTACAGTGG...AAAGCTCAGCAGCTTTGGTATGCCATCATTGAGTCTCAGACGGAAACAGGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532170.5
CDS-3UTR CCA 90 bp GCTGCATTTGATGGTTCCCAGGTTCTGCTGGTTGCTCTTTCGATTACAGGAATCTATCCAATGTTGACTTaGCCACCATGGGAGAGTGTT +
Preference number: 4 (lower is better)
Translates to: AAFDGSQVLLVALSITGIYPMLT*PPWESV
Trigger: AACACTCTCCCATGGTGGCCAAGTCAACATTGGATA...GATTCCTGTAATCGAAAGAGCAACCAGCAGAACCTGGGAACCATCAAATGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CCA 90 bp CTGCTGGTTGCTCTTTCGATTACAGGAATCTTTGTAGAGCATATACGGGGTGCCTATCCAATGTTGACTTaGCCACCATGGGAGAGTGTT +
Preference number: 4 (lower is better)
Translates to: LLVALSITGIFVEHIRGAYPMLT*PPWESV
Trigger: AACACTCTCCCATGGTGGCCAAGTCAACATTGGATA...GGCACCCCGTATATGCTCTACAAAGATTCCTGTAATCGAAAGAGCAACCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CCA 90 bp TTGCCTGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACCATCAACATATGTTGTaGTCTTTCAGCCACTTTTCC +
Preference number: 4 (lower is better)
Translates to: LPATGSSKALPPQANPLYHQHML*SFSHFS
Trigger: GGAAAAGTGGCTGAAAGACCACAACATATGTTGATG...GTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CCA 90 bp ACATGCTGGTCTCTTCCAAGTCTTTCCTCAGGATCCACACATCAGACATTCATCGTTCCCAGGTTCTGCTaGTTGCTCTTTCGATTACAG +
Preference number: 4 (lower is better)
Translates to: TCWSLPSLSSGSTHQTFIVPRFC*LLFRLQ
Trigger: CTGTAATCGAAAGAGCAACCAGCAGAACCTGGGAAC...GATGAATGTCTGATGTGTGGATCCTGAGGAAAGACTTGGAAGAGACCAGCATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp GAATCCAAAGAGCAAAGAAAAGATCTCTGGCACGCTGCTCTTCCTTTCCTGTGTGTTCCCAGGTTCTGCTaGTTGCTCTTTCGATTACAG +
Preference number: 4 (lower is better)
Translates to: ESKEQRKDLWHAALPFLCVPRFC*LLFRLQ
Trigger: CTGTAATCGAAAGAGCAACCAGCAGAACCTGGGAAC...ACACAGGAAAGGAAGAGCAGCGTGCCAGAGATCTTTTCTTTGCTCTTTGGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp TTACTCCTTTTGCCTGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACATTCCAATGGGGCGATaGCGTTTATTTGATAGGCAT +
Preference number: 4 (lower is better)
Translates to: LLLLPATGSSKALPPQANIPMGR*RLFDRH
Trigger: ATGCCTATCAAATAAACGCCATCGCCCCATTGGAAT...GTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCAAAAGGAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp GACATGCTGGTCTCTTCCAAGTCTTTCCTCAGGATCCACACATCAGACATTCATGTACCCCAATTCCAATaGGGCGATGGCGTTTATTTG +
Preference number: 4 (lower is better)
Translates to: DMLVSSKSFLRIHTSDIHVPQFQ*GDGVYL
Trigger: CAAATAAACGCCATCGCCCCATTGGAATTGGGGTAC...ATGAATGTCTGATGTGTGGATCCTGAGGAAAGACTTGGAAGAGACCAGCATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp TGCTCTTTCGATTACAGGAATCTTTGTAGAGCATATACGGGGTGCCTGTTTCCGGTACCCCAATTCCAATaGGGCGATGGCGTTTATTTG +
Preference number: 4 (lower is better)
Translates to: CSFDYRNLCRAYTGCLFPVPQFQ*GDGVYL
Trigger: CAAATAAACGCCATCGCCCCATTGGAATTGGGGTAC...CGGAAACAGGCACCCCGTATATGCTCTACAAAGATTCCTGTAATCGAAAGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp ATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTCATAGGTTTCGTATaGGCCCTGCTCCTTGGCAAG +
Preference number: 4 (lower is better)
Translates to: IYAQEVVWLLKTCWSLPSLIGFV*ALLLGK
Trigger: CTTGCCAAGGAGCAGGGCCCATACGAAACCTATGAG...ACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR CCA 90 bp TATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGCTCATAGGTTTCGTATaGGCCCTGCTCCTTGGCAAG +
Preference number: 4 (lower is better)
Translates to: YLCSRSSLATEDMLVSSKLIGFV*ALLLGK
Trigger: CTTGCCAAGGAGCAGGGCCCATACGAAACCTATGAG...CTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR CCA 90 bp TCTCATGAGTTATCACTCAGTTTTGCTTCTAGAGACCCACCAGTCAAAGCAGTACCAAAGAGCACACCATaGCTGCTGTGTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: SHELSLSFASRDPPVKAVPKSTP*LLCSSP
Trigger: AGGAGAGGAACACAGCAGCCATGGTGTGCTCTTTGG...TACTGCTTTGACTGGTGGGTCTCTAGAAGCAAAACTGAGTGATAACTCATGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp AGTTTTGCTTCTAGAGACCCACCAGTCAAAGCAGTAAAACTAAATCTCCTTAACATCGCAGCTAGTGGCTaGGGCTCTGAAGGATCCAAG +
Preference number: 4 (lower is better)
Translates to: SFASRDPPVKAVKLNLLNIAASG*GSEGSK
Trigger: CTTGGATCCTTCAGAGCCTCAGCCACTAGCTGCGAT...GTTAAGGAGATTTAGTTTTACTGCTTTGACTGGTGGGTCTCTAGAAGCAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR TCA 90 bp TCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACCTATCTATGCTCAAGAACAATATCCAATGTTaGCTTGGCCACCATGGGAGA +
Preference number: 4 (lower is better)
Translates to: SSKALPPQANPLYLSMLKNNIQC*LGHHGR
Trigger: TCTCCCATGGTGGCCAAGTCAACATTGGATATTGTT...CTTGAGCATAGATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR TCA 90 bp TTCCGTCTGAGACTCAATGATGGCATACCAAAGCTGCTGAGCTTTTACAACTTTAGAGTGGGCGAAGCATaGGTAAACCACCTCTCAGAA +
Preference number: 4 (lower is better)
Translates to: FRLRLNDGIPKLLSFYNFRVGEA*VNHLSE
Trigger: TTCTGAGAGGTGGTTTACTCATGCTTCGCCCACTCT...AAAGTTGTAAAAGCTCAGCAGCTTTGGTATGCCATCATTGAGTCTCAGACGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
CDS-3UTR TCA 90 bp ATACATATTCAGGGCCAGGGAAGCCAAATTACAAACAGCAACCTCATCTTTGCTAGAGTGGGCGAAGCATaGGTAAACCACCTCTCAGAA +
Preference number: 4 (lower is better)
Translates to: IHIQGQGSQITNSNLIFARVGEA*VNHLSE
Trigger: TTCTGAGAGGTGGTTTACTCATGCTTCGCCCACTCT...AGCAAAGATGAGGTTGCTGTTTGTAATTTGGCTTCCCTGGCCCTGAATATGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
CDS-3UTR TCA 90 bp GAATCCAAAGAGCAAAGAAAAGATCTCTGGCACGCTGCTCTTCCTTTCCTGTGTATCAAAGACCAGTCCTaGTTAGTCTCCACTCGTTTC +
Preference number: 4 (lower is better)
Translates to: ESKEQRKDLWHAALPFLCIKDQS*LVSTRF
Trigger: GAAACGAGTGGAGACTAATCAGGACTGGTCTTTGAT...ACACAGGAAAGGAAGAGCAGCGTGCCAGAGATCTTTTCTTTGCTCTTTGGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp ATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCCGTCTGAGACTCAATaGTGGCATACCAAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: IYAQEVVWLLKTCWSLPSPSETQ*WHTKAA
Trigger: AGCAGCTTTGGTATGCCATCATTGAGTCTCAGACGG...ACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR TCA 90 bp TATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTGTGCCTGTTTCCGTCTaGGACTCAATGATGGCATAC +
Preference number: 4 (lower is better)
Translates to: YAQEVVWLLKTCWSLPSLVPVSV*DSMMAY
Trigger: GTATGCCATCATTGAGTCTCAGACGGAAACAGGCAC...AAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR TCA 90 bp ATACATATTCAGGGCCAGGGAAGCCAAATTACAAACAGCAACCTCATCTTTGCTGTGCCTGTTTCCGTCTaGGACTCAATGATGGCATAC +
Preference number: 4 (lower is better)
Translates to: IHIQGQGSQITNSNLIFAVPVSV*DSMMAY
Trigger: GTATGCCATCATTGAGTCTCAGACGGAAACAGGCAC...AGCAAAGATGAGGTTGCTGTTTGTAATTTGGCTTCCCTGGCCCTGAATATGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp GTCTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAAAGATCTGTGCCTGTTTCCGTCTaGGACTCAATGATGGCATAC +
Preference number: 4 (lower is better)
Translates to: VSTRFMKRSGIQRAKKRSVPVSV*DSMMAY
Trigger: GTATGCCATCATTGAGTCTCAGACGGAAACAGGCAC...AGATCTTTTCTTTGCTCTTTGGATTCCGGATCTCTTCATGAAACGAGTGGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp TATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGACAGGTTGCTGCATTTaGTGGTTCCCAGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: YLCSRSSLATEDMLVSSKTGCCI*WFPGSA
Trigger: AGCAGAACCTGGGAACCATCAAATGCAGCAACCTGT...CTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR TCA 90 bp GAATCCAAAGAGCAAAGAAAAGATCTCTGGCACGCTGCTCTTCCTTTCCTGTGTTTGCAATCTTCTCCTTaGGAACCTTCCAGTCCCATA +
Preference number: 4 (lower is better)
Translates to: ESKEQRKDLWHAALPFLCLQSSP*EPSSPI
Trigger: TATGGGACTGGAAGGTTCTCAAGGAGAAGATTGCAA...ACACAGGAAAGGAAGAGCAGCGTGCCAGAGATCTTTTCTTTGCTCTTTGGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp CAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACCTATCTATGCTTGAGAACAGTTTTCTaGGAGATTTCCCACACAGTT +
Preference number: 4 (lower is better)
Translates to: QGPAKPYHLKQTHYTYLCLRTVF*EISHTV
Trigger: AACTGTGTGGGAAATCTCTCAGAAAACTGTTCTCAA...GCATAGATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp TTTGTAGAGCATATACGGGGTGCCTGTTTCCGTCTGAGACTCAATGATGGCATAATTGGCTTTGATCAATaGAAGCACCTCTCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: FVEHIRGACFRLRLNDGIIGFDQ*KHLSQL
Trigger: CAGCTGAGAGAGGTGCTTTCATTGATCAAAGCCAAT...TATGCCATCATTGAGTCTCAGACGGAAACAGGCACCCCGTATATGCTCTACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp TTTTGCCTGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATCCATGGGAGAGTGTTTaGCATTATGTGGATTTATGT +
Preference number: 4 (lower is better)
Translates to: FCLQQGPAKPYHLKQTHYPWESV*HYVDLC
Trigger: ACATAAATCCACATAATGGCAAACACTCTCCCATGG...ATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR GCA 90 bp ATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCAGGTAAATAGCAAATaGCCCAGGACGCTTGTTCCC +
Preference number: 4 (lower is better)
Translates to: IYAQEVVWLLKTCWSLPSQVNSK*PRTLVP
Trigger: GGGAACAAGCGTCCTGGGGCATTTGCTATTTACCTG...ACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000534285.5
CDS-3UTR GCA 90 bp TATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGAGAGCATATACGGGGTaGCTGTTTCCGTCTGAGACT +
Preference number: 4 (lower is better)
Translates to: YLCSRSSLATEDMLVSSKRAYTG*LFPSET
Trigger: AGTCTCAGACGGAAACAGGCACCCCGTATATGCTCT...CTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR GCA 90 bp TACAGGAATCTTTGTAGAGCATATACGGGGTGCCTGTTTCCGTCTGAGACTCAACCAGGTTCTGCTGGTTaGTCTTTCGATTACAGGAAT +
Preference number: 4 (lower is better)
Translates to: YRNLCRAYTGCLFPSETQPGSAG*SFDYRN
Trigger: ATTCCTGTAATCGAAAGAGCAACCAGCAGAACCTGG...TTGAGTCTCAGACGGAAACAGGCACCCCGTATATGCTCTACAAAGATTCCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp ATATTCAGGGCCAGGGAAGCCAAATTACAAACAGCAACCTCATCTTTGCTGGTGCCAGGTTCTGCTGGTTaGTCTTTCGATTACAGGAAT +
Preference number: 4 (lower is better)
Translates to: IFRAREAKLQTATSSLLVPGSAG*SFDYRN
Trigger: ATTCCTGTAATCGAAAGAGCAACCAGCAGAACCTGG...CACCAGCAAAGATGAGGTTGCTGTTTGTAATTTGGCTTCCCTGGCCCTGAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp GCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTTCCATGGTTCCCAGGTTCTaGTGGTTGCTCTTTCGATTA +
Preference number: 4 (lower is better)
Translates to: AQEVVWLLKTCWSLPSLSMVPRF*WLLFRL
Trigger: TAATCGAAAGAGCAACCAGCAGAACCTGGGAACCAT...GGAAAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR CCA 90 bp GCTAAAGGGGTGATGAAACCTTACTTAACCACTCCCTGTATGCAAGATGACTTAAACATGACTCGTTCTTaGCGGCCATCTCGCTTGATC +
Preference number: 4 (lower is better)
Translates to: AKGVMKPYLTTPCMQDDLNMTRS*RPSRLI
Trigger: GATCAAGCGAGATGGCCGCCAAGAACGAGTCATGTT...TAAGTCATCTTGCATACAGGGAGTGGTTAAGTAAGGTTTCATCACCCCTTTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CCA 90 bp GTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACCTATCTATGCTCAATTGACTTGGCCACCATaGGAGAGTGTTTGCCATTAT +
Preference number: 4 (lower is better)
Translates to: VQQSLTTSSKPTIPIYAQLTWPP*ESVCHY
Trigger: ATAATGGCAAACACTCTCCCATGGTGGCCAAGTCAA...TTGAGCATAGATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CCA 90 bp TTTTGCCTGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATCATCAACATATGTTGTaGTCTTTCAGCCACTTTTCC +
Preference number: 4 (lower is better)
Translates to: FCLQQGPAKPYHLKQTHYHQHML*SFSHFS
Trigger: GGAAAAGTGGCTGAAAGACCACAACATATGTTGATG...ATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CCA 90 bp CTCATCTTTGCTGGTGTACTCCACTATTTCTGTGCACAGGTTGCTGCATTTGATACAGCTAGAAAGTTGTaGGCGGTTGGTACCAGCATT +
Preference number: 4 (lower is better)
Translates to: LIFAGVLHYFCAQVAAFDTARKL*AVGTSI
Trigger: AATGCTGGTACCAACCGCCCACAACTTTCTAGCTGT...ATCAAATGCAGCAACCTGTGCACAGAAATAGTGGAGTACACCAGCAAAGATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CCA 90 bp TCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACCTATCTATGCTCAAGCAAAGAAAAGATCTCTaGCACGCTGCTCTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: SSKALPPQANPLYLSMLKQRKDL*HAALPF
Trigger: GAAAGGAAGAGCAGCGTGCCAGAGATCTTTTCTTTG...CTTGAGCATAGATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp CTTCTCATGAGTTATCACTCAGTTTTGCTTCTAGAGACCCACCAGTCAAAGCAGGTTCCCAGGTTCTGCTaGTTGCTCTTTCGATTACAG +
Preference number: 4 (lower is better)
Translates to: LLMSYHSVLLLETHQSKQVPRFC*LLFRLQ
Trigger: CTGTAATCGAAAGAGCAACCAGCAGAACCTGGGAAC...CTGCTTTGACTGGTGGGTCTCTAGAAGCAAAACTGAGTGATAACTCATGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp TCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAAAGATCTCTGGCACGGTTCCCAGGTTCTGCTaGTTGCTCTTTCGATTACAG +
Preference number: 4 (lower is better)
Translates to: SFHEEIRNPKSKEKISGTVPRFC*LLFRLQ
Trigger: CTGTAATCGAAAGAGCAACCAGCAGAACCTGGGAAC...CGTGCCAGAGATCTTTTCTTTGCTCTTTGGATTCCGGATCTCTTCATGAAACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp TGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTTCGTTCCCAGGTTCTGCTaGTTGCTCTTTCGATTACAG +
Preference number: 4 (lower is better)
Translates to: CSRSSLATEDMLVSSKSFVPRFC*LLFRLQ
Trigger: CTGTAATCGAAAGAGCAACCAGCAGAACCTGGGAAC...GAAAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR CCA 90 bp CTGCTGGTTGCTCTTTCGATTACAGGAATCTTTGTAGAGCATATACGGGGTGCCCAACCTCATCTTTGCTaGTGTACTCCACTATTTCTG +
Preference number: 4 (lower is better)
Translates to: LLVALSITGIFVEHIRGAQPHLC*CTPLFL
Trigger: CAGAAATAGTGGAGTACACCAGCAAAGATGAGGTTG...GGCACCCCGTATATGCTCTACAAAGATTCCTGTAATCGAAAGAGCAACCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp TGTTTCCGTCTGAGACTCAATGATGGCATACCAAAGCTGCTGAGCTTTTACAACGTACCCCAATTCCAATaGGGCGATGGCGTTTATTTG +
Preference number: 4 (lower is better)
Translates to: CFRLRLNDGIPKLLSFYNVPQFQ*GDGVYL
Trigger: CAAATAAACGCCATCGCCCCATTGGAATTGGGGTAC...GTTGTAAAAGCTCAGCAGCTTTGGTATGCCATCATTGAGTCTCAGACGGAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp TGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTTCGTACCCCAATTCCAATaGGGCGATGGCGTTTATTTG +
Preference number: 4 (lower is better)
Translates to: CSRSSLATEDMLVSSKSFVPQFQ*GDGVYL
Trigger: CAAATAAACGCCATCGCCCCATTGGAATTGGGGTAC...GAAAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR CCA 90 bp GAATCCAAAGAGCAAAGAAAAGATCTCTGGCACGCTGCTCTTCCTTTCCTGTGTGCTCAAGAAGTAGTTTaGCTACTGAAGACATGCTGG +
Preference number: 4 (lower is better)
Translates to: ESKEQRKDLWHAALPFLCAQEVV*LLKTCW
Trigger: CCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGC...ACACAGGAAAGGAAGAGCAGCGTGCCAGAGATCTTTTCTTTGCTCTTTGGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR CAA 72 bp TCTTCCATCACATCACTGAACACTTTCTTTGTTTCTTaGTGCAAGTTAGAGACAGCGATCCTGGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: SSITSLNTFFVS*CKLETAILAAR
Trigger: CCTGGCAGCCAGGATCGCTGTCTCTAACTTGCACAAAGAAACAAAGAAAGTGTTCAGTGATGTGATGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532170.5
CDS-3UTR TCA 90 bp GCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTTCCGGATTACTTTCATGGTaGTCTGAGCAGGATCAACAA +
Preference number: 4 (lower is better)
Translates to: AQEVVWLLKTCWSLPSLSGLLSW*SEQDQQ
Trigger: TTGTTGATCCTGCTCAGATCACCATGAAAGTAATCC...GGAAAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300738.10
CDS-3UTR TCA 90 bp TTTAAATCAATTACTCCTTTTGCCTGCAACAGGGTCCAGCAAAGCCTTACCACCTCTCCACTCGTTTCATaGAGAGATCCGGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: FKSITPFACNRVQQSLTTSPLVS*RDPESK
Trigger: TTTGGATTCCGGATCTCTTCATGAAACGAGTGGAGA...GGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCAAAAGGAGTAATTGATTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp TGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTTCATCAAAGACCAGTCCTaGTTAGTCTCCACTCGTTTC +
Preference number: 4 (lower is better)
Translates to: CSRSSLATEDMLVSSKSFIKDQS*LVSTRF
Trigger: GAAACGAGTGGAGACTAATCAGGACTGGTCTTTGAT...GAAAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR TCA 90 bp TCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAAAGATCTCTGGCACGATCAAAGACCAGTCCTaGTTAGTCTCCACTCGTTTC +
Preference number: 4 (lower is better)
Translates to: SFHEEIRNPKSKEKISGTIKDQS*LVSTRF
Trigger: GAAACGAGTGGAGACTAATCAGGACTGGTCTTTGAT...CGTGCCAGAGATCTTTTCTTTGCTCTTTGGATTCCGGATCTCTTCATGAAACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp AGTCTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAAAGATCGCATACCAAAGCTGCTaGGCTTTTACAACTTTGCGG +
Preference number: 4 (lower is better)
Translates to: SLHSFHEEIRNPKSKEKIAYQSC*AFTTLR
Trigger: CCGCAAAGTTGTAAAAGCTCAGCAGCTTTGGTATGC...GATCTTTTCTTTGCTCTTTGGATTCCGGATCTCTTCATGAAACGAGTGGAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp GTCTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAAAGATCTGCATACCAAAGCTGCTaGGCTTTTACAACTTTGCGG +
Preference number: 4 (lower is better)
Translates to: VSTRFMKRSGIQRAKKRSAYQSC*AFTTLR
Trigger: CCGCAAAGTTGTAAAAGCTCAGCAGCTTTGGTATGC...AGATCTTTTCTTTGCTCTTTGGATTCCGGATCTCTTCATGAAACGAGTGGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp ACCAGGACACTCATTTGGACACATCAAAGACCAGTCCTGATTAGTCTCCACTCGGTCGTATGTGTGTTCTaGTGTGACATACATATTCAG +
Preference number: 4 (lower is better)
Translates to: TRTLIWTHQRPVLISLHSVVCVF*CDIHIQ
Trigger: CTGAATATGTATGTCACATCAGAACACACATACGAC...CGAGTGGAGACTAATCAGGACTGGTCTTTGATGTGTCCAAATGAGTGTCCTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp GTGACATACATATTCAGGGCCAGGGAAGCCAAATTACAAACAGCAACCTCATCTTTGCAATCTTCTCCTTaGGAACCTTCCAGTCCCATA +
Preference number: 4 (lower is better)
Translates to: VTYIFRAREAKLQTATSSLQSSP*EPSSPI
Trigger: TATGGGACTGGAAGGTTCTCAAGGAGAAGATTGCAA...AGATGAGGTTGCTGTTTGTAATTTGGCTTCCCTGGCCCTGAATATGTATGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp TGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTTCTTGCAATCTTCTCCTTaGGAACCTTCCAGTCCCATA +
Preference number: 4 (lower is better)
Translates to: CSRSSLATEDMLVSSKSFLQSSP*EPSSPI
Trigger: TATGGGACTGGAAGGTTCTCAAGGAGAAGATTGCAA...GAAAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR TCA 90 bp GCTGGTTGCTCTTTCGATTACAGGAATCTTTGTAGAGCATATACGGGGTGCCTGTTGAGAACAGTTTTCTaGGAGATTTCCCACACAGTT +
Preference number: 4 (lower is better)
Translates to: AGCSFDYRNLCRAYTGCLLRTVF*EISHTV
Trigger: AACTGTGTGGGAAATCTCTCAGAAAACTGTTCTCAA...CAGGCACCCCGTATATGCTCTACAAAGATTCCTGTAATCGAAAGAGCAACCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp TGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTTCTCTCAGCTGCCATCTTaGGAACAGTTTTCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: CSRSSLATEDMLVSSKSFSQLPS*EQFSER
Trigger: TCTCTCAGAAAACTGTTCTCAAGATGGCAGCTGAGA...GAAAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR TCA 90 bp CAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACCTATCTATGCTCAAGAAATTGGCTTTGATCAATaGAAGCACCTCTCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: QQSLTTSSKPTIPIYAQEIGFDQ*KHLSQL
Trigger: CAGCTGAGAGAGGTGCTTTCATTGATCAAAGCCAAT...TTCTTGAGCATAGATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp CAGATAAAGGTCCTATCAGTACTTCTCATGAGTTATCACTCAGTTTTGCTTCTAGACAGCGATCCTGGCTaGCAGGATAGCATAGTCAGG +
Preference number: 4 (lower is better)
Translates to: QIKVLSVLLMSYHSVLLLDSDPG*QDSIVR
Trigger: CCTGACTATGCTATCCTGGCAGCCAGGATCGCTGTC...TAGAAGCAAAACTGAGTGATAACTCATGAGAAGTACTGATAGGACCTTTATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300738.10
ENST00000532170.5
CDS-3UTR GCA 90 bp ACCAGGACACTCATTTGGACACATCAAAGACCAGTCCTGATTAGTCTCCACTCGCCATGGGAGAGTGTTTaGCATTATGTGGATTTATGT +
Preference number: 4 (lower is better)
Translates to: TRTLIWTHQRPVLISLHSPWESV*HYVDLC
Trigger: ACATAAATCCACATAATGGCAAACACTCTCCCATGG...CGAGTGGAGACTAATCAGGACTGGTCTTTGATGTGTCCAAATGAGTGTCCTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
CDS-3UTR GCA 90 bp TTGCCTGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACTTAGAGTGTCATAAATaGCTTCAATGCTGTCATCTT +
Preference number: 4 (lower is better)
Translates to: LPATGSSKALPPQANPLYLECHK*LQCCHL
Trigger: AAGATGACAGCATTGAAGGCATTTATGACACTCTAA...GTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp TACAGGAATCTTTGTAGAGCATATACGGGGTGCCTGTTTCCGTCTGAGACTCAAGAGCTTTTACAACTTTaGGGACACGACCTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: YRNLCRAYTGCLFPSETQELLQL*GHDLVS
Trigger: AGAAACAAGGTCGTGTCCGCAAAGTTGTAAAAGCTC...TTGAGTCTCAGACGGAAACAGGCACCCCGTATATGCTCTACAAAGATTCCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp GGTTGCTCTTTCGATTACAGGAATCTTTGTAGAGCATATACGGGGTGCCTGTTTCCAGGTTCTGCTGGTTaGTCTTTCGATTACAGGAAT +
Preference number: 4 (lower is better)
Translates to: GCSFDYRNLCRAYTGCLFPGSAG*SFDYRN
Trigger: ATTCCTGTAATCGAAAGAGCAACCAGCAGAACCTGG...AAACAGGCACCCCGTATATGCTCTACAAAGATTCCTGTAATCGAAAGAGCAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp AGGACACTCATTTGGACACATCAAAGACCAGTCCTGATTAGTCTCCACTCGTTTATGGTTCCCAGGTTCTaGTGGTTGCTCTTTCGATTA +
Preference number: 4 (lower is better)
Translates to: RTLIWTHQRPVLISLHSFMVPRF*WLLFRL
Trigger: TAATCGAAAGAGCAACCAGCAGAACCTGGGAACCAT...AAACGAGTGGAGACTAATCAGGACTGGTCTTTGATGTGTCCAAATGAGTGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp CCTATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCACAGGATAAAAGCATCTaGCAGACCTTGTACCCCAAT +
Preference number: 4 (lower is better)
Translates to: PIYAQEVVWLLKTCWSLPQDKSI*QTLYPN
Trigger: ATTGGGGTACAAGGTCTGGCAGATGCTTTTATCCTG...TGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR GCA 90 bp CTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTCAGGATAAAAGCATCTaGCAGACCTTGTACCCCAAT +
Preference number: 4 (lower is better)
Translates to: LCSRSSLATEDMLVSSKSQDKSI*QTLYPN
Trigger: ATTGGGGTACAAGGTCTGGCAGATGCTTTTATCCTG...AGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR GCA 90 bp GACGCTTGTTCCCACCTTGATCCACATATCGAGCTGTGTTGTTATATACTCTCAAGCACCTCTCTCAGCTaGCATCTTGAGAACAGTTTT +
Preference number: 4 (lower is better)
Translates to: DACSHLDPHIELCCYILSSTSLS*HLENSF
Trigger: AAAACTGTTCTCAAGATGGCAGCTGAGAGAGGTGCT...TGAGAGTATATAACAACACAGCTCGATATGTGGATCAAGGTGGGAACAAGCGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
CDS-3UTR GCA 90 bp CAGGTTCTGCTGGTTGCTCTTTCGATTACAGGAATCTTTGTAGAGCATATACGGAGCACCTCTCTCAGCTaGCATCTTGAGAACAGTTTT +
Preference number: 4 (lower is better)
Translates to: QVLLVALSITGIFVEHIRSTSLS*HLENSF
Trigger: AAAACTGTTCTCAAGATGGCAGCTGAGAGAGGTGCT...CCGTATATGCTCTACAAAGATTCCTGTAATCGAAAGAGCAACCAGCAGAACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp TTTGCCTGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACACTATACCTATCTATaGTCAAGAAGTAGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: FACNRVQQSLTTSSKPTIHYTYL*SRSSLA
Trigger: AGCCAAACTACTTCTTGAGCATAGATAGGTATAGTG...TATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp CTGATTAGTCTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAATTACTCCTTTTGCCTaGAACAGGGTCCAGCAAAGC +
Preference number: 4 (lower is better)
Translates to: LISLHSFHEEIRNPKSKEITPFA*NRVQQS
Trigger: GCTTTGCTGGACCCTGTTGCAGGCAAAAGGAGTAAT...TTCTTTGCTCTTTGGATTCCGGATCTCTTCATGAAACGAGTGGAGACTAATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp TTAAATCAATTACTCCTTTTGCCTGCAACAGGGTCCAGCAAAGCCTTACCACCTATCAATTACTCCTTTTaGCTGCAACAGGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LNQLLLLPATGSSKALPPINYSF*LQQGPA
Trigger: TGCTGGACCCTGTTGCAGGCAAAAGGAGTAATTGAT...AGGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCAAAAGGAGTAATTGATTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp AAAGAGCAAAGAAAAGATCTCTGGCACGCTGCTCTTCCTTTCCTGTGTTCTTCTATCAATTACTCCTTTTaGCTGCAACAGGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: KEQRKDLWHAALPFLCSSINYSF*LQQGPA
Trigger: TGCTGGACCCTGTTGCAGGCAAAAGGAGTAATTGAT...AGAAGAACACAGGAAAGGAAGAGCAGCGTGCCAGAGATCTTTTCTTTGCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp TTTAAATCAATTACTCCTTTTGCCTGCAACAGGGTCCAGCAAAGCCTTACCACCCAAAGAAAAGATCTCTaGCACGCTGCTCTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: FKSITPFACNRVQQSLTTQRKDL*HAALPF
Trigger: GAAAGGAAGAGCAGCGTGCCAGAGATCTTTTCTTTG...GGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCAAAAGGAGTAATTGATTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp CCTATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCACAAAGAAAAGATCTCTaGCACGCTGCTCTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: PIYAQEVVWLLKTCWSLPQRKDL*HAALPF
Trigger: GAAAGGAAGAGCAGCGTGCCAGAGATCTTTTCTTTG...TGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR CCA 90 bp CTGATTAGTCTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAGTTCCCAGGTTCTGCTaGTTGCTCTTTCGATTACAG +
Preference number: 4 (lower is better)
Translates to: LISLHSFHEEIRNPKSKEVPRFC*LLFRLQ
Trigger: CTGTAATCGAAAGAGCAACCAGCAGAACCTGGGAAC...TTCTTTGCTCTTTGGATTCCGGATCTCTTCATGAAACGAGTGGAGACTAATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp TCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACCTATCTATGCTCAAGCAACCTCATCTTTGCTaGTGTACTCCACTATTTCTG +
Preference number: 4 (lower is better)
Translates to: SSKALPPQANPLYLSMLKQPHLC*CTPLFL
Trigger: CAGAAATAGTGGAGTACACCAGCAAAGATGAGGTTG...CTTGAGCATAGATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp GTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACCTATCTATGCTCAAATTCCAATGGGGCGATaGCGTTTATTTGATAGGCAT +
Preference number: 4 (lower is better)
Translates to: VQQSLTTSSKPTIPIYAQIPMGR*RLFDRH
Trigger: ATGCCTATCAAATAAACGCCATCGCCCCATTGGAAT...TTGAGCATAGATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp GCAATCTTCTCCTTGAGAACCTTCCAGTCCCATAGGTCTGTAGGAGTAACATTCAATTCCTTTGCTAACTaGAGAGCCCTCATAGGTTTC +
Preference number: 4 (lower is better)
Translates to: AIFSLRTFQSHRSVGVTFNSFAN*RALIGF
Trigger: GAAACCTATGAGGGCTCTCCAGTTAGCAAAGGAATT...GAATGTTACTCCTACAGACCTATGGGACTGGAAGGTTCTCAAGGAGAAGATTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp GCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTTCCGTCATCAGGAATTTCTaGTATGCTCTGAATAGAGCC +
Preference number: 4 (lower is better)
Translates to: AQEVVWLLKTCWSLPSLSVIRNF*YALNRA
Trigger: GGCTCTATTCAGAGCATACCAGAAATTCCTGATGAC...GGAAAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR CCA 90 bp GCTGCATTTGATGGTTCCCAGGTTCTGCTGGTTGCTCTTTCGATTACAGGAATCTTAGGCTCAGCAATGTaGATGTTCAAAGATTGGCTT +
Preference number: 4 (lower is better)
Translates to: AAFDGSQVLLVALSITGILGSAM*MFKDWL
Trigger: AAGCCAATCTTTGAACATCCACATTGCTGAGCCTAA...GATTCCTGTAATCGAAAGAGCAACCAGCAGAACCTGGGAACCATCAAATGCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp GTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTTCCTCAGGATCCACATTAGGCTCAGCAATGTaGATGTTCAAAGATTGGCTT +
Preference number: 4 (lower is better)
Translates to: VWLLKTCWSLPSLSSGSTLGSAM*MFKDWL
Trigger: AAGCCAATCTTTGAACATCCACATTGCTGAGCCTAA...TGTGGATCCTGAGGAAAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp ACTGAAGACATGCTGGTCTCTTCCAAGTCTTTCCTCAGGATCCACACATCAGACTTATTTAGAGTGAACTaGATTGGATTAGCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: TEDMLVSSKSFLRIHTSDLFRVN*IGLAAG
Trigger: ACCAGCGGCTAATCCAATCCAGTTCACTCTAAATAA...GTCTGATGTGTGGATCCTGAGGAAAGACTTGGAAGAGACCAGCATGTCTTCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp CACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAAAGATCTCTGGCGCTCAAGAAGTAGTTTaGCTACTGAAGACATGCTGG +
Preference number: 4 (lower is better)
Translates to: HSFHEEIRNPKSKEKISGAQEVV*LLKTCW
Trigger: CCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGC...GCCAGAGATCTTTTCTTTGCTCTTTGGATTCCGGATCTCTTCATGAAACGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp CTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTGCTCAAGAAGTAGTTTaGCTACTGAAGACATGCTGG +
Preference number: 4 (lower is better)
Translates to: LCSRSSLATEDMLVSSKSAQEVV*LLKTCW
Trigger: CCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGC...AGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
3UTR CAA 72 bp CGATCTTTATTGGCCAGAACAATATCCAATGTTGACTaGGCCACCATGGGAGAGTGTTTGCCATTATGTGGA +
Preference number: 4 (lower is better)
Translates to: RSLLARTISNVD*ATMGECLPLCG
Trigger: TCCACATAATGGCAAACACTCTCCCATGGTGGCCAAGTCAACATTGGATATTGTTCTGGCCAATAAAGATCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
3UTR CAA 72 bp TCAGGCGATCTTTATTGGCCAGAACAATATCCAATGTaGACTTGGCCACCATGGGAGAGTGTTTGCCATTAT +
Preference number: 4 (lower is better)
Translates to: SGDLYWPEQYPM*TWPPWESVCHY
Trigger: ATAATGGCAAACACTCTCCCATGGTGGCCAAGTCAACATTGGATATTGTTCTGGCCAATAAAGATCGCCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
CDS-3UTR TCA 90 bp CAGATAAAGGTCCTATCAGTACTTCTCATGAGTTATCACTCAGTTTTGCTTCTACGCTTGTTCCCACCTTaGTCCACATATCGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: QIKVLSVLLMSYHSVLLLRLFPP*STYRAV
Trigger: CACAGCTCGATATGTGGATCAAGGTGGGAACAAGCG...TAGAAGCAAAACTGAGTGATAACTCATGAGAAGTACTGATAGGACCTTTATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR TCA 90 bp AGTCTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAAAGATCTCTCCACTCGTTTCATaGAGAGATCCGGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: SLHSFHEEIRNPKSKEKISPLVS*RDPESK
Trigger: TTTGGATTCCGGATCTCTTCATGAAACGAGTGGAGA...GATCTTTTCTTTGCTCTTTGGATTCCGGATCTCTTCATGAAACGAGTGGAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp ATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTTCTCCACTCGTTTCATaGAGAGATCCGGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: IYAQEVVWLLKTCWSLPSSPLVS*RDPESK
Trigger: TTTGGATTCCGGATCTCTTCATGAAACGAGTGGAGA...ACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR TCA 90 bp TATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGATCAAAGACCAGTCCTaGTTAGTCTCCACTCGTTTC +
Preference number: 4 (lower is better)
Translates to: YLCSRSSLATEDMLVSSKIKDQS*LVSTRF
Trigger: GAAACGAGTGGAGACTAATCAGGACTGGTCTTTGAT...CTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR TCA 90 bp AGTTTTGCTTCTAGAGACCCACCAGTCAAAGCAGTAAAACTAAATCTCCTTAACACAGGTTGCTGCATTTaGTGGTTCCCAGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: SFASRDPPVKAVKLNLLNTGCCI*WFPGSA
Trigger: AGCAGAACCTGGGAACCATCAAATGCAGCAACCTGT...GTTAAGGAGATTTAGTTTTACTGCTTTGACTGGTGGGTCTCTAGAAGCAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp TCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAAAGATCTCTGGCACGATGTGTGTTCTGATGTaGCATACATATTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SFHEEIRNPKSKEKISGTMCVLM*HTYSGP
Trigger: TGGCCCTGAATATGTATGTCACATCAGAACACACAT...CGTGCCAGAGATCTTTTCTTTGCTCTTTGGATTCCGGATCTCTTCATGAAACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp CCTATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAATGTGTGTTCTGATGTaGCATACATATTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: PIYAQEVVWLLKTCWSLPMCVLM*HTYSGP
Trigger: TGGCCCTGAATATGTATGTCACATCAGAACACACAT...TGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR TCA 90 bp ATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTATTGGCTTTGATCAATaGAAGCACCTCTCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: IYAQEVVWLLKTCWSLPSIGFDQ*KHLSQL
Trigger: CAGCTGAGAGAGGTGCTTTCATTGATCAAAGCCAAT...ACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR TCA 90 bp TATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTATTGGCTTTGATCAATaGAAGCACCTCTCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: YAQEVVWLLKTCWSLPSLIGFDQ*KHLSQL
Trigger: CAGCTGAGAGAGGTGCTTTCATTGATCAAAGCCAAT...AAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR GCA 90 bp TTTGCCTGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATATTAGAGTGTCATAAATaGCTTCAATGCTGTCATCTT +
Preference number: 4 (lower is better)
Translates to: FACNRVQQSLTTSSKPTILECHK*LQCCHL
Trigger: AAGATGACAGCATTGAAGGCATTTATGACACTCTAA...TATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp TTTTGCCTGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATTTAGAGTGTCATAAATaGCTTCAATGCTGTCATCTT +
Preference number: 4 (lower is better)
Translates to: FCLQQGPAKPYHLKQTHYLECHK*LQCCHL
Trigger: AAGATGACAGCATTGAAGGCATTTATGACACTCTAA...ATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp TCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTTCCTCGAGCTTTTACAACTTTaGGGACACGACCTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: SRSSLATEDMLVSSKSFLELLQL*GHDLVS
Trigger: AGAAACAAGGTCGTGTCCGCAAAGTTGTAAAAGCTC...GAGGAAAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp CCTATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAGAGCTTTTACAACTTTaGGGACACGACCTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: PIYAQEVVWLLKTCWSLPELLQL*GHDLVS
Trigger: AGAAACAAGGTCGTGTCCGCAAAGTTGTAAAAGCTC...TGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR GCA 90 bp CCTATCAGTACTTCTCATGAGTTATCACTCAGTTTTGCTTCTAGAGACCCACCACCAGGTTCTGCTGGTTaGTCTTTCGATTACAGGAAT +
Preference number: 4 (lower is better)
Translates to: PISTSHELSLSFASRDPPPGSAG*SFDYRN
Trigger: ATTCCTGTAATCGAAAGAGCAACCAGCAGAACCTGG...TGGTGGGTCTCTAGAAGCAAAACTGAGTGATAACTCATGAGAAGTACTGATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp AGTCTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAAAGATCCCAGGTTCTGCTGGTTaGTCTTTCGATTACAGGAAT +
Preference number: 4 (lower is better)
Translates to: SLHSFHEEIRNPKSKEKIPGSAG*SFDYRN
Trigger: ATTCCTGTAATCGAAAGAGCAACCAGCAGAACCTGG...GATCTTTTCTTTGCTCTTTGGATTCCGGATCTCTTCATGAAACGAGTGGAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp TATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTCCAGGTTCTGCTGGTTaGTCTTTCGATTACAGGAAT +
Preference number: 4 (lower is better)
Translates to: YAQEVVWLLKTCWSLPSLPGSAG*SFDYRN
Trigger: ATTCCTGTAATCGAAAGAGCAACCAGCAGAACCTGG...AAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR GCA 90 bp GCCAAATTACAAACAGCAACCTCATCTTTGCTGGTGTACTCCACTATTTCTGTGATGGTTCCCAGGTTCTaGTGGTTGCTCTTTCGATTA +
Preference number: 4 (lower is better)
Translates to: AKLQTATSSLLVYSTISVMVPRF*WLLFRL
Trigger: TAATCGAAAGAGCAACCAGCAGAACCTGGGAACCAT...CACAGAAATAGTGGAGTACACCAGCAAAGATGAGGTTGCTGTTTGTAATTTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp TATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGAGCACCTCTCTCAGCTaGCATCTTGAGAACAGTTTT +
Preference number: 4 (lower is better)
Translates to: YLCSRSSLATEDMLVSSKSTSLS*HLENSF
Trigger: AAAACTGTTCTCAAGATGGCAGCTGAGAGAGGTGCT...CTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR GCA 90 bp GGAATCCAAAGAGCAAAGAAAAGATCTCTGGCACGCTGCTCTTCCTTTCCTGTGCACTATACCTATCTATaGTCAAGAAGTAGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: GIQRAKKRSLARCSSFPVHYTYL*SRSSLA
Trigger: AGCCAAACTACTTCTTGAGCATAGATAGGTATAGTG...CACAGGAAAGGAAGAGCAGCGTGCCAGAGATCTTTTCTTTGCTCTTTGGATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp AGTACTTCTCATGAGTTATCACTCAGTTTTGCTTCTAGAGACCCACCAGTCAAAATTACTCCTTTTGCCTaGAACAGGGTCCAGCAAAGC +
Preference number: 4 (lower is better)
Translates to: STSHELSLSFASRDPPVKITPFA*NRVQQS
Trigger: GCTTTGCTGGACCCTGTTGCAGGCAAAAGGAGTAAT...TTTGACTGGTGGGTCTCTAGAAGCAAAACTGAGTGATAACTCATGAGAAGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp ATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTATCAATTACTCCTTTTaGCTGCAACAGGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: IYAQEVVWLLKTCWSLPSINYSF*LQQGPA
Trigger: TGCTGGACCCTGTTGCAGGCAAAAGGAGTAATTGAT...ACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp TCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACCTATCTATGCTCAAGTCAGGCGATCTTTATTaGCCAGAACAATATCCAATG +
Preference number: 4 (lower is better)
Translates to: SSKALPPQANPLYLSMLKSGDLY*PEQYPM
Trigger: CATTGGATATTGTTCTGGCCAATAAAGATCGCCTGA...CTTGAGCATAGATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CCA 90 bp CTTTCGATTACAGGAATCTTTGTAGAGCATATACGGGGTGCCTGTTTCCGTCTGTCAATGTCTTCTTTGTaGATCCCAACAGATACTCTC +
Preference number: 4 (lower is better)
Translates to: LSITGIFVEHIRGACFRLSMSSL*IPTDTL
Trigger: GAGAGTATCTGTTGGGATCCACAAAGAAGACATTGA...CAGACGGAAACAGGCACCCCGTATATGCTCTACAAAGATTCCTGTAATCGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CCA 90 bp ATTAGTCTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAAAGACAGCTAGAAAGTTGTaGGCGGTTGGTACCAGCATT +
Preference number: 4 (lower is better)
Translates to: ISLHSFHEEIRNPKSKEKTARKL*AVGTSI
Trigger: AATGCTGGTACCAACCGCCCACAACTTTCTAGCTGT...CTTTTCTTTGCTCTTTGGATTCCGGATCTCTTCATGAAACGAGTGGAGACTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CCA 90 bp AGTCTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAAAGATCCAAAGAAAAGATCTCTaGCACGCTGCTCTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: SLHSFHEEIRNPKSKEKIQRKDL*HAALPF
Trigger: GAAAGGAAGAGCAGCGTGCCAGAGATCTTTTCTTTG...GATCTTTTCTTTGCTCTTTGGATTCCGGATCTCTTCATGAAACGAGTGGAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp TATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTCAAAGAAAAGATCTCTaGCACGCTGCTCTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: YAQEVVWLLKTCWSLPSLQRKDL*HAALPF
Trigger: GAAAGGAAGAGCAGCGTGCCAGAGATCTTTTCTTTG...AAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR CCA 90 bp CTTCTCATGAGTTATCACTCAGTTTTGCTTCTAGAGACCCACCAGTCAAAGCAGCAACCTCATCTTTGCTaGTGTACTCCACTATTTCTG +
Preference number: 4 (lower is better)
Translates to: LLMSYHSVLLLETHQSKQQPHLC*CTPLFL
Trigger: CAGAAATAGTGGAGTACACCAGCAAAGATGAGGTTG...CTGCTTTGACTGGTGGGTCTCTAGAAGCAAAACTGAGTGATAACTCATGAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp ATGAAACCTTACTTAACCACTCCCTGTATGCAAGATGACTTATTTTGCATTCCTCTCATAGGTTTCGTATaGGCCCTGCTCCTTGGCAAG +
Preference number: 4 (lower is better)
Translates to: MKPYLTTPCMQDDLFCIPLIGFV*ALLLGK
Trigger: CTTGCCAAGGAGCAGGGCCCATACGAAACCTATGAG...AGGAATGCAAAATAAGTCATCTTGCATACAGGGAGTGGTTAAGTAAGGTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp CTTCTCATGAGTTATCACTCAGTTTTGCTTCTAGAGACCCACCAGTCAAAGCAGAATTCCTTTGCTAACTaGAGAGCCCTCATAGGTTTC +
Preference number: 4 (lower is better)
Translates to: LLMSYHSVLLLETHQSKQNSFAN*RALIGF
Trigger: GAAACCTATGAGGGCTCTCCAGTTAGCAAAGGAATT...CTGCTTTGACTGGTGGGTCTCTAGAAGCAAAACTGAGTGATAACTCATGAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp TCCTTGAGAACCTTCCAGTCCCATAGGTCTGTAGGAGTAACATTCCACATATCAGTCATCAGGAATTTCTaGTATGCTCTGAATAGAGCC +
Preference number: 4 (lower is better)
Translates to: SLRTFQSHRSVGVTFHISVIRNF*YALNRA
Trigger: GGCTCTATTCAGAGCATACCAGAAATTCCTGATGAC...TGATATGTGGAATGTTACTCCTACAGACCTATGGGACTGGAAGGTTCTCAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp GTCCTGATTAGTCTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGTCATCAGGAATTTCTaGTATGCTCTGAATAGAGCC +
Preference number: 4 (lower is better)
Translates to: VLISLHSFHEEIRNPKSKVIRNF*YALNRA
Trigger: GGCTCTATTCAGAGCATACCAGAAATTCCTGATGAC...TTTGCTCTTTGGATTCCGGATCTCTTCATGAAACGAGTGGAGACTAATCAGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp TCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACCTATCTATGCTCAAGTTAGGCTCAGCAATGTaGATGTTCAAAGATTGGCTT +
Preference number: 4 (lower is better)
Translates to: SSKALPPQANPLYLSMLKLGSAM*MFKDWL
Trigger: AAGCCAATCTTTGAACATCCACATTGCTGAGCCTAA...CTTGAGCATAGATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp ATGAAACCTTACTTAACCACTCCCTGTATGCAAGATGACTTATTTTGCATTCCTCCAAAGAGCACACCATaGCTGCTGTGTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: MKPYLTTPCMQDDLFCIPPKSTP*LLCSSP
Trigger: AGGAGAGGAACACAGCAGCCATGGTGTGCTCTTTGG...AGGAATGCAAAATAAGTCATCTTGCATACAGGGAGTGGTTAAGTAAGGTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp GATAAAGGTCCTATCAGTACTTCTCATGAGTTATCACTCAGTTTTGCTTCTAGACCAAAGAGCACACCATaGCTGCTGTGTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: DKGPISTSHELSLSFASRPKSTP*LLCSSP
Trigger: AGGAGAGGAACACAGCAGCCATGGTGTGCTCTTTGG...TCTAGAAGCAAAACTGAGTGATAACTCATGAGAAGTACTGATAGGACCTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp TATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGGCTCAAGAAGTAGTTTaGCTACTGAAGACATGCTGG +
Preference number: 4 (lower is better)
Translates to: YLCSRSSLATEDMLVSSKAQEVV*LLKTCW
Trigger: CCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGC...CTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
3UTR CAA 72 bp CAAACCCACTATACCTATCTATGCTCAAGAAGTAGTTaGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCT +
Preference number: 4 (lower is better)
Translates to: QTHYTYLCSRSS*ATEDMLVSSKS
Trigger: AGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATAGGTATAGTGGGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp ATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTATGTGTGTTCTGATGTaGCATACATATTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: IYAQEVVWLLKTCWSLPSMCVLM*HTYSGP
Trigger: TGGCCCTGAATATGTATGTCACATCAGAACACACAT...ACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR TCA 90 bp CCTATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCATTGAGAACAGTTTTCTaGGAGATTTCCCACACAGTT +
Preference number: 4 (lower is better)
Translates to: PIYAQEVVWLLKTCWSLPLRTVF*EISHTV
Trigger: AACTGTGTGGGAAATCTCTCAGAAAACTGTTCTCAA...TGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR TCA 90 bp AGTACTTCTCATGAGTTATCACTCAGTTTTGCTTCTAGAGACCCACCAGTCAAATCTCAGCTGCCATCTTaGGAACAGTTTTCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: STSHELSLSFASRDPPVKSQLPS*EQFSER
Trigger: TCTCTCAGAAAACTGTTCTCAAGATGGCAGCTGAGA...TTTGACTGGTGGGTCTCTAGAAGCAAAACTGAGTGATAACTCATGAGAAGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp ACACATCAAAGACCAGTCCTGATTAGTCTCCACTCGTTTCATGAAGAGATCCGGTATCAGTACTTCTCATaGGTTATCACTCAGTTTTGC +
Preference number: 4 (lower is better)
Translates to: THQRPVLISLHSFHEEIRYQYFS*VITQFC
Trigger: GCAAAACTGAGTGATAACTCATGAGAAGTACTGATA...CCGGATCTCTTCATGAAACGAGTGGAGACTAATCAGGACTGGTCTTTGATGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp TATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTGGCCTCCCAAAGTGTaGAACTTGTTATTTGACTTC +
Preference number: 4 (lower is better)
Translates to: YLCSRSSLATEDMLVSSKWPPKV*NLLFDF
Trigger: GAAGTCAAATAACAAGTTTCACACTTTGGGAGGCCA...CTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533495.5
ENST00000534285.5
CDS-3UTR GCA 90 bp CAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACCTATCTATGCTCAAGAACCATGGGAGAGTGTTTaGCATTATGTGGATTTATGT +
Preference number: 4 (lower is better)
Translates to: QQSLTTSSKPTIPIYAQEPWESV*HYVDLC
Trigger: ACATAAATCCACATAATGGCAAACACTCTCCCATGG...TTCTTGAGCATAGATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR GCA 90 bp TACCACCTCAAGCAAACCCACTATACCTATCTATGCTCAAGAAGTAGTTTGGCTGAGCTTTTACAACTTTaGGGACACGACCTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: YHLKQTHYTYLCSRSSLAELLQL*GHDLVS
Trigger: AGAAACAAGGTCGTGTCCGCAAAGTTGTAAAAGCTC...AGCCAAACTACTTCTTGAGCATAGATAGGTATAGTGGGTTTGCTTGAGGTGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp AAACCCACTATACCTATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCATGGTTCCCAGGTTCTaGTGGTTGCTCTTTCGATTA +
Preference number: 4 (lower is better)
Translates to: KPTIPIYAQEVVWLLKTCMVPRF*WLLFRL
Trigger: TAATCGAAAGAGCAACCAGCAGAACCTGGGAACCAT...GCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATAGGTATAGTGGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp ATACAACTCACAGCAACACCAATTCCTCCAGCAGACTTAGAAATCAATGCACATCAGGATAAAAGCATCTaGCAGACCTTGTACCCCAAT +
Preference number: 4 (lower is better)
Translates to: IQLTATPIPPADLEINAHQDKSI*QTLYPN
Trigger: ATTGGGGTACAAGGTCTGGCAGATGCTTTTATCCTG...ATGTGCATTGATTTCTAAGTCTGCTGGAGGAATTGGTGTTGCTGTGAGTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
CDS-3UTR GCA 90 bp GTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTTCCTCAGGATCCACATCTTATACCATACTTTaGAATCTTCTCCTTGAGAAC +
Preference number: 4 (lower is better)
Translates to: VWLLKTCWSLPSLSSGSTSYTIL*NLLLEN
Trigger: GTTCTCAAGGAGAAGATTGCAAAGTATGGTATAAGA...TGTGGATCCTGAGGAAAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp ATACAACTCACAGCAACACCAATTCCTCCAGCAGACTTAGAAATCAATGCACATATCAATTACTCCTTTTaGCTGCAACAGGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: IQLTATPIPPADLEINAHINYSF*LQQGPA
Trigger: TGCTGGACCCTGTTGCAGGCAAAAGGAGTAATTGAT...ATGTGCATTGATTTCTAAGTCTGCTGGAGGAATTGGTGTTGCTGTGAGTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CCA 90 bp AAACCCACTATACCTATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCCAAAGAAAAGATCTCTaGCACGCTGCTCTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: KPTIPIYAQEVVWLLKTCQRKDL*HAALPF
Trigger: GAAAGGAAGAGCAGCGTGCCAGAGATCTTTTCTTTG...GCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATAGGTATAGTGGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp TATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTCAACCTCATCTTTGCTaGTGTACTCCACTATTTCTG +
Preference number: 4 (lower is better)
Translates to: YAQEVVWLLKTCWSLPSLQPHLC*CTPLFL
Trigger: CAGAAATAGTGGAGTACACCAGCAAAGATGAGGTTG...AAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR CCA 90 bp GCCAAATTACAAACAGCAACCTCATCTTTGCTGGTGTACTCCACTATTTCTGTGATTCCAATGGGGCGATaGCGTTTATTTGATAGGCAT +
Preference number: 4 (lower is better)
Translates to: AKLQTATSSLLVYSTISVIPMGR*RLFDRH
Trigger: ATGCCTATCAAATAAACGCCATCGCCCCATTGGAAT...CACAGAAATAGTGGAGTACACCAGCAAAGATGAGGTTGCTGTTTGTAATTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp ATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTATTCCAATGGGGCGATaGCGTTTATTTGATAGGCAT +
Preference number: 4 (lower is better)
Translates to: IYAQEVVWLLKTCWSLPSIPMGR*RLFDRH
Trigger: ATGCCTATCAAATAAACGCCATCGCCCCATTGGAAT...ACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR CCA 90 bp CTCATCTTTGCTGGTGTACTCCACTATTTCTGTGCACAGGTTGCTGCATTTGATTGCTTATTCAGTAACTaGGCTTCTGCACTCTCAAAA +
Preference number: 4 (lower is better)
Translates to: LIFAGVLHYFCAQVAAFDCLFSN*ASALSK
Trigger: TTTTGAGAGTGCAGAAGCCCAGTTACTGAATAAGCA...ATCAAATGCAGCAACCTGTGCACAGAAATAGTGGAGTACACCAGCAAAGATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp CCTATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCATGCTTATTCAGTAACTaGGCTTCTGCACTCTCAAAA +
Preference number: 4 (lower is better)
Translates to: PIYAQEVVWLLKTCWSLPCLFSN*ASALSK
Trigger: TTTTGAGAGTGCAGAAGCCCAGTTACTGAATAAGCA...TGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR CCA 90 bp GCTAAAGGGGTGATGAAACCTTACTTAACCACTCCCTGTATGCAAGATGACTTAAATTCCTTTGCTAACTaGAGAGCCCTCATAGGTTTC +
Preference number: 4 (lower is better)
Translates to: AKGVMKPYLTTPCMQDDLNSFAN*RALIGF
Trigger: GAAACCTATGAGGGCTCTCCAGTTAGCAAAGGAATT...TAAGTCATCTTGCATACAGGGAGTGGTTAAGTAAGGTTTCATCACCCCTTTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp TATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGAATTCCTTTGCTAACTaGAGAGCCCTCATAGGTTTC +
Preference number: 4 (lower is better)
Translates to: YLCSRSSLATEDMLVSSKNSFAN*RALIGF
Trigger: GAAACCTATGAGGGCTCTCCAGTTAGCAAAGGAATT...CTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR CCA 90 bp ATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTGTCATCAGGAATTTCTaGTATGCTCTGAATAGAGCC +
Preference number: 4 (lower is better)
Translates to: IYAQEVVWLLKTCWSLPSVIRNF*YALNRA
Trigger: GGCTCTATTCAGAGCATACCAGAAATTCCTGATGAC...ACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR CCA 90 bp CTGATTAGTCTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAGTCATCAGGAATTTCTaGTATGCTCTGAATAGAGCC +
Preference number: 4 (lower is better)
Translates to: LISLHSFHEEIRNPKSKEVIRNF*YALNRA
Trigger: GGCTCTATTCAGAGCATACCAGAAATTCCTGATGAC...TTCTTTGCTCTTTGGATTCCGGATCTCTTCATGAAACGAGTGGAGACTAATCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp CTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTTAGGCTCAGCAATGTaGATGTTCAAAGATTGGCTT +
Preference number: 4 (lower is better)
Translates to: LCSRSSLATEDMLVSSKSLGSAM*MFKDWL
Trigger: AAGCCAATCTTTGAACATCCACATTGCTGAGCCTAA...AGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR CCA 90 bp AAACCCACTATACCTATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCGCTCAAGAAGTAGTTTaGCTACTGAAGACATGCTGG +
Preference number: 4 (lower is better)
Translates to: KPTIPIYAQEVVWLLKTCAQEVV*LLKTCW
Trigger: CCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGC...GCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATAGGTATAGTGGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp CAGGTTCTGCTGGTTGCTCTTTCGATTACAGGAATCTTTGTAGAGCATATACGGCTTCCATCACATCACTaGACACTTTCTTTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: QVLLVALSITGIFVEHIRLPSHH*TLSLFL
Trigger: AAGAAACAAAGAAAGTGTTCAGTGATGTGATGGAAG...CCGTATATGCTCTACAAAGATTCCTGTAATCGAAAGAGCAACCAGCAGAACCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532170.5
CDS-3UTR TCA 90 bp CCACATATCATACTGAAGAATTCCTTTGCTAACTGGAGAGCCCTCATAGGTTTCGTCGTATGTGTGTTCTaGTGTGACATACATATTCAG +
Preference number: 4 (lower is better)
Translates to: PHIILKNSFANWRALIGFVVCVF*CDIHIQ
Trigger: CTGAATATGTATGTCACATCAGAACACACATACGAC...GAAACCTATGAGGGCTCTCCAGTTAGCAAAGGAATTCTTCAGTATGATATGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp ATACATATTCAGGGCCAGGGAAGCCAAATTACAAACAGCAACCTCATCTTTGCTGTCGTATGTGTGTTCTaGTGTGACATACATATTCAG +
Preference number: 4 (lower is better)
Translates to: IHIQGQGSQITNSNLIFAVVCVF*CDIHIQ
Trigger: CTGAATATGTATGTCACATCAGAACACACATACGAC...AGCAAAGATGAGGTTGCTGTTTGTAATTTGGCTTCCCTGGCCCTGAATATGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp TATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTGTCGTATGTGTGTTCTaGTGTGACATACATATTCAG +
Preference number: 4 (lower is better)
Translates to: YAQEVVWLLKTCWSLPSLVVCVF*CDIHIQ
Trigger: CTGAATATGTATGTCACATCAGAACACACATACGAC...AAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR TCA 90 bp ATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTTTGAGAACAGTTTTCTaGGAGATTTCCCACACAGTT +
Preference number: 4 (lower is better)
Translates to: IYAQEVVWLLKTCWSLPSLRTVF*EISHTV
Trigger: AACTGTGTGGGAAATCTCTCAGAAAACTGTTCTCAA...ACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR TCA 90 bp CTCATCTTTGCTGGTGTACTCCACTATTTCTGTGCACAGGTTGCTGCATTTGATTATCAGTACTTCTCATaGGTTATCACTCAGTTTTGC +
Preference number: 4 (lower is better)
Translates to: LIFAGVLHYFCAQVAAFDYQYFS*VITQFC
Trigger: GCAAAACTGAGTGATAACTCATGAGAAGTACTGATA...ATCAAATGCAGCAACCTGTGCACAGAAATAGTGGAGTACACCAGCAAAGATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp TGCTCTTTCGATTACAGGAATCTTTGTAGAGCATATACGGGGTGCCTGTTTCCGTTAGAGTGTCATAAATaGCTTCAATGCTGTCATCTT +
Preference number: 4 (lower is better)
Translates to: CSFDYRNLCRAYTGCLFPLECHK*LQCCHL
Trigger: AAGATGACAGCATTGAAGGCATTTATGACACTCTAA...CGGAAACAGGCACCCCGTATATGCTCTACAAAGATTCCTGTAATCGAAAGAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp TCAAGCAAACCCACTATACCTATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGGAGCTTTTACAACTTTaGGGACACGACCTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: SSKPTIPIYAQEVVWLLKELLQL*GHDLVS
Trigger: AGAAACAAGGTCGTGTCCGCAAAGTTGTAAAAGCTC...CTTCAGTAGCCAAACTACTTCTTGAGCATAGATAGGTATAGTGGGTTTGCTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp AGTTTTGCTTCTAGAGACCCACCAGTCAAAGCAGTAAAACTAAATCTCCTTAACCAGGATAAAAGCATCTaGCAGACCTTGTACCCCAAT +
Preference number: 4 (lower is better)
Translates to: SFASRDPPVKAVKLNLLNQDKSI*QTLYPN
Trigger: ATTGGGGTACAAGGTCTGGCAGATGCTTTTATCCTG...GTTAAGGAGATTTAGTTTTACTGCTTTGACTGGTGGGTCTCTAGAAGCAAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp GAATCCAAAGAGCAAAGAAAAGATCTCTGGCACGCTGCTCTTCCTTTCCTGTGTTCTTATACCATACTTTaGAATCTTCTCCTTGAGAAC +
Preference number: 4 (lower is better)
Translates to: ESKEQRKDLWHAALPFLCSYTIL*NLLLEN
Trigger: GTTCTCAAGGAGAAGATTGCAAAGTATGGTATAAGA...ACACAGGAAAGGAAGAGCAGCGTGCCAGAGATCTTTTCTTTGCTCTTTGGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp GCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTTCCTCTTATACCATACTTTaGAATCTTCTCCTTGAGAAC +
Preference number: 4 (lower is better)
Translates to: AQEVVWLLKTCWSLPSLSSYTIL*NLLLEN
Trigger: GTTCTCAAGGAGAAGATTGCAAAGTATGGTATAAGA...GGAAAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR GCA 90 bp CTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTCACTATACCTATCTATaGTCAAGAAGTAGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: LCSRSSLATEDMLVSSKSHYTYL*SRSSLA
Trigger: AGCCAAACTACTTCTTGAGCATAGATAGGTATAGTG...AGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp AAGCCTTACCACCTCAAGCAAACCCACTATACCTATCTATGCTCAAGAAGTAGTTCAGGCGATCTTTATTaGCCAGAACAATATCCAATG +
Preference number: 4 (lower is better)
Translates to: KPYHLKQTHYTYLCSRSSSGDLY*PEQYPM
Trigger: CATTGGATATTGTTCTGGCCAATAAAGATCGCCTGA...ACTACTTCTTGAGCATAGATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CCA 90 bp ATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTTCAGGCGATCTTTATTaGCCAGAACAATATCCAATG +
Preference number: 4 (lower is better)
Translates to: IYAQEVVWLLKTCWSLPSSGDLY*PEQYPM
Trigger: CATTGGATATTGTTCTGGCCAATAAAGATCGCCTGA...ACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CCA 90 bp CAGTACTTTAAATCAATTACTCCTTTTGCCTGCAACAGGGTCCAGCAAAGCCTTTCAATGTCTTCTTTGTaGATCCCAACAGATACTCTC +
Preference number: 4 (lower is better)
Translates to: QYFKSITPFACNRVQQSLSMSSL*IPTDTL
Trigger: GAGAGTATCTGTTGGGATCCACAAAGAAGACATTGA...AAGGCTTTGCTGGACCCTGTTGCAGGCAAAAGGAGTAATTGATTTAAAGTACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CCA 90 bp ATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTTCAATGTCTTCTTTGTaGATCCCAACAGATACTCTC +
Preference number: 4 (lower is better)
Translates to: IYAQEVVWLLKTCWSLPSSMSSL*IPTDTL
Trigger: GAGAGTATCTGTTGGGATCCACAAAGAAGACATTGA...ACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CCA 90 bp TCTAGAGACCCACCAGTCAAAGCAGTAAAACTAAATCTCCTTAACAAAACTGAAGTACCCCAATTCCAATaGGGCGATGGCGTTTATTTG +
Preference number: 4 (lower is better)
Translates to: SRDPPVKAVKLNLLNKTEVPQFQ*GDGVYL
Trigger: CAAATAAACGCCATCGCCCCATTGGAATTGGGGTAC...TTCAGTTTTGTTAAGGAGATTTAGTTTTACTGCTTTGACTGGTGGGTCTCTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp CCTATCAGTACTTCTCATGAGTTATCACTCAGTTTTGCTTCTAGAGACCCACCATTAGGCTCAGCAATGTaGATGTTCAAAGATTGGCTT +
Preference number: 4 (lower is better)
Translates to: PISTSHELSLSFASRDPPLGSAM*MFKDWL
Trigger: AAGCCAATCTTTGAACATCCACATTGCTGAGCCTAA...TGGTGGGTCTCTAGAAGCAAAACTGAGTGATAACTCATGAGAAGTACTGATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp TATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTTTATTTAGAGTGAACTaGATTGGATTAGCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: YAQEVVWLLKTCWSLPSLLFRVN*IGLAAG
Trigger: ACCAGCGGCTAATCCAATCCAGTTCACTCTAAATAA...AAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR TCA 90 bp TTATCACTCAGTTTTGCTTCTAGAGACCCACCAGTCAAAGCAGTAAAACTAAATAACAATATCCAATGTTaGCTTGGCCACCATGGGAGA +
Preference number: 4 (lower is better)
Translates to: LSLSFASRDPPVKAVKLNNNIQC*LGHHGR
Trigger: TCTCCCATGGTGGCCAAGTCAACATTGGATATTGTT...ATTTAGTTTTACTGCTTTGACTGGTGGGTCTCTAGAAGCAAAACTGAGTGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR TCA 90 bp CAGATAAAGGTCCTATCAGTACTTCTCATGAGTTATCACTCAGTTTTGCTTCTAATCAAAGACCAGTCCTaGTTAGTCTCCACTCGTTTC +
Preference number: 4 (lower is better)
Translates to: QIKVLSVLLMSYHSVLLLIKDQS*LVSTRF
Trigger: GAAACGAGTGGAGACTAATCAGGACTGGTCTTTGAT...TAGAAGCAAAACTGAGTGATAACTCATGAGAAGTACTGATAGGACCTTTATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp AGTTTTGCTTCTAGAGACCCACCAGTCAAAGCAGTAAAACTAAATCTCCTTAACATGTGTGTTCTGATGTaGCATACATATTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SFASRDPPVKAVKLNLLNMCVLM*HTYSGP
Trigger: TGGCCCTGAATATGTATGTCACATCAGAACACACAT...GTTAAGGAGATTTAGTTTTACTGCTTTGACTGGTGGGTCTCTAGAAGCAAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp TCAAGCAAACCCACTATACCTATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGGTCGTATGTGTGTTCTaGTGTGACATACATATTCAG +
Preference number: 4 (lower is better)
Translates to: SSKPTIPIYAQEVVWLLKVVCVF*CDIHIQ
Trigger: CTGAATATGTATGTCACATCAGAACACACATACGAC...CTTCAGTAGCCAAACTACTTCTTGAGCATAGATAGGTATAGTGGGTTTGCTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp AAACCCACTATACCTATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTTGAGAACAGTTTTCTaGGAGATTTCCCACACAGTT +
Preference number: 4 (lower is better)
Translates to: KPTIPIYAQEVVWLLKTCLRTVF*EISHTV
Trigger: AACTGTGTGGGAAATCTCTCAGAAAACTGTTCTCAA...GCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATAGGTATAGTGGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp TTATCACTCAGTTTTGCTTCTAGAGACCCACCAGTCAAAGCAGTAAAACTAAATTCTCAGCTGCCATCTTaGGAACAGTTTTCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: LSLSFASRDPPVKAVKLNSQLPS*EQFSER
Trigger: TCTCTCAGAAAACTGTTCTCAAGATGGCAGCTGAGA...ATTTAGTTTTACTGCTTTGACTGGTGGGTCTCTAGAAGCAAAACTGAGTGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp CTCATCTTTGCTGGTGTACTCCACTATTTCTGTGCACAGGTTGCTGCATTTGATTTAGAGTGTCATAAATaGCTTCAATGCTGTCATCTT +
Preference number: 4 (lower is better)
Translates to: LIFAGVLHYFCAQVAAFDLECHK*LQCCHL
Trigger: AAGATGACAGCATTGAAGGCATTTATGACACTCTAA...ATCAAATGCAGCAACCTGTGCACAGAAATAGTGGAGTACACCAGCAAAGATGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp TGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTTCTTAGAGTGTCATAAATaGCTTCAATGCTGTCATCTT +
Preference number: 4 (lower is better)
Translates to: CSRSSLATEDMLVSSKSFLECHK*LQCCHL
Trigger: AAGATGACAGCATTGAAGGCATTTATGACACTCTAA...GAAAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR GCA 90 bp CTTCTCATGAGTTATCACTCAGTTTTGCTTCTAGAGACCCACCAGTCAAAGCAGATAGTTTCAAAGATCTaGTTATTCAGTAACTGGGCT +
Preference number: 4 (lower is better)
Translates to: LLMSYHSVLLLETHQSKQIVSKI*LFSNWA
Trigger: AGCCCAGTTACTGAATAAGCAGATCTTTGAAACTAT...CTGCTTTGACTGGTGGGTCTCTAGAAGCAAAACTGAGTGATAACTCATGAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp TCTAGAGACCCACCAGTCAAAGCAGTAAAACTAAATCTCCTTAACAAAACTGAAAGCACCTCTCTCAGCTaGCATCTTGAGAACAGTTTT +
Preference number: 4 (lower is better)
Translates to: SRDPPVKAVKLNLLNKTESTSLS*HLENSF
Trigger: AAAACTGTTCTCAAGATGGCAGCTGAGAGAGGTGCT...TTCAGTTTTGTTAAGGAGATTTAGTTTTACTGCTTTGACTGGTGGGTCTCTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp CTTCAGGTCATCAGGAATTTCTGGTATGCTCTGAATAGAGCCATTGCATGCAATCACTATACCTATCTATaGTCAAGAAGTAGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: LQVIRNFWYALNRAIACNHYTYL*SRSSLA
Trigger: AGCCAAACTACTTCTTGAGCATAGATAGGTATAGTG...ATTGCATGCAATGGCTCTATTCAGAGCATACCAGAAATTCCTGATGACCTGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp TTATCACTCAGTTTTGCTTCTAGAGACCCACCAGTCAAAGCAGTAAAACTAAATTATCCAATGTTGACTTaGCCACCATGGGAGAGTGTT +
Preference number: 4 (lower is better)
Translates to: LSLSFASRDPPVKAVKLNYPMLT*PPWESV
Trigger: AACACTCTCCCATGGTGGCCAAGTCAACATTGGATA...ATTTAGTTTTACTGCTTTGACTGGTGGGTCTCTAGAAGCAAAACTGAGTGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CCA 90 bp ATTAGTCTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAAAGCATCAACATATGTTGTaGTCTTTCAGCCACTTTTCC +
Preference number: 4 (lower is better)
Translates to: ISLHSFHEEIRNPKSKEKHQHML*SFSHFS
Trigger: GGAAAAGTGGCTGAAAGACCACAACATATGTTGATG...CTTTTCTTTGCTCTTTGGATTCCGGATCTCTTCATGAAACGAGTGGAGACTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CCA 90 bp TCAAGCAAACCCACTATACCTATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGTGCTTATTCAGTAACTaGGCTTCTGCACTCTCAAAA +
Preference number: 4 (lower is better)
Translates to: SSKPTIPIYAQEVVWLLKCLFSN*ASALSK
Trigger: TTTTGAGAGTGCAGAAGCCCAGTTACTGAATAAGCA...CTTCAGTAGCCAAACTACTTCTTGAGCATAGATAGGTATAGTGGGTTTGCTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp TCAAGCAAACCCACTATACCTATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGTTATTTAGAGTGAACTaGATTGGATTAGCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: SSKPTIPIYAQEVVWLLKLFRVN*IGLAAG
Trigger: ACCAGCGGCTAATCCAATCCAGTTCACTCTAAATAA...CTTCAGTAGCCAAACTACTTCTTGAGCATAGATAGGTATAGTGGGTTTGCTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp AGCCAAATTACAAACAGCAACCTCATCTTTGCTGGTGTACTCCACTATTTCTGTTTATTTAGAGTGAACTaGATTGGATTAGCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: SQITNSNLIFAGVLHYFCLFRVN*IGLAAG
Trigger: ACCAGCGGCTAATCCAATCCAGTTCACTCTAAATAA...ACAGAAATAGTGGAGTACACCAGCAAAGATGAGGTTGCTGTTTGTAATTTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR CAA 72 bp AAACTGTTTCTTATACCATACTTTGCAATCTTCTCCTaGAGAACCTTCCAGTCCCATAGGTCTGTAGGAGTA +
Preference number: 4 (lower is better)
Translates to: KLFLIPYFAIFS*RTFQSHRSVGV
Trigger: TACTCCTACAGACCTATGGGACTGGAAGGTTCTCAAGGAGAAGATTGCAAAGTATGGTATAAGAAACAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp AGTACTTCTCATGAGTTATCACTCAGTTTTGCTTCTAGAGACCCACCAGTCAAATATCAGTACTTCTCATaGGTTATCACTCAGTTTTGC +
Preference number: 4 (lower is better)
Translates to: STSHELSLSFASRDPPVKYQYFS*VITQFC
Trigger: GCAAAACTGAGTGATAACTCATGAGAAGTACTGATA...TTTGACTGGTGGGTCTCTAGAAGCAAAACTGAGTGATAACTCATGAGAAGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR TCA 90 bp TCTAGAGACCCACCAGTCAAAGCAGTAAAACTAAATCTCCTTAACAAAACTGAATGGCCTCCCAAAGTGTaGAACTTGTTATTTGACTTC +
Preference number: 4 (lower is better)
Translates to: SRDPPVKAVKLNLLNKTEWPPKV*NLLFDF
Trigger: GAAGTCAAATAACAAGTTTCACACTTTGGGAGGCCA...TTCAGTTTTGTTAAGGAGATTTAGTTTTACTGCTTTGACTGGTGGGTCTCTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533495.5
CDS-3UTR GCA 90 bp GCTAAAGGGGTGATGAAACCTTACTTAACCACTCCCTGTATGCAAGATGACTTAATAGTTTCAAAGATCTaGTTATTCAGTAACTGGGCT +
Preference number: 4 (lower is better)
Translates to: AKGVMKPYLTTPCMQDDLIVSKI*LFSNWA
Trigger: AGCCCAGTTACTGAATAAGCAGATCTTTGAAACTAT...TAAGTCATCTTGCATACAGGGAGTGGTTAAGTAAGGTTTCATCACCCCTTTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp TATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTATAGTTTCAAAGATCTaGTTATTCAGTAACTGGGCT +
Preference number: 4 (lower is better)
Translates to: YAQEVVWLLKTCWSLPSLIVSKI*LFSNWA
Trigger: AGCCCAGTTACTGAATAAGCAGATCTTTGAAACTAT...AAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR CCA 90 bp CAGATAAAGGTCCTATCAGTACTTCTCATGAGTTATCACTCAGTTTTGCTTCTACAACCTCATCTTTGCTaGTGTACTCCACTATTTCTG +
Preference number: 4 (lower is better)
Translates to: QIKVLSVLLMSYHSVLLLQPHLC*CTPLFL
Trigger: CAGAAATAGTGGAGTACACCAGCAAAGATGAGGTTG...TAGAAGCAAAACTGAGTGATAACTCATGAGAAGTACTGATAGGACCTTTATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp TCTAGAGACCCACCAGTCAAAGCAGTAAAACTAAATCTCCTTAACAAAACTGAAATTCCAATGGGGCGATaGCGTTTATTTGATAGGCAT +
Preference number: 4 (lower is better)
Translates to: SRDPPVKAVKLNLLNKTEIPMGR*RLFDRH
Trigger: ATGCCTATCAAATAAACGCCATCGCCCCATTGGAAT...TTCAGTTTTGTTAAGGAGATTTAGTTTTACTGCTTTGACTGGTGGGTCTCTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
3UTR CAA 72 bp AGTTTTCTGAGAGATTTCCCACACAGTTTTATAAAGTaGCTTCAGGTCATCAGGAATTTCTGGTATGCTCTG +
Preference number: 4 (lower is better)
Translates to: SFLRDFPHSFIK*LQVIRNFWYAL
Trigger: CAGAGCATACCAGAAATTCCTGATGACCTGAAGCAACTTTATAAAACTGTGTGGGAAATCTCTCAGAAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp AAACCCACTATACCTATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTCTTATACCATACTTTaGAATCTTCTCCTTGAGAAC +
Preference number: 4 (lower is better)
Translates to: KPTIPIYAQEVVWLLKTCSYTIL*NLLLEN
Trigger: GTTCTCAAGGAGAAGATTGCAAAGTATGGTATAAGA...GCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATAGGTATAGTGGGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp TTTGCTTCTAGAGACCCACCAGTCAAAGCAGTAAAACTAAATCTCCTTAACAAATTATTTAGAGTGAACTaGATTGGATTAGCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: FASRDPPVKAVKLNLLNKLFRVN*IGLAAG
Trigger: ACCAGCGGCTAATCCAATCCAGTTCACTCTAAATAA...TTTGTTAAGGAGATTTAGTTTTACTGCTTTGACTGGTGGGTCTCTAGAAGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CCA 90 bp GATAAAGGTCCTATCAGTACTTCTCATGAGTTATCACTCAGTTTTGCTTCTAGAAGTACTTTCAATTCATaGAGCATACCTTGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: DKGPISTSHELSLSFASRSTFNS*SIPCSH
Trigger: GTGGGAACAAGGTATGCTCCATGAATTGAAAGTACT...TCTAGAAGCAAAACTGAGTGATAACTCATGAGAAGTACTGATAGGACCTTTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533495.5
CDS-3UTR TCA 90 bp ATGAAACCTTACTTAACCACTCCCTGTATGCAAGATGACTTATTTTGCATTCCTCTTCCATCACATCACTaGACACTTTCTTTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: MKPYLTTPCMQDDLFCIPLPSHH*TLSLFL
Trigger: AAGAAACAAAGAAAGTGTTCAGTGATGTGATGGAAG...AGGAATGCAAAATAAGTCATCTTGCATACAGGGAGTGGTTAAGTAAGGTTTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300738.10
ENST00000532170.5
CDS-3UTR TCA 90 bp ATGAAACCTTACTTAACCACTCCCTGTATGCAAGATGACTTATTTTGCATTCCTTATCAGTACTTCTCATaGGTTATCACTCAGTTTTGC +
Preference number: 4 (lower is better)
Translates to: MKPYLTTPCMQDDLFCIPYQYFS*VITQFC
Trigger: GCAAAACTGAGTGATAACTCATGAGAAGTACTGATA...AGGAATGCAAAATAAGTCATCTTGCATACAGGGAGTGGTTAAGTAAGGTTTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp AGTTTTGCTTCTAGAGACCCACCAGTCAAAGCAGTAAAACTAAATCTCCTTAACATAGTTTCAAAGATCTaGTTATTCAGTAACTGGGCT +
Preference number: 4 (lower is better)
Translates to: SFASRDPPVKAVKLNLLNIVSKI*LFSNWA
Trigger: AGCCCAGTTACTGAATAAGCAGATCTTTGAAACTAT...GTTAAGGAGATTTAGTTTTACTGCTTTGACTGGTGGGTCTCTAGAAGCAAAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp TGGTATGCTCTGAATAGAGCCATTGCATGCAATAATCTGGTTTTTCATCTCTTCTCTTATACCATACTTTaGAATCTTCTCCTTGAGAAC +
Preference number: 4 (lower is better)
Translates to: WYALNRAIACNNLVFHLFSYTIL*NLLLEN
Trigger: GTTCTCAAGGAGAAGATTGCAAAGTATGGTATAAGA...GAAGAGATGAAAAACCAGATTATTGCATGCAATGGCTCTATTCAGAGCATACCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR GCA 90 bp TTTGCTTCTAGAGACCCACCAGTCAAAGCAGTAAAACTAAATCTCCTTAACAAAATAGTTTCAAAGATCTaGTTATTCAGTAACTGGGCT +
Preference number: 4 (lower is better)
Translates to: FASRDPPVKAVKLNLLNKIVSKI*LFSNWA
Trigger: AGCCCAGTTACTGAATAAGCAGATCTTTGAAACTAT...TTTGTTAAGGAGATTTAGTTTTACTGCTTTGACTGGTGGGTCTCTAGAAGCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS TCA 90 bp ACTCCGGTGAAGACTCCAAGATGGCGATCGCCACCTCGGACACCCTaGCTCAGCATTTCCGGGTTCACCTTTCCTGTTCCTGCCACCCCG +
Preference number: 5 (lower is better)
Translates to: TPVKTPRWRSPPRTP*LSISGFTFPVPATP
Trigger: CGGGGTGGCAGGAACAGGAAAGGTGAACCCGGAAATGCTGAGTCAGGGTGTCCGAGGTGGCGATCGCCATCTTGGAGTCTTCACCGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534285.5
CDS GCA 90 bp CCACTAGGGCGTGTCACACTCAGAAGCGTGAAACTCAACCGACCCTaGCCCTACCCTGACCACTCCTCACCCAGCATCCATAAAAGCACG +
Preference number: 5 (lower is better)
Translates to: PLGRVTLRSVKLNRP*PYPDHSSPSIHKST
Trigger: CGTGCTTTTATGGATGCTGGGTGAGGAGTGGTCAGGGTAGGGGCAGGGTCGGTTGAGTTTCACGCTTCTGAGTGTGACACGCCCTAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534285.5
CDS-3UTR CAA 90 bp TGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACCTATCTATGGGCCCTGCTCCTaGGCAAGGTCACAGCTGGCT +
Preference number: 5 (lower is better)
Translates to: CNRVQQSLTTSSKPTIPIYGPCS*ARSQLA
Trigger: AGCCAGCTGTGACCTTGCCAAGGAGCAGGGCCCATA...GATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp ACTCCTTTTGCCTGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCCCCAGGTTCTGCTGGTaGCTCTTTCGATTACAGGAA +
Preference number: 5 (lower is better)
Translates to: TPFACNRVQQSLTTSSKPPRFCW*LFRLQE
Trigger: TTCCTGTAATCGAAAGAGCAACCAGCAGAACCTGGG...GGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCAAAAGGAGT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp ACTCCTTTTGCCTGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCGAACAATATCCAATGTaGACTTGGCCACCATGGGAG +
Preference number: 5 (lower is better)
Translates to: TPFACNRVQQSLTTSSKPEQYPM*TWPPWE
Trigger: CTCCCATGGTGGCCAAGTCAACATTGGATATTGTTC...GGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCAAAAGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CAA 90 bp CTGCTGGTTGCTCTTTCGATTACAGGAATCTTTGTAGAGCATATACGGGGTGCCCGGTTGGTACCAGCATaGAAGAGAGTGGGCGAAGCA +
Preference number: 5 (lower is better)
Translates to: LLVALSITGIFVEHIRGARLVPA*KRVGEA
Trigger: TGCTTCGCCCACTCTCTTCAATGCTGGTACCAACCG...GGCACCCCGTATATGCTCTACAAAGATTCCTGTAATCGAAAGAGCAACCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CAA 90 bp GCTGGTTGCTCTTTCGATTACAGGAATCTTTGTAGAGCATATACGGGGTGCCTGCGGTTGGTACCAGCATaGAAGAGAGTGGGCGAAGCA +
Preference number: 5 (lower is better)
Translates to: AGCSFDYRNLCRAYTGCLRLVPA*KRVGEA
Trigger: TGCTTCGCCCACTCTCTTCAATGCTGGTACCAACCG...CAGGCACCCCGTATATGCTCTACAAAGATTCCTGTAATCGAAAGAGCAACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CAA 90 bp CCCAGTCTTCAAACCCTGCTTCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCAAAACAGCTAGAAAGTaGTGGGCGGTTGGTACCAGC +
Preference number: 5 (lower is better)
Translates to: PSLQTLLPAVEVHTSEFAKTARK*WAVGTS
Trigger: GCTGGTACCAACCGCCCACAACTTTCTAGCTGTTTT...GGCAAACTCACTAGTATGCACTTCTACGGCTGGAAGCAGGGTTTGAAGACTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CAA 90 bp TTGCCTGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACCCCAGGTTCTGCTGGTaGCTCTTTCGATTACAGGAA +
Preference number: 5 (lower is better)
Translates to: LPATGSSKALPPQANPLYPRFCW*LFRLQE
Trigger: TTCCTGTAATCGAAAGAGCAACCAGCAGAACCTGGG...GTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp TTTTGCCTGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATAGCATCTGCCAGACCTaGTACCCCAATTCCAATGGG +
Preference number: 5 (lower is better)
Translates to: FCLQQGPAKPYHLKQTHYSICQT*YPNSNG
Trigger: CCCATTGGAATTGGGGTACAAGGTCTGGCAGATGCT...ATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp TTAAATCAATTACTCCTTTTGCCTGCAACAGGGTCCAGCAAAGCCTTACCACCTTATGGGCCCTGCTCCTaGGCAAGGTCACAGCTGGCT +
Preference number: 5 (lower is better)
Translates to: LNQLLLLPATGSSKALPPYGPCS*ARSQLA
Trigger: AGCCAGCTGTGACCTTGCCAAGGAGCAGGGCCCATA...AGGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCAAAAGGAGTAATTGATTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp TGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTTCTATGGGCCCTGCTCCTaGGCAAGGTCACAGCTGGCT +
Preference number: 5 (lower is better)
Translates to: CSRSSLATEDMLVSSKSFYGPCS*ARSQLA
Trigger: AGCCAGCTGTGACCTTGCCAAGGAGCAGGGCCCATA...GAAAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR CAA 90 bp CACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAAAGATCTCTGGCTGGCGGCCATCTCGCTaGATCACATGCATCGCAGCT +
Preference number: 5 (lower is better)
Translates to: HSFHEEIRNPKSKEKISGWRPSR*ITCIAA
Trigger: AGCTGCGATGCATGTGATCAAGCGAGATGGCCGCCA...GCCAGAGATCTTTTCTTTGCTCTTTGGATTCCGGATCTCTTCATGAAACGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CAA 90 bp TTGCCTGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACGAACAATATCCAATGTaGACTTGGCCACCATGGGAG +
Preference number: 5 (lower is better)
Translates to: LPATGSSKALPPQANPLYEQYPM*TWPPWE
Trigger: CTCCCATGGTGGCCAAGTCAACATTGGATATTGTTC...GTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CAA 90 bp TGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACCTATCACGCTTGTTCCCACCTaGATCCACATATCGAGCTGT +
Preference number: 5 (lower is better)
Translates to: CNRVQQSLTTSSKPTIPITLVPT*IHISSC
Trigger: ACAGCTCGATATGTGGATCAAGGTGGGAACAAGCGT...GATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CAA 90 bp GAGCATATACGGGGTGCCTGTTTCCGTCTGAGACTCAATGATGGCATACCAAAGCCCAGGTTCTGCTGGTaGCTCTTTCGATTACAGGAA +
Preference number: 5 (lower is better)
Translates to: EHIRGACFRLRLNDGIPKPRFCW*LFRLQE
Trigger: TTCCTGTAATCGAAAGAGCAACCAGCAGAACCTGGG...CTTTGGTATGCCATCATTGAGTCTCAGACGGAAACAGGCACCCCGTATATGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp TACCACCTCAAGCAAACCCACTATACCTATCTATGCTCAAGAAGTAGTTTGGCTTATGGGCCCTGCTCCTaGGCAAGGTCACAGCTGGCT +
Preference number: 5 (lower is better)
Translates to: YHLKQTHYTYLCSRSSLAYGPCS*ARSQLA
Trigger: AGCCAGCTGTGACCTTGCCAAGGAGCAGGGCCCATA...AGCCAAACTACTTCTTGAGCATAGATAGGTATAGTGGGTTTGCTTGAGGTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp GCTAAAGGGGTGATGAAACCTTACTTAACCACTCCCTGTATGCAAGATGACTTATATGGGCCCTGCTCCTaGGCAAGGTCACAGCTGGCT +
Preference number: 5 (lower is better)
Translates to: AKGVMKPYLTTPCMQDDLYGPCS*ARSQLA
Trigger: AGCCAGCTGTGACCTTGCCAAGGAGCAGGGCCCATA...TAAGTCATCTTGCATACAGGGAGTGGTTAAGTAAGGTTTCATCACCCCTTTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp ACTCCTTTTGCCTGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCTGCTCAAGAAGTAGTTaGGCTACTGAAGACATGCTG +
Preference number: 5 (lower is better)
Translates to: TPFACNRVQQSLTTSSKPCSRSS*ATEDML
Trigger: CAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCA...GGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCAAAAGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp AAGCCTTACCACCTCAAGCAAACCCACTATACCTATCTATGCTCAAGAAGTAGTTGGCGGCCATCTCGCTaGATCACATGCATCGCAGCT +
Preference number: 5 (lower is better)
Translates to: KPYHLKQTHYTYLCSRSSWRPSR*ITCIAA
Trigger: AGCTGCGATGCATGTGATCAAGCGAGATGGCCGCCA...ACTACTTCTTGAGCATAGATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CAA 90 bp CTTCAGGTCATCAGGAATTTCTGGTATGCTCTGAATAGAGCCATTGCATGCAATTGGCGGCCATCTCGCTaGATCACATGCATCGCAGCT +
Preference number: 5 (lower is better)
Translates to: LQVIRNFWYALNRAIACNWRPSR*ITCIAA
Trigger: AGCTGCGATGCATGTGATCAAGCGAGATGGCCGCCA...ATTGCATGCAATGGCTCTATTCAGAGCATACCAGAAATTCCTGATGACCTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CAA 90 bp ATATTCAGGGCCAGGGAAGCCAAATTACAAACAGCAACCTCATCTTTGCTGGTGAGCATCTGCCAGACCTaGTACCCCAATTCCAATGGG +
Preference number: 5 (lower is better)
Translates to: IFRAREAKLQTATSSLLVSICQT*YPNSNG
Trigger: CCCATTGGAATTGGGGTACAAGGTCTGGCAGATGCT...CACCAGCAAAGATGAGGTTGCTGTTTGTAATTTGGCTTCCCTGGCCCTGAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp GCCAGACCTTGTACCCCAATTCCAATGGGGCGATGGCGTTTATTTGATAGGCATAATCAATTACTCCTTTaGCCTGCAACAGGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: ARPCTPIPMGRWRLFDRHNQLLL*PATGSS
Trigger: GCTGGACCCTGTTGCAGGCAAAAGGAGTAATTGATT...ATGCCTATCAAATAAACGCCATCGCCCCATTGGAATTGGGGTACAAGGTCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp TATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTCGGTTGGTACCAGCATaGAAGAGAGTGGGCGAAGCA +
Preference number: 5 (lower is better)
Translates to: YAQEVVWLLKTCWSLPSLRLVPA*KRVGEA
Trigger: TGCTTCGCCCACTCTCTTCAATGCTGGTACCAACCG...AAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CAA 90 bp TCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACCTATCTATGCTCAAGGAAAGTTGTGGGCGGTaGGTACCAGCATTGAAGAGA +
Preference number: 5 (lower is better)
Translates to: SSKALPPQANPLYLSMLKESCGR*VPALKR
Trigger: TCTCTTCAATGCTGGTACCAACCGCCCACAACTTTC...CTTGAGCATAGATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CAA 90 bp GCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTTCCACGCTTGTTCCCACCTaGATCCACATATCGAGCTGT +
Preference number: 5 (lower is better)
Translates to: AQEVVWLLKTCWSLPSLSTLVPT*IHISSC
Trigger: ACAGCTCGATATGTGGATCAAGGTGGGAACAAGCGT...GGAAAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000534285.5
CDS-3UTR CAA 90 bp CTGCTGGTTGCTCTTTCGATTACAGGAATCTTTGTAGAGCATATACGGGGTGCCGACCAGGACACTCATTaGGACACATCAAAGACCAGT +
Preference number: 5 (lower is better)
Translates to: LLVALSITGIFVEHIRGADQDTH*DTSKTS
Trigger: ACTGGTCTTTGATGTGTCCAAATGAGTGTCCTGGTC...GGCACCCCGTATATGCTCTACAAAGATTCCTGTAATCGAAAGAGCAACCAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp TTGGCCAGAACAATATCCAATGTTGACTTGGCCACCATGGGAGAGTGTTTGCCAGACCAGGACACTCATTaGGACACATCAAAGACCAGT +
Preference number: 5 (lower is better)
Translates to: LARTISNVDLATMGECLPDQDTH*DTSKTS
Trigger: ACTGGTCTTTGATGTGTCCAAATGAGTGTCCTGGTC...TGGCAAACACTCTCCCATGGTGGCCAAGTCAACATTGGATATTGTTCTGGCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CAA 90 bp GTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTTCCTCAGGATCCACAGACCAGGACACTCATTaGGACACATCAAAGACCAGT +
Preference number: 5 (lower is better)
Translates to: VWLLKTCWSLPSLSSGSTDQDTH*DTSKTS
Trigger: ACTGGTCTTTGATGTGTCCAAATGAGTGTCCTGGTC...TGTGGATCCTGAGGAAAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp GCTGCATTTGATGGTTCCCAGGTTCTGCTGGTTGCTCTTTCGATTACAGGAATCATTTCTGTGCACAGGTaGCTGCATTTGATGGTTCCC +
Preference number: 5 (lower is better)
Translates to: AAFDGSQVLLVALSITGIISVHR*LHLMVP
Trigger: GGGAACCATCAAATGCAGCAACCTGTGCACAGAAAT...GATTCCTGTAATCGAAAGAGCAACCAGCAGAACCTGGGAACCATCAAATGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp CTGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACCTATACAGCAACCTCATCTTaGCTGGTGTACTCCACTATT +
Preference number: 5 (lower is better)
Translates to: LQQGPAKPYHLKQTHYTYTATSS*LVYSTI
Trigger: AATAGTGGAGTACACCAGCAAAGATGAGGTTGCTGT...ATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp TTTGTAGAGCATATACGGGGTGCCTGTTTCCGTCTGAGACTCAATGATGGCATAGGCGATGGCGTTTATTaGATAGGCATGCCTCTGGTA +
Preference number: 5 (lower is better)
Translates to: FVEHIRGACFRLRLNDGIGDGVY*IGMPLV
Trigger: TACCAGAGGCATGCCTATCAAATAAACGCCATCGCC...TATGCCATCATTGAGTCTCAGACGGAAACAGGCACCCCGTATATGCTCTACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp GGAATCCAAAGAGCAAAGAAAAGATCTCTGGCACGCTGCTCTTCCTTTCCTGTGTACCTTGTTCCCACCTaGATCCACATATCGAGCTGT +
Preference number: 5 (lower is better)
Translates to: GIQRAKKRSLARCSSFPVYLVPT*IHISSC
Trigger: ACAGCTCGATATGTGGATCAAGGTGGGAACAAGGTA...CACAGGAAAGGAAGAGCAGCGTGCCAGAGATCTTTTCTTTGCTCTTTGGATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533495.5
CDS CCA 90 bp AAGTGTGAAACTTGTTATTTGACTTCGTTTTTGGTTCACAGTGATTaGACTCCGGTGAAGACTCCAAGATGGCGATCGCCACCTCGGACA +
Preference number: 5 (lower is better)
Translates to: KCETCYLTSFLVHSD*TPVKTPRWRSPPRT
Trigger: TGTCCGAGGTGGCGATCGCCATCTTGGAGTCTTCACCGGAGTCCAATCACTGTGAACCAAAAACGAAGTCAAATAACAAGTTTCACACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533495.5
ENST00000534285.5
CDS-3UTR CAA 90 bp TCCTTGAGAACCTTCCAGTCCCATAGGTCTGTAGGAGTAACATTCCACATATCAAAACATGACTCGTTCTaGGCGGCCATCTCGCTTGAT +
Preference number: 5 (lower is better)
Translates to: SLRTFQSHRSVGVTFHISKHDSF*AAISLD
Trigger: ATCAAGCGAGATGGCCGCCAAGAACGAGTCATGTTT...TGATATGTGGAATGTTACTCCTACAGACCTATGGGACTGGAAGGTTCTCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CAA 90 bp CTGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACCTATACCATGGGAGAGTGTTaGCCATTATGTGGATTTATG +
Preference number: 5 (lower is better)
Translates to: LQQGPAKPYHLKQTHYTYTMGEC*PLCGFM
Trigger: CATAAATCCACATAATGGCAAACACTCTCCCATGGT...ATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CAA 90 bp GCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTTCCATATCCAATGTTGACTaGGCCACCATGGGAGAGTGT +
Preference number: 5 (lower is better)
Translates to: AQEVVWLLKTCWSLPSLSISNVD*ATMGEC
Trigger: ACACTCTCCCATGGTGGCCAAGTCAACATTGGATAT...GGAAAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CAA 90 bp ACACATCAAAGACCAGTCCTGATTAGTCTCCACTCGTTTCATGAAGAGATCCGGATATCCAATGTTGACTaGGCCACCATGGGAGAGTGT +
Preference number: 5 (lower is better)
Translates to: THQRPVLISLHSFHEEIRISNVD*ATMGEC
Trigger: ACACTCTCCCATGGTGGCCAAGTCAACATTGGATAT...CCGGATCTCTTCATGAAACGAGTGGAGACTAATCAGGACTGGTCTTTGATGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CAA 90 bp TGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACCTATCGCATCAATGTCTTCTTaGTGGATCCCAACAGATACT +
Preference number: 5 (lower is better)
Translates to: CNRVQQSLTTSSKPTIPIASMSS*WIPTDT
Trigger: AGTATCTGTTGGGATCCACAAAGAAGACATTGATGC...GATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CAA 90 bp CTCATCTTTGCTGGTGTACTCCACTATTTCTGTGCACAGGTTGCTGCATTTGATGAAAGTTGTGGGCGGTaGGTACCAGCATTGAAGAGA +
Preference number: 5 (lower is better)
Translates to: LIFAGVLHYFCAQVAAFDESCGR*VPALKR
Trigger: TCTCTTCAATGCTGGTACCAACCGCCCACAACTTTC...ATCAAATGCAGCAACCTGTGCACAGAAATAGTGGAGTACACCAGCAAAGATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CAA 90 bp GTCCTGATTAGTCTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAAAAACAGCTAGAAAGTaGTGGGCGGTTGGTACCAGC +
Preference number: 5 (lower is better)
Translates to: VLISLHSFHEEIRNPKSKKTARK*WAVGTS
Trigger: GCTGGTACCAACCGCCCACAACTTTCTAGCTGTTTT...TTTGCTCTTTGGATTCCGGATCTCTTCATGAAACGAGTGGAGACTAATCAGGAC
47% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CAA 90 bp TTAAATCAATTACTCCTTTTGCCTGCAACAGGGTCCAGCAAAGCCTTACCACCTAAAACAGCTAGAAAGTaGTGGGCGGTTGGTACCAGC +
Preference number: 5 (lower is better)
Translates to: LNQLLLLPATGSSKALPPKTARK*WAVGTS
Trigger: GCTGGTACCAACCGCCCACAACTTTCTAGCTGTTTT...AGGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCAAAAGGAGTAATTGATTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CAA 90 bp TTCGATTACAGGAATCTTTGTAGAGCATATACGGGGTGCCTGTTTCCGTCTGAGACAAGGCCATTGGAATaGCCATTAGTCCCAGCAATG +
Preference number: 5 (lower is better)
Translates to: FDYRNLCRAYTGCLFPSETRPLE*PLVPAM
Trigger: CATTGCTGGGACTAATGGCAATTCCAATGGCCTTGT...CTCAGACGGAAACAGGCACCCCGTATATGCTCTACAAAGATTCCTGTAATCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp ATTACAGGAATCTTTGTAGAGCATATACGGGGTGCCTGTTTCCGTCTGAGACTCACAAGGCCATTGGAATaGCCATTAGTCCCAGCAATG +
Preference number: 5 (lower is better)
Translates to: ITGIFVEHIRGACFRLRLTRPLE*PLVPAM
Trigger: CATTGCTGGGACTAATGGCAATTCCAATGGCCTTGT...GAGTCTCAGACGGAAACAGGCACCCCGTATATGCTCTACAAAGATTCCTGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp ACACATCAAAGACCAGTCCTGATTAGTCTCCACTCGTTTCATGAAGAGATCCGGATCGGTACAAGGCCATaGGAATTGCCATTAGTCCCA +
Preference number: 5 (lower is better)
Translates to: THQRPVLISLHSFHEEIRIGTRP*ELPLVP
Trigger: TGGGACTAATGGCAATTCCAATGGCCTTGTACCGAT...CCGGATCTCTTCATGAAACGAGTGGAGACTAATCAGGACTGGTCTTTGATGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp ATTACAGGAATCTTTGTAGAGCATATACGGGGTGCCTGTTTCCGTCTGAGACTCATCGGTACAAGGCCATaGGAATTGCCATTAGTCCCA +
Preference number: 5 (lower is better)
Translates to: ITGIFVEHIRGACFRLRLIGTRP*ELPLVP
Trigger: TGGGACTAATGGCAATTCCAATGGCCTTGTACCGAT...GAGTCTCAGACGGAAACAGGCACCCCGTATATGCTCTACAAAGATTCCTGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp TACAGGAATCTTTGTAGAGCATATACGGGGTGCCTGTTTCCGTCTGAGACTCAAATCGGTACAAGGCCATaGGAATTGCCATTAGTCCCA +
Preference number: 5 (lower is better)
Translates to: YRNLCRAYTGCLFPSETQIGTRP*ELPLVP
Trigger: TGGGACTAATGGCAATTCCAATGGCCTTGTACCGAT...TTGAGTCTCAGACGGAAACAGGCACCCCGTATATGCTCTACAAAGATTCCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp TGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTTCCCCAGGTTCTGCTGGTaGCTCTTTCGATTACAGGAA +
Preference number: 5 (lower is better)
Translates to: CSRSSLATEDMLVSSKSFPRFCW*LFRLQE
Trigger: TTCCTGTAATCGAAAGAGCAACCAGCAGAACCTGGG...GAAAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR CAA 90 bp GCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTTCCATTTCTGTGCACAGGTaGCTGCATTTGATGGTTCCC +
Preference number: 5 (lower is better)
Translates to: AQEVVWLLKTCWSLPSLSISVHR*LHLMVP
Trigger: GGGAACCATCAAATGCAGCAACCTGTGCACAGAAAT...GGAAAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR CAA 90 bp GTGACATACATATTCAGGGCCAGGGAAGCCAAATTACAAACAGCAACCTCATCTGGCGATGGCGTTTATTaGATAGGCATGCCTCTGGTA +
Preference number: 5 (lower is better)
Translates to: VTYIFRAREAKLQTATSSGDGVY*IGMPLV
Trigger: TACCAGAGGCATGCCTATCAAATAAACGCCATCGCC...AGATGAGGTTGCTGTTTGTAATTTGGCTTCCCTGGCCCTGAATATGTATGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp CCTATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAGGCGATGGCGTTTATTaGATAGGCATGCCTCTGGTA +
Preference number: 5 (lower is better)
Translates to: PIYAQEVVWLLKTCWSLPGDGVY*IGMPLV
Trigger: TACCAGAGGCATGCCTATCAAATAAACGCCATCGCC...TGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR CAA 90 bp TATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGAGCATCTGCCAGACCTaGTACCCCAATTCCAATGGG +
Preference number: 5 (lower is better)
Translates to: YLCSRSSLATEDMLVSSKSICQT*YPNSNG
Trigger: CCCATTGGAATTGGGGTACAAGGTCTGGCAGATGCT...CTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR CAA 90 bp TATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTAGCATCTGCCAGACCTaGTACCCCAATTCCAATGGG +
Preference number: 5 (lower is better)
Translates to: YAQEVVWLLKTCWSLPSLSICQT*YPNSNG
Trigger: CCCATTGGAATTGGGGTACAAGGTCTGGCAGATGCT...AAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR CAA 90 bp GGAATCCAAAGAGCAAAGAAAAGATCTCTGGCACGCTGCTCTTCCTTTCCTGTGTGCTCAAGAAGTAGTTaGGCTACTGAAGACATGCTG +
Preference number: 5 (lower is better)
Translates to: GIQRAKKRSLARCSSFPVCSRSS*ATEDML
Trigger: CAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCA...CACAGGAAAGGAAGAGCAGCGTGCCAGAGATCTTTTCTTTGCTCTTTGGATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp TTTGTAGAGCATATACGGGGTGCCTGTTTCCGTCTGAGACTCAATGATGGCATAAATCAATTACTCCTTTaGCCTGCAACAGGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: FVEHIRGACFRLRLNDGINQLLL*PATGSS
Trigger: GCTGGACCCTGTTGCAGGCAAAAGGAGTAATTGATT...TATGCCATCATTGAGTCTCAGACGGAAACAGGCACCCCGTATATGCTCTACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS CCA 90 bp ATGCCCCAGGACGCTTTAGTTCTGATTTCCAGTACTTTCAATTCATaGAGCATACCTTGTTCCCACCTTGATCCACATATCGAGCTGTGT +
Preference number: 5 (lower is better)
Translates to: MPQDALVLISSTFNS*SIPCSHLDPHIELC
Trigger: ACACAGCTCGATATGTGGATCAAGGTGGGAACAAGGTATGCTCCATGAATTGAAAGTACTGGAAATCAGAACTAAAGCGTCCTGGGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533495.5
CDS-3UTR CAA 90 bp TCTCATGAGTTATCACTCAGTTTTGCTTCTAGAGACCCACCAGTCAAAGCAGTAAAACATGACTCGTTCTaGGCGGCCATCTCGCTTGAT +
Preference number: 5 (lower is better)
Translates to: SHELSLSFASRDPPVKAVKHDSF*AAISLD
Trigger: ATCAAGCGAGATGGCCGCCAAGAACGAGTCATGTTT...TACTGCTTTGACTGGTGGGTCTCTAGAAGCAAAACTGAGTGATAACTCATGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CAA 90 bp GTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACCTATCTATGCTCAACCCACTGTACAAGCCTaGGATTACTTTCATGGTGAT +
Preference number: 5 (lower is better)
Translates to: VQQSLTTSSKPTIPIYAQPTVQA*DYFHGD
Trigger: ATCACCATGAAAGTAATCCAAGGCTTGTACAGTGGG...TTGAGCATAGATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300738.10
ENST00000532170.5
CDS-3UTR CAA 90 bp AGTTTTGCTTCTAGAGACCCACCAGTCAAAGCAGTAAAACTAAATCTCCTTAACCGGTTGGTACCAGCATaGAAGAGAGTGGGCGAAGCA +
Preference number: 5 (lower is better)
Translates to: SFASRDPPVKAVKLNLLNRLVPA*KRVGEA
Trigger: TGCTTCGCCCACTCTCTTCAATGCTGGTACCAACCG...GTTAAGGAGATTTAGTTTTACTGCTTTGACTGGTGGGTCTCTAGAAGCAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CAA 90 bp TCTCATGAGTTATCACTCAGTTTTGCTTCTAGAGACCCACCAGTCAAAGCAGTAGAAAGTTGTGGGCGGTaGGTACCAGCATTGAAGAGA +
Preference number: 5 (lower is better)
Translates to: SHELSLSFASRDPPVKAVESCGR*VPALKR
Trigger: TCTCTTCAATGCTGGTACCAACCGCCCACAACTTTC...TACTGCTTTGACTGGTGGGTCTCTAGAAGCAAAACTGAGTGATAACTCATGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CAA 90 bp TATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTAAAACAGCTAGAAAGTaGTGGGCGGTTGGTACCAGC +
Preference number: 5 (lower is better)
Translates to: YAQEVVWLLKTCWSLPSLKTARK*WAVGTS
Trigger: GCTGGTACCAACCGCCCACAACTTTCTAGCTGTTTT...AAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CAA 90 bp CTCATCTTTGCTGGTGTACTCCACTATTTCTGTGCACAGGTTGCTGCATTTGATACAAGGCCATTGGAATaGCCATTAGTCCCAGCAATG +
Preference number: 5 (lower is better)
Translates to: LIFAGVLHYFCAQVAAFDTRPLE*PLVPAM
Trigger: CATTGCTGGGACTAATGGCAATTCCAATGGCCTTGT...ATCAAATGCAGCAACCTGTGCACAGAAATAGTGGAGTACACCAGCAAAGATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp CCTATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAATCGGTACAAGGCCATaGGAATTGCCATTAGTCCCA +
Preference number: 5 (lower is better)
Translates to: PIYAQEVVWLLKTCWSLPIGTRP*ELPLVP
Trigger: TGGGACTAATGGCAATTCCAATGGCCTTGTACCGAT...TGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR CAA 90 bp CTGCAACAGGGTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACCTATACATATCGAGCTGTGTaGTTATATACTCTCAGCATC +
Preference number: 5 (lower is better)
Translates to: LQQGPAKPYHLKQTHYTYTYRAV*LYTLSI
Trigger: GATGCTGAGAGTATATAACAACACAGCTCGATATGT...ATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp GGTGCCTGTTTCCGTCTGAGACTCAATGATGGCATACCAAAGCTGCTGAGCTTTACATATCGAGCTGTGTaGTTATATACTCTCAGCATC +
Preference number: 5 (lower is better)
Translates to: GACFRLRLNDGIPKLLSFTYRAV*LYTLSI
Trigger: GATGCTGAGAGTATATAACAACACAGCTCGATATGT...AAAGCTCAGCAGCTTTGGTATGCCATCATTGAGTCTCAGACGGAAACAGGCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp CTGATTAGTCTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAACGCTTGTTCCCACCTaGATCCACATATCGAGCTGT +
Preference number: 5 (lower is better)
Translates to: LISLHSFHEEIRNPKSKETLVPT*IHISSC
Trigger: ACAGCTCGATATGTGGATCAAGGTGGGAACAAGCGT...TTCTTTGCTCTTTGGATTCCGGATCTCTTCATGAAACGAGTGGAGACTAATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CAA 90 bp TATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGACGCTTGTTCCCACCTaGATCCACATATCGAGCTGT +
Preference number: 5 (lower is better)
Translates to: YLCSRSSLATEDMLVSSKTLVPT*IHISSC
Trigger: ACAGCTCGATATGTGGATCAAGGTGGGAACAAGCGT...CTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000534285.5
CDS-3UTR CAA 90 bp CCTATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAGACCAGGACACTCATTaGGACACATCAAAGACCAGT +
Preference number: 5 (lower is better)
Translates to: PIYAQEVVWLLKTCWSLPDQDTH*DTSKTS
Trigger: ACTGGTCTTTGATGTGTCCAAATGAGTGTCCTGGTC...TGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR CAA 90 bp CTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTGACCAGGACACTCATTaGGACACATCAAAGACCAGT +
Preference number: 5 (lower is better)
Translates to: LCSRSSLATEDMLVSSKSDQDTH*DTSKTS
Trigger: ACTGGTCTTTGATGTGTCCAAATGAGTGTCCTGGTC...AGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR CAA 90 bp TTGCTGGTGTACTCCACTATTTCTGTGCACAGGTTGCTGCATTTGATGGTTCCCTTTGCGGACACGACCTaGTTTCTCATAACTTGCATA +
Preference number: 5 (lower is better)
Translates to: LLVYSTISVHRLLHLMVPFADTT*FLITCI
Trigger: TATGCAAGTTATGAGAAACAAGGTCGTGTCCGCAAA...GGGAACCATCAAATGCAGCAACCTGTGCACAGAAATAGTGGAGTACACCAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp CACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAAAGATCTCTGGCATTTCTGTGCACAGGTaGCTGCATTTGATGGTTCCC +
Preference number: 5 (lower is better)
Translates to: HSFHEEIRNPKSKEKISGISVHR*LHLMVP
Trigger: GGGAACCATCAAATGCAGCAACCTGTGCACAGAAAT...GCCAGAGATCTTTTCTTTGCTCTTTGGATTCCGGATCTCTTCATGAAACGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp GCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTTCCACAGCAACCTCATCTTaGCTGGTGTACTCCACTATT +
Preference number: 5 (lower is better)
Translates to: AQEVVWLLKTCWSLPSLSTATSS*LVYSTI
Trigger: AATAGTGGAGTACACCAGCAAAGATGAGGTTGCTGT...GGAAAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR CAA 90 bp TATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGGGCGATGGCGTTTATTaGATAGGCATGCCTCTGGTA +
Preference number: 5 (lower is better)
Translates to: YLCSRSSLATEDMLVSSKGDGVY*IGMPLV
Trigger: TACCAGAGGCATGCCTATCAAATAAACGCCATCGCC...CTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR CAA 90 bp ATACATATTCAGGGCCAGGGAAGCCAAATTACAAACAGCAACCTCATCTTTGCTGGCGATGGCGTTTATTaGATAGGCATGCCTCTGGTA +
Preference number: 5 (lower is better)
Translates to: IHIQGQGSQITNSNLIFAGDGVY*IGMPLV
Trigger: TACCAGAGGCATGCCTATCAAATAAACGCCATCGCC...AGCAAAGATGAGGTTGCTGTTTGTAATTTGGCTTCCCTGGCCCTGAATATGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp TTCGATTACAGGAATCTTTGTAGAGCATATACGGGGTGCCTGTTTCCGTCTGAGTGCTCAAGAAGTAGTTaGGCTACTGAAGACATGCTG +
Preference number: 5 (lower is better)
Translates to: FDYRNLCRAYTGCLFPSECSRSS*ATEDML
Trigger: CAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCA...CTCAGACGGAAACAGGCACCCCGTATATGCTCTACAAAGATTCCTGTAATCGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp TGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTTCAATCAATTACTCCTTTaGCCTGCAACAGGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: CSRSSLATEDMLVSSKSFNQLLL*PATGSS
Trigger: GCTGGACCCTGTTGCAGGCAAAAGGAGTAATTGATT...GAAAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp CCTATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAATCAATTACTCCTTTaGCCTGCAACAGGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: PIYAQEVVWLLKTCWSLPNQLLL*PATGSS
Trigger: GCTGGACCCTGTTGCAGGCAAAAGGAGTAATTGATT...TGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp CACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAAAGATCTCTGGCTCTCTTGTTCCCACCTaGATCCACATATCGAGCTGT +
Preference number: 5 (lower is better)
Translates to: HSFHEEIRNPKSKEKISGSLVPT*IHISSC
Trigger: ACAGCTCGATATGTGGATCAAGGTGGGAACAAGAGA...GCCAGAGATCTTTTCTTTGCTCTTTGGATTCCGGATCTCTTCATGAAACGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528442.5
CDS-3UTR CAA 90 bp TCTCATGAGTTATCACTCAGTTTTGCTTCTAGAGACCCACCAGTCAAAGCAGTAATATCCAATGTTGACTaGGCCACCATGGGAGAGTGT +
Preference number: 5 (lower is better)
Translates to: SHELSLSFASRDPPVKAVISNVD*ATMGEC
Trigger: ACACTCTCCCATGGTGGCCAAGTCAACATTGGATAT...TACTGCTTTGACTGGTGGGTCTCTAGAAGCAAAACTGAGTGATAACTCATGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CAA 90 bp TATCCAATGTTGACTTGGCCACCATGGGAGAGTGTTTGCCATTATGTGGATTTAGAACAATATCCAATGTaGACTTGGCCACCATGGGAG +
Preference number: 5 (lower is better)
Translates to: YPMLTWPPWESVCHYVDLEQYPM*TWPPWE
Trigger: CTCCCATGGTGGCCAAGTCAACATTGGATATTGTTC...TAAATCCACATAATGGCAAACACTCTCCCATGGTGGCCAAGTCAACATTGGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CAA 90 bp TCAAGCAAACCCACTATACCTATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGGAAAGTTGTGGGCGGTaGGTACCAGCATTGAAGAGA +
Preference number: 5 (lower is better)
Translates to: SSKPTIPIYAQEVVWLLKESCGR*VPALKR
Trigger: TCTCTTCAATGCTGGTACCAACCGCCCACAACTTTC...CTTCAGTAGCCAAACTACTTCTTGAGCATAGATAGGTATAGTGGGTTTGCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CAA 90 bp TATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGACAAGGCCATTGGAATaGCCATTAGTCCCAGCAATG +
Preference number: 5 (lower is better)
Translates to: YLCSRSSLATEDMLVSSKTRPLE*PLVPAM
Trigger: CATTGCTGGGACTAATGGCAATTCCAATGGCCTTGT...CTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR CAA 90 bp TCTCATGAGTTATCACTCAGTTTTGCTTCTAGAGACCCACCAGTCAAAGCAGTAACAAGGCCATTGGAATaGCCATTAGTCCCAGCAATG +
Preference number: 5 (lower is better)
Translates to: SHELSLSFASRDPPVKAVTRPLE*PLVPAM
Trigger: CATTGCTGGGACTAATGGCAATTCCAATGGCCTTGT...TACTGCTTTGACTGGTGGGTCTCTAGAAGCAAAACTGAGTGATAACTCATGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp TATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTACAAGGCCATTGGAATaGCCATTAGTCCCAGCAATG +
Preference number: 5 (lower is better)
Translates to: YAQEVVWLLKTCWSLPSLTRPLE*PLVPAM
Trigger: CATTGCTGGGACTAATGGCAATTCCAATGGCCTTGT...AAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR CAA 90 bp CTGCTGGTTGCTCTTTCGATTACAGGAATCTTTGTAGAGCATATACGGGGTGCCACATATCGAGCTGTGTaGTTATATACTCTCAGCATC +
Preference number: 5 (lower is better)
Translates to: LLVALSITGIFVEHIRGATYRAV*LYTLSI
Trigger: GATGCTGAGAGTATATAACAACACAGCTCGATATGT...GGCACCCCGTATATGCTCTACAAAGATTCCTGTAATCGAAAGAGCAACCAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp GTCCAGCAAAGCCTTACCACCTCAAGCAAACCCACTATACCTATCTATGCTCAATTTGCGGACACGACCTaGTTTCTCATAACTTGCATA +
Preference number: 5 (lower is better)
Translates to: VQQSLTTSSKPTIPIYAQFADTT*FLITCI
Trigger: TATGCAAGTTATGAGAAACAAGGTCGTGTCCGCAAA...TTGAGCATAGATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp ATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTATTTCTGTGCACAGGTaGCTGCATTTGATGGTTCCC +
Preference number: 5 (lower is better)
Translates to: IYAQEVVWLLKTCWSLPSISVHR*LHLMVP
Trigger: GGGAACCATCAAATGCAGCAACCTGTGCACAGAAAT...ACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR CAA 90 bp GCCAAATTACAAACAGCAACCTCATCTTTGCTGGTGTACTCCACTATTTCTGTGATTTCTGTGCACAGGTaGCTGCATTTGATGGTTCCC +
Preference number: 5 (lower is better)
Translates to: AKLQTATSSLLVYSTISVISVHR*LHLMVP
Trigger: GGGAACCATCAAATGCAGCAACCTGTGCACAGAAAT...CACAGAAATAGTGGAGTACACCAGCAAAGATGAGGTTGCTGTTTGTAATTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp TCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAAAGATCTCTGGCACGACAGCAACCTCATCTTaGCTGGTGTACTCCACTATT +
Preference number: 5 (lower is better)
Translates to: SFHEEIRNPKSKEKISGTTATSS*LVYSTI
Trigger: AATAGTGGAGTACACCAGCAAAGATGAGGTTGCTGT...CGTGCCAGAGATCTTTTCTTTGCTCTTTGGATTCCGGATCTCTTCATGAAACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp CTCATCTTTGCTGGTGTACTCCACTATTTCTGTGCACAGGTTGCTGCATTTGATTTTGCAATCTTCTCCTaGAGAACCTTCCAGTCCCAT +
Preference number: 5 (lower is better)
Translates to: LIFAGVLHYFCAQVAAFDFAIFS*RTFQSH
Trigger: ATGGGACTGGAAGGTTCTCAAGGAGAAGATTGCAAA...ATCAAATGCAGCAACCTGTGCACAGAAATAGTGGAGTACACCAGCAAAGATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp CCTATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCATTTGCAATCTTCTCCTaGAGAACCTTCCAGTCCCAT +
Preference number: 5 (lower is better)
Translates to: PIYAQEVVWLLKTCWSLPFAIFS*RTFQSH
Trigger: ATGGGACTGGAAGGTTCTCAAGGAGAAGATTGCAAA...TGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR CAA 90 bp ACCAGGACACTCATTTGGACACATCAAAGACCAGTCCTGATTAGTCTCCACTCGGTGGATGTTCAAAGATaGGCTTTGATCAATGAAAGC +
Preference number: 5 (lower is better)
Translates to: TRTLIWTHQRPVLISLHSVDVQR*ALINES
Trigger: GCTTTCATTGATCAAAGCCAATCTTTGAACATCCAC...CGAGTGGAGACTAATCAGGACTGGTCTTTGATGTGTCCAAATGAGTGTCCTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp GGTTGCTCTTTCGATTACAGGAATCTTTGTAGAGCATATACGGGGTGCCTGTTTTGCTCAAGAAGTAGTTaGGCTACTGAAGACATGCTG +
Preference number: 5 (lower is better)
Translates to: GCSFDYRNLCRAYTGCLFCSRSS*ATEDML
Trigger: CAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCA...AAACAGGCACCCCGTATATGCTCTACAAAGATTCCTGTAATCGAAAGAGCAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp CCTATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCATGCTCAAGAAGTAGTTaGGCTACTGAAGACATGCTG +
Preference number: 5 (lower is better)
Translates to: PIYAQEVVWLLKTCWSLPCSRSS*ATEDML
Trigger: CAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCA...TGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR CAA 90 bp GCTAAAGGGGTGATGAAACCTTACTTAACCACTCCCTGTATGCAAGATGACTTACCCACTGTACAAGCCTaGGATTACTTTCATGGTGAT +
Preference number: 5 (lower is better)
Translates to: AKGVMKPYLTTPCMQDDLPTVQA*DYFHGD
Trigger: ATCACCATGAAAGTAATCCAAGGCTTGTACAGTGGG...TAAGTCATCTTGCATACAGGGAGTGGTTAAGTAAGGTTTCATCACCCCTTTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300738.10
ENST00000532170.5
CDS-3UTR CAA 90 bp CTCATCTTTGCTGGTGTACTCCACTATTTCTGTGCACAGGTTGCTGCATTTGATACCATGGGAGAGTGTTaGCCATTATGTGGATTTATG +
Preference number: 5 (lower is better)
Translates to: LIFAGVLHYFCAQVAAFDTMGEC*PLCGFM
Trigger: CATAAATCCACATAATGGCAAACACTCTCCCATGGT...ATCAAATGCAGCAACCTGTGCACAGAAATAGTGGAGTACACCAGCAAAGATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CAA 90 bp TATACCTATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTATCGGTACAAGGCCATaGGAATTGCCATTAGTCCCA +
Preference number: 5 (lower is better)
Translates to: YTYLCSRSSLATEDMLVSIGTRP*ELPLVP
Trigger: TGGGACTAATGGCAATTCCAATGGCCTTGTACCGAT...AGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATAGGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp CACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAAAGATCTCTGGCTTTGCGGACACGACCTaGTTTCTCATAACTTGCATA +
Preference number: 5 (lower is better)
Translates to: HSFHEEIRNPKSKEKISGFADTT*FLITCI
Trigger: TATGCAAGTTATGAGAAACAAGGTCGTGTCCGCAAA...GCCAGAGATCTTTTCTTTGCTCTTTGGATTCCGGATCTCTTCATGAAACGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp ATCTGCTTATTCAGTAACTGGGCTTCTGCACTCTCAAAAGGGTATCTCATCAGGTTTGCGGACACGACCTaGTTTCTCATAACTTGCATA +
Preference number: 5 (lower is better)
Translates to: ICLFSNWASALSKGYLIRFADTT*FLITCI
Trigger: TATGCAAGTTATGAGAAACAAGGTCGTGTCCGCAAA...CCTGATGAGATACCCTTTTGAGAGTGCAGAAGCCCAGTTACTGAATAAGCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp CTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTTTGCGGACACGACCTaGTTTCTCATAACTTGCATA +
Preference number: 5 (lower is better)
Translates to: LCSRSSLATEDMLVSSKSFADTT*FLITCI
Trigger: TATGCAAGTTATGAGAAACAAGGTCGTGTCCGCAAA...AGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR CAA 90 bp TCTAGAGACCCACCAGTCAAAGCAGTAAAACTAAATCTCCTTAACAAAACTGAAAGCATCTGCCAGACCTaGTACCCCAATTCCAATGGG +
Preference number: 5 (lower is better)
Translates to: SRDPPVKAVKLNLLNKTESICQT*YPNSNG
Trigger: CCCATTGGAATTGGGGTACAAGGTCTGGCAGATGCT...TTCAGTTTTGTTAAGGAGATTTAGTTTTACTGCTTTGACTGGTGGGTCTCTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp AAGCCTTACCACCTCAAGCAAACCCACTATACCTATCTATGCTCAAGAAGTAGTTTTGCAATCTTCTCCTaGAGAACCTTCCAGTCCCAT +
Preference number: 5 (lower is better)
Translates to: KPYHLKQTHYTYLCSRSSFAIFS*RTFQSH
Trigger: ATGGGACTGGAAGGTTCTCAAGGAGAAGATTGCAAA...ACTACTTCTTGAGCATAGATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp TATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTTTTGCAATCTTCTCCTaGAGAACCTTCCAGTCCCAT +
Preference number: 5 (lower is better)
Translates to: YAQEVVWLLKTCWSLPSLFAIFS*RTFQSH
Trigger: ATGGGACTGGAAGGTTCTCAAGGAGAAGATTGCAAA...AAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR CAA 90 bp ATACATATTCAGGGCCAGGGAAGCCAAATTACAAACAGCAACCTCATCTTTGCTTCAGAAGAAAACAGCTaGGCCTCCCAAAGTGTGAAA +
Preference number: 5 (lower is better)
Translates to: IHIQGQGSQITNSNLIFASEENS*ASQSVK
Trigger: TTTCACACTTTGGGAGGCCAAGCTGTTTTCTTCTGA...AGCAAAGATGAGGTTGCTGTTTGTAATTTGGCTTCCCTGGCCCTGAATATGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533495.5
CDS-3UTR CAA 90 bp TATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCAGAAGAAAACAGCTaGGCCTCCCAAAGTGTGAAA +
Preference number: 5 (lower is better)
Translates to: YLCSRSSLATEDMLVSSKSEENS*ASQSVK
Trigger: TTTCACACTTTGGGAGGCCAAGCTGTTTTCTTCTGA...CTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533495.5
ENST00000534285.5
CDS TCA 90 bp GATTTCCAGTACTTTCAATTCATGGAGCATACCTTGTTCCCACCTTaGTCCACATATCGAGCTGTGTTGTTATATACTCTCAGCATCGGT +
Preference number: 5 (lower is better)
Translates to: DFQYFQFMEHTLFPP*STYRAVLLYTLSIG
Trigger: ACCGATGCTGAGAGTATATAACAACACAGCTCGATATGTGGATCAAGGTGGGAACAAGGTATGCTCCATGAATTGAAAGTACTGGAAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533495.5
CDS-3UTR CAA 90 bp GCTAAAGGGGTGATGAAACCTTACTTAACCACTCCCTGTATGCAAGATGACTTAACCATGGGAGAGTGTTaGCCATTATGTGGATTTATG +
Preference number: 5 (lower is better)
Translates to: AKGVMKPYLTTPCMQDDLTMGEC*PLCGFM
Trigger: CATAAATCCACATAATGGCAAACACTCTCCCATGGT...TAAGTCATCTTGCATACAGGGAGTGGTTAAGTAAGGTTTCATCACCCCTTTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CAA 90 bp TTTAAATCAATTACTCCTTTTGCCTGCAACAGGGTCCAGCAAAGCCTTACCACCTTCAGGCGATCTTTATaGGCCAGAACAATATCCAAT +
Preference number: 5 (lower is better)
Translates to: FKSITPFACNRVQQSLTTFRRSL*ARTISN
Trigger: ATTGGATATTGTTCTGGCCAATAAAGATCGCCTGAA...GGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCAAAAGGAGTAATTGATTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CAA 90 bp CACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAAAGATCTCTGGCTTCAGGCGATCTTTATaGGCCAGAACAATATCCAAT +
Preference number: 5 (lower is better)
Translates to: HSFHEEIRNPKSKEKISGFRRSL*ARTISN
Trigger: ATTGGATATTGTTCTGGCCAATAAAGATCGCCTGAA...GCCAGAGATCTTTTCTTTGCTCTTTGGATTCCGGATCTCTTCATGAAACGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CAA 90 bp AAGCCTTACCACCTCAAGCAAACCCACTATACCTATCTATGCTCAAGAAGTAGTGCATCAATGTCTTCTTaGTGGATCCCAACAGATACT +
Preference number: 5 (lower is better)
Translates to: KPYHLKQTHYTYLCSRSSASMSS*WIPTDT
Trigger: AGTATCTGTTGGGATCCACAAAGAAGACATTGATGC...ACTACTTCTTGAGCATAGATAGGTATAGTGGGTTTGCTTGAGGTGGTAAGGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CAA 90 bp TATCCAATGTTGACTTGGCCACCATGGGAGAGTGTTTGCCATTATGTGGATTTAGCATCAATGTCTTCTTaGTGGATCCCAACAGATACT +
Preference number: 5 (lower is better)
Translates to: YPMLTWPPWESVCHYVDLASMSS*WIPTDT
Trigger: AGTATCTGTTGGGATCCACAAAGAAGACATTGATGC...TAAATCCACATAATGGCAAACACTCTCCCATGGTGGCCAAGTCAACATTGGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CAA 90 bp CACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAGAAAAGATCTCTGGCACATATCGAGCTGTGTaGTTATATACTCTCAGCATC +
Preference number: 5 (lower is better)
Translates to: HSFHEEIRNPKSKEKISGTYRAV*LYTLSI
Trigger: GATGCTGAGAGTATATAACAACACAGCTCGATATGT...GCCAGAGATCTTTTCTTTGCTCTTTGGATTCCGGATCTCTTCATGAAACGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528442.5
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp CTTCAGGTCATCAGGAATTTCTGGTATGCTCTGAATAGAGCCATTGCATGCAATTTTGCGGACACGACCTaGTTTCTCATAACTTGCATA +
Preference number: 5 (lower is better)
Translates to: LQVIRNFWYALNRAIACNFADTT*FLITCI
Trigger: TATGCAAGTTATGAGAAACAAGGTCGTGTCCGCAAA...ATTGCATGCAATGGCTCTATTCAGAGCATACCAGAAATTCCTGATGACCTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp TTTGCTTCTAGAGACCCACCAGTCAAAGCAGTAAAACTAAATCTCCTTAACAAACCCAGGTTCTGCTGGTaGCTCTTTCGATTACAGGAA +
Preference number: 5 (lower is better)
Translates to: FASRDPPVKAVKLNLLNKPRFCW*LFRLQE
Trigger: TTCCTGTAATCGAAAGAGCAACCAGCAGAACCTGGG...TTTGTTAAGGAGATTTAGTTTTACTGCTTTGACTGGTGGGTCTCTAGAAGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp AGTTTTGCTTCTAGAGACCCACCAGTCAAAGCAGTAAAACTAAATCTCCTTAACATTTCTGTGCACAGGTaGCTGCATTTGATGGTTCCC +
Preference number: 5 (lower is better)
Translates to: SFASRDPPVKAVKLNLLNISVHR*LHLMVP
Trigger: GGGAACCATCAAATGCAGCAACCTGTGCACAGAAAT...GTTAAGGAGATTTAGTTTTACTGCTTTGACTGGTGGGTCTCTAGAAGCAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp TTCCAAGTCTTTCCTCAGGATCCACACATCAGACATTCATCTCTATTCTCCAAAACAGCAACCTCATCTTaGCTGGTGTACTCCACTATT +
Preference number: 5 (lower is better)
Translates to: FQVFPQDPHIRHSSLFSKTATSS*LVYSTI
Trigger: AATAGTGGAGTACACCAGCAAAGATGAGGTTGCTGT...TTTGGAGAATAGAGATGAATGTCTGATGTGTGGATCCTGAGGAAAGACTTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp GACGCTTGTTCCCACCTTGATCCACATATCGAGCTGTGTTGTTATATACTCTCAGTGGATGTTCAAAGATaGGCTTTGATCAATGAAAGC +
Preference number: 5 (lower is better)
Translates to: DACSHLDPHIELCCYILSVDVQR*ALINES
Trigger: GCTTTCATTGATCAAAGCCAATCTTTGAACATCCAC...TGAGAGTATATAACAACACAGCTCGATATGTGGATCAAGGTGGGAACAAGCGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CAA 90 bp TTTAAATCAATTACTCCTTTTGCCTGCAACAGGGTCCAGCAAAGCCTTACCACCGTGGATGTTCAAAGATaGGCTTTGATCAATGAAAGC +
Preference number: 5 (lower is better)
Translates to: FKSITPFACNRVQQSLTTVDVQR*ALINES
Trigger: GCTTTCATTGATCAAAGCCAATCTTTGAACATCCAC...GGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCAAAAGGAGTAATTGATTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp TCTCATGAGTTATCACTCAGTTTTGCTTCTAGAGACCCACCAGTCAAAGCAGTAACTTTCTTTGTTTCTTaGTGCAAGTTAGAGACAGCG +
Preference number: 5 (lower is better)
Translates to: SHELSLSFASRDPPVKAVTFFVS*CKLETA
Trigger: CGCTGTCTCTAACTTGCACAAAGAAACAAAGAAAGT...TACTGCTTTGACTGGTGGGTCTCTAGAAGCAAAACTGAGTGATAACTCATGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300738.10
ENST00000532170.5
CDS-3UTR CAA 90 bp TATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGACTTTCTTTGTTTCTTaGTGCAAGTTAGAGACAGCG +
Preference number: 5 (lower is better)
Translates to: YLCSRSSLATEDMLVSSKTFFVS*CKLETA
Trigger: CGCTGTCTCTAACTTGCACAAAGAAACAAAGAAAGT...CTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300738.10
ENST00000532170.5
CDS-3UTR CAA 90 bp ATGAAACCTTACTTAACCACTCCCTGTATGCAAGATGACTTATTTTGCATTCCTATCGGTACAAGGCCATaGGAATTGCCATTAGTCCCA +
Preference number: 5 (lower is better)
Translates to: MKPYLTTPCMQDDLFCIPIGTRP*ELPLVP
Trigger: TGGGACTAATGGCAATTCCAATGGCCTTGTACCGAT...AGGAATGCAAAATAAGTCATCTTGCATACAGGGAGTGGTTAAGTAAGGTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp TATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTACATATCGAGCTGTGTaGTTATATACTCTCAGCATC +
Preference number: 5 (lower is better)
Translates to: YAQEVVWLLKTCWSLPSLTYRAV*LYTLSI
Trigger: GATGCTGAGAGTATATAACAACACAGCTCGATATGT...AAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR CAA 90 bp TTATCACTCAGTTTTGCTTCTAGAGACCCACCAGTCAAAGCAGTAAAACTAAATGACCAGGACACTCATTaGGACACATCAAAGACCAGT +
Preference number: 5 (lower is better)
Translates to: LSLSFASRDPPVKAVKLNDQDTH*DTSKTS
Trigger: ACTGGTCTTTGATGTGTCCAAATGAGTGTCCTGGTC...ATTTAGTTTTACTGCTTTGACTGGTGGGTCTCTAGAAGCAAAACTGAGTGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp TATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTGTGGATGTTCAAAGATaGGCTTTGATCAATGAAAGC +
Preference number: 5 (lower is better)
Translates to: YAQEVVWLLKTCWSLPSLVDVQR*ALINES
Trigger: GCTTTCATTGATCAAAGCCAATCTTTGAACATCCAC...AAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
ENST00000534285.5
CDS-3UTR CAA 90 bp TTAAATCAATTACTCCTTTTGCCTGCAACAGGGTCCAGCAAAGCCTTACCACCTTATTTGACTTCGTTTTaGGTTCACAGTGATTGGACT +
Preference number: 5 (lower is better)
Translates to: LNQLLLLPATGSSKALPPYLTSF*VHSDWT
Trigger: AGTCCAATCACTGTGAACCAAAAACGAAGTCAAATA...AGGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCAAAAGGAGTAATTGATTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533495.5
CDS-3UTR CAA 90 bp TGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTGGTCTCTTCCAAGTCTTTCTATTTGACTTCGTTTTaGGTTCACAGTGATTGGACT +
Preference number: 5 (lower is better)
Translates to: CSRSSLATEDMLVSSKSFYLTSF*VHSDWT
Trigger: AGTCCAATCACTGTGAACCAAAAACGAAGTCAAATA...GAAAGACTTGGAAGAGACCAGCATGTCTTCAGTAGCCAAACTACTTCTTGAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533495.5
ENST00000534285.5
CDS CCA 90 bp CATCTTTATTGGCCAGAACAATATCCAATGTTGACTTGGCCACCATaGGAGAGTGTTTGCCATTATGTGGATTTATGTAGTTATAGAGGT +
Preference number: 5 (lower is better)
Translates to: HLYWPEQYPMLTWPP*ESVCHYVDLCSYRG
Trigger: ACCTCTATAACTACATAAATCCACATAATGGCAAACACTCTCCCATGGTGGCCAAGTCAACATTGGATATTGTTCTGGCCAATAAAGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526350.5
CDS-3UTR CAA 90 bp AAACCCACTATACCTATCTATGCTCAAGAAGTAGTTTGGCTACTGAAGACATGCTTCAGGCGATCTTTATaGGCCAGAACAATATCCAAT +
Preference number: 5 (lower is better)
Translates to: KPTIPIYAQEVVWLLKTCFRRSL*ARTISN
Trigger: ATTGGATATTGTTCTGGCCAATAAAGATCGCCTGAA...GCATGTCTTCAGTAGCCAAACTACTTCTTGAGCATAGATAGGTATAGTGGGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
CDS-3UTR CAA 90 bp TTATCACTCAGTTTTGCTTCTAGAGACCCACCAGTCAAAGCAGTAAAACTAAATACAGCAACCTCATCTTaGCTGGTGTACTCCACTATT +
Preference number: 5 (lower is better)
Translates to: LSLSFASRDPPVKAVKLNTATSS*LVYSTI
Trigger: AATAGTGGAGTACACCAGCAAAGATGAGGTTGCTGT...ATTTAGTTTTACTGCTTTGACTGGTGGGTCTCTAGAAGCAAAACTGAGTGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS-3UTR CAA 90 bp TCTAGAGACCCACCAGTCAAAGCAGTAAAACTAAATCTCCTTAACAAAACTGAATTTGCAATCTTCTCCTaGAGAACCTTCCAGTCCCAT +
Preference number: 5 (lower is better)
Translates to: SRDPPVKAVKLNLLNKTEFAIFS*RTFQSH
Trigger: ATGGGACTGGAAGGTTCTCAAGGAGAAGATTGCAAA...TTCAGTTTTGTTAAGGAGATTTAGTTTTACTGCTTTGACTGGTGGGTCTCTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS TCA 90 bp AAGTGTTATACATACATCTTTATTGGCCAGAACAATATCCAATGTTaGCTTGGCCACCATGGGAGAGTGTTTGCCATTATGTGGATTTAT +
Preference number: 5 (lower is better)
Translates to: KCYTYIFIGQNNIQC*LGHHGRVFAIMWIY
Trigger: ATAAATCCACATAATGGCAAACACTCTCCCATGGTGGCCAAGTCAACATTGGATATTGTTCTGGCCAATAAAGATGTATGTATAACACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526350.5
CDS CCA 90 bp TTATACATACATCTTTATTGGCCAGAACAATATCCAATGTTGACTTaGCCACCATGGGAGAGTGTTTGCCATTATGTGGATTTATGTAGT +
Preference number: 5 (lower is better)
Translates to: LYIHLYWPEQYPMLT*PPWESVCHYVDLCS
Trigger: ACTACATAAATCCACATAATGGCAAACACTCTCCCATGGTGGCCAAGTCAACATTGGATATTGTTCTGGCCAATAAAGATGTATGTATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526350.5
CDS-3UTR CAA 90 bp CAGATAAAGGTCCTATCAGTACTTCTCATGAGTTATCACTCAGTTTTGCTTCTAGTGGATGTTCAAAGATaGGCTTTGATCAATGAAAGC +
Preference number: 5 (lower is better)
Translates to: QIKVLSVLLMSYHSVLLLVDVQR*ALINES
Trigger: GCTTTCATTGATCAAAGCCAATCTTTGAACATCCAC...TAGAAGCAAAACTGAGTGATAACTCATGAGAAGTACTGATAGGACCTTTATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000532170.5
ENST00000533349.5
ENST00000533495.5
CDS TCA 72 bp GAGCCTCGCTTGATCACATGCATCGCAGCTAGTGGCTaGGGCTCTGAAGGATCCAAGACTGGACTGCGGCTC +
Preference number: 6 (lower is better)
Translates to: EPRLITCIAASG*GSEGSKTGLRL
Trigger: GAGCCGCAGTCCAGTCTTGGATCCTTCAGAGCCTCAGCCACTAGCTGCGATGCATGTGATCAAGCGAGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532710.5
CDS TCA 72 bp CCATCTCGCTTGATCACATGCATCGCAGCTAGTGGCTaGGGCTCTGAAGGATCCAAGACTGGACTGCGGCTC +
Preference number: 6 (lower is better)
Translates to: PSRLITCIAASG*GSEGSKTGLRL
Trigger: GAGCCGCAGTCCAGTCTTGGATCCTTCAGAGCCTCAGCCACTAGCTGCGATGCATGTGATCAAGCGAGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300738.10
ENST00000526350.5
ENST00000532170.5
ENST00000533349.5
CDS TCA 72 bp TCTACTCGCTTGATCACATGCATCGCAGCTAGTGGCTaGGGCTCTGAAGGATCCAAGACTGGACTGCGGCTC +
Preference number: 6 (lower is better)
Translates to: STRLITCIAASG*GSEGSKTGLRL
Trigger: GAGCCGCAGTCCAGTCTTGGATCCTTCAGAGCCTCAGCCACTAGCTGCGATGCATGTGATCAAGCGAGTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526865.5
CDS TCA 72 bp AAGACTCCAAGATGGCGATCGCCACCTCGGACACCCTaGCTCAGCATTTCCGGGTTCACCTTTCCTGTTCCT +
Preference number: 6 (lower is better)
Translates to: KTPRWRSPPRTP*LSISGFTFPVP
Trigger: AGGAACAGGAAAGGTGAACCCGGAAATGCTGAGTCAGGGTGTCCGAGGTGGCGATCGCCATCTTGGAGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534285.5
CDS TCA 72 bp TCTAGCCAATATGGTGAAACCCCATCTCTACTCGCTTaGTCACATGCATCGCAGCTAGTGGCTGAGGCTCTG +
Preference number: 6 (lower is better)
Translates to: SSQYGETPSLLA*SHASQLVAEAL
Trigger: CAGAGCCTCAGCCACTAGCTGCGATGCATGTGATCAAGCGAGTAGAGATGGGGTTTCACCATATTGGCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526865.5
CDS CAA 90 bp CAGCTTGGCCTCCCAAAGTGTGAAACTTGTTATTTGACTTCGTTTTaGGTTCACAGTGATTGGACTCCGGTGAAGACTCCAAGATGGCGA +
Preference number: 6 (lower is better)
Translates to: QLGLPKCETCYLTSF*VHSDWTPVKTPRWR
Trigger: TCGCCATCTTGGAGTCTTCACCGGAGTCCAATCACTGTGAACCAAAAACGAAGTCAAATAACAAGTTTCACACTTTGGGAGGCCAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533495.5
ENST00000534285.5
CDS TCA 72 bp CTGTTTCAGCAGCCAAAGTATCTAGTTCCACTGTGGTaGCCCCACTGTACAAGCCTTGGATTACTTTCATGG +
Preference number: 6 (lower is better)
Translates to: LFQQPKYLVPLW*PHCTSLGLLSW
Trigger: CCATGAAAGTAATCCAAGGCTTGTACAGTGGGGTCACCACAGTGGAACTAGATACTTTGGCTGCTGAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300738.10
ENST00000526350.5
ENST00000526865.5
ENST00000530368.1
ENST00000532170.5
ENST00000532710.5
CDS CCA 72 bp ACTTGTTATTTGACTTCGTTTTTGGTTCACAGTGATTaGACTCCGGTGAAGACTCCAAGATGGCGATCGCCA +
Preference number: 6 (lower is better)
Translates to: TCYLTSFLVHSD*TPVKTPRWRSP
Trigger: TGGCGATCGCCATCTTGGAGTCTTCACCGGAGTCCAATCACTGTGAACCAAAAACGAAGTCAAATAACAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533495.5
ENST00000534285.5
CDS CAA 90 bp GCTGTGTTGTTATATACTCTCAGCATCGGTACAAGGCCATTGGAATaGCCATTAGTCTGCTCTCCATCTCTACTTCTCCAAAACACAACA +
Preference number: 6 (lower is better)
Translates to: AVLLYTLSIGTRPLE*PLVCSPSLLLQNTT
Trigger: TGTTGTGTTTTGGAGAAGTAGAGATGGAGAGCAGACTAATGGCAATTCCAATGGCCTTGTACCGATGCTGAGAGTATATAACAACACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528470.5
CDS CAA 90 bp TATCGAGCTGTGTTGTTATATACTCTCAGCATCGGTACAAGGCCATaGGAATTGCCATTAGTCTGCTCTCCATCTCTACTTCTCCAAAAC +
Preference number: 6 (lower is better)
Translates to: YRAVLLYTLSIGTRP*ELPLVCSPSLLLQN
Trigger: GTTTTGGAGAAGTAGAGATGGAGAGCAGACTAATGGCAATTCCAATGGCCTTGTACCGATGCTGAGAGTATATAACAACACAGCTCGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528470.5
CDS CAA 90 bp CTCAGAAGAAAACAGCTTGGCCTCCCAAAGTGTGAAACTTGTTATTaGACTTCGTTTTTGGTTCACAGTGATTGGACTCCGGTGAAGACT +
Preference number: 6 (lower is better)
Translates to: LRRKQLGLPKCETCY*TSFLVHSDWTPVKT
Trigger: AGTCTTCACCGGAGTCCAATCACTGTGAACCAAAAACGAAGTCAAATAACAAGTTTCACACTTTGGGAGGCCAAGCTGTTTTCTTCTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533495.5
ENST00000534285.5
CDS CAA 72 bp TTATATACTCTCAGCATCGGTACAAGGCCATTGGAATaGCCATTAGTCTGCTCTCCATCTCTACTTCTCCAA +
Preference number: 6 (lower is better)
Translates to: LYTLSIGTRPLE*PLVCSPSLLLQ
Trigger: TTGGAGAAGTAGAGATGGAGAGCAGACTAATGGCAATTCCAATGGCCTTGTACCGATGCTGAGAGTATATAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528470.5
CDS CAA 72 bp GTGTTGTTATATACTCTCAGCATCGGTACAAGGCCATaGGAATTGCCATTAGTCTGCTCTCCATCTCTACTT +
Preference number: 6 (lower is better)
Translates to: VLLYTLSIGTRP*ELPLVCSPSLL
Trigger: AAGTAGAGATGGAGAGCAGACTAATGGCAATTCCAATGGCCTTGTACCGATGCTGAGAGTATATAACAACAC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526304.5
ENST00000528470.5
CDS CAA 72 bp CTCCCAAAGTGTGAAACTTGTTATTTGACTTCGTTTTaGGTTCACAGTGATTGGACTCCGGTGAAGACTCCA +
Preference number: 6 (lower is better)
Translates to: LPKCETCYLTSF*VHSDWTPVKTP
Trigger: TGGAGTCTTCACCGGAGTCCAATCACTGTGAACCAAAAACGAAGTCAAATAACAAGTTTCACACTTTGGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533495.5
ENST00000534285.5
CDS CAA 72 bp AAACAGCTTGGCCTCCCAAAGTGTGAAACTTGTTATTaGACTTCGTTTTTGGTTCACAGTGATTGGACTCCG +
Preference number: 6 (lower is better)
Translates to: KQLGLPKCETCY*TSFLVHSDWTP
Trigger: CGGAGTCCAATCACTGTGAACCAAAAACGAAGTCAAATAACAAGTTTCACACTTTGGGAGGCCAAGCTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533495.5
ENST00000534285.5
CDS CAA 90 bp GCTGTGTTGTTATATACTCTCAGCATCGGTACAAGGCCATTGGAATaGCCATTAGTCTGCTCTCCATCTCTACTTCTTACAGAAAAGGAA +
Preference number: 6 (lower is better)
Translates to: AVLLYTLSIGTRPLE*PLVCSPSLLLTEKE
Trigger: TTCCTTTTCTGTAAGAAGTAGAGATGGAGAGCAGACTAATGGCAATTCCAATGGCCTTGTACCGATGCTGAGAGTATATAACAACACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526304.5
CDS CAA 90 bp TATCGAGCTGTGTTGTTATATACTCTCAGCATCGGTACAAGGCCATaGGAATTGCCATTAGTCTGCTCTCCATCTCTACTTCTTACAGAA +
Preference number: 6 (lower is better)
Translates to: YRAVLLYTLSIGTRP*ELPLVCSPSLLLTE
Trigger: TTCTGTAAGAAGTAGAGATGGAGAGCAGACTAATGGCAATTCCAATGGCCTTGTACCGATGCTGAGAGTATATAACAACACAGCTCGATA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526304.5
CDS CAA 72 bp TTATATACTCTCAGCATCGGTACAAGGCCATTGGAATaGCCATTAGTCTGCTCTCCATCTCTACTTCTTACA +
Preference number: 6 (lower is better)
Translates to: LYTLSIGTRPLE*PLVCSPSLLLT
Trigger: TGTAAGAAGTAGAGATGGAGAGCAGACTAATGGCAATTCCAATGGCCTTGTACCGATGCTGAGAGTATATAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526304.5
CDS TCA 72 bp TACTTTCAATTCATGGAGCATACCTTGTTCCCACCTTaGTCCACATATCGAGCTGTGTTGTTATATACTCTC +
Preference number: 6 (lower is better)
Translates to: YFQFMEHTLFPP*STYRAVLLYTL
Trigger: GAGAGTATATAACAACACAGCTCGATATGTGGATCAAGGTGGGAACAAGGTATGCTCCATGAATTGAAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533495.5
CDS CAA 72 bp GTACTTTCAATTCATGGAGCATACCTTGTTCCCACCTaGATCCACATATCGAGCTGTGTTGTTATATACTCT +
Preference number: 6 (lower is better)
Translates to: VLSIHGAYLVPT*IHISSCVVIYS
Trigger: AGAGTATATAACAACACAGCTCGATATGTGGATCAAGGTGGGAACAAGGTATGCTCCATGAATTGAAAGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533495.5
CDS CCA 72 bp ATTCGAGATGTAATTTTGTCAAACATGACTCGTTCTTaGCGGCCATCTAAAGAATCAAATCATGTTAGCAAT +
Preference number: 6 (lower is better)
Translates to: IRDVILSNMTRS*RPSKESNHVSN
Trigger: ATTGCTAACATGATTTGATTCTTTAGATGGCCGCCAAGAACGAGTCATGTTTGACAAAATTACATCTCGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530368.1