Pregenerated sensors for RRAGC (Homo sapiens)
Ensembl gene IDs: ENSG00000116954Ensembl transcript IDs: ENST00000373001.4, ENST00000474456.1, ENST00000493015.1, ENST00000496778.1
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCAGCACCACGTGCTCACTCCAACTCCCAGTGGACAGTCCCCCAATaGCTTAGGGTCACTCGTGGTCAACCAAATGCAATCAAGAAGCTC | + |
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Preference number: 1 (lower is better) Translates to: AAPRAHSNSQWTVPQ*LRVTRGQPNAIKKL Trigger: GAGCTTCTTGATTGCATTTGGTTGACCACGAGTGACCCTAAGGCATTGGGGGACTGTCCACTGGGAGTTGGAGTGAGCACGTGGTGCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| 3UTR CCA 90 bp | ACTCAAGTGGTCCAGTGGCTTTGGAATATATGTCTACTGGGCATGTaGAATAGAAATAATGTGTTAGGTTTAAATCAATGGAAAGGGTAT | + |
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Preference number: 1 (lower is better) Translates to: TQVVQWLWNICLLGM*NRNNVLGLNQWKGY Trigger: ATACCCTTTCCATTGATTTAAACCTAACACATTATTTCTATTCCACATGCCCAGTAGACATATATTCCAAAGCCACTGGACCACTTGAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| 3UTR-3UTR TCA 90 bp | CTATGTGTCTTCCGAGTTAGCAAGCAAATGCATTTAAAAGGTCTTAGTTGTGCACATCCGACCCTGGAGTaGAGAGTAAGCTGGCACAGA | + |
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Preference number: 2 (lower is better) Translates to: LCVFRVSKQMHLKGLSCAHPTLE*RVSWHR Trigger: TCTGTGCCAGCTTACTCTTCACTCCAGGGTCGGATG...TGCACAACTAAGACCTTTTAAATGCATTTGCTTGCTAACTCGGAAGACACATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| 3UTR-3UTR CCA 90 bp | CTCAAGTGGTCCAGTGGCTTTGGAATATATGTCTACTGGGCATGTGGAATAGAAAAGAACCCAGACATCTaGTACTCAGAACATAGGTGC | + |
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Preference number: 2 (lower is better) Translates to: LKWSSGFGIYVYWACGIEKNPDI*YSEHRC Trigger: GCACCTATGTTCTGAGTACCAGATGTCTGGGTTCTT...TTCTATTCCACATGCCCAGTAGACATATATTCCAAAGCCACTGGACCACTTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| 3UTR-3UTR TCA 90 bp | AGTACCACAGTTGACACTTGGTGTCAGAATACTAGAGACAAAGTATGTAAAACAGGAGAAACACACACTTaGGTTCTGTGGTCTCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: STTVDTWCQNTRDKVCKTGETHT*VLWSPE Trigger: TTCTGGAGACCACAGAACTCAAGTGTGTGTTTCTCC...TGTTTTACATACTTTGTCTCTAGTATTCTGACACCAAGTGTCAACTGTGGTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| 3UTR-3UTR GCA 90 bp | CATATCCTAGGCAAAGAAAGTACCACAGTTGACACTTGGTGTCAGAATACTAGAATAGGAATGTCTTGCTaGAGACTATGTGTCTTCCGA | + |
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Preference number: 2 (lower is better) Translates to: HILGKESTTVDTWCQNTRIGMSC*RLCVFR Trigger: TCGGAAGACACATAGTCTGCAGCAAGACATTCCTAT...TCTAGTATTCTGACACCAAGTGTCAACTGTGGTACTTTCTTTGCCTAGGATATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| 3UTR-3UTR TCA 90 bp | GAACTTAAGCAAGGCAGAATTTTTAGAGTCTACTCAAATGAAAGCCTAAGTGAAGGGTTTTCATCCAAATaGGAAACTCTACCCCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: ELKQGRIFRVYSNESLSEGFSSK*ETLPLV Trigger: GACAAGGGGTAGAGTTTCTCATTTGGATGAAAACCC...TTCACTTAGGCTTTCATTTGAGTAGACTCTAAAAATTCTGCCTTGCTTAAGTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| 3UTR-3UTR TCA 90 bp | AGTACCACAGTTGACACTTGGTGTCAGAATACTAGAGACAAAGTATGTAAAACATTGTACACCACCAGTTaGAGGGGTTTTCATCCAAAT | + |
|
Preference number: 2 (lower is better) Translates to: STTVDTWCQNTRDKVCKTLYTTS*RGFHPN Trigger: ATTTGGATGAAAACCCCTTCAACTGGTGGTGTACAA...TGTTTTACATACTTTGTCTCTAGTATTCTGACACCAAGTGTCAACTGTGGTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| 3UTR-3UTR GCA 90 bp | CATATCCTAGGCAAAGAAAGTACCACAGTTGACACTTGGTGTCAGAATACTAGAAATATAGGAATGTCTTaGTGCAGACTATGTGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: HILGKESTTVDTWCQNTRNIGMS*CRLCVF Trigger: GAAGACACATAGTCTGCAGCAAGACATTCCTATATT...TCTAGTATTCTGACACCAAGTGTCAACTGTGGTACTTTCTTTGCCTAGGATATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| 3UTR TCA 72 bp | CCCATGTCCTGTAGCACGTGGCATCCGACCCTGGAGTaGAGAGTAAGCTGGCACAGAGCCCCGACGCTGGGA | + |
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Preference number: 3 (lower is better) Translates to: PMSCSTWHPTLE*RVSWHRAPTLG Trigger: TCCCAGCGTCGGGGCTCTGTGCCAGCTTACTCTTCACTCCAGGGTCGGATGCCACGTGCTACAGGACATGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| 3UTR GCA 72 bp | CGTGCTCACTCCAACTCCCAGTGGACAGTCCCCCAATaGCTTAGGGTCACTCGTGGTCAACCAAATGCAATC | + |
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Preference number: 3 (lower is better) Translates to: RAHSNSQWTVPQ*LRVTRGQPNAI Trigger: GATTGCATTTGGTTGACCACGAGTGACCCTAAGGCATTGGGGGACTGTCCACTGGGAGTTGGAGTGAGCACG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| 3UTR-3UTR CAA 90 bp | CAGTCCCCCAATGCCTTAGGGTCACTCGTGGTCAACCAAATGCAATCAAGAAGCGAGAAACTCTACCCCTaGTCTCTAGTGGAACAGGCA | + |
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Preference number: 3 (lower is better) Translates to: QSPNALGSLVVNQMQSRSEKLYP*SLVEQA Trigger: TGCCTGTTCCACTAGAGACAAGGGGTAGAGTTTCTC...GCTTCTTGATTGCATTTGGTTGACCACGAGTGACCCTAAGGCATTGGGGGACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| 3UTR-3UTR CAA 90 bp | GGAATGTCTTGCTGCAGACTATGTGTCTTCCGAGTTAGCAAGCAAATGCATTTAGTTGTACACCACCAGTaGAAGGGGTTTTCATCCAAA | + |
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Preference number: 3 (lower is better) Translates to: GMSCCRLCVFRVSKQMHLVVHHQ*KGFSSK Trigger: TTTGGATGAAAACCCCTTCAACTGGTGGTGTACAAC...TAAATGCATTTGCTTGCTAACTCGGAAGACACATAGTCTGCAGCAAGACATTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| 3UTR CCA 72 bp | CAGTGGCACTTATGTACTCAAGTGGTCCAGTGGCTTTaGAATATATGTCTACTGGGCATGTGGAATAGAAAT | + |
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Preference number: 3 (lower is better) Translates to: QWHLCTQVVQWL*NICLLGMWNRN Trigger: ATTTCTATTCCACATGCCCAGTAGACATATATTCCAAAGCCACTGGACCACTTGAGTACATAAGTGCCACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| 3UTR-3UTR CAA 90 bp | CATATCCTAGGCAAAGAAAGTACCACAGTTGACACTTGGTGTCAGAATACTAGACAATATAGGAATGTCTaGCTGCAGACTATGTGTCTT | + |
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Preference number: 3 (lower is better) Translates to: HILGKESTTVDTWCQNTRQYRNV*LQTMCL Trigger: AAGACACATAGTCTGCAGCAAGACATTCCTATATTG...TCTAGTATTCTGACACCAAGTGTCAACTGTGGTACTTTCTTTGCCTAGGATATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| 3UTR TCA 72 bp | AAAGGTCTTAGTTGTGCAATGTCCAAAACTGAAATCTaGGAGGCAGTGTTAGAACTTAAGCAAGGCAGAATT | + |
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Preference number: 3 (lower is better) Translates to: KGLSCAMSKTEI*EAVLELKQGRI Trigger: AATTCTGCCTTGCTTAAGTTCTAACACTGCCTCTCAGATTTCAGTTTTGGACATTGCACAACTAAGACCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| 3UTR-3UTR CAA 90 bp | AGTACCACAGTTGACACTTGGTGTCAGAATACTAGAGACAAAGTATGTAAAACATATTTTCAACTGGAATaGATGGCAACATTCCCTGGT | + |
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Preference number: 3 (lower is better) Translates to: STTVDTWCQNTRDKVCKTYFQLE*MATFPG Trigger: ACCAGGGAATGTTGCCATCAATTCCAGTTGAAAATA...TGTTTTACATACTTTGTCTCTAGTATTCTGACACCAAGTGTCAACTGTGGTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| 3UTR CCA 72 bp | CATATCCTAGGCAAAGAAAGTACCACAGTTGACACTTaGTGTCAGAATACTAGAGACAAAGTATGTAAAACA | + |
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Preference number: 3 (lower is better) Translates to: HILGKESTTVDT*CQNTRDKVCKT Trigger: TGTTTTACATACTTTGTCTCTAGTATTCTGACACCAAGTGTCAACTGTGGTACTTTCTTTGCCTAGGATATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| CDS-3UTR CCA 90 bp | GTTGCAGCACCACGTGCTCACTCCAACTCCCAGTGGACAGTCCCCCAATGCCTTGTAGCCGAAGTCCTTTaGAAACGAATCGGCCGCGCC | + |
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Preference number: 4 (lower is better) Translates to: VAAPRAHSNSQWTVPQCLVAEVL*KRIGRA Trigger: GGCGCGGCCGATTCGTTTCCAAAGGACTTCGGCTAC...AAGGCATTGGGGGACTGTCCACTGGGAGTTGGAGTGAGCACGTGGTGCTGCAAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| CDS-3UTR TCA 90 bp | ACTCCAACTCCCAGTGGACAGTCCCCCAATGCCTTAGGGTCACTCGTGGTCAACCATCCGACCCTGGAGTaGAGAGTAAGCTGGCACAGA | + |
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Preference number: 4 (lower is better) Translates to: TPTPSGQSPNALGSLVVNHPTLE*RVSWHR Trigger: TCTGTGCCAGCTTACTCTTCACTCCAGGGTCGGATG...GTTGACCACGAGTGACCCTAAGGCATTGGGGGACTGTCCACTGGGAGTTGGAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| CDS-3UTR GCA 90 bp | CTCAAGTGGTCCAGTGGCTTTGGAATATATGTCTACTGGGCATGTGGAATAGAACGGCCGCGCCGTAACTaGCGGCGAGGGGCGTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: LKWSSGFGIYVYWACGIERPRRN*RRGASP Trigger: AGGAGACGCCCCTCGCCGGCAGTTACGGCGCGGCCG...TTCTATTCCACATGCCCAGTAGACATATATTCCAAAGCCACTGGACCACTTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| CDS-3UTR TCA 90 bp | GTTGCAGCACCACGTGCTCACTCCAACTCCCAGTGGACAGTCCCCCAATGCCTTTCGGCAGTTGTGGAATaGGTTTCTGCACCACCTTAC | + |
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Preference number: 4 (lower is better) Translates to: VAAPRAHSNSQWTVPQCLSAVVE*VSAPPY Trigger: GTAAGGTGGTGCAGAAACTCATTCCACAACTGCCGA...AAGGCATTGGGGGACTGTCCACTGGGAGTTGGAGTGAGCACGTGGTGCTGCAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| CDS-3UTR CCA 90 bp | ACTCCAACTCCCAGTGGACAGTCCCCCAATGCCTTAGGGTCACTCGTGGTCAACGGGATTCAGACTAGATaGCGTTTCGTGGCGTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: TPTPSGQSPNALGSLVVNGIQTR*RFVACH Trigger: ATGGCACGCCACGAAACGCCATCTAGTCTGAATCCC...GTTGACCACGAGTGACCCTAAGGCATTGGGGGACTGTCCACTGGGAGTTGGAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| CDS-3UTR CCA 90 bp | ACTCCAACTCCCAGTGGACAGTCCCCCAATGCCTTAGGGTCACTCGTGGTCAACCAAGGTCGGCAGTTGTaGAATGAGTTTCTGCACCAC | + |
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Preference number: 4 (lower is better) Translates to: TPTPSGQSPNALGSLVVNQGRQL*NEFLHH Trigger: GTGGTGCAGAAACTCATTCCACAACTGCCGACCTTG...GTTGACCACGAGTGACCCTAAGGCATTGGGGGACTGTCCACTGGGAGTTGGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| CDS-3UTR GCA 90 bp | GGATGGGTAACTGGTGTTATCTCCAGGTCCAAAATATCCCAACTACTTAAAGGGTCCTCCGCCCCGTACTaGAGGGACATGGTGCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: GWVTGVISRSKISQLLKGSSAPY*RDMVLE Trigger: CTCCAGCACCATGTCCCTGCAGTACGGGGCGGAGGA...CCCTTTAAGTAGTTGGGATATTTTGGACCTGGAGATAACACCAGTTACCCATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| CDS-3UTR CCA 90 bp | ACTCCAACTCCCAGTGGACAGTCCCCCAATGCCTTAGGGTCACTCGTGGTCAACAAGAACCCAGACATCTaGTACTCAGAACATAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: TPTPSGQSPNALGSLVVNKNPDI*YSEHRC Trigger: GCACCTATGTTCTGAGTACCAGATGTCTGGGTTCTT...GTTGACCACGAGTGACCCTAAGGCATTGGGGGACTGTCCACTGGGAGTTGGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| CDS-3UTR GCA 90 bp | CATATCCTAGGCAAAGAAAGTACCACAGTTGACACTTGGTGTCAGAATACTAGATCTGGATGGAGGACTTaGCGCTGCGCCGGAGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: HILGKESTTVDTWCQNTRSGWRT*RCAGVP Trigger: TGGGACTCCGGCGCAGCGGCAAGTCCTCCATCCAGA...TCTAGTATTCTGACACCAAGTGTCAACTGTGGTACTTTCTTTGCCTAGGATATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| CDS-3UTR TCA 90 bp | CTATGTGTCTTCCGAGTTAGCAAGCAAATGCATTTAAAAGGTCTTAGTTGTGCATGCGCCGGAGTCCCATaGGCAGAATCCTCGGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: LCVFRVSKQMHLKGLSCACAGVP*AESSAW Trigger: CCAAGCCGAGGATTCTGCTCATGGGACTCCGGCGCA...TGCACAACTAAGACCTTTTAAATGCATTTGCTTGCTAACTCGGAAGACACATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| CDS-3UTR GCA 90 bp | CTCAAGTGGTCCAGTGGCTTTGGAATATATGTCTACTGGGCATGTGGAATAGAATGGCGTTTCGTGGCGTaGCATTGTGTGTCAGCGCTT | + |
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Preference number: 4 (lower is better) Translates to: LKWSSGFGIYVYWACGIEWRFVA*HCVSAL Trigger: AAGCGCTGACACACAATGGCACGCCACGAAACGCCA...TTCTATTCCACATGCCCAGTAGACATATATTCCAAAGCCACTGGACCACTTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| CDS-3UTR GCA 90 bp | GGATGGGTAACTGGTGTTATCTCCAGGTCCAAAATATCCCAACTACTTAAAGGGACCACCGTTGAGCCTTaGTCTCCACCTGATGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: GWVTGVISRSKISQLLKGTTVEP*SPPDAA Trigger: TGCTGCATCAGGTGGAGAGCAAGGCTCAACGGTGGT...CCCTTTAAGTAGTTGGGATATTTTGGACCTGGAGATAACACCAGTTACCCATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| CDS-3UTR GCA 90 bp | GGATGGGTAACTGGTGTTATCTCCAGGTCCAAAATATCCCAACTACTTAAAGGGTGGACAGTCCCCCAATaGCTTAGGGTCACTCGTGGT | + |
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Preference number: 4 (lower is better) Translates to: GWVTGVISRSKISQLLKGWTVPQ*LRVTRG Trigger: ACCACGAGTGACCCTAAGGCATTGGGGGACTGTCCA...CCCTTTAAGTAGTTGGGATATTTTGGACCTGGAGATAACACCAGTTACCCATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| CDS-3UTR CCA 90 bp | GTTAGCAAGCAAATGCATTTAAAAGGTCTTAGTTGTGCAATGTCCAAAACTGAACGTACTGCAGGGACATaGTGCTGGAGCCGCCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: VSKQMHLKGLSCAMSKTERTAGT*CWSRRR Trigger: GCGGCGGCGGCTCCAGCACCATGTCCCTGCAGTACG...TTCAGTTTTGGACATTGCACAACTAAGACCTTTTAAATGCATTTGCTTGCTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| CDS-3UTR GCA 90 bp | CATATCCTAGGCAAAGAAAGTACCACAGTTGACACTTGGTGTCAGAATACTAGATGTTGCAGCACCACGTaGTCACTCCAACTCCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: HILGKESTTVDTWCQNTRCCSTT*SLQLPV Trigger: CACTGGGAGTTGGAGTGAGCACGTGGTGCTGCAACA...TCTAGTATTCTGACACCAAGTGTCAACTGTGGTACTTTCTTTGCCTAGGATATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| CDS-3UTR TCA 90 bp | GGAATGTCTTGCTGCAGACTATGTGTCTTCCGAGTTAGCAAGCAAATGCATTTAGAGGGTCTCGTTGGGTaGCATCTTATGAAACACCAC | + |
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Preference number: 4 (lower is better) Translates to: GMSCCRLCVFRVSKQMHLEGLVG*HLMKHH Trigger: GTGGTGTTTCATAAGATGTCACCCAACGAGACCCTC...TAAATGCATTTGCTTGCTAACTCGGAAGACACATAGTCTGCAGCAAGACATTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| CDS-3UTR CCA 90 bp | GGATGGGTAACTGGTGTTATCTCCAGGTCCAAAATATCCCAACTACTTAAAGGGGTGGTCCAGTGGCTTTaGAATATATGTCTACTGGGC | + |
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Preference number: 4 (lower is better) Translates to: GWVTGVISRSKISQLLKGVVQWL*NICLLG Trigger: GCCCAGTAGACATATATTCCAAAGCCACTGGACCAC...CCCTTTAAGTAGTTGGGATATTTTGGACCTGGAGATAACACCAGTTACCCATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| CDS-3UTR TCA 90 bp | CTCAAGTGGTCCAGTGGCTTTGGAATATATGTCTACTGGGCATGTGGAATAGAATTGGGTGACATCTTATaGAACACCACCTTCTGGATG | + |
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Preference number: 4 (lower is better) Translates to: LKWSSGFGIYVYWACGIELGDIL*NTTFWM Trigger: CATCCAGAAGGTGGTGTTTCATAAGATGTCACCCAA...TTCTATTCCACATGCCCAGTAGACATATATTCCAAAGCCACTGGACCACTTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| CDS-3UTR TCA 90 bp | AGTAGCTTCAGTTGTACACCACCAGTTGAAGGGGTTTTCATCCAAATGAGAAACCATCCTGTGCGTCAATaGCGTATATCAATGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: SSFSCTPPVEGVFIQMRNHPVRQ*RISMLL Trigger: CAGGAGCATTGATATACGTCATTGACGCACAGGATG...GTTTCTCATTTGGATGAAAACCCCTTCAACTGGTGGTGTACAACTGAAGCTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| CDS-3UTR CCA 90 bp | CTATGTGTCTTCCGAGTTAGCAAGCAAATGCATTTAAAAGGTCTTAGTTGTGCACTAGATGGCGTTTCGTaGCGTGCCATTGTGTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: LCVFRVSKQMHLKGLSCALDGVS*RAIVCQ Trigger: CTGACACACAATGGCACGCCACGAAACGCCATCTAG...TGCACAACTAAGACCTTTTAAATGCATTTGCTTGCTAACTCGGAAGACACATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| 3UTR CAA 72 bp | TTTTCAATACTTCCGAGGGAACTAATGCAACCACCGTaGAGCCTTGCTCTCCACCTGATGCAGCATAAAATT | + |
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Preference number: 4 (lower is better) Translates to: FSILPRELMQPP*SLALHLMQHKI Trigger: AATTTTATGCTGCATCAGGTGGAGAGCAAGGCTCAACGGTGGTTGCATTAGTTCCCTCGGAAGTATTGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| CDS-3UTR TCA 90 bp | AGTAGCTTCAGTTGTACACCACCAGTTGAAGGGGTTTTCATCCAAATGAGAAACGGGTTTTCATCCAAATaGGAAACTCTACCCCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: SSFSCTPPVEGVFIQMRNGFSSK*ETLPLV Trigger: GACAAGGGGTAGAGTTTCTCATTTGGATGAAAACCC...GTTTCTCATTTGGATGAAAACCCCTTCAACTGGTGGTGTACAACTGAAGCTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| CDS-3UTR TCA 90 bp | GGATGGGTAACTGGTGTTATCTCCAGGTCCAAAATATCCCAACTACTTAAAGGGTTGTACACCACCAGTTaGAGGGGTTTTCATCCAAAT | + |
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Preference number: 4 (lower is better) Translates to: GWVTGVISRSKISQLLKGLYTTS*RGFHPN Trigger: ATTTGGATGAAAACCCCTTCAACTGGTGGTGTACAA...CCCTTTAAGTAGTTGGGATATTTTGGACCTGGAGATAACACCAGTTACCCATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| CDS-3UTR GCA 90 bp | CTCAAGTGGTCCAGTGGCTTTGGAATATATGTCTACTGGGCATGTGGAATAGAATGTGGAATGAGTTTCTaGACCACCTTACTAAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: LKWSSGFGIYVYWACGIECGMSF*TTLLKA Trigger: AGCCTTTAGTAAGGTGGTGCAGAAACTCATTCCACA...TTCTATTCCACATGCCCAGTAGACATATATTCCAAAGCCACTGGACCACTTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| CDS-3UTR GCA 90 bp | CTGGTAAGGATGGGTAACTGGTGTTATCTCCAGGTCCAAAATATCCCAACTACTAGGGGAACTGTCTGTTaGAATGTAGATTTTGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: LVRMGNWCYLQVQNIPTTRGTVC*NVDFAD Trigger: GTCAGCAAAATCTACATTGCAACAGACAGTTCCCCT...AGTAGTTGGGATATTTTGGACCTGGAGATAACACCAGTTACCCATCCTTACCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| CDS-3UTR GCA 90 bp | CTGGTAAGGATGGGTAACTGGTGTTATCTCCAGGTCCAAAATATCCCAACTACTATAGGAATGTCTTGCTaGAGACTATGTGTCTTCCGA | + |
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Preference number: 4 (lower is better) Translates to: LVRMGNWCYLQVQNIPTTIGMSC*RLCVFR Trigger: TCGGAAGACACATAGTCTGCAGCAAGACATTCCTAT...AGTAGTTGGGATATTTTGGACCTGGAGATAACACCAGTTACCCATCCTTACCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| CDS-3UTR CCA 90 bp | GTTAGCAAGCAAATGCATTTAAAAGGTCTTAGTTGTGCAATGTCCAAAACTGAACACTCCAACTCCCAGTaGACAGTCCCCCAATGCCTT | + |
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Preference number: 4 (lower is better) Translates to: VSKQMHLKGLSCAMSKTEHSNSQ*TVPQCL Trigger: AAGGCATTGGGGGACTGTCCACTGGGAGTTGGAGTG...TTCAGTTTTGGACATTGCACAACTAAGACCTTTTAAATGCATTTGCTTGCTAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| CDS-3UTR TCA 90 bp | CTATGTGTCTTCCGAGTTAGCAAGCAAATGCATTTAAAAGGTCTTAGTTGTGCAGGAGAAACACACACTTaGGTTCTGTGGTCTCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: LCVFRVSKQMHLKGLSCAGETHT*VLWSPE Trigger: TTCTGGAGACCACAGAACTCAAGTGTGTGTTTCTCC...TGCACAACTAAGACCTTTTAAATGCATTTGCTTGCTAACTCGGAAGACACATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373001.4 |
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| CDS-3UTR GCA 90 bp | CTGGTAAGGATGGGTAACTGGTGTTATCTCCAGGTCCAAAATATCCCAACTACTCATGTAGTCATCCTGTaGGTCAATGACGTATATCAA | + |
|
Preference number: 4 (lower is better) Translates to: LVRMGNWCYLQVQNIPTTHVVIL*VNDVYQ Trigger: TTGATATACGTCATTGACGCACAGGATGACTACATG...AGTAGTTGGGATATTTTGGACCTGGAGATAACACCAGTTACCCATCCTTACCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373001.4 |
||
| CDS-3UTR CCA 90 bp | GGAATGTCTTGCTGCAGACTATGTGTCTTCCGAGTTAGCAAGCAAATGCATTTAACCACAGTTGACACTTaGTGTCAGAATACTAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GMSCCRLCVFRVSKQMHLTTVDT*CQNTRD Trigger: GTCTCTAGTATTCTGACACCAAGTGTCAACTGTGGT...TAAATGCATTTGCTTGCTAACTCGGAAGACACATAGTCTGCAGCAAGACATTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373001.4 |
||
| CDS-3UTR CCA 90 bp | GGATGGGTAACTGGTGTTATCTCCAGGTCCAAAATATCCCAACTACTTAAAGGGACTCAAGTGGTCCAGTaGCTTTGGAATATATGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: GWVTGVISRSKISQLLKGTQVVQ*LWNICL Trigger: TAGACATATATTCCAAAGCCACTGGACCACTTGAGT...CCCTTTAAGTAGTTGGGATATTTTGGACCTGGAGATAACACCAGTTACCCATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373001.4 |
||
| CDS-3UTR CCA 90 bp | CTCAAGTGGTCCAGTGGCTTTGGAATATATGTCTACTGGGCATGTGGAATAGAAACTTATGTACTCAAGTaGTCCAGTGGCTTTGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: LKWSSGFGIYVYWACGIETYVLK*SSGFGI Trigger: TATTCCAAAGCCACTGGACCACTTGAGTACATAAGT...TTCTATTCCACATGCCCAGTAGACATATATTCCAAAGCCACTGGACCACTTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373001.4 |
||
| CDS-3UTR TCA 90 bp | AGTAGCTTCAGTTGTACACCACCAGTTGAAGGGGTTTTCATCCAAATGAGAAACTCCAAAACTGAAATCTaGGAGGCAGTGTTAGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: SSFSCTPPVEGVFIQMRNSKTEI*EAVLEL Trigger: AAGTTCTAACACTGCCTCTCAGATTTCAGTTTTGGA...GTTTCTCATTTGGATGAAAACCCCTTCAACTGGTGGTGTACAACTGAAGCTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000373001.4 |
||
| CDS-3UTR GCA 90 bp | CTCAAGTGGTCCAGTGGCTTTGGAATATATGTCTACTGGGCATGTGGAATAGAATTTCTTCCCTTAGAATaGAGACCAGTGCCAAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: LKWSSGFGIYVYWACGIEFLPLE*RPVPKI Trigger: AATTTTTGGCACTGGTCTGCATTCTAAGGGAAGAAA...TTCTATTCCACATGCCCAGTAGACATATATTCCAAAGCCACTGGACCACTTGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373001.4 |
||
| CDS-3UTR GCA 90 bp | AGTACCACAGTTGACACTTGGTGTCAGAATACTAGAGACAAAGTATGTAAAACACAAGTCAGAATCACCTaGAGGAAGCACTCCAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: STTVDTWCQNTRDKVCKTQVRIT*RKHSKS Trigger: TGACTTGGAGTGCTTCCTGCAGGTGATTCTGACTTG...TGTTTTACATACTTTGTCTCTAGTATTCTGACACCAAGTGTCAACTGTGGTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373001.4 |
||
| CDS-3UTR TCA 90 bp | CATATCCTAGGCAAAGAAAGTACCACAGTTGACACTTGGTGTCAGAATACTAGAACCTCAAAAACCTCATaGATAGCTTTTCGGAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: HILGKESTTVDTWCQNTRTSKTS*IAFRKQ Trigger: CTGTTTCCGAAAAGCTATTCATGAGGTTTTTGAGGT...TCTAGTATTCTGACACCAAGTGTCAACTGTGGTACTTTCTTTGCCTAGGATATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373001.4 |
||
| CDS-3UTR TCA 90 bp | CTATGTGTCTTCCGAGTTAGCAAGCAAATGCATTTAAAAGGTCTTAGTTGTGCAAGAAAGTACCACAGTTaGCACTTGGTGTCAGAATAC | + |
|
Preference number: 4 (lower is better) Translates to: LCVFRVSKQMHLKGLSCARKYHS*HLVSEY Trigger: GTATTCTGACACCAAGTGTCAACTGTGGTACTTTCT...TGCACAACTAAGACCTTTTAAATGCATTTGCTTGCTAACTCGGAAGACACATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373001.4 |
||
| CDS-3UTR GCA 90 bp | AGTACCACAGTTGACACTTGGTGTCAGAATACTAGAGACAAAGTATGTAAAACAAAGTATGTAAAACAATaGCTGTTGCAGCACCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: STTVDTWCQNTRDKVCKTKYVKQ*LLQHHV Trigger: CACGTGGTGCTGCAACAGGCATTGTTTTACATACTT...TGTTTTACATACTTTGTCTCTAGTATTCTGACACCAAGTGTCAACTGTGGTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373001.4 |
||
| CDS-3UTR CCA 90 bp | GGAATGTCTTGCTGCAGACTATGTGTCTTCCGAGTTAGCAAGCAAATGCATTTACTCAAAATTCATGTCTaGGTTAACTTTGTAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GMSCCRLCVFRVSKQMHLLKIHV*VNFVGF Trigger: AAAGCCTACAAAGTTAACCCAGACATGAATTTTGAG...TAAATGCATTTGCTTGCTAACTCGGAAGACACATAGTCTGCAGCAAGACATTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373001.4 |
||
| CDS-3UTR CCA 90 bp | ACTTATGTACTCAAGTGGTCCAGTGGCTTTGGAATATATGTCTACTGGGCATGTTATTGCATTAAACAGTaGCACTTATGTACTCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TYVLKWSSGFGIYVYWACYCIKQ*HLCTQV Trigger: CACTTGAGTACATAAGTGCCACTGTTTAATGCAATA...ACATGCCCAGTAGACATATATTCCAAAGCCACTGGACCACTTGAGTACATAAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373001.4 |
||
| CDS-3UTR GCA 90 bp | CTATGTGTCTTCCGAGTTAGCAAGCAAATGCATTTAAAAGGTCTTAGTTGTGCAAATATAGGAATGTCTTaGTGCAGACTATGTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LCVFRVSKQMHLKGLSCANIGMS*CRLCVF Trigger: GAAGACACATAGTCTGCAGCAAGACATTCCTATATT...TGCACAACTAAGACCTTTTAAATGCATTTGCTTGCTAACTCGGAAGACACATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373001.4 |
||
| CDS-3UTR CCA 90 bp | AGTACCACAGTTGACACTTGGTGTCAGAATACTAGAGACAAAGTATGTAAAACAAAAAGAGGGTCTCGTTaGGTGACATCTTATGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: STTVDTWCQNTRDKVCKTKRGSR*VTSYET Trigger: TGTTTCATAAGATGTCACCCAACGAGACCCTCTTTT...TGTTTTACATACTTTGTCTCTAGTATTCTGACACCAAGTGTCAACTGTGGTACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373001.4 |
||
| CDS-3UTR CCA 90 bp | AGTACCACAGTTGACACTTGGTGTCAGAATACTAGAGACAAAGTATGTAAAACAGGAATATATGTCTACTaGGCATGTGGAATAGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: STTVDTWCQNTRDKVCKTGIYVY*ACGIEI Trigger: TATTTCTATTCCACATGCCCAGTAGACATATATTCC...TGTTTTACATACTTTGTCTCTAGTATTCTGACACCAAGTGTCAACTGTGGTACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373001.4 |
||
| CDS TCA 90 bp | CCGTACTGCAGGGACATGGTGCTGGAGCCGCCGCCGCCCGCGCCCTaGCAGGCCAGGCCAGGCCGAGCCAGGCCGCCGCCTCCCCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PYCRDMVLEPPPPAP*QARPGRARPPPPQS Trigger: GGACTGGGGAGGCGGCGGCCTGGCTCGGCCTGGCCTGGCCTGTCAGGGCGCGGGCGGCGGCGGCTCCAGCACCATGTCCCTGCAGTACGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373001.4 |
||
| CDS GCA 90 bp | TGCCGGCGAGGGGCGTCTCCTCCGCCCCGTACTGCAGGGACATGGTaGTGGAGCCGCCGCCGCCCGCGCCCTGACAGGCCAGGCCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CRRGASPPPRTAGTW*WSRRRPRPDRPGQA Trigger: GGCCTGGCCTGGCCTGTCAGGGCGCGGGCGGCGGCGGCTCCAGCACCATGTCCCTGCAGTACGGGGCGGAGGAGACGCCCCTCGCCGGCA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373001.4 |
||
| CDS CCA 90 bp | CGGCGAGGGGCGTCTCCTCCGCCCCGTACTGCAGGGACATGGTGCTaGAGCCGCCGCCGCCCGCGCCCTGACAGGCCAGGCCAGGCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: RRGASPPPRTAGTWC*SRRRPRPDRPGQAE Trigger: CTCGGCCTGGCCTGGCCTGTCAGGGCGCGGGCGGCGGCGGCTCCAGCACCATGTCCCTGCAGTACGGGGCGGAGGAGACGCCCCTCGCCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373001.4 |
||
| CDS GCA 90 bp | CGCCGTAGCCGAAGTCCTTTGGAAACGAATCGGCCGCGCCGTAACTaGCGGCGAGGGGCGTCTCCTCCGCCCCGTACTGCAGGGACATGG | + |
|
Preference number: 5 (lower is better) Translates to: RRSRSPLETNRPRRN*RRGASPPPRTAGTW Trigger: CCATGTCCCTGCAGTACGGGGCGGAGGAGACGCCCCTCGCCGGCAGTTACGGCGCGGCCGATTCGTTTCCAAAGGACTTCGGCTACGGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373001.4 |
||
| CDS CCA 90 bp | TGGCACAGAGCCCCGACGCTGGGATTCAGACTAGATGGCGTTTCGTaGCGTGCCATTGTGTGTCAGCGCTTTCAGACTGGAGGCACTAGT | + |
|
Preference number: 5 (lower is better) Translates to: WHRAPTLGFRLDGVS*RAIVCQRFQTGGTS Trigger: ACTAGTGCCTCCAGTCTGAAAGCGCTGACACACAATGGCACGCCACGAAACGCCATCTAGTCTGAATCCCAGCGTCGGGGCTCTGTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373001.4 ENST00000474456.1 |
||
| CDS-3UTR CAA 90 bp | CAGTCCCCCAATGCCTTAGGGTCACTCGTGGTCAACCAAATGCAATCAAGAAGCTTCTGGATGGAGGACTaGCCGCTGCGCCGGAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: QSPNALGSLVVNQMQSRSFWMED*PLRRSP Trigger: GGGACTCCGGCGCAGCGGCAAGTCCTCCATCCAGAA...GCTTCTTGATTGCATTTGGTTGACCACGAGTGACCCTAAGGCATTGGGGGACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373001.4 |
||
| CDS-3UTR CAA 90 bp | GTTGCAGCACCACGTGCTCACTCCAACTCCCAGTGGACAGTCCCCCAATGCCTTCTAATGCAACCACCGTaGAGCCTTGCTCTCCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: VAAPRAHSNSQWTVPQCLLMQPP*SLALHL Trigger: CAGGTGGAGAGCAAGGCTCAACGGTGGTTGCATTAG...AAGGCATTGGGGGACTGTCCACTGGGAGTTGGAGTGAGCACGTGGTGCTGCAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373001.4 |
||
| CDS-3UTR CAA 90 bp | ACTCCAACTCCCAGTGGACAGTCCCCCAATGCCTTAGGGTCACTCGTGGTCAACGTTGTACACCACCAGTaGAAGGGGTTTTCATCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: TPTPSGQSPNALGSLVVNVVHHQ*KGFSSK Trigger: TTTGGATGAAAACCCCTTCAACTGGTGGTGTACAAC...GTTGACCACGAGTGACCCTAAGGCATTGGGGGACTGTCCACTGGGAGTTGGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373001.4 |
||
| CDS-3UTR CAA 90 bp | GTTGCAGCACCACGTGCTCACTCCAACTCCCAGTGGACAGTCCCCCAATGCCTTTATTTTCAACTGGAATaGATGGCAACATTCCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: VAAPRAHSNSQWTVPQCLYFQLE*MATFPG Trigger: ACCAGGGAATGTTGCCATCAATTCCAGTTGAAAATA...AAGGCATTGGGGGACTGTCCACTGGGAGTTGGAGTGAGCACGTGGTGCTGCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373001.4 |
||
| CDS-3UTR CAA 90 bp | CAGTCCCCCAATGCCTTAGGGTCACTCGTGGTCAACCAAATGCAATCAAGAAGCGTAAAACAATGCCTGTaGCAGCACCACGTGCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: QSPNALGSLVVNQMQSRSVKQCL*QHHVLT Trigger: AGTGAGCACGTGGTGCTGCAACAGGCATTGTTTTAC...GCTTCTTGATTGCATTTGGTTGACCACGAGTGACCCTAAGGCATTGGGGGACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373001.4 |
||
| CDS GCA 90 bp | CCATGTAGTCATCCTGCACAATGCATGTCTGCTCCCAAAGCACTCTaGAACTGCATCTCTTACACTGTTAGGGAATCTACTGCCAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PCSHPAQCMSAPKAL*NCISYTVRESTAKE Trigger: CTCTTTGGCAGTAGATTCCCTAACAGTGTAAGAGATGCAGTTGCAGAGTGCTTTGGGAGCAGACATGCATTGTGCAGGATGACTACATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493015.1 |
||
| CDS GCA 90 bp | AGTCATCCTGCACAATGCATGTCTGCTCCCAAAGCACTCTGCAACTaGATCTCTTACACTGTTAGGGAATCTACTGCCAAAGAGATAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SHPAQCMSAPKALCN*ISYTVRESTAKEIS Trigger: GCTTATCTCTTTGGCAGTAGATTCCCTAACAGTGTAAGAGATGCAGTTGCAGAGTGCTTTGGGAGCAGACATGCATTGTGCAGGATGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493015.1 |
||
| CDS-3UTR CAA 90 bp | CTGGTAAGGATGGGTAACTGGTGTTATCTCCAGGTCCAAAATATCCCAACTACTGTCATCATTGGCCCTTaGATGAATGTCCCTCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LVRMGNWCYLQVQNIPTTVIIGP*MNVPLC Trigger: ACACAGAGGGACATTCATCAAAGGGCCAATGATGAC...AGTAGTTGGGATATTTTGGACCTGGAGATAACACCAGTTACCCATCCTTACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373001.4 |
||
| CDS-3UTR CAA 90 bp | GGAATGTCTTGCTGCAGACTATGTGTCTTCCGAGTTAGCAAGCAAATGCATTTATTCCAAGGTCGGCAGTaGTGGAATGAGTTTCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: GMSCCRLCVFRVSKQMHLFQGRQ*WNEFLH Trigger: GTGCAGAAACTCATTCCACAACTGCCGACCTTGGAA...TAAATGCATTTGCTTGCTAACTCGGAAGACACATAGTCTGCAGCAAGACATTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373001.4 |
||
| CDS-3UTR CAA 90 bp | AGTAGCTTCAGTTGTACACCACCAGTTGAAGGGGTTTTCATCCAAATGAGAAACGAGAAACTCTACCCCTaGTCTCTAGTGGAACAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SSFSCTPPVEGVFIQMRNEKLYP*SLVEQA Trigger: TGCCTGTTCCACTAGAGACAAGGGGTAGAGTTTCTC...GTTTCTCATTTGGATGAAAACCCCTTCAACTGGTGGTGTACAACTGAAGCTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000373001.4 |
||
| CDS-3UTR CAA 90 bp | CTGGTAAGGATGGGTAACTGGTGTTATCTCCAGGTCCAAAATATCCCAACTACTAGTGGTCCAGTGGCTTaGGAATATATGTCTACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LVRMGNWCYLQVQNIPTTSGPVA*EYMSTG Trigger: CCCAGTAGACATATATTCCAAAGCCACTGGACCACT...AGTAGTTGGGATATTTTGGACCTGGAGATAACACCAGTTACCCATCCTTACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373001.4 |
||
| CDS CCA 90 bp | CATCCTTATAAATCTTGTTGGTACTTTCCAAAAAGAGGGTCTCGTTaGGTGACATCTTATGAAACACCACCTTCTGGATGGAGGACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: HPYKSCWYFPKRGSR*VTSYETPPSGWRTC Trigger: GCAAGTCCTCCATCCAGAAGGTGGTGTTTCATAAGATGTCACCCAACGAGACCCTCTTTTTGGAAAGTACCAACAAGATTTATAAGGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373001.4 |
||
| CDS-3UTR CAA 90 bp | CTGGTAAGGATGGGTAACTGGTGTTATCTCCAGGTCCAAAATATCCCAACTACTGCAAAGTTCATAAGATaGCATATCCACAGGGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: LVRMGNWCYLQVQNIPTTAKFIR*HIHRGT Trigger: AGTTCCCCTGTGGATATGCAATCTTATGAACTTTGC...AGTAGTTGGGATATTTTGGACCTGGAGATAACACCAGTTACCCATCCTTACCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373001.4 |
||
| CDS-3UTR CAA 90 bp | TTTGTTACACTGAGCATGATCATTTATCTAATGCAGAAGAAAGAACCCAGACATTTTCGTGGCGTGCCATaGTGTGTCAGCGCTTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: FVTLSMIIYLMQKKEPRHFRGVP*CVSAFR Trigger: TCTGAAAGCGCTGACACACAATGGCACGCCACGAAA...ATGTCTGGGTTCTTTCTTCTGCATTAGATAAATGATCATGCTCAGTGTAACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373001.4 |
||
| CDS TCA 90 bp | TCAATAAAGCCTCTTTATCTTGTCTACCATACCCATCACTCAAGATaGCAAATACACTTTCCCACCTGGCTTCATCTCTTTACTGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: SIKPLYLVYHTHHSR*QIHFPTWLHLFTAF Trigger: AAATGCAGTAAAGAGATGAAGCCAGGTGGGAAAGTGTATTTGTCATCTTGAGTGATGGGTATGGTAGACAAGATAAAGAGGCTTTATTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000496778.1 |
||
| CDS-3UTR CAA 90 bp | AGTACCACAGTTGACACTTGGTGTCAGAATACTAGAGACAAAGTATGTAAAACACAATATAGGAATGTCTaGCTGCAGACTATGTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: STTVDTWCQNTRDKVCKTQYRNV*LQTMCL Trigger: AAGACACATAGTCTGCAGCAAGACATTCCTATATTG...TGTTTTACATACTTTGTCTCTAGTATTCTGACACCAAGTGTCAACTGTGGTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373001.4 |
||
| CDS-3UTR CAA 90 bp | AGTACCACAGTTGACACTTGGTGTCAGAATACTAGAGACAAAGTATGTAAAACAAAGAAAGTACCACAGTaGACACTTGGTGTCAGAATA | + |
|
Preference number: 5 (lower is better) Translates to: STTVDTWCQNTRDKVCKTKKVPQ*TLGVRI Trigger: TATTCTGACACCAAGTGTCAACTGTGGTACTTTCTT...TGTTTTACATACTTTGTCTCTAGTATTCTGACACCAAGTGTCAACTGTGGTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373001.4 |
||
| CDS CCA 72 bp | GCGTCTCCTCCGCCCCGTACTGCAGGGACATGGTGCTaGAGCCGCCGCCGCCCGCGCCCTGACAGGCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: ASPPPRTAGTWC*SRRRPRPDRPG Trigger: GCCTGGCCTGTCAGGGCGCGGGCGGCGGCGGCTCCAGCACCATGTCCCTGCAGTACGGGGCGGAGGAGACGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373001.4 |
||
| CDS GCA 72 bp | CGAAGTCCTTTGGAAACGAATCGGCCGCGCCGTAACTaGCGGCGAGGGGCGTCTCCTCCGCCCCGTACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: RSPLETNRPRRN*RRGASPPPRTA Trigger: TGCAGTACGGGGCGGAGGAGACGCCCCTCGCCGGCAGTTACGGCGCGGCCGATTCGTTTCCAAAGGACTTCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373001.4 |
||
| CDS CCA 72 bp | CTCTTCCTCCTCCTCCACGCCGTAGCCGAAGTCCTTTaGAAACGAATCGGCCGCGCCGTAACTGCCGGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: LFLLLHAVAEVL*KRIGRAVTAGE Trigger: CTCGCCGGCAGTTACGGCGCGGCCGATTCGTTTCCAAAGGACTTCGGCTACGGCGTGGAGGAGGAGGAAGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373001.4 |
||
| CDS CCA 72 bp | CTGGCACAGAGCCCCGACGCTGGGATTCAGACTAGATaGCGTTTCGTGGCGTGCCATTGTGTGTCAGCGCTT | + |
|
Preference number: 6 (lower is better) Translates to: LAQSPDAGIQTR*RFVACHCVSAL Trigger: AAGCGCTGACACACAATGGCACGCCACGAAACGCCATCTAGTCTGAATCCCAGCGTCGGGGCTCTGTGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373001.4 ENST00000474456.1 |
||
| CDS CCA 72 bp | GCCCCGACGCTGGGATTCAGACTAGATGGCGTTTCGTaGCGTGCCATTGTGTGTCAGCGCTTTCAGACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: APTLGFRLDGVS*RAIVCQRFQTG Trigger: TCCAGTCTGAAAGCGCTGACACACAATGGCACGCCACGAAACGCCATCTAGTCTGAATCCCAGCGTCGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373001.4 ENST00000474456.1 |
||
| CDS GCA 72 bp | GACGCTGGGATTCAGACTAGATGGCGTTTCGTGGCGTaGCATTGTGTGTCAGCGCTTTCAGACTGGAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: DAGIQTRWRFVA*HCVSALSDWRH Trigger: GTGCCTCCAGTCTGAAAGCGCTGACACACAATGGCACGCCACGAAACGCCATCTAGTCTGAATCCCAGCGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373001.4 ENST00000474456.1 |
||
| CDS GCA 72 bp | GCACAATGCATGTCTGCTCCCAAAGCACTCTGCAACTaGATCTCTTACACTGTTAGGGAATCTACTGCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: AQCMSAPKALCN*ISYTVRESTAK Trigger: TTTGGCAGTAGATTCCCTAACAGTGTAAGAGATGCAGTTGCAGAGTGCTTTGGGAGCAGACATGCATTGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493015.1 |
||
| CDS GCA 72 bp | CATCCTGCACAATGCATGTCTGCTCCCAAAGCACTCTaGAACTGCATCTCTTACACTGTTAGGGAATCTACT | + |
|
Preference number: 6 (lower is better) Translates to: HPAQCMSAPKAL*NCISYTVREST Trigger: AGTAGATTCCCTAACAGTGTAAGAGATGCAGTTGCAGAGTGCTTTGGGAGCAGACATGCATTGTGCAGGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493015.1 |
||
| CDS TCA 72 bp | CTTGTTGGTACTTTCCAAAAAGAGGGTCTCGTTGGGTaGCATCTTATGAAACACCACCTTCTGGATGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LVGTFQKEGLVG*HLMKHHLLDGG Trigger: TCCTCCATCCAGAAGGTGGTGTTTCATAAGATGTCACCCAACGAGACCCTCTTTTTGGAAAGTACCAACAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373001.4 |
||
| CDS TCA 72 bp | CCTCTTTATCTTGTCTACCATACCCATCACTCAAGATaGCAAATACACTTTCCCACCTGGCTTCATCTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: PLYLVYHTHHSR*QIHFPTWLHLF Trigger: AAAGAGATGAAGCCAGGTGGGAAAGTGTATTTGTCATCTTGAGTGATGGGTATGGTAGACAAGATAAAGAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000496778.1 |
||
| CDS CAA 72 bp | TACAACATCGATCATGTCACAGCAAAGTTCATAAGATaGCATATCCACAGGGGAACTGTCTGTTGCAATGTA | + |
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Preference number: 6 (lower is better) Translates to: YNIDHVTAKFIR*HIHRGTVCCNV Trigger: TACATTGCAACAGACAGTTCCCCTGTGGATATGCAATCTTATGAACTTTGCTGTGACATGATCGATGTTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000373001.4 ENST00000493015.1 ENST00000496778.1 |
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| CDS GCA 72 bp | TACACTGTTAGGGAATCTACTGCCAAAGAGATAAGCTaGAACCACATGACAAAGAAGATAAACAACTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: YTVRESTAKEIS*NHMTKKINNFP Trigger: AGGAAAGTTGTTTATCTTCTTTGTCATGTGGTTGCAGCTTATCTCTTTGGCAGTAGATTCCCTAACAGTGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493015.1 |
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| CDS CAA 72 bp | CCTCACTTAGATGAGCTCCTTCGAGGCATATTCTATTaGCCAGGTCAATCACATTTTCACAGAAAACATATT | + |
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Preference number: 6 (lower is better) Translates to: PHLDELLRGIFY*PGQSHFHRKHI Trigger: AATATGTTTTCTGTGAAAATGTGATTGACCTGGCAAATAGAATATGCCTCGAAGGAGCTCATCTAAGTGAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000474456.1 |
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