Pregenerated sensors for RRAGB (Homo sapiens)
Ensembl gene IDs: ENSG00000083750Ensembl transcript IDs: ENST00000262850.7, ENST00000374941.9, ENST00000414239.5, ENST00000474757.1, ENST00000498762.1
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TACTTACTATCTGATAAGGAATACAAGATGATGCCGAGAAAGGCTTaGGCAAACACAACTATTGGAACCAGGTTACCAGTACATTTAAAC | + |
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Preference number: 1 (lower is better) Translates to: YLLSDKEYKMMPRKA*ANTTIGTRLPVHLN Trigger: GTTTAAATGTACTGGTAACCTGGTTCCAATAGTTGTGTTTGCCCAAGCCTTTCTCGGCATCATCTTGTATTCCTTATCAGATAGTAAGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| 3UTR-3UTR TCA 90 bp | TGGGCAAACACAACTATTGGAACCAGGTTACCAGTACATTTAAACACTATTAGAGTAACACCGACTTCATaGACAATTCATCTTCTAACT | + |
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Preference number: 2 (lower is better) Translates to: WANTTIGTRLPVHLNTIRVTPTS*TIHLLT Trigger: AGTTAGAAGATGAATTGTTCATGAAGTCGGTGTTAC...TCTAATAGTGTTTAAATGTACTGGTAACCTGGTTCCAATAGTTGTGTTTGCCCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| CDS-3UTR TCA 90 bp | AAGATGATGCCGAGAAAGGCTTGGGCAAACACAACTATTGGAACCAGGTTACCATCACCCGCAAAGAGGTaGGGACCGCGAAGGCGGAGG | + |
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Preference number: 4 (lower is better) Translates to: KMMPRKAWANTTIGTRLPSPAKR*GPRRRR Trigger: CCTCCGCCTTCGCGGTCCTCACCTCTTTGCGGGTGA...TGGTAACCTGGTTCCAATAGTTGTGTTTGCCCAAGCCTTTCTCGGCATCATCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| CDS-3UTR CCA 90 bp | GAATACAAGATGATGCCGAGAAAGGCTTGGGCAAACACAACTATTGGAACCAGGGGAGAACGCCTCAGCTaGCTCGTGGCTTCCGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: EYKMMPRKAWANTTIGTRGERLS*LVASEP Trigger: GGGCTCGGAAGCCACGAGCCAGCTGAGGCGTTCTCC...CCTGGTTCCAATAGTTGTGTTTGCCCAAGCCTTTCTCGGCATCATCTTGTATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| CDS-3UTR GCA 90 bp | AAGGAATACAAGATGATGCCGAGAAAGGCTTGGGCAAACACAACTATTGGAACCCCGCAGCCACCCAACTaGAGGCCAGGATCACGTGGG | + |
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Preference number: 4 (lower is better) Translates to: KEYKMMPRKAWANTTIGTPQPPN*RPGSRG Trigger: CCCACGTGATCCTGGCCTGCAGTTGGGTGGCTGCGG...GGTTCCAATAGTTGTGTTTGCCCAAGCCTTTCTCGGCATCATCTTGTATTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| CDS-3UTR CCA 90 bp | AAGGAATACAAGATGATGCCGAGAAAGGCTTGGGCAAACACAACTATTGGAACCTCCGCCTTTGTCCACTaGGGGGCCGCTTTCCCCACG | + |
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Preference number: 4 (lower is better) Translates to: KEYKMMPRKAWANTTIGTSAFVH*GAAFPT Trigger: CGTGGGGAAAGCGGCCCCCCAGTGGACAAAGGCGGA...GGTTCCAATAGTTGTGTTTGCCCAAGCCTTTCTCGGCATCATCTTGTATTCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| CDS-3UTR GCA 90 bp | TGCCGAGAAAGGCTTGGGCAAACACAACTATTGGAACCAGGTTACCAGTACATTTATGGCCCTCAGGCCTaGTCTATTCTTGCCTCCGCC | + |
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Preference number: 4 (lower is better) Translates to: CRERLGQTQLLEPGYQYIYGPQA*SILASA Trigger: GGCGGAGGCAAGAATAGAGCAGGCCTGAGGGCCATA...AATGTACTGGTAACCTGGTTCCAATAGTTGTGTTTGCCCAAGCCTTTCTCGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| CDS-3UTR CCA 90 bp | GATGCCGAGAAAGGCTTGGGCAAACACAACTATTGGAACCAGGTTACCAGTACAAAGGCACGGCCGAGCTaGCTAGCTTTAAGGCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: DAEKGLGKHNYWNQVTSTKARPS*LALRPS Trigger: ACTTGGCCTTAAAGCTAGCCAGCTCGGCCGTGCCTT...TGTACTGGTAACCTGGTTCCAATAGTTGTGTTTGCCCAAGCCTTTCTCGGCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| CDS-3UTR CCA 90 bp | TGGGCAAACACAACTATTGGAACCAGGTTACCAGTACATTTAAACACTATTAGAGCCTCAGCTGGCTCGTaGCTTCCGAGCCCGGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: WANTTIGTRLPVHLNTIRASAGS*LPSPAA Trigger: AGCGGCCGGGCTCGGAAGCCACGAGCCAGCTGAGGC...TCTAATAGTGTTTAAATGTACTGGTAACCTGGTTCCAATAGTTGTGTTTGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| CDS-3UTR GCA 90 bp | AAGATGATGCCGAGAAAGGCTTGGGCAAACACAACTATTGGAACCAGGTTACCAGGCCTGCTCTATTCTTaGCTCCGCCTTTGTCCACTG | + |
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Preference number: 4 (lower is better) Translates to: KMMPRKAWANTTIGTRLPGLLYS*LRLCPL Trigger: CAGTGGACAAAGGCGGAGGCAAGAATAGAGCAGGCC...TGGTAACCTGGTTCCAATAGTTGTGTTTGCCCAAGCCTTTCTCGGCATCATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| CDS-3UTR CCA 90 bp | TGCCGAGAAAGGCTTGGGCAAACACAACTATTGGAACCAGGTTACCAGTACATTTTTATCTCTCGAACCTaGCCTCAAGGCACGGCCGAG | + |
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Preference number: 4 (lower is better) Translates to: CRERLGQTQLLEPGYQYIFISRT*PQGTAE Trigger: CTCGGCCGTGCCTTGAGGCCAGGTTCGAGAGATAAA...AATGTACTGGTAACCTGGTTCCAATAGTTGTGTTTGCCCAAGCCTTTCTCGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| CDS-3UTR GCA 90 bp | GAATACAAGATGATGCCGAGAAAGGCTTGGGCAAACACAACTATTGGAACCAGGTCCATGAAGGTGTCTTaGCCACCACAATCCCACAGG | + |
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Preference number: 4 (lower is better) Translates to: EYKMMPRKAWANTTIGTRSMKVS*PPQSHR Trigger: CCTGTGGGATTGTGGTGGGCAAGACACCTTCATGGA...CCTGGTTCCAATAGTTGTGTTTGCCCAAGCCTTTCTCGGCATCATCTTGTATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| CDS-3UTR CCA 90 bp | GAATACAAGATGATGCCGAGAAAGGCTTGGGCAAACACAACTATTGGAACCAGGCAGGCCCCCAAGGTCTaGAAACCCAAAGGTAACTTC | + |
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Preference number: 4 (lower is better) Translates to: EYKMMPRKAWANTTIGTRQAPKV*KPKGNF Trigger: GAAGTTACCTTTGGGTTTCCAGACCTTGGGGGCCTG...CCTGGTTCCAATAGTTGTGTTTGCCCAAGCCTTTCTCGGCATCATCTTGTATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| CDS-3UTR CCA 90 bp | GATGCCGAGAAAGGCTTGGGCAAACACAACTATTGGAACCAGGTTACCAGTACACTGACTTCCATACTCTaGAAAGAGGCAGCCAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: DAEKGLGKHNYWNQVTSTLTSIL*KEAASL Trigger: CAAGCTGGCTGCCTCTTTCCAGAGTATGGAAGTCAG...TGTACTGGTAACCTGGTTCCAATAGTTGTGTTTGCCCAAGCCTTTCTCGGCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| CDS-3UTR CCA 90 bp | GATGCCGAGAAAGGCTTGGGCAAACACAACTATTGGAACCAGGTTACCAGTACAGGCCAAGTGATTCCGTaGTACAAAGTAAGAGTTGGA | + |
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Preference number: 4 (lower is better) Translates to: DAEKGLGKHNYWNQVTSTGQVIP*YKVRVG Trigger: TCCAACTCTTACTTTGTACCACGGAATCACTTGGCC...TGTACTGGTAACCTGGTTCCAATAGTTGTGTTTGCCCAAGCCTTTCTCGGCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| CDS-3UTR CCA 90 bp | GATGCCGAGAAAGGCTTGGGCAAACACAACTATTGGAACCAGGTTACCAGTACAGGCGACGTGTGTCTCTaGCAATATAATTTGCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: DAEKGLGKHNYWNQVTSTGDVCL*QYNLQR Trigger: TCTTTGCAAATTATATTGCCAGAGACACACGTCGCC...TGTACTGGTAACCTGGTTCCAATAGTTGTGTTTGCCCAAGCCTTTCTCGGCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| CDS-3UTR CCA 90 bp | GAATACAAGATGATGCCGAGAAAGGCTTGGGCAAACACAACTATTGGAACCAGGGCTGATAAACTATGCTaGACCAAGCCTTATAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: EYKMMPRKAWANTTIGTRADKLC*TKPYRG Trigger: CCCTCTATAAGGCTTGGTCCAGCATAGTTTATCAGC...CCTGGTTCCAATAGTTGTGTTTGCCCAAGCCTTTCTCGGCATCATCTTGTATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| CDS-3UTR GCA 90 bp | GATAAGGAATACAAGATGATGCCGAGAAAGGCTTGGGCAAACACAACTATTGGATTCTACATCAATTGTTaGGCCAAGGCGACGTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: DKEYKMMPRKAWANTTIGFYINC*AKATCV Trigger: GACACACGTCGCCTTGGCGCAACAATTGATGTAGAA...TCCAATAGTTGTGTTTGCCCAAGCCTTTCTCGGCATCATCTTGTATTCCTTATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| CDS-3UTR GCA 90 bp | GATAAGGAATACAAGATGATGCCGAGAAAGGCTTGGGCAAACACAACTATTGGATTTTCACCCCTCAACTaGCTATTCTCATCGCCTATG | + |
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Preference number: 4 (lower is better) Translates to: DKEYKMMPRKAWANTTIGFSPLN*LFSSPM Trigger: CATAGGCGATGAGAATAGGCAGTTGAGGGGTGAAAA...TCCAATAGTTGTGTTTGCCCAAGCCTTTCTCGGCATCATCTTGTATTCCTTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| CDS-3UTR GCA 90 bp | TCTGATAAGGAATACAAGATGATGCCGAGAAAGGCTTGGGCAAACACAACTATTCGCATGAGAAGACACTaGTTTGGTCCATCCACTCTT | + |
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Preference number: 4 (lower is better) Translates to: SDKEYKMMPRKAWANTTIRMRRH*FGPSTL Trigger: AAGAGTGGATGGACCAAAGCAGTGTCTTCTCATGCG...AATAGTTGTGTTTGCCCAAGCCTTTCTCGGCATCATCTTGTATTCCTTATCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| CDS-3UTR TCA 90 bp | TGCCGAGAAAGGCTTGGGCAAACACAACTATTGGAACCAGGTTACCAGTACATTCCCAGAAATCGAACATaGGAATGTTCTACATCAATT | + |
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Preference number: 4 (lower is better) Translates to: CRERLGQTQLLEPGYQYIPRNRT*ECSTSI Trigger: AATTGATGTAGAACATTCTCATGTTCGATTTCTGGG...AATGTACTGGTAACCTGGTTCCAATAGTTGTGTTTGCCCAAGCCTTTCTCGGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| CDS-3UTR TCA 90 bp | AGAAAGGCTTGGGCAAACACAACTATTGGAACCAGGTTACCAGTACATTTAAACTCAATGTTTAGCGCATaGGAAGACACTGCTTTGGTC | + |
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Preference number: 4 (lower is better) Translates to: RKAWANTTIGTRLPVHLNSMFSA*EDTALV Trigger: GACCAAAGCAGTGTCTTCTCATGCGCTAAACATTGA...GTTTAAATGTACTGGTAACCTGGTTCCAATAGTTGTGTTTGCCCAAGCCTTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| CDS-3UTR CCA 90 bp | TGGGCAAACACAACTATTGGAACCAGGTTACCAGTACATTTAAACACTATTAGATATTCTCATCGCCTATaGCCCTCAGGCCTGCTCTAT | + |
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Preference number: 4 (lower is better) Translates to: WANTTIGTRLPVHLNTIRYSHRL*PSGLLY Trigger: ATAGAGCAGGCCTGAGGGCCATAGGCGATGAGAATA...TCTAATAGTGTTTAAATGTACTGGTAACCTGGTTCCAATAGTTGTGTTTGCCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| CDS-3UTR CCA 90 bp | AAGATGATGCCGAGAAAGGCTTGGGCAAACACAACTATTGGAACCAGGTTACCACCAAGCAAAATATTTTaGCATCTGGAGAATTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: KMMPRKAWANTTIGTRLPPSKIF*HLENSA Trigger: TGCAGAATTCTCCAGATGCCAAAATATTTTGCTTGG...TGGTAACCTGGTTCCAATAGTTGTGTTTGCCCAAGCCTTTCTCGGCATCATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| CDS-3UTR CCA 90 bp | AGAAAGGCTTGGGCAAACACAACTATTGGAACCAGGTTACCAGTACATTTAAACACAAGAACATTCCAATaGGCGAGACAAACGCCTCAA | + |
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Preference number: 4 (lower is better) Translates to: RKAWANTTIGTRLPVHLNTRTFQ*ARQTPQ Trigger: TTGAGGCGTTTGTCTCGCCCATTGGAATGTTCTTGT...GTTTAAATGTACTGGTAACCTGGTTCCAATAGTTGTGTTTGCCCAAGCCTTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| CDS-3UTR TCA 90 bp | AAGGAATACAAGATGATGCCGAGAAAGGCTTGGGCAAACACAACTATTGGAACCGTAACACCGACTTCATaGACAATTCATCTTCTAACT | + |
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Preference number: 4 (lower is better) Translates to: KEYKMMPRKAWANTTIGTVTPTS*TIHLLT Trigger: AGTTAGAAGATGAATTGTTCATGAAGTCGGTGTTAC...GGTTCCAATAGTTGTGTTTGCCCAAGCCTTTCTCGGCATCATCTTGTATTCCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| CDS-3UTR CCA 90 bp | TCTGATAAGGAATACAAGATGATGCCGAGAAAGGCTTGGGCAAACACAACTATTGGCAAACACAACTATTaGAACCAGGTTACCAGTACA | + |
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Preference number: 4 (lower is better) Translates to: SDKEYKMMPRKAWANTTIGKHNY*NQVTST Trigger: TGTACTGGTAACCTGGTTCCAATAGTTGTGTTTGCC...AATAGTTGTGTTTGCCCAAGCCTTTCTCGGCATCATCTTGTATTCCTTATCAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| CDS-3UTR GCA 90 bp | TGGGCAAACACAACTATTGGAACCAGGTTACCAGTACATTTAAACACTATTAGAGTCAGATTCTTCCATTaGGCAACAAGTCCTTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: WANTTIGTRLPVHLNTIRVRFFH*ATSPFQ Trigger: CTGGAAAGGACTTGTTGCGCAATGGAAGAATCTGAC...TCTAATAGTGTTTAAATGTACTGGTAACCTGGTTCCAATAGTTGTGTTTGCCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| CDS-3UTR CCA 90 bp | TCTGATAAGGAATACAAGATGATGCCGAGAAAGGCTTGGGCAAACACAACTATTATTTTCTCAAATCTATaGGCATCACGCTGCTCTTTA | + |
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Preference number: 4 (lower is better) Translates to: SDKEYKMMPRKAWANTTIIFSNL*ASRCSL Trigger: TAAAGAGCAGCGTGATGCCCATAGATTTGAGAAAAT...AATAGTTGTGTTTGCCCAAGCCTTTCTCGGCATCATCTTGTATTCCTTATCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| CDS CCA 90 bp | GGGTTAGGGGTTCGTCCCGAGTTTGGGCCTCAGGCCCCCAAGGTCTaGAAACCCAAAGGTAACTTCACCCGCAAAGAGGTGAGGACCGCG | + |
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Preference number: 5 (lower is better) Translates to: GLGVRPEFGPQAPKV*KPKGNFTRKEVRTA Trigger: CGCGGTCCTCACCTCTTTGCGGGTGAAGTTACCTTTGGGTTTCCAGACCTTGGGGGCCTGAGGCCCAAACTCGGGACGAACCCCTAACCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000262850.7 ENST00000374941.9 |
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| CDS TCA 90 bp | CCCCCAAGGTCTGGAAACCCAAAGGTAACTTCACCCGCAAAGAGGTaGGGACCGCGAAGGCGGAGGTGGCAGAAAGAGCTGACCCATGCC | + |
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Preference number: 5 (lower is better) Translates to: PPRSGNPKVTSPAKR*GPRRRRWQKELTHA Trigger: GGCATGGGTCAGCTCTTTCTGCCACCTCCGCCTTCGCGGTCCTCACCTCTTTGCGGGTGAAGTTACCTTTGGGTTTCCAGACCTTGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000262850.7 ENST00000374941.9 |
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| CDS CCA 90 bp | TATGGCCCTCAGGCCTGCTCTATTCTTGCCTCCGCCTTTGTCCACTaGGGGGCCGCTTTCCCCACGGTTACCTTTATCTCTCGAACCTGG | + |
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Preference number: 5 (lower is better) Translates to: YGPQACSILASAFVH*GAAFPTVTFISRTW Trigger: CCAGGTTCGAGAGATAAAGGTAACCGTGGGGAAAGCGGCCCCCCAGTGGACAAAGGCGGAGGCAAGAATAGAGCAGGCCTGAGGGCCATA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000262850.7 ENST00000374941.9 |
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| CDS-3UTR CAA 90 bp | TGCCGAGAAAGGCTTGGGCAAACACAACTATTGGAACCAGGTTACCAGTACATTGGGTTCGTCCCGAGTTaGGGCCTCAGGCCCCCAAGG | + |
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Preference number: 5 (lower is better) Translates to: CRERLGQTQLLEPGYQYIGFVPS*GLRPPR Trigger: CCTTGGGGGCCTGAGGCCCAAACTCGGGACGAACCC...AATGTACTGGTAACCTGGTTCCAATAGTTGTGTTTGCCCAAGCCTTTCTCGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| CDS CCA 90 bp | CGGTTACCTTTATCTCTCGAACCTGGCCTCAAGGCACGGCCGAGCTaGCTAGCTTTAAGGCCAAGTGATTCCGTGGTACAAAGTAAGAGT | + |
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Preference number: 5 (lower is better) Translates to: RLPLSLEPGLKARPS*LALRPSDSVVQSKS Trigger: ACTCTTACTTTGTACCACGGAATCACTTGGCCTTAAAGCTAGCCAGCTCGGCCGTGCCTTGAGGCCAGGTTCGAGAGATAAAGGTAACCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000262850.7 ENST00000374941.9 |
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| CDS-3UTR CAA 90 bp | GATAAGGAATACAAGATGATGCCGAGAAAGGCTTGGGCAAACACAACTATTGGAAAAGAGGCAGCCAGCTaGCTGCAGCTCAGCTTGAAC | + |
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Preference number: 5 (lower is better) Translates to: DKEYKMMPRKAWANTTIGKEAAS*LQLSLN Trigger: GTTCAAGCTGAGCTGCAGCAAGCTGGCTGCCTCTTT...TCCAATAGTTGTGTTTGCCCAAGCCTTTCTCGGCATCATCTTGTATTCCTTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| CDS-3UTR CAA 90 bp | GATGCCGAGAAAGGCTTGGGCAAACACAACTATTGGAACCAGGTTACCAGTACAGGGCAAACACAACTATaGGAACCAGGTTACCAGTAC | + |
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Preference number: 5 (lower is better) Translates to: DAEKGLGKHNYWNQVTSTGQTQL*EPGYQY Trigger: GTACTGGTAACCTGGTTCCAATAGTTGTGTTTGCCC...TGTACTGGTAACCTGGTTCCAATAGTTGTGTTTGCCCAAGCCTTTCTCGGCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| CDS-3UTR CAA 90 bp | TGCCGAGAAAGGCTTGGGCAAACACAACTATTGGAACCAGGTTACCAGTACATTGATGCCGAGAAAGGCTaGGGCAAACACAACTATTGG | + |
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Preference number: 5 (lower is better) Translates to: CRERLGQTQLLEPGYQYIDAEKG*GKHNYW Trigger: CCAATAGTTGTGTTTGCCCAAGCCTTTCTCGGCATC...AATGTACTGGTAACCTGGTTCCAATAGTTGTGTTTGCCCAAGCCTTTCTCGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| CDS-3UTR CAA 90 bp | TCTGATAAGGAATACAAGATGATGCCGAGAAAGGCTTGGGCAAACACAACTATTAGGCCTGCTCTATTCTaGCCTCCGCCTTTGTCCACT | + |
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Preference number: 5 (lower is better) Translates to: SDKEYKMMPRKAWANTTIRPALF*PPPLST Trigger: AGTGGACAAAGGCGGAGGCAAGAATAGAGCAGGCCT...AATAGTTGTGTTTGCCCAAGCCTTTCTCGGCATCATCTTGTATTCCTTATCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| CDS-3UTR CAA 90 bp | AGAAAGGCTTGGGCAAACACAACTATTGGAACCAGGTTACCAGTACATTTAAACTTCCATGAAGGTGTCTaGCCCACCACAATCCCACAG | + |
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Preference number: 5 (lower is better) Translates to: RKAWANTTIGTRLPVHLNFHEGV*PTTIPQ Trigger: CTGTGGGATTGTGGTGGGCAAGACACCTTCATGGAA...GTTTAAATGTACTGGTAACCTGGTTCCAATAGTTGTGTTTGCCCAAGCCTTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| CDS-3UTR CAA 90 bp | TGCCGAGAAAGGCTTGGGCAAACACAACTATTGGAACCAGGTTACCAGTACATTACATTTCGGAAGATGTaGTCCCGTTGGCTAGTGAAA | + |
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Preference number: 5 (lower is better) Translates to: CRERLGQTQLLEPGYQYITFRKM*SRWLVK Trigger: TTTCACTAGCCAACGGGACAACATCTTCCGAAATGT...AATGTACTGGTAACCTGGTTCCAATAGTTGTGTTTGCCCAAGCCTTTCTCGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| CDS-3UTR CAA 90 bp | AAGGAATACAAGATGATGCCGAGAAAGGCTTGGGCAAACACAACTATTGGAACCAATGTTCTACATCAATaGTTGCGCCAAGGCGACGTG | + |
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Preference number: 5 (lower is better) Translates to: KEYKMMPRKAWANTTIGTNVLHQ*LRQGDV Trigger: CACGTCGCCTTGGCGCAACAATTGATGTAGAACATT...GGTTCCAATAGTTGTGTTTGCCCAAGCCTTTCTCGGCATCATCTTGTATTCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| CDS-3UTR CAA 90 bp | GATGCCGAGAAAGGCTTGGGCAAACACAACTATTGGAACCAGGTTACCAGTACAACCAAGCAAAATATTTaGGCATCTGGAGAATTCTGC | + |
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Preference number: 5 (lower is better) Translates to: DAEKGLGKHNYWNQVTSTTKQNI*ASGEFC Trigger: GCAGAATTCTCCAGATGCCAAAATATTTTGCTTGGT...TGTACTGGTAACCTGGTTCCAATAGTTGTGTTTGCCCAAGCCTTTCTCGGCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| CDS-3UTR CAA 90 bp | TCTGATAAGGAATACAAGATGATGCCGAGAAAGGCTTGGGCAAACACAACTATTCTGGCATTGCGGATGTaGATCAGAGTAGCTGCAGAA | + |
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Preference number: 5 (lower is better) Translates to: SDKEYKMMPRKAWANTTILALRM*IRVAAE Trigger: TTCTGCAGCTACTCTGATCAACATCCGCAATGCCAG...AATAGTTGTGTTTGCCCAAGCCTTTCTCGGCATCATCTTGTATTCCTTATCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| CDS TCA 90 bp | GATACAACTCCAATCAGCATTGAGACCACAACAGGTCAAAATGGATaGTGGCCAGTAAGTGAAACCTCTGCTATTACAAAGACCAGTATC | + |
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Preference number: 5 (lower is better) Translates to: DTTPISIETTTGQNG*WPVSETSAITKTSI Trigger: GATACTGGTCTTTGTAATAGCAGAGGTTTCACTTACTGGCCATCATCCATTTTGACCTGTTGTGGTCTCAATGCTGATTGGAGTTGTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000474757.1 |
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| CDS GCA 90 bp | CAGATTTTCTTTCTCCGTCGTTTTCTCAGAGTCAGATTCTTCCATTaGGCAACAAGTCCTTTCCAGTCCCTTCTAAATCTTCAGTACTCT | + |
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Preference number: 5 (lower is better) Translates to: QIFFLRRFLRVRFFH*ATSPFQSLLNLQYS Trigger: AGAGTACTGAAGATTTAGAAGGGACTGGAAAGGACTTGTTGCGCAATGGAAGAATCTGACTCTGAGAAAACGACGGAGAAAGAAAATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000262850.7 ENST00000374941.9 |
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| CDS-3UTR CAA 90 bp | TCTGATAAGGAATACAAGATGATGCCGAGAAAGGCTTGGGCAAACACAACTATTAGTCAGATTCTTCCATaGCGCAACAAGTCCTTTCCA | + |
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Preference number: 5 (lower is better) Translates to: SDKEYKMMPRKAWANTTISQILP*RNKSFP Trigger: TGGAAAGGACTTGTTGCGCAATGGAAGAATCTGACT...AATAGTTGTGTTTGCCCAAGCCTTTCTCGGCATCATCTTGTATTCCTTATCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| CDS-3UTR CAA 90 bp | TGGGCAAACACAACTATTGGAACCAGGTTACCAGTACATTTAAACACTATTAGAGTTCTACATCAATTGTaGCGCCAAGGCGACGTGTGT | + |
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Preference number: 5 (lower is better) Translates to: WANTTIGTRLPVHLNTIRVLHQL*RQGDVC Trigger: ACACACGTCGCCTTGGCGCAACAATTGATGTAGAAC...TCTAATAGTGTTTAAATGTACTGGTAACCTGGTTCCAATAGTTGTGTTTGCCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| CDS-3UTR CAA 90 bp | AGAAAGGCTTGGGCAAACACAACTATTGGAACCAGGTTACCAGTACATTTAAACGAAGATGTTGTCCCGTaGGCTAGTGAAATAATTTTC | + |
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Preference number: 5 (lower is better) Translates to: RKAWANTTIGTRLPVHLNEDVVP*ASEIIF Trigger: GAAAATTATTTCACTAGCCAACGGGACAACATCTTC...GTTTAAATGTACTGGTAACCTGGTTCCAATAGTTGTGTTTGCCCAAGCCTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374941.9 |
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| CDS GCA 72 bp | CAACTGCCTATTCTCATCGCCTATGGCCCTCAGGCCTaGTCTATTCTTGCCTCCGCCTTTGTCCACTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: QLPILIAYGPQA*SILASAFVHWG Trigger: CCCCCAGTGGACAAAGGCGGAGGCAAGAATAGAGCAGGCCTGAGGGCCATAGGCGATGAGAATAGGCAGTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000262850.7 ENST00000374941.9 |
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| CDS CCA 72 bp | GCCGCTTTCCCCACGGTTACCTTTATCTCTCGAACCTaGCCTCAAGGCACGGCCGAGCTGGCTAGCTTTAAG | + |
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Preference number: 6 (lower is better) Translates to: AAFPTVTFISRT*PQGTAELASFK Trigger: CTTAAAGCTAGCCAGCTCGGCCGTGCCTTGAGGCCAGGTTCGAGAGATAAAGGTAACCGTGGGGAAAGCGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000262850.7 ENST00000374941.9 |
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| CDS CCA 72 bp | CAGGCCTGCTCTATTCTTGCCTCCGCCTTTGTCCACTaGGGGGCCGCTTTCCCCACGGTTACCTTTATCTCT | + |
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Preference number: 6 (lower is better) Translates to: QACSILASAFVH*GAAFPTVTFIS Trigger: AGAGATAAAGGTAACCGTGGGGAAAGCGGCCCCCCAGTGGACAAAGGCGGAGGCAAGAATAGAGCAGGCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000262850.7 ENST00000374941.9 |
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| CDS CCA 72 bp | TTATCTCTCGAACCTGGCCTCAAGGCACGGCCGAGCTaGCTAGCTTTAAGGCCAAGTGATTCCGTGGTACAA | + |
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Preference number: 6 (lower is better) Translates to: LSLEPGLKARPS*LALRPSDSVVQ Trigger: TTGTACCACGGAATCACTTGGCCTTAAAGCTAGCCAGCTCGGCCGTGCCTTGAGGCCAGGTTCGAGAGATAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000262850.7 ENST00000374941.9 |
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| CDS CCA 72 bp | CTTTTTCACCCCTCAACTGCCTATTCTCATCGCCTATaGCCCTCAGGCCTGCTCTATTCTTGCCTCCGCCTT | + |
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Preference number: 6 (lower is better) Translates to: LFHPSTAYSHRL*PSGLLYSCLRL Trigger: AAGGCGGAGGCAAGAATAGAGCAGGCCTGAGGGCCATAGGCGATGAGAATAGGCAGTTGAGGGGTGAAAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000262850.7 ENST00000374941.9 |
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| CDS TCA 72 bp | CAAGTGATTCCGTGGTACAAAGTAAGAGTTGGAGAATaGCAGGAAAAGAGAGGTGGGTTAGGGGTTCGTCCC | + |
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Preference number: 6 (lower is better) Translates to: QVIPWYKVRVGE*QEKRGGLGVRP Trigger: GGGACGAACCCCTAACCCACCTCTCTTTTCCTGTCATTCTCCAACTCTTACTTTGTACCACGGAATCACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000262850.7 ENST00000374941.9 |
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| CDS CCA 72 bp | ATCCCAGATAGATGTTCGGAAACAAGAACATTCCAATaGGCGAGACAAACGCCTCAAATCTTCTTCTCGCTC | + |
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Preference number: 6 (lower is better) Translates to: IPDRCSETRTFQ*ARQTPQIFFSL Trigger: GAGCGAGAAGAAGATTTGAGGCGTTTGTCTCGCCCATTGGAATGTTCTTGTTTCCGAACATCTATCTGGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000262850.7 ENST00000374941.9 ENST00000414239.5 ENST00000474757.1 |
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| CDS TCA 72 bp | CACAGGTTCAATACCAGGTTTCCCAGAAATCGAACATaGGAATGTTCTACATCAATTGTTGCGCCAAGGCGA | + |
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Preference number: 6 (lower is better) Translates to: HRFNTRFPRNRT*ECSTSIVAPRR Trigger: TCGCCTTGGCGCAACAATTGATGTAGAACATTCTCATGTTCGATTTCTGGGAAACCTGGTATTGAACCTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000374941.9 ENST00000414239.5 ENST00000498762.1 |
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| CDS CAA 90 bp | CCAGATTTTCTTTCTCCGTCGTTTTCTCAGAGTCAGATTCTTCCATaGCGCAACAAGTCCTTTCCAGTCCCTTCTAAATCTTCAGTACTC | + |
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Preference number: 6 (lower is better) Translates to: PDFLSPSFSQSQILP*RNKSFPVPSKSSVL Trigger: GAGTACTGAAGATTTAGAAGGGACTGGAAAGGACTTGTTGCGCAATGGAAGAATCTGACTCTGAGAAAACGACGGAGAAAGAAAATCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000262850.7 ENST00000374941.9 |
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| CDS TCA 72 bp | CCAATCAGCATTGAGACCACAACAGGTCAAAATGGATaGTGGCCAGTAAGTGAAACCTCTGCTATTACAAAG | + |
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Preference number: 6 (lower is better) Translates to: PISIETTTGQNG*WPVSETSAITK Trigger: CTTTGTAATAGCAGAGGTTTCACTTACTGGCCATCATCCATTTTGACCTGTTGTGGTCTCAATGCTGATTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000474757.1 |
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| CDS CAA 90 bp | GGTTTCCCAGAAATCGAACATGAGAATGTTCTACATCAAATGTCTTaGTATTTCCAACAGAGTCTACGAGAGAGTAGGTGCTCAAACTGC | + |
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Preference number: 6 (lower is better) Translates to: GFPEIEHENVLHQMS*YFQQSLRESRCSNC Trigger: GCAGTTTGAGCACCTACTCTCTCGTAGACTCTGTTGGAAATACAAAGACATTTGATGTAGAACATTCTCATGTTCGATTTCTGGGAAACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262850.7 |
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| CDS TCA 72 bp | CACAGGTTCAATACCAGGTTTCCCAGAAATCGAACATaGGAATGTTCTACATCAAATGTCTTTGTATTTCCA | + |
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Preference number: 6 (lower is better) Translates to: HRFNTRFPRNRT*ECSTSNVFVFP Trigger: TGGAAATACAAAGACATTTGATGTAGAACATTCTCATGTTCGATTTCTGGGAAACCTGGTATTGAACCTGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262850.7 |
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