Pregenerated sensors for RRAGA (Homo sapiens)
Ensembl gene IDs: ENSG00000155876Ensembl transcript IDs: ENST00000380527.3
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATACCAACTTCTCAGAAAGGTCAGCTTCAAGCTCTACTGGGTAGCTaGGTAAATAGCGTCCAATGTTTAAAGACTGGGGAAGCGGGGAGA | + |
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Preference number: 1 (lower is better) Translates to: IPTSQKGQLQALLGS*VNSVQCLKTGEAGR Trigger: TCTCCCCGCTTCCCCAGTCTTTAAACATTGGACGCTATTTACTCAGCTACCCAGTAGAGCTTGAAGCTGACCTTTCTGAGAAGTTGGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| 3UTR-3UTR TCA 90 bp | AAAATAGTAACATTCCGTCTTTGCAATCTGATACGGAATACAGGAAGATACTGGGCTCTACTGGGTAGCTaGGTAAATAGCGTCCAATGT | + |
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Preference number: 2 (lower is better) Translates to: KIVTFRLCNLIRNTGRYWALLGS*VNSVQC Trigger: ACATTGGACGCTATTTACTCAGCTACCCAGTAGAGC...CCAGTATCTTCCTGTATTCCGTATCAGATTGCAAAGACGGAATGTTACTATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| 3UTR-3UTR CCA 90 bp | AAAATAGTAACATTCCGTCTTTGCAATCTGATACGGAATACAGGAAGATACTGGCCAATGTTTAAAGACTaGGGAAGCGGGGAGAAAGAT | + |
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Preference number: 2 (lower is better) Translates to: KIVTFRLCNLIRNTGRYWPMFKD*GSGEKD Trigger: ATCTTTCTCCCCGCTTCCCCAGTCTTTAAACATTGG...CCAGTATCTTCCTGTATTCCGTATCAGATTGCAAAGACGGAATGTTACTATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| 3UTR TCA 72 bp | TCTCAGAAAGGTCAGCTTCAAGCTCTACTGGGTAGCTaGGTAAATAGCGTCCAATGTTTAAAGACTGGGGAA | + |
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Preference number: 3 (lower is better) Translates to: SQKGQLQALLGS*VNSVQCLKTGE Trigger: TTCCCCAGTCTTTAAACATTGGACGCTATTTACTCAGCTACCCAGTAGAGCTTGAAGCTGACCTTTCTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS-3UTR TCA 90 bp | GAACCACCTACTTTAGTGTTACACCATACCAACTTCTCAGAAAGGTCAGCTTCAACCGCGGACTGGGCCTaGGGGCGCGGCCTACACGCA | + |
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Preference number: 4 (lower is better) Translates to: EPPTLVLHHTNFSERSASTADWA*GRGLHA Trigger: TGCGTGTAGGCCGCGCCCTCAGGCCCAGTCCGCGGT...TGAAGCTGACCTTTCTGAGAAGTTGGTATGGTGTAACACTAAAGTAGGTGGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS-3UTR CCA 90 bp | CCACCTACTTTAGTGTTACACCATACCAACTTCTCAGAAAGGTCAGCTTCAAGCAGGCCGCGGACGGGCTaGCTCTTACTCAGATGGGAG | + |
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Preference number: 4 (lower is better) Translates to: PPTLVLHHTNFSERSASSRPRTG*LLLRWE Trigger: CTCCCATCTGAGTAAGAGCCAGCCCGTCCGCGGCCT...GCTTGAAGCTGACCTTTCTGAGAAGTTGGTATGGTGTAACACTAAAGTAGGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS-3UTR CCA 90 bp | GAACCACCTACTTTAGTGTTACACCATACCAACTTCTCAGAAAGGTCAGCTTCAGTTCCACGTCAATGGTaGCCCCCAGGCGCCGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: EPPTLVLHHTNFSERSASVPRQW*PPGAGC Trigger: ACACCCGGCGCCTGGGGGCCACCATTGACGTGGAAC...TGAAGCTGACCTTTCTGAGAAGTTGGTATGGTGTAACACTAAAGTAGGTGGTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS-3UTR CCA 90 bp | AATGAGAACACACACGAACCACCTACTTTAGTGTTACACCATACCAACTTCTCAAGTGTTCCACGTCAATaGTGGCCCCCAGGCGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: NENTHEPPTLVLHHTNFSSVPRQ*WPPGAG Trigger: CCCGGCGCCTGGGGGCCACCATTGACGTGGAACACT...TGAGAAGTTGGTATGGTGTAACACTAAAGTAGGTGGTTCGTGTGTGTTCTCATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS-3UTR CCA 90 bp | AAAATAGTAACATTCCGTCTTTGCAATCTGATACGGAATACAGGAAGATACTGGGCCCGCGGCTGTCAGTaGCAACGGCTCGGGAGATAC | + |
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Preference number: 4 (lower is better) Translates to: KIVTFRLCNLIRNTGRYWARGCQ*QRLGRY Trigger: GTATCTCCCGAGCCGTTGCCACTGACAGCCGCGGGC...CCAGTATCTTCCTGTATTCCGTATCAGATTGCAAAGACGGAATGTTACTATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS-3UTR CCA 90 bp | GAACCACCTACTTTAGTGTTACACCATACCAACTTCTCAGAAAGGTCAGCTTCAGCGTCAGGAGAGTTCTaGAGGATGGCCTCCAGACAC | + |
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Preference number: 4 (lower is better) Translates to: EPPTLVLHHTNFSERSASASGEF*RMASRH Trigger: GTGTCTGGAGGCCATCCTCCAGAACTCTCCTGACGC...TGAAGCTGACCTTTCTGAGAAGTTGGTATGGTGTAACACTAAAGTAGGTGGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS-3UTR CCA 90 bp | ACGGAATACAGGAAGATACTGGTAAAGGCTTTGATGTGCATATCTATCATAACCTGGCTCTTACTCAGATaGGAGCGCCCGCGGCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: TEYRKILVKALMCISIITWLLLR*ERPRLS Trigger: TGACAGCCGCGGGCGCTCCCATCTGAGTAAGAGCCA...GGTTATGATAGATATGCACATCAAAGCCTTTACCAGTATCTTCCTGTATTCCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS-3UTR CCA 90 bp | CCACCTACTTTAGTGTTACACCATACCAACTTCTCAGAAAGGTCAGCTTCAAGCCCTAGGAATCGGACGTaGGAGTGTTCCACGTCAATG | + |
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Preference number: 4 (lower is better) Translates to: PPTLVLHHTNFSERSASSPRNRT*ECSTSM Trigger: CATTGACGTGGAACACTCCCACGTCCGATTCCTAGG...GCTTGAAGCTGACCTTTCTGAGAAGTTGGTATGGTGTAACACTAAAGTAGGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS-3UTR CCA 90 bp | GAACCACCTACTTTAGTGTTACACCATACCAACTTCTCAGAAAGGTCAGCTTCAGCTGGTAGACGATGCTaGACCAGGCTTTGTAGAGCG | + |
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Preference number: 4 (lower is better) Translates to: EPPTLVLHHTNFSERSASAGRRC*TRLCRA Trigger: CGCTCTACAAAGCCTGGTCCAGCATCGTCTACCAGC...TGAAGCTGACCTTTCTGAGAAGTTGGTATGGTGTAACACTAAAGTAGGTGGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS-3UTR CCA 90 bp | CCACCTACTTTAGTGTTACACCATACCAACTTCTCAGAAAGGTCAGCTTCAAGCATCTTCTCAAACCGGTaGACGTCGCGCTGCTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: PPTLVLHHTNFSERSASSIFSNR*TSRCSL Trigger: CAAAGAGCAGCGCGACGTCCACCGGTTTGAGAAGAT...GCTTGAAGCTGACCTTTCTGAGAAGTTGGTATGGTGTAACACTAAAGTAGGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS-3UTR TCA 90 bp | AATAGTAACATTCCGTCTTTGCAATCTGATACGGAATACAGGAAGATACTGGTATCCATGAAGGTGTCCTaGCCGCCACAGTCCCACAGG | + |
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Preference number: 4 (lower is better) Translates to: NSNIPSLQSDTEYRKILVSMKVS*PPQSHR Trigger: CCTGTGGGACTGTGGCGGTCAGGACACCTTCATGGA...TACCAGTATCTTCCTGTATTCCGTATCAGATTGCAAAGACGGAATGTTACTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS-3UTR TCA 90 bp | CCACCTACTTTAGTGTTACACCATACCAACTTCTCAGAAAGGTCAGCTTCAAGCTCGACGGATCTGACATaGCCACCATCACGTACGTAT | + |
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Preference number: 4 (lower is better) Translates to: PPTLVLHHTNFSERSASSSTDLT*PPSRTY Trigger: ATACGTACGTGATGGTGGTCATGTCAGATCCGTCGA...GCTTGAAGCTGACCTTTCTGAGAAGTTGGTATGGTGTAACACTAAAGTAGGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS-3UTR TCA 90 bp | AATGAGAACACACACGAACCACCTACTTTAGTGTTACACCATACCAACTTCTCAGGGCATTGCGAATGTTaGTCAGAGTGGCCGCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: NENTHEPPTLVLHHTNFSGHCEC*SEWPQK Trigger: CTTCTGCGGCCACTCTGATCAACATTCGCAATGCCC...TGAGAAGTTGGTATGGTGTAACACTAAAGTAGGTGGTTCGTGTGTGTTCTCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS-3UTR CCA 90 bp | AATGAGAACACACACGAACCACCTACTTTAGTGTTACACCATACCAACTTCTCAGAGAGTTCTGGAGGATaGCCTCCAGACACGACTGGT | + |
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Preference number: 4 (lower is better) Translates to: NENTHEPPTLVLHHTNFSESSGG*PPDTTG Trigger: ACCAGTCGTGTCTGGAGGCCATCCTCCAGAACTCTC...TGAGAAGTTGGTATGGTGTAACACTAAAGTAGGTGGTTCGTGTGTGTTCTCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS-3UTR CCA 90 bp | GAACCACCTACTTTAGTGTTACACCATACCAACTTCTCAGAAAGGTCAGCTTCACCAGGCAGAAGATTTTaGCGTCAGGAGAGTTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: EPPTLVLHHTNFSERSASPGRRF*RQESSG Trigger: TCCAGAACTCTCCTGACGCCAAAATCTTCTGCCTGG...TGAAGCTGACCTTTCTGAGAAGTTGGTATGGTGTAACACTAAAGTAGGTGGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS-3UTR GCA 90 bp | AATAGTAACATTCCGTCTTTGCAATCTGATACGGAATACAGGAAGATACTGGTAAGATTATCGACCTCATaGTGGTCTTCCCCGACCCGC | + |
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Preference number: 4 (lower is better) Translates to: NSNIPSLQSDTEYRKILVRLSTS*WSSPTR Trigger: GCGGGTCGGGGAAGACCAGCATGAGGTCGATAATCT...TACCAGTATCTTCCTGTATTCCGTATCAGATTGCAAAGACGGAATGTTACTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS-3UTR CCA 90 bp | CCACCTACTTTAGTGTTACACCATACCAACTTCTCAGAAAGGTCAGCTTCAAGCTCGGCCTCAATGATTTaGGCAAAATTCCTGAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: PPTLVLHHTNFSERSASSSASMI*AKFLRF Trigger: GAACCTCAGGAATTTTGCCCAAATCATTGAGGCCGA...GCTTGAAGCTGACCTTTCTGAGAAGTTGGTATGGTGTAACACTAAAGTAGGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS-3UTR TCA 90 bp | AAAATAGTAACATTCCGTCTTTGCAATCTGATACGGAATACAGGAAGATACTGGAGGGATCGACGGATCTaGCATGACCACCATCACGTA | + |
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Preference number: 4 (lower is better) Translates to: KIVTFRLCNLIRNTGRYWRDRRI*HDHHHV Trigger: TACGTGATGGTGGTCATGTCAGATCCGTCGATCCCT...CCAGTATCTTCCTGTATTCCGTATCAGATTGCAAAGACGGAATGTTACTATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS-3UTR CCA 90 bp | ACCACCTACTTTAGTGTTACACCATACCAACTTCTCAGAAAGGTCAGCTTCAAGCCAATGTTTAAAGACTaGGGAAGCGGGGAGAAAGAT | + |
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Preference number: 4 (lower is better) Translates to: TTYFSVTPYQLLRKVSFKPMFKD*GSGEKD Trigger: ATCTTTCTCCCCGCTTCCCCAGTCTTTAAACATTGG...CTTGAAGCTGACCTTTCTGAGAAGTTGGTATGGTGTAACACTAAAGTAGGTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS-3UTR CCA 90 bp | TCTGATACGGAATACAGGAAGATACTGGTAAAGGCTTTGATGTGCATATCTATCCTAACTTCCATGCTCTaGAAGGAAGCGGCCAATTTA | + |
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Preference number: 4 (lower is better) Translates to: SDTEYRKILVKALMCISILTSML*KEAANL Trigger: TAAATTGGCCGCTTCCTTCCAGAGCATGGAAGTTAG...GATAGATATGCACATCAAAGCCTTTACCAGTATCTTCCTGTATTCCGTATCAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS-3UTR GCA 90 bp | GAACCACCTACTTTAGTGTTACACCATACCAACTTCTCAGAAAGGTCAGCTTCAGTAACATTCCGTCTTTaGAATCTGATACGGAATACA | + |
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Preference number: 4 (lower is better) Translates to: EPPTLVLHHTNFSERSASVTFRL*NLIRNT Trigger: TGTATTCCGTATCAGATTGCAAAGACGGAATGTTAC...TGAAGCTGACCTTTCTGAGAAGTTGGTATGGTGTAACACTAAAGTAGGTGGTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS-3UTR CCA 90 bp | AATAGTAACATTCCGTCTTTGCAATCTGATACGGAATACAGGAAGATACTGGTACGCGAGCAATGTAATTaGCGAAGATTATCGACCTCA | + |
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Preference number: 4 (lower is better) Translates to: NSNIPSLQSDTEYRKILVREQCN*RRLSTS Trigger: TGAGGTCGATAATCTTCGCCAATTACATTGCTCGCG...TACCAGTATCTTCCTGTATTCCGTATCAGATTGCAAAGACGGAATGTTACTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS-3UTR TCA 90 bp | TACGGAATACAGGAAGATACTGGTAAAGGCTTTGATGTGCATATCTATCATAACCATCACGTACGTATTTaGGGTGAAGATGTCGATGAA | + |
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Preference number: 4 (lower is better) Translates to: YGIQEDTGKGFDVHIYHNHHVRI*GEDVDE Trigger: TTCATCGACATCTTCACCTCAAATACGTACGTGATG...GTTATGATAGATATGCACATCAAAGCCTTTACCAGTATCTTCCTGTATTCCGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS-3UTR TCA 90 bp | AATAGTAACATTCCGTCTTTGCAATCTGATACGGAATACAGGAAGATACTGGTATCCGTCTTTGCAATCTaGTACGGAATACAGGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: NSNIPSLQSDTEYRKILVSVFAI*YGIQED Trigger: ATCTTCCTGTATTCCGTATCAGATTGCAAAGACGGA...TACCAGTATCTTCCTGTATTCCGTATCAGATTGCAAAGACGGAATGTTACTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS-3UTR GCA 90 bp | AATAGTAACATTCCGTCTTTGCAATCTGATACGGAATACAGGAAGATACTGGTAGTAAAGGCTTTGATGTaGATATCTATCATAACCAGG | + |
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Preference number: 4 (lower is better) Translates to: NSNIPSLQSDTEYRKILVVKALM*ISIITR Trigger: CCTGGTTATGATAGATATGCACATCAAAGCCTTTAC...TACCAGTATCTTCCTGTATTCCGTATCAGATTGCAAAGACGGAATGTTACTATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS CCA 90 bp | GCCGGGGACTCGCAGGCCGCGCCTCGCTCCGCTCCGCCGCGCAGCTaGGCAGGCAGGAGAGTCGAGAGCGCGAACCCGGGGCTGGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: AGDSQAAPRSAPPRS*AGRRVESANPGLER Trigger: CCTCTCCAGCCCCGGGTTCGCGCTCTCGACTCTCCTGCCTGCCCAGCTGCGCGGCGGAGCGGAGCGAGGCGCGGCCTGCGAGTCCCCGGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS CCA 90 bp | CGCGCAGCTGGGCAGGCAGGAGAGTCGAGAGCGCGAACCCGGGGCTaGAGAGGCCGCGGACGGGCTGGCTCTTACTCAGATGGGAGCGCC | + |
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Preference number: 5 (lower is better) Translates to: RAAGQAGESRARTRG*RGRGRAGSYSDGSA Trigger: GGCGCTCCCATCTGAGTAAGAGCCAGCCCGTCCGCGGCCTCTCCAGCCCCGGGTTCGCGCTCTCGACTCTCCTGCCTGCCCAGCTGCGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS CCA 90 bp | GCACCAGGTTCCCTAGGAATCGGACGTGGGAGTGTTCCACGTCAATaGTGGCCCCCAGGCGCCGGGTGTCGCGAGCAATGTAATTGGCGA | + |
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Preference number: 5 (lower is better) Translates to: APGSLGIGRGSVPRQ*WPPGAGCREQCNWR Trigger: TCGCCAATTACATTGCTCGCGACACCCGGCGCCTGGGGGCCACCATTGACGTGGAACACTCCCACGTCCGATTCCTAGGGAACCTGGTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS CCA 90 bp | CCAGGTTCCCTAGGAATCGGACGTGGGAGTGTTCCACGTCAATGGTaGCCCCCAGGCGCCGGGTGTCGCGAGCAATGTAATTGGCGAAGA | + |
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Preference number: 5 (lower is better) Translates to: PGSLGIGRGSVPRQW*PPGAGCREQCNWRR Trigger: TCTTCGCCAATTACATTGCTCGCGACACCCGGCGCCTGGGGGCCACCATTGACGTGGAACACTCCCACGTCCGATTCCTAGGGAACCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS GCA 90 bp | GCCGGGTGTCGCGAGCAATGTAATTGGCGAAGATTATCGACCTCATaGTGGTCTTCCCCGACCCGCTCTTCCCCATCAGCAGCACCTTTT | + |
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Preference number: 5 (lower is better) Translates to: AGCREQCNWRRLSTS*WSSPTRSSPSAAPF Trigger: AAAAGGTGCTGCTGATGGGGAAGAGCGGGTCGGGGAAGACCAGCATGAGGTCGATAATCTTCGCCAATTACATTGCTCGCGACACCCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS-3UTR CAA 90 bp | CCACCTACTTTAGTGTTACACCATACCAACTTCTCAGAAAGGTCAGCTTCAAGCCGGGCATTGCGAATGTaGATCAGAGTGGCCGCAGAA | + |
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Preference number: 5 (lower is better) Translates to: PPTLVLHHTNFSERSASSRALRM*IRVAAE Trigger: TTCTGCGGCCACTCTGATCAACATTCGCAATGCCCG...GCTTGAAGCTGACCTTTCTGAGAAGTTGGTATGGTGTAACACTAAAGTAGGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS-3UTR CAA 90 bp | TGTTACACCATACCAACTTCTCAGAAAGGTCAGCTTCAAGCTCTACTGGGTAGCACGTTACGGAAGATATaGTCTCGCTGGCTGGTGAAG | + |
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Preference number: 5 (lower is better) Translates to: CYTIPTSQKGQLQALLGSTLRKI*SRWLVK Trigger: CTTCACCAGCCAGCGAGACAATATCTTCCGTAACGT...GCTACCCAGTAGAGCTTGAAGCTGACCTTTCTGAGAAGTTGGTATGGTGTAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS-3UTR CAA 90 bp | ACGGAATACAGGAAGATACTGGTAAAGGCTTTGATGTGCATATCTATCATAACCACCAGGCAGAAGATTTaGGCGTCAGGAGAGTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: TEYRKILVKALMCISIITTRQKI*ASGEFW Trigger: CCAGAACTCTCCTGACGCCAAAATCTTCTGCCTGGT...GGTTATGATAGATATGCACATCAAAGCCTTTACCAGTATCTTCCTGTATTCCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS-3UTR CAA 90 bp | GAACCACCTACTTTAGTGTTACACCATACCAACTTCTCAGAAAGGTCAGCTTCAATCGGCCTCAATGATTaGGGCAAAATTCCTGAGGTT | + |
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Preference number: 5 (lower is better) Translates to: EPPTLVLHHTNFSERSASIGLND*GKIPEV Trigger: AACCTCAGGAATTTTGCCCAAATCATTGAGGCCGAT...TGAAGCTGACCTTTCTGAGAAGTTGGTATGGTGTAACACTAAAGTAGGTGGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS-3UTR CAA 90 bp | CCACCTACTTTAGTGTTACACCATACCAACTTCTCAGAAAGGTCAGCTTCAAGCAGTAACATTCCGTCTTaGCAATCTGATACGGAATAC | + |
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Preference number: 5 (lower is better) Translates to: PPTLVLHHTNFSERSASSSNIPS*QSDTEY Trigger: GTATTCCGTATCAGATTGCAAAGACGGAATGTTACT...GCTTGAAGCTGACCTTTCTGAGAAGTTGGTATGGTGTAACACTAAAGTAGGTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS TCA 72 bp | TTTGGCATCACCCGCCGGGGCACCGCGGACTGGGCCTaGGGGCGCGGCCTACACGCAGCGCCGAGGGAGGGG | + |
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Preference number: 6 (lower is better) Translates to: FGITRRGTADWA*GRGLHAAPREG Trigger: CCCCTCCCTCGGCGCTGCGTGTAGGCCGCGCCCTCAGGCCCAGTCCGCGGTGCCCCGGCGGGTGATGCCAAA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS CCA 72 bp | CTGGAGAGGCCGCGGACGGGCTGGCTCTTACTCAGATaGGAGCGCCCGCGGCTGTCAGTGGCAACGGCTCGG | + |
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Preference number: 6 (lower is better) Translates to: LERPRTGWLLLR*ERPRLSVATAR Trigger: CCGAGCCGTTGCCACTGACAGCCGCGGGCGCTCCCATCTGAGTAAGAGCCAGCCCGTCCGCGGCCTCTCCAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS CCA 72 bp | GGGCAGGCAGGAGAGTCGAGAGCGCGAACCCGGGGCTaGAGAGGCCGCGGACGGGCTGGCTCTTACTCAGAT | + |
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Preference number: 6 (lower is better) Translates to: GQAGESRARTRG*RGRGRAGSYSD Trigger: ATCTGAGTAAGAGCCAGCCCGTCCGCGGCCTCTCCAGCCCCGGGTTCGCGCTCTCGACTCTCCTGCCTGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS CCA 72 bp | TCCCTAGGAATCGGACGTGGGAGTGTTCCACGTCAATaGTGGCCCCCAGGCGCCGGGTGTCGCGAGCAATGT | + |
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Preference number: 6 (lower is better) Translates to: SLGIGRGSVPRQ*WPPGAGCREQC Trigger: ACATTGCTCGCGACACCCGGCGCCTGGGGGCCACCATTGACGTGGAACACTCCCACGTCCGATTCCTAGGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS CCA 72 bp | CTAGGAATCGGACGTGGGAGTGTTCCACGTCAATGGTaGCCCCCAGGCGCCGGGTGTCGCGAGCAATGTAAT | + |
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Preference number: 6 (lower is better) Translates to: LGIGRGSVPRQW*PPGAGCREQCN Trigger: ATTACATTGCTCGCGACACCCGGCGCCTGGGGGCCACCATTGACGTGGAACACTCCCACGTCCGATTCCTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS GCA 72 bp | CGCGAGCAATGTAATTGGCGAAGATTATCGACCTCATaGTGGTCTTCCCCGACCCGCTCTTCCCCATCAGCA | + |
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Preference number: 6 (lower is better) Translates to: REQCNWRRLSTS*WSSPTRSSPSA Trigger: TGCTGATGGGGAAGAGCGGGTCGGGGAAGACCAGCATGAGGTCGATAATCTTCGCCAATTACATTGCTCGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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| CDS CCA 72 bp | GGCAGAAGATTTTGGCGTCAGGAGAGTTCTGGAGGATaGCCTCCAGACACGACTGGTAATAATGCATGTCCT | + |
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Preference number: 6 (lower is better) Translates to: GRRFWRQESSGG*PPDTTGNNACP Trigger: AGGACATGCATTATTACCAGTCGTGTCTGGAGGCCATCCTCCAGAACTCTCCTGACGCCAAAATCTTCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380527.3 |
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