RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RPUSD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000007376

Ensembl transcript IDs: ENST00000007264.7, ENST00000561734.5, ENST00000562070.1, ENST00000563560.1, ENST00000565377.1, ENST00000565503.5, ENST00000565809.5, ENST00000567114.5, ENST00000567283.5, ENST00000569601.5

Found 606 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGGCCCAGGGCACTGCAGTGCACGCGCAGCTGGTGTGTCCGGCCTaGGGGATGAGGGCGGTGCCGGATCAAGCTGGGAGCGGGGCCGAT +
Preference number: 1 (lower is better)
Translates to: VAQGTAVHAQLVCPA*GMRAVPDQAGSGAD
Trigger: ATCGGCCCCGCTCCCAGCTTGATCCGGCACCGCCCTCATCCCGCAGGCCGGACACACCAGCTGCGCGTGCACTGCAGTGCCCTGGGCCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562070.1
3UTR TCA 90 bp AGGGCACTGCAGTGCACGCGCAGCTGGTGTGTCCGGCCTGCGGGATaGGGGCGGTGCCGGATCAAGCTGGGAGCGGGGCCGATCCACACC +
Preference number: 1 (lower is better)
Translates to: RALQCTRSWCVRPAG*GRCRIKLGAGPIHT
Trigger: GGTGTGGATCGGCCCCGCTCCCAGCTTGATCCGGCACCGCCCTCATCCCGCAGGCCGGACACACCAGCTGCGCGTGCACTGCAGTGCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562070.1
3UTR GCA 90 bp CTTCTCCGTAGGTCAGGTCGCCCACCACGGGGTGGCCCAGGGCACTaGAGTGCACGCGCAGCTGGTGTGTCCGGCCTGCGGGATGAGGGC +
Preference number: 1 (lower is better)
Translates to: LLRRSGRPPRGGPGH*SARAAGVSGLRDEG
Trigger: GCCCTCATCCCGCAGGCCGGACACACCAGCTGCGCGTGCACTGCAGTGCCCTGGGCCACCCCGTGGTGGGCGACCTGACCTACGGAGAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562070.1
3UTR CCA 90 bp GCTGTTCCAGGAGGAGGGAGGGGCCTCGGTTTCTCCCGGGGCATGTaGGCAGGAAGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCG +
Preference number: 1 (lower is better)
Translates to: AVPGGGRGLGFSRGM*AGRPSGSRISPTAA
Trigger: CGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCTTCCTGCCCACATGCCCCGGGAGAAACCGAGGCCCCTCCCTCCTCCTGGAACAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR CCA 90 bp GCTGGTGTGTCCGGCCTGCGGGATGAGGGCGGTGCCGGATCAAGCTaGGAGCGGGGCCGATCCACACCTATCTCCCTGACCAGGACCCAC +
Preference number: 1 (lower is better)
Translates to: AGVSGLRDEGGAGSS*ERGRSTPISLTRTH
Trigger: GTGGGTCCTGGTCAGGGAGATAGGTGTGGATCGGCCCCGCTCCCAGCTTGATCCGGCACCGCCCTCATCCCGCAGGCCGGACACACCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562070.1
3UTR CCA 90 bp GCCCGTAAGGCCTGCACGAGCTGGTCCAGCGACTGCAGCAGTGTGTaGGGGCTCCAGCAGGCATCCAGGGAGGGCAGGAAGGGGTCAGGC +
Preference number: 1 (lower is better)
Translates to: ARKACTSWSSDCSSV*GLQQASREGRKGSG
Trigger: GCCTGACCCCTTCCTGCCCTCCCTGGATGCCTGCTGGAGCCCCCACACACTGCTGCAGTCGCTGGACCAGCTCGTGCAGGCCTTACGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565809.5
3UTR CCA 90 bp GGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCCAAGCTaGGGTCCCGGAGGCAGAGTGACAATGCATGGCTGTGTGGGAGCC +
Preference number: 1 (lower is better)
Translates to: GGQRRWDLADPQLPS*GPGGRVTMHGCVGA
Trigger: GGCTCCCACACAGCCATGCATTGTCACTCTGCCTCCGGGACCCCAGCTTGGGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR CCA 90 bp CCCAAGAGACTGCAGCAGGTTGGTGCTCACAGTGGATCTGAGGGATaGGCGTGCGTGGCAGGGCCTTGGCCATGGCCCCTGACCAACCCC +
Preference number: 1 (lower is better)
Translates to: PKRLQQVGAHSGSEG*ACVAGPWPWPLTNP
Trigger: GGGGTTGGTCAGGGGCCATGGCCAAGGCCCTGCCACGCACGCCCATCCCTCAGATCCACTGTGAGCACCAACCTGCTGCAGTCTCTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR TCA 90 bp CACACTGAGCTCAGAATCCGGGCAGAGAGGGAACCACTGGTACAGTaGGGCCAAGGCACACGCAGCCGGGCCTGCAGACTCGAGCCCAGC +
Preference number: 1 (lower is better)
Translates to: HTELRIRAEREPLVQ*GQGTRSRACRLEPS
Trigger: GCTGGGCTCGAGTCTGCAGGCCCGGCTGCGTGTGCCTTGGCCTCACTGTACCAGTGGTTCCCTCTCTGCCCGGATTCTGAGCTCAGTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR TCA 90 bp GTGCCGGATCAAGCTGGGAGCGGGGCCGATCCACACCTATCTCCCTaGCCAGGACCCACCTCCCGTCATGACCCCGCTGCAGTCTTGAAG +
Preference number: 1 (lower is better)
Translates to: VPDQAGSGADPHLSP*PGPTSRHDPAAVLK
Trigger: CTTCAAGACTGCAGCGGGGTCATGACGGGAGGTGGGTCCTGGTCAGGGAGATAGGTGTGGATCGGCCCCGCTCCCAGCTTGATCCGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562070.1
3UTR GCA 90 bp GGCGTGCGTGGCAGGGCCTTGGCCATGGCCCCTGACCAACCCCTGTaGACCAAACACCACACTGAGCTCAGAATCCGGGCAGAGAGGGAA +
Preference number: 1 (lower is better)
Translates to: GVRGRALAMAPDQPL*TKHHTELRIRAERE
Trigger: TTCCCTCTCTGCCCGGATTCTGAGCTCAGTGTGGTGTTTGGTGCACAGGGGTTGGTCAGGGGCCATGGCCAAGGCCCTGCCACGCACGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR TCA 90 bp CGGTGTCCGTGGGGATGCGCAGGTAGAAAGCGTGCAGCATCATTCTaGACGGCCGGTCCTCCCGGCCCGAGACTTCTCCGTAGGTCAGGT +
Preference number: 1 (lower is better)
Translates to: RCPWGCAGRKRAASF*TAGPPGPRLLRRSG
Trigger: ACCTGACCTACGGAGAAGTCTCGGGCCGGGAGGACCGGCCGTTCAGAATGATGCTGCACGCTTTCTACCTGCGCATCCCCACGGACACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562070.1
ENST00000565809.5
ENST00000567283.5
3UTR CCA 90 bp CACAGTGGATCTGAGGGATGGGCGTGCGTGGCAGGGCCTTGGCCATaGCCCCTGACCAACCCCTGTGCACCAAACACCACACTGAGCTCA +
Preference number: 1 (lower is better)
Translates to: HSGSEGWACVAGPWP*PLTNPCAPNTTLSS
Trigger: TGAGCTCAGTGTGGTGTTTGGTGCACAGGGGTTGGTCAGGGGCCATGGCCAAGGCCCTGCCACGCACGCCCATCCCTCAGATCCACTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR CCA 90 bp TATTTGGAGTCCCTGGAGCCCTGCTGTAGCCAGGAGCCCAGGTTGTaGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTC +
Preference number: 1 (lower is better)
Translates to: YLESLEPCCSQEPRL*HGGQRRWDLADPQL
Trigger: GAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACCTGGGCTCCTGGCTACAGCAGGGCTCCAGGGACTCCAAATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
3UTR CCA 90 bp GGCTTTGGGTTCTCACAACCCTGCGAGCCCTCGATGCACATGGTGTaGGCCCGGCCCTCCGTGCTGTTCCTGCCAATGGCATGGCTGATG +
Preference number: 1 (lower is better)
Translates to: GFGFSQPCEPSMHMV*ARPSVLFLPMAWLM
Trigger: CATCAGCCATGCCATTGGCAGGAACAGCACGGAGGGCCGGGCCCACACCATGTGCATCGAGGGCTCGCAGGGTTGTGAGAACCCAAAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565503.5
3UTR GCA 90 bp CCGGCCCGTGAGCGGCTTCAGCAGCACTTTGGAGACAGGATCGCCTaGGTACAGCCCGTGTTCCAGAACCACGAGATCTGTGAGGCTTGG +
Preference number: 1 (lower is better)
Translates to: PARERLQQHFGDRIA*VQPVFQNHEICEAW
Trigger: CCAAGCCTCACAGATCTCGTGGTTCTGGAACACGGGCTGTACGCAGGCGATCCTGTCTCCAAAGTGCTGCTGAAGCCGCTCACGGGCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567283.5
3UTR TCA 90 bp CAGGATCGCCTGCGTACAGCCCGTGTTCCAGAACCACGAGATCTGTaGGGCTTGGCTTTGGGTTCTCACAACCCTGCGAGCCCTCGATGC +
Preference number: 1 (lower is better)
Translates to: QDRLRTARVPEPRDL*GLALGSHNPASPRC
Trigger: GCATCGAGGGCTCGCAGGGTTGTGAGAACCCAAAGCCAAGCCTCACAGATCTCGTGGTTCTGGAACACGGGCTGTACGCAGGCGATCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565503.5
3UTR-3UTR GCA 90 bp CCTCCCGGCCCGAGACTTCTCCGTAGGTCAGGTCGCCCACCACGGGGTGGCCCACTGGTGTGTCCGGCCTaGGGGATGAGGGCGGTGCCG +
Preference number: 2 (lower is better)
Translates to: PPGPRLLRRSGRPPRGGPLVCPA*GMRAVP
Trigger: CGGCACCGCCCTCATCCCGCAGGCCGGACACACCAG...TGGGCCACCCCGTGGTGGGCGACCTGACCTACGGAGAAGTCTCGGGCCGGGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562070.1
3UTR-3UTR CCA 90 bp GAAGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTGCGGTCGTCACCTGCCTTCCTCGCAGGCCTaGCCGGGGCAACCCAGTGGG +
Preference number: 2 (lower is better)
Translates to: EGPRDPASVPRPRCGRHLPSSQA*PGQPSG
Trigger: CCCACTGGGTTGCCCCGGCCAGGCCTGCGAGGAAGG...CAGGTGACGACCGCACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCTTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR CCA 90 bp CTCCCGGCCCGAGACTTCTCCGTAGGTCAGGTCGCCCACCACGGGGTGGCCCAGCCTTCCTCGCAGGCCTaGCCGGGGCAACCCAGTGGG +
Preference number: 2 (lower is better)
Translates to: LPARDFSVGQVAHHGVAQPSSQA*PGQPSG
Trigger: CCCACTGGGTTGCCCCGGCCAGGCCTGCGAGGAAGG...CTGGGCCACCCCGTGGTGGGCGACCTGACCTACGGAGAAGTCTCGGGCCGGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565809.5
3UTR-3UTR TCA 90 bp CAGCTGTCCGGTTCCAGCGTCCACTCCGACAGCCACTGCAGGCAGGGGCCCCGCTGCGGTCGTCACCTGTaGTCACGGCTGCCTGGCGCC +
Preference number: 2 (lower is better)
Translates to: QLSGSSVHSDSHCRQGPRCGRHL*SRLPGA
Trigger: GGCGCCAGGCAGCCGTGATCACAGGTGACGACCGCA...GCGGGGCCCCTGCCTGCAGTGGCTGTCGGAGTGGACGCTGGAACCGGACAGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565809.5
3UTR-3UTR CCA 90 bp GCAGACGCTCGCTCGCCCATCTCCCTAGAGTCCCGCTGTGCAGCTGACACCCCCGTGATCACGGCTGCCTaGCGCCCCCTGCCGGCCCCA +
Preference number: 2 (lower is better)
Translates to: ADARSPISLESRCAADTPVITAA*RPLPAP
Trigger: TGGGGCCGGCAGGGGGCGCCAGGCAGCCGTGATCAC...GGGGGTGTCAGCTGCACAGCGGGACTCTAGGGAGATGGGCGAGCGAGCGTCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR TCA 90 bp GCACACGCAGCCGGGCCTGCAGACTCGAGCCCAGCAGGGACCATTAGGTCTCGGAGGCCCCAGAGCCAGTaGGCAGACGCTCGCTCGCCC +
Preference number: 2 (lower is better)
Translates to: AHAAGPADSSPAGTIRSRRPQSQ*ADARSP
Trigger: GGGCGAGCGAGCGTCTGCTCACTGGCTCTGGGGCCT...CCGAGACCTAATGGTCCCTGCTGGGCTCGAGTCTGCAGGCCCGGCTGCGTGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR TCA 90 bp GAAGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTGCGGTCGTCACCTGGCAACCCAGTGGGCCTaGTGCTGCCTGGCACCTCGA +
Preference number: 2 (lower is better)
Translates to: EGPRDPASVPRPRCGRHLATQWA*CCLAPR
Trigger: TCGAGGTGCCAGGCAGCATCAGGCCCACTGGGTTGC...CAGGTGACGACCGCACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCTTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR TCA 90 bp GGGCATGTGGGCAGGAAGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTGCAACCCAGTGGGCCTaGTGCTGCCTGGCACCTCGA +
Preference number: 2 (lower is better)
Translates to: GHVGRKALGIPHQSHGRGATQWA*CCLAPR
Trigger: TCGAGGTGCCAGGCAGCATCAGGCCCACTGGGTTGC...ACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCTTCCTGCCCACATGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR GCA 90 bp GCTGTTCCAGGAGGAGGGAGGGGCCTCGGTTTCTCCCGGGGCATGTGGGCAGGAACCTGTGATCACGGCTaGCTGGCGCCCCCTGCCGGC +
Preference number: 2 (lower is better)
Translates to: AVPGGGRGLGFSRGMWAGTCDHG*LAPPAG
Trigger: GCCGGCAGGGGGCGCCAGGCAGCCGTGATCACAGGT...TCCTGCCCACATGCCCCGGGAGAAACCGAGGCCCCTCCCTCCTCCTGGAACAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR TCA 90 bp CCAAGGCACACGCAGCCGGGCCTGCAGACTCGAGCCCAGCAGGGACCATTAGGTAGGCCCCAGAGCCAGTaGGCAGACGCTCGCTCGCCC +
Preference number: 2 (lower is better)
Translates to: PRHTQPGLQTRAQQGPLGRPQSQ*ADARSP
Trigger: GGGCGAGCGAGCGTCTGCTCACTGGCTCTGGGGCCT...ACCTAATGGTCCCTGCTGGGCTCGAGTCTGCAGGCCCGGCTGCGTGTGCCTTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR TCA 90 bp GCTGTTCCAGGAGGAGGGAGGGGCCTCGGTTTCTCCCGGGGCATGTGGGCAGGATGCGGTCGTCACCTGTaGTCACGGCTGCCTGGCGCC +
Preference number: 2 (lower is better)
Translates to: AVPGGGRGLGFSRGMWAGCGRHL*SRLPGA
Trigger: GGCGCCAGGCAGCCGTGATCACAGGTGACGACCGCA...TCCTGCCCACATGCCCCGGGAGAAACCGAGGCCCCTCCCTCCTCCTGGAACAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR TCA 90 bp TCCGGTTCCAGCGTCCACTCCGACAGCCACTGCAGGCAGGGGCCCCGCTGTGCCCCCTGGGGTGACGCTTaGGAGCCGGAAGCTGTTCCA +
Preference number: 2 (lower is better)
Translates to: SGSSVHSDSHCRQGPRCAPWGDA*EPEAVP
Trigger: TGGAACAGCTTCCGGCTCTCAAGCGTCACCCCAGGG...GGCACAGCGGGGCCCCTGCCTGCAGTGGCTGTCGGAGTGGACGCTGGAACCGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000565809.5
3UTR-3UTR TCA 90 bp TCCGTAGGTCAGGTCGCCCACCACGGGGTGGCCCAGGGCACTGCAGTGCACGCGTCAGGTCACCACTGGTaGGGACAGGGCCAGGGTGGT +
Preference number: 2 (lower is better)
Translates to: SVGQVAHHGVAQGTAVHASGHHW*GQGQGG
Trigger: ACCACCCTGGCCCTGTCCTCACCAGTGGTGACCTGA...CGCGTGCACTGCAGTGCCCTGGGCCACCCCGTGGTGGGCGACCTGACCTACGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562070.1
3UTR-3UTR TCA 90 bp GTGTGTCCGGCCTGCGGGATGAGGGCGGTGCCGGATCAAGCTGGGAGCGGGGCCACCCACCTCCCGTCATaGCCCCGCTGCAGTCTTGAA +
Preference number: 2 (lower is better)
Translates to: VCPACGMRAVPDQAGSGATHLPS*PRCSLE
Trigger: TTCAAGACTGCAGCGGGGTCATGACGGGAGGTGGGT...GGCCCCGCTCCCAGCTTGATCCGGCACCGCCCTCATCCCGCAGGCCGGACACAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562070.1
3UTR-3UTR TCA 90 bp GCCGGTCCTCCCGGCCCGAGACTTCTCCGTAGGTCAGGTCGCCCACCACGGGGTCCACACCTATCTCCCTaGCCAGGACCCACCTCCCGT +
Preference number: 2 (lower is better)
Translates to: AGPPGPRLLRRSGRPPRGPHLSP*PGPTSR
Trigger: ACGGGAGGTGGGTCCTGGTCAGGGAGATAGGTGTGG...ACCCCGTGGTGGGCGACCTGACCTACGGAGAAGTCTCGGGCCGGGAGGACCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562070.1
3UTR-3UTR GCA 90 bp CAGAGCAGTGAGGGGCAGAGGACGCAGGGACCAGATGGGTCTCCCAGGCCAGGTACCTGTGATCACGGCTaGCTGGCGCCCCCTGCCGGC +
Preference number: 2 (lower is better)
Translates to: QSSEGQRTQGPDGSPRPGTCDHG*LAPPAG
Trigger: GCCGGCAGGGGGCGCCAGGCAGCCGTGATCACAGGT...ACCTGGCCTGGGAGACCCATCTGGTCCCTGCGTCCTCTGCCCCTCACTGCTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR GCA 90 bp GCTGTAGCCAGGAGCCCAGGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGACCTGTGATCACGGCTaGCTGGCGCCCCCTGCCGGC +
Preference number: 2 (lower is better)
Translates to: AVARSPGCGMGDRGGGTWTCDHG*LAPPAG
Trigger: GCCGGCAGGGGGCGCCAGGCAGCCGTGATCACAGGT...CCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACCTGGGCTCCTGGCTACAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR CCA 90 bp CCAGGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCCCTTCCTCGCAGGCCTaGCCGGGGCAACCCAGTGGG +
Preference number: 2 (lower is better)
Translates to: PGCGMGDRGGGTWQTHSSPSSQA*PGQPSG
Trigger: CCCACTGGGTTGCCCCGGCCAGGCCTGCGAGGAAGG...GGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR CCA 90 bp GGACGCAGGGACCAGATGGGTCTCCCAGGCCAGGTGAGCCCAGAACGGCCCTTCAGGGATGGGCGTGCGTaGCAGGGCCTTGGCCATGGC +
Preference number: 2 (lower is better)
Translates to: GRRDQMGLPGQVSPERPFRDGRA*QGLGHG
Trigger: GCCATGGCCAAGGCCCTGCCACGCACGCCCATCCCT...GAAGGGCCGTTCTGGGCTCACCTGGCCTGGGAGACCCATCTGGTCCCTGCGTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR TCA 90 bp AGGACGCAGGGACCAGATGGGTCTCCCAGGCCAGGTGAGCCCAGAACGGCCCTTTGCGGTCGTCACCTGTaGTCACGGCTGCCTGGCGCC +
Preference number: 2 (lower is better)
Translates to: RTQGPDGSPRPGEPRTALCGRHL*SRLPGA
Trigger: GGCGCCAGGCAGCCGTGATCACAGGTGACGACCGCA...AAGGGCCGTTCTGGGCTCACCTGGCCTGGGAGACCCATCTGGTCCCTGCGTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR TCA 90 bp GCCCAGGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCTGACGCCCCTGGGGTaGCGCTTGAGAGCCGGAAGC +
Preference number: 2 (lower is better)
Translates to: AQVVAWGTEEVGPGRPTALTPLG*RLRAGS
Trigger: GCTTCCGGCTCTCAAGCGTCACCCCAGGGGCGTCAG...AGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACCTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR GCA 90 bp GCCCAGGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTACACGCAGCCGGGCCTaGAGACTCGAGCCCAGCAGG +
Preference number: 2 (lower is better)
Translates to: AQVVAWGTEEVGPGRPTATRSRA*RLEPSR
Trigger: CCTGCTGGGCTCGAGTCTGCAGGCCCGGCTGCGTGT...AGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACCTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR CCA 90 bp GTTGGTGCTCACAGTGGATCTGAGGGATGGGCGTGCGTGGCAGGGCCTTGGCCACCTTCCTCGCAGGCCTaGCCGGGGCAACCCAGTGGG +
Preference number: 2 (lower is better)
Translates to: VGAHSGSEGWACVAGPWPPSSQA*PGQPSG
Trigger: CCCACTGGGTTGCCCCGGCCAGGCCTGCGAGGAAGG...TGGCCAAGGCCCTGCCACGCACGCCCATCCCTCAGATCCACTGTGAGCACCAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR CCA 90 bp GGCCCGAGACTTCTCCGTAGGTCAGGTCGCCCACCACGGGGTGGCCCAGGGCACAGGACAGGGCCAGGGTaGTGCTCGGTCCTGGAGAAT +
Preference number: 2 (lower is better)
Translates to: GPRLLRRSGRPPRGGPGHRTGPG*CSVLEN
Trigger: ATTCTCCAGGACCGAGCACCACCCTGGCCCTGTCCT...GTGCCCTGGGCCACCCCGTGGTGGGCGACCTGACCTACGGAGAAGTCTCGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562070.1
3UTR-3UTR CCA 90 bp GGCCCGAGACTTCTCCGTAGGTCAGGTCGCCCACCACGGGGTGGCCCAGGGCACAGCAGCCTCTTGGGGTaGAACTCTCCCTGTCCCCTG +
Preference number: 2 (lower is better)
Translates to: GPRLLRRSGRPPRGGPGHSSLLG*NSPCPL
Trigger: CAGGGGACAGGGAGAGTTCCACCCCAAGAGGCTGCT...GTGCCCTGGGCCACCCCGTGGTGGGCGACCTGACCTACGGAGAAGTCTCGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562070.1
3UTR-3UTR CCA 90 bp GTGACGTGGCAGAGCTGCCAGCAGGGGCCCAAGAGACTGCAGCAGGTTGGTGCTTCGCCCACCACGGGGTaGCCCAGGGCACTGCAGTGC +
Preference number: 2 (lower is better)
Translates to: VTWQSCQQGPKRLQQVGASPTTG*PRALQC
Trigger: GCACTGCAGTGCCCTGGGCCACCCCGTGGTGGGCGA...AGCACCAACCTGCTGCAGTCTCTTGGGCCCCTGCTGGCAGCTCTGCCACGTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565809.5
3UTR-3UTR CCA 90 bp GCCCAGGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCAGTGCACGCGCAGCTaGTGTGTCCGGCCCGTGAGC +
Preference number: 2 (lower is better)
Translates to: AQVVAWGTEEVGPGRPTAQCTRS*CVRPVS
Trigger: GCTCACGGGCCGGACACACCAGCTGCGCGTGCACTG...AGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACCTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565809.5
3UTR-3UTR CCA 90 bp TCCGGTTCCAGCGTCCACTCCGACAGCCACTGCAGGCAGGGGCCCCGCTGTGCCAAGGCCTGCACGAGCTaGTCCAGCGACTGCAGCAGT +
Preference number: 2 (lower is better)
Translates to: SGSSVHSDSHCRQGPRCAKACTS*SSDCSS
Trigger: ACTGCTGCAGTCGCTGGACCAGCTCGTGCAGGCCTT...GGCACAGCGGGGCCCCTGCCTGCAGTGGCTGTCGGAGTGGACGCTGGAACCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565809.5
3UTR CAA 90 bp CAGGTGAGCCCAGAACGGCCCTTCCCAGCCCCTCTAGAGGGTAGGTaGGGGGCAGTAGCTCACCAGGCCCAGGAGCAGCCCATCCTGGAG +
Preference number: 2 (lower is better)
Translates to: QVSPERPFPAPLEGR*GAVAHQAQEQPILE
Trigger: CTCCAGGATGGGCTGCTCCTGGGCCTGGTGAGCTACTGCCCCCAACCTACCCTCTAGAGGGGCTGGGAAGGGCCGTTCTGGGCTCACCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR TCA 90 bp TGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCCAAGCTTGCGGTCGTCACCTGTaGTCACGGCTGCCTGGCGCC +
Preference number: 2 (lower is better)
Translates to: CGMGDRGGGTWQTHSSQACGRHL*SRLPGA
Trigger: GGCGCCAGGCAGCCGTGATCACAGGTGACGACCGCA...AGCTTGGGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR TCA 90 bp GGACGCAGGGACCAGATGGGTCTCCCAGGCCAGGTGAGCCCAGAACGGCCCTTCCTTGGCCATGGCCCCTaGCCAACCCCTGTGCACCAA +
Preference number: 2 (lower is better)
Translates to: GRRDQMGLPGQVSPERPFLGHGP*PTPVHQ
Trigger: TTGGTGCACAGGGGTTGGTCAGGGGCCATGGCCAAG...GAAGGGCCGTTCTGGGCTCACCTGGCCTGGGAGACCCATCTGGTCCCTGCGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR GCA 90 bp GGCAGAGCTGCCAGCAGGGGCCCAAGAGACTGCAGCAGGTTGGTGCTCACAGTGACACGCAGCCGGGCCTaGAGACTCGAGCCCAGCAGG +
Preference number: 2 (lower is better)
Translates to: GRAASRGPRDCSRLVLTVTRSRA*RLEPSR
Trigger: CCTGCTGGGCTCGAGTCTGCAGGCCCGGCTGCGTGT...CACTGTGAGCACCAACCTGCTGCAGTCTCTTGGGCCCCTGCTGGCAGCTCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR CCA 90 bp GCTGTAGCCAGGAGCCCAGGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGGCAGGGCCTTGGCCATaGCCCCTGACCAACCCCTGT +
Preference number: 2 (lower is better)
Translates to: AVARSPGCGMGDRGGGTWAGPWP*PLTNPC
Trigger: ACAGGGGTTGGTCAGGGGCCATGGCCAAGGCCCTGC...CCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACCTGGGCTCCTGGCTACAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR CCA 90 bp GCTGTAGCCAGGAGCCCAGGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCCACAGCTCCCAAGCTaGGGTCCCGGAGGCAGAGTG +
Preference number: 2 (lower is better)
Translates to: AVARSPGCGMGDRGGGTWPQLPS*GPGGRV
Trigger: CACTCTGCCTCCGGGACCCCAGCTTGGGAGCTGTGG...CCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACCTGGGCTCCTGGCTACAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR TCA 90 bp GGTGTCCGTGGGGATGCGCAGGTAGAAAGCGTGCAGCATCATTCTGAACGGCCGAGGCCCCAGAGCCAGTaGGCAGACGCTCGCTCGCCC +
Preference number: 2 (lower is better)
Translates to: GVRGDAQVESVQHHSERPRPQSQ*ADARSP
Trigger: GGGCGAGCGAGCGTCTGCTCACTGGCTCTGGGGCCT...CGGCCGTTCAGAATGATGCTGCACGCTTTCTACCTGCGCATCCCCACGGACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565809.5
3UTR-3UTR TCA 90 bp CCAAGGCACACGCAGCCGGGCCTGCAGACTCGAGCCCAGCAGGGACCATTAGGTCCCTGGGGTGACGCTTaGGAGCCGGAAGCTGTTCCA +
Preference number: 2 (lower is better)
Translates to: PRHTQPGLQTRAQQGPLGPWGDA*EPEAVP
Trigger: TGGAACAGCTTCCGGCTCTCAAGCGTCACCCCAGGG...ACCTAATGGTCCCTGCTGGGCTCGAGTCTGCAGGCCCGGCTGCGTGTGCCTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR TCA 90 bp CCAGGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCATCTGCACAGAGCAGTaGGGGGCAGAGGACGCAGGG +
Preference number: 2 (lower is better)
Translates to: PGCGMGDRGGGTWQTHSSICTEQ*GAEDAG
Trigger: CCCTGCGTCCTCTGCCCCTCACTGCTCTGTGCAGAT...GGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR TCA 90 bp GCTGTAGCCAGGAGCCCAGGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGATCTGCACAGAGCAGTaGGGGGCAGAGGACGCAGGG +
Preference number: 2 (lower is better)
Translates to: AVARSPGCGMGDRGGGTWICTEQ*GAEDAG
Trigger: CCCTGCGTCCTCTGCCCCTCACTGCTCTGTGCAGAT...CCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACCTGGGCTCCTGGCTACAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR CCA 90 bp GGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCCAAGCAGGGCCTTGGCCATaGCCCCTGACCAACCCCTGT +
Preference number: 2 (lower is better)
Translates to: GCGMGDRGGGTWQTHSSQAGPWP*PLTNPC
Trigger: ACAGGGGTTGGTCAGGGGCCATGGCCAAGGCCCTGC...TTGGGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR CCA 90 bp GCCCAGGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTAGTGGATCTGAGGGATaGGCGTGCGTGGCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: AQVVAWGTEEVGPGRPTASGSEG*ACVAGP
Trigger: AGGCCCTGCCACGCACGCCCATCCCTCAGATCCACT...AGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACCTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR CCA 90 bp GGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCCAACCACAGCTCCCAAGCTaGGGTCCCGGAGGCAGAGTG +
Preference number: 2 (lower is better)
Translates to: GCGMGDRGGGTWQTHSSQPQLPS*GPGGRV
Trigger: CACTCTGCCTCCGGGACCCCAGCTTGGGAGCTGTGG...TTGGGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR CCA 90 bp GGACGCAGGGACCAGATGGGTCTCCCAGGCCAGGTGAGCCCAGAACGGCCCTTCAGAGGAGGTGGGACCTaGCAGACCCACAGCTCCCAA +
Preference number: 2 (lower is better)
Translates to: GRRDQMGLPGQVSPERPFRGGGT*QTHSSQ
Trigger: TTGGGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCT...GAAGGGCCGTTCTGGGCTCACCTGGCCTGGGAGACCCATCTGGTCCCTGCGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR CCA 90 bp CAGGTAGAAAGCGTGCAGCATCATTCTGAACGGCCGGTCCTCCCGGCCCGAGACCAGTGCACGCGCAGCTaGTGTGTCCGGCCCGTGAGC +
Preference number: 2 (lower is better)
Translates to: QVESVQHHSERPVLPARDQCTRS*CVRPVS
Trigger: GCTCACGGGCCGGACACACCAGCTGCGCGTGCACTG...GTCTCGGGCCGGGAGGACCGGCCGTTCAGAATGATGCTGCACGCTTTCTACCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565809.5
ENST00000567283.5
3UTR CAA 90 bp ACGCGCAGCTGGTGTGTCCGGCCCGTGAGCGGCTTCAGCAGCACTTaGGAGACAGGATCGCCTGCGTACAGCCCGTGTTCCAGAACCACG +
Preference number: 2 (lower is better)
Translates to: TRSWCVRPVSGFSST*ETGSPAYSPCSRTT
Trigger: CGTGGTTCTGGAACACGGGCTGTACGCAGGCGATCCTGTCTCCAAAGTGCTGCTGAAGCCGCTCACGGGCCGGACACACCAGCTGCGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567283.5
3UTR-3UTR TCA 90 bp GGCAGAGCTGCCAGCAGGGGCCCAAGAGACTGCAGCAGGTTGGTGCTCACAGTGCCCTGGGGTGACGCTTaGGAGCCGGAAGCTGTTCCA +
Preference number: 2 (lower is better)
Translates to: GRAASRGPRDCSRLVLTVPWGDA*EPEAVP
Trigger: TGGAACAGCTTCCGGCTCTCAAGCGTCACCCCAGGG...CACTGTGAGCACCAACCTGCTGCAGTCTCTTGGGCCCCTGCTGGCAGCTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR TCA 90 bp TGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCCAAGCTCTTGGCCATGGCCCCTaGCCAACCCCTGTGCACCAA +
Preference number: 2 (lower is better)
Translates to: CGMGDRGGGTWQTHSSQALGHGP*PTPVHQ
Trigger: TTGGTGCACAGGGGTTGGTCAGGGGCCATGGCCAAG...AGCTTGGGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR TCA 90 bp GCTGTAGCCAGGAGCCCAGGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGGTCCCGGAGGCAGAGTaGCAATGCATGGCTGTGTGG +
Preference number: 2 (lower is better)
Translates to: AVARSPGCGMGDRGGGTWVPEAE*QCMAVW
Trigger: CCACACAGCCATGCATTGTCACTCTGCCTCCGGGAC...CCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACCTGGGCTCCTGGCTACAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR TCA 90 bp GCCCAGGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTGTCCCGGAGGCAGAGTaGCAATGCATGGCTGTGTGG +
Preference number: 2 (lower is better)
Translates to: AQVVAWGTEEVGPGRPTAVPEAE*QCMAVW
Trigger: CCACACAGCCATGCATTGTCACTCTGCCTCCGGGAC...AGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACCTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR GCA 90 bp GTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCCAAGGTGACGTGGCAGAGCTaGCAGCAGGGGCCCAAGAGA +
Preference number: 2 (lower is better)
Translates to: VVAWGTEEVGPGRPTAPKVTWQS*QQGPKR
Trigger: TCTCTTGGGCCCCTGCTGGCAGCTCTGCCACGTCAC...CTTGGGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR GCA 90 bp CAGCATCATTCTGAACGGCCGGTCCTCCCGGCCCGAGACTTCTCCGTAGGTCAGCCCAGGGCACTGCAGTaGACGCGCAGCTGGTGTGTC +
Preference number: 2 (lower is better)
Translates to: QHHSERPVLPARDFSVGQPRALQ*TRSWCV
Trigger: GACACACCAGCTGCGCGTGCACTGCAGTGCCCTGGG...CTGACCTACGGAGAAGTCTCGGGCCGGGAGGACCGGCCGTTCAGAATGATGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562070.1
ENST00000565809.5
ENST00000567283.5
3UTR-3UTR CCA 90 bp TATTTGGAGTCCCTGGAGCCCTGCTGTAGCCAGGAGCCCAGGTTGTGGCATGGGAGGCAGGCGGTGACGTaGCAGAGCTGCCAGCAGGGG +
Preference number: 2 (lower is better)
Translates to: YLESLEPCCSQEPRLWHGRQAVT*QSCQQG
Trigger: CCCCTGCTGGCAGCTCTGCCACGTCACCGCCTGCCT...CCCATGCCACAACCTGGGCTCCTGGCTACAGCAGGGCTCCAGGGACTCCAAATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
3UTR-3UTR CCA 90 bp GGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCCAACAGGAGCCCAGGTTGTaGCATGGGGGACAGAGGAGG +
Preference number: 2 (lower is better)
Translates to: GCGMGDRGGGTWQTHSSQQEPRL*HGGQRR
Trigger: CCTCCTCTGTCCCCCATGCCACAACCTGGGCTCCTG...TTGGGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR CCA 90 bp ACGTGGCAGAGCTGCCAGCAGGGGCCCAAGAGACTGCAGCAGGTTGGTGCTCACCAGGAGCCCAGGTTGTaGCATGGGGGACAGAGGAGG +
Preference number: 2 (lower is better)
Translates to: TWQSCQQGPKRLQQVGAHQEPRL*HGGQRR
Trigger: CCTCCTCTGTCCCCCATGCCACAACCTGGGCTCCTG...GTGAGCACCAACCTGCTGCAGTCTCTTGGGCCCCTGCTGGCAGCTCTGCCACGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR CCA 90 bp AGTGCACGCGCAGCTGGTGTGTCCGGCCTGCGGGATGAGGGCGGTGCCGGATCACTTGAAGCAGCCTCTTaGGGTGGAACTCTCCCTGTC +
Preference number: 2 (lower is better)
Translates to: SARAAGVSGLRDEGGAGSLEAAS*GGTLPV
Trigger: GACAGGGAGAGTTCCACCCCAAGAGGCTGCTTCAAG...TGATCCGGCACCGCCCTCATCCCGCAGGCCGGACACACCAGCTGCGCGTGCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562070.1
3UTR-3UTR TCA 90 bp TGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCCAAGCTGAACCACTGGTACAGTaGGGCCAAGGCACACGCAGC +
Preference number: 2 (lower is better)
Translates to: CGMGDRGGGTWQTHSSQAEPLVQ*GQGTRS
Trigger: GCTGCGTGTGCCTTGGCCTCACTGTACCAGTGGTTC...AGCTTGGGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR TCA 90 bp GCAGACCTCCACACACTCGGTGTCCGTGGGGATGCGCAGGTAGAAAGCGTGCAGACCCCGCTGCAGTCTTaGAGCAGCCTCTTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: ADLHTLGVRGDAQVESVQTPLQS*SSLLGW
Trigger: CCACCCCAAGAGGCTGCTTCAAGACTGCAGCGGGGT...CTGCACGCTTTCTACCTGCGCATCCCCACGGACACCGAGTGTGTGGAGGTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562070.1
3UTR-3UTR GCA 90 bp ATCCAGGGAGGGCAGGAAGGGGTCAGGCGTGCAGACCTCCACACACTCGGTGTCGGAGACAGGATCGCCTaGGTACAGCCCGTGTTCCAG +
Preference number: 2 (lower is better)
Translates to: IQGGQEGVRRADLHTLGVGDRIA*VQPVFQ
Trigger: CTGGAACACGGGCTGTACGCAGGCGATCCTGTCTCC...GACACCGAGTGTGTGGAGGTCTGCACGCCTGACCCCTTCCTGCCCTCCCTGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567283.5
3UTR-3UTR CCA 90 bp TCCGGGCAGAGAGGGAACCACTGGTACAGTGAGGCCAAGGCACACGCAGCCGGGGCCTATCCCAAAACCTaGCCCTGCCTCTTCCTGAGG +
Preference number: 2 (lower is better)
Translates to: SGQRGNHWYSEAKAHAAGAYPKT*PCLFLR
Trigger: CCTCAGGAAGAGGCAGGGCCAGGTTTTGGGATAGGC...CCCGGCTGCGTGTGCCTTGGCCTCACTGTACCAGTGGTTCCCTCTCTGCCCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR CCA 90 bp AGGACGCAGGGACCAGATGGGTCTCCCAGGCCAGGTGAGCCCAGAACGGCCCTTGCCTATCCCAAAACCTaGCCCTGCCTCTTCCTGAGG +
Preference number: 2 (lower is better)
Translates to: RTQGPDGSPRPGEPRTALAYPKT*PCLFLR
Trigger: CCTCAGGAAGAGGCAGGGCCAGGTTTTGGGATAGGC...AAGGGCCGTTCTGGGCTCACCTGGCCTGGGAGACCCATCTGGTCCCTGCGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR CCA 90 bp GGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCCAAAGAGGAGGTGGGACCTaGCAGACCCACAGCTCCCAA +
Preference number: 2 (lower is better)
Translates to: GCGMGDRGGGTWQTHSSQRGGGT*QTHSSQ
Trigger: TTGGGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCT...TTGGGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR TCA 90 bp CCAGGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCCACCAAACACCACACTaGGCTCAGAATCCGGGCAGA +
Preference number: 2 (lower is better)
Translates to: PGCGMGDRGGGTWQTHSSHQTPH*AQNPGR
Trigger: TCTGCCCGGATTCTGAGCTCAGTGTGGTGTTTGGTG...GGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR TCA 90 bp GCCCAGGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCACCAAACACCACACTaGGCTCAGAATCCGGGCAGA +
Preference number: 2 (lower is better)
Translates to: AQVVAWGTEEVGPGRPTAHQTPH*AQNPGR
Trigger: TCTGCCCGGATTCTGAGCTCAGTGTGGTGTTTGGTG...AGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACCTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR TCA 90 bp TATTTGGAGTCCCTGGAGCCCTGCTGTAGCCAGGAGCCCAGGTTGTGGCATGGGCTTGGCCATGGCCCCTaGCCAACCCCTGTGCACCAA +
Preference number: 2 (lower is better)
Translates to: YLESLEPCCSQEPRLWHGLGHGP*PTPVHQ
Trigger: TTGGTGCACAGGGGTTGGTCAGGGGCCATGGCCAAG...CCCATGCCACAACCTGGGCTCCTGGCTACAGCAGGGCTCCAGGGACTCCAAATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
3UTR-3UTR GCA 90 bp CCAGGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCCCTGACCAACCCCTGTaGACCAAACACCACACTGAG +
Preference number: 2 (lower is better)
Translates to: PGCGMGDRGGGTWQTHSSPDQPL*TKHHTE
Trigger: CTCAGTGTGGTGTTTGGTGCACAGGGGTTGGTCAGG...GGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR GCA 90 bp GGCAGAGCTGCCAGCAGGGGCCCAAGAGACTGCAGCAGGTTGGTGCTCACAGTGAGGGGCCCAAGAGACTaGAGCAGGTTGGTGCTCACA +
Preference number: 2 (lower is better)
Translates to: GRAASRGPRDCSRLVLTVRGPRD*SRLVLT
Trigger: TGTGAGCACCAACCTGCTGCAGTCTCTTGGGCCCCT...CACTGTGAGCACCAACCTGCTGCAGTCTCTTGGGCCCCTGCTGGCAGCTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR CAA 90 bp ATTTATTTGGAGTCCCTGGAGCCCTGCTGTAGCCAGGAGCCCAGGTaGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAG +
Preference number: 2 (lower is better)
Translates to: IYLESLEPCCSQEPR*WHGGQRRWDLADPQ
Trigger: CTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACCTGGGCTCCTGGCTACAGCAGGGCTCCAGGGACTCCAAATAAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
3UTR-3UTR TCA 90 bp GTGACGTGGCAGAGCTGCCAGCAGGGGCCCAAGAGACTGCAGCAGGTTGGTGCTCACCAAACACCACACTaGGCTCAGAATCCGGGCAGA +
Preference number: 2 (lower is better)
Translates to: VTWQSCQQGPKRLQQVGAHQTPH*AQNPGR
Trigger: TCTGCCCGGATTCTGAGCTCAGTGTGGTGTTTGGTG...AGCACCAACCTGCTGCAGTCTCTTGGGCCCCTGCTGGCAGCTCTGCCACGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR TCA 90 bp TATTTGGAGTCCCTGGAGCCCTGCTGTAGCCAGGAGCCCAGGTTGTGGCATGGGGTCCCGGAGGCAGAGTaGCAATGCATGGCTGTGTGG +
Preference number: 2 (lower is better)
Translates to: YLESLEPCCSQEPRLWHGVPEAE*QCMAVW
Trigger: CCACACAGCCATGCATTGTCACTCTGCCTCCGGGAC...CCCATGCCACAACCTGGGCTCCTGGCTACAGCAGGGCTCCAGGGACTCCAAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
3UTR-3UTR CCA 90 bp AAGCTGGGGTCCCGGAGGCAGAGTGACAATGCATGGCTGTGTGGGAGCCAGGCACACACTCGGTGTCCGTaGGGATGCGCAGGTAGAAAG +
Preference number: 2 (lower is better)
Translates to: KLGSRRQSDNAWLCGSQAHTRCP*GCAGRK
Trigger: CTTTCTACCTGCGCATCCCCACGGACACCGAGTGTG...TGCCTGGCTCCCACACAGCCATGCATTGTCACTCTGCCTCCGGGACCCCAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565809.5
3UTR-3UTR TCA 90 bp CGGATCAAGCTGGGAGCGGGGCCGATCCACACCTATCTCCCTGACCAGGACCCACCCTGTCCCCTGCCATaGGTGAGGATGACAGTATTT +
Preference number: 2 (lower is better)
Translates to: RIKLGAGPIHTYLPDQDPPCPLP*VRMTVF
Trigger: AAATACTGTCATCCTCACTCATGGCAGGGGACAGGG...TGGGTCCTGGTCAGGGAGATAGGTGTGGATCGGCCCCGCTCCCAGCTTGATCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562070.1
3UTR-3UTR GCA 90 bp AAGCTGGGGTCCCGGAGGCAGAGTGACAATGCATGGCTGTGTGGGAGCCAGGCACCTGACCAACCCCTGTaGACCAAACACCACACTGAG +
Preference number: 2 (lower is better)
Translates to: KLGSRRQSDNAWLCGSQAPDQPL*TKHHTE
Trigger: CTCAGTGTGGTGTTTGGTGCACAGGGGTTGGTCAGG...TGCCTGGCTCCCACACAGCCATGCATTGTCACTCTGCCTCCGGGACCCCAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR CCA 90 bp TGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCCAAGCTTTTATTTGGAGTCCCTaGAGCCCTGCTGTAGCCAGG +
Preference number: 2 (lower is better)
Translates to: CGMGDRGGGTWQTHSSQAFIWSP*SPAVAR
Trigger: CCTGGCTACAGCAGGGCTCCAGGGACTCCAAATAAA...AGCTTGGGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
3UTR TCA 72 bp GCATCAGTCCCACGGCCGCGGTGCGGTCGTCACCTGTaGTCACGGCTGCCTGGCGCCCCCTGCCGGCCCCAC +
Preference number: 3 (lower is better)
Translates to: ASVPRPRCGRHL*SRLPGAPCRPH
Trigger: GTGGGGCCGGCAGGGGGCGCCAGGCAGCCGTGATCACAGGTGACGACCGCACCGCGGCCGTGGGACTGATGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR GCA 72 bp AGGTCGCCCACCACGGGGTGGCCCAGGGCACTGCAGTaGACGCGCAGCTGGTGTGTCCGGCCCGTGAGCGGC +
Preference number: 3 (lower is better)
Translates to: RSPTTGWPRALQ*TRSWCVRPVSG
Trigger: GCCGCTCACGGGCCGGACACACCAGCTGCGCGTGCACTGCAGTGCCCTGGGCCACCCCGTGGTGGGCGACCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565809.5
ENST00000567283.5
3UTR TCA 72 bp CAGTGCACGCGCAGCTGGTGTGTCCGGCCTGCGGGATaGGGGCGGTGCCGGATCAAGCTGGGAGCGGGGCCG +
Preference number: 3 (lower is better)
Translates to: QCTRSWCVRPAG*GRCRIKLGAGP
Trigger: CGGCCCCGCTCCCAGCTTGATCCGGCACCGCCCTCATCCCGCAGGCCGGACACACCAGCTGCGCGTGCACTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562070.1
3UTR GCA 72 bp AGGTCAGGTCGCCCACCACGGGGTGGCCCAGGGCACTaGAGTGCACGCGCAGCTGGTGTGTCCGGCCTGCGG +
Preference number: 3 (lower is better)
Translates to: RSGRPPRGGPGH*SARAAGVSGLR
Trigger: CCGCAGGCCGGACACACCAGCTGCGCGTGCACTGCAGTGCCCTGGGCCACCCCGTGGTGGGCGACCTGACCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562070.1
3UTR GCA 72 bp GGCACTGCAGTGCACGCGCAGCTGGTGTGTCCGGCCTaGGGGATGAGGGCGGTGCCGGATCAAGCTGGGAGC +
Preference number: 3 (lower is better)
Translates to: GTAVHAQLVCPA*GMRAVPDQAGS
Trigger: GCTCCCAGCTTGATCCGGCACCGCCCTCATCCCGCAGGCCGGACACACCAGCTGCGCGTGCACTGCAGTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562070.1
3UTR CCA 72 bp ACGGGGTGGCCCAGGGCACTGCAGTGCACGCGCAGCTaGTGTGTCCGGCCCGTGAGCGGCTTCAGCAGCACT +
Preference number: 3 (lower is better)
Translates to: TGWPRALQCTRS*CVRPVSGFSST
Trigger: AGTGCTGCTGAAGCCGCTCACGGGCCGGACACACCAGCTGCGCGTGCACTGCAGTGCCCTGGGCCACCCCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567283.5
3UTR CCA 72 bp TCCGGCCTGCGGGATGAGGGCGGTGCCGGATCAAGCTaGGAGCGGGGCCGATCCACACCTATCTCCCTGACC +
Preference number: 3 (lower is better)
Translates to: SGLRDEGGAGSS*ERGRSTPISLT
Trigger: GGTCAGGGAGATAGGTGTGGATCGGCCCCGCTCCCAGCTTGATCCGGCACCGCCCTCATCCCGCAGGCCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562070.1
3UTR CCA 72 bp TCAGGGTCGGGGGTGGCCCGTAAGGCCTGCACGAGCTaGTCCAGCGACTGCAGCAGTGTGTGGGGGCTCCAG +
Preference number: 3 (lower is better)
Translates to: SGSGVARKACTS*SSDCSSVWGLQ
Trigger: CTGGAGCCCCCACACACTGCTGCAGTCGCTGGACCAGCTCGTGCAGGCCTTACGGGCCACCCCCGACCCTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000565809.5
3UTR TCA 72 bp CAAGCTGGGAGCGGGGCCGATCCACACCTATCTCCCTaGCCAGGACCCACCTCCCGTCATGACCCCGCTGCA +
Preference number: 3 (lower is better)
Translates to: QAGSGADPHLSP*PGPTSRHDPAA
Trigger: TGCAGCGGGGTCATGACGGGAGGTGGGTCCTGGTCAGGGAGATAGGTGTGGATCGGCCCCGCTCCCAGCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562070.1
3UTR CCA 72 bp CCCAAGCTGGGGTCCCGGAGGCAGAGTGACAATGCATaGCTGTGTGGGAGCCAGGCAGGCGGTGACGTGGCA +
Preference number: 3 (lower is better)
Translates to: PKLGSRRQSDNA*LCGSQAGGDVA
Trigger: TGCCACGTCACCGCCTGCCTGGCTCCCACACAGCCATGCATTGTCACTCTGCCTCCGGGACCCCAGCTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR CAA 90 bp GGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCCAAAGCCAGGAGCCCAGGTaGTGGCATGGGGGACAGAGG +
Preference number: 3 (lower is better)
Translates to: GCGMGDRGGGTWQTHSSQSQEPR*WHGGQR
Trigger: CCTCTGTCCCCCATGCCACAACCTGGGCTCCTGGCT...TTGGGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR CCA 72 bp TCTGAGGGATGGGCGTGCGTGGCAGGGCCTTGGCCATaGCCCCTGACCAACCCCTGTGCACCAAACACCACA +
Preference number: 3 (lower is better)
Translates to: SEGWACVAGPWP*PLTNPCAPNTT
Trigger: TGTGGTGTTTGGTGCACAGGGGTTGGTCAGGGGCCATGGCCAAGGCCCTGCCACGCACGCCCATCCCTCAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR CAA 90 bp CCAGGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCCCTCTAGAGGGTAGGTaGGGGGCAGTAGCTCACCAG +
Preference number: 3 (lower is better)
Translates to: PGCGMGDRGGGTWQTHSSPLEGR*GAVAHQ
Trigger: CTGGTGAGCTACTGCCCCCAACCTACCCTCTAGAGG...GGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR CAA 90 bp TCCGGGCAGAGAGGGAACCACTGGTACAGTGAGGCCAAGGCACACGCAGCCGGGCCTCTAGAGGGTAGGTaGGGGGCAGTAGCTCACCAG +
Preference number: 3 (lower is better)
Translates to: SGQRGNHWYSEAKAHAAGPLEGR*GAVAHQ
Trigger: CTGGTGAGCTACTGCCCCCAACCTACCCTCTAGAGG...CCCGGCTGCGTGTGCCTTGGCCTCACTGTACCAGTGGTTCCCTCTCTGCCCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR CCA 72 bp AGGAGGTGGGACCTGGCAGACCCACAGCTCCCAAGCTaGGGTCCCGGAGGCAGAGTGACAATGCATGGCTGT +
Preference number: 3 (lower is better)
Translates to: RRWDLADPQLPS*GPGGRVTMHGC
Trigger: ACAGCCATGCATTGTCACTCTGCCTCCGGGACCCCAGCTTGGGAGCTGTGGGTCTGCCAGGTCCCACCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR CAA 90 bp GGCAGAGCTGCCAGCAGGGGCCCAAGAGACTGCAGCAGGTTGGTGCTCACAGTGCCTCTAGAGGGTAGGTaGGGGGCAGTAGCTCACCAG +
Preference number: 3 (lower is better)
Translates to: GRAASRGPRDCSRLVLTVPLEGR*GAVAHQ
Trigger: CTGGTGAGCTACTGCCCCCAACCTACCCTCTAGAGG...CACTGTGAGCACCAACCTGCTGCAGTCTCTTGGGCCCCTGCTGGCAGCTCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR CAA 90 bp CCAGGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCAGAGACTGCAGCAGGTaGGTGCTCACAGTGGATCTG +
Preference number: 3 (lower is better)
Translates to: PGCGMGDRGGGTWQTHSSRDCSR*VLTVDL
Trigger: CAGATCCACTGTGAGCACCAACCTGCTGCAGTCTCT...GGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
3UTR-3UTR CAA 90 bp GTAGAAAGCGTGCAGCATCATTCTGAACGGCCGGTCCTCCCGGCCCGAGACTTCGACCCCGCTGCAGTCTaGAAGCAGCCTCTTGGGGTG +
Preference number: 3 (lower is better)
Translates to: VESVQHHSERPVLPARDFDPAAV*KQPLGV
Trigger: CACCCCAAGAGGCTGCTTCAAGACTGCAGCGGGGTC...GAAGTCTCGGGCCGGGAGGACCGGCCGTTCAGAATGATGCTGCACGCTTTCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562070.1
3UTR TCA 72 bp TGGGGATGCGCAGGTAGAAAGCGTGCAGCATCATTCTaGACGGCCGGTCCTCCCGGCCCGAGACTTCTCCGT +
Preference number: 3 (lower is better)
Translates to: WGCAGRKRAASF*TAGPPGPRLLR
Trigger: ACGGAGAAGTCTCGGGCCGGGAGGACCGGCCGTTCAGAATGATGCTGCACGCTTTCTACCTGCGCATCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562070.1
ENST00000565809.5
ENST00000567283.5
3UTR CCA 72 bp GGTCAGGCGTGCAGACCTCCACACACTCGGTGTCCGTaGGGATGCGCAGGTAGAAAGCGTGCAGCATCATTC +
Preference number: 3 (lower is better)
Translates to: GQACRPPHTRCP*GCAGRKRAASF
Trigger: GAATGATGCTGCACGCTTTCTACCTGCGCATCCCCACGGACACCGAGTGTGTGGAGGTCTGCACGCCTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562070.1
ENST00000565809.5
ENST00000567283.5
3UTR TCA 72 bp CTGCGTACAGCCCGTGTTCCAGAACCACGAGATCTGTaGGGCTTGGCTTTGGGTTCTCACAACCCTGCGAGC +
Preference number: 3 (lower is better)
Translates to: LRTARVPEPRDL*GLALGSHNPAS
Trigger: GCTCGCAGGGTTGTGAGAACCCAAAGCCAAGCCTCACAGATCTCGTGGTTCTGGAACACGGGCTGTACGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565503.5
3UTR GCA 72 bp GAGCGGCTTCAGCAGCACTTTGGAGACAGGATCGCCTaGGTACAGCCCGTGTTCCAGAACCACGAGATCTGT +
Preference number: 3 (lower is better)
Translates to: ERLQQHFGDRIA*VQPVFQNHEIC
Trigger: ACAGATCTCGTGGTTCTGGAACACGGGCTGTACGCAGGCGATCCTGTCTCCAAAGTGCTGCTGAAGCCGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565503.5
ENST00000567283.5
3UTR CCA 72 bp CAGCCCGTGTTCCAGAACCACGAGATCTGTGAGGCTTaGCTTTGGGTTCTCACAACCCTGCGAGCCCTCGAT +
Preference number: 3 (lower is better)
Translates to: QPVFQNHEICEA*LWVLTTLRALD
Trigger: ATCGAGGGCTCGCAGGGTTGTGAGAACCCAAAGCCAAGCCTCACAGATCTCGTGGTTCTGGAACACGGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565503.5
3UTR CCA 72 bp GTGTTCCAGAACCACGAGATCTGTGAGGCTTGGCTTTaGGTTCTCACAACCCTGCGAGCCCTCGATGCACAT +
Preference number: 3 (lower is better)
Translates to: VFQNHEICEAWL*VLTTLRALDAH
Trigger: ATGTGCATCGAGGGCTCGCAGGGTTGTGAGAACCCAAAGCCAAGCCTCACAGATCTCGTGGTTCTGGAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565503.5
3UTR TCA 72 bp AGCCTCTTGGGGTGGAACTCTCCCTGTCCCCTGCCATaGGTGAGGATGACAGTATTTAGGACAGAAGATTGT +
Preference number: 3 (lower is better)
Translates to: SLLGWNSPCPLP*VRMTVFRTEDC
Trigger: ACAATCTTCTGTCCTAAATACTGTCATCCTCACTCATGGCAGGGGACAGGGAGAGTTCCACCCCAAGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562070.1
CDS-3UTR GCA 90 bp CCCGGCCCGAGACTTCTCCGTAGGTCAGGTCGCCCACCACGGGGTGGCCCAGGGCCATGGCCGGCCTGCTaGCGGGCCGTGCAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: PGPRLLRRSGRPPRGGPGPWPAC*RAVQSR
Trigger: CCTGGACTGCACGGCCCGGCAGCAGGCCGGCCATGG...CCCTGGGCCACCCCGTGGTGGGCGACCTGACCTACGGAGAAGTCTCGGGCCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565809.5
ENST00000567283.5
CDS-3UTR GCA 90 bp GGGCATGTGGGCAGGAAGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTCCACCCGGGCTCCGGTaGGAAGCCACCGAGCCGGGT +
Preference number: 4 (lower is better)
Translates to: GHVGRKALGIPHQSHGRGPPGLR*EATEPG
Trigger: ACCCGGCTCGGTGGCTTCGCACCGGAGCCCGGGTGG...ACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCTTCCTGCCCACATGCCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561734.5
CDS-3UTR TCA 90 bp ATGTGGGCAGGAAGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTGCGGAGGCCCCAGAGCCAGTaGGCAGACGCTCGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: MWAGRPSGSRISPTAAVRRPQSQ*ADARSP
Trigger: GGGCGAGCGAGCGTCTGCTCACTGGCTCTGGGGCCT...CCGCACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCTTCCTGCCCACAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp GGCCGCGGTGCGGTCGTCACCTGTGATCACGGCTGCCTGGCGCCCCCTGCCGGCCCCTGGGGTGACGCTTaGGAGCCGGAAGCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: GRGAVVTCDHGCLAPPAGPWGDA*EPEAVP
Trigger: TGGAACAGCTTCCGGCTCTCAAGCGTCACCCCAGGG...GCCGGCAGGGGGCGCCAGGCAGCCGTGATCACAGGTGACGACCGCACCGCGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp GCCCGAGACTTCTCCGTAGGTCAGGTCGCCCACCACGGGGTGGCCCAGGGCACTCCTGCTGCCGGGCCGTaGAGTCCAGGCCCCCGATGC +
Preference number: 4 (lower is better)
Translates to: ARDFSVGQVAHHGVAQGTPAAGP*SPGPRC
Trigger: GCATCGGGGGCCTGGACTGCACGGCCCGGCAGCAGG...AGTGCCCTGGGCCACCCCGTGGTGGGCGACCTGACCTACGGAGAAGTCTCGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000565809.5
ENST00000567283.5
CDS-3UTR GCA 90 bp CTATCCTCGGGGTCAGGGTCGGGGGTGGCCCGTAAGGCCTGCACGAGCTGGTCCCCATGGCCGGCCTGCTaGCGGGCCGTGCAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LSSGSGSGVARKACTSWSPWPAC*RAVQSR
Trigger: CCTGGACTGCACGGCCCGGCAGCAGGCCGGCCATGG...GGACCAGCTCGTGCAGGCCTTACGGGCCACCCCCGACCCTGACCCCGAGGATAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000565809.5
CDS-3UTR GCA 90 bp GGCCGCGGTGCGGTCGTCACCTGTGATCACGGCTGCCTGGCGCCCCCTGCCGGCGGAAGGGGTCAGGCGTaGAGACCTCCACACACTCGG +
Preference number: 4 (lower is better)
Translates to: GRGAVVTCDHGCLAPPAGGRGQA*RPPHTR
Trigger: CCGAGTGTGTGGAGGTCTGCACGCCTGACCCCTTCC...GCCGGCAGGGGGCGCCAGGCAGCCGTGATCACAGGTGACGACCGCACCGCGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp CCCGGCCCGAGACTTCTCCGTAGGTCAGGTCGCCCACCACGGGGTGGCCCAGGGCAGTGCACGCGCAGCTaGTGTGTCCGGCCCGTGAGC +
Preference number: 4 (lower is better)
Translates to: PGPRLLRRSGRPPRGGPGQCTRS*CVRPVS
Trigger: GCTCACGGGCCGGACACACCAGCTGCGCGTGCACTG...CCCTGGGCCACCCCGTGGTGGGCGACCTGACCTACGGAGAAGTCTCGGGCCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565809.5
ENST00000567283.5
CDS-3UTR CCA 90 bp ATGTGGGCAGGAAGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTGCGGTCGCCCACCACGGGGTaGCCCAGGGCACTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: MWAGRPSGSRISPTAAVRSPTTG*PRALQC
Trigger: GCACTGCAGTGCCCTGGGCCACCCCGTGGTGGGCGA...CCGCACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCTTCCTGCCCACAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp CTCCGTAGGTCAGGTCGCCCACCACGGGGTGGCCCAGGGCACTGCAGTGCACGCTCGCCCACCACGGGGTaGCCCAGGGCACTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: LRRSGRPPRGGPGHCSARSPTTG*PRALQC
Trigger: GCACTGCAGTGCCCTGGGCCACCCCGTGGTGGGCGA...GCGTGCACTGCAGTGCCCTGGGCCACCCCGTGGTGGGCGACCTGACCTACGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562070.1
ENST00000565809.5
ENST00000567283.5
CDS-3UTR CCA 90 bp TCCCACGGCCGCGGTGCGGTCGTCACCTGTGATCACGGCTGCCTGGCGCCCCCTGGTCAGGGTCGGGGGTaGCCCGTAAGGCCTGCACGA +
Preference number: 4 (lower is better)
Translates to: SHGRGAVVTCDHGCLAPPGQGRG*PVRPAR
Trigger: TCGTGCAGGCCTTACGGGCCACCCCCGACCCTGACC...AGGGGGCGCCAGGCAGCCGTGATCACAGGTGACGACCGCACCGCGGCCGTGGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp ATGTGGGCAGGAAGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTGCGGCCTTCCTCGCAGGCCTaGCCGGGGCAACCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: MWAGRPSGSRISPTAAVRPSSQA*PGQPSG
Trigger: CCCACTGGGTTGCCCCGGCCAGGCCTGCGAGGAAGG...CCGCACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCTTCCTGCCCACAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp CACGGGGTGGCCCAGGGCACTGCAGTGCACGCGCAGCTGGTGTGTCCGGCCCGTAGGGATGGGCGTGCGTaGCAGGGCCTTGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: HGVAQGTAVHAQLVCPARRDGRA*QGLGHG
Trigger: GCCATGGCCAAGGCCCTGCCACGCACGCCCATCCCT...ACGGGCCGGACACACCAGCTGCGCGTGCACTGCAGTGCCCTGGGCCACCCCGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565809.5
CDS-3UTR CCA 90 bp TCCCACGGCCGCGGTGCGGTCGTCACCTGTGATCACGGCTGCCTGGCGCCCCCTAGGCAGGCGGTGACGTaGCAGAGCTGCCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: SHGRGAVVTCDHGCLAPPRQAVT*QSCQQG
Trigger: CCCCTGCTGGCAGCTCTGCCACGTCACCGCCTGCCT...AGGGGGCGCCAGGCAGCCGTGATCACAGGTGACGACCGCACCGCGGCCGTGGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp GAAGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTGCGGTCGTCACCTGCTGACGCCCCTGGGGTaGCGCTTGAGAGCCGGAAGC +
Preference number: 4 (lower is better)
Translates to: EGPRDPASVPRPRCGRHLLTPLG*RLRAGS
Trigger: GCTTCCGGCTCTCAAGCGTCACCCCAGGGGCGTCAG...CAGGTGACGACCGCACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp ATGTGGGCAGGAAGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTGCGGCTGACGCCCCTGGGGTaGCGCTTGAGAGCCGGAAGC +
Preference number: 4 (lower is better)
Translates to: MWAGRPSGSRISPTAAVRLTPLG*RLRAGS
Trigger: GCTTCCGGCTCTCAAGCGTCACCCCAGGGGCGTCAG...CCGCACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCTTCCTGCCCACAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp ATGTGGGCAGGAAGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTGCGGGGTGGCCCAGGGCACTaGAGTGCACGCGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: MWAGRPSGSRISPTAAVRGGPGH*SARAAG
Trigger: ACCAGCTGCGCGTGCACTGCAGTGCCCTGGGCCACC...CCGCACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCTTCCTGCCCACAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp CTCCGTAGGTCAGGTCGCCCACCACGGGGTGGCCCAGGGCACTGCAGTGCACGCGGTGGCCCAGGGCACTaGAGTGCACGCGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LRRSGRPPRGGPGHCSARGGPGH*SARAAG
Trigger: ACCAGCTGCGCGTGCACTGCAGTGCCCTGGGCCACC...GCGTGCACTGCAGTGCCCTGGGCCACCCCGTGGTGGGCGACCTGACCTACGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562070.1
ENST00000565809.5
ENST00000567283.5
CDS-3UTR GCA 90 bp GCCCGAGACTTCTCCGTAGGTCAGGTCGCCCACCACGGGGTGGCCCAGGGCACTACCTGTGATCACGGCTaGCTGGCGCCCCCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: ARDFSVGQVAHHGVAQGTTCDHG*LAPPAG
Trigger: GCCGGCAGGGGGCGCCAGGCAGCCGTGATCACAGGT...AGTGCCCTGGGCCACCCCGTGGTGGGCGACCTGACCTACGGAGAAGTCTCGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565809.5
CDS-3UTR GCA 90 bp AGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTGCGGTCGTCACCTGTGACACGCAGCCGGGCCTaGAGACTCGAGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RPSGSRISPTAAVRSSPVTRSRA*RLEPSR
Trigger: CCTGCTGGGCTCGAGTCTGCAGGCCCGGCTGCGTGT...CACAGGTGACGACCGCACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp GCTGTTCCAGGAGGAGGGAGGGGCCTCGGTTTCTCCCGGGGCATGTGGGCAGGAGCTCCATGGCCGGCCTaGCGAGCCACGCGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: AVPGGGRGLGFSRGMWAGAPWPA*RATRGC
Trigger: GCACCCACGCGTGGCTCGGCAGGCCGGCCATGGAGC...TCCTGCCCACATGCCCCGGGAGAAACCGAGGCCCCTCCCTCCTCCTGGAACAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561734.5
CDS-3UTR CCA 90 bp CCTCCCGGCCCGAGACTTCTCCGTAGGTCAGGTCGCCCACCACGGGGTGGCCCAGCGACCCAGAGACCCTaGAAGCTCCGCTCCGGACGC +
Preference number: 4 (lower is better)
Translates to: PPGPRLLRRSGRPPRGGPATQRP*KLRSGR
Trigger: GCGTCCGGAGCGGAGCTTCCAGGGTCTCTGGGTCGC...TGGGCCACCCCGTGGTGGGCGACCTGACCTACGGAGAAGTCTCGGGCCGGGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565809.5
CDS-3UTR CCA 90 bp CTCCGTAGGTCAGGTCGCCCACCACGGGGTGGCCCAGGGCACTGCAGTGCACGCAGCCCTCGATGCACATaGTGTGGGCCCGGCCCTCCG +
Preference number: 4 (lower is better)
Translates to: LRRSGRPPRGGPGHCSARSPRCT*CGPGPP
Trigger: CGGAGGGCCGGGCCCACACCATGTGCATCGAGGGCT...GCGTGCACTGCAGTGCCCTGGGCCACCCCGTGGTGGGCGACCTGACCTACGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562070.1
ENST00000567283.5
CDS-3UTR CCA 90 bp TCCGTAGGTCAGGTCGCCCACCACGGGGTGGCCCAGGGCACTGCAGTGCACGCGAGCCCTCGATGCACATaGTGTGGGCCCGGCCCTCCG +
Preference number: 4 (lower is better)
Translates to: SVGQVAHHGVAQGTAVHASPRCT*CGPGPP
Trigger: CGGAGGGCCGGGCCCACACCATGTGCATCGAGGGCT...CGCGTGCACTGCAGTGCCCTGGGCCACCCCGTGGTGGGCGACCTGACCTACGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562070.1
ENST00000567283.5
CDS-3UTR CCA 90 bp GAAGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTGCGGTCGTCACCTGCAGTGCACGCGCAGCTaGTGTGTCCGGCCCGTGAGC +
Preference number: 4 (lower is better)
Translates to: EGPRDPASVPRPRCGRHLQCTRS*CVRPVS
Trigger: GCTCACGGGCCGGACACACCAGCTGCGCGTGCACTG...CAGGTGACGACCGCACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCTTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp GAGCCGGAAGCTGTTCCAGGAGGAGGGAGGGGCCTCGGTTTCTCCCGGGGCATGGTGATCACGGCTGCCTaGCGCCCCCTGCCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: EPEAVPGGGRGLGFSRGMVITAA*RPLPAP
Trigger: TGGGGCCGGCAGGGGGCGCCAGGCAGCCGTGATCAC...CATGCCCCGGGAGAAACCGAGGCCCCTCCCTCCTCCTGGAACAGCTTCCGGCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp CACGGGGTGGCCCAGGGCACTGCAGTGCACGCGCAGCTGGTGTGTCCGGCCCGTGCAGGGCCTTGGCCATaGCCCCTGACCAACCCCTGT +
Preference number: 4 (lower is better)
Translates to: HGVAQGTAVHAQLVCPARAGPWP*PLTNPC
Trigger: ACAGGGGTTGGTCAGGGGCCATGGCCAAGGCCCTGC...ACGGGCCGGACACACCAGCTGCGCGTGCACTGCAGTGCCCTGGGCCACCCCGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000565809.5
CDS-3UTR CCA 90 bp GAAGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTGCGGTCGTCACCTGAGGGATGGGCGTGCGTaGCAGGGCCTTGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: EGPRDPASVPRPRCGRHLRDGRA*QGLGHG
Trigger: GCCATGGCCAAGGCCCTGCCACGCACGCCCATCCCT...CAGGTGACGACCGCACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCTTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp GTGTCCGGCCTGCGGGATGAGGGCGGTGCCGGATCAAGCTGGGAGCGGGGCCGAGGTGCCGGATCAAGCTaGGAGCGGGGCCGATCCACA +
Preference number: 4 (lower is better)
Translates to: VSGLRDEGGAGSSWERGRGAGSS*ERGRST
Trigger: TGTGGATCGGCCCCGCTCCCAGCTTGATCCGGCACC...TCGGCCCCGCTCCCAGCTTGATCCGGCACCGCCCTCATCCCGCAGGCCGGACAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562070.1
CDS-3UTR TCA 90 bp CTCCCGGCCCGAGACTTCTCCGTAGGTCAGGTCGCCCACCACGGGGTGGCCCAGGGTGTGTCCGGCCCGTaGGCGGCTTCAGCAGCACTT +
Preference number: 4 (lower is better)
Translates to: LPARDFSVGQVAHHGVAQGVSGP*AASAAL
Trigger: AAGTGCTGCTGAAGCCGCTCACGGGCCGGACACACC...CTGGGCCACCCCGTGGTGGGCGACCTGACCTACGGAGAAGTCTCGGGCCGGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565809.5
ENST00000567283.5
CDS-3UTR TCA 90 bp ATGTGGGCAGGAAGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTGCGGCGTGCAGCATCATTCTaGACGGCCGGTCCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: MWAGRPSGSRISPTAAVRRAASF*TAGPPG
Trigger: GCCGGGAGGACCGGCCGTTCAGAATGATGCTGCACG...CCGCACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCTTCCTGCCCACAT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp GCCGGTCCTCCCGGCCCGAGACTTCTCCGTAGGTCAGGTCGCCCACCACGGGGTCGTGCAGCATCATTCTaGACGGCCGGTCCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: AGPPGPRLLRRSGRPPRGRAASF*TAGPPG
Trigger: GCCGGGAGGACCGGCCGTTCAGAATGATGCTGCACG...ACCCCGTGGTGGGCGACCTGACCTACGGAGAAGTCTCGGGCCGGGAGGACCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562070.1
ENST00000565809.5
ENST00000567283.5
CDS-3UTR TCA 90 bp ACGGCCGGTCCTCCCGGCCCGAGACTTCTCCGTAGGTCAGGTCGCCCACCACGGGCAACCCAGTGGGCCTaGTGCTGCCTGGCACCTCGA +
Preference number: 4 (lower is better)
Translates to: TAGPPGPRLLRRSGRPPRATQWA*CCLAPR
Trigger: TCGAGGTGCCAGGCAGCATCAGGCCCACTGGGTTGC...CCGTGGTGGGCGACCTGACCTACGGAGAAGTCTCGGGCCGGGAGGACCGGCCGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565809.5
CDS-3UTR TCA 90 bp TCCCACGGCCGCGGTGCGGTCGTCACCTGTGATCACGGCTGCCTGGCGCCCCCTCTTGGCCATGGCCCCTaGCCAACCCCTGTGCACCAA +
Preference number: 4 (lower is better)
Translates to: SHGRGAVVTCDHGCLAPPLGHGP*PTPVHQ
Trigger: TTGGTGCACAGGGGTTGGTCAGGGGCCATGGCCAAG...AGGGGGCGCCAGGCAGCCGTGATCACAGGTGACGACCGCACCGCGGCCGTGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp CCCGGCCCGAGACTTCTCCGTAGGTCAGGTCGCCCACCACGGGGTGGCCCAGGGCTTGGCCATGGCCCCTaGCCAACCCCTGTGCACCAA +
Preference number: 4 (lower is better)
Translates to: PGPRLLRRSGRPPRGGPGLGHGP*PTPVHQ
Trigger: TTGGTGCACAGGGGTTGGTCAGGGGCCATGGCCAAG...CCCTGGGCCACCCCGTGGTGGGCGACCTGACCTACGGAGAAGTCTCGGGCCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000565809.5
CDS-3UTR GCA 90 bp CAGAGCAGTGAGGGGCAGAGGACGCAGGGACCAGATGGGTCTCCCAGGCCAGGTCCTGCTGCCGGGCCGTaGAGTCCAGGCCCCCGATGC +
Preference number: 4 (lower is better)
Translates to: QSSEGQRTQGPDGSPRPGPAAGP*SPGPRC
Trigger: GCATCGGGGGCCTGGACTGCACGGCCCGGCAGCAGG...ACCTGGCCTGGGAGACCCATCTGGTCCCTGCGTCCTCTGCCCCTCACTGCTCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp CCTCCCGGCCCGAGACTTCTCCGTAGGTCAGGTCGCCCACCACGGGGTGGCCCAACAGGTTCTCCACGCTaGCTGGCTCCATGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: PPGPRLLRRSGRPPRGGPTGSPR*LAPWPA
Trigger: GGCCGGCCATGGAGCCAGGCAGCGTGGAGAACCTGT...TGGGCCACCCCGTGGTGGGCGACCTGACCTACGGAGAAGTCTCGGGCCGGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565809.5
ENST00000567283.5
CDS-3UTR GCA 90 bp GGCCGCGGTGCGGTCGTCACCTGTGATCACGGCTGCCTGGCGCCCCCTGCCGGCAAGCGGTACCGCAGCTaGTTCTGCAGGGTCAGAGTC +
Preference number: 4 (lower is better)
Translates to: GRGAVVTCDHGCLAPPAGKRYRS*FCRVRV
Trigger: GACTCTGACCCTGCAGAAGCAGCTGCGGTACCGCTT...GCCGGCAGGGGGCGCCAGGCAGCCGTGATCACAGGTGACGACCGCACCGCGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
CDS-3UTR GCA 90 bp GGCCGCGGTGCGGTCGTCACCTGTGATCACGGCTGCCTGGCGCCCCCTGCCGGCGGGTTCTCACAACCCTaGGAGCCCTCGATGCACATG +
Preference number: 4 (lower is better)
Translates to: GRGAVVTCDHGCLAPPAGGFSQP*EPSMHM
Trigger: CATGTGCATCGAGGGCTCGCAGGGTTGTGAGAACCC...GCCGGCAGGGGGCGCCAGGCAGCCGTGATCACAGGTGACGACCGCACCGCGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000567114.5
CDS-3UTR GCA 90 bp AGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTGCGGTCGTCACCTGTGCCCAGGGCACTGCAGTaGACGCGCAGCTGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: RPSGSRISPTAAVRSSPVPRALQ*TRSWCV
Trigger: GACACACCAGCTGCGCGTGCACTGCAGTGCCCTGGG...CACAGGTGACGACCGCACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp ATGTGGGCAGGAAGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTGCGGGTGGCCCGTAAGGCCTaGACGAGCTGGTCCAGCGAC +
Preference number: 4 (lower is better)
Translates to: MWAGRPSGSRISPTAAVRVARKA*TSWSSD
Trigger: GTCGCTGGACCAGCTCGTGCAGGCCTTACGGGCCAC...CCGCACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCTTCCTGCCCACAT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp TCCCACGGCCGCGGTGCGGTCGTCACCTGTGATCACGGCTGCCTGGCGCCCCCTGTGACGTGGCAGAGCTaGCAGCAGGGGCCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: SHGRGAVVTCDHGCLAPPVTWQS*QQGPKR
Trigger: TCTCTTGGGCCCCTGCTGGCAGCTCTGCCACGTCAC...AGGGGGCGCCAGGCAGCCGTGATCACAGGTGACGACCGCACCGCGGCCGTGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp GACTTCTCCGTAGGTCAGGTCGCCCACCACGGGGTGGCCCAGGGCACTGCAGTGCTGGTGTGTCCGGCCTaGGGGATGAGGGCGGTGCCG +
Preference number: 4 (lower is better)
Translates to: DFSVGQVAHHGVAQGTAVLVCPA*GMRAVP
Trigger: CGGCACCGCCCTCATCCCGCAGGCCGGACACACCAG...CACTGCAGTGCCCTGGGCCACCCCGTGGTGGGCGACCTGACCTACGGAGAAGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562070.1
CDS-3UTR CCA 90 bp ATGTGGGCAGGAAGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTGCGGTCGATGCACATGGTGTaGGCCCGGCCCTCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: MWAGRPSGSRISPTAAVRSMHMV*ARPSVL
Trigger: CAGCACGGAGGGCCGGGCCCACACCATGTGCATCGA...CCGCACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCTTCCTGCCCACAT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000567114.5
CDS-3UTR CCA 90 bp TCCGTAGGTCAGGTCGCCCACCACGGGGTGGCCCAGGGCACTGCAGTGCACGCGTCGATGCACATGGTGTaGGCCCGGCCCTCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: SVGQVAHHGVAQGTAVHASMHMV*ARPSVL
Trigger: CAGCACGGAGGGCCGGGCCCACACCATGTGCATCGA...CGCGTGCACTGCAGTGCCCTGGGCCACCCCGTGGTGGGCGACCTGACCTACGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562070.1
ENST00000567283.5
CDS-3UTR CCA 90 bp TGTTCCAGGAGGAGGGAGGGGCCTCGGTTTCTCCCGGGGCATGTGGGCAGGAAGGTGATCACGGCTGCCTaGCGCCCCCTGCCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: CSRRREGPRFLPGHVGRKVITAA*RPLPAP
Trigger: TGGGGCCGGCAGGGGGCGCCAGGCAGCCGTGATCAC...CTTCCTGCCCACATGCCCCGGGAGAAACCGAGGCCCCTCCCTCCTCCTGGAACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp TCCGGGCAGAGAGGGAACCACTGGTACAGTGAGGCCAAGGCACACGCAGCCGGGGTGATCACGGCTGCCTaGCGCCCCCTGCCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: SGQRGNHWYSEAKAHAAGVITAA*RPLPAP
Trigger: TGGGGCCGGCAGGGGGCGCCAGGCAGCCGTGATCAC...CCCGGCTGCGTGTGCCTTGGCCTCACTGTACCAGTGGTTCCCTCTCTGCCCGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp AGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTGCGGTCGTCACCTGTGGCAGGGCCTTGGCCATaGCCCCTGACCAACCCCTGT +
Preference number: 4 (lower is better)
Translates to: RPSGSRISPTAAVRSSPVAGPWP*PLTNPC
Trigger: ACAGGGGTTGGTCAGGGGCCATGGCCAAGGCCCTGC...CACAGGTGACGACCGCACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp ACGGCCGGTCCTCCCGGCCCGAGACTTCTCCGTAGGTCAGGTCGCCCACCACGGTGCGTGGCAGGGCCTTaGCCATGGCCCCTGACCAAC +
Preference number: 4 (lower is better)
Translates to: TAGPPGPRLLRRSGRPPRCVAGP*PWPLTN
Trigger: GTTGGTCAGGGGCCATGGCCAAGGCCCTGCCACGCA...CCGTGGTGGGCGACCTGACCTACGGAGAAGTCTCGGGCCGGGAGGACCGGCCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565809.5
CDS-3UTR CCA 90 bp GAAGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTGCGGTCGTCACCTGTGCGTGGCAGGGCCTTaGCCATGGCCCCTGACCAAC +
Preference number: 4 (lower is better)
Translates to: EGPRDPASVPRPRCGRHLCVAGP*PWPLTN
Trigger: GTTGGTCAGGGGCCATGGCCAAGGCCCTGCCACGCA...CAGGTGACGACCGCACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp TCCCACGGCCGCGGTGCGGTCGTCACCTGTGATCACGGCTGCCTGGCGCCCCCTAGTGGATCTGAGGGATaGGCGTGCGTGGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: SHGRGAVVTCDHGCLAPPSGSEG*ACVAGP
Trigger: AGGCCCTGCCACGCACGCCCATCCCTCAGATCCACT...AGGGGGCGCCAGGCAGCCGTGATCACAGGTGACGACCGCACCGCGGCCGTGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp TGTTCCAGGAGGAGGGAGGGGCCTCGGTTTCTCCCGGGGCATGTGGGCAGGAAGCGCTGCCTGGCTCCATaGCCGGCCTGCCGAGCCACG +
Preference number: 4 (lower is better)
Translates to: CSRRREGPRFLPGHVGRKRCLAP*PACRAT
Trigger: CGTGGCTCGGCAGGCCGGCCATGGAGCCAGGCAGCG...CTTCCTGCCCACATGCCCCGGGAGAAACCGAGGCCCCTCCCTCCTCCTGGAACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561734.5
CDS-3UTR CCA 90 bp CACACGCAGCCGGGCCTGCAGACTCGAGCCCAGCAGGGACCATTAGGTCTCGGGTCCGCTCCGGACGCCTaGCAGCGCTTCCGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: HTQPGLQTRAQQGPLGLGSAPDA*QRFRPA
Trigger: TGCAGGGCGGAAGCGCTGCCAGGCGTCCGGAGCGGA...CCCGAGACCTAATGGTCCCTGCTGGGCTCGAGTCTGCAGGCCCGGCTGCGTGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567114.5
CDS-3UTR TCA 90 bp GGCCCGAGACTTCTCCGTAGGTCAGGTCGCCCACCACGGGGTGGCCCAGGGCACCGTCCCAGTGCTTGTTaGCCACCAGGAAGTCGCGGC +
Preference number: 4 (lower is better)
Translates to: GPRLLRRSGRPPRGGPGHRPSAC*PPGSRG
Trigger: GCCGCGACTTCCTGGTGGTCAACAAGCACTGGGACG...GTGCCCTGGGCCACCCCGTGGTGGGCGACCTGACCTACGGAGAAGTCTCGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565809.5
ENST00000567283.5
CDS-3UTR TCA 90 bp GGTCCTCCCGGCCCGAGACTTCTCCGTAGGTCAGGTCGCCCACCACGGGGTGGCCGTCCCAGTGCTTGTTaGCCACCAGGAAGTCGCGGC +
Preference number: 4 (lower is better)
Translates to: GPPGPRLLRRSGRPPRGGRPSAC*PPGSRG
Trigger: GCCGCGACTTCCTGGTGGTCAACAAGCACTGGGACG...GCCACCCCGTGGTGGGCGACCTGACCTACGGAGAAGTCTCGGGCCGGGAGGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565809.5
ENST00000567283.5
CDS-3UTR TCA 90 bp GCTCGCTCGCCCATCTCCCTAGAGTCCCGCTGTGCAGCTGACACCCCCTGCCCCGGTGTGTCCGGCCCGTaGGCGGCTTCAGCAGCACTT +
Preference number: 4 (lower is better)
Translates to: ARSPISLESRCAADTPCPGVSGP*AASAAL
Trigger: AAGTGCTGCTGAAGCCGCTCACGGGCCGGACACACC...GGGGCAGGGGGTGTCAGCTGCACAGCGGGACTCTAGGGAGATGGGCGAGCGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp GAGCCGGAAGCTGTTCCAGGAGGAGGGAGGGGCCTCGGTTTCTCCCGGGGCATGTGCGGTCGTCACCTGTaGTCACGGCTGCCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: EPEAVPGGGRGLGFSRGMCGRHL*SRLPGA
Trigger: GGCGCCAGGCAGCCGTGATCACAGGTGACGACCGCA...CATGCCCCGGGAGAAACCGAGGCCCCTCCCTCCTCCTGGAACAGCTTCCGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp GGGCATGTGGGCAGGAAGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTATCTGCACAGAGCAGTaGGGGGCAGAGGACGCAGGG +
Preference number: 4 (lower is better)
Translates to: GHVGRKALGIPHQSHGRGICTEQ*GAEDAG
Trigger: CCCTGCGTCCTCTGCCCCTCACTGCTCTGTGCAGAT...ACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCTTCCTGCCCACATGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp TCCCACGGCCGCGGTGCGGTCGTCACCTGTGATCACGGCTGCCTGGCGCCCCCTGAACCACTGGTACAGTaGGGCCAAGGCACACGCAGC +
Preference number: 4 (lower is better)
Translates to: SHGRGAVVTCDHGCLAPPEPLVQ*GQGTRS
Trigger: GCTGCGTGTGCCTTGGCCTCACTGTACCAGTGGTTC...AGGGGGCGCCAGGCAGCCGTGATCACAGGTGACGACCGCACCGCGGCCGTGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp GGCCGCGGTGCGGTCGTCACCTGTGATCACGGCTGCCTGGCGCCCCCTGCCGGCCACCAAACACCACACTaGGCTCAGAATCCGGGCAGA +
Preference number: 4 (lower is better)
Translates to: GRGAVVTCDHGCLAPPAGHQTPH*AQNPGR
Trigger: TCTGCCCGGATTCTGAGCTCAGTGTGGTGTTTGGTG...GCCGGCAGGGGGCGCCAGGCAGCCGTGATCACAGGTGACGACCGCACCGCGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp TGTCCGGCCTGCGGGATGAGGGCGGTGCCGGATCAAGCTGGGAGCGGGGCCGATCCCCAGACACACCCGTaGGCGGCTTCAGCAGCACTT +
Preference number: 4 (lower is better)
Translates to: CPACGMRAVPDQAGSGADPQTHP*AASAAL
Trigger: AAGTGCTGCTGAAGCCGCTCACGGGTGTGTCTGGGG...ATCGGCCCCGCTCCCAGCTTGATCCGGCACCGCCCTCATCCCGCAGGCCGGACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562070.1
CDS-3UTR TCA 90 bp CTCCGTAGGTCAGGTCGCCCACCACGGGGTGGCCCAGGGCACTGCAGTGCACGCACCCCGCTGCAGTCTTaGAGCAGCCTCTTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LRRSGRPPRGGPGHCSARTPLQS*SSLLGW
Trigger: CCACCCCAAGAGGCTGCTTCAAGACTGCAGCGGGGT...GCGTGCACTGCAGTGCCCTGGGCCACCCCGTGGTGGGCGACCTGACCTACGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562070.1
CDS-3UTR GCA 90 bp ACGTGGCAGAGCTGCCAGCAGGGGCCCAAGAGACTGCAGCAGGTTGGTGCTCACCCTGCTGCCGGGCCGTaGAGTCCAGGCCCCCGATGC +
Preference number: 4 (lower is better)
Translates to: TWQSCQQGPKRLQQVGAHPAAGP*SPGPRC
Trigger: GCATCGGGGGCCTGGACTGCACGGCCCGGCAGCAGG...GTGAGCACCAACCTGCTGCAGTCTCTTGGGCCCCTGCTGGCAGCTCTGCCACGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp CACATGGTGTGGGCCCGGCCCTCCGTGCTGTTCCTGCCAATGGCATGGCTGATGCCTGCTGCCGGGCCGTaGAGTCCAGGCCCCCGATGC +
Preference number: 4 (lower is better)
Translates to: HMVWARPSVLFLPMAWLMPAAGP*SPGPRC
Trigger: GCATCGGGGGCCTGGACTGCACGGCCCGGCAGCAGG...CATCAGCCATGCCATTGGCAGGAACAGCACGGAGGGCCGGGCCCACACCATGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565503.5
CDS-3UTR GCA 90 bp GCGACAGGATCTGCACAGAGCAGTGAGGGGCAGAGGACGCAGGGACCAGATGGGCCATGGCCGGCCTGCTaGCGGGCCGTGCAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: ATGSAQSSEGQRTQGPDGPWPAC*RAVQSR
Trigger: CCTGGACTGCACGGCCCGGCAGCAGGCCGGCCATGG...CCCATCTGGTCCCTGCGTCCTCTGCCCCTCACTGCTCTGTGCAGATCCTGTCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007264.7
ENST00000565809.5
CDS-3UTR GCA 90 bp GTGTCCGGCCTGCGGGATGAGGGCGGTGCCGGATCAAGCTGGGAGCGGGGCCGAAGCACCTGTACGCGCTaGCGGCGGCTGCCTTGTTTA +
Preference number: 4 (lower is better)
Translates to: VSGLRDEGGAGSSWERGRSTCTR*RRLPCL
Trigger: TAAACAAGGCAGCCGCCGGCAGCGCGTACAGGTGCT...TCGGCCCCGCTCCCAGCTTGATCCGGCACCGCCCTCATCCCGCAGGCCGGACAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562070.1
CDS-3UTR GCA 90 bp GCTCGCTCGCCCATCTCCCTAGAGTCCCGCTGTGCAGCTGACACCCCCTGCCCCCGGCTCTCCTGGATGTaGCCCCGCAGCAATGCCAGG +
Preference number: 4 (lower is better)
Translates to: ARSPISLESRCAADTPCPRLSWM*PRSNAR
Trigger: CCTGGCATTGCTGCGGGGGCACATCCAGGAGAGCCG...GGGGCAGGGGGTGTCAGCTGCACAGCGGGACTCTAGGGAGATGGGCGAGCGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000567114.5
CDS-3UTR GCA 90 bp GCTGTTCCAGGAGGAGGGAGGGGCCTCGGTTTCTCCCGGGGCATGTGGGCAGGAGGTGGCCCAGGGCACTaGAGTGCACGCGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: AVPGGGRGLGFSRGMWAGGGPGH*SARAAG
Trigger: ACCAGCTGCGCGTGCACTGCAGTGCCCTGGGCCACC...TCCTGCCCACATGCCCCGGGAGAAACCGAGGCCCCTCCCTCCTCCTGGAACAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp GAAGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTGCGGTCGTCACCTGGGAAGGGGTCAGGCGTaGAGACCTCCACACACTCGG +
Preference number: 4 (lower is better)
Translates to: EGPRDPASVPRPRCGRHLGRGQA*RPPHTR
Trigger: CCGAGTGTGTGGAGGTCTGCACGCCTGACCCCTTCC...CAGGTGACGACCGCACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp GGCCCGAGACTTCTCCGTAGGTCAGGTCGCCCACCACGGGGTGGCCCAGGGCACGGAAGGGGTCAGGCGTaGAGACCTCCACACACTCGG +
Preference number: 4 (lower is better)
Translates to: GPRLLRRSGRPPRGGPGHGRGQA*RPPHTR
Trigger: CCGAGTGTGTGGAGGTCTGCACGCCTGACCCCTTCC...GTGCCCTGGGCCACCCCGTGGTGGGCGACCTGACCTACGGAGAAGTCTCGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562070.1
ENST00000565809.5
ENST00000567283.5
CDS-3UTR GCA 90 bp GGGAGGGCAGGAAGGGGTCAGGCGTGCAGACCTCCACACACTCGGTGTCCGTGGCACTCCGACAGCCACTaGAGGCAGGGGCCCCGCTGT +
Preference number: 4 (lower is better)
Translates to: GRAGRGQACRPPHTRCPWHSDSH*RQGPRC
Trigger: ACAGCGGGGCCCCTGCCTGCAGTGGCTGTCGGAGTG...CCACGGACACCGAGTGTGTGGAGGTCTGCACGCCTGACCCCTTCCTGCCCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000565809.5
CDS-3UTR GCA 90 bp TGTTCCAGGAGGAGGGAGGGGCCTCGGTTTCTCCCGGGGCATGTGGGCAGGAAGACCTGTGATCACGGCTaGCTGGCGCCCCCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: CSRRREGPRFLPGHVGRKTCDHG*LAPPAG
Trigger: GCCGGCAGGGGGCGCCAGGCAGCCGTGATCACAGGT...CTTCCTGCCCACATGCCCCGGGAGAAACCGAGGCCCCTCCCTCCTCCTGGAACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp CCAGGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCACCTGTGATCACGGCTaGCTGGCGCCCCCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: PGCGMGDRGGGTWQTHSSTCDHG*LAPPAG
Trigger: GCCGGCAGGGGGCGCCAGGCAGCCGTGATCACAGGT...GGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp GCACACGCAGCCGGGCCTGCAGACTCGAGCCCAGCAGGGACCATTAGGTCTCGGACACGCAGCCGGGCCTaGAGACTCGAGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: AHAAGPADSSPAGTIRSRTRSRA*RLEPSR
Trigger: CCTGCTGGGCTCGAGTCTGCAGGCCCGGCTGCGTGT...CCGAGACCTAATGGTCCCTGCTGGGCTCGAGTCTGCAGGCCCGGCTGCGTGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp GGGCATGTGGGCAGGAAGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTACAGCGCCCCGCTGGTaGAGAAATCCAGCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: GHVGRKALGIPHQSHGRGTAPRW*RNPAGG
Trigger: GCCACCAGCTGGATTTCTCCACCAGCGGGGCGCTGT...ACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCTTCCTGCCCACATGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp GCAGACGCTCGCTCGCCCATCTCCCTAGAGTCCCGCTGTGCAGCTGACACCCCCAGCCCTCGATGCACATaGTGTGGGCCCGGCCCTCCG +
Preference number: 4 (lower is better)
Translates to: ADARSPISLESRCAADTPSPRCT*CGPGPP
Trigger: CGGAGGGCCGGGCCCACACCATGTGCATCGAGGGCT...GGGGGTGTCAGCTGCACAGCGGGACTCTAGGGAGATGGGCGAGCGAGCGTCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000567114.5
CDS-3UTR CCA 90 bp GCTGTTCCAGGAGGAGGGAGGGGCCTCGGTTTCTCCCGGGGCATGTGGGCAGGAAGCCCTCGATGCACATaGTGTGGGCCCGGCCCTCCG +
Preference number: 4 (lower is better)
Translates to: AVPGGGRGLGFSRGMWAGSPRCT*CGPGPP
Trigger: CGGAGGGCCGGGCCCACACCATGTGCATCGAGGGCT...TCCTGCCCACATGCCCCGGGAGAAACCGAGGCCCCTCCCTCCTCCTGGAACAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000567114.5
CDS-3UTR CCA 90 bp GCAGCCGGGCCTGCAGACTCGAGCCCAGCAGGGACCATTAGGTCTCGGGAGGAGCAGTGCACGCGCAGCTaGTGTGTCCGGCCCGTGAGC +
Preference number: 4 (lower is better)
Translates to: AAGPADSSPAGTIRSREEQCTRS*CVRPVS
Trigger: GCTCACGGGCCGGACACACCAGCTGCGCGTGCACTG...CTCCTCCCGAGACCTAATGGTCCCTGCTGGGCTCGAGTCTGCAGGCCCGGCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp GGACGCAGGGACCAGATGGGTCTCCCAGGCCAGGTGAGCCCAGAACGGCCCTTCCAGTGCACGCGCAGCTaGTGTGTCCGGCCCGTGAGC +
Preference number: 4 (lower is better)
Translates to: GRRDQMGLPGQVSPERPFQCTRS*CVRPVS
Trigger: GCTCACGGGCCGGACACACCAGCTGCGCGTGCACTG...GAAGGGCCGTTCTGGGCTCACCTGGCCTGGGAGACCCATCTGGTCCCTGCGTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp TGTTCCAGGAGGAGGGAGGGGCCTCGGTTTCTCCCGGGGCATGTGGGCAGGAAGTCGCCCACCACGGGGTaGCCCAGGGCACTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: CSRRREGPRFLPGHVGRKSPTTG*PRALQC
Trigger: GCACTGCAGTGCCCTGGGCCACCCCGTGGTGGGCGA...CTTCCTGCCCACATGCCCCGGGAGAAACCGAGGCCCCTCCCTCCTCCTGGAACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp CCAGGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCTCGCCCACCACGGGGTaGCCCAGGGCACTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: PGCGMGDRGGGTWQTHSSSPTTG*PRALQC
Trigger: GCACTGCAGTGCCCTGGGCCACCCCGTGGTGGGCGA...GGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp CACACGCAGCCGGGCCTGCAGACTCGAGCCCAGCAGGGACCATTAGGTCTCGGGGGTCAGGGTCGGGGGTaGCCCGTAAGGCCTGCACGA +
Preference number: 4 (lower is better)
Translates to: HTQPGLQTRAQQGPLGLGGQGRG*PVRPAR
Trigger: TCGTGCAGGCCTTACGGGCCACCCCCGACCCTGACC...CCCGAGACCTAATGGTCCCTGCTGGGCTCGAGTCTGCAGGCCCGGCTGCGTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp CCAAGGCACACGCAGCCGGGCCTGCAGACTCGAGCCCAGCAGGGACCATTAGGTCCTTCCTCGCAGGCCTaGCCGGGGCAACCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: PRHTQPGLQTRAQQGPLGPSSQA*PGQPSG
Trigger: CCCACTGGGTTGCCCCGGCCAGGCCTGCGAGGAAGG...ACCTAATGGTCCCTGCTGGGCTCGAGTCTGCAGGCCCGGCTGCGTGTGCCTTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp GTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCCAAGGTGATCACGGCTGCCTaGCGCCCCCTGCCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: VVAWGTEEVGPGRPTAPKVITAA*RPLPAP
Trigger: TGGGGCCGGCAGGGGGCGCCAGGCAGCCGTGATCAC...CTTGGGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp GGACGCAGGGACCAGATGGGTCTCCCAGGCCAGGTGAGCCCAGAACGGCCCTTCAGGCAGGCGGTGACGTaGCAGAGCTGCCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GRRDQMGLPGQVSPERPFRQAVT*QSCQQG
Trigger: CCCCTGCTGGCAGCTCTGCCACGTCACCGCCTGCCT...GAAGGGCCGTTCTGGGCTCACCTGGCCTGGGAGACCCATCTGGTCCCTGCGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp GACTTCTCCGTAGGTCAGGTCGCCCACCACGGGGTGGCCCAGGGCACTGCAGTGAGGCAGGCGGTGACGTaGCAGAGCTGCCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: DFSVGQVAHHGVAQGTAVRQAVT*QSCQQG
Trigger: CCCCTGCTGGCAGCTCTGCCACGTCACCGCCTGCCT...CACTGCAGTGCCCTGGGCCACCCCGTGGTGGGCGACCTGACCTACGGAGAAGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565809.5
CDS-3UTR CCA 90 bp GTGTGTCCGGCCTGCGGGATGAGGGCGGTGCCGGATCAAGCTGGGAGCGGGGCCAGCAGCCTCTTGGGGTaGAACTCTCCCTGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: VCPACGMRAVPDQAGSGASSLLG*NSPCPL
Trigger: CAGGGGACAGGGAGAGTTCCACCCCAAGAGGCTGCT...GGCCCCGCTCCCAGCTTGATCCGGCACCGCCCTCATCCCGCAGGCCGGACACAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562070.1
CDS-3UTR TCA 90 bp GGGCATGTGGGCAGGAAGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTGCTGGTGGCAGAACCTaGACCCGTAGCAGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: GHVGRKALGIPHQSHGRGAGGRT*TRSRCQ
Trigger: CTGACACCTGCTACGGGTTCAGGTTCTGCCACCAGC...ACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCTTCCTGCCCACATGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
CDS-3UTR TCA 90 bp CTCCGTAGGTCAGGTCGCCCACCACGGGGTGGCCCAGGGCACTGCAGTGCACGCGCTGGTGGCAGAACCTaGACCCGTAGCAGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: LRRSGRPPRGGPGHCSARAGGRT*TRSRCQ
Trigger: CTGACACCTGCTACGGGTTCAGGTTCTGCCACCAGC...GCGTGCACTGCAGTGCCCTGGGCCACCCCGTGGTGGGCGACCTGACCTACGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565809.5
ENST00000567283.5
CDS-3UTR TCA 90 bp GCTGTTCCAGGAGGAGGGAGGGGCCTCGGTTTCTCCCGGGGCATGTGGGCAGGATCACGCGCCGCTCCTTaGAGCACCTGTACGCGCTGC +
Preference number: 4 (lower is better)
Translates to: AVPGGGRGLGFSRGMWAGSRAAP*STCTRC
Trigger: GCAGCGCGTACAGGTGCTTCAAGGAGCGGCGCGTGA...TCCTGCCCACATGCCCCGGGAGAAACCGAGGCCCCTCCCTCCTCCTGGAACAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp ACGTGGCAGAGCTGCCAGCAGGGGCCCAAGAGACTGCAGCAGGTTGGTGCTCACAGGCCCCAGAGCCAGTaGGCAGACGCTCGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: TWQSCQQGPKRLQQVGAHRPQSQ*ADARSP
Trigger: GGGCGAGCGAGCGTCTGCTCACTGGCTCTGGGGCCT...GTGAGCACCAACCTGCTGCAGTCTCTTGGGCCCCTGCTGGCAGCTCTGCCACGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp TGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCCAAGCTAGGCCCCAGAGCCAGTaGGCAGACGCTCGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: CGMGDRGGGTWQTHSSQARPQSQ*ADARSP
Trigger: GGGCGAGCGAGCGTCTGCTCACTGGCTCTGGGGCCT...AGCTTGGGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp AGGGGCAGAGGACGCAGGGACCAGATGGGTCTCCCAGGCCAGGTGAGCCCAGAATGCGGTCGTCACCTGTaGTCACGGCTGCCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: RGRGRRDQMGLPGQVSPECGRHL*SRLPGA
Trigger: GGCGCCAGGCAGCCGTGATCACAGGTGACGACCGCA...TTCTGGGCTCACCTGGCCTGGGAGACCCATCTGGTCCCTGCGTCCTCTGCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp ATGTGGGCAGGAAGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTGCGGGAACCACTGGTACAGTaGGGCCAAGGCACACGCAGC +
Preference number: 4 (lower is better)
Translates to: MWAGRPSGSRISPTAAVREPLVQ*GQGTRS
Trigger: GCTGCGTGTGCCTTGGCCTCACTGTACCAGTGGTTC...CCGCACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCTTCCTGCCCACAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp AGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTGCGGTCGTCACCTGTGGTCCCGGAGGCAGAGTaGCAATGCATGGCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: RPSGSRISPTAAVRSSPVVPEAE*QCMAVW
Trigger: CCACACAGCCATGCATTGTCACTCTGCCTCCGGGAC...CACAGGTGACGACCGCACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp CACACGCAGCCGGGCCTGCAGACTCGAGCCCAGCAGGGACCATTAGGTCTCGGGTGCTCCGGGCTGACCTaGAGGGCCCTGCCTGACCTA +
Preference number: 4 (lower is better)
Translates to: HTQPGLQTRAQQGPLGLGCSGLT*RALPDL
Trigger: TAGGTCAGGCAGGGCCCTTCAGGTCAGCCCGGAGCA...CCCGAGACCTAATGGTCCCTGCTGGGCTCGAGTCTGCAGGCCCGGCTGCGTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561734.5
CDS-3UTR TCA 90 bp AGAGCAGTGAGGGGCAGAGGACGCAGGGACCAGATGGGTCTCCCAGGCCAGGTGTGGGTGCGTGTGCTGTaGGCACGTGGTGCGCCCCCA +
Preference number: 4 (lower is better)
Translates to: RAVRGRGRRDQMGLPGQVWVRVL*ARGAPP
Trigger: TGGGGGCGCACCACGTGCTCACAGCACACGCACCCA...CACCTGGCCTGGGAGACCCATCTGGTCCCTGCGTCCTCTGCCCCTCACTGCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561734.5
CDS-3UTR TCA 90 bp GGTCCTCCCGGCCCGAGACTTCTCCGTAGGTCAGGTCGCCCACCACGGGGTGGCTGTCAGGTGAGAAGCTaGGAGGCTGCAGGGCGTGGA +
Preference number: 4 (lower is better)
Translates to: GPPGPRLLRRSGRPPRGGCQVRS*EAAGRG
Trigger: TCCACGCCCTGCAGCCTCTCAGCTTCTCACCTGACA...GCCACCCCGTGGTGGGCGACCTGACCTACGGAGAAGTCTCGGGCCGGGAGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562070.1
CDS-3UTR TCA 90 bp GCCGGTCCTCCCGGCCCGAGACTTCTCCGTAGGTCAGGTCGCCCACCACGGGGTACCCACCTCCCGTCATaGCCCCGCTGCAGTCTTGAA +
Preference number: 4 (lower is better)
Translates to: AGPPGPRLLRRSGRPPRGTHLPS*PRCSLE
Trigger: TTCAAGACTGCAGCGGGGTCATGACGGGAGGTGGGT...ACCCCGTGGTGGGCGACCTGACCTACGGAGAAGTCTCGGGCCGGGAGGACCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562070.1
CDS-3UTR GCA 90 bp AAAGCGTGCAGCATCATTCTGAACGGCCGGTCCTCCCGGCCCGAGACTTCTCCGCCTGCTGCCGGGCCGTaGAGTCCAGGCCCCCGATGC +
Preference number: 4 (lower is better)
Translates to: KACSIILNGRSSRPETSPPAAGP*SPGPRC
Trigger: GCATCGGGGGCCTGGACTGCACGGCCCGGCAGCAGG...CGGAGAAGTCTCGGGCCGGGAGGACCGGCCGTTCAGAATGATGCTGCACGCTTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565809.5
ENST00000567283.5
CDS-3UTR GCA 90 bp GCTGTTCCAGGAGGAGGGAGGGGCCTCGGTTTCTCCCGGGGCATGTGGGCAGGAACAGGTTCTCCACGCTaGCTGGCTCCATGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: AVPGGGRGLGFSRGMWAGTGSPR*LAPWPA
Trigger: GGCCGGCCATGGAGCCAGGCAGCGTGGAGAACCTGT...TCCTGCCCACATGCCCCGGGAGAAACCGAGGCCCCTCCCTCCTCCTGGAACAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
CDS-3UTR GCA 90 bp CGAGACTTCTCCGTAGGTCAGGTCGCCCACCACGGGGTGGCCCAGGGCACTGCAACAGGTTCTCCACGCTaGCTGGCTCCATGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: RDFSVGQVAHHGVAQGTATGSPR*LAPWPA
Trigger: GGCCGGCCATGGAGCCAGGCAGCGTGGAGAACCTGT...TGCAGTGCCCTGGGCCACCCCGTGGTGGGCGACCTGACCTACGGAGAAGTCTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565809.5
ENST00000567283.5
CDS-3UTR GCA 90 bp ATGTGGGCAGGAAGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTGCGGTACCGCAGCTGCTTCTaGAGGGTCAGAGTCTCCCGC +
Preference number: 4 (lower is better)
Translates to: MWAGRPSGSRISPTAAVRYRSCF*RVRVSR
Trigger: GCGGGAGACTCTGACCCTGCAGAAGCAGCTGCGGTA...CCGCACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCTTCCTGCCCACAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
CDS-3UTR GCA 90 bp GGGCATGTGGGCAGGAAGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTGTGCCCCCGCAGCAATaGCAGGTAAGCCTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: GHVGRKALGIPHQSHGRGVPPQQ*QVSLGH
Trigger: GTGACCAAGGCTTACCTGGCATTGCTGCGGGGGCAC...ACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCTTCCTGCCCACATGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000567114.5
CDS-3UTR GCA 90 bp ATGTGGGCAGGAAGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTGCGGGTGCCCCCGCAGCAATaGCAGGTAAGCCTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: MWAGRPSGSRISPTAAVRVPPQQ*QVSLGH
Trigger: GTGACCAAGGCTTACCTGGCATTGCTGCGGGGGCAC...CCGCACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCTTCCTGCCCACAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000567114.5
CDS-3UTR GCA 90 bp GGGCGGTGCCGGATCAAGCTGGGAGCGGGGCCGATCCACACCTATCTCCCTGACCGGCTCTCCTGGATGTaGCCCCGCAGCAATGCCAGG +
Preference number: 4 (lower is better)
Translates to: GRCRIKLGAGPIHTYLPDRLSWM*PRSNAR
Trigger: CCTGGCATTGCTGCGGGGGCACATCCAGGAGAGCCG...GTCAGGGAGATAGGTGTGGATCGGCCCCGCTCCCAGCTTGATCCGGCACCGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562070.1
CDS-3UTR GCA 90 bp GTGTGTCCGGCCTGCGGGATGAGGGCGGTGCCGGATCAAGCTGGGAGCGGGGCCGGGTTCTCACAACCCTaGGAGCCCTCGATGCACATG +
Preference number: 4 (lower is better)
Translates to: VCPACGMRAVPDQAGSGAGFSQP*EPSMHM
Trigger: CATGTGCATCGAGGGCTCGCAGGGTTGTGAGAACCC...GGCCCCGCTCCCAGCTTGATCCGGCACCGCCCTCATCCCGCAGGCCGGACACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562070.1
CDS-3UTR GCA 90 bp GCAGACGCTCGCTCGCCCATCTCCCTAGAGTCCCGCTGTGCAGCTGACACCCCCCCCAGGGCACTGCAGTaGACGCGCAGCTGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: ADARSPISLESRCAADTPPRALQ*TRSWCV
Trigger: GACACACCAGCTGCGCGTGCACTGCAGTGCCCTGGG...GGGGGTGTCAGCTGCACAGCGGGACTCTAGGGAGATGGGCGAGCGAGCGTCTGC
68% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp CCAGGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCGGTGGCCCAGGGCACTaGAGTGCACGCGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: PGCGMGDRGGGTWQTHSSGGPGH*SARAAG
Trigger: ACCAGCTGCGCGTGCACTGCAGTGCCCTGGGCCACC...GGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp GCTCGCTCGCCCATCTCCCTAGAGTCCCGCTGTGCAGCTGACACCCCCTGCCCCAGCTGGTCCAGCGACTaGAGCAGTGTGTGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: ARSPISLESRCAADTPCPSWSSD*SSVWGL
Trigger: GAGCCCCCACACACTGCTGCAGTCGCTGGACCAGCT...GGGGCAGGGGGTGTCAGCTGCACAGCGGGACTCTAGGGAGATGGGCGAGCGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp GCAGCCGGGCCTGCAGACTCGAGCCCAGCAGGGACCATTAGGTCTCGGGAGGAGGTGGCCCGTAAGGCCTaGACGAGCTGGTCCAGCGAC +
Preference number: 4 (lower is better)
Translates to: AAGPADSSPAGTIRSREEVARKA*TSWSSD
Trigger: GTCGCTGGACCAGCTCGTGCAGGCCTTACGGGCCAC...CTCCTCCCGAGACCTAATGGTCCCTGCTGGGCTCGAGTCTGCAGGCCCGGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp TCCGGGCAGAGAGGGAACCACTGGTACAGTGAGGCCAAGGCACACGCAGCCGGGCACTCCGACAGCCACTaGAGGCAGGGGCCCCGCTGT +
Preference number: 4 (lower is better)
Translates to: SGQRGNHWYSEAKAHAAGHSDSH*RQGPRC
Trigger: ACAGCGGGGCCCCTGCCTGCAGTGGCTGTCGGAGTG...CCCGGCTGCGTGTGCCTTGGCCTCACTGTACCAGTGGTTCCCTCTCTGCCCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp GCACACGCAGCCGGGCCTGCAGACTCGAGCCCAGCAGGGACCATTAGGTCTCGGACGCGTGGGTGCGTGTaGTGTGAGCACGTGGTGCGC +
Preference number: 4 (lower is better)
Translates to: AHAAGPADSSPAGTIRSRTRGCV*CEHVVR
Trigger: GCGCACCACGTGCTCACAGCACACGCACCCACGCGT...CCGAGACCTAATGGTCCCTGCTGGGCTCGAGTCTGCAGGCCCGGCTGCGTGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561734.5
CDS-3UTR GCA 90 bp TCCGTAGGTCAGGTCGCCCACCACGGGGTGGCCCAGGGCACTGCAGTGCACGCGGCTTGTTGCCAGCTCTaGCCTGATGCTCAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: SVGQVAHHGVAQGTAVHAACCQL*PDAQGG
Trigger: GCCACCCTGAGCATCAGGGCAGAGCTGGCAACAAGC...CGCGTGCACTGCAGTGCCCTGGGCCACCCCGTGGTGGGCGACCTGACCTACGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562070.1
CDS-3UTR CCA 90 bp CCAGGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCGCGACCCAGAGACCCTaGAAGCTCCGCTCCGGACGC +
Preference number: 4 (lower is better)
Translates to: PGCGMGDRGGGTWQTHSSATQRP*KLRSGR
Trigger: GCGTCCGGAGCGGAGCTTCCAGGGTCTCTGGGTCGC...GGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp TCCGTAGGTCAGGTCGCCCACCACGGGGTGGCCCAGGGCACTGCAGTGCACGCGGGCTCCGGTACACGATaGACAGGTTCTCCACGCTGC +
Preference number: 4 (lower is better)
Translates to: SVGQVAHHGVAQGTAVHAGSGTR*TGSPRC
Trigger: GCAGCGTGGAGAACCTGTCCATCGTGTACCGGAGCC...CGCGTGCACTGCAGTGCCCTGGGCCACCCCGTGGTGGGCGACCTGACCTACGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565809.5
ENST00000567283.5
CDS-3UTR CCA 90 bp AGGACGCAGGGACCAGATGGGTCTCCCAGGCCAGGTGAGCCCAGAACGGCCCTTCAGTGCACGCGCAGCTaGTGTGTCCGGCCCGTGAGC +
Preference number: 4 (lower is better)
Translates to: RTQGPDGSPRPGEPRTALQCTRS*CVRPVS
Trigger: GCTCACGGGCCGGACACACCAGCTGCGCGTGCACTG...AAGGGCCGTTCTGGGCTCACCTGGCCTGGGAGACCCATCTGGTCCCTGCGTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp AAGGCACACGCAGCCGGGCCTGCAGACTCGAGCCCAGCAGGGACCATTAGGTCTTCGCCCACCACGGGGTaGCCCAGGGCACTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: KAHAAGPADSSPAGTIRSSPTTG*PRALQC
Trigger: GCACTGCAGTGCCCTGGGCCACCCCGTGGTGGGCGA...AGACCTAATGGTCCCTGCTGGGCTCGAGTCTGCAGGCCCGGCTGCGTGTGCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp CCCGGCCCGAGACTTCTCCGTAGGTCAGGTCGCCCACCACGGGGTGGCCCAGGGCACACTCGGTGTCCGTaGGGATGCGCAGGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: PGPRLLRRSGRPPRGGPGHTRCP*GCAGRK
Trigger: CTTTCTACCTGCGCATCCCCACGGACACCGAGTGTG...CCCTGGGCCACCCCGTGGTGGGCGACCTGACCTACGGAGAAGTCTCGGGCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562070.1
ENST00000565809.5
ENST00000567283.5
CDS-3UTR CCA 90 bp GAAGCTGTTCCAGGAGGAGGGAGGGGCCTCGGTTTCTCCCGGGGCATGTGGGCAGGTCAGGGTCGGGGGTaGCCCGTAAGGCCTGCACGA +
Preference number: 4 (lower is better)
Translates to: EAVPGGGRGLGFSRGMWAGQGRG*PVRPAR
Trigger: TCGTGCAGGCCTTACGGGCCACCCCCGACCCTGACC...TGCCCACATGCCCCGGGAGAAACCGAGGCCCCTCCCTCCTCCTGGAACAGCTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp AAGGCACACGCAGCCGGGCCTGCAGACTCGAGCCCAGCAGGGACCATTAGGTCTCCTTCCTCGCAGGCCTaGCCGGGGCAACCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: KAHAAGPADSSPAGTIRSPSSQA*PGQPSG
Trigger: CCCACTGGGTTGCCCCGGCCAGGCCTGCGAGGAAGG...AGACCTAATGGTCCCTGCTGGGCTCGAGTCTGCAGGCCCGGCTGCGTGTGCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp GCTGTTCCAGGAGGAGGGAGGGGCCTCGGTTTCTCCCGGGGCATGTGGGCAGGAGCAGGGCCTTGGCCATaGCCCCTGACCAACCCCTGT +
Preference number: 4 (lower is better)
Translates to: AVPGGGRGLGFSRGMWAGAGPWP*PLTNPC
Trigger: ACAGGGGTTGGTCAGGGGCCATGGCCAAGGCCCTGC...TCCTGCCCACATGCCCCGGGAGAAACCGAGGCCCCTCCCTCCTCCTGGAACAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp TCCGGGCAGAGAGGGAACCACTGGTACAGTGAGGCCAAGGCACACGCAGCCGGGAGGCAGGCGGTGACGTaGCAGAGCTGCCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: SGQRGNHWYSEAKAHAAGRQAVT*QSCQQG
Trigger: CCCCTGCTGGCAGCTCTGCCACGTCACCGCCTGCCT...CCCGGCTGCGTGTGCCTTGGCCTCACTGTACCAGTGGTTCCCTCTCTGCCCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp GCTGTTCCAGGAGGAGGGAGGGGCCTCGGTTTCTCCCGGGGCATGTGGGCAGGACCCCAGGGCGTCAGCTaGGGAGTCAAGGAGTCAGCC +
Preference number: 4 (lower is better)
Translates to: AVPGGGRGLGFSRGMWAGPQGVS*GVKESA
Trigger: GGCTGACTCCTTGACTCCCCAGCTGACGCCCTGGGG...TCCTGCCCACATGCCCCGGGAGAAACCGAGGCCCCTCCCTCCTCCTGGAACAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561734.5
CDS-3UTR CCA 90 bp GCCCAGGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTGTTCTCCACGCTGCCTaGCTCCATGGCCGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: AQVVAWGTEEVGPGRPTAVLHAA*LHGRPA
Trigger: GGCAGGCCGGCCATGGAGCCAGGCAGCGTGGAGAAC...AGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACCTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561734.5
CDS-3UTR CCA 90 bp GATGAGGGCGGTGCCGGATCAAGCTGGGAGCGGGGCCGATCCACACCTATCTCCCAGTGCACGCGCAGCTaGTGTGTCCGGCCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: DEGGAGSSWERGRSTPISQCTRS*CVRPAG
Trigger: TCCCGCAGGCCGGACACACCAGCTGCGCGTGCACTG...GGAGATAGGTGTGGATCGGCCCCGCTCCCAGCTTGATCCGGCACCGCCCTCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562070.1
CDS-3UTR CCA 90 bp ATGTGGGCAGGAAGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTGCGGGAGAAATCCAGCTGGTaGCAGAACCTGCTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: MWAGRPSGSRISPTAAVREKSSW*QNLLPG
Trigger: GCCCGGCAGCAGGTTCTGCCACCAGCTGGATTTCTC...CCGCACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCTTCCTGCCCACAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567114.5
CDS-3UTR TCA 90 bp AGGACGCAGGGACCAGATGGGTCTCCCAGGCCAGGTGAGCCCAGAACGGCCCTTTCACGCGCCGCTCCTTaGAGCACCTGTACGCGCTGC +
Preference number: 4 (lower is better)
Translates to: RTQGPDGSPRPGEPRTALSRAAP*STCTRC
Trigger: GCAGCGCGTACAGGTGCTTCAAGGAGCGGCGCGTGA...AAGGGCCGTTCTGGGCTCACCTGGCCTGGGAGACCCATCTGGTCCCTGCGTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp GAAGCTGTTCCAGGAGGAGGGAGGGGCCTCGGTTTCTCCCGGGGCATGTGGGCAGGTGTGTCCGGCCCGTaGGCGGCTTCAGCAGCACTT +
Preference number: 4 (lower is better)
Translates to: EAVPGGGRGLGFSRGMWAGVSGP*AASAAL
Trigger: AAGTGCTGCTGAAGCCGCTCACGGGCCGGACACACC...TGCCCACATGCCCCGGGAGAAACCGAGGCCCCTCCCTCCTCCTGGAACAGCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp CAGAGCAGTGAGGGGCAGAGGACGCAGGGACCAGATGGGTCTCCCAGGCCAGGTGGTGTGTCCGGCCCGTaGGCGGCTTCAGCAGCACTT +
Preference number: 4 (lower is better)
Translates to: QSSEGQRTQGPDGSPRPGGVSGP*AASAAL
Trigger: AAGTGCTGCTGAAGCCGCTCACGGGCCGGACACACC...ACCTGGCCTGGGAGACCCATCTGGTCCCTGCGTCCTCTGCCCCTCACTGCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp CCAGGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCGCAACCCAGTGGGCCTaGTGCTGCCTGGCACCTCGA +
Preference number: 4 (lower is better)
Translates to: PGCGMGDRGGGTWQTHSSATQWA*CCLAPR
Trigger: TCGAGGTGCCAGGCAGCATCAGGCCCACTGGGTTGC...GGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp GTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCCAAGTGCGGTCGTCACCTGTaGTCACGGCTGCCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: VVAWGTEEVGPGRPTAPKCGRHL*SRLPGA
Trigger: GGCGCCAGGCAGCCGTGATCACAGGTGACGACCGCA...CTTGGGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp GTTGGTGCTCACAGTGGATCTGAGGGATGGGCGTGCGTGGCAGGGCCTTGGCCACTGACGCCCCTGGGGTaGCGCTTGAGAGCCGGAAGC +
Preference number: 4 (lower is better)
Translates to: VGAHSGSEGWACVAGPWPLTPLG*RLRAGS
Trigger: GCTTCCGGCTCTCAAGCGTCACCCCAGGGGCGTCAG...TGGCCAAGGCCCTGCCACGCACGCCCATCCCTCAGATCCACTGTGAGCACCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp AAGGCACACGCAGCCGGGCCTGCAGACTCGAGCCCAGCAGGGACCATTAGGTCTCTGACGCCCCTGGGGTaGCGCTTGAGAGCCGGAAGC +
Preference number: 4 (lower is better)
Translates to: KAHAAGPADSSPAGTIRSLTPLG*RLRAGS
Trigger: GCTTCCGGCTCTCAAGCGTCACCCCAGGGGCGTCAG...AGACCTAATGGTCCCTGCTGGGCTCGAGTCTGCAGGCCCGGCTGCGTGTGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp CAGAGCAGTGAGGGGCAGAGGACGCAGGGACCAGATGGGTCTCCCAGGCCAGGTTCGGGAGGAGGCAGCTaGGGGCGACAGGATCTGCAC +
Preference number: 4 (lower is better)
Translates to: QSSEGQRTQGPDGSPRPGSGGGS*GRQDLH
Trigger: GTGCAGATCCTGTCGCCCTCAGCTGCCTCCTCCCGA...ACCTGGCCTGGGAGACCCATCTGGTCCCTGCGTCCTCTGCCCCTCACTGCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp GCTGTTCCAGGAGGAGGGAGGGGCCTCGGTTTCTCCCGGGGCATGTGGGCAGGACTTGGCCATGGCCCCTaGCCAACCCCTGTGCACCAA +
Preference number: 4 (lower is better)
Translates to: AVPGGGRGLGFSRGMWAGLGHGP*PTPVHQ
Trigger: TTGGTGCACAGGGGTTGGTCAGGGGCCATGGCCAAG...TCCTGCCCACATGCCCCGGGAGAAACCGAGGCCCCTCCCTCCTCCTGGAACAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp GACTTCTCCGTAGGTCAGGTCGCCCACCACGGGGTGGCCCAGGGCACTGCAGTGCCACACCTATCTCCCTaGCCAGGACCCACCTCCCGT +
Preference number: 4 (lower is better)
Translates to: DFSVGQVAHHGVAQGTAVPHLSP*PGPTSR
Trigger: ACGGGAGGTGGGTCCTGGTCAGGGAGATAGGTGTGG...CACTGCAGTGCCCTGGGCCACCCCGTGGTGGGCGACCTGACCTACGGAGAAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562070.1
CDS-3UTR GCA 90 bp TGTTCCAGGAGGAGGGAGGGGCCTCGGTTTCTCCCGGGGCATGTGGGCAGGAAGACAGGTTCTCCACGCTaGCTGGCTCCATGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: CSRRREGPRFLPGHVGRKTGSPR*LAPWPA
Trigger: GGCCGGCCATGGAGCCAGGCAGCGTGGAGAACCTGT...CTTCCTGCCCACATGCCCCGGGAGAAACCGAGGCCCCTCCCTCCTCCTGGAACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
CDS-3UTR GCA 90 bp GCCGGTCCTCCCGGCCCGAGACTTCTCCGTAGGTCAGGTCGCCCACCACGGGGTAAGCGGTACCGCAGCTaGTTCTGCAGGGTCAGAGTC +
Preference number: 4 (lower is better)
Translates to: AGPPGPRLLRRSGRPPRGKRYRS*FCRVRV
Trigger: GACTCTGACCCTGCAGAAGCAGCTGCGGTACCGCTT...ACCCCGTGGTGGGCGACCTGACCTACGGAGAAGTCTCGGGCCGGGAGGACCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565809.5
ENST00000567283.5
CDS-3UTR GCA 90 bp GCTCGCTCGCCCATCTCCCTAGAGTCCCGCTGTGCAGCTGACACCCCCTGCCCCAGCACCTGTACGCGCTaGCGGCGGCTGCCTTGTTTA +
Preference number: 4 (lower is better)
Translates to: ARSPISLESRCAADTPCPSTCTR*RRLPCL
Trigger: TAAACAAGGCAGCCGCCGGCAGCGCGTACAGGTGCT...GGGGCAGGGGGTGTCAGCTGCACAGCGGGACTCTAGGGAGATGGGCGAGCGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp GCTCGCTCGCCCATCTCCCTAGAGTCCCGCTGTGCAGCTGACACCCCCTGCCCCGGAGACAGGATCGCCTaGGTACAGCCCGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: ARSPISLESRCAADTPCPGDRIA*VQPVFQ
Trigger: CTGGAACACGGGCTGTACGCAGGCGATCCTGTCTCC...GGGGCAGGGGGTGTCAGCTGCACAGCGGGACTCTAGGGAGATGGGCGAGCGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp GCTGTTCCAGGAGGAGGGAGGGGCCTCGGTTTCTCCCGGGGCATGTGGGCAGGAAGCTGGTCCAGCGACTaGAGCAGTGTGTGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: AVPGGGRGLGFSRGMWAGSWSSD*SSVWGL
Trigger: GAGCCCCCACACACTGCTGCAGTCGCTGGACCAGCT...TCCTGCCCACATGCCCCGGGAGAAACCGAGGCCCCTCCCTCCTCCTGGAACAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp AGGGGCAGAGGACGCAGGGACCAGATGGGTCTCCCAGGCCAGGTGAGCCCAGAAGTGGCCCGTAAGGCCTaGACGAGCTGGTCCAGCGAC +
Preference number: 4 (lower is better)
Translates to: RGRGRRDQMGLPGQVSPEVARKA*TSWSSD
Trigger: GTCGCTGGACCAGCTCGTGCAGGCCTTACGGGCCAC...TTCTGGGCTCACCTGGCCTGGGAGACCCATCTGGTCCCTGCGTCCTCTGCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp TGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCCAAGCTCACTCCGACAGCCACTaGAGGCAGGGGCCCCGCTGT +
Preference number: 4 (lower is better)
Translates to: CGMGDRGGGTWQTHSSQAHSDSH*RQGPRC
Trigger: ACAGCGGGGCCCCTGCCTGCAGTGGCTGTCGGAGTG...AGCTTGGGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp GTTGGTGCTCACAGTGGATCTGAGGGATGGGCGTGCGTGGCAGGGCCTTGGCCAACACGCAGCCGGGCCTaGAGACTCGAGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: VGAHSGSEGWACVAGPWPTRSRA*RLEPSR
Trigger: CCTGCTGGGCTCGAGTCTGCAGGCCCGGCTGCGTGT...TGGCCAAGGCCCTGCCACGCACGCCCATCCCTCAGATCCACTGTGAGCACCAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp CAGAGCAGTGAGGGGCAGAGGACGCAGGGACCAGATGGGTCTCCCAGGCCAGGTTCTGAGGGATGGGCGTaGGTGGCAGGGCCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: QSSEGQRTQGPDGSPRPGSEGWA*VAGPWP
Trigger: TGGCCAAGGCCCTGCCACGCACGCCCATCCCTCAGA...ACCTGGCCTGGGAGACCCATCTGGTCCCTGCGTCCTCTGCCCCTCACTGCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp GCTGTAGCCAGGAGCCCAGGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGTCTGAGGGATGGGCGTaGGTGGCAGGGCCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: AVARSPGCGMGDRGGGTWSEGWA*VAGPWP
Trigger: TGGCCAAGGCCCTGCCACGCACGCCCATCCCTCAGA...CCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACCTGGGCTCCTGGCTACAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp AGAGCAGTGAGGGGCAGAGGACGCAGGGACCAGATGGGTCTCCCAGGCCAGGTGTCTGAGGGATGGGCGTaGGTGGCAGGGCCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: RAVRGRGRRDQMGLPGQVSEGWA*VAGPWP
Trigger: TGGCCAAGGCCCTGCCACGCACGCCCATCCCTCAGA...CACCTGGCCTGGGAGACCCATCTGGTCCCTGCGTCCTCTGCCCCTCACTGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp GCAGACGCTCGCTCGCCCATCTCCCTAGAGTCCCGCTGTGCAGCTGACACCCCCGTGACGTGGCAGAGCTaGCAGCAGGGGCCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: ADARSPISLESRCAADTPVTWQS*QQGPKR
Trigger: TCTCTTGGGCCCCTGCTGGCAGCTCTGCCACGTCAC...GGGGGTGTCAGCTGCACAGCGGGACTCTAGGGAGATGGGCGAGCGAGCGTCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp TGGCCCGTAAGGCCTGCACGAGCTGGTCCAGCGACTGCAGCAGTGTGTGGGGGCGTGACGTGGCAGAGCTaGCAGCAGGGGCCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: WPVRPARAGPATAAVCGGVTWQS*QQGPKR
Trigger: TCTCTTGGGCCCCTGCTGGCAGCTCTGCCACGTCAC...GCCCCCACACACTGCTGCAGTCGCTGGACCAGCTCGTGCAGGCCTTACGGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565809.5
CDS-3UTR GCA 90 bp TCCGGGCAGAGAGGGAACCACTGGTACAGTGAGGCCAAGGCACACGCAGCCGGGGCTGTGAGCACGTGGTaGGCCCCCAGCCCAGCATAC +
Preference number: 4 (lower is better)
Translates to: SGQRGNHWYSEAKAHAAGAVSTW*APSPAY
Trigger: GTATGCTGGGCTGGGGGCGCACCACGTGCTCACAGC...CCCGGCTGCGTGTGCCTTGGCCTCACTGTACCAGTGGTTCCCTCTCTGCCCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561734.5
CDS-3UTR GCA 90 bp GTTGGTGCTCACAGTGGATCTGAGGGATGGGCGTGCGTGGCAGGGCCTTGGCCAGCTGGTGGCAGAACCTaGTGCCGGGCCGTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: VGAHSGSEGWACVAGPWPAGGRT*CRAVQS
Trigger: GGACTGCACGGCCCGGCAGCAGGTTCTGCCACCAGC...TGGCCAAGGCCCTGCCACGCACGCCCATCCCTCAGATCCACTGTGAGCACCAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567114.5
CDS-3UTR CCA 90 bp TGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCCAAGCTGCGACCCAGAGACCCTaGAAGCTCCGCTCCGGACGC +
Preference number: 4 (lower is better)
Translates to: CGMGDRGGGTWQTHSSQAATQRP*KLRSGR
Trigger: GCGTCCGGAGCGGAGCTTCCAGGGTCTCTGGGTCGC...AGCTTGGGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp CAGAGCAGTGAGGGGCAGAGGACGCAGGGACCAGATGGGTCTCCCAGGCCAGGTGTTCTCCACGCTGCCTaGCTCCATGGCCGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: QSSEGQRTQGPDGSPRPGVLHAA*LHGRPA
Trigger: AGCAGGCCGGCCATGGAGCCAGGCAGCGTGGAGAAC...ACCTGGCCTGGGAGACCCATCTGGTCCCTGCGTCCTCTGCCCCTCACTGCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007264.7
ENST00000565809.5
CDS-3UTR CCA 90 bp GGACGCAGGGACCAGATGGGTCTCCCAGGCCAGGTGAGCCCAGAACGGCCCTTCACAGCGCCCCGCTGGTaGAGAAATCCAGCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: GRRDQMGLPGQVSPERPFTAPRW*RNPAGG
Trigger: GCCACCAGCTGGATTTCTCCACCAGCGGGGCGCTGT...GAAGGGCCGTTCTGGGCTCACCTGGCCTGGGAGACCCATCTGGTCCCTGCGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp CACACGCAGCCGGGCCTGCAGACTCGAGCCCAGCAGGGACCATTAGGTCTCGGGCGCACAGCGCCCCGCTaGTGGAGAAATCCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: HTQPGLQTRAQQGPLGLGRTAPR*WRNPAG
Trigger: ACCAGCTGGATTTCTCCACCAGCGGGGCGCTGTGCG...CCCGAGACCTAATGGTCCCTGCTGGGCTCGAGTCTGCAGGCCCGGCTGCGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp CGAGACTTCTCCGTAGGTCAGGTCGCCCACCACGGGGTGGCCCAGGGCACTGCACGCACAGCGCCCCGCTaGTGGAGAAATCCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: RDFSVGQVAHHGVAQGTARTAPR*WRNPAG
Trigger: ACCAGCTGGATTTCTCCACCAGCGGGGCGCTGTGCG...TGCAGTGCCCTGGGCCACCCCGTGGTGGGCGACCTGACCTACGGAGAAGTCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562070.1
ENST00000565809.5
ENST00000567283.5
CDS-3UTR CCA 90 bp AGTGCACGCGCAGCTGGTGTGTCCGGCCTGCGGGATGAGGGCGGTGCCGGATCAGTTACCCGGCTCTCCTaGATGTGCCCCCGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: SARAAGVSGLRDEGGAGSVTRLS*MCPRSN
Trigger: ATTGCTGCGGGGGCACATCCAGGAGAGCCGGGTAAC...TGATCCGGCACCGCCCTCATCCCGCAGGCCGGACACACCAGCTGCGCGTGCACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562070.1
CDS-3UTR CCA 90 bp GTGTCCGGCCTGCGGGATGAGGGCGGTGCCGGATCAAGCTGGGAGCGGGGCCGATTCCTGCCAATGGCATaGCTGATGGTTACCCGGCTC +
Preference number: 4 (lower is better)
Translates to: VSGLRDEGGAGSSWERGRFLPMA*LMVTRL
Trigger: GAGCCGGGTAACCATCAGCCATGCCATTGGCAGGAA...TCGGCCCCGCTCCCAGCTTGATCCGGCACCGCCCTCATCCCGCAGGCCGGACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562070.1
CDS-3UTR CCA 90 bp TCCCACGGCCGCGGTGCGGTCGTCACCTGTGATCACGGCTGCCTGGCGCCCCCTTTCCTGCCAATGGCATaGCTGATGGTTACCCGGCTC +
Preference number: 4 (lower is better)
Translates to: SHGRGAVVTCDHGCLAPPFLPMA*LMVTRL
Trigger: GAGCCGGGTAACCATCAGCCATGCCATTGGCAGGAA...AGGGGGCGCCAGGCAGCCGTGATCACAGGTGACGACCGCACCGCGGCCGTGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000567114.5
CDS-3UTR CCA 90 bp CCAGGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCTCGATGCACATGGTGTaGGCCCGGCCCTCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: PGCGMGDRGGGTWQTHSSSMHMV*ARPSVL
Trigger: CAGCACGGAGGGCCGGGCCCACACCATGTGCATCGA...GGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000567114.5
CDS-3UTR CCA 90 bp CAGAGCAGTGAGGGGCAGAGGACGCAGGGACCAGATGGGTCTCCCAGGCCAGGTTCGATGCACATGGTGTaGGCCCGGCCCTCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: QSSEGQRTQGPDGSPRPGSMHMV*ARPSVL
Trigger: CAGCACGGAGGGCCGGGCCCACACCATGTGCATCGA...ACCTGGCCTGGGAGACCCATCTGGTCCCTGCGTCCTCTGCCCCTCACTGCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000567114.5
CDS-3UTR CCA 90 bp TGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCCAAGCTAGCCCTCGATGCACATaGTGTGGGCCCGGCCCTCCG +
Preference number: 4 (lower is better)
Translates to: CGMGDRGGGTWQTHSSQASPRCT*CGPGPP
Trigger: CGGAGGGCCGGGCCCACACCATGTGCATCGAGGGCT...AGCTTGGGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000567114.5
CDS-3UTR CCA 90 bp TCCGTAGGTCAGGTCGCCCACCACGGGGTGGCCCAGGGCACTGCAGTGCACGCGCACACTCGGTGTCCGTaGGGATGCGCAGGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: SVGQVAHHGVAQGTAVHAHTRCP*GCAGRK
Trigger: CTTTCTACCTGCGCATCCCCACGGACACCGAGTGTG...CGCGTGCACTGCAGTGCCCTGGGCCACCCCGTGGTGGGCGACCTGACCTACGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562070.1
ENST00000565809.5
ENST00000567283.5
CDS-3UTR CCA 90 bp GTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCCAAGGGTCAGGGTCGGGGGTaGCCCGTAAGGCCTGCACGA +
Preference number: 4 (lower is better)
Translates to: VVAWGTEEVGPGRPTAPKGQGRG*PVRPAR
Trigger: TCGTGCAGGCCTTACGGGCCACCCCCGACCCTGACC...CTTGGGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp TGTTCCAGGAGGAGGGAGGGGCCTCGGTTTCTCCCGGGGCATGTGGGCAGGAAGTGCGTGGCAGGGCCTTaGCCATGGCCCCTGACCAAC +
Preference number: 4 (lower is better)
Translates to: CSRRREGPRFLPGHVGRKCVAGP*PWPLTN
Trigger: GTTGGTCAGGGGCCATGGCCAAGGCCCTGCCACGCA...CTTCCTGCCCACATGCCCCGGGAGAAACCGAGGCCCCTCCCTCCTCCTGGAACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp CAGAGCAGTGAGGGGCAGAGGACGCAGGGACCAGATGGGTCTCCCAGGCCAGGTTGCGTGGCAGGGCCTTaGCCATGGCCCCTGACCAAC +
Preference number: 4 (lower is better)
Translates to: QSSEGQRTQGPDGSPRPGCVAGP*PWPLTN
Trigger: GTTGGTCAGGGGCCATGGCCAAGGCCCTGCCACGCA...ACCTGGCCTGGGAGACCCATCTGGTCCCTGCGTCCTCTGCCCCTCACTGCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp AAGGCACACGCAGCCGGGCCTGCAGACTCGAGCCCAGCAGGGACCATTAGGTCTAGGGATGGGCGTGCGTaGCAGGGCCTTGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: KAHAAGPADSSPAGTIRSRDGRA*QGLGHG
Trigger: GCCATGGCCAAGGCCCTGCCACGCACGCCCATCCCT...AGACCTAATGGTCCCTGCTGGGCTCGAGTCTGCAGGCCCGGCTGCGTGTGCCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp CAGAGCAGTGAGGGGCAGAGGACGCAGGGACCAGATGGGTCTCCCAGGCCAGGTCCACAGCTCCCAAGCTaGGGTCCCGGAGGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: QSSEGQRTQGPDGSPRPGPQLPS*GPGGRV
Trigger: CACTCTGCCTCCGGGACCCCAGCTTGGGAGCTGTGG...ACCTGGCCTGGGAGACCCATCTGGTCCCTGCGTCCTCTGCCCCTCACTGCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp GAGCCGGAAGCTGTTCCAGGAGGAGGGAGGGGCCTCGGTTTCTCCCGGGGCATGCAGGAGCCCAGGTTGTaGCATGGGGGACAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: EPEAVPGGGRGLGFSRGMQEPRL*HGGQRR
Trigger: CCTCCTCTGTCCCCCATGCCACAACCTGGGCTCCTG...CATGCCCCGGGAGAAACCGAGGCCCCTCCCTCCTCCTGGAACAGCTTCCGGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp AGGGGCAGAGGACGCAGGGACCAGATGGGTCTCCCAGGCCAGGTGAGCCCAGAATGTGCTGTGAGCACGTaGTGCGCCCCCAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: RGRGRRDQMGLPGQVSPECAVST*CAPSPA
Trigger: TGCTGGGCTGGGGGCGCACCACGTGCTCACAGCACA...TTCTGGGCTCACCTGGCCTGGGAGACCCATCTGGTCCCTGCGTCCTCTGCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561734.5
CDS-3UTR TCA 90 bp AGGGGCAGAGGACGCAGGGACCAGATGGGTCTCCCAGGCCAGGTGAGCCCAGAACGTCCCAGTGCTTGTTaGCCACCAGGAAGTCGCGGC +
Preference number: 4 (lower is better)
Translates to: RGRGRRDQMGLPGQVSPERPSAC*PPGSRG
Trigger: GCCGCGACTTCCTGGTGGTCAACAAGCACTGGGACG...TTCTGGGCTCACCTGGCCTGGGAGACCCATCTGGTCCCTGCGTCCTCTGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
CDS-3UTR TCA 90 bp GGACGCAGGGACCAGATGGGTCTCCCAGGCCAGGTGAGCCCAGAACGGCCCTTCGCTGGTGGCAGAACCTaGACCCGTAGCAGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: GRRDQMGLPGQVSPERPFAGGRT*TRSRCQ
Trigger: CTGACACCTGCTACGGGTTCAGGTTCTGCCACCAGC...GAAGGGCCGTTCTGGGCTCACCTGGCCTGGGAGACCCATCTGGTCCCTGCGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
CDS-3UTR TCA 90 bp GGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCCAATCACGCGCCGCTCCTTaGAGCACCTGTACGCGCTGC +
Preference number: 4 (lower is better)
Translates to: GCGMGDRGGGTWQTHSSQSRAAP*STCTRC
Trigger: GCAGCGCGTACAGGTGCTTCAAGGAGCGGCGCGTGA...TTGGGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp GCGACAGGATCTGCACAGAGCAGTGAGGGGCAGAGGACGCAGGGACCAGATGGGGGTGTGTCCGGCCCGTaGGCGGCTTCAGCAGCACTT +
Preference number: 4 (lower is better)
Translates to: ATGSAQSSEGQRTQGPDGGVSGP*AASAAL
Trigger: AAGTGCTGCTGAAGCCGCTCACGGGCCGGACACACC...CCCATCTGGTCCCTGCGTCCTCTGCCCCTCACTGCTCTGTGCAGATCCTGTCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp GGCAGAGCTGCCAGCAGGGGCCCAAGAGACTGCAGCAGGTTGGTGCTCACAGTGCGTGCAGCATCATTCTaGACGGCCGGTCCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: GRAASRGPRDCSRLVLTVRAASF*TAGPPG
Trigger: GCCGGGAGGACCGGCCGTTCAGAATGATGCTGCACG...CACTGTGAGCACCAACCTGCTGCAGTCTCTTGGGCCCCTGCTGGCAGCTCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp GCGACAGGATCTGCACAGAGCAGTGAGGGGCAGAGGACGCAGGGACCAGATGGGCGTGCAGCATCATTCTaGACGGCCGGTCCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: ATGSAQSSEGQRTQGPDGRAASF*TAGPPG
Trigger: GCCGGGAGGACCGGCCGTTCAGAATGATGCTGCACG...CCCATCTGGTCCCTGCGTCCTCTGCCCCTCACTGCTCTGTGCAGATCCTGTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp TATTTGGAGTCCCTGGAGCCCTGCTGTAGCCAGGAGCCCAGGTTGTGGCATGGGAGGCCCCAGAGCCAGTaGGCAGACGCTCGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: YLESLEPCCSQEPRLWHGRPQSQ*ADARSP
Trigger: GGGCGAGCGAGCGTCTGCTCACTGGCTCTGGGGCCT...CCCATGCCACAACCTGGGCTCCTGGCTACAGCAGGGCTCCAGGGACTCCAAATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
CDS-3UTR TCA 90 bp GTTGGTGCTCACAGTGGATCTGAGGGATGGGCGTGCGTGGCAGGGCCTTGGCCAGCAACCCAGTGGGCCTaGTGCTGCCTGGCACCTCGA +
Preference number: 4 (lower is better)
Translates to: VGAHSGSEGWACVAGPWPATQWA*CCLAPR
Trigger: TCGAGGTGCCAGGCAGCATCAGGCCCACTGGGTTGC...TGGCCAAGGCCCTGCCACGCACGCCCATCCCTCAGATCCACTGTGAGCACCAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp GGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCCAAGCAACCCAGTGGGCCTaGTGCTGCCTGGCACCTCGA +
Preference number: 4 (lower is better)
Translates to: GCGMGDRGGGTWQTHSSQATQWA*CCLAPR
Trigger: TCGAGGTGCCAGGCAGCATCAGGCCCACTGGGTTGC...TTGGGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp AGGACGCAGGGACCAGATGGGTCTCCCAGGCCAGGTGAGCCCAGAACGGCCCTTATCTGCACAGAGCAGTaGGGGGCAGAGGACGCAGGG +
Preference number: 4 (lower is better)
Translates to: RTQGPDGSPRPGEPRTALICTEQ*GAEDAG
Trigger: CCCTGCGTCCTCTGCCCCTCACTGCTCTGTGCAGAT...AAGGGCCGTTCTGGGCTCACCTGGCCTGGGAGACCCATCTGGTCCCTGCGTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp TGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCCAAGCTTCGGGAGGAGGCAGCTaGGGGCGACAGGATCTGCAC +
Preference number: 4 (lower is better)
Translates to: CGMGDRGGGTWQTHSSQASGGGS*GRQDLH
Trigger: GTGCAGATCCTGTCGCCCTCAGCTGCCTCCTCCCGA...AGCTTGGGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp CCAAGGCACACGCAGCCGGGCCTGCAGACTCGAGCCCAGCAGGGACCATTAGGTCTTGGCCATGGCCCCTaGCCAACCCCTGTGCACCAA +
Preference number: 4 (lower is better)
Translates to: PRHTQPGLQTRAQQGPLGLGHGP*PTPVHQ
Trigger: TTGGTGCACAGGGGTTGGTCAGGGGCCATGGCCAAG...ACCTAATGGTCCCTGCTGGGCTCGAGTCTGCAGGCCCGGCTGCGTGTGCCTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp CACACGCAGCCGGGCCTGCAGACTCGAGCCCAGCAGGGACCATTAGGTCTCGGGGTCCCGGAGGCAGAGTaGCAATGCATGGCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: HTQPGLQTRAQQGPLGLGVPEAE*QCMAVW
Trigger: CCACACAGCCATGCATTGTCACTCTGCCTCCGGGAC...CCCGAGACCTAATGGTCCCTGCTGGGCTCGAGTCTGCAGGCCCGGCTGCGTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp CAGCAGCACTTTGGAGACAGGATCGCCTGCGTACAGCCCGTGTTCCAGAACCACCCATGGCCGGCCTGCTaGCGGGCCGTGCAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: QQHFGDRIACVQPVFQNHPWPAC*RAVQSR
Trigger: CCTGGACTGCACGGCCCGGCAGCAGGCCGGCCATGG...GTGGTTCTGGAACACGGGCTGTACGCAGGCGATCCTGTCTCCAAAGTGCTGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565503.5
ENST00000567283.5
CDS-3UTR GCA 90 bp GGGTGGCCCAGGGCACTGCAGTGCACGCGCAGCTGGTGTGTCCGGCCCGTGAGCATGCGAACGTCCCAGTaGTTGTTGACCACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GWPRALQCTRSWCVRPVSMRTSQ*LLTTRK
Trigger: CTTCCTGGTGGTCAACAAGCACTGGGACGTTCGCAT...GCTCACGGGCCGGACACACCAGCTGCGCGTGCACTGCAGTGCCCTGGGCCACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565809.5
ENST00000567283.5
CDS-3UTR GCA 90 bp GCACACGCAGCCGGGCCTGCAGACTCGAGCCCAGCAGGGACCATTAGGTCTCGGTACCGCAGCTGCTTCTaGAGGGTCAGAGTCTCCCGC +
Preference number: 4 (lower is better)
Translates to: AHAAGPADSSPAGTIRSRYRSCF*RVRVSR
Trigger: GCGGGAGACTCTGACCCTGCAGAAGCAGCTGCGGTA...CCGAGACCTAATGGTCCCTGCTGGGCTCGAGTCTGCAGGCCCGGCTGCGTGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
CDS-3UTR GCA 90 bp GCAGACGCTCGCTCGCCCATCTCCCTAGAGTCCCGCTGTGCAGCTGACACCCCCAGCACCTGTACGCGCTaGCGGCGGCTGCCTTGTTTA +
Preference number: 4 (lower is better)
Translates to: ADARSPISLESRCAADTPSTCTR*RRLPCL
Trigger: TAAACAAGGCAGCCGCCGGCAGCGCGTACAGGTGCT...GGGGGTGTCAGCTGCACAGCGGGACTCTAGGGAGATGGGCGAGCGAGCGTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp GCAGCCGGGCCTGCAGACTCGAGCCCAGCAGGGACCATTAGGTCTCGGGAGGAGAGCACCTGTACGCGCTaGCGGCGGCTGCCTTGTTTA +
Preference number: 4 (lower is better)
Translates to: AAGPADSSPAGTIRSREESTCTR*RRLPCL
Trigger: TAAACAAGGCAGCCGCCGGCAGCGCGTACAGGTGCT...CTCCTCCCGAGACCTAATGGTCCCTGCTGGGCTCGAGTCTGCAGGCCCGGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp GCGACAGGATCTGCACAGAGCAGTGAGGGGCAGAGGACGCAGGGACCAGATGGGCGGCTCTCCTGGATGTaGCCCCGCAGCAATGCCAGG +
Preference number: 4 (lower is better)
Translates to: ATGSAQSSEGQRTQGPDGRLSWM*PRSNAR
Trigger: CCTGGCATTGCTGCGGGGGCACATCCAGGAGAGCCG...CCCATCTGGTCCCTGCGTCCTCTGCCCCTCACTGCTCTGTGCAGATCCTGTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000567114.5
CDS-3UTR GCA 90 bp ACGTGGCAGAGCTGCCAGCAGGGGCCCAAGAGACTGCAGCAGGTTGGTGCTCACCGGCTCTCCTGGATGTaGCCCCGCAGCAATGCCAGG +
Preference number: 4 (lower is better)
Translates to: TWQSCQQGPKRLQQVGAHRLSWM*PRSNAR
Trigger: CCTGGCATTGCTGCGGGGGCACATCCAGGAGAGCCG...GTGAGCACCAACCTGCTGCAGTCTCTTGGGCCCCTGCTGGCAGCTCTGCCACGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000567114.5
CDS-3UTR GCA 90 bp GGGCGGTGCCGGATCAAGCTGGGAGCGGGGCCGATCCACACCTATCTCCCTGACGGAGACAGGATCGCCTaGGTACAGCCCGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: GRCRIKLGAGPIHTYLPDGDRIA*VQPVFQ
Trigger: CTGGAACACGGGCTGTACGCAGGCGATCCTGTCTCC...GTCAGGGAGATAGGTGTGGATCGGCCCCGCTCCCAGCTTGATCCGGCACCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562070.1
CDS-3UTR GCA 90 bp AAGGCACACGCAGCCGGGCCTGCAGACTCGAGCCCAGCAGGGACCATTAGGTCTCCCAGGGCACTGCAGTaGACGCGCAGCTGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: KAHAAGPADSSPAGTIRSPRALQ*TRSWCV
Trigger: GACACACCAGCTGCGCGTGCACTGCAGTGCCCTGGG...AGACCTAATGGTCCCTGCTGGGCTCGAGTCTGCAGGCCCGGCTGCGTGTGCCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp AGGACGCAGGGACCAGATGGGTCTCCCAGGCCAGGTGAGCCCAGAACGGCCCTTGGAAGGGGTCAGGCGTaGAGACCTCCACACACTCGG +
Preference number: 4 (lower is better)
Translates to: RTQGPDGSPRPGEPRTALGRGQA*RPPHTR
Trigger: CCGAGTGTGTGGAGGTCTGCACGCCTGACCCCTTCC...AAGGGCCGTTCTGGGCTCACCTGGCCTGGGAGACCCATCTGGTCCCTGCGTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp TCCGGGCAGAGAGGGAACCACTGGTACAGTGAGGCCAAGGCACACGCAGCCGGGAGCTGGTCCAGCGACTaGAGCAGTGTGTGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: SGQRGNHWYSEAKAHAAGSWSSD*SSVWGL
Trigger: GAGCCCCCACACACTGCTGCAGTCGCTGGACCAGCT...CCCGGCTGCGTGTGCCTTGGCCTCACTGTACCAGTGGTTCCCTCTCTGCCCGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp AGGACGCAGGGACCAGATGGGTCTCCCAGGCCAGGTGAGCCCAGAACGGCCCTTAGCTGGTCCAGCGACTaGAGCAGTGTGTGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: RTQGPDGSPRPGEPRTALSWSSD*SSVWGL
Trigger: GAGCCCCCACACACTGCTGCAGTCGCTGGACCAGCT...AAGGGCCGTTCTGGGCTCACCTGGCCTGGGAGACCCATCTGGTCCCTGCGTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp GTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCCAAGGTGGCCCGTAAGGCCTaGACGAGCTGGTCCAGCGAC +
Preference number: 4 (lower is better)
Translates to: VVAWGTEEVGPGRPTAPKVARKA*TSWSSD
Trigger: GTCGCTGGACCAGCTCGTGCAGGCCTTACGGGCCAC...CTTGGGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp GGTCCTCCCGGCCCGAGACTTCTCCGTAGGTCAGGTCGCCCACCACGGGGTGGCCCTGACCAACCCCTGTaGACCAAACACCACACTGAG +
Preference number: 4 (lower is better)
Translates to: GPPGPRLLRRSGRPPRGGPDQPL*TKHHTE
Trigger: CTCAGTGTGGTGTTTGGTGCACAGGGGTTGGTCAGG...GCCACCCCGTGGTGGGCGACCTGACCTACGGAGAAGTCTCGGGCCGGGAGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565809.5
CDS-3UTR GCA 90 bp GTGACGTGGCAGAGCTGCCAGCAGGGGCCCAAGAGACTGCAGCAGGTTGGTGCTCGAGCCACGCGTGGGTaGGTGTGCTGTGAGCACGTG +
Preference number: 4 (lower is better)
Translates to: VTWQSCQQGPKRLQQVGARATRG*VCCEHV
Trigger: CACGTGCTCACAGCACACGCACCCACGCGTGGCTCG...AGCACCAACCTGCTGCAGTCTCTTGGGCCCCTGCTGGCAGCTCTGCCACGTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561734.5
CDS-3UTR CCA 90 bp AGGGGCAGAGGACGCAGGGACCAGATGGGTCTCCCAGGCCAGGTGAGCCCAGAAACAGCGCCCCGCTGGTaGAGAAATCCAGCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: RGRGRRDQMGLPGQVSPETAPRW*RNPAGG
Trigger: GCCACCAGCTGGATTTCTCCACCAGCGGGGCGCTGT...TTCTGGGCTCACCTGGCCTGGGAGACCCATCTGGTCCCTGCGTCCTCTGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp GCTGTAGCCAGGAGCCCAGGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCGCACAGCGCCCCGCTaGTGGAGAAATCCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: AVARSPGCGMGDRGGGTWRTAPR*WRNPAG
Trigger: ACCAGCTGGATTTCTCCACCAGCGGGGCGCTGTGCG...CCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACCTGGGCTCCTGGCTACAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp TGTTCCAGGAGGAGGGAGGGGCCTCGGTTTCTCCCGGGGCATGTGGGCAGGAAGCGCACAGCGCCCCGCTaGTGGAGAAATCCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: CSRRREGPRFLPGHVGRKRTAPR*WRNPAG
Trigger: ACCAGCTGGATTTCTCCACCAGCGGGGCGCTGTGCG...CTTCCTGCCCACATGCCCCGGGAGAAACCGAGGCCCCTCCCTCCTCCTGGAACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp GTGTCCGGCCTGCGGGATGAGGGCGGTGCCGGATCAAGCTGGGAGCGGGGCCGATGTGAGGCTTGGCTTTaGGTTCTCACAACCCTGCGA +
Preference number: 4 (lower is better)
Translates to: VSGLRDEGGAGSSWERGRCEAWL*VLTTLR
Trigger: TCGCAGGGTTGTGAGAACCCAAAGCCAAGCCTCACA...TCGGCCCCGCTCCCAGCTTGATCCGGCACCGCCCTCATCCCGCAGGCCGGACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562070.1
CDS-3UTR CCA 90 bp GGGCATGTGGGCAGGAAGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTGCTTCAGCAGCACTTTaGAGACAGGATCGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: GHVGRKALGIPHQSHGRGASAAL*RQDRLR
Trigger: ACGCAGGCGATCCTGTCTCCAAAGTGCTGCTGAAGC...ACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCTTCCTGCCCACATGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp ATGTGGGCAGGAAGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTGCGGGCTTCAGCAGCACTTTaGAGACAGGATCGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: MWAGRPSGSRISPTAAVRASAAL*RQDRLR
Trigger: ACGCAGGCGATCCTGTCTCCAAAGTGCTGCTGAAGC...CCGCACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCTTCCTGCCCACAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp GCAGACGCTCGCTCGCCCATCTCCCTAGAGTCCCGCTGTGCAGCTGACACCCCCAAGGCCTGCACGAGCTaGTCCAGCGACTGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: ADARSPISLESRCAADTPKACTS*SSDCSS
Trigger: ACTGCTGCAGTCGCTGGACCAGCTCGTGCAGGCCTT...GGGGGTGTCAGCTGCACAGCGGGACTCTAGGGAGATGGGCGAGCGAGCGTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp CCTCCACACACTCGGTGTCCGTGGGGATGCGCAGGTAGAAAGCGTGCAGCATCACCTTCCTCGCAGGCCTaGCCGGGGCAACCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: PPHTRCPWGCAGRKRAASPSSQA*PGQPSG
Trigger: CCCACTGGGTTGCCCCGGCCAGGCCTGCGAGGAAGG...TGATGCTGCACGCTTTCTACCTGCGCATCCCCACGGACACCGAGTGTGTGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565809.5
CDS-3UTR CCA 90 bp ACGTGGCAGAGCTGCCAGCAGGGGCCCAAGAGACTGCAGCAGGTTGGTGCTCACGCAGGGCCTTGGCCATaGCCCCTGACCAACCCCTGT +
Preference number: 4 (lower is better)
Translates to: TWQSCQQGPKRLQQVGAHAGPWP*PLTNPC
Trigger: ACAGGGGTTGGTCAGGGGCCATGGCCAAGGCCCTGC...GTGAGCACCAACCTGCTGCAGTCTCTTGGGCCCCTGCTGGCAGCTCTGCCACGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp AAGCTGGGGTCCCGGAGGCAGAGTGACAATGCATGGCTGTGTGGGAGCCAGGCAAGGGATGGGCGTGCGTaGCAGGGCCTTGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: KLGSRRQSDNAWLCGSQARDGRA*QGLGHG
Trigger: GCCATGGCCAAGGCCCTGCCACGCACGCCCATCCCT...TGCCTGGCTCCCACACAGCCATGCATTGTCACTCTGCCTCCGGGACCCCAGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp AGGGGCAGAGGACGCAGGGACCAGATGGGTCTCCCAGGCCAGGTGAGCCCAGAAAGTGGATCTGAGGGATaGGCGTGCGTGGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: RGRGRRDQMGLPGQVSPESGSEG*ACVAGP
Trigger: AGGCCCTGCCACGCACGCCCATCCCTCAGATCCACT...TTCTGGGCTCACCTGGCCTGGGAGACCCATCTGGTCCCTGCGTCCTCTGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp GGGCATGTGGGCAGGAAGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTCAGAGTGACAATGCATaGCTGTGTGGGAGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: GHVGRKALGIPHQSHGRGQSDNA*LCGSQA
Trigger: TGCCTGGCTCCCACACAGCCATGCATTGTCACTCTG...ACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCTTCCTGCCCACATGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp GGCAGAGCTGCCAGCAGGGGCCCAAGAGACTGCAGCAGGTTGGTGCTCACAGTGCCACAGCTCCCAAGCTaGGGTCCCGGAGGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: GRAASRGPRDCSRLVLTVPQLPS*GPGGRV
Trigger: CACTCTGCCTCCGGGACCCCAGCTTGGGAGCTGTGG...CACTGTGAGCACCAACCTGCTGCAGTCTCTTGGGCCCCTGCTGGCAGCTCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp AGGGGCAGAGGACGCAGGGACCAGATGGGTCTCCCAGGCCAGGTGAGCCCAGAACAGGAGCCCAGGTTGTaGCATGGGGGACAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: RGRGRRDQMGLPGQVSPEQEPRL*HGGQRR
Trigger: CCTCCTCTGTCCCCCATGCCACAACCTGGGCTCCTG...TTCTGGGCTCACCTGGCCTGGGAGACCCATCTGGTCCCTGCGTCCTCTGCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp GGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCCAACGTCCCAGTGCTTGTTaGCCACCAGGAAGTCGCGGC +
Preference number: 4 (lower is better)
Translates to: GCGMGDRGGGTWQTHSSQRPSAC*PPGSRG
Trigger: GCCGCGACTTCCTGGTGGTCAACAAGCACTGGGACG...TTGGGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
CDS-3UTR TCA 90 bp AGAGCAGTGAGGGGCAGAGGACGCAGGGACCAGATGGGTCTCCCAGGCCAGGTGGCTGGTGGCAGAACCTaGACCCGTAGCAGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: RAVRGRGRRDQMGLPGQVAGGRT*TRSRCQ
Trigger: CTGACACCTGCTACGGGTTCAGGTTCTGCCACCAGC...CACCTGGCCTGGGAGACCCATCTGGTCCCTGCGTCCTCTGCCCCTCACTGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
CDS-3UTR TCA 90 bp CGAGCCCTCGATGCACATGGTGTGGGCCCGGCCCTCCGTGCTGTTCCTGCCAATGCTGGTGGCAGAACCTaGACCCGTAGCAGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: RALDAHGVGPALRAVPANAGGRT*TRSRCQ
Trigger: CTGACACCTGCTACGGGTTCAGGTTCTGCCACCAGC...ATTGGCAGGAACAGCACGGAGGGCCGGGCCCACACCATGTGCATCGAGGGCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565503.5
CDS-3UTR TCA 90 bp CAGCATCATTCTGAACGGCCGGTCCTCCCGGCCCGAGACTTCTCCGTAGGTCAGTCACGCGCCGCTCCTTaGAGCACCTGTACGCGCTGC +
Preference number: 4 (lower is better)
Translates to: QHHSERPVLPARDFSVGQSRAAP*STCTRC
Trigger: GCAGCGCGTACAGGTGCTTCAAGGAGCGGCGCGTGA...CTGACCTACGGAGAAGTCTCGGGCCGGGAGGACCGGCCGTTCAGAATGATGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562070.1
ENST00000565809.5
ENST00000567283.5
CDS-3UTR TCA 90 bp ATGTGGGCAGGAAGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTGCGGGAACCACGAGATCTGTaGGGCTTGGCTTTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: MWAGRPSGSRISPTAAVREPRDL*GLALGS
Trigger: AGAACCCAAAGCCAAGCCTCACAGATCTCGTGGTTC...CCGCACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCTTCCTGCCCACAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp GTGACGTGGCAGAGCTGCCAGCAGGGGCCCAAGAGACTGCAGCAGGTTGGTGCTCCCTGGGGTGACGCTTaGGAGCCGGAAGCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: VTWQSCQQGPKRLQQVGAPWGDA*EPEAVP
Trigger: TGGAACAGCTTCCGGCTCTCAAGCGTCACCCCAGGG...AGCACCAACCTGCTGCAGTCTCTTGGGCCCCTGCTGGCAGCTCTGCCACGTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp ACGTGGCAGAGCTGCCAGCAGGGGCCCAAGAGACTGCAGCAGGTTGGTGCTCACCCCTGGGGTGACGCTTaGGAGCCGGAAGCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: TWQSCQQGPKRLQQVGAHPWGDA*EPEAVP
Trigger: TGGAACAGCTTCCGGCTCTCAAGCGTCACCCCAGGG...GTGAGCACCAACCTGCTGCAGTCTCTTGGGCCCCTGCTGGCAGCTCTGCCACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp GGCAGAGCTGCCAGCAGGGGCCCAAGAGACTGCAGCAGGTTGGTGCTCACAGTGATCTGCACAGAGCAGTaGGGGGCAGAGGACGCAGGG +
Preference number: 4 (lower is better)
Translates to: GRAASRGPRDCSRLVLTVICTEQ*GAEDAG
Trigger: CCCTGCGTCCTCTGCCCCTCACTGCTCTGTGCAGAT...CACTGTGAGCACCAACCTGCTGCAGTCTCTTGGGCCCCTGCTGGCAGCTCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp AAGCTGGGGTCCCGGAGGCAGAGTGACAATGCATGGCTGTGTGGGAGCCAGGCATCGGGAGGAGGCAGCTaGGGGCGACAGGATCTGCAC +
Preference number: 4 (lower is better)
Translates to: KLGSRRQSDNAWLCGSQASGGGS*GRQDLH
Trigger: GTGCAGATCCTGTCGCCCTCAGCTGCCTCCTCCCGA...TGCCTGGCTCCCACACAGCCATGCATTGTCACTCTGCCTCCGGGACCCCAGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp CAGGTAGAAAGCGTGCAGCATCATTCTGAACGGCCGGTCCTCCCGGCCCGAGACTCGGGAGGAGGCAGCTaGGGGCGACAGGATCTGCAC +
Preference number: 4 (lower is better)
Translates to: QVESVQHHSERPVLPARDSGGGS*GRQDLH
Trigger: GTGCAGATCCTGTCGCCCTCAGCTGCCTCCTCCCGA...GTCTCGGGCCGGGAGGACCGGCCGTTCAGAATGATGCTGCACGCTTTCTACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565809.5
CDS-3UTR TCA 90 bp TCCGGGCAGAGAGGGAACCACTGGTACAGTGAGGCCAAGGCACACGCAGCCGGGGAACCACTGGTACAGTaGGGCCAAGGCACACGCAGC +
Preference number: 4 (lower is better)
Translates to: SGQRGNHWYSEAKAHAAGEPLVQ*GQGTRS
Trigger: GCTGCGTGTGCCTTGGCCTCACTGTACCAGTGGTTC...CCCGGCTGCGTGTGCCTTGGCCTCACTGTACCAGTGGTTCCCTCTCTGCCCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp CCAGGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCGAACCACTGGTACAGTaGGGCCAAGGCACACGCAGC +
Preference number: 4 (lower is better)
Translates to: PGCGMGDRGGGTWQTHSSEPLVQ*GQGTRS
Trigger: GCTGCGTGTGCCTTGGCCTCACTGTACCAGTGGTTC...GGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp GGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCCAATGCTCACAGTGGATCTaGGGGATGGGCGTGCGTGGC +
Preference number: 4 (lower is better)
Translates to: GCGMGDRGGGTWQTHSSQCSQWI*GMGVRG
Trigger: GCCACGCACGCCCATCCCTCAGATCCACTGTGAGCA...TTGGGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp TGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCCAAGCTTGCTCACAGTGGATCTaGGGGATGGGCGTGCGTGGC +
Preference number: 4 (lower is better)
Translates to: CGMGDRGGGTWQTHSSQACSQWI*GMGVRG
Trigger: GCCACGCACGCCCATCCCTCAGATCCACTGTGAGCA...AGCTTGGGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp ACGTGGCAGAGCTGCCAGCAGGGGCCCAAGAGACTGCAGCAGGTTGGTGCTCACTGCTCACAGTGGATCTaGGGGATGGGCGTGCGTGGC +
Preference number: 4 (lower is better)
Translates to: TWQSCQQGPKRLQQVGAHCSQWI*GMGVRG
Trigger: GCCACGCACGCCCATCCCTCAGATCCACTGTGAGCA...GTGAGCACCAACCTGCTGCAGTCTCTTGGGCCCCTGCTGGCAGCTCTGCCACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp GTTGGTGCTCACAGTGGATCTGAGGGATGGGCGTGCGTGGCAGGGCCTTGGCCATGCTCACAGTGGATCTaGGGGATGGGCGTGCGTGGC +
Preference number: 4 (lower is better)
Translates to: VGAHSGSEGWACVAGPWPCSQWI*GMGVRG
Trigger: GCCACGCACGCCCATCCCTCAGATCCACTGTGAGCA...TGGCCAAGGCCCTGCCACGCACGCCCATCCCTCAGATCCACTGTGAGCACCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp TCCGGGCAGAGAGGGAACCACTGGTACAGTGAGGCCAAGGCACACGCAGCCGGGGTCCCGGAGGCAGAGTaGCAATGCATGGCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: SGQRGNHWYSEAKAHAAGVPEAE*QCMAVW
Trigger: CCACACAGCCATGCATTGTCACTCTGCCTCCGGGAC...CCCGGCTGCGTGTGCCTTGGCCTCACTGTACCAGTGGTTCCCTCTCTGCCCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp CTCGGTGTCCGTGGGGATGCGCAGGTAGAAAGCGTGCAGCATCATTCTGAACGGGTCCGGCCTGCGGGATaGGGGCGGTGCCGGATCAAG +
Preference number: 4 (lower is better)
Translates to: LGVRGDAQVESVQHHSERVRPAG*GRCRIK
Trigger: CTTGATCCGGCACCGCCCTCATCCCGCAGGCCGGAC...CCGTTCAGAATGATGCTGCACGCTTTCTACCTGCGCATCCCCACGGACACCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562070.1
CDS-3UTR GCA 90 bp GGGCATGTGGGCAGGAAGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTATGCGAACGTCCCAGTaGTTGTTGACCACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GHVGRKALGIPHQSHGRGMRTSQ*LLTTRK
Trigger: CTTCCTGGTGGTCAACAAGCACTGGGACGTTCGCAT...ACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCTTCCTGCCCACATGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
CDS-3UTR GCA 90 bp GAAGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTGCGGTCGTCACCTGACGCCTTGCTGTCAATaGGAACGTCCCAGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: EGPRDPASVPRPRCGRHLTPCCQ*ERPSAC
Trigger: ACAAGCACTGGGACGTTCGCATTGACAGCAAGGCGT...CAGGTGACGACCGCACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
CDS-3UTR GCA 90 bp CGAGCCCTCGATGCACATGGTGTGGGCCCGGCCCTCCGTGCTGTTCCTGCCAATTACCGCAGCTGCTTCTaGAGGGTCAGAGTCTCCCGC +
Preference number: 4 (lower is better)
Translates to: RALDAHGVGPALRAVPANYRSCF*RVRVSR
Trigger: GCGGGAGACTCTGACCCTGCAGAAGCAGCTGCGGTA...ATTGGCAGGAACAGCACGGAGGGCCGGGCCCACACCATGTGCATCGAGGGCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565503.5
CDS-3UTR GCA 90 bp AGGACGCAGGGACCAGATGGGTCTCCCAGGCCAGGTGAGCCCAGAACGGCCCTTTACCGCAGCTGCTTCTaGAGGGTCAGAGTCTCCCGC +
Preference number: 4 (lower is better)
Translates to: RTQGPDGSPRPGEPRTALYRSCF*RVRVSR
Trigger: GCGGGAGACTCTGACCCTGCAGAAGCAGCTGCGGTA...AAGGGCCGTTCTGGGCTCACCTGGCCTGGGAGACCCATCTGGTCCCTGCGTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
CDS-3UTR GCA 90 bp TGTTCCAGGAGGAGGGAGGGGCCTCGGTTTCTCCCGGGGCATGTGGGCAGGAAGGTGCCCCCGCAGCAATaGCAGGTAAGCCTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: CSRRREGPRFLPGHVGRKVPPQQ*QVSLGH
Trigger: GTGACCAAGGCTTACCTGGCATTGCTGCGGGGGCAC...CTTCCTGCCCACATGCCCCGGGAGAAACCGAGGCCCCTCCCTCCTCCTGGAACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000567114.5
CDS-3UTR GCA 90 bp CAGGTAGAAAGCGTGCAGCATCATTCTGAACGGCCGGTCCTCCCGGCCCGAGACCCCAGGGCACTGCAGTaGACGCGCAGCTGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: QVESVQHHSERPVLPARDPRALQ*TRSWCV
Trigger: GACACACCAGCTGCGCGTGCACTGCAGTGCCCTGGG...GTCTCGGGCCGGGAGGACCGGCCGTTCAGAATGATGCTGCACGCTTTCTACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562070.1
ENST00000565809.5
ENST00000567283.5
CDS-3UTR GCA 90 bp AAAGCGTGCAGCATCATTCTGAACGGCCGGTCCTCCCGGCCCGAGACTTCTCCGTCTGAGGGATGGGCGTaGGTGGCAGGGCCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: KACSIILNGRSSRPETSPSEGWA*VAGPWP
Trigger: TGGCCAAGGCCCTGCCACGCACGCCCATCCCTCAGA...CGGAGAAGTCTCGGGCCGGGAGGACCGGCCGTTCAGAATGATGCTGCACGCTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565809.5
CDS-3UTR GCA 90 bp GCACACGCAGCCGGGCCTGCAGACTCGAGCCCAGCAGGGACCATTAGGTCTCGGAGGGGCCCAAGAGACTaGAGCAGGTTGGTGCTCACA +
Preference number: 4 (lower is better)
Translates to: AHAAGPADSSPAGTIRSRRGPRD*SRLVLT
Trigger: TGTGAGCACCAACCTGCTGCAGTCTCTTGGGCCCCT...CCGAGACCTAATGGTCCCTGCTGGGCTCGAGTCTGCAGGCCCGGCTGCGTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp GTTGGTGCTCACAGTGGATCTGAGGGATGGGCGTGCGTGGCAGGGCCTTGGCCAGTGACGTGGCAGAGCTaGCAGCAGGGGCCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: VGAHSGSEGWACVAGPWPVTWQS*QQGPKR
Trigger: TCTCTTGGGCCCCTGCTGGCAGCTCTGCCACGTCAC...TGGCCAAGGCCCTGCCACGCACGCCCATCCCTCAGATCCACTGTGAGCACCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp GCTGTAGCCAGGAGCCCAGGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGTCCGCAGCCCTACTGTaGACCTGCATCCTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: AVARSPGCGMGDRGGGTWSAALL*TCILSP
Trigger: GGGACTGAGGATGCAGGTGCACAGTAGGGCTGCGGA...CCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACCTGGGCTCCTGGCTACAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561734.5
CDS-3UTR CCA 90 bp CCAGGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCGGCTCCGGTACACGATaGACAGGTTCTCCACGCTGC +
Preference number: 4 (lower is better)
Translates to: PGCGMGDRGGGTWQTHSSGSGTR*TGSPRC
Trigger: GCAGCGTGGAGAACCTGTCCATCGTGTACCGGAGCC...GGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
CDS-3UTR CCA 90 bp TGTTCCAGGAGGAGGGAGGGGCCTCGGTTTCTCCCGGGGCATGTGGGCAGGAAGGGCTCCGGTACACGATaGACAGGTTCTCCACGCTGC +
Preference number: 4 (lower is better)
Translates to: CSRRREGPRFLPGHVGRKGSGTR*TGSPRC
Trigger: GCAGCGTGGAGAACCTGTCCATCGTGTACCGGAGCC...CTTCCTGCCCACATGCCCCGGGAGAAACCGAGGCCCCTCCCTCCTCCTGGAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
CDS-3UTR CCA 90 bp AAGGCACACGCAGCCGGGCCTGCAGACTCGAGCCCAGCAGGGACCATTAGGTCTACAGCGCCCCGCTGGTaGAGAAATCCAGCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: KAHAAGPADSSPAGTIRSTAPRW*RNPAGG
Trigger: GCCACCAGCTGGATTTCTCCACCAGCGGGGCGCTGT...AGACCTAATGGTCCCTGCTGGGCTCGAGTCTGCAGGCCCGGCTGCGTGTGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp CACATGGTGTGGGCCCGGCCCTCCGTGCTGTTCCTGCCAATGGCATGGCTGATGACAGCGCCCCGCTGGTaGAGAAATCCAGCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: HMVWARPSVLFLPMAWLMTAPRW*RNPAGG
Trigger: GCCACCAGCTGGATTTCTCCACCAGCGGGGCGCTGT...CATCAGCCATGCCATTGGCAGGAACAGCACGGAGGGCCGGGCCCACACCATGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565503.5
CDS-3UTR CCA 90 bp GCTGTAGCCAGGAGCCCAGGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGGTTACCCGGCTCTCCTaGATGTGCCCCCGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: AVARSPGCGMGDRGGGTWVTRLS*MCPRSN
Trigger: ATTGCTGCGGGGGCACATCCAGGAGAGCCGGGTAAC...CCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACCTGGGCTCCTGGCTACAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000567114.5
CDS-3UTR CCA 90 bp CAGAGCAGTGAGGGGCAGAGGACGCAGGGACCAGATGGGTCTCCCAGGCCAGGTGTTACCCGGCTCTCCTaGATGTGCCCCCGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: QSSEGQRTQGPDGSPRPGVTRLS*MCPRSN
Trigger: ATTGCTGCGGGGGCACATCCAGGAGAGCCGGGTAAC...ACCTGGCCTGGGAGACCCATCTGGTCCCTGCGTCCTCTGCCCCTCACTGCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000567114.5
CDS-3UTR CCA 90 bp CATCATTCTGAACGGCCGGTCCTCCCGGCCCGAGACTTCTCCGTAGGTCAGGTCTCGATGCACATGGTGTaGGCCCGGCCCTCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: HHSERPVLPARDFSVGQVSMHMV*ARPSVL
Trigger: CAGCACGGAGGGCCGGGCCCACACCATGTGCATCGA...GACCTGACCTACGGAGAAGTCTCGGGCCGGGAGGACCGGCCGTTCAGAATGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562070.1
ENST00000567283.5
CDS-3UTR CCA 90 bp AGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTGCGGTCGTCACCTGTGTGTGAGGCTTGGCTTTaGGTTCTCACAACCCTGCGA +
Preference number: 4 (lower is better)
Translates to: RPSGSRISPTAAVRSSPVCEAWL*VLTTLR
Trigger: TCGCAGGGTTGTGAGAACCCAAAGCCAAGCCTCACA...CACAGGTGACGACCGCACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000567114.5
CDS-3UTR CCA 90 bp CCTCCCGGCCCGAGACTTCTCCGTAGGTCAGGTCGCCCACCACGGGGTGGCCCATGTGAGGCTTGGCTTTaGGTTCTCACAACCCTGCGA +
Preference number: 4 (lower is better)
Translates to: PPGPRLLRRSGRPPRGGPCEAWL*VLTTLR
Trigger: TCGCAGGGTTGTGAGAACCCAAAGCCAAGCCTCACA...TGGGCCACCCCGTGGTGGGCGACCTGACCTACGGAGAAGTCTCGGGCCGGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562070.1
ENST00000567283.5
CDS-3UTR CCA 90 bp GGGTGGCCCAGGGCACTGCAGTGCACGCGCAGCTGGTGTGTCCGGCCCGTGAGCGAGATCTGTGAGGCTTaGCTTTGGGTTCTCACAACC +
Preference number: 4 (lower is better)
Translates to: GWPRALQCTRSWCVRPVSEICEA*LWVLTT
Trigger: GGTTGTGAGAACCCAAAGCCAAGCCTCACAGATCTC...GCTCACGGGCCGGACACACCAGCTGCGCGTGCACTGCAGTGCCCTGGGCCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565809.5
ENST00000567283.5
CDS-3UTR CCA 90 bp TGCAGTCTTGAAGCAGCCTCTTGGGGTGGAACTCTCCCTGTCCCCTGCCATGAGTCGCCCACCACGGGGTaGCCCAGGGCACTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: CSLEAASWGGTLPVPCHESPTTG*PRALQC
Trigger: GCACTGCAGTGCCCTGGGCCACCCCGTGGTGGGCGA...CTCATGGCAGGGGACAGGGAGAGTTCCACCCCAAGAGGCTGCTTCAAGACTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562070.1
CDS-3UTR CCA 90 bp GGGAGGGCAGGAAGGGGTCAGGCGTGCAGACCTCCACACACTCGGTGTCCGTGGCACACTCGGTGTCCGTaGGGATGCGCAGGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: GRAGRGQACRPPHTRCPWHTRCP*GCAGRK
Trigger: CTTTCTACCTGCGCATCCCCACGGACACCGAGTGTG...CCACGGACACCGAGTGTGTGGAGGTCTGCACGCCTGACCCCTTCCTGCCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565809.5
ENST00000567283.5
CDS-3UTR CCA 90 bp CAGAGCAGTGAGGGGCAGAGGACGCAGGGACCAGATGGGTCTCCCAGGCCAGGTAAGGCCTGCACGAGCTaGTCCAGCGACTGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: QSSEGQRTQGPDGSPRPGKACTS*SSDCSS
Trigger: ACTGCTGCAGTCGCTGGACCAGCTCGTGCAGGCCTT...ACCTGGCCTGGGAGACCCATCTGGTCCCTGCGTCCTCTGCCCCTCACTGCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp TCCGGGCAGAGAGGGAACCACTGGTACAGTGAGGCCAAGGCACACGCAGCCGGGAAGGCCTGCACGAGCTaGTCCAGCGACTGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: SGQRGNHWYSEAKAHAAGKACTS*SSDCSS
Trigger: ACTGCTGCAGTCGCTGGACCAGCTCGTGCAGGCCTT...CCCGGCTGCGTGTGCCTTGGCCTCACTGTACCAGTGGTTCCCTCTCTGCCCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp GAGCCGGAAGCTGTTCCAGGAGGAGGGAGGGGCCTCGGTTTCTCCCGGGGCATGGCCTATCCCAAAACCTaGCCCTGCCTCTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: EPEAVPGGGRGLGFSRGMAYPKT*PCLFLR
Trigger: CCTCAGGAAGAGGCAGGGCCAGGTTTTGGGATAGGC...CATGCCCCGGGAGAAACCGAGGCCCCTCCCTCCTCCTGGAACAGCTTCCGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp GCACACGCAGCCGGGCCTGCAGACTCGAGCCCAGCAGGGACCATTAGGTCTCGGGCCTATCCCAAAACCTaGCCCTGCCTCTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: AHAAGPADSSPAGTIRSRAYPKT*PCLFLR
Trigger: CCTCAGGAAGAGGCAGGGCCAGGTTTTGGGATAGGC...CCGAGACCTAATGGTCCCTGCTGGGCTCGAGTCTGCAGGCCCGGCTGCGTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp GCAGACGCTCGCTCGCCCATCTCCCTAGAGTCCCGCTGTGCAGCTGACACCCCCGCCTATCCCAAAACCTaGCCCTGCCTCTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: ADARSPISLESRCAADTPAYPKT*PCLFLR
Trigger: CCTCAGGAAGAGGCAGGGCCAGGTTTTGGGATAGGC...GGGGGTGTCAGCTGCACAGCGGGACTCTAGGGAGATGGGCGAGCGAGCGTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp GAAGCTGTTCCAGGAGGAGGGAGGGGCCTCGGTTTCTCCCGGGGCATGTGGGCAAGAGGAGGTGGGACCTaGCAGACCCACAGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: EAVPGGGRGLGFSRGMWARGGGT*QTHSSQ
Trigger: TTGGGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCT...TGCCCACATGCCCCGGGAGAAACCGAGGCCCCTCCCTCCTCCTGGAACAGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp GCCCAGGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTAGAGGAGGTGGGACCTaGCAGACCCACAGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: AQVVAWGTEEVGPGRPTARGGGT*QTHSSQ
Trigger: TTGGGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCT...AGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACCTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp GTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCCAAGCAGGAGCCCAGGTTGTaGCATGGGGGACAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: VVAWGTEEVGPGRPTAPKQEPRL*HGGQRR
Trigger: CCTCCTCTGTCCCCCATGCCACAACCTGGGCTCCTG...CTTGGGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp GATGAGGGCGGTGCCGGATCAAGCTGGGAGCGGGGCCGATCCACACCTATCTCCAGGACAGGGCCAGGGTaGTGCTCGGTCCTGGAGAAT +
Preference number: 4 (lower is better)
Translates to: DEGGAGSSWERGRSTPISRTGPG*CSVLEN
Trigger: ATTCTCCAGGACCGAGCACCACCCTGGCCCTGTCCT...GGAGATAGGTGTGGATCGGCCCCGCTCCCAGCTTGATCCGGCACCGCCCTCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562070.1
3UTR CAA 72 bp CCAGGACCCACCTCCCGTCATGACCCCGCTGCAGTCTaGAAGCAGCCTCTTGGGGTGGAACTCTCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: PGPTSRHDPAAV*KQPLGVELSLS
Trigger: GGACAGGGAGAGTTCCACCCCAAGAGGCTGCTTCAAGACTGCAGCGGGGTCATGACGGGAGGTGGGTCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562070.1
3UTR CAA 72 bp TGGTGTGTCCGGCCCGTGAGCGGCTTCAGCAGCACTTaGGAGACAGGATCGCCTGCGTACAGCCCGTGTTCC +
Preference number: 4 (lower is better)
Translates to: WCVRPVSGFSST*ETGSPAYSPCS
Trigger: GGAACACGGGCTGTACGCAGGCGATCCTGTCTCCAAAGTGCTGCTGAAGCCGCTCACGGGCCGGACACACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567283.5
CDS-3UTR TCA 90 bp GTAGAAAGCGTGCAGCATCATTCTGAACGGCCGGTCCTCCCGGCCCGAGACTTCTCACGCGCCGCTCCTTaGAGCACCTGTACGCGCTGC +
Preference number: 4 (lower is better)
Translates to: VESVQHHSERPVLPARDFSRAAP*STCTRC
Trigger: GCAGCGCGTACAGGTGCTTCAAGGAGCGGCGCGTGA...GAAGTCTCGGGCCGGGAGGACCGGCCGTTCAGAATGATGCTGCACGCTTTCTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562070.1
ENST00000565809.5
ENST00000567283.5
CDS-3UTR TCA 90 bp GTAGAAAGCGTGCAGCATCATTCTGAACGGCCGGTCCTCCCGGCCCGAGACTTCCGTGCAGCATCATTCTaGACGGCCGGTCCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: VESVQHHSERPVLPARDFRAASF*TAGPPG
Trigger: GCCGGGAGGACCGGCCGTTCAGAATGATGCTGCACG...GAAGTCTCGGGCCGGGAGGACCGGCCGTTCAGAATGATGCTGCACGCTTTCTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562070.1
ENST00000565809.5
ENST00000567283.5
CDS-3UTR TCA 90 bp CTCGGTGTCCGTGGGGATGCGCAGGTAGAAAGCGTGCAGCATCATTCTGAACGGTGCGGTCGTCACCTGTaGTCACGGCTGCCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: LGVRGDAQVESVQHHSERCGRHL*SRLPGA
Trigger: GGCGCCAGGCAGCCGTGATCACAGGTGACGACCGCA...CCGTTCAGAATGATGCTGCACGCTTTCTACCTGCGCATCCCCACGGACACCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565809.5
CDS-3UTR TCA 90 bp AAAGCGTGCAGCATCATTCTGAACGGCCGGTCCTCCCGGCCCGAGACTTCTCCGCCCTGGGGTGACGCTTaGGAGCCGGAAGCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: KACSIILNGRSSRPETSPPWGDA*EPEAVP
Trigger: TGGAACAGCTTCCGGCTCTCAAGCGTCACCCCAGGG...CGGAGAAGTCTCGGGCCGGGAGGACCGGCCGTTCAGAATGATGCTGCACGCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565809.5
CDS-3UTR GCA 90 bp ACGTGGCAGAGCTGCCAGCAGGGGCCCAAGAGACTGCAGCAGGTTGGTGCTCACTCTCCCGCCACGCCTTaGTGTCAATGCGAACGTCCC +
Preference number: 4 (lower is better)
Translates to: TWQSCQQGPKRLQQVGAHSPATP*CQCERP
Trigger: GGGACGTTCGCATTGACAGCAAGGCGTGGCGGGAGA...GTGAGCACCAACCTGCTGCAGTCTCTTGGGCCCCTGCTGGCAGCTCTGCCACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
CDS-3UTR GCA 90 bp GCGACAGGATCTGCACAGAGCAGTGAGGGGCAGAGGACGCAGGGACCAGATGGGTCTCCCGCCACGCCTTaGTGTCAATGCGAACGTCCC +
Preference number: 4 (lower is better)
Translates to: ATGSAQSSEGQRTQGPDGSPATP*CQCERP
Trigger: GGGACGTTCGCATTGACAGCAAGGCGTGGCGGGAGA...CCCATCTGGTCCCTGCGTCCTCTGCCCCTCACTGCTCTGTGCAGATCCTGTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
CDS-3UTR GCA 90 bp GGCAGAGCTGCCAGCAGGGGCCCAAGAGACTGCAGCAGGTTGGTGCTCACAGTGTCTCCCGCCACGCCTTaGTGTCAATGCGAACGTCCC +
Preference number: 4 (lower is better)
Translates to: GRAASRGPRDCSRLVLTVSPATP*CQCERP
Trigger: GGGACGTTCGCATTGACAGCAAGGCGTGGCGGGAGA...CACTGTGAGCACCAACCTGCTGCAGTCTCTTGGGCCCCTGCTGGCAGCTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
CDS-3UTR GCA 90 bp CCCGTGAGCGGCTTCAGCAGCACTTTGGAGACAGGATCGCCTGCGTACAGCCCGTACCGCAGCTGCTTCTaGAGGGTCAGAGTCTCCCGC +
Preference number: 4 (lower is better)
Translates to: PVSGFSSTLETGSPAYSPYRSCF*RVRVSR
Trigger: GCGGGAGACTCTGACCCTGCAGAAGCAGCTGCGGTA...CGGGCTGTACGCAGGCGATCCTGTCTCCAAAGTGCTGCTGAAGCCGCTCACGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565503.5
ENST00000567283.5
CDS-3UTR GCA 90 bp GAAGCTGTTCCAGGAGGAGGGAGGGGCCTCGGTTTCTCCCGGGGCATGTGGGCAAAGCGGTACCGCAGCTaGTTCTGCAGGGTCAGAGTC +
Preference number: 4 (lower is better)
Translates to: EAVPGGGRGLGFSRGMWAKRYRS*FCRVRV
Trigger: GACTCTGACCCTGCAGAAGCAGCTGCGGTACCGCTT...TGCCCACATGCCCCGGGAGAAACCGAGGCCCCTCCCTCCTCCTGGAACAGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
CDS-3UTR GCA 90 bp GCGACAGGATCTGCACAGAGCAGTGAGGGGCAGAGGACGCAGGGACCAGATGGGAGCACCTGTACGCGCTaGCGGCGGCTGCCTTGTTTA +
Preference number: 4 (lower is better)
Translates to: ATGSAQSSEGQRTQGPDGSTCTR*RRLPCL
Trigger: TAAACAAGGCAGCCGCCGGCAGCGCGTACAGGTGCT...CCCATCTGGTCCCTGCGTCCTCTGCCCCTCACTGCTCTGTGCAGATCCTGTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp AGGACGCAGGGACCAGATGGGTCTCCCAGGCCAGGTGAGCCCAGAACGGCCCTTGGGTTCTCACAACCCTaGGAGCCCTCGATGCACATG +
Preference number: 4 (lower is better)
Translates to: RTQGPDGSPRPGEPRTALGFSQP*EPSMHM
Trigger: CATGTGCATCGAGGGCTCGCAGGGTTGTGAGAACCC...AAGGGCCGTTCTGGGCTCACCTGGCCTGGGAGACCCATCTGGTCCCTGCGTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000567114.5
CDS-3UTR GCA 90 bp GGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCCAAGGAGACAGGATCGCCTaGGTACAGCCCGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: GCGMGDRGGGTWQTHSSQGDRIA*VQPVFQ
Trigger: CTGGAACACGGGCTGTACGCAGGCGATCCTGTCTCC...TTGGGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp GCGACAGGATCTGCACAGAGCAGTGAGGGGCAGAGGACGCAGGGACCAGATGGGGGAGACAGGATCGCCTaGGTACAGCCCGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: ATGSAQSSEGQRTQGPDGGDRIA*VQPVFQ
Trigger: CTGGAACACGGGCTGTACGCAGGCGATCCTGTCTCC...CCCATCTGGTCCCTGCGTCCTCTGCCCCTCACTGCTCTGTGCAGATCCTGTCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp CAGCAGCACTTTGGAGACAGGATCGCCTGCGTACAGCCCGTGTTCCAGAACCACGGTGGCCCAGGGCACTaGAGTGCACGCGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: QQHFGDRIACVQPVFQNHGGPGH*SARAAG
Trigger: ACCAGCTGCGCGTGCACTGCAGTGCCCTGGGCCACC...GTGGTTCTGGAACACGGGCTGTACGCAGGCGATCCTGTCTCCAAAGTGCTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567283.5
CDS-3UTR GCA 90 bp GCCCAGGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTAGGGGCCCAAGAGACTaGAGCAGGTTGGTGCTCACA +
Preference number: 4 (lower is better)
Translates to: AQVVAWGTEEVGPGRPTARGPRD*SRLVLT
Trigger: TGTGAGCACCAACCTGCTGCAGTCTCTTGGGCCCCT...AGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACCTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp TTTGGGTTCTCACAACCCTGCGAGCCCTCGATGCACATGGTGTGGGCCCGGCCCGGCTCCGGTACACGATaGACAGGTTCTCCACGCTGC +
Preference number: 4 (lower is better)
Translates to: FGFSQPCEPSMHMVWARPGSGTR*TGSPRC
Trigger: GCAGCGTGGAGAACCTGTCCATCGTGTACCGGAGCC...GGGCCGGGCCCACACCATGTGCATCGAGGGCTCGCAGGGTTGTGAGAACCCAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565503.5
CDS-3UTR CCA 90 bp CATCATTCTGAACGGCCGGTCCTCCCGGCCCGAGACTTCTCCGTAGGTCAGGTCCGCACAGCGCCCCGCTaGTGGAGAAATCCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: HHSERPVLPARDFSVGQVRTAPR*WRNPAG
Trigger: ACCAGCTGGATTTCTCCACCAGCGGGGCGCTGTGCG...GACCTGACCTACGGAGAAGTCTCGGGCCGGGAGGACCGGCCGTTCAGAATGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562070.1
ENST00000565809.5
ENST00000567283.5
CDS-3UTR CCA 90 bp GCGACAGGATCTGCACAGAGCAGTGAGGGGCAGAGGACGCAGGGACCAGATGGGGTTACCCGGCTCTCCTaGATGTGCCCCCGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: ATGSAQSSEGQRTQGPDGVTRLS*MCPRSN
Trigger: ATTGCTGCGGGGGCACATCCAGGAGAGCCGGGTAAC...CCCATCTGGTCCCTGCGTCCTCTGCCCCTCACTGCTCTGTGCAGATCCTGTCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000567114.5
CDS-3UTR CCA 90 bp TGTCCGGCCTGCGGGATGAGGGCGGTGCCGGATCAAGCTGGGAGCGGGGCCGATGAGATCTGTGAGGCTTaGCTTTGGGTTCTCACAACC +
Preference number: 4 (lower is better)
Translates to: CPACGMRAVPDQAGSGADEICEA*LWVLTT
Trigger: GGTTGTGAGAACCCAAAGCCAAGCCTCACAGATCTC...ATCGGCCCCGCTCCCAGCTTGATCCGGCACCGCCCTCATCCCGCAGGCCGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562070.1
CDS-3UTR CCA 90 bp ATGTGGGCAGGAAGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTGCGGGAGATCTGTGAGGCTTaGCTTTGGGTTCTCACAACC +
Preference number: 4 (lower is better)
Translates to: MWAGRPSGSRISPTAAVREICEA*LWVLTT
Trigger: GGTTGTGAGAACCCAAAGCCAAGCCTCACAGATCTC...CCGCACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCTTCCTGCCCACAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp AAGGCACACGCAGCCGGGCCTGCAGACTCGAGCCCAGCAGGGACCATTAGGTCTAAGGCCTGCACGAGCTaGTCCAGCGACTGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: KAHAAGPADSSPAGTIRSKACTS*SSDCSS
Trigger: ACTGCTGCAGTCGCTGGACCAGCTCGTGCAGGCCTT...AGACCTAATGGTCCCTGCTGGGCTCGAGTCTGCAGGCCCGGCTGCGTGTGCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp AAGCTGGGGTCCCGGAGGCAGAGTGACAATGCATGGCTGTGTGGGAGCCAGGCAAGTGGATCTGAGGGATaGGCGTGCGTGGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: KLGSRRQSDNAWLCGSQASGSEG*ACVAGP
Trigger: AGGCCCTGCCACGCACGCCCATCCCTCAGATCCACT...TGCCTGGCTCCCACACAGCCATGCATTGTCACTCTGCCTCCGGGACCCCAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp GGCAGAGCTGCCAGCAGGGGCCCAAGAGACTGCAGCAGGTTGGTGCTCACAGTGAGAGGAGGTGGGACCTaGCAGACCCACAGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: GRAASRGPRDCSRLVLTVRGGGT*QTHSSQ
Trigger: TTGGGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCT...CACTGTGAGCACCAACCTGCTGCAGTCTCTTGGGCCCCTGCTGGCAGCTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp GTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCCAAGAGAGGAGGTGGGACCTaGCAGACCCACAGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: VVAWGTEEVGPGRPTAPKRGGGT*QTHSSQ
Trigger: TTGGGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCT...CTTGGGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp GACTTCTCCGTAGGTCAGGTCGCCCACCACGGGGTGGCCCAGGGCACTGCAGTGCTTGAAGCAGCCTCTTaGGGTGGAACTCTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: DFSVGQVAHHGVAQGTAVLEAAS*GGTLPV
Trigger: GACAGGGAGAGTTCCACCCCAAGAGGCTGCTTCAAG...CACTGCAGTGCCCTGGGCCACCCCGTGGTGGGCGACCTGACCTACGGAGAAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562070.1
CDS-3UTR CCA 90 bp CTCCCGGCCCGAGACTTCTCCGTAGGTCAGGTCGCCCACCACGGGGTGGCCCAGTGTGAGGCTTGGCTTTaGGTTCTCACAACCAATGCC +
Preference number: 4 (lower is better)
Translates to: LPARDFSVGQVAHHGVAQCEAWL*VLTTNA
Trigger: GGCATTGGTTGTGAGAACCCAAAGCCAAGCCTCACA...CTGGGCCACCCCGTGGTGGGCGACCTGACCTACGGAGAAGTCTCGGGCCGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565809.5
CDS-3UTR TCA 90 bp GTTGGTGCTCACAGTGGATCTGAGGGATGGGCGTGCGTGGCAGGGCCTTGGCCATGCCAATGGCATGGCTaGTGGTTACCCGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: VGAHSGSEGWACVAGPWPCQWHG*WLPGSP
Trigger: AGGAGAGCCGGGTAACCATCAGCCATGCCATTGGCA...TGGCCAAGGCCCTGCCACGCACGCCCATCCCTCAGATCCACTGTGAGCACCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000567114.5
CDS-3UTR TCA 90 bp AAGGCACACGCAGCCGGGCCTGCAGACTCGAGCCCAGCAGGGACCATTAGGTCTTGCCAATGGCATGGCTaGTGGTTACCCGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: KAHAAGPADSSPAGTIRSCQWHG*WLPGSP
Trigger: AGGAGAGCCGGGTAACCATCAGCCATGCCATTGGCA...AGACCTAATGGTCCCTGCTGGGCTCGAGTCTGCAGGCCCGGCTGCGTGTGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000567114.5
CDS-3UTR TCA 90 bp GCTGTTCCAGGAGGAGGGAGGGGCCTCGGTTTCTCCCGGGGCATGTGGGCAGGAGAACCACGAGATCTGTaGGGCTTGGCTTTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: AVPGGGRGLGFSRGMWAGEPRDL*GLALGS
Trigger: AGAACCCAAAGCCAAGCCTCACAGATCTCGTGGTTC...TCCTGCCCACATGCCCCGGGAGAAACCGAGGCCCCTCCCTCCTCCTGGAACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp TGTTCCAGGAGGAGGGAGGGGCCTCGGTTTCTCCCGGGGCATGTGGGCAGGAAGCACCAAACACCACACTaGGCTCAGAATCCGGGCAGA +
Preference number: 4 (lower is better)
Translates to: CSRRREGPRFLPGHVGRKHQTPH*AQNPGR
Trigger: TCTGCCCGGATTCTGAGCTCAGTGTGGTGTTTGGTG...CTTCCTGCCCACATGCCCCGGGAGAAACCGAGGCCCCTCCCTCCTCCTGGAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp ATGTGGGCAGGAAGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTGCGGCTTGGAGCCAGTCACTaGACATTTATTTGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: MWAGRPSGSRISPTAAVRLGASH*TFIWSP
Trigger: GGGACTCCAAATAAATGTTCAGTGACTGGCTCCAAG...CCGCACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCTTCCTGCCCACAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000007264.7
ENST00000561734.5
CDS-3UTR TCA 90 bp GGTGTCCGTGGGGATGCGCAGGTAGAAAGCGTGCAGCATCATTCTGAACGGCCGTTGCCAGCTCTGCCCTaGTGCTCAGGGTGGCCCAAC +
Preference number: 4 (lower is better)
Translates to: GVRGDAQVESVQHHSERPLPALP*CSGWPN
Trigger: GTTGGGCCACCCTGAGCATCAGGGCAGAGCTGGCAA...CGGCCGTTCAGAATGATGCTGCACGCTTTCTACCTGCGCATCCCCACGGACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562070.1
CDS-3UTR GCA 90 bp CACACGCAGCCGGGCCTGCAGACTCGAGCCCAGCAGGGACCATTAGGTCTCGGGACGCCTTGCTGTCAATaGGAACGTCCCAGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: HTQPGLQTRAQQGPLGLGTPCCQ*ERPSAC
Trigger: ACAAGCACTGGGACGTTCGCATTGACAGCAAGGCGT...CCCGAGACCTAATGGTCCCTGCTGGGCTCGAGTCTGCAGGCCCGGCTGCGTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
CDS-3UTR GCA 90 bp GCAGACGCTCGCTCGCCCATCTCCCTAGAGTCCCGCTGTGCAGCTGACACCCCCACGCCTTGCTGTCAATaGGAACGTCCCAGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: ADARSPISLESRCAADTPTPCCQ*ERPSAC
Trigger: ACAAGCACTGGGACGTTCGCATTGACAGCAAGGCGT...GGGGGTGTCAGCTGCACAGCGGGACTCTAGGGAGATGGGCGAGCGAGCGTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
CDS-3UTR GCA 90 bp ACGTGGCAGAGCTGCCAGCAGGGGCCCAAGAGACTGCAGCAGGTTGGTGCTCACAAGCGGTACCGCAGCTaGTTCTGCAGGGTCAGAGTC +
Preference number: 4 (lower is better)
Translates to: TWQSCQQGPKRLQQVGAHKRYRS*FCRVRV
Trigger: GACTCTGACCCTGCAGAAGCAGCTGCGGTACCGCTT...GTGAGCACCAACCTGCTGCAGTCTCTTGGGCCCCTGCTGGCAGCTCTGCCACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
CDS-3UTR GCA 90 bp GCAGACCTCCACACACTCGGTGTCCGTGGGGATGCGCAGGTAGAAAGCGTGCAGAGCACCTGTACGCGCTaGCGGCGGCTGCCTTGTTTA +
Preference number: 4 (lower is better)
Translates to: ADLHTLGVRGDAQVESVQSTCTR*RRLPCL
Trigger: TAAACAAGGCAGCCGCCGGCAGCGCGTACAGGTGCT...CTGCACGCTTTCTACCTGCGCATCCCCACGGACACCGAGTGTGTGGAGGTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562070.1
ENST00000565809.5
ENST00000567283.5
CDS-3UTR GCA 90 bp GCAGACCTCCACACACTCGGTGTCCGTGGGGATGCGCAGGTAGAAAGCGTGCAGGTGCCCCCGCAGCAATaGCAGGTAAGCCTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: ADLHTLGVRGDAQVESVQVPPQQ*QVSLGH
Trigger: GTGACCAAGGCTTACCTGGCATTGCTGCGGGGGCAC...CTGCACGCTTTCTACCTGCGCATCCCCACGGACACCGAGTGTGTGGAGGTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562070.1
CDS-3UTR GCA 90 bp GGCAGAGCTGCCAGCAGGGGCCCAAGAGACTGCAGCAGGTTGGTGCTCACAGTGGGGTTCTCACAACCCTaGGAGCCCTCGATGCACATG +
Preference number: 4 (lower is better)
Translates to: GRAASRGPRDCSRLVLTVGFSQP*EPSMHM
Trigger: CATGTGCATCGAGGGCTCGCAGGGTTGTGAGAACCC...CACTGTGAGCACCAACCTGCTGCAGTCTCTTGGGCCCCTGCTGGCAGCTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000567114.5
CDS-3UTR GCA 90 bp TATTTGGAGTCCCTGGAGCCCTGCTGTAGCCAGGAGCCCAGGTTGTGGCATGGGGGAAGGGGTCAGGCGTaGAGACCTCCACACACTCGG +
Preference number: 4 (lower is better)
Translates to: YLESLEPCCSQEPRLWHGGRGQA*RPPHTR
Trigger: CCGAGTGTGTGGAGGTCTGCACGCCTGACCCCTTCC...CCCATGCCACAACCTGGGCTCCTGGCTACAGCAGGGCTCCAGGGACTCCAAATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
CDS-3UTR GCA 90 bp GCTGTAGCCAGGAGCCCAGGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCCTGACCAACCCCTGTaGACCAAACACCACACTGAG +
Preference number: 4 (lower is better)
Translates to: AVARSPGCGMGDRGGGTWPDQPL*TKHHTE
Trigger: CTCAGTGTGGTGTTTGGTGCACAGGGGTTGGTCAGG...CCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACCTGGGCTCCTGGCTACAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp AAGGCACACGCAGCCGGGCCTGCAGACTCGAGCCCAGCAGGGACCATTAGGTCTAGGGGCCCAAGAGACTaGAGCAGGTTGGTGCTCACA +
Preference number: 4 (lower is better)
Translates to: KAHAAGPADSSPAGTIRSRGPRD*SRLVLT
Trigger: TGTGAGCACCAACCTGCTGCAGTCTCTTGGGCCCCT...AGACCTAATGGTCCCTGCTGGGCTCGAGTCTGCAGGCCCGGCTGCGTGTGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp GTTGGTGCTCACAGTGGATCTGAGGGATGGGCGTGCGTGGCAGGGCCTTGGCCAGCCCTACTGTGCACCTaGATCCTCAGTCCCCGAGAT +
Preference number: 4 (lower is better)
Translates to: VGAHSGSEGWACVAGPWPALLCT*ILSPRD
Trigger: ATCTCGGGGACTGAGGATGCAGGTGCACAGTAGGGC...TGGCCAAGGCCCTGCCACGCACGCCCATCCCTCAGATCCACTGTGAGCACCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561734.5
CDS-3UTR CCA 90 bp GACAGGATCGCCTGCGTACAGCCCGTGTTCCAGAACCACGAGATCTGTGAGGCTGTTCTCCACGCTGCCTaGCTCCATGGCCGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: DRIACVQPVFQNHEICEAVLHAA*LHGRPA
Trigger: AGCAGGCCGGCCATGGAGCCAGGCAGCGTGGAGAAC...AGCCTCACAGATCTCGTGGTTCTGGAACACGGGCTGTACGCAGGCGATCCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565503.5
ENST00000567283.5
CDS-3UTR CCA 90 bp TGGTGTGTCCGGCCCGTGAGCGGCTTCAGCAGCACTTTGGAGACAGGATCGCCTGGCTCCGGTACACGATaGACAGGTTCTCCACGCTGC +
Preference number: 4 (lower is better)
Translates to: WCVRPVSGFSSTLETGSPGSGTR*TGSPRC
Trigger: GCAGCGTGGAGAACCTGTCCATCGTGTACCGGAGCC...AGGCGATCCTGTCTCCAAAGTGCTGCTGAAGCCGCTCACGGGCCGGACACACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567283.5
CDS-3UTR CCA 90 bp TATTTGGAGTCCCTGGAGCCCTGCTGTAGCCAGGAGCCCAGGTTGTGGCATGGGCGCACAGCGCCCCGCTaGTGGAGAAATCCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: YLESLEPCCSQEPRLWHGRTAPR*WRNPAG
Trigger: ACCAGCTGGATTTCTCCACCAGCGGGGCGCTGTGCG...CCCATGCCACAACCTGGGCTCCTGGCTACAGCAGGGCTCCAGGGACTCCAAATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
CDS-3UTR CCA 90 bp GAAGCTGTTCCAGGAGGAGGGAGGGGCCTCGGTTTCTCCCGGGGCATGTGGGCATTCCTGCCAATGGCATaGCTGATGGTTACCCGGCTC +
Preference number: 4 (lower is better)
Translates to: EAVPGGGRGLGFSRGMWAFLPMA*LMVTRL
Trigger: GAGCCGGGTAACCATCAGCCATGCCATTGGCAGGAA...TGCCCACATGCCCCGGGAGAAACCGAGGCCCCTCCCTCCTCCTGGAACAGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000567114.5
CDS-3UTR CCA 90 bp CTTTGGAGACAGGATCGCCTGCGTACAGCCCGTGTTCCAGAACCACGAGATCTGAGCCCTCGATGCACATaGTGTGGGCCCGGCCCTCCG +
Preference number: 4 (lower is better)
Translates to: LWRQDRLRTARVPEPRDLSPRCT*CGPGPP
Trigger: CGGAGGGCCGGGCCCACACCATGTGCATCGAGGGCT...CAGATCTCGTGGTTCTGGAACACGGGCTGTACGCAGGCGATCCTGTCTCCAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565503.5
ENST00000567283.5
CDS-3UTR CCA 90 bp CCAGGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCGCTTCAGCAGCACTTTaGAGACAGGATCGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: PGCGMGDRGGGTWQTHSSASAAL*RQDRLR
Trigger: ACGCAGGCGATCCTGTCTCCAAAGTGCTGCTGAAGC...GGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp GGCAGAGCTGCCAGCAGGGGCCCAAGAGACTGCAGCAGGTTGGTGCTCACAGTGCACACTCGGTGTCCGTaGGGATGCGCAGGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: GRAASRGPRDCSRLVLTVHTRCP*GCAGRK
Trigger: CTTTCTACCTGCGCATCCCCACGGACACCGAGTGTG...CACTGTGAGCACCAACCTGCTGCAGTCTCTTGGGCCCCTGCTGGCAGCTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp AAGGCACACGCAGCCGGGCCTGCAGACTCGAGCCCAGCAGGGACCATTAGGTCTGCCTATCCCAAAACCTaGCCCTGCCTCTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: KAHAAGPADSSPAGTIRSAYPKT*PCLFLR
Trigger: CCTCAGGAAGAGGCAGGGCCAGGTTTTGGGATAGGC...AGACCTAATGGTCCCTGCTGGGCTCGAGTCTGCAGGCCCGGCTGCGTGTGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp TATTTGGAGTCCCTGGAGCCCTGCTGTAGCCAGGAGCCCAGGTTGTGGCATGGGAGTGGATCTGAGGGATaGGCGTGCGTGGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: YLESLEPCCSQEPRLWHGSGSEG*ACVAGP
Trigger: AGGCCCTGCCACGCACGCCCATCCCTCAGATCCACT...CCCATGCCACAACCTGGGCTCCTGGCTACAGCAGGGCTCCAGGGACTCCAAATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
CDS-3UTR CCA 90 bp GGTGTCCGTGGGGATGCGCAGGTAGAAAGCGTGCAGCATCATTCTGAACGGCCGCAGGAGCCCAGGTTGTaGCATGGGGGACAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GVRGDAQVESVQHHSERPQEPRL*HGGQRR
Trigger: CCTCCTCTGTCCCCCATGCCACAACCTGGGCTCCTG...CGGCCGTTCAGAATGATGCTGCACGCTTTCTACCTGCGCATCCCCACGGACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565809.5
CDS-3UTR CCA 90 bp GCAGCCGGGCCTGCAGACTCGAGCCCAGCAGGGACCATTAGGTCTCGGGAGGAGTTTATTTGGAGTCCCTaGAGCCCTGCTGTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: AAGPADSSPAGTIRSREEFIWSP*SPAVAR
Trigger: CCTGGCTACAGCAGGGCTCCAGGGACTCCAAATAAA...CTCCTCCCGAGACCTAATGGTCCCTGCTGGGCTCGAGTCTGCAGGCCCGGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
CDS-3UTR CCA 90 bp ACGTGGCAGAGCTGCCAGCAGGGGCCCAAGAGACTGCAGCAGGTTGGTGCTCACGTGGAGAAATCCAGCTaGTGGCAGAACCTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: TWQSCQQGPKRLQQVGAHVEKSS*WQNLLP
Trigger: CGGCAGCAGGTTCTGCCACCAGCTGGATTTCTCCAC...GTGAGCACCAACCTGCTGCAGTCTCTTGGGCCCCTGCTGGCAGCTCTGCCACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567114.5
CDS-3UTR TCA 90 bp AAGCTGGGGTCCCGGAGGCAGAGTGACAATGCATGGCTGTGTGGGAGCCAGGCATGCCAATGGCATGGCTaGTGGTTACCCGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: KLGSRRQSDNAWLCGSQACQWHG*WLPGSP
Trigger: AGGAGAGCCGGGTAACCATCAGCCATGCCATTGGCA...TGCCTGGCTCCCACACAGCCATGCATTGTCACTCTGCCTCCGGGACCCCAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000567114.5
CDS-3UTR TCA 90 bp GAAGCTGTTCCAGGAGGAGGGAGGGGCCTCGGTTTCTCCCGGGGCATGTGGGCAGAACCACGAGATCTGTaGGGCTTGGCTTTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: EAVPGGGRGLGFSRGMWAEPRDL*GLALGS
Trigger: AGAACCCAAAGCCAAGCCTCACAGATCTCGTGGTTC...TGCCCACATGCCCCGGGAGAAACCGAGGCCCCTCCCTCCTCCTGGAACAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp GGTGTCCGTGGGGATGCGCAGGTAGAAAGCGTGCAGCATCATTCTGAACGGCCGGTCCCGGAGGCAGAGTaGCAATGCATGGCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: GVRGDAQVESVQHHSERPVPEAE*QCMAVW
Trigger: CCACACAGCCATGCATTGTCACTCTGCCTCCGGGAC...CGGCCGTTCAGAATGATGCTGCACGCTTTCTACCTGCGCATCCCCACGGACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565809.5
CDS-3UTR TCA 90 bp CTCGGTGTCCGTGGGGATGCGCAGGTAGAAAGCGTGCAGCATCATTCTGAACGGTCAGGTCACCACTGGTaGGGACAGGGCCAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: LGVRGDAQVESVQHHSERSGHHW*GQGQGG
Trigger: ACCACCCTGGCCCTGTCCTCACCAGTGGTGACCTGA...CCGTTCAGAATGATGCTGCACGCTTTCTACCTGCGCATCCCCACGGACACCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562070.1
CDS-3UTR GCA 90 bp ACAGGATCGCCTGCGTACAGCCCGTGTTCCAGAACCACGAGATCTGTGAGGCTTACAGGTTCTCCACGCTaGCTGGCTCCATGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: TGSPAYSPCSRTTRSVRLTGSPR*LAPWPA
Trigger: GGCCGGCCATGGAGCCAGGCAGCGTGGAGAACCTGT...AAGCCTCACAGATCTCGTGGTTCTGGAACACGGGCTGTACGCAGGCGATCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565503.5
ENST00000567283.5
CDS-3UTR GCA 90 bp GAAGCTGTTCCAGGAGGAGGGAGGGGCCTCGGTTTCTCCCGGGGCATGTGGGCAATGCGAACGTCCCAGTaGTTGTTGACCACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: EAVPGGGRGLGFSRGMWAMRTSQ*LLTTRK
Trigger: CTTCCTGGTGGTCAACAAGCACTGGGACGTTCGCAT...TGCCCACATGCCCCGGGAGAAACCGAGGCCCCTCCCTCCTCCTGGAACAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
CDS-3UTR GCA 90 bp GCTGTAGCCAGGAGCCCAGGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGATGCGAACGTCCCAGTaGTTGTTGACCACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: AVARSPGCGMGDRGGGTWMRTSQ*LLTTRK
Trigger: CTTCCTGGTGGTCAACAAGCACTGGGACGTTCGCAT...CCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACCTGGGCTCCTGGCTACAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
CDS-3UTR GCA 90 bp AGCGTGCAGCATCATTCTGAACGGCCGGTCCTCCCGGCCCGAGACTTCTCCGTAGGGTTCTCACAACCCTaGGAGCCCTCGATGCACATG +
Preference number: 4 (lower is better)
Translates to: SVQHHSERPVLPARDFSVGFSQP*EPSMHM
Trigger: CATGTGCATCGAGGGCTCGCAGGGTTGTGAGAACCC...TACGGAGAAGTCTCGGGCCGGGAGGACCGGCCGTTCAGAATGATGCTGCACGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562070.1
ENST00000567283.5
CDS-3UTR GCA 90 bp GAGCGGCTTCAGCAGCACTTTGGAGACAGGATCGCCTGCGTACAGCCCGTGTTCGGAGACAGGATCGCCTaGGTACAGCCCGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: ERLQQHFGDRIACVQPVFGDRIA*VQPVFQ
Trigger: CTGGAACACGGGCTGTACGCAGGCGATCCTGTCTCC...GAACACGGGCTGTACGCAGGCGATCCTGTCTCCAAAGTGCTGCTGAAGCCGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565503.5
ENST00000567283.5
CDS-3UTR GCA 90 bp GGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCCAACCTGACCAACCCCTGTaGACCAAACACCACACTGAG +
Preference number: 4 (lower is better)
Translates to: GCGMGDRGGGTWQTHSSQPDQPL*TKHHTE
Trigger: CTCAGTGTGGTGTTTGGTGCACAGGGGTTGGTCAGG...TTGGGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp GGCAGAGCTGCCAGCAGGGGCCCAAGAGACTGCAGCAGGTTGGTGCTCACAGTGCCTGACCAACCCCTGTaGACCAAACACCACACTGAG +
Preference number: 4 (lower is better)
Translates to: GRAASRGPRDCSRLVLTVPDQPL*TKHHTE
Trigger: CTCAGTGTGGTGTTTGGTGCACAGGGGTTGGTCAGG...CACTGTGAGCACCAACCTGCTGCAGTCTCTTGGGCCCCTGCTGGCAGCTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR GCA 90 bp GCAGCCGGGCCTGCAGACTCGAGCCCAGCAGGGACCATTAGGTCTCGGGAGGAGGGTTCTCACAACCAATaGCAGGTAAGCCTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: AAGPADSSPAGTIRSREEGSHNQ*QVSLGH
Trigger: GTGACCAAGGCTTACCTGGCATTGGTTGTGAGAACC...CTCCTCCCGAGACCTAATGGTCCCTGCTGGGCTCGAGTCTGCAGGCCCGGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565809.5
CDS-3UTR CCA 90 bp GTTGGTGCTCACAGTGGATCTGAGGGATGGGCGTGCGTGGCAGGGCCTTGGCCATTCCTGCCAATGGCATaGCTGATGGTTACCCGGCTC +
Preference number: 4 (lower is better)
Translates to: VGAHSGSEGWACVAGPWPFLPMA*LMVTRL
Trigger: GAGCCGGGTAACCATCAGCCATGCCATTGGCAGGAA...TGGCCAAGGCCCTGCCACGCACGCCCATCCCTCAGATCCACTGTGAGCACCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000567114.5
CDS-3UTR CCA 90 bp GCACTTTGGAGACAGGATCGCCTGCGTACAGCCCGTGTTCCAGAACCACGAGATTCGATGCACATGGTGTaGGCCCGGCCCTCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: ALWRQDRLRTARVPEPRDSMHMV*ARPSVL
Trigger: CAGCACGGAGGGCCGGGCCCACACCATGTGCATCGA...ATCTCGTGGTTCTGGAACACGGGCTGTACGCAGGCGATCCTGTCTCCAAAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565503.5
ENST00000567283.5
CDS-3UTR CCA 90 bp CGAGCCCTCGATGCACATGGTGTGGGCCCGGCCCTCCGTGCTGTTCCTGCCAATTGTGAGGCTTGGCTTTaGGTTCTCACAACCCTGCGA +
Preference number: 4 (lower is better)
Translates to: RALDAHGVGPALRAVPANCEAWL*VLTTLR
Trigger: TCGCAGGGTTGTGAGAACCCAAAGCCAAGCCTCACA...ATTGGCAGGAACAGCACGGAGGGCCGGGCCCACACCATGTGCATCGAGGGCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565503.5
CDS-3UTR CCA 90 bp GAGCCGGAAGCTGTTCCAGGAGGAGGGAGGGGCCTCGGTTTCTCCCGGGGCATGGAGATCTGTGAGGCTTaGCTTTGGGTTCTCACAACC +
Preference number: 4 (lower is better)
Translates to: EPEAVPGGGRGLGFSRGMEICEA*LWVLTT
Trigger: GGTTGTGAGAACCCAAAGCCAAGCCTCACAGATCTC...CATGCCCCGGGAGAAACCGAGGCCCCTCCCTCCTCCTGGAACAGCTTCCGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp GTGACGTGGCAGAGCTGCCAGCAGGGGCCCAAGAGACTGCAGCAGGTTGGTGCTGCTTCAGCAGCACTTTaGAGACAGGATCGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: VTWQSCQQGPKRLQQVGAASAAL*RQDRLR
Trigger: ACGCAGGCGATCCTGTCTCCAAAGTGCTGCTGAAGC...AGCACCAACCTGCTGCAGTCTCTTGGGCCCCTGCTGGCAGCTCTGCCACGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp AAGGCACACGCAGCCGGGCCTGCAGACTCGAGCCCAGCAGGGACCATTAGGTCTCAGAGTGACAATGCATaGCTGTGTGGGAGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: KAHAAGPADSSPAGTIRSQSDNA*LCGSQA
Trigger: TGCCTGGCTCCCACACAGCCATGCATTGTCACTCTG...AGACCTAATGGTCCCTGCTGGGCTCGAGTCTGCAGGCCCGGCTGCGTGTGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp GAGACAGGATCGCCTGCGTACAGCCCGTGTTCCAGAACCACGAGATCTGTGAGGGTTACCCGGCTCTCCTaGATGTGCCCCCGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: ETGSPAYSPCSRTTRSVRVTRLS*MCPRSC
Trigger: ACAGCTGCGGGGGCACATCCAGGAGAGCCGGGTAAC...CCTCACAGATCTCGTGGTTCTGGAACACGGGCTGTACGCAGGCGATCCTGTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565503.5
CDS-3UTR TCA 90 bp CTTCAGCAGCACTTTGGAGACAGGATCGCCTGCGTACAGCCCGTGTTCCAGAACCGTCCCAGTGCTTGTTaGCCACCAGGAAGTCGCGGC +
Preference number: 4 (lower is better)
Translates to: LQQHFGDRIACVQPVFQNRPSAC*PPGSRG
Trigger: GCCGCGACTTCCTGGTGGTCAACAAGCACTGGGACG...GTTCTGGAACACGGGCTGTACGCAGGCGATCCTGTCTCCAAAGTGCTGCTGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565503.5
ENST00000567283.5
CDS-3UTR TCA 90 bp CCTCCACACACTCGGTGTCCGTGGGGATGCGCAGGTAGAAAGCGTGCAGCATCATGCCAATGGCATGGCTaGTGGTTACCCGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: PPHTRCPWGCAGRKRAASCQWHG*WLPGSP
Trigger: AGGAGAGCCGGGTAACCATCAGCCATGCCATTGGCA...TGATGCTGCACGCTTTCTACCTGCGCATCCCCACGGACACCGAGTGTGTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562070.1
ENST00000567283.5
CDS-3UTR TCA 90 bp GTCCGGCCCGTGAGCGGCTTCAGCAGCACTTTGGAGACAGGATCGCCTGCGTACGAACCACGAGATCTGTaGGGCTTGGCTTTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: VRPVSGFSSTLETGSPAYEPRDL*GLALGS
Trigger: AGAACCCAAAGCCAAGCCTCACAGATCTCGTGGTTC...GTACGCAGGCGATCCTGTCTCCAAAGTGCTGCTGAAGCCGCTCACGGGCCGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567283.5
CDS-3UTR GCA 90 bp CTCGATGCACATGGTGTGGGCCCGGCCCTCCGTGCTGTTCCTGCCAATGGCATGACGCCTTGCTGTCAATaGGAACGTCCCAGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: LDAHGVGPALRAVPANGMTPCCQ*ERPSAC
Trigger: ACAAGCACTGGGACGTTCGCATTGACAGCAAGGCGT...CATGCCATTGGCAGGAACAGCACGGAGGGCCGGGCCCACACCATGTGCATCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565503.5
CDS-3UTR GCA 90 bp GCAGCACTTTGGAGACAGGATCGCCTGCGTACAGCCCGTGTTCCAGAACCACGATCTCCCGCCACGCCTTaGTGTCAATGCGAACGTCCC +
Preference number: 4 (lower is better)
Translates to: AALWRQDRLRTARVPEPRSPATP*CQCERP
Trigger: GGGACGTTCGCATTGACAGCAAGGCGTGGCGGGAGA...TCGTGGTTCTGGAACACGGGCTGTACGCAGGCGATCCTGTCTCCAAAGTGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565503.5
ENST00000567283.5
CDS-3UTR GCA 90 bp CTCGGTGTCCGTGGGGATGCGCAGGTAGAAAGCGTGCAGCATCATTCTGAACGGTCTCCCGCCACGCCTTaGTGTCAATGCGAACGTCCC +
Preference number: 4 (lower is better)
Translates to: LGVRGDAQVESVQHHSERSPATP*CQCERP
Trigger: GGGACGTTCGCATTGACAGCAAGGCGTGGCGGGAGA...CCGTTCAGAATGATGCTGCACGCTTTCTACCTGCGCATCCCCACGGACACCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565809.5
ENST00000567283.5
CDS-3UTR GCA 90 bp CTCGGTGTCCGTGGGGATGCGCAGGTAGAAAGCGTGCAGCATCATTCTGAACGGGGAGACAGGATCGCCTaGGTACAGCCCGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: LGVRGDAQVESVQHHSERGDRIA*VQPVFQ
Trigger: CTGGAACACGGGCTGTACGCAGGCGATCCTGTCTCC...CCGTTCAGAATGATGCTGCACGCTTTCTACCTGCGCATCCCCACGGACACCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000562070.1
ENST00000565809.5
ENST00000567283.5
CDS-3UTR GCA 90 bp TATTTGGAGTCCCTGGAGCCCTGCTGTAGCCAGGAGCCCAGGTTGTGGCATGGGAGGGGCCCAAGAGACTaGAGCAGGTTGGTGCTCACA +
Preference number: 4 (lower is better)
Translates to: YLESLEPCCSQEPRLWHGRGPRD*SRLVLT
Trigger: TGTGAGCACCAACCTGCTGCAGTCTCTTGGGCCCCT...CCCATGCCACAACCTGGGCTCCTGGCTACAGCAGGGCTCCAGGGACTCCAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
CDS-3UTR GCA 90 bp AAAGCGTGCAGCATCATTCTGAACGGCCGGTCCTCCCGGCCCGAGACTTCTCCGAGCTTCGTGGCCCTGTaGCTCAGTTTCCCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: KACSIILNGRSSRPETSPSFVAL*LSFPSV
Trigger: GACAGAAGGGAAACTGAGGCACAGGGCCACGAAGCT...CGGAGAAGTCTCGGGCCGGGAGGACCGGCCGTTCAGAATGATGCTGCACGCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562070.1
CDS-3UTR GCA 90 bp GCTTCAGCAGCACTTTGGAGACAGGATCGCCTGCGTACAGCCCGTGTTCCAGAACGCAGCTGTACGCGCTaGCGGCGGCTGCCTTGTTTA +
Preference number: 4 (lower is better)
Translates to: ASAALWRQDRLRTARVPERSCTR*RRLPCL
Trigger: TAAACAAGGCAGCCGCCGGCAGCGCGTACAGCTGCG...TTCTGGAACACGGGCTGTACGCAGGCGATCCTGTCTCCAAAGTGCTGCTGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565503.5
CDS-3UTR CCA 90 bp CTTCAGCAGCACTTTGGAGACAGGATCGCCTGCGTACAGCCCGTGTTCCAGAACCGCACAGCGCCCCGCTaGTGGAGAAATCCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LQQHFGDRIACVQPVFQNRTAPR*WRNPAG
Trigger: ACCAGCTGGATTTCTCCACCAGCGGGGCGCTGTGCG...GTTCTGGAACACGGGCTGTACGCAGGCGATCCTGTCTCCAAAGTGCTGCTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565503.5
ENST00000567283.5
CDS-3UTR CCA 90 bp GTTGGTGCTCACAGTGGATCTGAGGGATGGGCGTGCGTGGCAGGGCCTTGGCCATGTGAGGCTTGGCTTTaGGTTCTCACAACCCTGCGA +
Preference number: 4 (lower is better)
Translates to: VGAHSGSEGWACVAGPWPCEAWL*VLTTLR
Trigger: TCGCAGGGTTGTGAGAACCCAAAGCCAAGCCTCACA...TGGCCAAGGCCCTGCCACGCACGCCCATCCCTCAGATCCACTGTGAGCACCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000567114.5
CDS-3UTR CCA 90 bp ACGTGGCAGAGCTGCCAGCAGGGGCCCAAGAGACTGCAGCAGGTTGGTGCTCACTGTGAGGCTTGGCTTTaGGTTCTCACAACCCTGCGA +
Preference number: 4 (lower is better)
Translates to: TWQSCQQGPKRLQQVGAHCEAWL*VLTTLR
Trigger: TCGCAGGGTTGTGAGAACCCAAAGCCAAGCCTCACA...GTGAGCACCAACCTGCTGCAGTCTCTTGGGCCCCTGCTGGCAGCTCTGCCACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000567114.5
CDS-3UTR CCA 90 bp AGGGGCAGAGGACGCAGGGACCAGATGGGTCTCCCAGGCCAGGTGAGCCCAGAAGAGATCTGTGAGGCTTaGCTTTGGGTTCTCACAACC +
Preference number: 4 (lower is better)
Translates to: RGRGRRDQMGLPGQVSPEEICEA*LWVLTT
Trigger: GGTTGTGAGAACCCAAAGCCAAGCCTCACAGATCTC...TTCTGGGCTCACCTGGCCTGGGAGACCCATCTGGTCCCTGCGTCCTCTGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CCA 90 bp GCAGACCTCCACACACTCGGTGTCCGTGGGGATGCGCAGGTAGAAAGCGTGCAGGCTTCAGCAGCACTTTaGAGACAGGATCGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: ADLHTLGVRGDAQVESVQASAAL*RQDRLR
Trigger: ACGCAGGCGATCCTGTCTCCAAAGTGCTGCTGAAGC...CTGCACGCTTTCTACCTGCGCATCCCCACGGACACCGAGTGTGTGGAGGTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562070.1
ENST00000565809.5
ENST00000567283.5
CDS-3UTR CCA 90 bp GGCAGAGCTGCCAGCAGGGGCCCAAGAGACTGCAGCAGGTTGGTGCTCACAGTGTTTATTTGGAGTCCCTaGAGCCCTGCTGTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GRAASRGPRDCSRLVLTVFIWSP*SPAVAR
Trigger: CCTGGCTACAGCAGGGCTCCAGGGACTCCAAATAAA...CACTGTGAGCACCAACCTGCTGCAGTCTCTTGGGCCCCTGCTGGCAGCTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
CDS-3UTR CCA 90 bp ACTTTGGAGACAGGATCGCCTGCGTACAGCCCGTGTTCCAGAACCACGAGATCTGTTACCCGGCTCTCCTaGATGTGCCCCCGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: TLETGSPAYSPCSRTTRSVTRLS*MCPRSR
Trigger: CCTGCTGCGGGGGCACATCCAGGAGAGCCGGGTAAC...AGATCTCGTGGTTCTGGAACACGGGCTGTACGCAGGCGATCCTGTCTCCAAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567283.5
CDS-3UTR TCA 90 bp GCCTGCGTACAGCCCGTGTTCCAGAACCACGAGATCTGTGAGGCTTGGCTTTGGTGCCAATGGCATGGCTaGTGGTTACCCGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: ACVQPVFQNHEICEAWLWCQWHG*WLPGSP
Trigger: AGGAGAGCCGGGTAACCATCAGCCATGCCATTGGCA...CCAAAGCCAAGCCTCACAGATCTCGTGGTTCTGGAACACGGGCTGTACGCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565503.5
ENST00000567283.5
CDS-3UTR TCA 90 bp AGCGTGCAGCATCATTCTGAACGGCCGGTCCTCCCGGCCCGAGACTTCTCCGTAGAACCACGAGATCTGTaGGGCTTGGCTTTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: SVQHHSERPVLPARDFSVEPRDL*GLALGS
Trigger: AGAACCCAAAGCCAAGCCTCACAGATCTCGTGGTTC...TACGGAGAAGTCTCGGGCCGGGAGGACCGGCCGTTCAGAATGATGCTGCACGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562070.1
ENST00000565809.5
ENST00000567283.5
CDS-3UTR TCA 90 bp AAGCTGGGGTCCCGGAGGCAGAGTGACAATGCATGGCTGTGTGGGAGCCAGGCAGAACCACGAGATCTGTaGGGCTTGGCTTTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: KLGSRRQSDNAWLCGSQAEPRDL*GLALGS
Trigger: AGAACCCAAAGCCAAGCCTCACAGATCTCGTGGTTC...TGCCTGGCTCCCACACAGCCATGCATTGTCACTCTGCCTCCGGGACCCCAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR TCA 90 bp TATTTGGAGTCCCTGGAGCCCTGCTGTAGCCAGGAGCCCAGGTTGTGGCATGGGCACCAAACACCACACTaGGCTCAGAATCCGGGCAGA +
Preference number: 4 (lower is better)
Translates to: YLESLEPCCSQEPRLWHGHQTPH*AQNPGR
Trigger: TCTGCCCGGATTCTGAGCTCAGTGTGGTGTTTGGTG...CCCATGCCACAACCTGGGCTCCTGGCTACAGCAGGGCTCCAGGGACTCCAAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
CDS-3UTR TCA 90 bp CAGAGCAGTGAGGGGCAGAGGACGCAGGGACCAGATGGGTCTCCCAGGCCAGGTCTTGGAGCCAGTCACTaGACATTTATTTGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: QSSEGQRTQGPDGSPRPGLGASH*TFIWSP
Trigger: GGGACTCCAAATAAATGTTCAGTGACTGGCTCCAAG...ACCTGGCCTGGGAGACCCATCTGGTCCCTGCGTCCTCTGCCCCTCACTGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000007264.7
ENST00000561734.5
CDS-3UTR GCA 90 bp ACAGGATCGCCTGCGTACAGCCCGTGTTCCAGAACCACGAGATCTGTGAGGCTTGGAGACAGGATCGCCTaGGTACAGCCCGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: TGSPAYSPCSRTTRSVRLGDRIA*VQPVFQ
Trigger: CTGGAACACGGGCTGTACGCAGGCGATCCTGTCTCC...AAGCCTCACAGATCTCGTGGTTCTGGAACACGGGCTGTACGCAGGCGATCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565503.5
ENST00000567283.5
CDS-3UTR GCA 90 bp CTCGGTGTCCGTGGGGATGCGCAGGTAGAAAGCGTGCAGCATCATTCTGAACGGACAGGGCCAGGGTGGTaGTCGGTCCTGGAGAATCTA +
Preference number: 4 (lower is better)
Translates to: LGVRGDAQVESVQHHSERTGPGW*SVLENL
Trigger: TAGATTCTCCAGGACCGAGCACCACCCTGGCCCTGT...CCGTTCAGAATGATGCTGCACGCTTTCTACCTGCGCATCCCCACGGACACCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562070.1
CDS-3UTR CCA 90 bp TGCGTACAGCCCGTGTTCCAGAACCACGAGATCTGTGAGGCTTGGCTTTGGGTTACAGCGCCCCGCTGGTaGAGAAATCCAGCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: CVQPVFQNHEICEAWLWVTAPRW*RNPAGG
Trigger: GCCACCAGCTGGATTTCTCCACCAGCGGGGCGCTGT...AACCCAAAGCCAAGCCTCACAGATCTCGTGGTTCTGGAACACGGGCTGTACGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565503.5
ENST00000567283.5
CDS-3UTR CCA 90 bp GGTGTCCGTGGGGATGCGCAGGTAGAAAGCGTGCAGCATCATTCTGAACGGCCGGCTTCAGCAGCACTTTaGAGACAGGATCGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: GVRGDAQVESVQHHSERPASAAL*RQDRLR
Trigger: ACGCAGGCGATCCTGTCTCCAAAGTGCTGCTGAAGC...CGGCCGTTCAGAATGATGCTGCACGCTTTCTACCTGCGCATCCCCACGGACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562070.1
ENST00000565809.5
ENST00000567283.5
CDS-3UTR CCA 90 bp TATTTGGAGTCCCTGGAGCCCTGCTGTAGCCAGGAGCCCAGGTTGTGGCATGGGCAGAGTGACAATGCATaGCTGTGTGGGAGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: YLESLEPCCSQEPRLWHGQSDNA*LCGSQA
Trigger: TGCCTGGCTCCCACACAGCCATGCATTGTCACTCTG...CCCATGCCACAACCTGGGCTCCTGGCTACAGCAGGGCTCCAGGGACTCCAAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
CDS-3UTR CCA 90 bp AAGCTGGGGTCCCGGAGGCAGAGTGACAATGCATGGCTGTGTGGGAGCCAGGCATTTATTTGGAGTCCCTaGAGCCCTGCTGTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: KLGSRRQSDNAWLCGSQAFIWSP*SPAVAR
Trigger: CCTGGCTACAGCAGGGCTCCAGGGACTCCAAATAAA...TGCCTGGCTCCCACACAGCCATGCATTGTCACTCTGCCTCCGGGACCCCAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
CDS-3UTR GCA 90 bp CGGCTTCAGCAGCACTTTGGAGACAGGATCGCCTGCGTACAGCCCGTGTTCCAGACGCCTTGCTGTCAATaGGAACGTCCCAGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: RLQQHFGDRIACVQPVFQTPCCQ*ERPSAC
Trigger: ACAAGCACTGGGACGTTCGCATTGACAGCAAGGCGT...CTGGAACACGGGCTGTACGCAGGCGATCCTGTCTCCAAAGTGCTGCTGAAGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565503.5
ENST00000567283.5
CDS-3UTR GCA 90 bp GCTTCAGCAGCACTTTGGAGACAGGATCGCCTGCGTACAGCCCGTGTTCCAGAAGGGTTCTCACAACCCTaGGAGCCCTCGATGCACATG +
Preference number: 4 (lower is better)
Translates to: ASAALWRQDRLRTARVPEGFSQP*EPSMHM
Trigger: CATGTGCATCGAGGGCTCGCAGGGTTGTGAGAACCC...TTCTGGAACACGGGCTGTACGCAGGCGATCCTGTCTCCAAAGTGCTGCTGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565503.5
ENST00000567283.5
CDS-3UTR CCA 90 bp GCCTGCGTACAGCCCGTGTTCCAGAACCACGAGATCTGTGAGGCTTGGCTTTGGTTCCTGCCAATGGCATaGCTGATGGTTACCCGGCTC +
Preference number: 4 (lower is better)
Translates to: ACVQPVFQNHEICEAWLWFLPMA*LMVTRL
Trigger: GAGCCGGGTAACCATCAGCCATGCCATTGGCAGGAA...CCAAAGCCAAGCCTCACAGATCTCGTGGTTCTGGAACACGGGCTGTACGCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565503.5
ENST00000567283.5
CDS-3UTR CCA 90 bp CAGCATCATTCTGAACGGCCGGTCCTCCCGGCCCGAGACTTCTCCGTAGGTCAGGAGATCTGTGAGGCTTaGCTTTGGGTTCTCACAACC +
Preference number: 4 (lower is better)
Translates to: QHHSERPVLPARDFSVGQEICEA*LWVLTT
Trigger: GGTTGTGAGAACCCAAAGCCAAGCCTCACAGATCTC...CTGACCTACGGAGAAGTCTCGGGCCGGGAGGACCGGCCGTTCAGAATGATGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562070.1
ENST00000565809.5
ENST00000567283.5
CDS-3UTR CCA 90 bp GACAGGATCGCCTGCGTACAGCCCGTGTTCCAGAACCACGAGATCTGTGAGGCTGCTTCAGCAGCACTTTaGAGACAGGATCGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: DRIACVQPVFQNHEICEAASAAL*RQDRLR
Trigger: ACGCAGGCGATCCTGTCTCCAAAGTGCTGCTGAAGC...AGCCTCACAGATCTCGTGGTTCTGGAACACGGGCTGTACGCAGGCGATCCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565503.5
ENST00000567283.5
CDS-3UTR TCA 90 bp TCCAGAACCACGAGATCTGTGAGGCTTGGCTTTGGGTTCTCACAACCCTGCGAGTGCCAATGGCATGGCTaGTGGTTACCCGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: SRTTRSVRLGFGFSQPCECQWHG*WLPGSP
Trigger: AGGAGAGCCGGGTAACCATCAGCCATGCCATTGGCA...CTCGCAGGGTTGTGAGAACCCAAAGCCAAGCCTCACAGATCTCGTGGTTCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565503.5
CDS-3UTR TCA 90 bp GCAGCACTTTGGAGACAGGATCGCCTGCGTACAGCCCGTGTTCCAGAACCACGAGAACCACGAGATCTGTaGGGCTTGGCTTTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: AALWRQDRLRTARVPEPREPRDL*GLALGS
Trigger: AGAACCCAAAGCCAAGCCTCACAGATCTCGTGGTTC...TCGTGGTTCTGGAACACGGGCTGTACGCAGGCGATCCTGTCTCCAAAGTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565503.5
ENST00000567283.5
CDS-3UTR TCA 90 bp CTCGGTGTCCGTGGGGATGCGCAGGTAGAAAGCGTGCAGCATCATTCTGAACGGCCCTGTCCCCTGCCATaGGTGAGGATGACAGTATTT +
Preference number: 4 (lower is better)
Translates to: LGVRGDAQVESVQHHSERPCPLP*VRMTVF
Trigger: AAATACTGTCATCCTCACTCATGGCAGGGGACAGGG...CCGTTCAGAATGATGCTGCACGCTTTCTACCTGCGCATCCCCACGGACACCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562070.1
CDS-3UTR GCA 90 bp CAGCCCGTGTTCCAGAACCACGAGATCTGTGAGGCTTGGCTTTGGGTTCTCACAAAGCGGTACCGCAGCTaGTTCTGCAGGGTCAGAGTC +
Preference number: 4 (lower is better)
Translates to: QPVFQNHEICEAWLWVLTKRYRS*FCRVRV
Trigger: GACTCTGACCCTGCAGAAGCAGCTGCGGTACCGCTT...TGTGAGAACCCAAAGCCAAGCCTCACAGATCTCGTGGTTCTGGAACACGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565503.5
CDS-3UTR CCA 90 bp AGCACTTTGGAGACAGGATCGCCTGCGTACAGCCCGTGTTCCAGAACCACGAGATTCCTGCCAATGGCATaGCTGATGGTTACCCGGCTC +
Preference number: 4 (lower is better)
Translates to: STLETGSPAYSPCSRTTRFLPMA*LMVTRL
Trigger: GAGCCGGGTAACCATCAGCCATGCCATTGGCAGGAA...TCTCGTGGTTCTGGAACACGGGCTGTACGCAGGCGATCCTGTCTCCAAAGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565503.5
ENST00000567283.5
CDS-3UTR CCA 90 bp CGGCTTCAGCAGCACTTTGGAGACAGGATCGCCTGCGTACAGCCCGTGTTCCAGGAGATCTGTGAGGCTTaGCTTTGGGTTCTCACAACC +
Preference number: 4 (lower is better)
Translates to: RLQQHFGDRIACVQPVFQEICEA*LWVLTT
Trigger: GGTTGTGAGAACCCAAAGCCAAGCCTCACAGATCTC...CTGGAACACGGGCTGTACGCAGGCGATCCTGTCTCCAAAGTGCTGCTGAAGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565503.5
ENST00000567283.5
CDS-3UTR GCA 90 bp ACAGGATCGCCTGCGTACAGCCCGTGTTCCAGAACCACGAGATCTGTGAGGCTTATGCGAACGTCCCAGTaGTTGTTGACCACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: TGSPAYSPCSRTTRSVRLMRTSQ*LLTTRK
Trigger: CTTCCTGGTGGTCAACAAGCACTGGGACGTTCGCAT...AAGCCTCACAGATCTCGTGGTTCTGGAACACGGGCTGTACGCAGGCGATCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565503.5
ENST00000567283.5
CDS-3UTR GCA 90 bp GTGAGGATGACAGTATTTAGGACAGAAGATTGTGTTCAGGTCACCACTGGTGAGGGAAGGGGTCAGGCGTaGAGACCTCCACACACTCGG +
Preference number: 4 (lower is better)
Translates to: VRMTVFRTEDCVQVTTGEGRGQA*RPPHTR
Trigger: CCGAGTGTGTGGAGGTCTGCACGCCTGACCCCTTCC...CTCACCAGTGGTGACCTGAACACAATCTTCTGTCCTAAATACTGTCATCCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562070.1
CDS-3UTR GCA 90 bp ACTTTGGAGACAGGATCGCCTGCGTACAGCCCGTGTTCCAGAACCACGAGATCTAGCAGGTCTTACCAATaGCAGGTAAGCCTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: TLETGSPAYSPCSRTTRSSRSYQ*QVSLGH
Trigger: GTGACCAAGGCTTACCTGGCATTGGTAAGACCTGCT...AGATCTCGTGGTTCTGGAACACGGGCTGTACGCAGGCGATCCTGTCTCCAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567283.5
CDS CCA 90 bp CGCCGGCTCCAGCCGCGCGCCCGCGCGCTGGCGACCCAGAGACCCTaGAAGCTCCGCTCCGGACGCCTGGCAGCGCTTCCGCCCTGCACC +
Preference number: 5 (lower is better)
Translates to: RRLQPRARALATQRP*KLRSGRLAALPPCT
Trigger: GGTGCAGGGCGGAAGCGCTGCCAGGCGTCCGGAGCGGAGCTTCCAGGGTCTCTGGGTCGCCAGCGCGCGGGCGCGCGGCTGGAGCCGGCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567114.5
CDS GCA 90 bp CGGCCTGCCGAGCCACGCGTGGGTGCGTGTGCTGTGAGCACGTGGTaGGCCCCCAGCCCAGCATACAGAGGTACCCGCACCGCCCCACCC +
Preference number: 5 (lower is better)
Translates to: RPAEPRVGACAVSTW*APSPAYRGTRTAPP
Trigger: GGGTGGGGCGGTGCGGGTACCTCTGTATGCTGGGCTGGGGGCGCACCACGTGCTCACAGCACACGCACCCACGCGTGGCTCGGCAGGCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561734.5
CDS CCA 90 bp GGCCGGCCTGCCGAGCCACGCGTGGGTGCGTGTGCTGTGAGCACGTaGTGCGCCCCCAGCCCAGCATACAGAGGTACCCGCACCGCCCCA +
Preference number: 5 (lower is better)
Translates to: GRPAEPRVGACAVST*CAPSPAYRGTRTAP
Trigger: TGGGGCGGTGCGGGTACCTCTGTATGCTGGGCTGGGGGCGCACCACGTGCTCACAGCACACGCACCCACGCGTGGCTCGGCAGGCCGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561734.5
CDS GCA 90 bp CCACGCTGCCTGGCTCCATGGCCGGCCTGCCGAGCCACGCGTGGGTaGGTGTGCTGTGAGCACGTGGTGCGCCCCCAGCCCAGCATACAG +
Preference number: 5 (lower is better)
Translates to: PRCLAPWPACRATRG*VCCEHVVRPQPSIQ
Trigger: CTGTATGCTGGGCTGGGGGCGCACCACGTGCTCACAGCACACGCACCCACGCGTGGCTCGGCAGGCCGGCCATGGAGCCAGGCAGCGTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561734.5
CDS TCA 90 bp GGCTCCATGGCCGGCCTGCCGAGCCACGCGTGGGTGCGTGTGCTGTaGGCACGTGGTGCGCCCCCAGCCCAGCATACAGAGGTACCCGCA +
Preference number: 5 (lower is better)
Translates to: GSMAGLPSHAWVRVL*ARGAPPAQHTEVPA
Trigger: TGCGGGTACCTCTGTATGCTGGGCTGGGGGCGCACCACGTGCTCACAGCACACGCACCCACGCGTGGCTCGGCAGGCCGGCCATGGAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561734.5
CDS GCA 90 bp AGCCCAGCATACAGAGGTACCCGCACCGCCCCACCCGGGCTCCGGTaGGAAGCCACCGAGCCGGGTCCGCAGCCCTACTGTGCACCTGCA +
Preference number: 5 (lower is better)
Translates to: SPAYRGTRTAPPGLR*EATEPGPQPYCAPA
Trigger: TGCAGGTGCACAGTAGGGCTGCGGACCCGGCTCGGTGGCTTCGCACCGGAGCCCGGGTGGGGCGGTGCGGGTACCTCTGTATGCTGGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561734.5
CDS-3UTR CAA 90 bp GGTCCTCCCGGCCCGAGACTTCTCCGTAGGTCAGGTCGCCCACCACGGGGTGGCCTGCCGGCGGCTGCCTaGTTTAGGGCCACGCACAGC +
Preference number: 5 (lower is better)
Translates to: GPPGPRLLRRSGRPPRGGLPAAA*FRATHS
Trigger: GCTGTGCGTGGCCCTAAACAAGGCAGCCGCCGGCAG...GCCACCCCGTGGTGGGCGACCTGACCTACGGAGAAGTCTCGGGCCGGGAGGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562070.1
ENST00000565809.5
ENST00000567283.5
CDS-3UTR CAA 90 bp GGCCGCGGTGCGGTCGTCACCTGTGATCACGGCTGCCTGGCGCCCCCTGCCGGCGGCTTCAGCAGCACTTaGGAGACAGGATCGCCTGCG +
Preference number: 5 (lower is better)
Translates to: GRGAVVTCDHGCLAPPAGGFSST*ETGSPA
Trigger: CGCAGGCGATCCTGTCTCCAAAGTGCTGCTGAAGCC...GCCGGCAGGGGGCGCCAGGCAGCCGTGATCACAGGTGACGACCGCACCGCGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CAA 90 bp TCCCACGGCCGCGGTGCGGTCGTCACCTGTGATCACGGCTGCCTGGCGCCCCCTAGCCAGGAGCCCAGGTaGTGGCATGGGGGACAGAGG +
Preference number: 5 (lower is better)
Translates to: SHGRGAVVTCDHGCLAPPSQEPR*WHGGQR
Trigger: CCTCTGTCCCCCATGCCACAACCTGGGCTCCTGGCT...AGGGGGCGCCAGGCAGCCGTGATCACAGGTGACGACCGCACCGCGGCCGTGGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS GCA 90 bp CCGGTGCGAAGCCACCGAGCCGGGTCCGCAGCCCTACTGTGCACCTaGATCCTCAGTCCCCGAGATCAGTCCCCAGGGCGTCAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: PVRSHRAGSAALLCT*ILSPRDQSPGRQLG
Trigger: CCCCAGCTGACGCCCTGGGGACTGATCTCGGGGACTGAGGATGCAGGTGCACAGTAGGGCTGCGGACCCGGCTCGGTGGCTTCGCACCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561734.5
CDS GCA 90 bp CGGGCTCCGGTGCGAAGCCACCGAGCCGGGTCCGCAGCCCTACTGTaGACCTGCATCCTCAGTCCCCGAGATCAGTCCCCAGGGCGTCAG +
Preference number: 5 (lower is better)
Translates to: RAPVRSHRAGSAALL*TCILSPRDQSPGRQ
Trigger: CTGACGCCCTGGGGACTGATCTCGGGGACTGAGGATGCAGGTGCACAGTAGGGCTGCGGACCCGGCTCGGTGGCTTCGCACCGGAGCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561734.5
CDS GCA 90 bp TGCCTGGCTCCATGGCCGGCCTGCCGAGCCACGCGTGGGTGCGTGTaGTGTGAGCACGTGGTGCGCCCCCAGCCCAGCATACAGAGGTAC +
Preference number: 5 (lower is better)
Translates to: CLAPWPACRATRGCV*CEHVVRPQPSIQRY
Trigger: GTACCTCTGTATGCTGGGCTGGGGGCGCACCACGTGCTCACAGCACACGCACCCACGCGTGGCTCGGCAGGCCGGCCATGGAGCCAGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561734.5
CDS GCA 90 bp CCAGGAAGTCGCGGCTCCGGTACACGATGGACAGGTTCTCCACGCTaGCTGGCTCCATGGCCGGCCTGCCGAGCCACGCGTGGGTGCGTG +
Preference number: 5 (lower is better)
Translates to: PGSRGSGTRWTGSPR*LAPWPACRATRGCV
Trigger: CACGCACCCACGCGTGGCTCGGCAGGCCGGCCATGGAGCCAGGCAGCGTGGAGAACCTGTCCATCGTGTACCGGAGCCGCGACTTCCTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561734.5
CDS CCA 90 bp CGCTGCCGGCGGCTGCCTTGTTTAGGGCCACGCACAGCGCCCCGCTaGTGGAGAAATCCAGCTGGTGGCAGAACCTGCTGCCGGGCCGTG +
Preference number: 5 (lower is better)
Translates to: RCRRLPCLGPRTAPR*WRNPAGGRTCCRAV
Trigger: CACGGCCCGGCAGCAGGTTCTGCCACCAGCTGGATTTCTCCACCAGCGGGGCGCTGTGCGTGGCCCTAAACAAGGCAGCCGCCGGCAGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567114.5
CDS-3UTR CAA 90 bp GCCCGAGACTTCTCCGTAGGTCAGGTCGCCCACCACGGGGTGGCCCAGGGCACTCTGCCGGCGGCTGCCTaGTTTAGGGCCACGCACAGC +
Preference number: 5 (lower is better)
Translates to: ARDFSVGQVAHHGVAQGTLPAAA*FRATHS
Trigger: GCTGTGCGTGGCCCTAAACAAGGCAGCCGCCGGCAG...AGTGCCCTGGGCCACCCCGTGGTGGGCGACCTGACCTACGGAGAAGTCTCGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562070.1
ENST00000565809.5
ENST00000567283.5
CDS-3UTR CAA 90 bp GGGCATGTGGGCAGGAAGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTGTCACGCGCCGCTCCTaGAAGCACCTGTACGCGCTG +
Preference number: 5 (lower is better)
Translates to: GHVGRKALGIPHQSHGRGVTRRS*KHLYAL
Trigger: CAGCGCGTACAGGTGCTTCAAGGAGCGGCGCGTGAC...ACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCTTCCTGCCCACATGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CAA 90 bp ATGTGGGCAGGAAGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTGCGGGTCACGCGCCGCTCCTaGAAGCACCTGTACGCGCTG +
Preference number: 5 (lower is better)
Translates to: MWAGRPSGSRISPTAAVRVTRRS*KHLYAL
Trigger: CAGCGCGTACAGGTGCTTCAAGGAGCGGCGCGTGAC...CCGCACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCTTCCTGCCCACAT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CAA 90 bp GAAGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTGCGGTCGTCACCTGAGCCAGGAGCCCAGGTaGTGGCATGGGGGACAGAGG +
Preference number: 5 (lower is better)
Translates to: EGPRDPASVPRPRCGRHLSQEPR*WHGGQR
Trigger: CCTCTGTCCCCCATGCCACAACCTGGGCTCCTGGCT...CAGGTGACGACCGCACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCTTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS GCA 90 bp ACACGATGGACAGGTTCTCCACGCTGCCTGGCTCCATGGCCGGCCTaGCGAGCCACGCGTGGGTGCGTGTGCTGTGAGCACGTGGTGCGC +
Preference number: 5 (lower is better)
Translates to: TRWTGSPRCLAPWPA*RATRGCVCCEHVVR
Trigger: GCGCACCACGTGCTCACAGCACACGCACCCACGCGTGGCTCGGCAGGCCGGCCATGGAGCCAGGCAGCGTGGAGAACCTGTCCATCGTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561734.5
CDS GCA 90 bp GTGTCAGGGTCGGCCAGCTCGGGAAAGCGGTACCGCAGCTGCTTCTaGAGGGTCAGAGTCTCCCGCCACGCCTTGCTGCTGCCGGGCCGT +
Preference number: 5 (lower is better)
Translates to: VSGSASSGKRYRSCF*RVRVSRHALLLPGR
Trigger: ACGGCCCGGCAGCAGCAAGGCGTGGCGGGAGACTCTGACCCTGCAGAAGCAGCTGCGGTACCGCTTTCCCGAGCTGGCCGACCCTGACAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565377.1
ENST00000569601.5
CDS CCA 90 bp GGCTCCGGTACACGATGGACAGGTTCTCCACGCTGCCTGGCTCCATaGCCGGCCTGCCGAGCCACGCGTGGGTGCGTGTGCTGTGAGCAC +
Preference number: 5 (lower is better)
Translates to: GSGTRWTGSPRCLAP*PACRATRGCVCCEH
Trigger: GTGCTCACAGCACACGCACCCACGCGTGGCTCGGCAGGCCGGCCATGGAGCCAGGCAGCGTGGAGAACCTGTCCATCGTGTACCGGAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561734.5
CDS CCA 90 bp GAAGTCGCGGCTCCGGTACACGATGGACAGGTTCTCCACGCTGCCTaGCTCCATGGCCGGCCTGCCGAGCCACGCGTGGGTGCGTGTGCT +
Preference number: 5 (lower is better)
Translates to: EVAAPVHDGQVLHAA*LHGRPAEPRVGACA
Trigger: AGCACACGCACCCACGCGTGGCTCGGCAGGCCGGCCATGGAGCCAGGCAGCGTGGAGAACCTGTCCATCGTGTACCGGAGCCGCGACTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561734.5
CDS CCA 90 bp TGCCGGCGGCTGCCTTGTTTAGGGCCACGCACAGCGCCCCGCTGGTaGAGAAATCCAGCTGGTGGCAGAACCTGCTGCCGGGCCGTGCAG +
Preference number: 5 (lower is better)
Translates to: CRRLPCLGPRTAPRW*RNPAGGRTCCRAVQ
Trigger: CTGCACGGCCCGGCAGCAGGTTCTGCCACCAGCTGGATTTCTCCACCAGCGGGGCGCTGTGCGTGGCCCTAAACAAGGCAGCCGCCGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567114.5
CDS-3UTR CAA 90 bp GAGCCGGAAGCTGTTCCAGGAGGAGGGAGGGGCCTCGGTTTCTCCCGGGGCATGCTGCCGGCGGCTGCCTaGTTTAGGGCCACGCACAGC +
Preference number: 5 (lower is better)
Translates to: EPEAVPGGGRGLGFSRGMLPAAA*FRATHS
Trigger: GCTGTGCGTGGCCCTAAACAAGGCAGCCGCCGGCAG...CATGCCCCGGGAGAAACCGAGGCCCCTCCCTCCTCCTGGAACAGCTTCCGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CAA 90 bp TCCCACGGCCGCGGTGCGGTCGTCACCTGTGATCACGGCTGCCTGGCGCCCCCTCCTCTAGAGGGTAGGTaGGGGGCAGTAGCTCACCAG +
Preference number: 5 (lower is better)
Translates to: SHGRGAVVTCDHGCLAPPPLEGR*GAVAHQ
Trigger: CTGGTGAGCTACTGCCCCCAACCTACCCTCTAGAGG...AGGGGGCGCCAGGCAGCCGTGATCACAGGTGACGACCGCACCGCGGCCGTGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CAA 90 bp CACACGCAGCCGGGCCTGCAGACTCGAGCCCAGCAGGGACCATTAGGTCTCGGGGTCACGCGCCGCTCCTaGAAGCACCTGTACGCGCTG +
Preference number: 5 (lower is better)
Translates to: HTQPGLQTRAQQGPLGLGVTRRS*KHLYAL
Trigger: CAGCGCGTACAGGTGCTTCAAGGAGCGGCGCGTGAC...CCCGAGACCTAATGGTCCCTGCTGGGCTCGAGTCTGCAGGCCCGGCTGCGTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CAA 90 bp GCACACGCAGCCGGGCCTGCAGACTCGAGCCCAGCAGGGACCATTAGGTCTCGGGTCACGCGCCGCTCCTaGAAGCACCTGTACGCGCTG +
Preference number: 5 (lower is better)
Translates to: AHAAGPADSSPAGTIRSRVTRRS*KHLYAL
Trigger: CAGCGCGTACAGGTGCTTCAAGGAGCGGCGCGTGAC...CCGAGACCTAATGGTCCCTGCTGGGCTCGAGTCTGCAGGCCCGGCTGCGTGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CAA 90 bp CCTCCCGGCCCGAGACTTCTCCGTAGGTCAGGTCGCCCACCACGGGGTGGCCCAGGCTTCAGCAGCACTTaGGAGACAGGATCGCCTGCG +
Preference number: 5 (lower is better)
Translates to: PPGPRLLRRSGRPPRGGPGFSST*ETGSPA
Trigger: CGCAGGCGATCCTGTCTCCAAAGTGCTGCTGAAGCC...TGGGCCACCCCGTGGTGGGCGACCTGACCTACGGAGAAGTCTCGGGCCGGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562070.1
ENST00000565809.5
ENST00000567283.5
CDS-3UTR CAA 90 bp GGGCATGTGGGCAGGAAGGCCCTCGGGATCCCGCATCAGTCCCACGGCCGCGGTCCTCTAGAGGGTAGGTaGGGGGCAGTAGCTCACCAG +
Preference number: 5 (lower is better)
Translates to: GHVGRKALGIPHQSHGRGPLEGR*GAVAHQ
Trigger: CTGGTGAGCTACTGCCCCCAACCTACCCTCTAGAGG...ACCGCGGCCGTGGGACTGATGCGGGATCCCGAGGGCCTTCCTGCCCACATGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS TCA 90 bp TGGTGTGGGCCCGGCCCTCCGTGCTGTTCCTGCCAATGGCATGGCTaGTGGTTACCCGGCTCTCCTGGATGTGCCCCCGCAGCTGTACGC +
Preference number: 5 (lower is better)
Translates to: WCGPGPPCCSCQWHG*WLPGSPGCAPAAVR
Trigger: GCGTACAGCTGCGGGGGCACATCCAGGAGAGCCGGGTAACCATCAGCCATGCCATTGGCAGGAACAGCACGGAGGGCCGGGCCCACACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565503.5
CDS-3UTR CAA 90 bp TCCGGTTCCAGCGTCCACTCCGACAGCCACTGCAGGCAGGGGCCCCGCTGTGCCCGAACGTCCCAGTGCTaGTTGACCACCAGGAAGTCG +
Preference number: 5 (lower is better)
Translates to: SGSSVHSDSHCRQGPRCARTSQC*LTTRKS
Trigger: CGACTTCCTGGTGGTCAACAAGCACTGGGACGTTCG...GGCACAGCGGGGCCCCTGCCTGCAGTGGCTGTCGGAGTGGACGCTGGAACCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565809.5
CDS-3UTR CAA 90 bp GTGACGTGGCAGAGCTGCCAGCAGGGGCCCAAGAGACTGCAGCAGGTTGGTGCTCTGCCGGCGGCTGCCTaGTTTAGGGCCACGCACAGC +
Preference number: 5 (lower is better)
Translates to: VTWQSCQQGPKRLQQVGALPAAA*FRATHS
Trigger: GCTGTGCGTGGCCCTAAACAAGGCAGCCGCCGGCAG...AGCACCAACCTGCTGCAGTCTCTTGGGCCCCTGCTGGCAGCTCTGCCACGTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS TCA 90 bp TGGTGTGGGCCCGGCCCTCCGTGCTGTTCCTGCCAATGGCATGGCTaGTGGTTACCCGGCTCTCCTGGATGTGCCCCCGCAGCAATGCCA +
Preference number: 5 (lower is better)
Translates to: WCGPGPPCCSCQWHG*WLPGSPGCAPAAMP
Trigger: TGGCATTGCTGCGGGGGCACATCCAGGAGAGCCGGGTAACCATCAGCCATGCCATTGGCAGGAACAGCACGGAGGGCCGGGCCCACACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000562070.1
ENST00000563560.1
ENST00000565377.1
ENST00000567114.5
ENST00000569601.5
CDS CCA 90 bp CACATGGTGTGGGCCCGGCCCTCCGTGCTGTTCCTGCCAATGGCATaGCTGATGGTTACCCGGCTCTCCTGGATGTGCCCCCGCAGCTGT +
Preference number: 5 (lower is better)
Translates to: HMVWARPSVLFLPMA*LMVTRLSWMCPRSC
Trigger: ACAGCTGCGGGGGCACATCCAGGAGAGCCGGGTAACCATCAGCCATGCCATTGGCAGGAACAGCACGGAGGGCCGGGCCCACACCATGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565503.5
CDS-3UTR CAA 90 bp TCCGGGCAGAGAGGGAACCACTGGTACAGTGAGGCCAAGGCACACGCAGCCGGGGTCTCCCGCCACGCCTaGCTGTCAATGCGAACGTCC +
Preference number: 5 (lower is better)
Translates to: SGQRGNHWYSEAKAHAAGVSRHA*LSMRTS
Trigger: GGACGTTCGCATTGACAGCAAGGCGTGGCGGGAGAC...CCCGGCTGCGTGTGCCTTGGCCTCACTGTACCAGTGGTTCCCTCTCTGCCCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
CDS-3UTR CAA 90 bp AAGCTGGGGTCCCGGAGGCAGAGTGACAATGCATGGCTGTGTGGGAGCCAGGCACTGCCGGCGGCTGCCTaGTTTAGGGCCACGCACAGC +
Preference number: 5 (lower is better)
Translates to: KLGSRRQSDNAWLCGSQALPAAA*FRATHS
Trigger: GCTGTGCGTGGCCCTAAACAAGGCAGCCGCCGGCAG...TGCCTGGCTCCCACACAGCCATGCATTGTCACTCTGCCTCCGGGACCCCAGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CAA 90 bp ACCCTGCGAGCCCTCGATGCACATGGTGTGGGCCCGGCCCTCCGTGCTGTTCCTGGCTTCAGCAGCACTTaGGAGACAGGATCGCCTGCG +
Preference number: 5 (lower is better)
Translates to: TLRALDAHGVGPALRAVPGFSST*ETGSPA
Trigger: CGCAGGCGATCCTGTCTCCAAAGTGCTGCTGAAGCC...AGGAACAGCACGGAGGGCCGGGCCCACACCATGTGCATCGAGGGCTCGCAGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565503.5
CDS-3UTR CAA 90 bp GGACGCAGGGACCAGATGGGTCTCCCAGGCCAGGTGAGCCCAGAACGGCCCTTCGGCTTCAGCAGCACTTaGGAGACAGGATCGCCTGCG +
Preference number: 5 (lower is better)
Translates to: GRRDQMGLPGQVSPERPFGFSST*ETGSPA
Trigger: CGCAGGCGATCCTGTCTCCAAAGTGCTGCTGAAGCC...GAAGGGCCGTTCTGGGCTCACCTGGCCTGGGAGACCCATCTGGTCCCTGCGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CAA 90 bp GCAGCCGGGCCTGCAGACTCGAGCCCAGCAGGGACCATTAGGTCTCGGGAGGAGCCTCTAGAGGGTAGGTaGGGGGCAGTAGCTCACCAG +
Preference number: 5 (lower is better)
Translates to: AAGPADSSPAGTIRSREEPLEGR*GAVAHQ
Trigger: CTGGTGAGCTACTGCCCCCAACCTACCCTCTAGAGG...CTCCTCCCGAGACCTAATGGTCCCTGCTGGGCTCGAGTCTGCAGGCCCGGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CAA 90 bp TGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCCAAGCTAGCCAGGAGCCCAGGTaGTGGCATGGGGGACAGAGG +
Preference number: 5 (lower is better)
Translates to: CGMGDRGGGTWQTHSSQASQEPR*WHGGQR
Trigger: CCTCTGTCCCCCATGCCACAACCTGGGCTCCTGGCT...AGCTTGGGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CAA 90 bp ATCCAGGGAGGGCAGGAAGGGGTCAGGCGTGCAGACCTCCACACACTCGGTGTCAGCCAGGAGCCCAGGTaGTGGCATGGGGGACAGAGG +
Preference number: 5 (lower is better)
Translates to: IQGGQEGVRRADLHTLGVSQEPR*WHGGQR
Trigger: CCTCTGTCCCCCATGCCACAACCTGGGCTCCTGGCT...GACACCGAGTGTGTGGAGGTCTGCACGCCTGACCCCTTCCTGCCCTCCCTGGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565809.5
CDS GCA 90 bp GTGTCAGGGTCGGCCAGCTCGGGAAAGCGGTACCGCAGCTGCTTCTaGAGGGTCAGAGTCTCCCGCCACGCCTTGCTGTCAATGCGAACG +
Preference number: 5 (lower is better)
Translates to: VSGSASSGKRYRSCF*RVRVSRHALLSMRT
Trigger: CGTTCGCATTGACAGCAAGGCGTGGCGGGAGACTCTGACCCTGCAGAAGCAGCTGCGGTACCGCTTTCCCGAGCTGGCCGACCCTGACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000563560.1
ENST00000565503.5
ENST00000565809.5
ENST00000567283.5
CDS CCA 90 bp CACATGGTGTGGGCCCGGCCCTCCGTGCTGTTCCTGCCAATGGCATaGCTGATGGTTACCCGGCTCTCCTGGATGTGCCCCCGCAGCAAT +
Preference number: 5 (lower is better)
Translates to: HMVWARPSVLFLPMA*LMVTRLSWMCPRSN
Trigger: ATTGCTGCGGGGGCACATCCAGGAGAGCCGGGTAACCATCAGCCATGCCATTGGCAGGAACAGCACGGAGGGCCGGGCCCACACCATGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000562070.1
ENST00000563560.1
ENST00000565377.1
ENST00000567114.5
ENST00000569601.5
CDS-3UTR CAA 90 bp GGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCCAAGTCTCCCGCCACGCCTaGCTGTCAATGCGAACGTCC +
Preference number: 5 (lower is better)
Translates to: GCGMGDRGGGTWQTHSSQVSRHA*LSMRTS
Trigger: GGACGTTCGCATTGACAGCAAGGCGTGGCGGGAGAC...TTGGGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
CDS-3UTR CAA 90 bp CATCCAGGGAGGGCAGGAAGGGGTCAGGCGTGCAGACCTCCACACACTCGGTGTGTCTCCCGCCACGCCTaGCTGTCAATGCGAACGTCC +
Preference number: 5 (lower is better)
Translates to: HPGRAGRGQACRPPHTRCVSRHA*LSMRTS
Trigger: GGACGTTCGCATTGACAGCAAGGCGTGGCGGGAGAC...ACACCGAGTGTGTGGAGGTCTGCACGCCTGACCCCTTCCTGCCCTCCCTGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565809.5
ENST00000567283.5
CDS-3UTR CAA 90 bp CCAGGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCGGCTTCAGCAGCACTTaGGAGACAGGATCGCCTGCG +
Preference number: 5 (lower is better)
Translates to: PGCGMGDRGGGTWQTHSSGFSST*ETGSPA
Trigger: CGCAGGCGATCCTGTCTCCAAAGTGCTGCTGAAGCC...GGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CAA 90 bp GAAGCTGTTCCAGGAGGAGGGAGGGGCCTCGGTTTCTCCCGGGGCATGTGGGCAGGCTTCAGCAGCACTTaGGAGACAGGATCGCCTGCG +
Preference number: 5 (lower is better)
Translates to: EAVPGGGRGLGFSRGMWAGFSST*ETGSPA
Trigger: CGCAGGCGATCCTGTCTCCAAAGTGCTGCTGAAGCC...TGCCCACATGCCCCGGGAGAAACCGAGGCCCCTCCCTCCTCCTGGAACAGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CAA 90 bp CCAAGGCACACGCAGCCGGGCCTGCAGACTCGAGCCCAGCAGGGACCATTAGGTCCTCTAGAGGGTAGGTaGGGGGCAGTAGCTCACCAG +
Preference number: 5 (lower is better)
Translates to: PRHTQPGLQTRAQQGPLGPLEGR*GAVAHQ
Trigger: CTGGTGAGCTACTGCCCCCAACCTACCCTCTAGAGG...ACCTAATGGTCCCTGCTGGGCTCGAGTCTGCAGGCCCGGCTGCGTGTGCCTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS CCA 90 bp TTCTCACAACCTGCCACACCCTGCGAGCCCTCGATGCACATGGTGTaGGCCCGGCCCTCCGTGCTGTTCCTGCCAATGGCATGGCTGATG +
Preference number: 5 (lower is better)
Translates to: FSQPATPCEPSMHMV*ARPSVLFLPMAWLM
Trigger: CATCAGCCATGCCATTGGCAGGAACAGCACGGAGGGCCGGGCCCACACCATGTGCATCGAGGGCTCGCAGGGTGTGGCAGGTTGTGAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563560.1
ENST00000569601.5
CDS-3UTR CAA 90 bp GAAGCTGTTCCAGGAGGAGGGAGGGGCCTCGGTTTCTCCCGGGGCATGTGGGCACGAACGTCCCAGTGCTaGTTGACCACCAGGAAGTCG +
Preference number: 5 (lower is better)
Translates to: EAVPGGGRGLGFSRGMWARTSQC*LTTRKS
Trigger: CGACTTCCTGGTGGTCAACAAGCACTGGGACGTTCG...TGCCCACATGCCCCGGGAGAAACCGAGGCCCCTCCCTCCTCCTGGAACAGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
CDS-3UTR CAA 90 bp AGGGGCAGAGGACGCAGGGACCAGATGGGTCTCCCAGGCCAGGTGAGCCCAGAACGAACGTCCCAGTGCTaGTTGACCACCAGGAAGTCG +
Preference number: 5 (lower is better)
Translates to: RGRGRRDQMGLPGQVSPERTSQC*LTTRKS
Trigger: CGACTTCCTGGTGGTCAACAAGCACTGGGACGTTCG...TTCTGGGCTCACCTGGCCTGGGAGACCCATCTGGTCCCTGCGTCCTCTGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
CDS-3UTR CAA 90 bp GGTGTCCGTGGGGATGCGCAGGTAGAAAGCGTGCAGCATCATTCTGAACGGCCGGTCACGCGCCGCTCCTaGAAGCACCTGTACGCGCTG +
Preference number: 5 (lower is better)
Translates to: GVRGDAQVESVQHHSERPVTRRS*KHLYAL
Trigger: CAGCGCGTACAGGTGCTTCAAGGAGCGGCGCGTGAC...CGGCCGTTCAGAATGATGCTGCACGCTTTCTACCTGCGCATCCCCACGGACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562070.1
ENST00000565809.5
ENST00000567283.5
CDS-3UTR CAA 90 bp GGATCGCCTGCGTACAGCCCGTGTTCCAGAACCACGAGATCTGTGAGGCTTGGCGTCACGCGCCGCTCCTaGAAGCACCTGTACGCGCTG +
Preference number: 5 (lower is better)
Translates to: GSPAYSPCSRTTRSVRLGVTRRS*KHLYAL
Trigger: CAGCGCGTACAGGTGCTTCAAGGAGCGGCGCGTGAC...GCCAAGCCTCACAGATCTCGTGGTTCTGGAACACGGGCTGTACGCAGGCGATCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567283.5
CDS TCA 90 bp TCCCTTCTGTCACCACCAGGACACCGCCCACCCCAGACACACCCGTaGGCGGCTTCAGCAGCACTTTGGAGACAGGATCGCCTGCGTACA +
Preference number: 5 (lower is better)
Translates to: SLLSPPGHRPPQTHP*AASAALWRQDRLRT
Trigger: TGTACGCAGGCGATCCTGTCTCCAAAGTGCTGCTGAAGCCGCTCACGGGTGTGTCTGGGGTGGGCGGTGTCCTGGTGGTGACAGAAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562070.1
CDS-3UTR CAA 90 bp GGTGTCCGTGGGGATGCGCAGGTAGAAAGCGTGCAGCATCATTCTGAACGGCCGGTCTCCCGCCACGCCTaGCTGTCAATGCGAACGTCC +
Preference number: 5 (lower is better)
Translates to: GVRGDAQVESVQHHSERPVSRHA*LSMRTS
Trigger: GGACGTTCGCATTGACAGCAAGGCGTGGCGGGAGAC...CGGCCGTTCAGAATGATGCTGCACGCTTTCTACCTGCGCATCCCCACGGACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565809.5
ENST00000567283.5
CDS GCA 90 bp GTCAGAGTCTCCCGCCACGCCTTGCTGTCAATGCGAACGTCCCAGTaGTTGTTGACCACCAGGAAGTCGCGGCTCCGGTACACGATGGAC +
Preference number: 5 (lower is better)
Translates to: VRVSRHALLSMRTSQ*LLTTRKSRLRYTMD
Trigger: GTCCATCGTGTACCGGAGCCGCGACTTCCTGGTGGTCAACAAGCACTGGGACGTTCGCATTGACAGCAAGGCGTGGCGGGAGACTCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000563560.1
ENST00000565503.5
ENST00000565809.5
ENST00000567283.5
CDS-3UTR CAA 90 bp AGCGTGCAGCATCATTCTGAACGGCCGGTCCTCCCGGCCCGAGACTTCTCCGTACGAACGTCCCAGTGCTaGTTGACCACCAGGAAGTCG +
Preference number: 5 (lower is better)
Translates to: SVQHHSERPVLPARDFSVRTSQC*LTTRKS
Trigger: CGACTTCCTGGTGGTCAACAAGCACTGGGACGTTCG...TACGGAGAAGTCTCGGGCCGGGAGGACCGGCCGTTCAGAATGATGCTGCACGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565809.5
ENST00000567283.5
CDS-3UTR CAA 90 bp CAGCAGCACTTTGGAGACAGGATCGCCTGCGTACAGCCCGTGTTCCAGAACCACGTCTCCCGCCACGCCTaGCTGTCAATGCGAACGTCC +
Preference number: 5 (lower is better)
Translates to: QQHFGDRIACVQPVFQNHVSRHA*LSMRTS
Trigger: GGACGTTCGCATTGACAGCAAGGCGTGGCGGGAGAC...GTGGTTCTGGAACACGGGCTGTACGCAGGCGATCCTGTCTCCAAAGTGCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565503.5
ENST00000567283.5
CDS-3UTR CAA 90 bp CAGCCCGTGTTCCAGAACCACGAGATCTGTGAGGCTTGGCTTTGGGTTCTCACACTGCCGGCGGCTGCCTaGTTTAGGGCCACGCACAGC +
Preference number: 5 (lower is better)
Translates to: QPVFQNHEICEAWLWVLTLPAAA*FRATHS
Trigger: GCTGTGCGTGGCCCTAAACAAGGCAGCCGCCGGCAG...TGTGAGAACCCAAAGCCAAGCCTCACAGATCTCGTGGTTCTGGAACACGGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565503.5
CDS-3UTR CAA 90 bp GTAGAAAGCGTGCAGCATCATTCTGAACGGCCGGTCCTCCCGGCCCGAGACTTCGGCTTCAGCAGCACTTaGGAGACAGGATCGCCTGCG +
Preference number: 5 (lower is better)
Translates to: VESVQHHSERPVLPARDFGFSST*ETGSPA
Trigger: CGCAGGCGATCCTGTCTCCAAAGTGCTGCTGAAGCC...GAAGTCTCGGGCCGGGAGGACCGGCCGTTCAGAATGATGCTGCACGCTTTCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562070.1
ENST00000565809.5
ENST00000567283.5
CDS-3UTR CAA 90 bp GGCAGAGCTGCCAGCAGGGGCCCAAGAGACTGCAGCAGGTTGGTGCTCACAGTGAGAGACTGCAGCAGGTaGGTGCTCACAGTGGATCTG +
Preference number: 5 (lower is better)
Translates to: GRAASRGPRDCSRLVLTVRDCSR*VLTVDL
Trigger: CAGATCCACTGTGAGCACCAACCTGCTGCAGTCTCT...CACTGTGAGCACCAACCTGCTGCAGTCTCTTGGGCCCCTGCTGGCAGCTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CAA 90 bp GTGACGTGGCAGAGCTGCCAGCAGGGGCCCAAGAGACTGCAGCAGGTTGGTGCTAGAGACTGCAGCAGGTaGGTGCTCACAGTGGATCTG +
Preference number: 5 (lower is better)
Translates to: VTWQSCQQGPKRLQQVGARDCSR*VLTVDL
Trigger: CAGATCCACTGTGAGCACCAACCTGCTGCAGTCTCT...AGCACCAACCTGCTGCAGTCTCTTGGGCCCCTGCTGGCAGCTCTGCCACGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CAA 90 bp TGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCCAAGCTAGAGACTGCAGCAGGTaGGTGCTCACAGTGGATCTG +
Preference number: 5 (lower is better)
Translates to: CGMGDRGGGTWQTHSSQARDCSR*VLTVDL
Trigger: CAGATCCACTGTGAGCACCAACCTGCTGCAGTCTCT...AGCTTGGGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000565809.5
ENST00000567114.5
CDS-3UTR CAA 90 bp TGCAGTCTTGAAGCAGCCTCTTGGGGTGGAACTCTCCCTGTCCCCTGCCATGAGGACCCCGCTGCAGTCTaGAAGCAGCCTCTTGGGGTG +
Preference number: 5 (lower is better)
Translates to: CSLEAASWGGTLPVPCHEDPAAV*KQPLGV
Trigger: CACCCCAAGAGGCTGCTTCAAGACTGCAGCGGGGTC...CTCATGGCAGGGGACAGGGAGAGTTCCACCCCAAGAGGCTGCTTCAAGACTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000562070.1
CDS TCA 90 bp TCTCCCGCCACGCCTTGCTGTCAATGCGAACGTCCCAGTGCTTGTTaGCCACCAGGAAGTCGCGGCTCCGGTACACGATGGACAGGTTCT +
Preference number: 5 (lower is better)
Translates to: SPATPCCQCERPSAC*PPGSRGSGTRWTGS
Trigger: AGAACCTGTCCATCGTGTACCGGAGCCGCGACTTCCTGGTGGTCAACAAGCACTGGGACGTTCGCATTGACAGCAAGGCGTGGCGGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000563560.1
ENST00000565503.5
ENST00000565809.5
ENST00000567283.5
CDS TCA 90 bp CAGGATCGCCTGCGTACAGCCCGTGTTCCAGAACCACGAGATCTGTaGGGCTTGGCTTTGGGTTCTCACAACCTGCCACACCCTGCGAGC +
Preference number: 5 (lower is better)
Translates to: QDRLRTARVPEPRDL*GLALGSHNLPHPAS
Trigger: GCTCGCAGGGTGTGGCAGGTTGTGAGAACCCAAAGCCAAGCCTCACAGATCTCGTGGTTCTGGAACACGGGCTGTACGCAGGCGATCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563560.1
ENST00000569601.5
CDS TCA 90 bp ACCCCCAAGGAATCAGTCAGGAGCCAGCAGGGACCCTGTGTCAGGTaGGAAGCTGAGAGGCTGCAGGGCGTGGAGTTAAGAACGCAGGAG +
Preference number: 5 (lower is better)
Translates to: TPKESVRSQQGPCVR*EAERLQGVELRTQE
Trigger: CTCCTGCGTTCTTAACTCCACGCCCTGCAGCCTCTCAGCTTCTCACCTGACACAGGGTCCCTGCTGGCTCCTGACTGATTCCTTGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562070.1
CDS GCA 90 bp CACACCCGTGAGCGGCTTCAGCAGCACTTTGGAGACAGGATCGCCTaGGTACAGCCCGTGTTCCAGAACCACGAGATCTGTGAGGCTTGG +
Preference number: 5 (lower is better)
Translates to: HTRERLQQHFGDRIA*VQPVFQNHEICEAW
Trigger: CCAAGCCTCACAGATCTCGTGGTTCTGGAACACGGGCTGTACGCAGGCGATCCTGTCTCCAAAGTGCTGCTGAAGCCGCTCACGGGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562070.1
CDS-3UTR CAA 90 bp GCCCAGGTTGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTTCACTGAACATTTATTaGGAGTCCCTGGAGCCCTGC +
Preference number: 5 (lower is better)
Translates to: AQVVAWGTEEVGPGRPTASLNIY*ESLEPC
Trigger: GCAGGGCTCCAGGGACTCCAAATAAATGTTCAGTGA...AGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACAACCTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000007264.7
ENST00000561734.5
CDS-3UTR CAA 90 bp TGTGGCATGGGGGACAGAGGAGGTGGGACCTGGCAGACCCACAGCTCCCAAGCTTCACTGAACATTTATTaGGAGTCCCTGGAGCCCTGC +
Preference number: 5 (lower is better)
Translates to: CGMGDRGGGTWQTHSSQASLNIY*ESLEPC
Trigger: GCAGGGCTCCAGGGACTCCAAATAAATGTTCAGTGA...AGCTTGGGAGCTGTGGGTCTGCCAGGTCCCACCTCCTCTGTCCCCCATGCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000007264.7
ENST00000561734.5
CDS TCA 90 bp GGAATCAGTCAGGAGCCAGCAGGGACCCTGTGTCAGGTGAGAAGCTaGGAGGCTGCAGGGCGTGGAGTTAAGAACGCAGGAGTGCTTGTT +
Preference number: 5 (lower is better)
Translates to: GISQEPAGTLCQVRS*EAAGRGVKNAGVLV
Trigger: AACAAGCACTCCTGCGTTCTTAACTCCACGCCCTGCAGCCTCTCAGCTTCTCACCTGACACAGGGTCCCTGCTGGCTCCTGACTGATTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562070.1
CDS-3UTR CAA 90 bp CAGCCCGTGTTCCAGAACCACGAGATCTGTGAGGCTTGGCTTTGGGTTCTCACACGAACGTCCCAGTGCTaGTTGACCACCAGGAAGTCG +
Preference number: 5 (lower is better)
Translates to: QPVFQNHEICEAWLWVLTRTSQC*LTTRKS
Trigger: CGACTTCCTGGTGGTCAACAAGCACTGGGACGTTCG...TGTGAGAACCCAAAGCCAAGCCTCACAGATCTCGTGGTTCTGGAACACGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565503.5
CDS TCA 90 bp CAGGATCGCCTGCGTACAGCCCGTGTTCCAGAACCACGAGATCTGTaGGGCTTGGCTTTGGGTTCTCACAACCAATGCCAGGTAAGCCTT +
Preference number: 5 (lower is better)
Translates to: QDRLRTARVPEPRDL*GLALGSHNQCQVSL
Trigger: AAGGCTTACCTGGCATTGGTTGTGAGAACCCAAAGCCAAGCCTCACAGATCTCGTGGTTCTGGAACACGGGCTGTACGCAGGCGATCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565809.5
CDS CCA 72 bp CAGCCGCGCGCCCGCGCGCTGGCGACCCAGAGACCCTaGAAGCTCCGCTCCGGACGCCTGGCAGCGCTTCCG +
Preference number: 6 (lower is better)
Translates to: QPRARALATQRP*KLRSGRLAALP
Trigger: CGGAAGCGCTGCCAGGCGTCCGGAGCGGAGCTTCCAGGGTCTCTGGGTCGCCAGCGCGCGGGCGCGCGGCTG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000007264.7
ENST00000565377.1
ENST00000567114.5
CDS CAA 72 bp GTGCCCCCGCAGCTGTACGCGCTGCCGGCGGCTGCCTaGTTTAGGGCCACGCACAGCGCCCCGCTGGTGGAG +
Preference number: 6 (lower is better)
Translates to: VPPQLYALPAAA*FRATHSAPLVE
Trigger: CTCCACCAGCGGGGCGCTGTGCGTGGCCCTAAACAAGGCAGCCGCCGGCAGCGCGTACAGCTGCGGGGGCAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565503.5
CDS TCA 72 bp GCCGGCCTGCCGAGCCACGCGTGGGTGCGTGTGCTGTaGGCACGTGGTGCGCCCCCAGCCCAGCATACAGAG +
Preference number: 6 (lower is better)
Translates to: AGLPSHAWVRVL*ARGAPPAQHTE
Trigger: CTCTGTATGCTGGGCTGGGGGCGCACCACGTGCTCACAGCACACGCACCCACGCGTGGCTCGGCAGGCCGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561734.5
CDS GCA 72 bp TACAGAGGTACCCGCACCGCCCCACCCGGGCTCCGGTaGGAAGCCACCGAGCCGGGTCCGCAGCCCTACTGT +
Preference number: 6 (lower is better)
Translates to: YRGTRTAPPGLR*EATEPGPQPYC
Trigger: ACAGTAGGGCTGCGGACCCGGCTCGGTGGCTTCGCACCGGAGCCCGGGTGGGGCGGTGCGGGTACCTCTGTA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561734.5
CDS GCA 72 bp CCATGGCCGGCCTGCCGAGCCACGCGTGGGTGCGTGTaGTGTGAGCACGTGGTGCGCCCCCAGCCCAGCATA +
Preference number: 6 (lower is better)
Translates to: PWPACRATRGCV*CEHVVRPQPSI
Trigger: TATGCTGGGCTGGGGGCGCACCACGTGCTCACAGCACACGCACCCACGCGTGGCTCGGCAGGCCGGCCATGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561734.5
CDS CCA 72 bp GCCGAGCCACGCGTGGGTGCGTGTGCTGTGAGCACGTaGTGCGCCCCCAGCCCAGCATACAGAGGTACCCGC +
Preference number: 6 (lower is better)
Translates to: AEPRVGACAVST*CAPSPAYRGTR
Trigger: GCGGGTACCTCTGTATGCTGGGCTGGGGGCGCACCACGTGCTCACAGCACACGCACCCACGCGTGGCTCGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561734.5
CDS CAA 90 bp CTCCTGGATGTGCCCCCGCAGCTGTACGCGCTGCCGGCGGCTGCCTaGTTTAGGGCCACGCACAGCGCCCCGCTGGTGGAGAAATCCAGC +
Preference number: 6 (lower is better)
Translates to: LLDVPPQLYALPAAA*FRATHSAPLVEKSS
Trigger: GCTGGATTTCTCCACCAGCGGGGCGCTGTGCGTGGCCCTAAACAAGGCAGCCGCCGGCAGCGCGTACAGCTGCGGGGGCACATCCAGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565503.5
CDS GCA 72 bp GAGCCACGCGTGGGTGCGTGTGCTGTGAGCACGTGGTaGGCCCCCAGCCCAGCATACAGAGGTACCCGCACC +
Preference number: 6 (lower is better)
Translates to: EPRVGACAVSTW*APSPAYRGTRT
Trigger: GGTGCGGGTACCTCTGTATGCTGGGCTGGGGGCGCACCACGTGCTCACAGCACACGCACCCACGCGTGGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561734.5
CDS GCA 72 bp ACAGGTTCTCCACGCTGCCTGGCTCCATGGCCGGCCTaGCGAGCCACGCGTGGGTGCGTGTGCTGTGAGCAC +
Preference number: 6 (lower is better)
Translates to: TGSPRCLAPWPA*RATRGCVCCEH
Trigger: GTGCTCACAGCACACGCACCCACGCGTGGCTCGGCAGGCCGGCCATGGAGCCAGGCAGCGTGGAGAACCTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561734.5
CDS CCA 72 bp ACACGATGGACAGGTTCTCCACGCTGCCTGGCTCCATaGCCGGCCTGCCGAGCCACGCGTGGGTGCGTGTGC +
Preference number: 6 (lower is better)
Translates to: TRWTGSPRCLAP*PACRATRGCVC
Trigger: GCACACGCACCCACGCGTGGCTCGGCAGGCCGGCCATGGAGCCAGGCAGCGTGGAGAACCTGTCCATCGTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561734.5
CDS CAA 90 bp ACGCGCCGCTCCTTGAAGCACCTGTACGCGCTGCCGGCGGCTGCCTaGTTTAGGGCCACGCACAGCGCCCCGCTGGTGGAGAAATCCAGC +
Preference number: 6 (lower is better)
Translates to: TRRSLKHLYALPAAA*FRATHSAPLVEKSS
Trigger: GCTGGATTTCTCCACCAGCGGGGCGCTGTGCGTGGCCCTAAACAAGGCAGCCGCCGGCAGCGCGTACAGGTGCTTCAAGGAGCGGCGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000562070.1
ENST00000563560.1
ENST00000565377.1
ENST00000565809.5
ENST00000567114.5
ENST00000567283.5
ENST00000569601.5
CDS GCA 72 bp AGCCACCGAGCCGGGTCCGCAGCCCTACTGTGCACCTaGATCCTCAGTCCCCGAGATCAGTCCCCAGGGCGT +
Preference number: 6 (lower is better)
Translates to: SHRAGSAALLCT*ILSPRDQSPGR
Trigger: ACGCCCTGGGGACTGATCTCGGGGACTGAGGATGCAGGTGCACAGTAGGGCTGCGGACCCGGCTCGGTGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561734.5
CDS CCA 72 bp CTGCCAATGGCATGGCTGATGGTTACCCGGCTCTCCTaGATGTGCCCCCGCAGCTGTACGCGCTGCCGGCGG +
Preference number: 6 (lower is better)
Translates to: LPMAWLMVTRLS*MCPRSCTRCRR
Trigger: CCGCCGGCAGCGCGTACAGCTGCGGGGGCACATCCAGGAGAGCCGGGTAACCATCAGCCATGCCATTGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565503.5
CDS CAA 72 bp TCCTTGAAGCACCTGTACGCGCTGCCGGCGGCTGCCTaGTTTAGGGCCACGCACAGCGCCCCGCTGGTGGAG +
Preference number: 6 (lower is better)
Translates to: SLKHLYALPAAA*FRATHSAPLVE
Trigger: CTCCACCAGCGGGGCGCTGTGCGTGGCCCTAAACAAGGCAGCCGCCGGCAGCGCGTACAGGTGCTTCAAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000562070.1
ENST00000563560.1
ENST00000565377.1
ENST00000565809.5
ENST00000567114.5
ENST00000567283.5
ENST00000569601.5
CDS TCA 72 bp CCCGGCCCTCCGTGCTGTTCCTGCCAATGGCATGGCTaGTGGTTACCCGGCTCTCCTGGATGTGCCCCCGCA +
Preference number: 6 (lower is better)
Translates to: PGPPCCSCQWHG*WLPGSPGCAPA
Trigger: TGCGGGGGCACATCCAGGAGAGCCGGGTAACCATCAGCCATGCCATTGGCAGGAACAGCACGGAGGGCCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000562070.1
ENST00000563560.1
ENST00000565377.1
ENST00000565503.5
ENST00000567114.5
ENST00000567283.5
ENST00000569601.5
CDS GCA 72 bp TCAGGGTCGGCCAGCTCGGGAAAGCGGTACCGCAGCTaGTTCTGCAGGGTCAGAGTCTCCCGCCACGCCTTG +
Preference number: 6 (lower is better)
Translates to: SGSASSGKRYRS*FCRVRVSRHAL
Trigger: CAAGGCGTGGCGGGAGACTCTGACCCTGCAGAAGCAGCTGCGGTACCGCTTTCCCGAGCTGGCCGACCCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000563560.1
ENST00000565377.1
ENST00000565503.5
ENST00000565809.5
ENST00000567283.5
ENST00000569601.5
CDS GCA 72 bp GTGCGAAGCCACCGAGCCGGGTCCGCAGCCCTACTGTaGACCTGCATCCTCAGTCCCCGAGATCAGTCCCCA +
Preference number: 6 (lower is better)
Translates to: VRSHRAGSAALL*TCILSPRDQSP
Trigger: TGGGGACTGATCTCGGGGACTGAGGATGCAGGTGCACAGTAGGGCTGCGGACCCGGCTCGGTGGCTTCGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561734.5
CDS GCA 72 bp TCGGCCAGCTCGGGAAAGCGGTACCGCAGCTGCTTCTaGAGGGTCAGAGTCTCCCGCCACGCCTTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: SASSGKRYRSCF*RVRVSRHALLL
Trigger: CAGCAGCAAGGCGTGGCGGGAGACTCTGACCCTGCAGAAGCAGCTGCGGTACCGCTTTCCCGAGCTGGCCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565377.1
ENST00000569601.5
CDS CCA 72 bp TGGGCCCGGCCCTCCGTGCTGTTCCTGCCAATGGCATaGCTGATGGTTACCCGGCTCTCCTGGATGTGCCCC +
Preference number: 6 (lower is better)
Translates to: WARPSVLFLPMA*LMVTRLSWMCP
Trigger: GGGGCACATCCAGGAGAGCCGGGTAACCATCAGCCATGCCATTGGCAGGAACAGCACGGAGGGCCGGGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000562070.1
ENST00000563560.1
ENST00000565377.1
ENST00000565503.5
ENST00000567114.5
ENST00000567283.5
ENST00000569601.5
CDS CCA 72 bp TCCTCAGTCCCCGAGATCAGTCCCCAGGGCGTCAGCTaGGGAGTCAAGGAGTCAGCCTGCTCCGGGCTGACC +
Preference number: 6 (lower is better)
Translates to: SSVPEISPQGVS*GVKESACSGLT
Trigger: GGTCAGCCCGGAGCAGGCTGACTCCTTGACTCCCCAGCTGACGCCCTGGGGACTGATCTCGGGGACTGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561734.5
CDS GCA 72 bp TCGGCCAGCTCGGGAAAGCGGTACCGCAGCTGCTTCTaGAGGGTCAGAGTCTCCCGCCACGCCTTGCTGTCA +
Preference number: 6 (lower is better)
Translates to: SASSGKRYRSCF*RVRVSRHALLS
Trigger: TGACAGCAAGGCGTGGCGGGAGACTCTGACCCTGCAGAAGCAGCTGCGGTACCGCTTTCCCGAGCTGGCCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000563560.1
ENST00000565503.5
ENST00000565809.5
ENST00000567283.5
CDS CCA 72 bp CTGCCTTGTTTAGGGCCACGCACAGCGCCCCGCTGGTaGAGAAATCCAGCTGGTGGCAGAACCTGCTGCCGG +
Preference number: 6 (lower is better)
Translates to: LPCLGPRTAPRW*RNPAGGRTCCR
Trigger: CCGGCAGCAGGTTCTGCCACCAGCTGGATTTCTCCACCAGCGGGGCGCTGTGCGTGGCCCTAAACAAGGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567114.5
CDS CCA 72 bp CGGCTGCCTTGTTTAGGGCCACGCACAGCGCCCCGCTaGTGGAGAAATCCAGCTGGTGGCAGAACCTGCTGC +
Preference number: 6 (lower is better)
Translates to: RLPCLGPRTAPR*WRNPAGGRTCC
Trigger: GCAGCAGGTTCTGCCACCAGCTGGATTTCTCCACCAGCGGGGCGCTGTGCGTGGCCCTAAACAAGGCAGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567114.5
CDS GCA 72 bp TTCAGGTCACCACTGGTGAGGACAGGGCCAGGGTGGTaGTCGGTCCTGGAGAATCTAGGCCAGCCAGACCCC +
Preference number: 6 (lower is better)
Translates to: FRSPLVRTGPGW*SVLENLGQPDP
Trigger: GGGGTCTGGCTGGCCTAGATTCTCCAGGACCGAGCACCACCCTGGCCCTGTCCTCACCAGTGGTGACCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562070.1
CDS CAA 90 bp ACACCGCCCACCCCAGACACACCCGTGAGCGGCTTCAGCAGCACTTaGGAGACAGGATCGCCTGCGTACAGCCCGTGTTCCAGAACCACG +
Preference number: 6 (lower is better)
Translates to: TPPTPDTPVSGFSST*ETGSPAYSPCSRTT
Trigger: CGTGGTTCTGGAACACGGGCTGTACGCAGGCGATCCTGTCTCCAAAGTGCTGCTGAAGCCGCTCACGGGTGTGTCTGGGGTGGGCGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562070.1
CDS GCA 72 bp TCCCGCCACGCCTTGCTGTCAATGCGAACGTCCCAGTaGTTGTTGACCACCAGGAAGTCGCGGCTCCGGTAC +
Preference number: 6 (lower is better)
Translates to: SRHALLSMRTSQ*LLTTRKSRLRY
Trigger: GTACCGGAGCCGCGACTTCCTGGTGGTCAACAAGCACTGGGACGTTCGCATTGACAGCAAGGCGTGGCGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000563560.1
ENST00000565503.5
ENST00000565809.5
ENST00000567283.5
CDS CAA 72 bp CGCCACGCCTTGCTGTCAATGCGAACGTCCCAGTGCTaGTTGACCACCAGGAAGTCGCGGCTCCGGTACACG +
Preference number: 6 (lower is better)
Translates to: RHALLSMRTSQC*LTTRKSRLRYT
Trigger: CGTGTACCGGAGCCGCGACTTCCTGGTGGTCAACAAGCACTGGGACGTTCGCATTGACAGCAAGGCGTGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000563560.1
ENST00000565503.5
ENST00000565809.5
ENST00000567283.5
CDS CAA 72 bp ACCCCAGACACACCCGTGAGCGGCTTCAGCAGCACTTaGGAGACAGGATCGCCTGCGTACAGCCCGTGTTCC +
Preference number: 6 (lower is better)
Translates to: TPDTPVSGFSST*ETGSPAYSPCS
Trigger: GGAACACGGGCTGTACGCAGGCGATCCTGTCTCCAAAGTGCTGCTGAAGCCGCTCACGGGTGTGTCTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562070.1
CDS CAA 90 bp GTCTCCCGCCACGCCTTGCTGTCAATGCGAACGTCCCAGTGCTTGTaGACCACCAGGAAGTCGCGGCTCCGGTACACGATGGACAGGTTC +
Preference number: 6 (lower is better)
Translates to: VSRHALLSMRTSQCL*TTRKSRLRYTMDRF
Trigger: GAACCTGTCCATCGTGTACCGGAGCCGCGACTTCCTGGTGGTCAACAAGCACTGGGACGTTCGCATTGACAGCAAGGCGTGGCGGGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000563560.1
ENST00000565503.5
ENST00000565809.5
ENST00000567283.5
CDS CAA 90 bp AGAGTCTCCCGCCACGCCTTGCTGTCAATGCGAACGTCCCAGTGCTaGTTGACCACCAGGAAGTCGCGGCTCCGGTACACGATGGACAGG +
Preference number: 6 (lower is better)
Translates to: RVSRHALLSMRTSQC*LTTRKSRLRYTMDR
Trigger: CCTGTCCATCGTGTACCGGAGCCGCGACTTCCTGGTGGTCAACAAGCACTGGGACGTTCGCATTGACAGCAAGGCGTGGCGGGAGACTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000563560.1
ENST00000565503.5
ENST00000565809.5
ENST00000567283.5
CDS CAA 90 bp CGGTACCGCAGCTGCTTCTGCAGGGTCAGAGTCTCCCGCCACGCCTaGCTGTCAATGCGAACGTCCCAGTGCTTGTTGACCACCAGGAAG +
Preference number: 6 (lower is better)
Translates to: RYRSCFCRVRVSRHA*LSMRTSQCLLTTRK
Trigger: CTTCCTGGTGGTCAACAAGCACTGGGACGTTCGCATTGACAGCAAGGCGTGGCGGGAGACTCTGACCCTGCAGAAGCAGCTGCGGTACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000563560.1
ENST00000565503.5
ENST00000565809.5
ENST00000567283.5
CDS CCA 72 bp CTGCCAATGGCATGGCTGATGGTTACCCGGCTCTCCTaGATGTGCCCCCGCAGCAGGTCTTACCAATGCCAG +
Preference number: 6 (lower is better)
Translates to: LPMAWLMVTRLS*MCPRSRSYQCQ
Trigger: CTGGCATTGGTAAGACCTGCTGCGGGGGCACATCCAGGAGAGCCGGGTAACCATCAGCCATGCCATTGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567283.5
CDS TCA 72 bp ACGCCTTGCTGTCAATGCGAACGTCCCAGTGCTTGTTaGCCACCAGGAAGTCGCGGCTCCGGTACACGATGG +
Preference number: 6 (lower is better)
Translates to: TPCCQCERPSAC*PPGSRGSGTRW
Trigger: CCATCGTGTACCGGAGCCGCGACTTCCTGGTGGTCAACAAGCACTGGGACGTTCGCATTGACAGCAAGGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000563560.1
ENST00000565503.5
ENST00000565809.5
ENST00000567283.5
CDS GCA 72 bp TGCTCAGGGTGGCCCAACATAAGCTTCGTGGCCCTGTaGCTCAGTTTCCCTTCTGTCACCACCAGGACACCG +
Preference number: 6 (lower is better)
Translates to: CSGWPNISFVAL*LSFPSVTTRTP
Trigger: CGGTGTCCTGGTGGTGACAGAAGGGAAACTGAGGCACAGGGCCACGAAGCTTATGTTGGGCCACCCTGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562070.1
CDS CAA 72 bp CACGCCTTGCTGTCAATGCGAACGTCCCAGTGCTTGTaGACCACCAGGAAGTCGCGGCTCCGGTACACGATG +
Preference number: 6 (lower is better)
Translates to: HALLSMRTSQCL*TTRKSRLRYTM
Trigger: CATCGTGTACCGGAGCCGCGACTTCCTGGTGGTCAACAAGCACTGGGACGTTCGCATTGACAGCAAGGCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000563560.1
ENST00000565503.5
ENST00000565809.5
ENST00000567283.5
CDS CAA 72 bp AGCTGCTTCTGCAGGGTCAGAGTCTCCCGCCACGCCTaGCTGTCAATGCGAACGTCCCAGTGCTTGTTGACC +
Preference number: 6 (lower is better)
Translates to: SCFCRVRVSRHA*LSMRTSQCLLT
Trigger: GGTCAACAAGCACTGGGACGTTCGCATTGACAGCAAGGCGTGGCGGGAGACTCTGACCCTGCAGAAGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000007264.7
ENST00000561734.5
ENST00000563560.1
ENST00000565503.5
ENST00000565809.5
ENST00000567283.5
CDS CCA 72 bp CAGCCCGTGTTCCAGAACCACGAGATCTGTGAGGCTTaGCTTTGGGTTCTCACAACCTGCCACACCCTGCGA +
Preference number: 6 (lower is better)
Translates to: QPVFQNHEICEA*LWVLTTCHTLR
Trigger: TCGCAGGGTGTGGCAGGTTGTGAGAACCCAAAGCCAAGCCTCACAGATCTCGTGGTTCTGGAACACGGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563560.1
ENST00000569601.5
CDS TCA 72 bp CTGCGTACAGCCCGTGTTCCAGAACCACGAGATCTGTaGGGCTTGGCTTTGGGTTCTCACAACCTGCCACAC +
Preference number: 6 (lower is better)
Translates to: LRTARVPEPRDL*GLALGSHNLPH
Trigger: GTGTGGCAGGTTGTGAGAACCCAAAGCCAAGCCTCACAGATCTCGTGGTTCTGGAACACGGGCTGTACGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563560.1
ENST00000569601.5
CDS TCA 72 bp TTAAGAACGCAGGAGTGCTTGTTGCCAGCTCTGCCCTaGTGCTCAGGGTGGCCCAACATAAGCTTCGTGGCC +
Preference number: 6 (lower is better)
Translates to: LRTQECLLPALP*CSGWPNISFVA
Trigger: GGCCACGAAGCTTATGTTGGGCCACCCTGAGCATCAGGGCAGAGCTGGCAACAAGCACTCCTGCGTTCTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562070.1
CDS TCA 72 bp CTGCGTACAGCCCGTGTTCCAGAACCACGAGATCTGTaGGGCTTGGCTTTGGGTTCTCACAACCAATGCCAG +
Preference number: 6 (lower is better)
Translates to: LRTARVPEPRDL*GLALGSHNQCQ
Trigger: CTGGCATTGGTTGTGAGAACCCAAAGCCAAGCCTCACAGATCTCGTGGTTCTGGAACACGGGCTGTACGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565809.5