RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RPTOR (Homo sapiens)

Ensembl gene IDs: ENSG00000141564

Ensembl transcript IDs: ENST00000306801.8, ENST00000544334.6, ENST00000570891.5, ENST00000572733.1, ENST00000573163.1, ENST00000573746.1, ENST00000573837.1, ENST00000574767.5, ENST00000575542.5, ENST00000576366.1, ENST00000577161.5, ENST00000649732.1

Found 1193 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCCAGCTGTCAGCCGAGGTCGCATCAGCATGGGCGGCTCAAGGCTaGAGACGGGGCTGGTGTCACCCGGAGCCGTCCGGGACCCGGCAG +
Preference number: 1 (lower is better)
Translates to: AQLSAEVASAWAAQG*RRGWCHPEPSGTRQ
Trigger: CTGCCGGGTCCCGGACGGCTCCGGGTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCTCGGCTGACAGCTGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR GCA 90 bp GAGGGACAGAGGCGCCGTGGCCGCGGGGGTGCACCTGGATGCTGGTaGTCAGTGGGAAGCCACCGTCAACCCGAGCCCTCCCCTTCCCTG +
Preference number: 1 (lower is better)
Translates to: EGQRRRGRGGAPGCW*SVGSHRQPEPSPSL
Trigger: CAGGGAAGGGGAGGGCTCGGGTTGACGGTGGCTTCCCACTGAGCACCAGCATCCAGGTGCACCCCCGCGGCCACGGCGCCTCTGTCCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR CCA 90 bp GGAGAGGGACAGAGGCGCCGTGGCCGCGGGGGTGCACCTGGATGCTaGTGCTCAGTGGGAAGCCACCGTCAACCCGAGCCCTCCCCTTCC +
Preference number: 1 (lower is better)
Translates to: GEGQRRRGRGGAPGC*CSVGSHRQPEPSPS
Trigger: GGAAGGGGAGGGCTCGGGTTGACGGTGGCTTCCCACTGAGCACCAGCATCCAGGTGCACCCCCGCGGCCACGGCGCCTCTGTCCCTCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR CCA 90 bp GCCGAGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTaGTGTCACCCGGAGCCGTCCGGGACCCGGCAGTGCCTCTTGCCT +
Preference number: 1 (lower is better)
Translates to: AEVASAWAAQGWRRG*CHPEPSGTRQCLLP
Trigger: AGGCAAGAGGCACTGCCGGGTCCCGGACGGCTCCGGGTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCTCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR GCA 90 bp ACAGGAGAGGGACAGAGGCGCCGTGGCCGCGGGGGTGCACCTGGATaGTGGTGCTCAGTGGGAAGCCACCGTCAACCCGAGCCCTCCCCT +
Preference number: 1 (lower is better)
Translates to: TGEGQRRRGRGGAPG*WCSVGSHRQPEPSP
Trigger: AGGGGAGGGCTCGGGTTGACGGTGGCTTCCCACTGAGCACCAGCATCCAGGTGCACCCCCGCGGCCACGGCGCCTCTGTCCCTCTCCTGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR CCA 90 bp CAGAACAGGAGAGGGACAGAGGCGCCGTGGCCGCGGGGGTGCACCTaGATGCTGGTGCTCAGTGGGAAGCCACCGTCAACCCGAGCCCTC +
Preference number: 1 (lower is better)
Translates to: QNRRGTEAPWPRGCT*MLVLSGKPPSTRAL
Trigger: GAGGGCTCGGGTTGACGGTGGCTTCCCACTGAGCACCAGCATCCAGGTGCACCCCCGCGGCCACGGCGCCTCTGTCCCTCTCCTGTTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR CCA 90 bp CTGTCTGCACCACAGGCCCAGCTGTCAGCCGAGGTCGCATCAGCATaGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACCCGGAGCCG +
Preference number: 1 (lower is better)
Translates to: LSAPQAQLSAEVASA*AAQGWRRGWCHPEP
Trigger: CGGCTCCGGGTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCTCGGCTGACAGCTGGGCCTGTGGTGCAGACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR GCA 90 bp AGACCACGCCGCCTGCATGTGTGTGCCCCCAGGTGCCGGCCGTGGTaGCATCTGCACATGCGTGTGCTACACCTGTGTGAGGGCACAGGC +
Preference number: 1 (lower is better)
Translates to: RPRRLHVCAPRCRPW*HLHMRVLHLCEGTG
Trigger: GCCTGTGCCCTCACACAGGTGTAGCACACGCATGTGCAGATGGCACCACGGCCGGCACCTGGGGGCACACACATGCAGGCGGCGTGGTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR GCA 90 bp TGGAGACGGGGCTGGTGTCACCCGGAGCCGTCCGGGACCCGGCAGTaGCTCTTGCCTGTATGTGAGGAACGTGTGGGGACAGAGCAGGGA +
Preference number: 1 (lower is better)
Translates to: WRRGWCHPEPSGTRQ*LLPVCEERVGTEQG
Trigger: TCCCTGCTCTGTCCCCACACGTTCCTCACATACAGGCAAGAGGCACTGCCGGGTCCCGGACGGCTCCGGGTGACACCAGCCCCGTCTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR CCA 90 bp GGGAGACCACGCCGCCTGCATGTGTGTGCCCCCAGGTGCCGGCCGTaGTGCCATCTGCACATGCGTGTGCTACACCTGTGTGAGGGCACA +
Preference number: 1 (lower is better)
Translates to: GRPRRLHVCAPRCRP*CHLHMRVLHLCEGT
Trigger: TGTGCCCTCACACAGGTGTAGCACACGCATGTGCAGATGGCACCACGGCCGGCACCTGGGGGCACACACATGCAGGCGGCGTGGTCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR GCA 90 bp GCCGCCTGCATGTGTGTGCCCCCAGGTGCCGGCCGTGGTGCCATCTaGACATGCGTGTGCTACACCTGTGTGAGGGCACAGGCATGGAGA +
Preference number: 1 (lower is better)
Translates to: AACMCVPPGAGRGAI*TCVCYTCVRAQAWR
Trigger: TCTCCATGCCTGTGCCCTCACACAGGTGTAGCACACGCATGTGCAGATGGCACCACGGCCGGCACCTGGGGGCACACACATGCAGGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR GCA 90 bp GACAGAGCAGGGAGACCACGCCGCCTGCATGTGTGTGCCCCCAGGTaGCGGCCGTGGTGCCATCTGCACATGCGTGTGCTACACCTGTGT +
Preference number: 1 (lower is better)
Translates to: DRAGRPRRLHVCAPR*RPWCHLHMRVLHLC
Trigger: ACACAGGTGTAGCACACGCATGTGCAGATGGCACCACGGCCGGCACCTGGGGGCACACACATGCAGGCGGCGTGGTCTCCCTGCTCTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR CCA 90 bp GCCAAATGTGACCAGGCAGGGTTCCATCCACCCAGAAGATGCTCTTaGCCACGGCAGGCCACCAGCCACACCGCAGGAGAGCCGGGCCTC +
Preference number: 1 (lower is better)
Translates to: AKCDQAGFHPPRRCS*PRQATSHTAGEPGL
Trigger: GAGGCCCGGCTCTCCTGCGGTGTGGCTGGTGGCCTGCCGTGGCCAAGAGCATCTTCTGGGTGGATGGAACCCTGCCTGGTCACATTTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR CCA 90 bp GCAGGGCTCGGCATCCCCAGAAGGGCCGGCAGGTTCACATCACTCTaGGGAGGAGGGCGGGGATACTCACGCTGTCCACTGCGAGGATCT +
Preference number: 1 (lower is better)
Translates to: AGLGIPRRAGRFTSL*GGGRGYSRCPLRGS
Trigger: AGATCCTCGCAGTGGACAGCGTGAGTATCCCCGCCCTCCTCCCCAGAGTGATGTGAACCTGCCGGCCCTTCTGGGGATGCCGAGCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR TCA 90 bp CGATGGGCAGCTGTTCGGGTGGGTTTCGGTTCTCCACGCCCATGGTaGGCCACACCTGGAATGCGGTCAGCTGCTCGGCGAAGAACGGGC +
Preference number: 1 (lower is better)
Translates to: RWAAVRVGFGSPRPW*ATPGMRSAARRRTG
Trigger: GCCCGTTCTTCGCCGAGCAGCTGACCGCATTCCAGGTGTGGCTCACCATGGGCGTGGAGAACCGAAACCCACCCGAACAGCTGCCCATCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR GCA 90 bp CGGTTCTCCACGCCCATGGTGAGCCACACCTGGAATGCGGTCAGCTaGTCGGCGAAGAACGGGCTGTGCCGAAACGCAGTGCCTTCCTCG +
Preference number: 1 (lower is better)
Translates to: RFSTPMVSHTWNAVS*SAKNGLCRNAVPSS
Trigger: CGAGGAAGGCACTGCGTTTCGGCACAGCCCGTTCTTCGCCGAGCAGCTGACCGCATTCCAGGTGTGGCTCACCATGGGCGTGGAGAACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR TCA 90 bp GCTTCTGGAAGATTCTGGTGTTGCCGCCTGGCACGCCCTGTGAGCTaGGTGAGGCCGGGACTCTCTACACCTTCCGGACCCGGGCTGCTT +
Preference number: 1 (lower is better)
Translates to: ASGRFWCCRLARPVS*VRPGLSTPSGPGLL
Trigger: AAGCAGCCCGGGTCCGGAAGGTGTAGAGAGTCCCGGCCTCACTCAGCTCACAGGGCGTGCCAGGCGGCAACACCAGAATCTTCCAGAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR TCA 90 bp GGGCGGGGATACTCACGCTGTCCACTGCGAGGATCTTGGCCCAGATaGAAACGAGAAGTGGCCGCAGCTCTCGGGCCGAGCTCTGGAGCA +
Preference number: 1 (lower is better)
Translates to: GRGYSRCPLRGSWPR*KREVAAALGPSSGA
Trigger: TGCTCCAGAGCTCGGCCCGAGAGCTGCGGCCACTTCTCGTTTTCATCTGGGCCAAGATCCTCGCAGTGGACAGCGTGAGTATCCCCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR GCA 90 bp TGCATGTGTGTGCCCCCAGGTGCCGGCCGTGGTGCCATCTGCACATaGGTGTGCTACACCTGTGTGAGGGCACAGGCATGGAGACCACAG +
Preference number: 1 (lower is better)
Translates to: CMCVPPGAGRGAICT*VCYTCVRAQAWRPQ
Trigger: CTGTGGTCTCCATGCCTGTGCCCTCACACAGGTGTAGCACACGCATGTGCAGATGGCACCACGGCCGGCACCTGGGGGCACACACATGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR GCA 90 bp TCTCTGGCCAAATGTGACCAGGCAGGGTTCCATCCACCCAGAAGATaGTCTTGGCCACGGCAGGCCACCAGCCACACCGCAGGAGAGCCG +
Preference number: 1 (lower is better)
Translates to: SLAKCDQAGFHPPRR*SWPRQATSHTAGEP
Trigger: CGGCTCTCCTGCGGTGTGGCTGGTGGCCTGCCGTGGCCAAGAGCATCTTCTGGGTGGATGGAACCCTGCCTGGTCACATTTGGCCAGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR GCA 90 bp CGGGAGGTCGGGGATCATGGGCAGCAGCTCGGTGGCCTCGCAGGCTaGCAGCTGGATGCAGTTTTTCATCGACGGAGGCAAAGGCATCTG +
Preference number: 1 (lower is better)
Translates to: REVGDHGQQLGGLAG*QLDAVFHRRRQRHL
Trigger: CAGATGCCTTTGCCTCCGTCGATGAAAAACTGCATCCAGCTGGCAGCCTGCGAGGCCACCGAGCTGCTGCCCATGATCCCCGACCTCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR GCA 90 bp GGGTGGGTTTCGGTTCTCCACGCCCATGGTGAGCCACACCTGGAATaGGGTCAGCTGCTCGGCGAAGAACGGGCTGTGCCGAAACGCAGT +
Preference number: 1 (lower is better)
Translates to: GWVSVLHAHGEPHLE*GQLLGEERAVPKRS
Trigger: ACTGCGTTTCGGCACAGCCCGTTCTTCGCCGAGCAGCTGACCGCATTCCAGGTGTGGCTCACCATGGGCGTGGAGAACCGAAACCCACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR CCA 90 bp ACTCTCTACACCTTCCGGACCCGGGCTGCTTTCTCGGCCCAGACGTaGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGC +
Preference number: 1 (lower is better)
Translates to: TLYTFRTRAAFSAQT*GWDSCRNLLLVGAR
Trigger: GCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAAAGCAGCCCGGGTCCGGAAGGTGTAGAGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR GCA 90 bp CGGACCCGGGCTGCTTTCTCGGCCCAGACGTGGGGATGGGATTCGTaGCGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGC +
Preference number: 1 (lower is better)
Translates to: RTRAAFSAQTWGWDS*RNLLLVGARIPKRS
Trigger: GCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAAAGCAGCCCGGGTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR CCA 90 bp TACACCTTCCGGACCCGGGCTGCTTTCTCGGCCCAGACGTGGGGATaGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCATTCCA +
Preference number: 1 (lower is better)
Translates to: YTFRTRAAFSAQTWG*DSCRNLLLVGARIP
Trigger: TGGAATGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAAAGCAGCCCGGGTCCGGAAGGTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR CCA 90 bp GAAGGACTGGATGGGAAGCTGCGTGTGCGGGTGGAGCTGGGCTTCTaGAAGATTCTGGTGTTGCCGCCTGGCACGCCCTGTGAGCTGAGT +
Preference number: 1 (lower is better)
Translates to: EGLDGKLRVRVELGF*KILVLPPGTPCELS
Trigger: ACTCAGCTCACAGGGCGTGCCAGGCGGCAACACCAGAATCTTCCAGAAGCCCAGCTCCACCCGCACACGCAGCTTCCCATCCAGTCCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR CCA 90 bp TGTTCGGGTGGGTTTCGGTTCTCCACGCCCATGGTGAGCCACACCTaGAATGCGGTCAGCTGCTCGGCGAAGAACGGGCTGTGCCGAAAC +
Preference number: 1 (lower is better)
Translates to: CSGGFRFSTPMVSHT*NAVSCSAKNGLCRN
Trigger: GTTTCGGCACAGCCCGTTCTTCGCCGAGCAGCTGACCGCATTCCAGGTGTGGCTCACCATGGGCGTGGAGAACCGAAACCCACCCGAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR TCA 90 bp GCTCGGCGAAGAACGGGCTGTGCCGAAACGCAGTGCCTTCCTCGATaGTCGTCGGCAGCTGAGACAGACAGATGTCAACAGCCAGGTCCC +
Preference number: 1 (lower is better)
Translates to: ARRRTGCAETQCLPR*SSAAETDRCQQPGP
Trigger: GGGACCTGGCTGTTGACATCTGTCTGTCTCAGCTGCCGACGATCATCGAGGAAGGCACTGCGTTTCGGCACAGCCCGTTCTTCGCCGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR GCA 90 bp GTTTCCCGAATTTCCAGTGTCCCCCAGCTGGCTAGGAAATGTCCCTaGTTGCGTGCACTGACTGTGAGAGGTGGTGGGCCTGGCTGGGGC +
Preference number: 1 (lower is better)
Translates to: VSRISSVPQLARKCP*LRALTVRGGGPGWG
Trigger: GCCCCAGCCAGGCCCACCACCTCTCACAGTCAGTGCACGCAAGCAGGGACATTTCCTAGCCAGCTGGGGGACACTGGAAATTCGGGAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR CCA 90 bp CACGCTGTCCACTGCGAGGATCTTGGCCCAGATGAAAACGAGAAGTaGCCGCAGCTCTCGGGCCGAGCTCTGGAGCAGCTTCAGCACGTA +
Preference number: 1 (lower is better)
Translates to: HAVHCEDLGPDENEK*PQLSGRALEQLQHV
Trigger: TACGTGCTGAAGCTGCTCCAGAGCTCGGCCCGAGAGCTGCGGCCACTTCTCGTTTTCATCTGGGCCAAGATCCTCGCAGTGGACAGCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR TCA 90 bp GGTGCTCAGTGGGAAGCCACCGTCAACCCGAGCCCTCCCCTTCCCTaGCATTCCAGACACGACAGCGAAGACAGACAAAAGCGAGTAGCA +
Preference number: 1 (lower is better)
Translates to: GAQWEATVNPSPPLP*HSRHDSEDRQKRVA
Trigger: TGCTACTCGCTTTTGTCTGTCTTCGCTGTCGTGTCTGGAATGTCAGGGAAGGGGAGGGCTCGGGTTGACGGTGGCTTCCCACTGAGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR GCA 90 bp AGACACGACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTaGCGTCATCAGCAGCTAAGGCAGCAGCCAACGTTCACACTGCGG +
Preference number: 1 (lower is better)
Translates to: RHDSEDRQKRVAGPS*RHQQLRQQPTFTLR
Trigger: CCGCAGTGTGAACGTTGGCTGCTGCCTTAGCTGCTGATGACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTCGTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR TCA 90 bp ACACCAGCTCTCACTCCCGTGGTCGTGGGCCTCTCACCGCCAGAATaGAGCCACCTGGCTCCTTCACCTCTCAATAATCCTGATTCCCGA +
Preference number: 1 (lower is better)
Translates to: TPALTPVVVGLSPPE*SHLAPSPLNNPDSR
Trigger: TCGGGAATCAGGATTATTGAGAGGTGAAGGAGCCAGGTGGCTTCATTCTGGCGGTGAGAGGCCCACGACCACGGGAGTGAGAGCTGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR CCA 90 bp TCACTCCCGTGGTCGTGGGCCTCTCACCGCCAGAATGAAGCCACCTaGCTCCTTCACCTCTCAATAATCCTGATTCCCGACGAACACGGA +
Preference number: 1 (lower is better)
Translates to: SLPWSWASHRQNEAT*LLHLSIILIPDEHG
Trigger: TCCGTGTTCGTCGGGAATCAGGATTATTGAGAGGTGAAGGAGCCAGGTGGCTTCATTCTGGCGGTGAGAGGCCCACGACCACGGGAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR GCA 90 bp ATCATTGTGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTaGGGCCCCTCCTGGGCGGGACTGTCCACACAGCTCCTGTCTGCA +
Preference number: 1 (lower is better)
Translates to: IIVVVFCLQNCSYTP*GPSWAGLSTQLLSA
Trigger: TGCAGACAGGAGCTGTGTGGACAGTCCCGCCCAGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCACAATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR GCA 90 bp TCTAAAAGGTTAGAAACTCTCTTGCAAAGTGCTACCCTCCCGAGTTaGAGAGCTGTGAGGCTTCAGCCGGCCGCTGCTCCCGTGCAGTCC +
Preference number: 1 (lower is better)
Translates to: SKRLETLLQSATLPS*RAVRLQPAAAPVQS
Trigger: GGACTGCACGGGAGCAGCGGCCGGCTGAAGCCTCACAGCTCTGCAACTCGGGAGGGTAGCACTTTGCAAGAGAGTTTCTAACCTTTTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
3UTR GCA 90 bp AACGCGTGTTGGGTAAGAATTGAGTTGAAGGACTGGATGGGAAGCTaGGTGTGCGGGTGGAGCTGGGCTTCTGGAAGATTCTGGTGTTGC +
Preference number: 1 (lower is better)
Translates to: NACWVRIELKDWMGS*VCGWSWASGRFWCC
Trigger: GCAACACCAGAATCTTCCAGAAGCCCAGCTCCACCCGCACACGCAGCTTCCCATCCAGTCCTTCAACTCAATTCTTACCCAACACGCGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR GCA 90 bp CGATCAAGCCAGCATTGGAGCAGTCGTAGACGAAGATCGACGGGCTaGCCATCCACGTCTGCAGGTCATATATGGACAGAGGGATGTACT +
Preference number: 1 (lower is better)
Translates to: RSSQHWSSRRRRSTG*PSTSAGHIWTEGCT
Trigger: AGTACATCCCTCTGTCCATATATGACCTGCAGACGTGGATGGGCAGCCCGTCGATCTTCGTCTACGACTGCTCCAATGCTGGCTTGATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR TCA 90 bp GTGATTTTGTCTCAAAACAAACAGAAACGCGTGTTGGGTAAGAATTaGGTTGAAGGACTGGATGGGAAGCTGCGTGTGCGGGTGGAGCTG +
Preference number: 1 (lower is better)
Translates to: VILSQNKQKRVLGKN*VEGLDGKLRVRVEL
Trigger: CAGCTCCACCCGCACACGCAGCTTCCCATCCAGTCCTTCAACTCAATTCTTACCCAACACGCGTTTCTGTTTGTTTTGAGACAAAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR GCA 90 bp GTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGGAGCGGGGGCGACCTCGCCAAGGACCTaGCTCCCCTGTGCACCGCCA +
Preference number: 2 (lower is better)
Translates to: VQAARGAHGGGLQGGAGATSPRT*LPCAPP
Trigger: TGGCGGTGCACAGGGGAGGCAGGTCCTTGGCGAGGT...CGCCCCCGCTCCACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR GCA 90 bp GTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGGAGCGGGGGCGGGGGAGGGTGGGCTGTaGGCTTCCTGCTCAGTGATG +
Preference number: 2 (lower is better)
Translates to: VQAARGAHGGGLQGGAGAGEGGL*ASCSVM
Trigger: CATCACTGAGCAGGAAGCGCACAGCCCACCCTCCCC...CGCCCCCGCTCCACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CCA 90 bp AGACAGCCCACGTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGTACAGCAGGCGGCCGTaGCCTGGTGGGCCCGGGTCA +
Preference number: 2 (lower is better)
Translates to: RQPTCRRHAVPMGVGSRVYSRRP*PGGPGS
Trigger: TGACCCGGGCCCACCAGGCCACGGCCGCCTGCTGTA...CACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCACGTGGGCTGTCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CCA 90 bp GGAGGGGCCGCCTCTGTCCTGCCTTGTCACGTCCCGGCCAGCCCCAGCTCAGTCGGTGGTGGGCCTGGCTaGGGCAGCGCCTCTCGCTCG +
Preference number: 2 (lower is better)
Translates to: GGAASVLPCHVPASPSSVGGGPG*GSASRS
Trigger: CGAGCGAGAGGCGCTGCCCCAGCCAGGCCCACCACC...GACTGAGCTGGGGCTGGCCGGGACGTGACAAGGCAGGACAGAGGCGGCCCCTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR TCA 90 bp GCCAGGTCCCAGGCTTGCCACATGGCGTGCATGTACGTGGGCGGCAGACGCGGGCCCAGACCTCCCCGTTaGCTGTGGGCCGGGGCACCC +
Preference number: 2 (lower is better)
Translates to: ARSQACHMACMYVGGRRGPRPPR*LWAGAP
Trigger: GGGTGCCCCGGCCCACAGTCAACGGGGAGGTCTGGG...CCCGCGTCTGCCGCCCACGTACATGCACGCCATGTGGCAAGCCTGGGACCTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR-3UTR GCA 90 bp GGAGGGGCCGCCTCTGTCCTGCCTTGTCACGTCCCGGCCAGCCCCAGCTCAGTCAGGAGCCCCAGCGCCTaGCTCTCCGCCAGGGCTCTG +
Preference number: 2 (lower is better)
Translates to: GGAASVLPCHVPASPSSVRSPSA*LSARAL
Trigger: CAGAGCCCTGGCGGAGAGGCAGGCGCTGGGGCTCCT...GACTGAGCTGGGGCTGGCCGGGACGTGACAAGGCAGGACAGAGGCGGCCCCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR GCA 90 bp GCAGGCCACCAGCCACACCGCAGGAGAGCCGGGCCTCGCCACACCAGCTCTCACGACCACAGGTCGGGCTaGTGTCCCCGCGCCTGTGGG +
Preference number: 2 (lower is better)
Translates to: AGHQPHRRRAGPRHTSSHDHRSG*CPRACG
Trigger: CCCACAGGCGCGGGGACAGCAGCCCGACCTGTGGTC...GTGAGAGCTGGTGTGGCGAGGCCCGGCTCTCCTGCGGTGTGGCTGGTGGCCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR GCA 90 bp GTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGGAGCGGGGGCGGGAAGATTCTGGTGTTaGCGCCTGGCACGCCCTGTG +
Preference number: 2 (lower is better)
Translates to: VQAARGAHGGGLQGGAGAGRFWC*RLARPV
Trigger: CACAGGGCGTGCCAGGCGGCAACACCAGAATCTTCC...CGCCCCCGCTCCACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR TCA 90 bp GTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGGAGCGGGGGCGGCTGACAGCTCTGTGTaGGAGGGGCCAAAACTGGAG +
Preference number: 2 (lower is better)
Translates to: VQAARGAHGGGLQGGAGAADSSV*EGPKLE
Trigger: CTCCAGTTTTGGCCCCTCTCACACAGAGCTGTCAGC...CGCCCCCGCTCCACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CCA 90 bp AGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACCCGGGGTGGTGGGCCTGGCTaGGGCAGCGCCTCTCGCTCG +
Preference number: 2 (lower is better)
Translates to: RSHQHGRLKAGDGAGVTRGGGPG*GSASRS
Trigger: CGAGCGAGAGGCGCTGCCCCAGCCAGGCCCACCACC...CCGGGTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR TCA 90 bp GGAGGGGCCGCCTCTGTCCTGCCTTGTCACGTCCCGGCCAGCCCCAGCTCAGTCCACAGCGGCCCCTGCTaGCAGCTCTGTGTGAGAGGG +
Preference number: 2 (lower is better)
Translates to: GGAASVLPCHVPASPSSVHSGPC*QLCVRG
Trigger: CCCTCTCACACAGAGCTGTCAGCAGGGGCCGCTGTG...GACTGAGCTGGGGCTGGCCGGGACGTGACAAGGCAGGACAGAGGCGGCCCCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR GCA 90 bp GGAGGGGCCGCCTCTGTCCTGCCTTGTCACGTCCCGGCCAGCCCCAGCTCAGTCGGAGACCACGCCGCCTaGATGTGTGTGCCCCCAGGT +
Preference number: 2 (lower is better)
Translates to: GGAASVLPCHVPASPSSVGDHAA*MCVPPG
Trigger: ACCTGGGGGCACACACATGCAGGCGGCGTGGTCTCC...GACTGAGCTGGGGCTGGCCGGGACGTGACAAGGCAGGACAGAGGCGGCCCCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CCA 90 bp AGACAGCCCACGTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGCCTCTCGCTCGCTCTTaGCCTGATGGGGACAGCTGC +
Preference number: 2 (lower is better)
Translates to: RQPTCRRHAVPMGVGSRVPLARS*PDGDSC
Trigger: GCAGCTGTCCCCATCAGGCCAAGAGCGAGCGAGAGG...CACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCACGTGGGCTGTCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CCA 90 bp GCAGGCCACCAGCCACACCGCAGGAGAGCCGGGCCTCGCCACACCAGCTCTCACCCCAGGTGCCGGCCGTaGTGCCATCTGCACATGCGT +
Preference number: 2 (lower is better)
Translates to: AGHQPHRRRAGPRHTSSHPRCRP*CHLHMR
Trigger: ACGCATGTGCAGATGGCACCACGGCCGGCACCTGGG...GTGAGAGCTGGTGTGGCGAGGCCCGGCTCTCCTGCGGTGTGGCTGGTGGCCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR GCA 90 bp GCCGGGCCTCGCCACACCAGCTCTCACTCCCGTGGTCGTGGGCCTCTCACCGCCGGCCGTGGTGCCATCTaGACATGCGTGTGCTACACC +
Preference number: 2 (lower is better)
Translates to: AGPRHTSSHSRGRGPLTAGRGAI*TCVCYT
Trigger: GGTGTAGCACACGCATGTGCAGATGGCACCACGGCC...GGCGGTGAGAGGCCCACGACCACGGGAGTGAGAGCTGGTGTGGCGAGGCCCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CCA 90 bp GCCGGGCCTCGCCACACCAGCTCTCACTCCCGTGGTCGTGGGCCTCTCACCGCCGATGCTGGTGCTCAGTaGGAAGCCACCGTCAACCCG +
Preference number: 2 (lower is better)
Translates to: AGPRHTSSHSRGRGPLTADAGAQ*EATVNP
Trigger: CGGGTTGACGGTGGCTTCCCACTGAGCACCAGCATC...GGCGGTGAGAGGCCCACGACCACGGGAGTGAGAGCTGGTGTGGCGAGGCCCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR CAA 90 bp CGGGGCTGGTGTCACCCGGAGCCGTCCGGGACCCGGCAGTGCCTCTaGCCTGTATGTGAGGAACGTGTGGGGACAGAGCAGGGAGACCAC +
Preference number: 2 (lower is better)
Translates to: RGWCHPEPSGTRQCL*PVCEERVGTEQGDH
Trigger: GTGGTCTCCCTGCTCTGTCCCCACACGTTCCTCACATACAGGCAAGAGGCACTGCCGGGTCCCGGACGGCTCCGGGTGACACCAGCCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR TCA 90 bp ACGGCAGGCCACCAGCCACACCGCAGGAGAGCCGGGCCTCGCCACACCAGCTCTAGCCCTCCCCTTCCCTaGCATTCCAGACACGACAGC +
Preference number: 2 (lower is better)
Translates to: TAGHQPHRRRAGPRHTSSSPPLP*HSRHDS
Trigger: GCTGTCGTGTCTGGAATGTCAGGGAAGGGGAGGGCT...AGAGCTGGTGTGGCGAGGCCCGGCTCTCCTGCGGTGTGGCTGGTGGCCTGCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR TCA 90 bp GTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGGAGCGGGGGCGGAGCCACCTGCCTTTTaGCAGGTGGTGATTTTGTCT +
Preference number: 2 (lower is better)
Translates to: VQAARGAHGGGLQGGAGAEPPAF*QVVILS
Trigger: AGACAAAATCACCACCTGTCAAAAGGCAGGTGGCTC...CGCCCCCGCTCCACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR GCA 90 bp GGAGGGGCCGCCTCTGTCCTGCCTTGTCACGTCCCGGCCAGCCCCAGCTCAGTCTCCGGGACCCGGCAGTaGCTCTTGCCTGTATGTGAG +
Preference number: 2 (lower is better)
Translates to: GGAASVLPCHVPASPSSVSGTRQ*LLPVCE
Trigger: CTCACATACAGGCAAGAGGCACTGCCGGGTCCCGGA...GACTGAGCTGGGGCTGGCCGGGACGTGACAAGGCAGGACAGAGGCGGCCCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR TCA 90 bp GAGCAGCCCTTCGGAGGGAAAGGAGCCCCGTGGATTAAGGCAGGGGCTACCTCGCGCTCGCTCTTGGCCTaGTGGGGACAGCTGCCCCAG +
Preference number: 2 (lower is better)
Translates to: EQPFGGKGAPWIKAGATSRSLLA*WGQLPQ
Trigger: CTGGGGCAGCTGTCCCCATCAGGCCAAGAGCGAGCG...CGAGGTAGCCCCTGCCTTAATCCACGGGGCTCCTTTCCCTCCGAAGGGCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR TCA 90 bp AGACAGCCCACGTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGCCTCTTGCCTGTATGTaGGGAACGTGTGGGGACAGA +
Preference number: 2 (lower is better)
Translates to: RQPTCRRHAVPMGVGSRVPLACM*GTCGDR
Trigger: TCTGTCCCCACACGTTCCTCACATACAGGCAAGAGG...CACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCACGTGGGCTGTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR GCA 90 bp GCCGGGCCTCGCCACACCAGCTCTCACTCCCGTGGTCGTGGGCCTCTCACCGCCATGTCCCTGCTTGCGTaGACTGACTGTGAGAGGTGG +
Preference number: 2 (lower is better)
Translates to: AGPRHTSSHSRGRGPLTAMSLLA*TDCERW
Trigger: CCACCTCTCACAGTCAGTGCACGCAAGCAGGGACAT...GGCGGTGAGAGGCCCACGACCACGGGAGTGAGAGCTGGTGTGGCGAGGCCCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CCA 90 bp CACAGGTCGGGCTGCTGTCCCCGCGCCTGTGGGGAAGAGCAGCCCTTCGGAGGGCCAGTGTCCCCCAGCTaGCTAGGAAATGTCCCTGCT +
Preference number: 2 (lower is better)
Translates to: HRSGCCPRACGEEQPFGGPVSPS*LGNVPA
Trigger: AGCAGGGACATTTCCTAGCCAGCTGGGGGACACTGG...CCCTCCGAAGGGCTGCTCTTCCCCACAGGCGCGGGGACAGCAGCCCGACCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CCA 90 bp GTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGGAGCGGGGGCGCAGAATGAAGCCACCTaGCTCCTTCACCTCTCAATA +
Preference number: 2 (lower is better)
Translates to: VQAARGAHGGGLQGGAGAQNEAT*LLHLSI
Trigger: TATTGAGAGGTGAAGGAGCCAGGTGGCTTCATTCTG...CGCCCCCGCTCCACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR TCA 90 bp GCCGAGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACCCGTGCCCCGGCGAGTaGCAGCTTCACTATGTACAG +
Preference number: 2 (lower is better)
Translates to: AEVASAWAAQGWRRGWCHPCPGE*QLHYVQ
Trigger: CTGTACATAGTGAAGCTGTCACTCGCCGGGGCACGG...GTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCTCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR GCA 90 bp AGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACCCGGGCACCTGGATGCTGGTaGTCAGTGGGAAGCCACCGT +
Preference number: 2 (lower is better)
Translates to: RSHQHGRLKAGDGAGVTRAPGCW*SVGSHR
Trigger: ACGGTGGCTTCCCACTGAGCACCAGCATCCAGGTGC...CCGGGTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR GCA 90 bp CAAAAAGGAGCAGCGGAGGGGCCGCCTCTGTCCTGCCTTGTCACGTCCCGGCCAGGGGGTGCACCTGGATaGTGGTGCTCAGTGGGAAGC +
Preference number: 2 (lower is better)
Translates to: QKGAAEGPPLSCLVTSRPGGAPG*WCSVGS
Trigger: GCTTCCCACTGAGCACCAGCATCCAGGTGCACCCCC...TGGCCGGGACGTGACAAGGCAGGACAGAGGCGGCCCCTCCGCTGCTCCTTTTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR GCA 90 bp ACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCGCCTAGGAGCCCCAGCGCCTaGCTCTCCGCCAGGGCTCTG +
Preference number: 2 (lower is better)
Translates to: TFFWWELAFQKGAAEGPPRSPSA*LSARAL
Trigger: CAGAGCCCTGGCGGAGAGGCAGGCGCTGGGGCTCCT...AGGCGGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR GCA 90 bp CGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCGACCTGCCTCCCCTGTaGACCGCCACAGCGGCCCCT +
Preference number: 2 (lower is better)
Translates to: RNLLLVGARIPKRSSGGADLPPL*TATAAP
Trigger: AGGGGCCGCTGTGGCGGTGCACAGGGGAGGCAGGTC...GGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR GCA 90 bp ACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCGCCTGACCTGCCTCCCCTGTaGACCGCCACAGCGGCCCCT +
Preference number: 2 (lower is better)
Translates to: TFFWWELAFQKGAAEGPPDLPPL*TATAAP
Trigger: AGGGGCCGCTGTGGCGGTGCACAGGGGAGGCAGGTC...AGGCGGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR GCA 90 bp GCCGGGCCTCGCCACACCAGCTCTCACTCCCGTGGTCGTGGGCCTCTCACCGCCATCTGCACATGCGTGTaGTACACCTGTGTGAGGGCA +
Preference number: 2 (lower is better)
Translates to: AGPRHTSSHSRGRGPLTAICTCV*YTCVRA
Trigger: TGCCCTCACACAGGTGTAGCACACGCATGTGCAGAT...GGCGGTGAGAGGCCCACGACCACGGGAGTGAGAGCTGGTGTGGCGAGGCCCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR GCA 90 bp CCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCAGTGTGTGCCCCCAGGTaGCGGCCGTGGTGCCATCTG +
Preference number: 2 (lower is better)
Translates to: PRRGDGIRAGTFFWWELAVCAPR*RPWCHL
Trigger: CAGATGGCACCACGGCCGGCACCTGGGGGCACACAC...TGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR GCA 90 bp GCCGAGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACTCCGGGACCCGGCAGTaGCTCTTGCCTGTATGTGAG +
Preference number: 2 (lower is better)
Translates to: AEVASAWAAQGWRRGWCHSGTRQ*LLPVCE
Trigger: CTCACATACAGGCAAGAGGCACTGCCGGGTCCCGGA...GTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCTCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CCA 90 bp CGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCGAGAGGTGGTGGGCCTaGCTGGGGCAGCGCCTCTCG +
Preference number: 2 (lower is better)
Translates to: RNLLLVGARIPKRSSGGAERWWA*LGQRLS
Trigger: CGAGAGGCGCTGCCCCAGCCAGGCCCACCACCTCTC...GGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CCA 90 bp AGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACCCGGGGGAAAGGAGCCCCGTaGATTAAGGCAGGGGCTACC +
Preference number: 2 (lower is better)
Translates to: RSHQHGRLKAGDGAGVTRGKGAP*IKAGAT
Trigger: GGTAGCCCCTGCCTTAATCCACGGGGCTCCTTTCCC...CCGGGTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CCA 90 bp ACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCGCCTGGCTGGAGACGGGGCTaGTGTCACCCGGAGCCGTCC +
Preference number: 2 (lower is better)
Translates to: TFFWWELAFQKGAAEGPPGWRRG*CHPEPS
Trigger: GGACGGCTCCGGGTGACACCAGCCCCGTCTCCAGCC...AGGCGGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR CAA 90 bp AAGCTGCGTGTGCGGGTGGAGCTGGGCTTCTGGAAGATTCTGGTGTaGCCGCCTGGCACGCCCTGTGAGCTGAGTGAGGCCGGGACTCTC +
Preference number: 2 (lower is better)
Translates to: KLRVRVELGFWKILV*PPGTPCELSEAGTL
Trigger: GAGAGTCCCGGCCTCACTCAGCTCACAGGGCGTGCCAGGCGGCAACACCAGAATCTTCCAGAAGCCCAGCTCCACCCGCACACGCAGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR TCA 90 bp ACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCGCCTCGCTCGCTCTTGGCCTaGTGGGGACAGCTGCCCCAG +
Preference number: 2 (lower is better)
Translates to: TFFWWELAFQKGAAEGPPRSLLA*WGQLPQ
Trigger: CTGGGGCAGCTGTCCCCATCAGGCCAAGAGCGAGCG...AGGCGGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR TCA 90 bp GCCGAGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACTGTGCTACACCTGTGTaGGGGCACAGGCATGGAGAC +
Preference number: 2 (lower is better)
Translates to: AEVASAWAAQGWRRGWCHCATPV*GHRHGD
Trigger: GTCTCCATGCCTGTGCCCTCACACAGGTGTAGCACA...GTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCTCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR GCA 90 bp CCCGGCAGTGCCTCTTGCCTGTATGTGAGGAACGTGTGGGGACAGAGCAGGGAGAGCCAACGTTCACACTaGGGGGCCGCAGCAGCCGAC +
Preference number: 2 (lower is better)
Translates to: PGSASCLYVRNVWGQSRESQRSH*GAAAAD
Trigger: GTCGGCTGCTGCGGCCCCGCAGTGTGAACGTTGGCT...CTCCCTGCTCTGTCCCCACACGTTCCTCACATACAGGCAAGAGGCACTGCCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR GCA 90 bp CACAGGTCGGGCTGCTGTCCCCGCGCCTGTGGGGAAGAGCAGCCCTTCGGAGGGGCTAGGAAATGTCCCTaGTTGCGTGCACTGACTGTG +
Preference number: 2 (lower is better)
Translates to: HRSGCCPRACGEEQPFGGARKCP*LRALTV
Trigger: CACAGTCAGTGCACGCAAGCAGGGACATTTCCTAGC...CCCTCCGAAGGGCTGCTCTTCCCCACAGGCGCGGGGACAGCAGCCCGACCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR GCA 90 bp CCGTGGTCGTGGGCCTCTCACCGCCAGAATGAAGCCACCTGGCTCCTTCACCTCAGGTGCCGGCCGTGGTaGCATCTGCACATGCGTGTG +
Preference number: 2 (lower is better)
Translates to: PWSWASHRQNEATWLLHLRCRPW*HLHMRV
Trigger: CACACGCATGTGCAGATGGCACCACGGCCGGCACCT...GAGGTGAAGGAGCCAGGTGGCTTCATTCTGGCGGTGAGAGGCCCACGACCACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR GCA 90 bp AGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACCCGGCCCGGCAGTGCCTCTTaGCTGTATGTGAGGAACGTG +
Preference number: 2 (lower is better)
Translates to: RSHQHGRLKAGDGAGVTRPGSAS*LYVRNV
Trigger: CACGTTCCTCACATACAGGCAAGAGGCACTGCCGGG...CCGGGTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR GCA 90 bp AGACAGCCCACGTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGTTCTGTTTGCAAAACTaGTCATACACGCCCTGCGGC +
Preference number: 2 (lower is better)
Translates to: RQPTCRRHAVPMGVGSRVFCLQN*SYTPCG
Trigger: GCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAA...CACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCACGTGGGCTGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR GCA 90 bp GCTTCAGCCGGCCGCTGCTCCCGTGCAGTCCTAAAAGGCCCTCCAAGGCTTCTGTCCATGACATCACAGTaGCACGGAGGGCGGGGGAGC +
Preference number: 2 (lower is better)
Translates to: ASAGRCSRAVLKGPPRLLSMTSQ*HGGRGS
Trigger: GCTCCCCCGCCCTCCGTGGCACTGTGATGTCATGGA...CAGAAGCCTTGGAGGGCCTTTTAGGACTGCACGGGAGCAGCGGCCGGCTGAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570891.5
3UTR-3UTR GCA 90 bp GGGGATCATGGGCAGCAGCTCGGTGGCCTCGCAGGCTGCCAGCTGGATGCAGTTCGAAGATCGACGGGCTaGCCATCCACGTCTGCAGGT +
Preference number: 2 (lower is better)
Translates to: GDHGQQLGGLAGCQLDAVRRSTG*PSTSAG
Trigger: ACCTGCAGACGTGGATGGGCAGCCCGTCGATCTTCG...AACTGCATCCAGCTGGCAGCCTGCGAGGCCACCGAGCTGCTGCCCATGATCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR-3UTR CCA 90 bp TTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGACCGCGGGGGTGCACCTaGATGCTGGTGCTCAGTGGG +
Preference number: 2 (lower is better)
Translates to: FSAQTWGWDSCRNLLLVGPRGCT*MLVLSG
Trigger: CCCACTGAGCACCAGCATCCAGGTGCACCCCCGCGG...TCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CCA 90 bp AACAGCACCTGCAGGACGATGGGCAGCTGTTCGGGTGGGTTTCGGTTCTCCACGTGGCGTGCATGTACGTaGGCGGCAGACGCGGGCTGC +
Preference number: 2 (lower is better)
Translates to: NSTCRTMGSCSGGFRFSTWRACT*AADAGC
Trigger: GCAGCCCGCGTCTGCCGCCCACGTACATGCACGCCA...CGTGGAGAACCGAAACCCACCCGAACAGCTGCCCATCGTCCTGCAGGTGCTGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR-3UTR TCA 90 bp GTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGGAGCGGGGGCGCTGCAGCTAATGCTCTaGTTACATGGAAATAAAGTG +
Preference number: 2 (lower is better)
Translates to: VQAARGAHGGGLQGGAGALQLML*LHGNKV
Trigger: CACTTTATTTCCATGTAATCAGAGCATTAGCTGCAG...CGCCCCCGCTCCACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR TCA 90 bp GACCCGGGCTGCTTTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTCTCTCACCGCCAGAATaGAGCCACCTGGCTCCTTCA +
Preference number: 2 (lower is better)
Translates to: DPGCFLGPDVGMGFVPEPLSPPE*SHLAPS
Trigger: TGAAGGAGCCAGGTGGCTTCATTCTGGCGGTGAGAG...AGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAAAGCAGCCCGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR TCA 90 bp GGCTGGAGAAAGGGCAGGCTGGAAACGCAGGGCTCGGCATCCCCAGAAGGGCCGGCGTGTAGTTCTTGTTaGAGACCCAGACCTCCCCGT +
Preference number: 2 (lower is better)
Translates to: GWRKGRLETQGSASPEGPACSSC*RPRPPR
Trigger: ACGGGGAGGTCTGGGTCTTCAACAAGAACTACACGC...CGGCCCTTCTGGGGATGCCGAGCCCTGCGTTTCCAGCCTGCCCTTTCTCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR-3UTR GCA 90 bp ACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCGCCTAGCCAACGTTCACACTaGGGGGCCGCAGCAGCCGAC +
Preference number: 2 (lower is better)
Translates to: TFFWWELAFQKGAAEGPPSQRSH*GAAAAD
Trigger: GTCGGCTGCTGCGGCCCCGCAGTGTGAACGTTGGCT...AGGCGGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR GCA 90 bp GAGCAGCCCTTCGGAGGGAAAGGAGCCCCGTGGATTAAGGCAGGGGCTACCTCGGTAGCAGGGCCCTCCTaGCGTCATCAGCAGCTAAGG +
Preference number: 2 (lower is better)
Translates to: EQPFGGKGAPWIKAGATSVAGPS*RHQQLR
Trigger: CCTTAGCTGCTGATGACGGCAGGAGGGCCCTGCTAC...CGAGGTAGCCCCTGCCTTAATCCACGGGGCTCCTTTCCCTCCGAAGGGCTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CCA 90 bp TGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGGGGAGAGGTGGTGGGCCTaGCTGGGGCAGCGCCTCTCG +
Preference number: 2 (lower is better)
Translates to: WLCSVCKTAHTRPAAPPGERWWA*LGQRLS
Trigger: CGAGAGGCGCTGCCCCAGCCAGGCCCACCACCTCTC...CCCAGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CCA 90 bp ACGCTGTCCACTGCGAGGATCTTGGCCCAGATGAAAACGAGAAGTGGCCGCAGCTGGGCAGCAGCTCGGTaGCCTCGCAGGCTGCCAGCT +
Preference number: 2 (lower is better)
Translates to: TLSTARILAQMKTRSGRSWAAAR*PRRLPA
Trigger: AGCTGGCAGCCTGCGAGGCCACCGAGCTGCTGCCCA...GCTGCGGCCACTTCTCGTTTTCATCTGGGCCAAGATCCTCGCAGTGGACAGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR-3UTR CCA 90 bp GCAGGTTCACATCACTCTGGGGAGGAGGGCGGGGATACTCACGCTGTCCACTGCCCCAGGCTTGCCACATaGCGTGCATGTACGTGGGCG +
Preference number: 2 (lower is better)
Translates to: AGSHHSGEEGGDTHAVHCPRLAT*RACTWA
Trigger: CGCCCACGTACATGCACGCCATGTGGCAAGCCTGGG...GCAGTGGACAGCGTGAGTATCCCCGCCCTCCTCCCCAGAGTGATGTGAACCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR CAA 90 bp TCCCGAATTTCCAGTGTCCCCCAGCTGGCTAGGAAATGTCCCTGCTaGCGTGCACTGACTGTGAGAGGTGGTGGGCCTGGCTGGGGCAGC +
Preference number: 2 (lower is better)
Translates to: SRISSVPQLARKCPC*RALTVRGGGPGWGS
Trigger: GCTGCCCCAGCCAGGCCCACCACCTCTCACAGTCAGTGCACGCAAGCAGGGACATTTCCTAGCCAGCTGGGGGACACTGGAAATTCGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR TCA 90 bp GCGAGGCTGGAGAAAGGGCAGGCTGGAAACGCAGGGCTCGGCATCCCCAGAAGGGGATCTTGGCCCAGATaGAAACGAGAAGTGGCCGCA +
Preference number: 2 (lower is better)
Translates to: ARLEKGQAGNAGLGIPRRGSWPR*KREVAA
Trigger: TGCGGCCACTTCTCGTTTTCATCTGGGCCAAGATCC...CCTTCTGGGGATGCCGAGCCCTGCGTTTCCAGCCTGCCCTTTCTCCAGCCTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR-3UTR GCA 90 bp TGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAACCGTGGCCGCGGGGGTaGACCTGGATGCTGGTGCTC +
Preference number: 2 (lower is better)
Translates to: WGWDSCRNLLLVGARIPKPWPRG*TWMLVL
Trigger: GAGCACCAGCATCCAGGTGCACCCCCGCGGCCACGG...TTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR GCA 90 bp TGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAGACCACAGGTCGGGCTaGTGTCCCCGCGCCTGTGGG +
Preference number: 2 (lower is better)
Translates to: WGWDSCRNLLLVGARIPKDHRSG*CPRACG
Trigger: CCCACAGGCGCGGGGACAGCAGCCCGACCTGTGGTC...TTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR GCA 90 bp GCGAGGCTGGAGAAAGGGCAGGCTGGAAACGCAGGGCTCGGCATCCCCAGAAGGTGGCTTAACAGCACCTaGAGGACGATGGGCAGCTGT +
Preference number: 2 (lower is better)
Translates to: ARLEKGQAGNAGLGIPRRWLNST*RTMGSC
Trigger: ACAGCTGCCCATCGTCCTGCAGGTGCTGTTAAGCCA...CCTTCTGGGGATGCCGAGCCCTGCGTTTCCAGCCTGCCCTTTCTCCAGCCTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR-3UTR CCA 90 bp GAGCAGCCCTTCGGAGGGAAAGGAGCCCCGTGGATTAAGGCAGGGGCTACCTCGGAGAGGGGCCAAAACTaGAGTCCAGAGACCTGGAGG +
Preference number: 2 (lower is better)
Translates to: EQPFGGKGAPWIKAGATSERGQN*SPETWR
Trigger: CCTCCAGGTCTCTGGACTCCAGTTTTGGCCCCTCTC...CGAGGTAGCCCCTGCCTTAATCCACGGGGCTCCTTTCCCTCCGAAGGGCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CCA 90 bp CCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCAGGGAAAGGAGCCCCGTaGATTAAGGCAGGGGCTACC +
Preference number: 2 (lower is better)
Translates to: PRRGDGIRAGTFFWWELAGKGAP*IKAGAT
Trigger: GGTAGCCCCTGCCTTAATCCACGGGGCTCCTTTCCC...TGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CCA 90 bp CAAAAAGGAGCAGCGGAGGGGCCGCCTCTGTCCTGCCTTGTCACGTCCCGGCCATATGTGAGGAACGTGTaGGGACAGAGCAGGGAGACC +
Preference number: 2 (lower is better)
Translates to: QKGAAEGPPLSCLVTSRPYVRNV*GQSRET
Trigger: GGTCTCCCTGCTCTGTCCCCACACGTTCCTCACATA...TGGCCGGGACGTGACAAGGCAGGACAGAGGCGGCCCCTCCGCTGCTCCTTTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CCA 90 bp TTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGGGCGGTGGGCGGCTCAAGGCTaGAGACGGGGCTGGTGTCAC +
Preference number: 2 (lower is better)
Translates to: LCSVCKTAHTRPAAPPGRWAAQG*RRGWCH
Trigger: GTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCA...CCGCCCAGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR TCA 90 bp AGGGCTCGGCATCCCCAGAAGGGCCGGCAGGTTCACATCACTCTGGGGAGGAGGCGCCAGGCACCAGACTaGCACATTTCTGCATGCAAA +
Preference number: 2 (lower is better)
Translates to: RARHPQKGRQVHITLGRRRQAPD*HISACK
Trigger: TTTGCATGCAGAAATGTGTCAGTCTGGTGCCTGGCG...CCTCCTCCCCAGAGTGATGTGAACCTGCCGGCCCTTCTGGGGATGCCGAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR-3UTR CCA 90 bp ACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCGCCTGGTGCACCTGGATGCTaGTGCTCAGTGGGAAGCCAC +
Preference number: 2 (lower is better)
Translates to: TFFWWELAFQKGAAEGPPGAPGC*CSVGSH
Trigger: GTGGCTTCCCACTGAGCACCAGCATCCAGGTGCACC...AGGCGGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CCA 90 bp ACGGCAGGCCACCAGCCACACCGCAGGAGAGCCGGGCCTCGCCACACCAGCTCTCTTCTTCCTCTCTCTTaGTTTCCCGAATTTCCAGTG +
Preference number: 2 (lower is better)
Translates to: TAGHQPHRRRAGPRHTSSLLPLS*FPEFPV
Trigger: CACTGGAAATTCGGGAAACCAAGAGAGAGGAAGAAG...AGAGCTGGTGTGGCGAGGCCCGGCTCTCCTGCGGTGTGGCTGGTGGCCTGCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CCA 90 bp ACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCGCCTTCACTCCCGTGGTCGTaGGCCTCTCACCGCCAGAAT +
Preference number: 2 (lower is better)
Translates to: TFFWWELAFQKGAAEGPPSLPWS*ASHRQN
Trigger: ATTCTGGCGGTGAGAGGCCCACGACCACGGGAGTGA...AGGCGGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CCA 90 bp AGCAGCTCGGTGGCCTCGCAGGCTGCCAGCTGGATGCAGTTTTTCATCGACGGAGGACTCGCTCCTCCTTaGCGTTGCGACGTAAGGACG +
Preference number: 2 (lower is better)
Translates to: SSSVASQAASWMQFFIDGGLAPP*RCDVRT
Trigger: CGTCCTTACGTCGCAACGCCAAGGAGGAGCGAGTCC...TCCGTCGATGAAAAACTGCATCCAGCTGGCAGCCTGCGAGGCCACCGAGCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR-3UTR CCA 90 bp GGTTCACATCACTCTGGGGAGGAGGGCGGGGATACTCACGCTGTCCACTGCGAGGATGAAAACGAGAAGTaGCCGCAGCTCTCGGGCCGA +
Preference number: 2 (lower is better)
Translates to: GSHHSGEEGGDTHAVHCEDENEK*PQLSGR
Trigger: TCGGCCCGAGAGCTGCGGCCACTTCTCGTTTTCATC...CTCGCAGTGGACAGCGTGAGTATCCCCGCCCTCCTCCCCAGAGTGATGTGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR-3UTR TCA 90 bp CGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCGTCTCTGGCCAAATGTaGCCAGGCAGGGTTCCATCC +
Preference number: 2 (lower is better)
Translates to: RNLLLVGARIPKRSSGGAVSGQM*PGRVPS
Trigger: GGATGGAACCCTGCCTGGTCACATTTGGCCAGAGAC...GGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CCA 90 bp TTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGACCAGTGTCCCCCAGCTaGCTAGGAAATGTCCCTGCT +
Preference number: 2 (lower is better)
Translates to: FSAQTWGWDSCRNLLLVGPVSPS*LGNVPA
Trigger: AGCAGGGACATTTCCTAGCCAGCTGGGGGACACTGG...TCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CCA 90 bp ACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCGCCTTTCACACCCGCCAGTTaGAGGGGCGTCTCCTTCTTC +
Preference number: 2 (lower is better)
Translates to: TFFWWELAFQKGAAEGPPFTPAS*RGVSFF
Trigger: GAAGAAGGAGACGCCCCTCCAACTGGCGGGTGTGAA...AGGCGGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CCA 90 bp ACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCGCCTGAGAGGGGCCAAAACTaGAGTCCAGAGACCTGGAGG +
Preference number: 2 (lower is better)
Translates to: TFFWWELAFQKGAAEGPPERGQN*SPETWR
Trigger: CCTCCAGGTCTCTGGACTCCAGTTTTGGCCCCTCTC...AGGCGGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CCA 90 bp GGCTGGAGAAAGGGCAGGCTGGAAACGCAGGGCTCGGCATCCCCAGAAGGGCCGTCTGCAGGTCATATATaGACAGAGGGATGTACTGCG +
Preference number: 2 (lower is better)
Translates to: GWRKGRLETQGSASPEGPSAGHI*TEGCTA
Trigger: CGCAGTACATCCCTCTGTCCATATATGACCTGCAGA...CGGCCCTTCTGGGGATGCCGAGCCCTGCGTTTCCAGCCTGCCCTTTCTCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR-3UTR TCA 90 bp TGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGGGAGCCCTCCCCTTCCCTaGCATTCCAGACACGACAGC +
Preference number: 2 (lower is better)
Translates to: WLCSVCKTAHTRPAAPPGSPPLP*HSRHDS
Trigger: GCTGTCGTGTCTGGAATGTCAGGGAAGGGGAGGGCT...CCCAGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR TCA 90 bp ACGGCAGGCCACCAGCCACACCGCAGGAGAGCCGGGCCTCGCCACACCAGCTCTCTGCAGCTAATGCTCTaGTTACATGGAAATAAAGTG +
Preference number: 2 (lower is better)
Translates to: TAGHQPHRRRAGPRHTSSLQLML*LHGNKV
Trigger: CACTTTATTTCCATGTAATCAGAGCATTAGCTGCAG...AGAGCTGGTGTGGCGAGGCCCGGCTCTCCTGCGGTGTGGCTGGTGGCCTGCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR TCA 90 bp ATTGTGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCCACAGCGGCCCCTGCTaGCAGCTCTGTGTGAGAGGG +
Preference number: 2 (lower is better)
Translates to: IVVVFCLQNCSYTPCGPSHSGPC*QLCVRG
Trigger: CCCTCTCACACAGAGCTGTCAGCAGGGGCCGCTGTG...GGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCACAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR TCA 90 bp GGCGAAGAACGGGCTGTGCCGAAACGCAGTGCCTTCCTCGATGATCGTCGGCAGGAGGGTGATTTGGGTTaGTTGCAGCTACCTCCAGCT +
Preference number: 2 (lower is better)
Translates to: GEERAVPKRSAFLDDRRQEGDLG*LQLPPA
Trigger: AGCTGGAGGTAGCTGCAATCAACCCAAATCACCCTC...CTGCCGACGATCATCGAGGAAGGCACTGCGTTTCGGCACAGCCCGTTCTTCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR-3UTR GCA 90 bp GGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGGCTGTGCGCTTCCTaGTCAGTGATGCTGCCAGCG +
Preference number: 2 (lower is better)
Translates to: GDGIRAGTFFWWELAFQKGLCAS*SVMLPA
Trigger: CGCTGGCAGCATCACTGAGCAGGAAGCGCACAGCCC...TTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR GCA 90 bp TTCACCCAGGGGCGTCCTCCTGTCGTTCAGGCGGCCAGGGATCTTTTCTATCAAGCTACCTCCAGCTCCTaGTCCCGCTGTAGTGCGAAC +
Preference number: 2 (lower is better)
Translates to: FTQGRPPVVQAARDLFYQATSSS*SRCSAN
Trigger: GTTCGCACTACAGCGGGAGCAGGAGCTGGAGGTAGC...TTGATAGAAAAGATCCCTGGCCGCCTGAACGACAGGAGGACGCCCCTGGGTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR-3UTR GCA 90 bp GGTTCACATCACTCTGGGGAGGAGGGCGGGGATACTCACGCTGTCCACTGCGAGAGGCTGCCAGCTGGATaGAGTTTTTCATCGACGGAG +
Preference number: 2 (lower is better)
Translates to: GSHHSGEEGGDTHAVHCERLPAG*SFSSTE
Trigger: CTCCGTCGATGAAAAACTGCATCCAGCTGGCAGCCT...CTCGCAGTGGACAGCGTGAGTATCCCCGCCCTCCTCCCCAGAGTGATGTGAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR-3UTR TCA 90 bp TTGTGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTCCGTGCCCCGGCGAGTaGCAGCTTCACTATGTACAG +
Preference number: 2 (lower is better)
Translates to: LWLCSVCKTAHTRPAAPPPCPGE*QLHYVQ
Trigger: CTGTACATAGTGAAGCTGTCACTCGCCGGGGCACGG...AGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR GCA 90 bp TGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAACCCGGCAGTGCCTCTTaGCTGTATGTGAGGAACGTG +
Preference number: 2 (lower is better)
Translates to: WGWDSCRNLLLVGARIPKPGSAS*LYVRNV
Trigger: CACGTTCCTCACATACAGGCAAGAGGCACTGCCGGG...TTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR GCA 90 bp AACAGCACCTGCAGGACGATGGGCAGCTGTTCGGGTGGGTTTCGGTTCTCCACGCGCTGTAGTGCGAACTaGTTGAAGGACTTGACGATC +
Preference number: 2 (lower is better)
Translates to: NSTCRTMGSCSGGFRFSTRCSAN*LKDLTI
Trigger: GATCGTCAAGTCCTTCAAGCAGTTCGCACTACAGCG...CGTGGAGAACCGAAACCCACCCGAACAGCTGCCCATCGTCCTGCAGGTGCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR-3UTR TCA 90 bp ATTGTGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCGCTGACAGCTCTGTGTaGGAGGGGCCAAAACTGGAG +
Preference number: 2 (lower is better)
Translates to: IVVVFCLQNCSYTPCGPSADSSV*EGPKLE
Trigger: CTCCAGTTTTGGCCCCTCTCACACAGAGCTGTCAGC...GGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCACAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR TCA 90 bp AGGAGGGCGGGGATACTCACGCTGTCCACTGCGAGGATCTTGGCCCAGATGAAAATGATCGTCGGCAGCTaGGACAGACAGATGTCAACA +
Preference number: 2 (lower is better)
Translates to: RRAGILTLSTARILAQMKMIVGS*DRQMST
Trigger: TGTTGACATCTGTCTGTCTCAGCTGCCGACGATCAT...TTTCATCTGGGCCAAGATCCTCGCAGTGGACAGCGTGAGTATCCCCGCCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR-3UTR CCA 90 bp GGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAATATGTGAGGAACGTGTaGGGACAGAGCAGGGAGACC +
Preference number: 2 (lower is better)
Translates to: GDGIRAGTFFWWELAFQKYVRNV*GQSRET
Trigger: GGTCTCCCTGCTCTGTCCCCACACGTTCCTCACATA...TTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CCA 90 bp GGGATACTCACGCTGTCCACTGCGAGGATCTTGGCCCAGATGAAAACGAGAAGTATGGTGAGCCACACCTaGAATGCGGTCAGCTGCTCG +
Preference number: 2 (lower is better)
Translates to: GILTLSTARILAQMKTRSMVSHT*NAVSCS
Trigger: CGAGCAGCTGACCGCATTCCAGGTGTGGCTCACCAT...ACTTCTCGTTTTCATCTGGGCCAAGATCCTCGCAGTGGACAGCGTGAGTATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR-3UTR TCA 90 bp ATTGTGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCCCTCTTGCCTGTATGTaGGGAACGTGTGGGGACAGA +
Preference number: 2 (lower is better)
Translates to: IVVVFCLQNCSYTPCGPSPLACM*GTCGDR
Trigger: TCTGTCCCCACACGTTCCTCACATACAGGCAAGAGG...GGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR GCA 90 bp CTCAAAACAAACAGAAACGCGTGTTGGGTAAGAATTGAGTTGAAGGACTGGATGCCGTGGCCGCGGGGGTaGACCTGGATGCTGGTGCTC +
Preference number: 2 (lower is better)
Translates to: LKTNRNACWVRIELKDWMPWPRG*TWMLVL
Trigger: GAGCACCAGCATCCAGGTGCACCCCCGCGGCCACGG...CATCCAGTCCTTCAACTCAATTCTTACCCAACACGCGTTTCTGTTTGTTTTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR GCA 90 bp TGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAGCTAGGAAATGTCCCTaGTTGCGTGCACTGACTGTG +
Preference number: 2 (lower is better)
Translates to: WGWDSCRNLLLVGARIPKARKCP*LRALTV
Trigger: CACAGTCAGTGCACGCAAGCAGGGACATTTCCTAGC...TTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR GCA 90 bp GGGGAGCACGTTCCACGCGATGGTGTCTGTGATGGCTGTGAAGATCCAGTTCAGGTGATTTGGGTTGATTaGAGCTACCTCCAGCTCCTG +
Preference number: 2 (lower is better)
Translates to: GEHVPRDGVCDGCEDPVQVIWVD*SYLQLL
Trigger: CAGGAGCTGGAGGTAGCTGCAATCAACCCAAATCAC...CTGAACTGGATCTTCACAGCCATCACAGACACCATCGCGTGGAACGTGCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR-3UTR GCA 90 bp AGGAGGGCGGGGATACTCACGCTGTCCACTGCGAGGATCTTGGCCCAGATGAAAAGACTGACACATTTCTaGATGCAAAACCAGCGCAGG +
Preference number: 2 (lower is better)
Translates to: RRAGILTLSTARILAQMKRLTHF*MQNQRR
Trigger: CCTGCGCTGGTTTTGCATGCAGAAATGTGTCAGTCT...TTTCATCTGGGCCAAGATCCTCGCAGTGGACAGCGTGAGTATCCCCGCCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR-3UTR CCA 90 bp TGTTGGTCACTCTCTGCTCTTAGCTTCACATTACCATTTCGTGTTTTGTCAAAGGGCACGCGGTGCCCATaGGGGTGGGCTCCAGGGTGG +
Preference number: 2 (lower is better)
Translates to: CWSLSALSFTLPFRVLSKGTRCP*GWAPGW
Trigger: CCACCCTGGAGCCCACCCCCATGGGCACCGCGTGCC...CTTTGACAAAACACGAAATGGTAATGTGAAGCTAAGAGCAGAGAGTGACCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CCA 90 bp GCCTTCCTCGATGATCGTCGGCAGCTGAGACAGACAGATGTCAACAGCCAGGTCAGCAAGAGGGTGATTTaGGTTGATTGCAGCTACCTC +
Preference number: 2 (lower is better)
Translates to: AFLDDRRQLRQTDVNSQVSKRVI*VDCSYL
Trigger: GAGGTAGCTGCAATCAACCCAAATCACCCTCTTGCT...GACCTGGCTGTTGACATCTGTCTGTCTCAGCTGCCGACGATCATCGAGGAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR-3UTR TCA 90 bp TGGAGATCTCTGGGAGCCCTGCATTTAGCTTCACTTGTTAATGCTACACGGGGTCTCCGTGCAATTCCATaGCATCACAGTGCCACGGAG +
Preference number: 2 (lower is better)
Translates to: WRSLGALHLASLVNATRGLRAIP*HHSATE
Trigger: CTCCGTGGCACTGTGATGTCATGGAATTGCACGGAG...ACCCCGTGTAGCATTAACAAGTGAAGCTAAATGCAGGGCTCCCAGAGATCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
3UTR-3UTR GCA 90 bp CTCAAAACAAACAGAAACGCGTGTTGGGTAAGAATTGAGTTGAAGGACTGGATGGGAGACCACGCCGCCTaGATGTGTGTGCCCCCAGGT +
Preference number: 2 (lower is better)
Translates to: LKTNRNACWVRIELKDWMGDHAA*MCVPPG
Trigger: ACCTGGGGGCACACACATGCAGGCGGCGTGGTCTCC...CATCCAGTCCTTCAACTCAATTCTTACCCAACACGCGTTTCTGTTTGTTTTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR GCA 90 bp CCACGTCTGCAGGTCATATATGGACAGAGGGATGTACTGCGTGTAGTTCTTGTTGCTCCTCCTTGGCGTTaGGACGTAAGGACGTGCAGA +
Preference number: 2 (lower is better)
Translates to: PRLQVIYGQRDVLRVVLVAPPWR*DVRTCR
Trigger: TCTGCACGTCCTTACGTCGCAACGCCAAGGAGGAGC...AACAAGAACTACACGCAGTACATCCCTCTGTCCATATATGACCTGCAGACGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR-3UTR CCA 90 bp TGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAACAGAATGAAGCCACCTaGCTCCTTCACCTCTCAATA +
Preference number: 2 (lower is better)
Translates to: WGWDSCRNLLLVGARIPKQNEAT*LLHLSI
Trigger: TATTGAGAGGTGAAGGAGCCAGGTGGCTTCATTCTG...TTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CCA 90 bp GGGATACTCACGCTGTCCACTGCGAGGATCTTGGCCCAGATGAAAACGAGAAGTCGATCAAGCCAGCATTaGAGCAGTCGTAGACGAAGA +
Preference number: 2 (lower is better)
Translates to: GILTLSTARILAQMKTRSRSSQH*SSRRRR
Trigger: TCTTCGTCTACGACTGCTCCAATGCTGGCTTGATCG...ACTTCTCGTTTTCATCTGGGCCAAGATCCTCGCAGTGGACAGCGTGAGTATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR-3UTR GCA 90 bp TGTTGGTCACTCTCTGCTCTTAGCTTCACATTACCATTTCGTGTTTTGTCAAAGCTTCCGGACCCGGGCTaGTTTCTCGGCCCAGACGTG +
Preference number: 2 (lower is better)
Translates to: CWSLSALSFTLPFRVLSKLPDPG*FLGPDV
Trigger: CACGTCTGGGCCGAGAAAGCAGCCCGGGTCCGGAAG...CTTTGACAAAACACGAAATGGTAATGTGAAGCTAAGAGCAGAGAGTGACCAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR GCA 90 bp TTCTCACTACTGGTTTCTAAAAGGTTAGAAACTCTCTTGCAAAGTGCTACCCTCGGTGTGGGGCCTCCCTaGCCAGCTCCGTGCAATTCC +
Preference number: 2 (lower is better)
Translates to: FSLLVSKRLETLLQSATLGVGPP*PAPCNS
Trigger: GGAATTGCACGGAGCTGGGCAGGGAGGCCCCACACC...GAGGGTAGCACTTTGCAAGAGAGTTTCTAACCTTTTAGAAACCAGTAGTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570891.5
3UTR CAA 90 bp TTTTGTCTCAAAACAAACAGAAACGCGTGTTGGGTAAGAATTGAGTaGAAGGACTGGATGGGAAGCTGCGTGTGCGGGTGGAGCTGGGCT +
Preference number: 2 (lower is better)
Translates to: FCLKTNRNACWVRIE*KDWMGSCVCGWSWA
Trigger: AGCCCAGCTCCACCCGCACACGCAGCTTCCCATCCAGTCCTTCAACTCAATTCTTACCCAACACGCGTTTCTGTTTGTTTTGAGACAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR GCA 90 bp CCAGGGATCTTTTCTATCAAATCCAGTGTGACGCCAGGCACCAGACTGACACATCTGCCCATCCACGTCTaGAGGTCATATATGGACAGA +
Preference number: 2 (lower is better)
Translates to: PGIFSIKSSVTPGTRLTHLPIHV*RSYMDR
Trigger: TCTGTCCATATATGACCTGCAGACGTGGATGGGCAG...ATGTGTCAGTCTGGTGCCTGGCGTCACACTGGATTTGATAGAAAAGATCCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR-3UTR CCA 90 bp TGTTGGTCACTCTCTGCTCTTAGCTTCACATTACCATTTCGTGTTTTGTCAAAGCCTCTCGCTCGCTCTTaGCCTGATGGGGACAGCTGC +
Preference number: 2 (lower is better)
Translates to: CWSLSALSFTLPFRVLSKPLARS*PDGDSC
Trigger: GCAGCTGTCCCCATCAGGCCAAGAGCGAGCGAGAGG...CTTTGACAAAACACGAAATGGTAATGTGAAGCTAAGAGCAGAGAGTGACCAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR TCA 90 bp CTCAAAACAAACAGAAACGCGTGTTGGGTAAGAATTGAGTTGAAGGACTGGATGTGTGCTACACCTGTGTaGGGGCACAGGCATGGAGAC +
Preference number: 2 (lower is better)
Translates to: LKTNRNACWVRIELKDWMCATPV*GHRHGD
Trigger: GTCTCCATGCCTGTGCCCTCACACAGGTGTAGCACA...CATCCAGTCCTTCAACTCAATTCTTACCCAACACGCGTTTCTGTTTGTTTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CCA 90 bp TGTTGGTCACTCTCTGCTCTTAGCTTCACATTACCATTTCGTGTTTTGTCAAAGGATGCTGGTGCTCAGTaGGAAGCCACCGTCAACCCG +
Preference number: 2 (lower is better)
Translates to: CWSLSALSFTLPFRVLSKDAGAQ*EATVNP
Trigger: CGGGTTGACGGTGGCTTCCCACTGAGCACCAGCATC...CTTTGACAAAACACGAAATGGTAATGTGAAGCTAAGAGCAGAGAGTGACCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CCA 90 bp TGTTGGTCACTCTCTGCTCTTAGCTTCACATTACCATTTCGTGTTTTGTCAAAGGAGGTCGCATCAGCATaGGCGGCTCAAGGCTGGAGA +
Preference number: 2 (lower is better)
Translates to: CWSLSALSFTLPFRVLSKEVASA*AAQGWR
Trigger: TCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCTC...CTTTGACAAAACACGAAATGGTAATGTGAAGCTAAGAGCAGAGAGTGACCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR TCA 90 bp TGTTGGTCACTCTCTGCTCTTAGCTTCACATTACCATTTCGTGTTTTGTCAAAGCTCTCACCGCCAGAATaGAGCCACCTGGCTCCTTCA +
Preference number: 2 (lower is better)
Translates to: CWSLSALSFTLPFRVLSKLSPPE*SHLAPS
Trigger: TGAAGGAGCCAGGTGGCTTCATTCTGGCGGTGAGAG...CTTTGACAAAACACGAAATGGTAATGTGAAGCTAAGAGCAGAGAGTGACCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR GCA 90 bp CTCAAAACAAACAGAAACGCGTGTTGGGTAAGAATTGAGTTGAAGGACTGGATGATGTCCCTGCTTGCGTaGACTGACTGTGAGAGGTGG +
Preference number: 2 (lower is better)
Translates to: LKTNRNACWVRIELKDWMMSLLA*TDCERW
Trigger: CCACCTCTCACAGTCAGTGCACGCAAGCAGGGACAT...CATCCAGTCCTTCAACTCAATTCTTACCCAACACGCGTTTCTGTTTGTTTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR GCA 90 bp TGTTGGTCACTCTCTGCTCTTAGCTTCACATTACCATTTCGTGTTTTGTCAAAGATCTGCACATGCGTGTaGTACACCTGTGTGAGGGCA +
Preference number: 2 (lower is better)
Translates to: CWSLSALSFTLPFRVLSKICTCV*YTCVRA
Trigger: TGCCCTCACACAGGTGTAGCACACGCATGTGCAGAT...CTTTGACAAAACACGAAATGGTAATGTGAAGCTAAGAGCAGAGAGTGACCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR CAA 90 bp CAAGTTATTTTCTCACTACTGGTTTCTAAAAGGTTAGAAACTCTCTaGCAAAGTGCTACCCTCCCGAGTTGCAGAGCTGTGAGGCTTCAG +
Preference number: 2 (lower is better)
Translates to: QVIFSLLVSKRLETL*QSATLPSCRAVRLQ
Trigger: CTGAAGCCTCACAGCTCTGCAACTCGGGAGGGTAGCACTTTGCAAGAGAGTTTCTAACCTTTTAGAAACCAGTAGTGAGAAAATAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570891.5
3UTR-3UTR TCA 90 bp CTCAAAACAAACAGAAACGCGTGTTGGGTAAGAATTGAGTTGAAGGACTGGATGTACATGGAAATAAAGTaGGGTGTTTCCCCTTTCAGC +
Preference number: 2 (lower is better)
Translates to: LKTNRNACWVRIELKDWMYMEIK*GVSPFS
Trigger: GCTGAAAGGGGAAACACCTCACTTTATTTCCATGTA...CATCCAGTCCTTCAACTCAATTCTTACCCAACACGCGTTTCTGTTTGTTTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CAA 90 bp GTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGGAGCGGGGGCGCGCCTCTGTCCTGCCTaGTCACGTCCCGGCCAGCCC +
Preference number: 3 (lower is better)
Translates to: VQAARGAHGGGLQGGAGARLCPA*SRPGQP
Trigger: GGGCTGGCCGGGACGTGACAAGGCAGGACAGAGGCG...CGCCCCCGCTCCACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCAC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR GCA 72 bp ACCTGTGAAGACAGCCCACGTGCAGGCGGCACGCGGTaGCCATGGGGGTGGGCTCCAGGGTGGAGCGGGGGC +
Preference number: 3 (lower is better)
Translates to: TCEDSPRAGGTR*PWGWAPGWSGG
Trigger: GCCCCCGCTCCACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCACGTGGGCTGTCTTCACAGGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR CCA 72 bp CAGAGGCGCCGTGGCCGCGGGGGTGCACCTGGATGCTaGTGCTCAGTGGGAAGCCACCGTCAACCCGAGCCC +
Preference number: 3 (lower is better)
Translates to: QRRRGRGGAPGC*CSVGSHRQPEP
Trigger: GGGCTCGGGTTGACGGTGGCTTCCCACTGAGCACCAGCATCCAGGTGCACCCCCGCGGCCACGGCGCCTCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR CCA 72 bp GCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTaGTGTCACCCGGAGCCGTCCGGGACCCGGCAGTGC +
Preference number: 3 (lower is better)
Translates to: ASAWAAQGWRRG*CHPEPSGTRQC
Trigger: GCACTGCCGGGTCCCGGACGGCTCCGGGTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CAA 90 bp GTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGGAGCGGGGGCGACCCGGCAGTGCCTCTaGCCTGTATGTGAGGAACGT +
Preference number: 3 (lower is better)
Translates to: VQAARGAHGGGLQGGAGATRQCL*PVCEER
Trigger: ACGTTCCTCACATACAGGCAAGAGGCACTGCCGGGT...CGCCCCCGCTCCACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR GCA 72 bp GGACAGAGGCGCCGTGGCCGCGGGGGTGCACCTGGATaGTGGTGCTCAGTGGGAAGCCACCGTCAACCCGAG +
Preference number: 3 (lower is better)
Translates to: GQRRRGRGGAPG*WCSVGSHRQPE
Trigger: CTCGGGTTGACGGTGGCTTCCCACTGAGCACCAGCATCCAGGTGCACCCCCGCGGCCACGGCGCCTCTGTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR CCA 72 bp GTGGCCGCGGGGGTGCACCTGGATGCTGGTGCTCAGTaGGAAGCCACCGTCAACCCGAGCCCTCCCCTTCCC +
Preference number: 3 (lower is better)
Translates to: VAAGVHLDAGAQ*EATVNPSPPLP
Trigger: GGGAAGGGGAGGGCTCGGGTTGACGGTGGCTTCCCACTGAGCACCAGCATCCAGGTGCACCCCCGCGGCCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR CCA 72 bp TCAGCCGAGGTCGCATCAGCATGGGCGGCTCAAGGCTaGAGACGGGGCTGGTGTCACCCGGAGCCGTCCGGG +
Preference number: 3 (lower is better)
Translates to: SAEVASAWAAQG*RRGWCHPEPSG
Trigger: CCCGGACGGCTCCGGGTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCTCGGCTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CAA 90 bp GTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGGAGCGGGGGCGGGAGCCACCTGCCTTTaGACAGGTGGTGATTTTGTC +
Preference number: 3 (lower is better)
Translates to: VQAARGAHGGGLQGGAGAGATCL*TGGDFV
Trigger: GACAAAATCACCACCTGTCAAAAGGCAGGTGGCTCC...CGCCCCCGCTCCACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR CCA 72 bp AGAGGGACAGAGGCGCCGTGGCCGCGGGGGTGCACCTaGATGCTGGTGCTCAGTGGGAAGCCACCGTCAACC +
Preference number: 3 (lower is better)
Translates to: RGTEAPWPRGCT*MLVLSGKPPST
Trigger: GGTTGACGGTGGCTTCCCACTGAGCACCAGCATCCAGGTGCACCCCCGCGGCCACGGCGCCTCTGTCCCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR CCA 72 bp TGGAGACCACAGGTCGGGCTGCTGTCCCCGCGCCTGTaGGGAAGAGCAGCCCTTCGGAGGGAAAGGAGCCCC +
Preference number: 3 (lower is better)
Translates to: WRPQVGLLSPRL*GRAALRRERSP
Trigger: GGGGCTCCTTTCCCTCCGAAGGGCTGCTCTTCCCCACAGGCGCGGGGACAGCAGCCCGACCTGTGGTCTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR TCA 72 bp GTGTGGGGCCTCCCTGCCCAGCTCCGTGCAATTCCATaGCATCACAGTGCCACGGAGGGCGGGGGAGCACGG +
Preference number: 3 (lower is better)
Translates to: VWGLPAQLRAIP*HHSATEGGGAR
Trigger: CCGTGCTCCCCCGCCCTCCGTGGCACTGTGATGTCATGGAATTGCACGGAGCTGGGCAGGGAGGCCCCACAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570891.5
3UTR GCA 72 bp GGGAGACCACGCCGCCTGCATGTGTGTGCCCCCAGGTaGCGGCCGTGGTGCCATCTGCACATGCGTGTGCTA +
Preference number: 3 (lower is better)
Translates to: GRPRRLHVCAPR*RPWCHLHMRVL
Trigger: TAGCACACGCATGTGCAGATGGCACCACGGCCGGCACCTGGGGGCACACACATGCAGGCGGCGTGGTCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR GCA 72 bp GTCACCCGGAGCCGTCCGGGACCCGGCAGTGCCTCTTaGCTGTATGTGAGGAACGTGTGGGGACAGAGCAGG +
Preference number: 3 (lower is better)
Translates to: VTRSRPGPGSAS*LYVRNVWGQSR
Trigger: CCTGCTCTGTCCCCACACGTTCCTCACATACAGGCAAGAGGCACTGCCGGGTCCCGGACGGCTCCGGGTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR GCA 72 bp GGCTGGTGTCACCCGGAGCCGTCCGGGACCCGGCAGTaGCTCTTGCCTGTATGTGAGGAACGTGTGGGGACA +
Preference number: 3 (lower is better)
Translates to: GWCHPEPSGTRQ*LLPVCEERVGT
Trigger: TGTCCCCACACGTTCCTCACATACAGGCAAGAGGCACTGCCGGGTCCCGGACGGCTCCGGGTGACACCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR GCA 72 bp CCCTGCCCAGCTCCGTGCAATTCCATGACATCACAGTaGCACGGAGGGCGGGGGAGCACGGCACCTGGAGGA +
Preference number: 3 (lower is better)
Translates to: PCPAPCNSMTSQ*HGGRGSTAPGG
Trigger: TCCTCCAGGTGCCGTGCTCCCCCGCCCTCCGTGGCACTGTGATGTCATGGAATTGCACGGAGCTGGGCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570891.5
3UTR-3UTR CAA 90 bp GCCGAGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACCTTCACACCCGCCAGTaGGAGGGGCGTCTCCTTCTT +
Preference number: 3 (lower is better)
Translates to: AEVASAWAAQGWRRGWCHLHTRQ*EGRLLL
Trigger: AAGAAGGAGACGCCCCTCCAACTGGCGGGTGTGAAG...GTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCTCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CAA 90 bp GCGAGGCTGGAGAAAGGGCAGGCTGGAAACGCAGGGCTCGGCATCCCCAGAAGGCGCTCCTCCTTGGCGTaGCGACGTAAGGACGTGCAG +
Preference number: 3 (lower is better)
Translates to: ARLEKGQAGNAGLGIPRRRSSLA*RRKDVQ
Trigger: CTGCACGTCCTTACGTCGCAACGCCAAGGAGGAGCG...CCTTCTGGGGATGCCGAGCCCTGCGTTTCCAGCCTGCCCTTTCTCCAGCCTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR CCA 72 bp CGGACCCGGGCTGCTTTCTCGGCCCAGACGTGGGGATaGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCT +
Preference number: 3 (lower is better)
Translates to: RTRAAFSAQTWG*DSCRNLLLVGA
Trigger: AGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAAAGCAGCCCGGGTCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR CCA 72 bp CAGCCGGGAGGTCGGGGATCATGGGCAGCAGCTCGGTaGCCTCGCAGGCTGCCAGCTGGATGCAGTTTTTCA +
Preference number: 3 (lower is better)
Translates to: QPGGRGSWAAAR*PRRLPAGCSFS
Trigger: TGAAAAACTGCATCCAGCTGGCAGCCTGCGAGGCCACCGAGCTGCTGCCCATGATCCCCGACCTCCCGGCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR-3UTR CAA 90 bp CCGGGGGAGCACGTTCCACGCGATGGTGTCTGTGATGGCTGTGAAGATCCAGTTACCCAGACCTCCCCGTaGACTGTGGGCCGGGGCACC +
Preference number: 3 (lower is better)
Translates to: PGEHVPRDGVCDGCEDPVTQTSP*TVGRGT
Trigger: GGTGCCCCGGCCCACAGTCAACGGGGAGGTCTGGGT...AACTGGATCTTCACAGCCATCACAGACACCATCGCGTGGAACGTGCTCCCCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR TCA 72 bp GCTGTTCGGGTGGGTTTCGGTTCTCCACGCCCATGGTaGGCCACACCTGGAATGCGGTCAGCTGCTCGGCGA +
Preference number: 3 (lower is better)
Translates to: AVRVGFGSPRPW*ATPGMRSAARR
Trigger: TCGCCGAGCAGCTGACCGCATTCCAGGTGTGGCTCACCATGGGCGTGGAGAACCGAAACCCACCCGAACAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR GCA 72 bp ATGTGTGTGCCCCCAGGTGCCGGCCGTGGTGCCATCTaGACATGCGTGTGCTACACCTGTGTGAGGGCACAG +
Preference number: 3 (lower is better)
Translates to: MCVPPGAGRGAI*TCVCYTCVRAQ
Trigger: CTGTGCCCTCACACAGGTGTAGCACACGCATGTGCAGATGGCACCACGGCCGGCACCTGGGGGCACACACAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR GCA 72 bp CCCAAGTTAGGTGTGGGGCCTCCCTGCCCAGCTCCGTaGAATTCCATGACATCACAGTGCCACGGAGGGCGG +
Preference number: 3 (lower is better)
Translates to: PKLGVGPPCPAP*NSMTSQCHGGR
Trigger: CCGCCCTCCGTGGCACTGTGATGTCATGGAATTGCACGGAGCTGGGCAGGGAGGCCCCACACCTAACTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
3UTR GCA 72 bp CCCGAGTTGCAGAGCTGTGAGGCTTCAGCCGGCCGCTaGTCCCGTGCAGTCCTAAAAGGCCCTCCAAGGCTT +
Preference number: 3 (lower is better)
Translates to: PELQSCEASAGR*SRAVLKGPPRL
Trigger: AAGCCTTGGAGGGCCTTTTAGGACTGCACGGGAGCAGCGGCCGGCTGAAGCCTCACAGCTCTGCAACTCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
3UTR GCA 72 bp ACGCCCATGGTGAGCCACACCTGGAATGCGGTCAGCTaGTCGGCGAAGAACGGGCTGTGCCGAAACGCAGTG +
Preference number: 3 (lower is better)
Translates to: TPMVSHTWNAVS*SAKNGLCRNAV
Trigger: CACTGCGTTTCGGCACAGCCCGTTCTTCGCCGAGCAGCTGACCGCATTCCAGGTGTGGCTCACCATGGGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR GCA 72 bp CCGAGCTCTGGAGCAGCTTCAGCACGTAGGGGAAGATaGCGACAGACAAGGCCAGGCTCACTGCCCAGGGAC +
Preference number: 3 (lower is better)
Translates to: PSSGAASARRGR*RQTRPGSLPRD
Trigger: GTCCCTGGGCAGTGAGCCTGGCCTTGTCTGTCGGCATCTTCCCCTACGTGCTGAAGCTGCTCCAGAGCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR CCA 72 bp ACCTTCCGGACCCGGGCTGCTTTCTCGGCCCAGACGTaGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTG +
Preference number: 3 (lower is better)
Translates to: TFRTRAAFSAQT*GWDSCRNLLLV
Trigger: CACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAAAGCAGCCCGGGTCCGGAAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR CCA 72 bp GGGTTTCGGTTCTCCACGCCCATGGTGAGCCACACCTaGAATGCGGTCAGCTGCTCGGCGAAGAACGGGCTG +
Preference number: 3 (lower is better)
Translates to: GFRFSTPMVSHT*NAVSCSAKNGL
Trigger: CAGCCCGTTCTTCGCCGAGCAGCTGACCGCATTCCAGGTGTGGCTCACCATGGGCGTGGAGAACCGAAACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR-3UTR CAA 90 bp GCCGGGCCTCGCCACACCAGCTCTCACTCCCGTGGTCGTGGGCCTCTCACCGCCCCTTCTTCCTCTCTCTaGGTTTCCCGAATTTCCAGT +
Preference number: 3 (lower is better)
Translates to: AGPRHTSSHSRGRGPLTAPSSSL*VSRISS
Trigger: ACTGGAAATTCGGGAAACCAAGAGAGAGGAAGAAGG...GGCGGTGAGAGGCCCACGACCACGGGAGTGAGAGCTGGTGTGGCGAGGCCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR TCA 72 bp TCTTGCAAAGTGCTACCCTCCCGAGTTGCAGAGCTGTaGGGCTTCAGCCGGCCGCTGCTCCCGTGCAGTCCT +
Preference number: 3 (lower is better)
Translates to: SCKVLPSRVAEL*GFSRPLLPCSP
Trigger: AGGACTGCACGGGAGCAGCGGCCGGCTGAAGCCTCACAGCTCTGCAACTCGGGAGGGTAGCACTTTGCAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570891.5
3UTR GCA 72 bp GGGGATCATGGGCAGCAGCTCGGTGGCCTCGCAGGCTaGCAGCTGGATGCAGTTTTTCATCGACGGAGGCAA +
Preference number: 3 (lower is better)
Translates to: GDHGQQLGGLAG*QLDAVFHRRRQ
Trigger: TTGCCTCCGTCGATGAAAAACTGCATCCAGCTGGCAGCCTGCGAGGCCACCGAGCTGCTGCCCATGATCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR-3UTR CAA 90 bp ACGGCAGGCCACCAGCCACACCGCAGGAGAGCCGGGCCTCGCCACACCAGCTCTGTGGTTGTGTTCTGTTaGCAAAACTGCTCATACACG +
Preference number: 3 (lower is better)
Translates to: TAGHQPHRRRAGPRHTSSVVVFC*QNCSYT
Trigger: CGTGTATGAGCAGTTTTGCAAACAGAACACAACCAC...AGAGCTGGTGTGGCGAGGCCCGGCTCTCCTGCGGTGTGGCTGGTGGCCTGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CAA 90 bp TCGGTTCTCCACGCCCATGGTGAGCCACACCTGGAATGCGGTCAGCTGCTCGGCCTGTCTGAAGAGCTTTaGGAAGAGATCCCGGGGGAG +
Preference number: 3 (lower is better)
Translates to: SVLHAHGEPHLECGQLLGLSEEL*EEIPGE
Trigger: CTCCCCCGGGATCTCTTCCAAAAGCTCTTCAGACAG...GCCGAGCAGCTGACCGCATTCCAGGTGTGGCTCACCATGGGCGTGGAGAACCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR GCA 72 bp AAATGTGACCAGGCAGGGTTCCATCCACCCAGAAGATaGTCTTGGCCACGGCAGGCCACCAGCCACACCGCA +
Preference number: 3 (lower is better)
Translates to: KCDQAGFHPPRR*SWPRQATSHTA
Trigger: TGCGGTGTGGCTGGTGGCCTGCCGTGGCCAAGAGCATCTTCTGGGTGGATGGAACCCTGCCTGGTCACATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR GCA 72 bp GCTGCTTTCTCGGCCCAGACGTGGGGATGGGATTCGTaGCGGAACCTTCTTCTGGTGGGAGCTCGCATTCCA +
Preference number: 3 (lower is better)
Translates to: AAFSAQTWGWDS*RNLLLVGARIP
Trigger: TGGAATGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAAAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR GCA 72 bp GCAGCAGCTCGGTGGCCTCGCAGGCTGCCAGCTGGATaGAGTTTTTCATCGACGGAGGCAAAGGCATCTGAG +
Preference number: 3 (lower is better)
Translates to: AAARWPRRLPAG*SFSSTEAKASE
Trigger: CTCAGATGCCTTTGCCTCCGTCGATGAAAAACTGCATCCAGCTGGCAGCCTGCGAGGCCACCGAGCTGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR CCA 72 bp CGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTaGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGG +
Preference number: 3 (lower is better)
Translates to: RGDGIRAGTFFW*ELAFQKGAAEG
Trigger: CCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR CCA 72 bp ATGGGCAGCAGCTCGGTGGCCTCGCAGGCTGCCAGCTaGATGCAGTTTTTCATCGACGGAGGCAAAGGCATC +
Preference number: 3 (lower is better)
Translates to: MGSSSVASQAAS*MQFFIDGGKGI
Trigger: GATGCCTTTGCCTCCGTCGATGAAAAACTGCATCCAGCTGGCAGCCTGCGAGGCCACCGAGCTGCTGCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR CCA 72 bp CACTGCGAGGATCTTGGCCCAGATGAAAACGAGAAGTaGCCGCAGCTCTCGGGCCGAGCTCTGGAGCAGCTT +
Preference number: 3 (lower is better)
Translates to: HCEDLGPDENEK*PQLSGRALEQL
Trigger: AAGCTGCTCCAGAGCTCGGCCCGAGAGCTGCGGCCACTTCTCGTTTTCATCTGGGCCAAGATCCTCGCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR-3UTR CAA 90 bp CCGTGGTCGTGGGCCTCTCACCGCCAGAATGAAGCCACCTGGCTCCTTCACCTCAGGAAATGTCCCTGCTaGCGTGCACTGACTGTGAGA +
Preference number: 3 (lower is better)
Translates to: PWSWASHRQNEATWLLHLRKCPC*RALTVR
Trigger: TCTCACAGTCAGTGCACGCAAGCAGGGACATTTCCT...GAGGTGAAGGAGCCAGGTGGCTTCATTCTGGCGGTGAGAGGCCCACGACCACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CAA 90 bp TTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGGGCGGCTTCACACCCGCCAGTaGGAGGGGCGTCTCCTTCTT +
Preference number: 3 (lower is better)
Translates to: LCSVCKTAHTRPAAPPGRLHTRQ*EGRLLL
Trigger: AAGAAGGAGACGCCCCTCCAACTGGCGGGTGTGAAG...CCGCCCAGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CAA 90 bp CGGGGGAGCACGTTCCACGCGATGGTGTCTGTGATGGCTGTGAAGATCCAGTTCAGGACTCGCTCCTCCTaGGCGTTGCGACGTAAGGAC +
Preference number: 3 (lower is better)
Translates to: RGSTFHAMVSVMAVKIQFRTRSS*ALRRKD
Trigger: GTCCTTACGTCGCAACGCCAAGGAGGAGCGAGTCCT...GAACTGGATCTTCACAGCCATCACAGACACCATCGCGTGGAACGTGCTCCCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR-3UTR CAA 90 bp TTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGGGCGGACCCGGCAGTGCCTCTaGCCTGTATGTGAGGAACGT +
Preference number: 3 (lower is better)
Translates to: LCSVCKTAHTRPAAPPGRTRQCL*PVCEER
Trigger: ACGTTCCTCACATACAGGCAAGAGGCACTGCCGGGT...CCGCCCAGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CAA 90 bp AGACAGCCCACGTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGTTCAAAATACCATCATaGTGGTTGTGTTCTGTTTGC +
Preference number: 3 (lower is better)
Translates to: RQPTCRRHAVPMGVGSRVFKIPS*WLCSVC
Trigger: GCAAACAGAACACAACCACAATGATGGTATTTTGAA...CACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCACGTGGGCTGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR TCA 72 bp CTCACTCCCGTGGTCGTGGGCCTCTCACCGCCAGAATaGAGCCACCTGGCTCCTTCACCTCTCAATAATCCT +
Preference number: 3 (lower is better)
Translates to: LTPVVVGLSPPE*SHLAPSPLNNP
Trigger: AGGATTATTGAGAGGTGAAGGAGCCAGGTGGCTTCATTCTGGCGGTGAGAGGCCCACGACCACGGGAGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR GCA 72 bp TTAGAAACTCTCTTGCAAAGTGCTACCCTCCCGAGTTaGAGAGCTGTGAGGCTTCAGCCGGCCGCTGCTCCC +
Preference number: 3 (lower is better)
Translates to: LETLLQSATLPS*RAVRLQPAAAP
Trigger: GGGAGCAGCGGCCGGCTGAAGCCTCACAGCTCTGCAACTCGGGAGGGTAGCACTTTGCAAGAGAGTTTCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570891.5
3UTR CCA 72 bp AGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTaGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAG +
Preference number: 3 (lower is better)
Translates to: RRGDGIRAGTFF*WELAFQKGAAE
Trigger: CTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CAA 90 bp ATGGTGAGCCACACCTGGAATGCGGTCAGCTGCTCGGCGAAGAACGGGCTGTGCTGTAGTGCGAACTGCTaGAAGGACTTGACGATCAAG +
Preference number: 3 (lower is better)
Translates to: MVSHTWNAVSCSAKNGLCCSANC*KDLTIK
Trigger: CTTGATCGTCAAGTCCTTCAAGCAGTTCGCACTACA...GCACAGCCCGTTCTTCGCCGAGCAGCTGACCGCATTCCAGGTGTGGCTCACCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR-3UTR CAA 90 bp CCAGGGATCTTTTCTATCAAATCCAGTGTGACGCCAGGCACCAGACTGACACATCAGCGCAGGGCGATCTaGATGGGGGTGGTGAGGCAG +
Preference number: 3 (lower is better)
Translates to: PGIFSIKSSVTPGTRLTHQRRAI*MGVVRQ
Trigger: CTGCCTCACCACCCCCATCAAGATCGCCCTGCGCTG...ATGTGTCAGTCTGGTGCCTGGCGTCACACTGGATTTGATAGAAAAGATCCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR TCA 72 bp AGAACGGGCTGTGCCGAAACGCAGTGCCTTCCTCGATaGTCGTCGGCAGCTGAGACAGACAGATGTCAACAG +
Preference number: 3 (lower is better)
Translates to: RTGCAETQCLPR*SSAAETDRCQQ
Trigger: CTGTTGACATCTGTCTGTCTCAGCTGCCGACGATCATCGAGGAAGGCACTGCGTTTCGGCACAGCCCGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR GCA 72 bp GCTACCTCCAGCTCCTGCTCCCGCTGTAGTGCGAACTaGTTGAAGGACTTGACGATCAAGCCAGCATTGGAG +
Preference number: 3 (lower is better)
Translates to: ATSSSCSRCSAN*LKDLTIKPALE
Trigger: CTCCAATGCTGGCTTGATCGTCAAGTCCTTCAAGCAGTTCGCACTACAGCGGGAGCAGGAGCTGGAGGTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR CCA 72 bp TGGTCGTGGGCCTCTCACCGCCAGAATGAAGCCACCTaGCTCCTTCACCTCTCAATAATCCTGATTCCCGAC +
Preference number: 3 (lower is better)
Translates to: WSWASHRQNEAT*LLHLSIILIPD
Trigger: GTCGGGAATCAGGATTATTGAGAGGTGAAGGAGCCAGGTGGCTTCATTCTGGCGGTGAGAGGCCCACGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CAA 90 bp TTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGACCTTCTTCCTCTCTCTaGGTTTCCCGAATTTCCAGT +
Preference number: 3 (lower is better)
Translates to: FSAQTWGWDSCRNLLLVGPSSSL*VSRISS
Trigger: ACTGGAAATTCGGGAAACCAAGAGAGAGGAAGAAGG...TCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR GCA 72 bp CAGCATTGGAGCAGTCGTAGACGAAGATCGACGGGCTaGCCATCCACGTCTGCAGGTCATATATGGACAGAG +
Preference number: 3 (lower is better)
Translates to: QHWSSRRRRSTG*PSTSAGHIWTE
Trigger: CTCTGTCCATATATGACCTGCAGACGTGGATGGGCAGCCCGTCGATCTTCGTCTACGACTGCTCCAATGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR-3UTR CAA 90 bp CGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCGTGGTTGTGTTCTGTTaGCAAAACTGCTCATACACG +
Preference number: 3 (lower is better)
Translates to: RNLLLVGARIPKRSSGGAVVVFC*QNCSYT
Trigger: CGTGTATGAGCAGTTTTGCAAACAGAACACAACCAC...GGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CAA 90 bp AGTCGTAGACGAAGATCGACGGGCTGCCCATCCACGTCTGCAGGTCATATATGGGACGTGCAGAGCTTCTaGACTTCATCCACAGTTGGG +
Preference number: 3 (lower is better)
Translates to: SRRRRSTGCPSTSAGHIWDVQSF*TSSTVG
Trigger: CCCAACTGTGGATGAAGTCAAGAAGCTCTGCACGTC...CCATATATGACCTGCAGACGTGGATGGGCAGCCCGTCGATCTTCGTCTACGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR GCA 72 bp AATACCATCATTGTGGTTGTGTTCTGTTTGCAAAACTaGTCATACACGCCCTGCGGCCCCTCCTGGGCGGGA +
Preference number: 3 (lower is better)
Translates to: NTIIVVVFCLQN*SYTPCGPSWAG
Trigger: TCCCGCCCAGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCACAATGATGGTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR GCA 72 bp AAAAATCTTCCAAGCAAGTCCAATGCTCTCAGCCGGTaGACTTGGCTTAACAGCACCTGCAGGACGATGGGC +
Preference number: 3 (lower is better)
Translates to: KNLPSKSNALSR*TWLNSTCRTMG
Trigger: GCCCATCGTCCTGCAGGTGCTGTTAAGCCAAGTGCACCGGCTGAGAGCATTGGACTTGCTTGGAAGATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR TCA 72 bp TCTCAAAACAAACAGAAACGCGTGTTGGGTAAGAATTaGGTTGAAGGACTGGATGGGAAGCTGCGTGTGCGG +
Preference number: 3 (lower is better)
Translates to: SQNKQKRVLGKN*VEGLDGKLRVR
Trigger: CCGCACACGCAGCTTCCCATCCAGTCCTTCAACTCAATTCTTACCCAACACGCGTTTCTGTTTGTTTTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CAA 90 bp TGTTGGTCACTCTCTGCTCTTAGCTTCACATTACCATTTCGTGTTTTGTCAAAGTGGGTAAGAATTGAGTaGAAGGACTGGATGGGAAGC +
Preference number: 3 (lower is better)
Translates to: CWSLSALSFTLPFRVLSKWVRIE*KDWMGS
Trigger: GCTTCCCATCCAGTCCTTCAACTCAATTCTTACCCA...CTTTGACAAAACACGAAATGGTAATGTGAAGCTAAGAGCAGAGAGTGACCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR-3UTR CAA 90 bp CTCAAAACAAACAGAAACGCGTGTTGGGTAAGAATTGAGTTGAAGGACTGGATGATACCATCATTGTGGTaGTGTTCTGTTTGCAAAACT +
Preference number: 3 (lower is better)
Translates to: LKTNRNACWVRIELKDWMIPSLW*CSVCKT
Trigger: AGTTTTGCAAACAGAACACAACCACAATGATGGTAT...CATCCAGTCCTTCAACTCAATTCTTACCCAACACGCGTTTCTGTTTGTTTTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp GTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGGAGCGGGGGCGCCCAGACCTCCCCGTTaGCTGTGGGCCGGGGCACCC +
Preference number: 4 (lower is better)
Translates to: VQAARGAHGGGLQGGAGAPRPPR*LWAGAP
Trigger: GGGTGCCCCGGCCCACAGTCAACGGGGAGGTCTGGG...CGCCCCCGCTCCACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCAC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp GTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGGAGCGGGGGCGCTTCCCACGGCCAGGTaGGGCCAGTGCGGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: VQAARGAHGGGLQGGAGALPTAR*GQCGWK
Trigger: CTTCCACCCGCACTGGCCTCACCTGGCCGTGGGAAG...CGCCCCCGCTCCACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCAC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp GTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGGAGCGGGGGCGCAGATGGCCACCCACTaGCGCAGCAAGGGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: VQAARGAHGGGLQGGAGAQMATH*RSKGCG
Trigger: CCCGCACCCCTTGCTGCGCCAGTGGGTGGCCATCTG...CGCCCCCGCTCCACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCAC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR CCA 90 bp GTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGGAGCGGGGGCGCTGTCCCCGCGCCTGTaGGGAAGAGCAGCCCTTCGG +
Preference number: 4 (lower is better)
Translates to: VQAARGAHGGGLQGGAGALSPRL*GRAALR
Trigger: CCGAAGGGCTGCTCTTCCCCACAGGCGCGGGGACAG...CGCCCCCGCTCCACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCAC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp AGACAGCCCACGTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGGGAAGGCCAGGCAGCTaGTGGCGCCGACCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: RQPTCRRHAVPMGVGSRVGRPGS*WRRPAG
Trigger: GCCAGCGGGTCGGCGCCATCAGCTGCCTGGCCTTCC...CACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCACGTGGGCTGTCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp GTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGGAGCGGGGGCGCCGTCGGGACGCTTCTaGAGGGAGGCCTTCACCACC +
Preference number: 4 (lower is better)
Translates to: VQAARGAHGGGLQGGAGAPSGRF*REAFTT
Trigger: GGTGGTGAAGGCCTCCCTGCAGAAGCGTCCCGACGG...CGCCCCCGCTCCACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp GTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGGAGCGGGGGCGGATCCGCACGTCTCCTaGGCTCATGAGGAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: VQAARGAHGGGLQGGAGADPHVS*AHEEAG
Trigger: ACCGGCCTCCTCATGAGCTCAGGAGACGTGCGGATC...CGCCCCCGCTCCACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CACAGGTCGGGCTGCTGTCCCCGCGCCTGTGGGGAAGAGCAGCCCTTCGGAGGGCAGCGGGGCCTGTGGTaGCCGGCCGGCCAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: HRSGCCPRACGEEQPFGGQRGLW*PAGQKA
Trigger: TGCCTTCTGGCCGGCCGGGCACCACAGGCCCCGCTG...CCCTCCGAAGGGCTGCTCTTCCCCACAGGCGCGGGGACAGCAGCCCGACCTGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CACAGGTCGGGCTGCTGTCCCCGCGCCTGTGGGGAAGAGCAGCCCTTCGGAGGGGCAGGCGGCACGCGGTaGCCATGGGGGTGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: HRSGCCPRACGEEQPFGGAGGTR*PWGWAP
Trigger: TGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGC...CCCTCCGAAGGGCTGCTCTTCCCCACAGGCGCGGGGACAGCAGCCCGACCTGTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp GCCGGGCCTCGCCACACCAGCTCTCACTCCCGTGGTCGTGGGCCTCTCACCGCCGAGAGGTGGTGGGCCTaGCTGGGGCAGCGCCTCTCG +
Preference number: 4 (lower is better)
Translates to: AGPRHTSSHSRGRGPLTAERWWA*LGQRLS
Trigger: CGAGAGGCGCTGCCCCAGCCAGGCCCACCACCTCTC...GGCGGTGAGAGGCCCACGACCACGGGAGTGAGAGCTGGTGTGGCGAGGCCCGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp CACAGGTCGGGCTGCTGTCCCCGCGCCTGTGGGGAAGAGCAGCCCTTCGGAGGGGGCACGCGGTGCCCATaGGGGTGGGCTCCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: HRSGCCPRACGEEQPFGGGTRCP*GWAPGW
Trigger: CCACCCTGGAGCCCACCCCCATGGGCACCGCGTGCC...CCCTCCGAAGGGCTGCTCTTCCCCACAGGCGCGGGGACAGCAGCCCGACCTGTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CACAGGTCGGGCTGCTGTCCCCGCGCCTGTGGGGAAGAGCAGCCCTTCGGAGGGCTGGCGGGGGCCGACTaGGTGAGGGAGGAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: HRSGCCPRACGEEQPFGGLAGAD*VREEVS
Trigger: GGACACCTCCTCCCTCACGCAGTCGGCCCCCGCCAG...CCCTCCGAAGGGCTGCTCTTCCCCACAGGCGCGGGGACAGCAGCCCGACCTGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp GTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGGAGCGGGGGCGTCTCGGCTGACCGGCTaGTTGGCCACATCGTTGGTC +
Preference number: 4 (lower is better)
Translates to: VQAARGAHGGGLQGGAGASRLTG*LATSLV
Trigger: GACCAACGATGTGGCCAAGCAGCCGGTCAGCCGAGA...CGCCCCCGCTCCACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp CACAGGTCGGGCTGCTGTCCCCGCGCCTGTGGGGAAGAGCAGCCCTTCGGAGGGTGGAGCTGCTGGTGCTaGACGCCGGAGGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: HRSGCCPRACGEEQPFGGWSCWC*TPEGSP
Trigger: GGGGCTCCCCTCCGGCGTCCAGCACCAGCAGCTCCA...CCCTCCGAAGGGCTGCTCTTCCCCACAGGCGCGGGGACAGCAGCCCGACCTGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp GTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGGAGCGGGGGCGGGTGCACCTGGATGCTaGTGCTCAGTGGGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: VQAARGAHGGGLQGGAGAGAPGC*CSVGSH
Trigger: GTGGCTTCCCACTGAGCACCAGCATCCAGGTGCACC...CGCCCCCGCTCCACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp AGACAGCCCACGTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGCCGCGGGGGTGCACCTaGATGCTGGTGCTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: RQPTCRRHAVPMGVGSRVPRGCT*MLVLSG
Trigger: CCCACTGAGCACCAGCATCCAGGTGCACCCCCGCGG...CACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCACGTGGGCTGTCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp GTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGGAGCGGGGGCGTGTGCTACACCTGTGTaGGGGCACAGGCATGGAGAC +
Preference number: 4 (lower is better)
Translates to: VQAARGAHGGGLQGGAGACATPV*GHRHGD
Trigger: GTCTCCATGCCTGTGCCCTCACACAGGTGTAGCACA...CGCCCCCGCTCCACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp GCCGGGCCTCGCCACACCAGCTCTCACTCCCGTGGTCGTGGGCCTCTCACCGCCGCACGCCCTGTGAGCTaGGTGAGGCCGGGACTCTCT +
Preference number: 4 (lower is better)
Translates to: AGPRHTSSHSRGRGPLTAARPVS*VRPGLS
Trigger: AGAGAGTCCCGGCCTCACTCAGCTCACAGGGCGTGC...GGCGGTGAGAGGCCCACGACCACGGGAGTGAGAGCTGGTGTGGCGAGGCCCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp ACGGCAGGCCACCAGCCACACCGCAGGAGAGCCGGGCCTCGCCACACCAGCTCTACGACCGGCCCATCGTaGTCGCCTGCACCCGGTTCC +
Preference number: 4 (lower is better)
Translates to: TAGHQPHRRRAGPRHTSSTTGPS*SPAPGS
Trigger: GGAACCGGGTGCAGGCGAGCACGATGGGCCGGTCGT...AGAGCTGGTGTGGCGAGGCCCGGCTCTCCTGCGGTGTGGCTGGTGGCCTGCCGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR GCA 90 bp GCCGGGCCTCGCCACACCAGCTCTCACTCCCGTGGTCGTGGGCCTCTCACCGCCAGCCACTCTCAGCCCTaGGGGTCCCGCACTCGTCTG +
Preference number: 4 (lower is better)
Translates to: AGPRHTSSHSRGRGPLTASHSQP*GSRTRL
Trigger: CAGACGAGTGCGGGACCCGCAGGGCTGAGAGTGGCT...GGCGGTGAGAGGCCCACGACCACGGGAGTGAGAGCTGGTGTGGCGAGGCCCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR GCA 90 bp GTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGGAGCGGGGGCGGCTCCTCCTTGGCGTTaGGACGTAAGGACGTGCAGA +
Preference number: 4 (lower is better)
Translates to: VQAARGAHGGGLQGGAGAAPPWR*DVRTCR
Trigger: TCTGCACGTCCTTACGTCGCAACGCCAAGGAGGAGC...CGCCCCCGCTCCACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp GGAGGGGCCGCCTCTGTCCTGCCTTGTCACGTCCCGGCCAGCCCCAGCTCAGTCGTGTGTGCCCCCAGGTaGCGGCCGTGGTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: GGAASVLPCHVPASPSSVVCAPR*RPWCHL
Trigger: CAGATGGCACCACGGCCGGCACCTGGGGGCACACAC...GACTGAGCTGGGGCTGGCCGGGACGTGACAAGGCAGGACAGAGGCGGCCCCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp GTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGGAGCGGGGGCGCTTGTACCGGGCCCTTaGCTGCCAGTTCTCGTACTG +
Preference number: 4 (lower is better)
Translates to: VQAARGAHGGGLQGGAGALVPGP*LPVLVL
Trigger: CAGTACGAGAACTGGCAGCCAAGGGCCCGGTACAAG...CGCCCCCGCTCCACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp CCCCGTGCCCCGGCGAGTGACAGCTTCACTATGTACAGCAGGCGGCCGTGGCCTGGTGGTGGGCCTGGCTaGGGCAGCGCCTCTCGCTCG +
Preference number: 4 (lower is better)
Translates to: PRAPASDSFTMYSRRPWPGGGPG*GSASRS
Trigger: CGAGCGAGAGGCGCTGCCCCAGCCAGGCCCACCACC...AGGCCACGGCCGCCTGCTGTACATAGTGAAGCTGTCACTCGCCGGGGCACGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp GCCGGGCCTCGCCACACCAGCTCTCACTCCCGTGGTCGTGGGCCTCTCACCGCCCCCAGGTGCCGGCCGTaGTGCCATCTGCACATGCGT +
Preference number: 4 (lower is better)
Translates to: AGPRHTSSHSRGRGPLTAPRCRP*CHLHMR
Trigger: ACGCATGTGCAGATGGCACCACGGCCGGCACCTGGG...GGCGGTGAGAGGCCCACGACCACGGGAGTGAGAGCTGGTGTGGCGAGGCCCGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp CCCCGGCGAGTGACAGCTTCACTATGTACAGCAGGCGGCCGTGGCCTGGTGGGCCGGGGGCCGACTGCGTaGGGGAGGAGGTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PRRVTASLCTAGGRGLVGRGPTA*GRRCPG
Trigger: TCCTGGACACCTCCTCCCTCACGCAGTCGGCCCCCG...GCCCACCAGGCCACGGCCGCCTGCTGTACATAGTGAAGCTGTCACTCGCCGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp GTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGGAGCGGGGGCGGCACCGTGGCGGAGATaGAACTTTTGTGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: VQAARGAHGGGLQGGAGAAPWRR*NFCVQQ
Trigger: CTGCTGGACACAAAAGTTTCATCTCCGCCACGGTGC...CGCCCCCGCTCCACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp ACGGCAGGCCACCAGCCACACCGCAGGAGAGCCGGGCCTCGCCACACCAGCTCTGCTGGGCCTGCCTCCTaGCACGGCTGTTTCGCAGGA +
Preference number: 4 (lower is better)
Translates to: TAGHQPHRRRAGPRHTSSAGPAS*HGCFAG
Trigger: TCCTGCGAAACAGCCGTGTCAGGAGGCAGGCCCAGC...AGAGCTGGTGTGGCGAGGCCCGGCTCTCCTGCGGTGTGGCTGGTGGCCTGCCGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp GCCGGGCCTCGCCACACCAGCTCTCACTCCCGTGGTCGTGGGCCTCTCACCGCCGATCCGCACGTCTCCTaGGCTCATGAGGAGGCCGGT +
Preference number: 4 (lower is better)
Translates to: AGPRHTSSHSRGRGPLTADPHVS*AHEEAG
Trigger: ACCGGCCTCCTCATGAGCTCAGGAGACGTGCGGATC...GGCGGTGAGAGGCCCACGACCACGGGAGTGAGAGCTGGTGTGGCGAGGCCCGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp ACGGCAGGCCACCAGCCACACCGCAGGAGAGCCGGGCCTCGCCACACCAGCTCTTCCAGCTCAGCCCCCTaGGGGCCAGGTGTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: TAGHQPHRRRAGPRHTSSSSSAP*GPGVSL
Trigger: CAGAGACACACCTGGCCCTCAGGGGGCTGAGCTGGA...AGAGCTGGTGTGGCGAGGCCCGGCTCTCCTGCGGTGTGGCTGGTGGCCTGCCGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CCCCGGCGAGTGACAGCTTCACTATGTACAGCAGGCGGCCGTGGCCTGGTGGGCGTGTCCAGGACGCGCTaGGGCCGGGCGTTCACGGTG +
Preference number: 4 (lower is better)
Translates to: PRRVTASLCTAGGRGLVGVSRTR*GRAFTV
Trigger: CACCGTGAACGCCCGGCCGCAGCGCGTCCTGGACAC...GCCCACCAGGCCACGGCCGCCTGCTGTACATAGTGAAGCTGTCACTCGCCGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp GTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGGAGCGGGGGCGCCCGTAGGGATGTCCTaGACCTTCATCTCACGGTCT +
Preference number: 4 (lower is better)
Translates to: VQAARGAHGGGLQGGAGAPVGMS*TFISRS
Trigger: AGACCGTGAGATGAAGGTGCAGGACATCCCTACGGG...CGCCCCCGCTCCACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp GCCGAGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACCCGTGGCCGCGGGGGTaGACCTGGATGCTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: AEVASAWAAQGWRRGWCHPWPRG*TWMLVL
Trigger: GAGCACCAGCATCCAGGTGCACCCCCGCGGCCACGG...GTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCTCGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp GCCGAGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACAGGAGCCCCAGCGCCTaGCTCTCCGCCAGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: AEVASAWAAQGWRRGWCHRSPSA*LSARAL
Trigger: CAGAGCCCTGGCGGAGAGGCAGGCGCTGGGGCTCCT...GTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCTCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp AGACAGCCCACGTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGGGGGAGGGTGGGCTGTaGGCTTCCTGCTCAGTGATG +
Preference number: 4 (lower is better)
Translates to: RQPTCRRHAVPMGVGSRVGEGGL*ASCSVM
Trigger: CATCACTGAGCAGGAAGCGCACAGCCCACCCTCCCC...CACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCACGTGGGCTGTCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp GCCGAGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACGACCTGCCTCCCCTGTaGACCGCCACAGCGGCCCCT +
Preference number: 4 (lower is better)
Translates to: AEVASAWAAQGWRRGWCHDLPPL*TATAAP
Trigger: AGGGGCCGCTGTGGCGGTGCACAGGGGAGGCAGGTC...GTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCTCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp GGAGGGGCCGCCTCTGTCCTGCCTTGTCACGTCCCGGCCAGCCCCAGCTCAGTCACCTCGCCAAGGACCTaGCTCCCCTGTGCACCGCCA +
Preference number: 4 (lower is better)
Translates to: GGAASVLPCHVPASPSSVTSPRT*LPCAPP
Trigger: TGGCGGTGCACAGGGGAGGCAGGTCCTTGGCGAGGT...GACTGAGCTGGGGCTGGCCGGGACGTGACAAGGCAGGACAGAGGCGGCCCCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CACAGGTCGGGCTGCTGTCCCCGCGCCTGTGGGGAAGAGCAGCCCTTCGGAGGGCTTCCGGACCCGGGCTaGTTTCTCGGCCCAGACGTG +
Preference number: 4 (lower is better)
Translates to: HRSGCCPRACGEEQPFGGLPDPG*FLGPDV
Trigger: CACGTCTGGGCCGAGAAAGCAGCCCGGGTCCGGAAG...CCCTCCGAAGGGCTGCTCTTCCCCACAGGCGCGGGGACAGCAGCCCGACCTGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp GTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGGAGCGGGGGCGCCCTCTGGAGCCACCTaGCTTTTGACAGGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: VQAARGAHGGGLQGGAGAPSGAT*LLTGGD
Trigger: ATCACCACCTGTCAAAAGGCAGGTGGCTCCAGAGGG...CGCCCCCGCTCCACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp CCCCGGCGAGTGACAGCTTCACTATGTACAGCAGGCGGCCGTGGCCTGGTGGGCCGGCCTGGCTGGTCCTaGCCTTCAGCCCCGAGGCTC +
Preference number: 4 (lower is better)
Translates to: PRRVTASLCTAGGRGLVGRPGWS*PSAPRL
Trigger: GAGCCTCGGGGCTGAAGGCCAGGACCAGCCAGGCCG...GCCCACCAGGCCACGGCCGCCTGCTGTACATAGTGAAGCTGTCACTCGCCGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR CCA 90 bp AGACAGCCCACGTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGCGGGCTGTCTCGCACTaGGGTCAAACTCCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: RQPTCRRHAVPMGVGSRVRAVSH*GQTPSL
Trigger: GAGGGAGGGAGTTTGACCCCAGTGCGAGACAGCCCG...CACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCACGTGGGCTGTCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp CCCCGGCGAGTGACAGCTTCACTATGTACAGCAGGCGGCCGTGGCCTGGTGGGCTGGAGCTGCTGGTGCTaGACGCCGGAGGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: PRRVTASLCTAGGRGLVGWSCWC*TPEGSP
Trigger: GGGGCTCCCCTCCGGCGTCCAGCACCAGCAGCTCCA...GCCCACCAGGCCACGGCCGCCTGCTGTACATAGTGAAGCTGTCACTCGCCGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp AGACAGCCCACGTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGTGTCGTAGACGCGGATaGAGCCGTCACCGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: RQPTCRRHAVPMGVGSRVCRRRG*SRHRGQ
Trigger: CTGGCCTCGGTGACGGCTCCATCCGCGTCTACGACA...CACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCACGTGGGCTGTCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp GCCGAGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACTACAGCAGGCGGCCGTaGCCTGGTGGGCCCGGGTCA +
Preference number: 4 (lower is better)
Translates to: AEVASAWAAQGWRRGWCHYSRRP*PGGPGS
Trigger: TGACCCGGGCCCACCAGGCCACGGCCGCCTGCTGTA...GTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCTCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp AGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACCCGGGAGAGGTGGTGGGCCTaGCTGGGGCAGCGCCTCTCG +
Preference number: 4 (lower is better)
Translates to: RSHQHGRLKAGDGAGVTRERWWA*LGQRLS
Trigger: CGAGAGGCGCTGCCCCAGCCAGGCCCACCACCTCTC...CCGGGTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp CCGTGGTCGTGGGCCTCTCACCGCCAGAATGAAGCCACCTGGCTCCTTCACCTCCCCAGACCTCCCCGTTaGCTGTGGGCCGGGGCACCC +
Preference number: 4 (lower is better)
Translates to: PWSWASHRQNEATWLLHLPRPPR*LWAGAP
Trigger: GGGTGCCCCGGCCCACAGTCAACGGGGAGGTCTGGG...GAGGTGAAGGAGCCAGGTGGCTTCATTCTGGCGGTGAGAGGCCCACGACCACGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp AGACAGCCCACGTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGCGGCGATGCACGGCGTaGAGGGGTGGAATTTCACCA +
Preference number: 4 (lower is better)
Translates to: RQPTCRRHAVPMGVGSRVRRCTA*RGGISP
Trigger: TGGTGAAATTCCACCCCTTCACGCCGTGCATCGCCG...CACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCACGTGGGCTGTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp GCCGGGCCTCGCCACACCAGCTCTCACTCCCGTGGTCGTGGGCCTCTCACCGCCGCCAGCCACGATGAGTaGGCGGTGGGAATCACAGGA +
Preference number: 4 (lower is better)
Translates to: AGPRHTSSHSRGRGPLTAASHDE*AVGITG
Trigger: TCCTGTGATTCCCACCGCTCACTCATCGTGGCTGGC...GGCGGTGAGAGGCCCACGACCACGGGAGTGAGAGCTGGTGTGGCGAGGCCCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp GCCGGGCCTCGCCACACCAGCTCTCACTCCCGTGGTCGTGGGCCTCTCACCGCCAGCCCTCCCCTTCCCTaGCATTCCAGACACGACAGC +
Preference number: 4 (lower is better)
Translates to: AGPRHTSSHSRGRGPLTASPPLP*HSRHDS
Trigger: GCTGTCGTGTCTGGAATGTCAGGGAAGGGGAGGGCT...GGCGGTGAGAGGCCCACGACCACGGGAGTGAGAGCTGGTGTGGCGAGGCCCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp GCAGGCCACCAGCCACACCGCAGGAGAGCCGGGCCTCGCCACACCAGCTCTCACCCCATCGTGCTCGCCTaGACCCGGTTCCTCAACCTC +
Preference number: 4 (lower is better)
Translates to: AGHQPHRRRAGPRHTSSHPIVLA*TRFLNL
Trigger: GAGGTTGAGGAACCGGGTGCAGGCGAGCACGATGGG...GTGAGAGCTGGTGTGGCGAGGCCCGGCTCTCCTGCGGTGTGGCTGGTGGCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR GCA 90 bp AGACAGCCCACGTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGCGCACTCGTCTGAGCTaGTGCAACCAGAGCCACGAC +
Preference number: 4 (lower is better)
Translates to: RQPTCRRHAVPMGVGSRVRTRLS*CNQSHD
Trigger: GTCGTGGCTCTGGTTGCAGCAGCTCAGACGAGTGCG...CACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCACGTGGGCTGTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR GCA 90 bp GCCGAGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACCCTCATTCTCGGGGCTaGCCAGGGTGCTGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: AEVASAWAAQGWRRGWCHPHSRG*PGCCWR
Trigger: GCGCCAGCAGCACCCTGGGCAGCCCCGAGAATGAGG...GTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCTCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp GTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGGAGCGGGGGCGTCGAAGGACAGGATATaGTCCTCATTCTCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: VQAARGAHGGGLQGGAGASKDRI*SSFSGL
Trigger: CAGCCCCGAGAATGAGGAGCATATCCTGTCCTTCGA...CGCCCCCGCTCCACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp GCAGGCCACCAGCCACACCGCAGGAGAGCCGGGCCTCGCCACACCAGCTCTCACGGGGGTGCACCTGGATaGTGGTGCTCAGTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: AGHQPHRRRAGPRHTSSHGGAPG*WCSVGS
Trigger: GCTTCCCACTGAGCACCAGCATCCAGGTGCACCCCC...GTGAGAGCTGGTGTGGCGAGGCCCGGCTCTCCTGCGGTGTGGCTGGTGGCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp GTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGGAGCGGGGGCGGGGCTTATTGGGTCATaGGAGCTTTGCCCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: VQAARGAHGGGLQGGAGAGLIGS*ELCPLV
Trigger: AACCAGAGGGCAAAGCTCCCATGACCCAATAAGCCC...CGCCCCCGCTCCACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR CCA 90 bp TTCAGCCGGCCGCTGCTCCCGTGCAGTCCTAAAAGGCCCTCCAAGGCTTCTGCCTCCGCGCGGCCTGGCTaGTCCTGGCCTTCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: FSRPLLPCSPKRPSKASASARPG*SWPSAP
Trigger: CGGGGCTGAAGGCCAGGACCAGCCAGGCCGCGCGGA...GGCAGAAGCCTTGGAGGGCCTTTTAGGACTGCACGGGAGCAGCGGCCGGCTGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CCA 90 bp GCCGAGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACCAGGCAGGCCGCTCTTaGTGCCGGTTCGCCCACTGG +
Preference number: 4 (lower is better)
Translates to: AEVASAWAAQGWRRGWCHQAGRS*CRFAHW
Trigger: CCAGTGGGCGAACCGGCACCAAGAGCGGCCTGCCTG...GTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCTCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR CCA 90 bp AGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACCCGGTGGCGTGCATGTACGTaGGCGGCAGACGCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RSHQHGRLKAGDGAGVTRWRACT*AADAGC
Trigger: GCAGCCCGCGTCTGCCGCCCACGTACATGCACGCCA...CCGGGTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp ACCACAGGCCCAGCTGTCAGCCGAGGTCGCATCAGCATGGGCGGCTCAAGGCTGGCACGCCCTTGTTGGTaGGGCTGGCGGGGGCCGACT +
Preference number: 4 (lower is better)
Translates to: TTGPAVSRGRISMGGSRLARPCW*GWRGPT
Trigger: AGTCGGCCCCCGCCAGCCCCACCAACAAGGGCGTGC...CAGCCTTGAGCCGCCCATGCTGATGCGACCTCGGCTGACAGCTGGGCCTGTGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp ACCACAGGCCCAGCTGTCAGCCGAGGTCGCATCAGCATGGGCGGCTCAAGGCTGTGTGCACGCCCTTGTTaGTGGGGCTGGCGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: TTGPAVSRGRISMGGSRLCARPC*WGWRGP
Trigger: CGGCCCCCGCCAGCCCCACCAACAAGGGCGTGCACA...CAGCCTTGAGCCGCCCATGCTGATGCGACCTCGGCTGACAGCTGGGCCTGTGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp GACCCGGGCTGCTTTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTGTGCACGCCCTTGTTaGTGGGGCTGGCGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: DPGCFLGPDVGMGFVPEPCARPC*WGWRGP
Trigger: CGGCCCCCGCCAGCCCCACCAACAAGGGCGTGCACA...AGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAAAGCAGCCCGGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp CCCCGGCGAGTGACAGCTTCACTATGTACAGCAGGCGGCCGTGGCCTGGTGGGCGCGATCAGGTCCGCCTaGGGGTGGATGTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PRRVTASLCTAGGRGLVGAIRSA*GWMSRA
Trigger: GGCCCTGGACATCCACCCCCAGGCGGACCTGATCGC...GCCCACCAGGCCACGGCCGCCTGCTGTACATAGTGAAGCTGTCACTCGCCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp CAAAAAGGAGCAGCGGAGGGGCCGCCTCTGTCCTGCCTTGTCACGTCCCGGCCATACAGCAGGCGGCCGTaGCCTGGTGGGCCCGGGTCA +
Preference number: 4 (lower is better)
Translates to: QKGAAEGPPLSCLVTSRPYSRRP*PGGPGS
Trigger: TGACCCGGGCCCACCAGGCCACGGCCGCCTGCTGTA...TGGCCGGGACGTGACAAGGCAGGACAGAGGCGGCCCCTCCGCTGCTCCTTTTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp CCGTGGTCGTGGGCCTCTCACCGCCAGAATGAAGCCACCTGGCTCCTTCACCTCGGTGGTGGGCCTGGCTaGGGCAGCGCCTCTCGCTCG +
Preference number: 4 (lower is better)
Translates to: PWSWASHRQNEATWLLHLGGGPG*GSASRS
Trigger: CGAGCGAGAGGCGCTGCCCCAGCCAGGCCCACCACC...GAGGTGAAGGAGCCAGGTGGCTTCATTCTGGCGGTGAGAGGCCCACGACCACGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp GACCCGGGCTGCTTTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTGGCTGGAGACGGGGCTaGTGTCACCCGGAGCCGTCC +
Preference number: 4 (lower is better)
Translates to: DPGCFLGPDVGMGFVPEPGWRRG*CHPEPS
Trigger: GGACGGCTCCGGGTGACACCAGCCCCGTCTCCAGCC...AGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAAAGCAGCCCGGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp GCCGGGCCTCGCCACACCAGCTCTCACTCCCGTGGTCGTGGGCCTCTCACCGCCAGCTGCGTGTGCGGGTaGAGCTGGGCTTCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: AGPRHTSSHSRGRGPLTASCVCG*SWASGR
Trigger: TCTTCCAGAAGCCCAGCTCCACCCGCACACGCAGCT...GGCGGTGAGAGGCCCACGACCACGGGAGTGAGAGCTGGTGTGGCGAGGCCCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp GCCAGGTCCCAGGCTTGCCACATGGCGTGCATGTACGTGGGCGGCAGACGCGGGCTTCAGGCCTCACGATaGCCCTGCTCTCGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: ARSQACHMACMYVGGRRGLQASR*PCSRPP
Trigger: TGGAGGCCGAGAGCAGGGTCATCGTGAGGCCTGAAG...CCCGCGTCTGCCGCCCACGTACATGCACGCCATGTGGCAAGCCTGGGACCTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR TCA 90 bp GCAGGTTCACATCACTCTGGGGAGGAGGGCGGGGATACTCACGCTGTCCACTGCCCCAGACCTCCCCGTTaGCTGTGGGCCGGGGCACCC +
Preference number: 4 (lower is better)
Translates to: AGSHHSGEEGGDTHAVHCPRPPR*LWAGAP
Trigger: GGGTGCCCCGGCCCACAGTCAACGGGGAGGTCTGGG...GCAGTGGACAGCGTGAGTATCCCCGCCCTCCTCCCCAGAGTGATGTGAACCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR TCA 90 bp CACAGGTCGGGCTGCTGTCCCCGCGCCTGTGGGGAAGAGCAGCCCTTCGGAGGGGCAATGAGGTTTCCCTaGAGGCAGGCTTCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: HRSGCCPRACGEEQPFGGAMRFP*RQASCP
Trigger: GGGGCAGGAAGCCTGCCTTCAGGGAAACCTCATTGC...CCCTCCGAAGGGCTGCTCTTCCCCACAGGCGCGGGGACAGCAGCCCGACCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR TCA 90 bp AGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACCCGGCGCTGCTGCTGGTGCTaGGGTTTCCGGGGGAGAACG +
Preference number: 4 (lower is better)
Translates to: RSHQHGRLKAGDGAGVTRRCCWC*GFRGRT
Trigger: CGTTCTCCCCCGGAAACCTCAGCACCAGCAGCAGCG...CCGGGTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp ACGGCAGGCCACCAGCCACACCGCAGGAGAGCCGGGCCTCGCCACACCAGCTCTCGCTCCTTGCGGATCTaGCTCTCCAGGTCGTGCTCT +
Preference number: 4 (lower is better)
Translates to: TAGHQPHRRRAGPRHTSSRSLRI*LSRSCS
Trigger: AGAGCACGACCTGGAGAGTCAGATCCGCAAGGAGCG...AGAGCTGGTGTGGCGAGGCCCGGCTCTCCTGCGGTGTGGCTGGTGGCCTGCCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp AGACAGCCCACGTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGCTCTCACCGCCAGAATaGAGCCACCTGGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: RQPTCRRHAVPMGVGSRVLSPPE*SHLAPS
Trigger: TGAAGGAGCCAGGTGGCTTCATTCTGGCGGTGAGAG...CACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCACGTGGGCTGTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp GAGCAGCCCTTCGGAGGGAAAGGAGCCCCGTGGATTAAGGCAGGGGCTACCTCGGCAGGCCGCTCTTGGTaGCGGTTCGCCCACTGGGCC +
Preference number: 4 (lower is better)
Translates to: EQPFGGKGAPWIKAGATSAGRSW*RFAHWA
Trigger: GGCCCAGTGGGCGAACCGGCACCAAGAGCGGCCTGC...CGAGGTAGCCCCTGCCTTAATCCACGGGGCTCCTTTCCCTCCGAAGGGCTGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR GCA 90 bp ACGGCAGGCCACCAGCCACACCGCAGGAGAGCCGGGCCTCGCCACACCAGCTCTGCTTGCCACATGGCGTaGATGTACGTGGGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: TAGHQPHRRRAGPRHTSSACHMA*MYVGGR
Trigger: TCTGCCGCCCACGTACATGCACGCCATGTGGCAAGC...AGAGCTGGTGTGGCGAGGCCCGGCTCTCCTGCGGTGTGGCTGGTGGCCTGCCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp GCAGGCCACCAGCCACACCGCAGGAGAGCCGGGCCTCGCCACACCAGCTCTCACGCACGTAGGGGAAGATaGCGACAGACAAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: AGHQPHRRRAGPRHTSSHARRGR*RQTRPG
Trigger: GCCTGGCCTTGTCTGTCGGCATCTTCCCCTACGTGC...GTGAGAGCTGGTGTGGCGAGGCCCGGCTCTCCTGCGGTGTGGCTGGTGGCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp AGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACCCGGGGAGACCACGCCGCCTaGATGTGTGTGCCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: RSHQHGRLKAGDGAGVTRGDHAA*MCVPPG
Trigger: ACCTGGGGGCACACACATGCAGGCGGCGTGGTCTCC...CCGGGTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp AGGGCTCGGCATCCCCAGAAGGGCCGGCAGGTTCACATCACTCTGGGGAGGAGGGGAAGGGAACGGCGGTaGCTGGAGAGGGAGCGAGGC +
Preference number: 4 (lower is better)
Translates to: RARHPQKGRQVHITLGRRGRERR*LERERG
Trigger: GCCTCGCTCCCTCTCCAGGCACCGCCGTTCCCTTCC...CCTCCTCCCCAGAGTGATGTGAACCTGCCGGCCCTTCTGGGGATGCCGAGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR GCA 90 bp CTCCCGAGTTGCAGAGCTGTGAGGCTTCAGCCGGCCGCTGCTCCCGTGCAGTCCCGGCCGCTGCTCCCGTaGAGTCCTAAAAGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: LPSCRAVRLQPAAAPVQSRPLLP*SPKRPS
Trigger: GGAGGGCCTTTTAGGACTGCACGGGAGCAGCGGCCG...GGACTGCACGGGAGCAGCGGCCGGCTGAAGCCTCACAGCTCTGCAACTCGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CCA 90 bp ACCACAGGCCCAGCTGTCAGCCGAGGTCGCATCAGCATGGGCGGCTCAAGGCTGGCCCACTGGGCCGACTaGGCTGAGGTCTCCGGCCAA +
Preference number: 4 (lower is better)
Translates to: TTGPAVSRGRISMGGSRLAHWAD*AEVSGQ
Trigger: TTGGCCGGAGACCTCAGCCCAGTCGGCCCAGTGGGC...CAGCCTTGAGCCGCCCATGCTGATGCGACCTCGGCTGACAGCTGGGCCTGTGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR CCA 90 bp GACCCGGGCTGCTTTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTGCCGGTTCGCCCACTaGGCCGACTGGGCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: DPGCFLGPDVGMGFVPEPCRFAH*ADWAEV
Trigger: GACCTCAGCCCAGTCGGCCCAGTGGGCGAACCGGCA...AGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAAAGCAGCCCGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR CCA 90 bp CACAGGTCGGGCTGCTGTCCCCGCGCCTGTGGGGAAGAGCAGCCCTTCGGAGGGCAGGTCCCAAGCCACTaGCTGCTCCTGAGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: HRSGCCPRACGEEQPFGGQVPSH*LLLRLY
Trigger: GTACAGCCTCAGGAGCAGCCAGTGGCTTGGGACCTG...CCCTCCGAAGGGCTGCTCTTCCCCACAGGCGCGGGGACAGCAGCCCGACCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR CCA 90 bp GTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGGAGCGGGGGCGCGATCAAGCCAGCATTaGAGCAGTCGTAGACGAAGA +
Preference number: 4 (lower is better)
Translates to: VQAARGAHGGGLQGGAGARSSQH*SSRRRR
Trigger: TCTTCGTCTACGACTGCTCCAATGCTGGCTTGATCG...CGCCCCCGCTCCACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp AGACAGCCCACGTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGGATGAAAACGAGAAGTaGCCGCAGCTCTCGGGCCGA +
Preference number: 4 (lower is better)
Translates to: RQPTCRRHAVPMGVGSRVDENEK*PQLSGR
Trigger: TCGGCCCGAGAGCTGCGGCCACTTCTCGTTTTCATC...CACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCACGTGGGCTGTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp GCAGGCCACCAGCCACACCGCAGGAGAGCCGGGCCTCGCCACACCAGCTCTCACTTCACGAGGTCCGCTTaGCACGAGCTGTCCACTGCG +
Preference number: 4 (lower is better)
Translates to: AGHQPHRRRAGPRHTSSHFTRSA*HELSTA
Trigger: CGCAGTGGACAGCTCGTGCCAAGCGGACCTCGTGAA...GTGAGAGCTGGTGTGGCGAGGCCCGGCTCTCCTGCGGTGTGGCTGGTGGCCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR CCA 90 bp GCCGGGCCTCGCCACACCAGCTCTCACTCCCGTGGTCGTGGGCCTCTCACCGCCTCGATGGTGGTGGAGTaGTCCGTCCTCTCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: AGPRHTSSHSRGRGPLTASMVVE*SVLSAE
Trigger: CTCTGCAGAGAGGACGGACCACTCCACCACCATCGA...GGCGGTGAGAGGCCCACGACCACGGGAGTGAGAGCTGGTGTGGCGAGGCCCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR CCA 90 bp CACAGGTCGGGCTGCTGTCCCCGCGCCTGTGGGGAAGAGCAGCCCTTCGGAGGGCATCGTTGGTCAGGCTaGAGCTGCTGGTGCTGGACG +
Preference number: 4 (lower is better)
Translates to: HRSGCCPRACGEEQPFGGHRWSG*SCWCWT
Trigger: CGTCCAGCACCAGCAGCTCCAGCCTGACCAACGATG...CCCTCCGAAGGGCTGCTCTTCCCCACAGGCGCGGGGACAGCAGCCCGACCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp ACGGCAGGCCACCAGCCACACCGCAGGAGAGCCGGGCCTCGCCACACCAGCTCTGCTTGGCCACATCGTTaGTCAGGCTGGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TAGHQPHRRRAGPRHTSSAWPHR*SGWSCW
Trigger: CCAGCAGCTCCAGCCTGACCAACGATGTGGCCAAGC...AGAGCTGGTGTGGCGAGGCCCGGCTCTCCTGCGGTGTGGCTGGTGGCCTGCCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp ACGGCAGGCCACCAGCCACACCGCAGGAGAGCCGGGCCTCGCCACACCAGCTCTGAGGTCGCATCAGCATaGGCGGCTCAAGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: TAGHQPHRRRAGPRHTSSEVASA*AAQGWR
Trigger: TCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCTC...AGAGCTGGTGTGGCGAGGCCCGGCTCTCCTGCGGTGTGGCTGGTGGCCTGCCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp GCAGGTTCACATCACTCTGGGGAGGAGGGCGGGGATACTCACGCTGTCCACTGCCCCACGACCCAGAGGTaGCTGCCGAGGCGGGCGCGT +
Preference number: 4 (lower is better)
Translates to: AGSHHSGEEGGDTHAVHCPTTQR*LPRRAR
Trigger: ACGCGCCCGCCTCGGCAGCCACCTCTGGGTCGTGGG...GCAGTGGACAGCGTGAGTATCCCCGCCCTCCTCCCCAGAGTGATGTGAACCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR TCA 90 bp GCCGAGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACCTTCAGGCCTCACGATaGCCCTGCTCTCGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: AEVASAWAAQGWRRGWCHLQASR*PCSRPP
Trigger: TGGAGGCCGAGAGCAGGGTCATCGTGAGGCCTGAAG...GTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCTCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR TCA 90 bp GCAGGCCACCAGCCACACCGCAGGAGAGCCGGGCCTCGCCACACCAGCTCTCACCAGTGCCTTCCTCGATaGTCGTCGGCAGCTGAGACA +
Preference number: 4 (lower is better)
Translates to: AGHQPHRRRAGPRHTSSHQCLPR*SSAAET
Trigger: TGTCTCAGCTGCCGACGATCATCGAGGAAGGCACTG...GTGAGAGCTGGTGTGGCGAGGCCCGGCTCTCCTGCGGTGTGGCTGGTGGCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp GACCCGGGCTGCTTTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTCGCTGCTGCTGGTGCTaGGGTTTCCGGGGGAGAACG +
Preference number: 4 (lower is better)
Translates to: DPGCFLGPDVGMGFVPEPRCCWC*GFRGRT
Trigger: CGTTCTCCCCCGGAAACCTCAGCACCAGCAGCAGCG...AGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAAAGCAGCCCGGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp CACAGGTCGGGCTGCTGTCCCCGCGCCTGTGGGGAAGAGCAGCCCTTCGGAGGGGATACTCCATGGCAGTaGCCCTCGTGTACCGAGGGT +
Preference number: 4 (lower is better)
Translates to: HRSGCCPRACGEEQPFGGDTPWQ*PSCTEG
Trigger: ACCCTCGGTACACGAGGGTCACTGCCATGGAGTATC...CCCTCCGAAGGGCTGCTCTTCCCCACAGGCGCGGGGACAGCAGCCCGACCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp CCCCGGCGAGTGACAGCTTCACTATGTACAGCAGGCGGCCGTGGCCTGGTGGGCCGTCTCCTGAGCTCATaGGGAGGCCGGTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: PRRVTASLCTAGGRGLVGRLLSS*GGRSPA
Trigger: AGCAGGAGACCGGCCTCCTCATGAGCTCAGGAGACG...GCCCACCAGGCCACGGCCGCCTGCTGTACATAGTGAAGCTGTCACTCGCCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp CGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCGGAAGGCCAGGCAGCTaGTGGCGCCGACCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: RNLLLVGARIPKRSSGGAGRPGS*WRRPAG
Trigger: GCCAGCGGGTCGGCGCCATCAGCTGCCTGGCCTTCC...GGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp GGAGGGGCCGCCTCTGTCCTGCCTTGTCACGTCCCGGCCAGCCCCAGCTCAGTCTGTGCTACACCTGTGTaGGGGCACAGGCATGGAGAC +
Preference number: 4 (lower is better)
Translates to: GGAASVLPCHVPASPSSVCATPV*GHRHGD
Trigger: GTCTCCATGCCTGTGCCCTCACACAGGTGTAGCACA...GACTGAGCTGGGGCTGGCCGGGACGTGACAAGGCAGGACAGAGGCGGCCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp GCGAGGCTGGAGAAAGGGCAGGCTGGAAACGCAGGGCTCGGCATCCCCAGAAGGAGCCACTCTCAGCCCTaGGGGTCCCGCACTCGTCTG +
Preference number: 4 (lower is better)
Translates to: ARLEKGQAGNAGLGIPRRSHSQP*GSRTRL
Trigger: CAGACGAGTGCGGGACCCGCAGGGCTGAGAGTGGCT...CCTTCTGGGGATGCCGAGCCCTGCGTTTCCAGCCTGCCCTTTCTCCAGCCTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR GCA 90 bp ACGGCAGGCCACCAGCCACACCGCAGGAGAGCCGGGCCTCGCCACACCAGCTCTGCTCCTCCTTGGCGTTaGGACGTAAGGACGTGCAGA +
Preference number: 4 (lower is better)
Translates to: TAGHQPHRRRAGPRHTSSAPPWR*DVRTCR
Trigger: TCTGCACGTCCTTACGTCGCAACGCCAAGGAGGAGC...AGAGCTGGTGTGGCGAGGCCCGGCTCTCCTGCGGTGTGGCTGGTGGCCTGCCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CACAGGTCGGGCTGCTGTCCCCGCGCCTGTGGGGAAGAGCAGCCCTTCGGAGGGGGTGGCCTCGCAGGCTaGCAGCTGGATGCAGTTTTT +
Preference number: 4 (lower is better)
Translates to: HRSGCCPRACGEEQPFGGGGLAG*QLDAVF
Trigger: AAAAACTGCATCCAGCTGGCAGCCTGCGAGGCCACC...CCCTCCGAAGGGCTGCTCTTCCCCACAGGCGCGGGGACAGCAGCCCGACCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp GGAGGGGCCGCCTCTGTCCTGCCTTGTCACGTCCCGGCCAGCCCCAGCTCAGTCGCACGAGCTGTCCACTaGGAGGATCTTGGCCCAGAT +
Preference number: 4 (lower is better)
Translates to: GGAASVLPCHVPASPSSVARAVH*EDLGPD
Trigger: ATCTGGGCCAAGATCCTCGCAGTGGACAGCTCGTGC...GACTGAGCTGGGGCTGGCCGGGACGTGACAAGGCAGGACAGAGGCGGCCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR GCA 90 bp CAAAAAGGAGCAGCGGAGGGGCCGCCTCTGTCCTGCCTTGTCACGTCCCGGCCACCCGCCTGGTGGATGTaGACGCCCTTGTTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: QKGAAEGPPLSCLVTSRPPAWWM*TPLLVG
Trigger: CCCCACCAACAAGGGCGTGCACATCCACCAGGCGGG...TGGCCGGGACGTGACAAGGCAGGACAGAGGCGGCCCCTCCGCTGCTCCTTTTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp GCCGAGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACGGGGAGGGTGGGCTGTaGGCTTCCTGCTCAGTGATG +
Preference number: 4 (lower is better)
Translates to: AEVASAWAAQGWRRGWCHGEGGL*ASCSVM
Trigger: CATCACTGAGCAGGAAGCGCACAGCCCACCCTCCCC...GTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCTCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCAGACCTGCCTCCCCTGTaGACCGCCACAGCGGCCCCT +
Preference number: 4 (lower is better)
Translates to: PRRGDGIRAGTFFWWELADLPPL*TATAAP
Trigger: AGGGGCCGCTGTGGCGGTGCACAGGGGAGGCAGGTC...TGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CCCGGCAGTGCCTCTTGCCTGTATGTGAGGAACGTGTGGGGACAGAGCAGGGAGGACCACAGGTCGGGCTaGTGTCCCCGCGCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: PGSASCLYVRNVWGQSREDHRSG*CPRACG
Trigger: CCCACAGGCGCGGGGACAGCAGCCCGACCTGTGGTC...CTCCCTGCTCTGTCCCCACACGTTCCTCACATACAGGCAAGAGGCACTGCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp TTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCAGGCGGCACGCGGTaGCCATGGGGGTGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: FSAQTWGWDSCRNLLLVGAGGTR*PWGWAP
Trigger: TGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGC...TCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp ATGGTGAGCCACACCTGGAATGCGGTCAGCTGCTCGGCGAAGAACGGGCTGTGCCAGGTCCGCGCGGCCTaGCTGGTCCTGGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: MVSHTWNAVSCSAKNGLCQVRAA*LVLAFS
Trigger: GCTGAAGGCCAGGACCAGCCAGGCCGCGCGGACCTG...GCACAGCCCGTTCTTCGCCGAGCAGCTGACCGCATTCCAGGTGTGGCTCACCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CCA 90 bp GCTCCGTGCAATTCCATGACATCACAGTGCCACGGAGGGCGGGGGAGCACGGCAGCCCACTGGGCCGACTaGGCTGAGGTCTCCGGCCAA +
Preference number: 4 (lower is better)
Translates to: APCNSMTSQCHGGRGSTAAHWAD*AEVSGQ
Trigger: TTGGCCGGAGACCTCAGCCCAGTCGGCCCAGTGGGC...TGCCGTGCTCCCCCGCCCTCCGTGGCACTGTGATGTCATGGAATTGCACGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CCA 90 bp CAGAGCTGTGAGGCTTCAGCCGGCCGCTGCTCCCGTGCAGTCCTAAAAGGCCCTTGCCGGTTCGCCCACTaGGCCGACTGGGCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: QSCEASAGRCSRAVLKGPCRFAH*ADWAEV
Trigger: GACCTCAGCCCAGTCGGCCCAGTGGGCGAACCGGCA...AGGGCCTTTTAGGACTGCACGGGAGCAGCGGCCGGCTGAAGCCTCACAGCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CCA 90 bp GTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGGAGCGGGGGCGTCTGCAGGTCATATATaGACAGAGGGATGTACTGCG +
Preference number: 4 (lower is better)
Translates to: VQAARGAHGGGLQGGAGASAGHI*TEGCTA
Trigger: CGCAGTACATCCCTCTGTCCATATATGACCTGCAGA...CGCCCCCGCTCCACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp CCGTGGTCGTGGGCCTCTCACCGCCAGAATGAAGCCACCTGGCTCCTTCACCTCTGGGCAGCAGCTCGGTaGCCTCGCAGGCTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: PWSWASHRQNEATWLLHLWAAAR*PRRLPA
Trigger: AGCTGGCAGCCTGCGAGGCCACCGAGCTGCTGCCCA...GAGGTGAAGGAGCCAGGTGGCTTCATTCTGGCGGTGAGAGGCCCACGACCACGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp CCCCGGCGAGTGACAGCTTCACTATGTACAGCAGGCGGCCGTGGCCTGGTGGGCGGGCAGCTGTTCGGGTaGGTTTCGGTTCTCCACGCC +
Preference number: 4 (lower is better)
Translates to: PRRVTASLCTAGGRGLVGGQLFG*VSVLHA
Trigger: GGCGTGGAGAACCGAAACCCACCCGAACAGCTGCCC...GCCCACCAGGCCACGGCCGCCTGCTGTACATAGTGAAGCTGTCACTCGCCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp GCAGGCCACCAGCCACACCGCAGGAGAGCCGGGCCTCGCCACACCAGCTCTCACCTCAGCCGGTGCACTTaGCTTAACAGCACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: AGHQPHRRRAGPRHTSSHLSRCT*LNSTCR
Trigger: CCTGCAGGTGCTGTTAAGCCAAGTGCACCGGCTGAG...GTGAGAGCTGGTGTGGCGAGGCCCGGCTCTCCTGCGGTGTGGCTGGTGGCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp CACAGGTCGGGCTGCTGTCCCCGCGCCTGTGGGGAAGAGCAGCCCTTCGGAGGGTCACAGAACGAAGTCTaGGGGTGCACGGGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: HRSGCCPRACGEEQPFGGSQNEV*GCTGCL
Trigger: GAGACAGCCCGTGCACCCCCAGACTTCGTTCTGTGA...CCCTCCGAAGGGCTGCTCTTCCCCACAGGCGCGGGGACAGCAGCCCGACCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp CCCCGGCGAGTGACAGCTTCACTATGTACAGCAGGCGGCCGTGGCCTGGTGGGCTGTCGTAGACGCGGATaGAGCCGTCACCGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: PRRVTASLCTAGGRGLVGCRRRG*SRHRGQ
Trigger: CTGGCCTCGGTGACGGCTCCATCCGCGTCTACGACA...GCCCACCAGGCCACGGCCGCCTGCTGTACATAGTGAAGCTGTCACTCGCCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp AGACAGCCCACGTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGTATGTGAGGAACGTGTaGGGACAGAGCAGGGAGACC +
Preference number: 4 (lower is better)
Translates to: RQPTCRRHAVPMGVGSRVYVRNV*GQSRET
Trigger: GGTCTCCCTGCTCTGTCCCCACACGTTCCTCACATA...CACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCACGTGGGCTGTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp GCAGGCCACCAGCCACACCGCAGGAGAGCCGGGCCTCGCCACACCAGCTCTCACAGGCTCTCTCCTGCCTaGGAACGAGTCCTGAGAAAC +
Preference number: 4 (lower is better)
Translates to: AGHQPHRRRAGPRHTSSHRLSPA*ERVLRN
Trigger: GTTTCTCAGGACTCGTTCTCAGGCAGGAGAGAGCCT...GTGAGAGCTGGTGTGGCGAGGCCCGGCTCTCCTGCGGTGTGGCTGGTGGCCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR TCA 90 bp AGCTCCGTGCAATTCCATGACATCACAGTGCCACGGAGGGCGGGGGAGCACGGCGGTCCCGCACTCGTCTaGGCTGCTGCAACCAGAGCC +
Preference number: 4 (lower is better)
Translates to: SSVQFHDITVPRRAGEHGGPALV*AAATRA
Trigger: GGCTCTGGTTGCAGCAGCTCAGACGAGTGCGGGACC...GCCGTGCTCCCCCGCCCTCCGTGGCACTGTGATGTCATGGAATTGCACGGAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR TCA 90 bp CACACCTGGAATGCGGTCAGCTGCTCGGCGAAGAACGGGCTGTGCCGAAACGCACTGGGCCGACTGGGCTaGGGTCTCCGGCCAAGGGAT +
Preference number: 4 (lower is better)
Translates to: HTWNAVSCSAKNGLCRNALGRLG*GLRPRD
Trigger: ATCCCTTGGCCGGAGACCTCAGCCCAGTCGGCCCAG...TGCGTTTCGGCACAGCCCGTTCTTCGCCGAGCAGCTGACCGCATTCCAGGTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR TCA 90 bp AGACAGCCCACGTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGCGCCAGGCACCAGACTaGCACATTTCTGCATGCAAA +
Preference number: 4 (lower is better)
Translates to: RQPTCRRHAVPMGVGSRVRQAPD*HISACK
Trigger: TTTGCATGCAGAAATGTGTCAGTCTGGTGCCTGGCG...CACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCACGTGGGCTGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp GACCCGGGCTGCTTTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTGCAGACGCGGGCTGCTaGCGGGAGTGCAGTTATACG +
Preference number: 4 (lower is better)
Translates to: DPGCFLGPDVGMGFVPEPADAGC*RECSYT
Trigger: CGTATAACTGCACTCCCGTCAGCAGCCCGCGTCTGC...AGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAAAGCAGCCCGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp CACAGGTCGGGCTGCTGTCCCCGCGCCTGTGGGGAAGAGCAGCCCTTCGGAGGGGGATCTTGGCCCAGATaGAAACGAGAAGTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: HRSGCCPRACGEEQPFGGGSWPR*KREVAA
Trigger: TGCGGCCACTTCTCGTTTTCATCTGGGCCAAGATCC...CCCTCCGAAGGGCTGCTCTTCCCCACAGGCGCGGGGACAGCAGCCCGACCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp AGACAGCCCACGTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGTCTTTTCCTCTTCTATaGACTGCAGGGCCACGGTGC +
Preference number: 4 (lower is better)
Translates to: RQPTCRRHAVPMGVGSRVSFPLL*TAGPRC
Trigger: GCACCGTGGCCCTGCAGTTCATAGAAGAGGAAAAGA...CACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCACGTGGGCTGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp AGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACCCGGAAGGCAAGTCTCGGCTaGCCGGCTGCTTGGCCACAT +
Preference number: 4 (lower is better)
Translates to: RSHQHGRLKAGDGAGVTRKASLG*PAAWPH
Trigger: ATGTGGCCAAGCAGCCGGTCAGCCGAGACTTGCCTT...CCGGGTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp GGAGGGGCCGCCTCTGTCCTGCCTTGTCACGTCCCGGCCAGCCCCAGCTCAGTCCTCGTAATGCCCTTCTaGATGACTTGCTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GGAASVLPCHVPASPSSVLVMPF*MTCWAC
Trigger: GCAGGCCCAGCAAGTCATTCAGAAGGGCATTACGAG...GACTGAGCTGGGGCTGGCCGGGACGTGACAAGGCAGGACAGAGGCGGCCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp AGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACCCGGCGGCGATGCACGGCGTaGAGGGGTGGAATTTCACCA +
Preference number: 4 (lower is better)
Translates to: RSHQHGRLKAGDGAGVTRRRCTA*RGGISP
Trigger: TGGTGAAATTCCACCCCTTCACGCCGTGCATCGCCG...CCGGGTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp CCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCACGCTCGCTCTTGGCCTaGTGGGGACAGCTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: PRRGDGIRAGTFFWWELARSLLA*WGQLPQ
Trigger: CTGGGGCAGCTGTCCCCATCAGGCCAAGAGCGAGCG...TGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp GCAGGCCACCAGCCACACCGCAGGAGAGCCGGGCCTCGCCACACCAGCTCTCACGGGTCATGGGAGCTTTaGCCTCTGGTTTGGAGCTAC +
Preference number: 4 (lower is better)
Translates to: AGHQPHRRRAGPRHTSSHGSWEL*PLVWSY
Trigger: GTAGCTCCAAACCAGAGGGCAAAGCTCCCATGACCC...GTGAGAGCTGGTGTGGCGAGGCCCGGCTCTCCTGCGGTGTGGCTGGTGGCCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR GCA 90 bp GATCCAGTTCAGTTCACCCAGGGGCGTCCTCCTGTCGTTCAGGCGGCCAGGGATACGACCGGCCCATCGTaGTCGCCTGCACCCGGTTCC +
Preference number: 4 (lower is better)
Translates to: DPVQFTQGRPPVVQAARDTTGPS*SPAPGS
Trigger: GGAACCGGGTGCAGGCGAGCACGATGGGCCGGTCGT...ATCCCTGGCCGCCTGAACGACAGGAGGACGCCCCTGGGTGAACTGAACTGGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR GCA 90 bp CCCCGTGCCCCGGCGAGTGACAGCTTCACTATGTACAGCAGGCGGCCGTGGCCTGTTGGGTCAAGGCTCTaGTTGTACCGGGCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: PRAPASDSFTMYSRRPWPVGSRL*LYRALG
Trigger: GCCAAGGGCCCGGTACAAGCAGAGCCTTGACCCAAC...AGGCCACGGCCGCCTGCTGTACATAGTGAAGCTGTCACTCGCCGGGGCACGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CCCCGTGCCCCGGCGAGTGACAGCTTCACTATGTACAGCAGGCGGCCGTGGCCTAGTTCTGCCAGATCCTaGCGAGGCAGATGGCCACCC +
Preference number: 4 (lower is better)
Translates to: PRAPASDSFTMYSRRPWPSSARS*RGRWPP
Trigger: GGGTGGCCATCTGCCTCGGCAGGATCTGGCAGAACT...AGGCCACGGCCGCCTGCTGTACATAGTGAAGCTGTCACTCGCCGGGGCACGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR GCA 90 bp CCCCGGCGAGTGACAGCTTCACTATGTACAGCAGGCGGCCGTGGCCTGGTGGGCGCCGAGTCGAAGTTCTaGCAGATCCTGCCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PRRVTASLCTAGGRGLVGAESKF*QILPRQ
Trigger: CTGCCTCGGCAGGATCTGGCAGAACTTCGACTCGGC...GCCCACCAGGCCACGGCCGCCTGCTGTACATAGTGAAGCTGTCACTCGCCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR GCA 90 bp CCCCGTGCCCCGGCGAGTGACAGCTTCACTATGTACAGCAGGCGGCCGTGGCCTAACGAAGTCTGGGGGTaGACGGGCTGTCTCGCACTG +
Preference number: 4 (lower is better)
Translates to: PRAPASDSFTMYSRRPWPNEVWG*TGCLAL
Trigger: CAGTGCGAGACAGCCCGTGCACCCCCAGACTTCGTT...AGGCCACGGCCGCCTGCTGTACATAGTGAAGCTGTCACTCGCCGGGGCACGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp AGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACCCGGATGTCCGAGAGCCCCTaGCACGCGGTCACCATCTCT +
Preference number: 4 (lower is better)
Translates to: RSHQHGRLKAGDGAGVTRMSESP*HAVTIS
Trigger: AGAGATGGTGACCGCGTGGCAGGGGCTCTCGGACAT...CCGGGTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp AGACAGCCCACGTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGAGATGTAGTAGTCGTTaGTTCCCACGGCCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: RQPTCRRHAVPMGVGSRVRCSSR*FPRPGE
Trigger: CTCACCTGGCCGTGGGAAGCAACGACTACTACATCT...CACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCACGTGGGCTGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCCCGTGGCCGCGGGGGTaGACCTGGATGCTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: RNLLLVGARIPKRSSGGAPWPRG*TWMLVL
Trigger: GAGCACCAGCATCCAGGTGCACCCCCGCGGCCACGG...GGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCGACCACAGGTCGGGCTaGTGTCCCCGCGCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: RNLLLVGARIPKRSSGGADHRSG*CPRACG
Trigger: CCCACAGGCGCGGGGACAGCAGCCCGACCTGTGGTC...GGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp GACCCGGGCTGCTTTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTAGGTGCCGGCCGTGGTaGCATCTGCACATGCGTGTG +
Preference number: 4 (lower is better)
Translates to: DPGCFLGPDVGMGFVPEPRCRPW*HLHMRV
Trigger: CACACGCATGTGCAGATGGCACCACGGCCGGCACCT...AGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAAAGCAGCCCGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CCCCGTGCCCCGGCGAGTGACAGCTTCACTATGTACAGCAGGCGGCCGTGGCCTATGGGAAGCTGCGTGTaGGGGTGGAGCTGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: PRAPASDSFTMYSRRPWPMGSCV*GWSWAS
Trigger: AGAAGCCCAGCTCCACCCGCACACGCAGCTTCCCAT...AGGCCACGGCCGCCTGCTGTACATAGTGAAGCTGTCACTCGCCGGGGCACGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp CGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCCAGGTCCGCGCGGCCTaGCTGGTCCTGGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: RNLLLVGARIPKRSSGGAQVRAA*LVLAFS
Trigger: GCTGAAGGCCAGGACCAGCCAGGCCGCGCGGACCTG...GGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR CCA 90 bp GCGAGGCTGGAGAAAGGGCAGGCTGGAAACGCAGGGCTCGGCATCCCCAGAAGGGGGTGGGGGAGTCCTTaGCAGCAAGCGCTCGAGAAC +
Preference number: 4 (lower is better)
Translates to: ARLEKGQAGNAGLGIPRRGWGSP*QQALEN
Trigger: GTTCTCGAGCGCTTGCTGCCAAGGACTCCCCCACCC...CCTTCTGGGGATGCCGAGCCCTGCGTTTCCAGCCTGCCCTTTCTCCAGCCTCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CCA 90 bp GATCCAGTTCAGTTCACCCAGGGGCGTCCTCCTGTCGTTCAGGCGGCCAGGGATTGGGCAGCAGCTCGGTaGCCTCGCAGGCTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: DPVQFTQGRPPVVQAARDWAAAR*PRRLPA
Trigger: AGCTGGCAGCCTGCGAGGCCACCGAGCTGCTGCCCA...ATCCCTGGCCGCCTGAACGACAGGAGGACGCCCCTGGGTGAACTGAACTGGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CCA 90 bp GGCTTCAGCCGGCCGCTGCTCCCGTGCAGTCCTAAAAGGCCCTCCAAGGCTTCTGGAGGTCGGGGATCATaGGCAGCAGCTCGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: GFSRPLLPCSPKRPSKASGGRGS*AAARWP
Trigger: AGGCCACCGAGCTGCTGCCCATGATCCCCGACCTCC...AGAAGCCTTGGAGGGCCTTTTAGGACTGCACGGGAGCAGCGGCCGGCTGAAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CCA 90 bp CAAAAAGGAGCAGCGGAGGGGCCGCCTCTGTCCTGCCTTGTCACGTCCCGGCCACCCAGGCTTGCCACATaGCGTGCATGTACGTGGGCG +
Preference number: 4 (lower is better)
Translates to: QKGAAEGPPLSCLVTSRPPRLAT*RACTWA
Trigger: CGCCCACGTACATGCACGCCATGTGGCAAGCCTGGG...TGGCCGGGACGTGACAAGGCAGGACAGAGGCGGCCCCTCCGCTGCTCCTTTTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp GACCCGGGCTGCTTTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTGCACCTGCAGGACGATaGGCAGCTGTTCGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: DPGCFLGPDVGMGFVPEPAPAGR*AAVRVG
Trigger: ACCCACCCGAACAGCTGCCCATCGTCCTGCAGGTGC...AGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAAAGCAGCCCGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp CCCCGGCGAGTGACAGCTTCACTATGTACAGCAGGCGGCCGTGGCCTGGTGGGCCATCGTTGGTCAGGCTaGAGCTGCTGGTGCTGGACG +
Preference number: 4 (lower is better)
Translates to: PRRVTASLCTAGGRGLVGHRWSG*SCWCWT
Trigger: CGTCCAGCACCAGCAGCTCCAGCCTGACCAACGATG...GCCCACCAGGCCACGGCCGCCTGCTGTACATAGTGAAGCTGTCACTCGCCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGGGCGGCGGTGCCCATGGGGGTaGGCTCCAGGGTGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: LCSVCKTAHTRPAAPPGRRCPWG*APGWSG
Trigger: CCCGCTCCACCCTGGAGCCCACCCCCATGGGCACCG...CCGCCCAGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR CAA 72 bp TGTCACCCGGAGCCGTCCGGGACCCGGCAGTGCCTCTaGCCTGTATGTGAGGAACGTGTGGGGACAGAGCAG +
Preference number: 4 (lower is better)
Translates to: CHPEPSGTRQCL*PVCEERVGTEQ
Trigger: CTGCTCTGTCCCCACACGTTCCTCACATACAGGCAAGAGGCACTGCCGGGTCCCGGACGGCTCCGGGTGACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp GAGTTGCAGAGCTGTGAGGCTTCAGCCGGCCGCTGCTCCCGTGCAGTCCTAAAACTGGGCCGACTGGGCTaGGGTCTCCGGCCAAGGGAT +
Preference number: 4 (lower is better)
Translates to: ELQSCEASAGRCSRAVLKLGRLG*GLRPRD
Trigger: ATCCCTTGGCCGGAGACCTCAGCCCAGTCGGCCCAG...TTTTAGGACTGCACGGGAGCAGCGGCCGGCTGAAGCCTCACAGCTCTGCAACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR TCA 90 bp AGCTCCGTGCAATTCCATGACATCACAGTGCCACGGAGGGCGGGGGAGCACGGCCTTCAGGCCTCACGATaGCCCTGCTCTCGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: SSVQFHDITVPRRAGEHGLQASR*PCSRPP
Trigger: TGGAGGCCGAGAGCAGGGTCATCGTGAGGCCTGAAG...GCCGTGCTCCCCCGCCCTCCGTGGCACTGTGATGTCATGGAATTGCACGGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR TCA 90 bp AGCTCCGTGCAATTCCATGACATCACAGTGCCACGGAGGGCGGGGGAGCACGGCGCAGACGCGGGCTGCTaGCGGGAGTGCAGTTATACG +
Preference number: 4 (lower is better)
Translates to: SSVQFHDITVPRRAGEHGADAGC*RECSYT
Trigger: CGTATAACTGCACTCCCGTCAGCAGCCCGCGTCTGC...GCCGTGCTCCCCCGCCCTCCGTGGCACTGTGATGTCATGGAATTGCACGGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR TCA 90 bp GCCGGGCCTCGCCACACCAGCTCTCACTCCCGTGGTCGTGGGCCTCTCACCGCCATGATCGTCGGCAGCTaGGACAGACAGATGTCAACA +
Preference number: 4 (lower is better)
Translates to: AGPRHTSSHSRGRGPLTAMIVGS*DRQMST
Trigger: TGTTGACATCTGTCTGTCTCAGCTGCCGACGATCAT...GGCGGTGAGAGGCCCACGACCACGGGAGTGAGAGCTGGTGTGGCGAGGCCCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp CCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCAGCTGGGCCTGCCTCCTaGCACGGCTGTTTCGCAGGA +
Preference number: 4 (lower is better)
Translates to: PRRGDGIRAGTFFWWELAAGPAS*HGCFAG
Trigger: TCCTGCGAAACAGCCGTGTCAGGAGGCAGGCCCAGC...TGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp CCCCGGCGAGTGACAGCTTCACTATGTACAGCAGGCGGCCGTGGCCTGGTGGGCCTCTCACCGCCAGAATaGAGCCACCTGGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: PRRVTASLCTAGGRGLVGLSPPE*SHLAPS
Trigger: TGAAGGAGCCAGGTGGCTTCATTCTGGCGGTGAGAG...GCCCACCAGGCCACGGCCGCCTGCTGTACATAGTGAAGCTGTCACTCGCCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp CTCCCGAGTTGCAGAGCTGTGAGGCTTCAGCCGGCCGCTGCTCCCGTGCAGTCCGCACCTGGAGGATCCTaGAACACTCACCACATGGCG +
Preference number: 4 (lower is better)
Translates to: LPSCRAVRLQPAAAPVQSAPGGS*NTHHMA
Trigger: CGCCATGTGGTGAGTGTTTCAGGATCCTCCAGGTGC...GGACTGCACGGGAGCAGCGGCCGGCTGAAGCCTCACAGCTCTGCAACTCGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR GCA 90 bp TTCAGCCGGCCGCTGCTCCCGTGCAGTCCTAAAAGGCCCTCCAAGGCTTCTGCCCCCATCGTGCTCGCCTaGACCCGGTTCCTCAACCTC +
Preference number: 4 (lower is better)
Translates to: FSRPLLPCSPKRPSKASAPIVLA*TRFLNL
Trigger: GAGGTTGAGGAACCGGGTGCAGGCGAGCACGATGGG...GGCAGAAGCCTTGGAGGGCCTTTTAGGACTGCACGGGAGCAGCGGCCGGCTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR GCA 90 bp TACCCTCCCGAGTTGCAGAGCTGTGAGGCTTCAGCCGGCCGCTGCTCCCGTGCACGCACTCGTCTGAGCTaGTGCAACCAGAGCCACGAC +
Preference number: 4 (lower is better)
Translates to: YPPELQSCEASAGRCSRARTRLS*CNQSHD
Trigger: GTCGTGGCTCTGGTTGCAGCAGCTCAGACGAGTGCG...TGCACGGGAGCAGCGGCCGGCTGAAGCCTCACAGCTCTGCAACTCGGGAGGGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR GCA 90 bp ACGGCAGGCCACCAGCCACACCGCAGGAGAGCCGGGCCTCGCCACACCAGCTCTCCCAGAAGAGGCGATTaGAGCATTTCGGACTCCATC +
Preference number: 4 (lower is better)
Translates to: TAGHQPHRRRAGPRHTSSPRRGD*SISDSI
Trigger: GATGGAGTCCGAAATGCTGCAATCGCCTCTTCTGGG...AGAGCTGGTGTGGCGAGGCCCGGCTCTCCTGCGGTGTGGCTGGTGGCCTGCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp ACGGCAGGCCACCAGCCACACCGCAGGAGAGCCGGGCCTCGCCACACCAGCTCTAATGCTCTCAGCCGGTaGACTTGGCTTAACAGCACC +
Preference number: 4 (lower is better)
Translates to: TAGHQPHRRRAGPRHTSSNALSR*TWLNST
Trigger: GGTGCTGTTAAGCCAAGTGCACCGGCTGAGAGCATT...AGAGCTGGTGTGGCGAGGCCCGGCTCTCCTGCGGTGTGGCTGGTGGCCTGCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp GGAGGGGCCGCCTCTGTCCTGCCTTGTCACGTCCCGGCCAGCCCCAGCTCAGTCAATGCTCTCAGCCGGTaGACTTGGCTTAACAGCACC +
Preference number: 4 (lower is better)
Translates to: GGAASVLPCHVPASPSSVNALSR*TWLNST
Trigger: GGTGCTGTTAAGCCAAGTGCACCGGCTGAGAGCATT...GACTGAGCTGGGGCTGGCCGGGACGTGACAAGGCAGGACAGAGGCGGCCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp ACGGCAGGCCACCAGCCACACCGCAGGAGAGCCGGGCCTCGCCACACCAGCTCTTCCAAGCAAGTCCAATaGTCTCAGCCGGTGCACTTG +
Preference number: 4 (lower is better)
Translates to: TAGHQPHRRRAGPRHTSSSKQVQ*SQPVHL
Trigger: CAAGTGCACCGGCTGAGAGCATTGGACTTGCTTGGA...AGAGCTGGTGTGGCGAGGCCCGGCTCTCCTGCGGTGTGGCTGGTGGCCTGCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CAAAAAGGAGCAGCGGAGGGGCCGCCTCTGTCCTGCCTTGTCACGTCCCGGCCAGCACGTAGGGGAAGATaGCGACAGACAAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: QKGAAEGPPLSCLVTSRPARRGR*RQTRPG
Trigger: GCCTGGCCTTGTCTGTCGGCATCTTCCCCTACGTGC...TGGCCGGGACGTGACAAGGCAGGACAGAGGCGGCCCCTCCGCTGCTCCTTTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp GCAGGGCTCGGCATCCCCAGAAGGGCCGGCAGGTTCACATCACTCTGGGGAGGAGCACGTAGGGGAAGATaGCGACAGACAAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: AGLGIPRRAGRFTSLWGGARRGR*RQTRPG
Trigger: GCCTGGCCTTGTCTGTCGGCATCTTCCCCTACGTGC...TCCTCCCCAGAGTGATGTGAACCTGCCGGCCCTTCTGGGGATGCCGAGCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR GCA 90 bp CCCCGGCGAGTGACAGCTTCACTATGTACAGCAGGCGGCCGTGGCCTGGTGGGCGTGGTCCGTCCTCTCTaGAGAGTTGCCCACGAACGT +
Preference number: 4 (lower is better)
Translates to: PRRVTASLCTAGGRGLVGVVRPL*RVAHER
Trigger: ACGTTCGTGGGCAACTCTGCAGAGAGGACGGACCAC...GCCCACCAGGCCACGGCCGCCTGCTGTACATAGTGAAGCTGTCACTCGCCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR GCA 90 bp ACCACAGGCCCAGCTGTCAGCCGAGGTCGCATCAGCATGGGCGGCTCAAGGCTGAACGAAGTCTGGGGGTaGACGGGCTGTCTCGCACTG +
Preference number: 4 (lower is better)
Translates to: TTGPAVSRGRISMGGSRLNEVWG*TGCLAL
Trigger: CAGTGCGAGACAGCCCGTGCACCCCCAGACTTCGTT...CAGCCTTGAGCCGCCCATGCTGATGCGACCTCGGCTGACAGCTGGGCCTGTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCCCTCATTCTCGGGGCTaGCCAGGGTGCTGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: RNLLLVGARIPKRSSGGAPHSRG*PGCCWR
Trigger: GCGCCAGCAGCACCCTGGGCAGCCCCGAGAATGAGG...GGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp ACGGCAGGCCACCAGCCACACCGCAGGAGAGCCGGGCCTCGCCACACCAGCTCTTCGAAGGACAGGATATaGTCCTCATTCTCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: TAGHQPHRRRAGPRHTSSSKDRI*SSFSGL
Trigger: CAGCCCCGAGAATGAGGAGCATATCCTGTCCTTCGA...AGAGCTGGTGTGGCGAGGCCCGGCTCTCCTGCGGTGTGGCTGGTGGCCTGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CCCCAGCTGGCTAGGAAATGTCCCTGCTTGCGTGCACTGACTGTGAGAGGTGGTCTGGCGGGGGCCGACTaGGTGAGGGAGGAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: PQLARKCPCLRALTVRGGLAGAD*VREEVS
Trigger: GGACACCTCCTCCCTCACGCAGTCGGCCCCCGCCAG...ACCACCTCTCACAGTCAGTGCACGCAAGCAGGGACATTTCCTAGCCAGCTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp GACCCGGGCTGCTTTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTCGTCACACAGCTGTCTaGGCCCGTAGGGATGTCCTG +
Preference number: 4 (lower is better)
Translates to: DPGCFLGPDVGMGFVPEPRHTAV*ARRDVL
Trigger: CAGGACATCCCTACGGGCGCAGACAGCTGTGTGACG...AGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAAAGCAGCCCGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp GACCCGGGCTGCTTTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTGCACCTGGATGCTGGTaGTCAGTGGGAAGCCACCGT +
Preference number: 4 (lower is better)
Translates to: DPGCFLGPDVGMGFVPEPAPGCW*SVGSHR
Trigger: ACGGTGGCTTCCCACTGAGCACCAGCATCCAGGTGC...AGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAAAGCAGCCCGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CCCCAGCTGGCTAGGAAATGTCCCTGCTTGCGTGCACTGACTGTGAGAGGTGGTAGGAGCCCCAGCGCCTaGCTCTCCGCCAGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: PQLARKCPCLRALTVRGGRSPSA*LSARAL
Trigger: CAGAGCCCTGGCGGAGAGGCAGGCGCTGGGGCTCCT...ACCACCTCTCACAGTCAGTGCACGCAAGCAGGGACATTTCCTAGCCAGCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp ACCACAGGCCCAGCTGTCAGCCGAGGTCGCATCAGCATGGGCGGCTCAAGGCTGTCCGGGACCCGGCAGTaGCTCTTGCCTGTATGTGAG +
Preference number: 4 (lower is better)
Translates to: TTGPAVSRGRISMGGSRLSGTRQ*LLPVCE
Trigger: CTCACATACAGGCAAGAGGCACTGCCGGGTCCCGGA...CAGCCTTGAGCCGCCCATGCTGATGCGACCTCGGCTGACAGCTGGGCCTGTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CAAAAAGGAGCAGCGGAGGGGCCGCCTCTGTCCTGCCTTGTCACGTCCCGGCCACATCCACCCAGAAGATaGTCTTGGCCACGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: QKGAAEGPPLSCLVTSRPHPPRR*SWPRQA
Trigger: GGCCTGCCGTGGCCAAGAGCATCTTCTGGGTGGATG...TGGCCGGGACGTGACAAGGCAGGACAGAGGCGGCCCCTCCGCTGCTCCTTTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CGCAGCAGCCGACGCCCCGTGCCCCGGCGAGTGACAGCTTCACTATGTACAGCAGGAAGATTCTGGTGTTaGCGCCTGGCACGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: RSSRRPVPRRVTASLCTAGRFWC*RLARPV
Trigger: CACAGGGCGTGCCAGGCGGCAACACCAGAATCTTCC...TGCTGTACATAGTGAAGCTGTCACTCGCCGGGGCACGGGGCGTCGGCTGCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp ACCACAGGCCCAGCTGTCAGCCGAGGTCGCATCAGCATGGGCGGCTCAAGGCTGATGGGAAGCTGCGTGTaGGGGTGGAGCTGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: TTGPAVSRGRISMGGSRLMGSCV*GWSWAS
Trigger: AGAAGCCCAGCTCCACCCGCACACGCAGCTTCCCAT...CAGCCTTGAGCCGCCCATGCTGATGCGACCTCGGCTGACAGCTGGGCCTGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGGGTCCGCGCGGCCTGGCTaGTCCTGGCCTTCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: WLCSVCKTAHTRPAAPPGSARPG*SWPSAP
Trigger: CGGGGCTGAAGGCCAGGACCAGCCAGGCCGCGCGGA...CCCAGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR CCA 90 bp AGGGCTCGGCATCCCCAGAAGGGCCGGCAGGTTCACATCACTCTGGGGAGGAGGGGGTTCAAAGGGCCCTaGGTCTCCTCCAGCCACTCT +
Preference number: 4 (lower is better)
Translates to: RARHPQKGRQVHITLGRRGFKGP*VSSSHS
Trigger: AGAGTGGCTGGAGGAGACCCAGGGCCCTTTGAACCC...CCTCCTCCCCAGAGTGATGTGAACCTGCCGGCCCTTCTGGGGATGCCGAGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CCA 90 bp CTGTTCGGGTGGGTTTCGGTTCTCCACGCCCATGGTGAGCCACACCTGGAATGCGCCCACTGGGCCGACTaGGCTGAGGTCTCCGGCCAA +
Preference number: 4 (lower is better)
Translates to: LFGWVSVLHAHGEPHLECAHWAD*AEVSGQ
Trigger: TTGGCCGGAGACCTCAGCCCAGTCGGCCCAGTGGGC...GCATTCCAGGTGTGGCTCACCATGGGCGTGGAGAACCGAAACCCACCCGAACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CCA 90 bp GCTTCAGCCGGCCGCTGCTCCCGTGCAGTCCTAAAAGGCCCTCCAAGGCTTCTGGGGTGGGGGAGTCCTTaGCAGCAAGCGCTCGAGAAC +
Preference number: 4 (lower is better)
Translates to: ASAGRCSRAVLKGPPRLLGWGSP*QQALEN
Trigger: GTTCTCGAGCGCTTGCTGCCAAGGACTCCCCCACCC...CAGAAGCCTTGGAGGGCCTTTTAGGACTGCACGGGAGCAGCGGCCGGCTGAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CCA 90 bp GACCCGGGCTGCTTTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTAGCGTGCACAGGGCGTaGTCTTCACCACATCGGGAG +
Preference number: 4 (lower is better)
Translates to: DPGCFLGPDVGMGFVPEPSVHRA*SSPHRE
Trigger: CTCCCGATGTGGTGAAGACCACGCCCTGTGCACGCT...AGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAAAGCAGCCCGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp ATGTACGTGGGCGGCAGACGCGGGCTGCTGACGGGAGTGCAGTTATACGACCTCGGAGGTCGGGGATCATaGGCAGCAGCTCGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: MYVGGRRGLLTGVQLYDLGGRGS*AAARWP
Trigger: AGGCCACCGAGCTGCTGCCCATGATCCCCGACCTCC...GAGGTCGTATAACTGCACTCCCGTCAGCAGCCCGCGTCTGCCGCCCACGTACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CCA 90 bp GCCGGCAGGTTCACATCACTCTGGGGAGGAGGGCGGGGATACTCACGCTGTCCAGGGCAGCTGTTCGGGTaGGTTTCGGTTCTCCACGCC +
Preference number: 4 (lower is better)
Translates to: AGRFTSLWGGGRGYSRCPGQLFG*VSVLHA
Trigger: GGCGTGGAGAACCGAAACCCACCCGAACAGCTGCCC...TGGACAGCGTGAGTATCCCCGCCCTCCTCCCCAGAGTGATGTGAACCTGCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CCA 90 bp GGCTGGAGAAAGGGCAGGCTGGAAACGCAGGGCTCGGCATCCCCAGAAGGGCCGGATGAAAACGAGAAGTaGCCGCAGCTCTCGGGCCGA +
Preference number: 4 (lower is better)
Translates to: GWRKGRLETQGSASPEGPDENEK*PQLSGR
Trigger: TCGGCCCGAGAGCTGCGGCCACTTCTCGTTTTCATC...CGGCCCTTCTGGGGATGCCGAGCCCTGCGTTTCCAGCCTGCCCTTTCTCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CCA 90 bp GCAGGCCACCAGCCACACCGCAGGAGAGCCGGGCCTCGCCACACCAGCTCTCACTCCCTCTGTGGTTGCTaGAGAAGGCAAGGCGTAGTT +
Preference number: 4 (lower is better)
Translates to: AGHQPHRRRAGPRHTSSHSLCGC*RRQGVV
Trigger: AACTACGCCTTGCCTTCTCCAGCAACCACAGAGGGA...GTGAGAGCTGGTGTGGCGAGGCCCGGCTCTCCTGCGGTGTGGCTGGTGGCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp CGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCAGGTCCGCCTGGGGGTaGATGTCCAGGGCCGTCAGC +
Preference number: 4 (lower is better)
Translates to: RNLLLVGARIPKRSSGGARSAWG*MSRAVS
Trigger: GCTGACGGCCCTGGACATCCACCCCCAGGCGGACCT...GGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TCCAGACACGACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTGCCGTGGCTGGAGACGGGGCTaGTGTCACCCGGAGCCGTCC +
Preference number: 4 (lower is better)
Translates to: SRHDSEDRQKRVAGPSCRGWRRG*CHPEPS
Trigger: GGACGGCTCCGGGTGACACCAGCCCCGTCTCCAGCC...ACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTCGTGTCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp GACCCGGGCTGCTTTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTGAGGTCGCATCAGCATaGGCGGCTCAAGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: DPGCFLGPDVGMGFVPEPEVASA*AAQGWR
Trigger: TCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCTC...AGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAAAGCAGCCCGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp GACCCGGGCTGCTTTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTGCCCAGACGTGGGGATaGGATTCGTGCCGGAACCTT +
Preference number: 4 (lower is better)
Translates to: DPGCFLGPDVGMGFVPEPAQTWG*DSCRNL
Trigger: AAGGTTCCGGCACGAATCCCATCCCCACGTCTGGGC...AGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAAAGCAGCCCGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp ACCACAGGCCCAGCTGTCAGCCGAGGTCGCATCAGCATGGGCGGCTCAAGGCTGAGCTGCGTGTGCGGGTaGAGCTGGGCTTCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: TTGPAVSRGRISMGGSRLSCVCG*SWASGR
Trigger: TCTTCCAGAAGCCCAGCTCCACCCGCACACGCAGCT...CAGCCTTGAGCCGCCCATGCTGATGCGACCTCGGCTGACAGCTGGGCCTGTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp GGAGGGGCCGCCTCTGTCCTGCCTTGTCACGTCCCGGCCAGCCCCAGCTCAGTCGGTTTGGAGCTACAGTaGAACTCATCTCATCAGCCC +
Preference number: 4 (lower is better)
Translates to: GGAASVLPCHVPASPSSVGLELQ*NSSHQP
Trigger: GGGCTGATGAGATGAGTTTCACTGTAGCTCCAAACC...GACTGAGCTGGGGCTGGCCGGGACGTGACAAGGCAGGACAGAGGCGGCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR TCA 90 bp CATCACAGTGCCACGGAGGGCGGGGGAGCACGGCACCTGGAGGATCCTGAAACAGCCACTGGCTGCTCCTaGGGCTGTACGTTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: HHSATEGGGARHLEDPETATGCS*GCTFPE
Trigger: CTCTGGAAACGTACAGCCTCAGGAGCAGCCAGTGGC...TGTTTCAGGATCCTCCAGGTGCCGTGCTCCCCCGCCCTCCGTGGCACTGTGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR TCA 90 bp GGAGGGGCCGCCTCTGTCCTGCCTTGTCACGTCCCGGCCAGCCCCAGCTCAGTCTTCATCCTCCAGCTCTaGGCTAAGGATTTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: GGAASVLPCHVPASPSSVFILQL*AKDLEP
Trigger: AGGCTCCAAATCCTTAGCTCAGAGCTGGAGGATGAA...GACTGAGCTGGGGCTGGCCGGGACGTGACAAGGCAGGACAGAGGCGGCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp GCAGGGCTCGGCATCCCCAGAAGGGCCGGCAGGTTCACATCACTCTGGGGAGGACAGTGCCTTCCTCGATaGTCGTCGGCAGCTGAGACA +
Preference number: 4 (lower is better)
Translates to: AGLGIPRRAGRFTSLWGGQCLPR*SSAAET
Trigger: TGTCTCAGCTGCCGACGATCATCGAGGAAGGCACTG...TCCTCCCCAGAGTGATGTGAACCTGCCGGCCCTTCTGGGGATGCCGAGCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR TCA 90 bp CCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCATCTCCACGCCCATGGTaGGCCACACCTGGAATGCGG +
Preference number: 4 (lower is better)
Translates to: PRRGDGIRAGTFFWWELASPRPW*ATPGMR
Trigger: CCGCATTCCAGGTGTGGCTCACCATGGGCGTGGAGA...TGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp CGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCAGGGGTGCGGGTCGTTaGGCTGCTCCAGGCAGATGG +
Preference number: 4 (lower is better)
Translates to: RNLLLVGARIPKRSSGGARGAGR*AAPGRW
Trigger: CCATCTGCCTGGAGCAGCTCAACGACCCGCACCCCT...GGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR TCA 90 bp ACGGCAGGCCACCAGCCACACCGCAGGAGAGCCGGGCCTCGCCACACCAGCTCTAGCCCCTTCACGATCTaGAGCACATTTACCGACTCA +
Preference number: 4 (lower is better)
Translates to: TAGHQPHRRRAGPRHTSSSPFTI*STFTDS
Trigger: TGAGTCGGTAAATGTGCTTCAGATCGTGAAGGGGCT...AGAGCTGGTGTGGCGAGGCCCGGCTCTCCTGCGGTGTGGCTGGTGGCCTGCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp GAGCAGCCCTTCGGAGGGAAAGGAGCCCCGTGGATTAAGGCAGGGGCTACCTCGCCGTGCCCCGGCGAGTaGCAGCTTCACTATGTACAG +
Preference number: 4 (lower is better)
Translates to: EQPFGGKGAPWIKAGATSPCPGE*QLHYVQ
Trigger: CTGTACATAGTGAAGCTGTCACTCGCCGGGGCACGG...CGAGGTAGCCCCTGCCTTAATCCACGGGGCTCCTTTCCCTCCGAAGGGCTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp GACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTGCCGTCATCAGCAGCGCTCGCTCTTGGCCTaGTGGGGACAGCTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: DSEDRQKRVAGPSCRHQQRSLLA*WGQLPQ
Trigger: CTGGGGCAGCTGTCCCCATCAGGCCAAGAGCGAGCG...CTGCTGATGACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp TTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGACACAGCGGCCCCTGCTaGCAGCTCTGTGTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: FSAQTWGWDSCRNLLLVGHSGPC*QLCVRG
Trigger: CCCTCTCACACAGAGCTGTCAGCAGGGGCCGCTGTG...TCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp GCCGAGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACCCTCTTGCCTGTATGTaGGGAACGTGTGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: AEVASAWAAQGWRRGWCHPLACM*GTCGDR
Trigger: TCTGTCCCCACACGTTCCTCACATACAGGCAAGAGG...GTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCTCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp CAAAAAGGAGCAGCGGAGGGGCCGCCTCTGTCCTGCCTTGTCACGTCCCGGCCAGTCTCTGGCCAAATGTaGCCAGGCAGGGTTCCATCC +
Preference number: 4 (lower is better)
Translates to: QKGAAEGPPLSCLVTSRPVSGQM*PGRVPS
Trigger: GGATGGAACCCTGCCTGGTCACATTTGGCCAGAGAC...TGGCCGGGACGTGACAAGGCAGGACAGAGGCGGCCCCTCCGCTGCTCCTTTTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp CACAGGTCGGGCTGCTGTCCCCGCGCCTGTGGGGAAGAGCAGCCCTTCGGAGGGGAGCCACCTGCCTTTTaGCAGGTGGTGATTTTGTCT +
Preference number: 4 (lower is better)
Translates to: HRSGCCPRACGEEQPFGGEPPAF*QVVILS
Trigger: AGACAAAATCACCACCTGTCAAAAGGCAGGTGGCTC...CCCTCCGAAGGGCTGCTCTTCCCCACAGGCGCGGGGACAGCAGCCCGACCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CCGTGGTCGTGGGCCTCTCACCGCCAGAATGAAGCCACCTGGCTCCTTCACCTCCCCGAGGCTCTCTCCTaGCTGAGAACGAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: PWSWASHRQNEATWLLHLPEALS*LRTSPE
Trigger: CTCAGGACTCGTTCTCAGGCAGGAGAGAGCCTCGGG...GAGGTGAAGGAGCCAGGTGGCTTCATTCTGGCGGTGAGAGGCCCACGACCACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR GCA 90 bp GCCTTCCTCGATGATCGTCGGCAGCTGAGACAGACAGATGTCAACAGCCAGGTCGCAGGCCGCTCTTGGTaGCGGTTCGCCCACTGGGCC +
Preference number: 4 (lower is better)
Translates to: AFLDDRRQLRQTDVNSQVAGRSW*RFAHWA
Trigger: GGCCCAGTGGGCGAACCGGCACCAAGAGCGGCCTGC...GACCTGGCTGTTGACATCTGTCTGTCTCAGCTGCCGACGATCATCGAGGAAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR GCA 90 bp GCAGGCCACCAGCCACACCGCAGGAGAGCCGGGCCTCGCCACACCAGCTCTCACCTGCCCATCCACGTCTaGAGGTCATATATGGACAGA +
Preference number: 4 (lower is better)
Translates to: AGHQPHRRRAGPRHTSSHLPIHV*RSYMDR
Trigger: TCTGTCCATATATGACCTGCAGACGTGGATGGGCAG...GTGAGAGCTGGTGTGGCGAGGCCCGGCTCTCCTGCGGTGTGGCTGGTGGCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CCGTGGTCGTGGGCCTCTCACCGCCAGAATGAAGCCACCTGGCTCCTTCACCTCGCTACCTCCAGCTCCTaGTCCCGCTGTAGTGCGAAC +
Preference number: 4 (lower is better)
Translates to: PWSWASHRQNEATWLLHLATSSS*SRCSAN
Trigger: GTTCGCACTACAGCGGGAGCAGGAGCTGGAGGTAGC...GAGGTGAAGGAGCCAGGTGGCTTCATTCTGGCGGTGAGAGGCCCACGACCACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp TCGGTTCTCCACGCCCATGGTGAGCCACACCTGGAATGCGGTCAGCTGCTCGGCGCTTGCCACATGGCGTaGATGTACGTGGGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: SVLHAHGEPHLECGQLLGACHMA*MYVGGR
Trigger: TCTGCCGCCCACGTACATGCACGCCATGTGGCAAGC...GCCGAGCAGCTGACCGCATTCCAGGTGTGGCTCACCATGGGCGTGGAGAACCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR GCA 90 bp CCGTGGTCGTGGGCCTCTCACCGCCAGAATGAAGCCACCTGGCTCCTTCACCTCTGGAATGCGGTCAGCTaGTCGGCGAAGAACGGGCTG +
Preference number: 4 (lower is better)
Translates to: PWSWASHRQNEATWLLHLWNAVS*SAKNGL
Trigger: CAGCCCGTTCTTCGCCGAGCAGCTGACCGCATTCCA...GAGGTGAAGGAGCCAGGTGGCTTCATTCTGGCGGTGAGAGGCCCACGACCACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCCCCGCCTGGTGGATGTaGACGCCCTTGTTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: RNLLLVGARIPKRSSGGAPAWWM*TPLLVG
Trigger: CCCCACCAACAAGGGCGTGCACATCCACCAGGCGGG...GGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp GAGCAGCCCTTCGGAGGGAAAGGAGCCCCGTGGATTAAGGCAGGGGCTACCTCGATGTCCGAGAGCCCCTaGCACGCGGTCACCATCTCT +
Preference number: 4 (lower is better)
Translates to: EQPFGGKGAPWIKAGATSMSESP*HAVTIS
Trigger: AGAGATGGTGACCGCGTGGCAGGGGCTCTCGGACAT...CGAGGTAGCCCCTGCCTTAATCCACGGGGCTCCTTTCCCTCCGAAGGGCTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp AGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACCCGGGCGGCATTCGCTGAGTaGCATCCTTCTGTCGTAGAC +
Preference number: 4 (lower is better)
Translates to: RSHQHGRLKAGDGAGVTRAAFAE*HPSVVD
Trigger: GTCTACGACAGAAGGATGGCACTCAGCGAATGCCGC...CCGGGTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp ACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCGCCTACCTCGCCAAGGACCTaGCTCCCCTGTGCACCGCCA +
Preference number: 4 (lower is better)
Translates to: TFFWWELAFQKGAAEGPPTSPRT*LPCAPP
Trigger: TGGCGGTGCACAGGGGAGGCAGGTCCTTGGCGAGGT...AGGCGGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp TCCAGACACGACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTGCCGTGTGTGTGCCCCCAGGTaGCGGCCGTGGTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: SRHDSEDRQKRVAGPSCRVCAPR*RPWCHL
Trigger: CAGATGGCACCACGGCCGGCACCTGGGGGCACACAC...ACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTCGTGTCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CACAGGTCGGGCTGCTGTCCCCGCGCCTGTGGGGAAGAGCAGCCCTTCGGAGGGTTCTGTTTGCAAAACTaGTCATACACGCCCTGCGGC +
Preference number: 4 (lower is better)
Translates to: HRSGCCPRACGEEQPFGGFCLQN*SYTPCG
Trigger: GCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAA...CCCTCCGAAGGGCTGCTCTTCCCCACAGGCGCGGGGACAGCAGCCCGACCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCCTTCCGGACCCGGGCTaGTTTCTCGGCCCAGACGTG +
Preference number: 4 (lower is better)
Translates to: RNLLLVGARIPKRSSGGALPDPG*FLGPDV
Trigger: CACGTCTGGGCCGAGAAAGCAGCCCGGGTCCGGAAG...GGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp GCTTCAGCCGGCCGCTGCTCCCGTGCAGTCCTAAAAGGCCCTCCAAGGCTTCTGGCTTCAGCCGGCCGCTaGTCCCGTGCAGTCCTAAAA +
Preference number: 4 (lower is better)
Translates to: ASAGRCSRAVLKGPPRLLASAGR*SRAVLK
Trigger: TTTTAGGACTGCACGGGAGCAGCGGCCGGCTGAAGC...CAGAAGCCTTGGAGGGCCTTTTAGGACTGCACGGGAGCAGCGGCCGGCTGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CCA 90 bp CTTGACGATCAAGCCAGCATTGGAGCAGTCGTAGACGAAGATCGACGGGCTGCCCGGCCTGGCTGGTCCTaGCCTTCAGCCCCGAGGCTC +
Preference number: 4 (lower is better)
Translates to: LDDQASIGAVVDEDRRAARPGWS*PSAPRL
Trigger: GAGCCTCGGGGCTGAAGGCCAGGACCAGCCAGGCCG...GGCAGCCCGTCGATCTTCGTCTACGACTGCTCCAATGCTGGCTTGATCGTCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CCA 90 bp AGTTCACCCAGGGGCGTCCTCCTGTCGTTCAGGCGGCCAGGGATCTTTTCTATCTGCCGGTTCGCCCACTaGGCCGACTGGGCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: SSPRGVLLSFRRPGIFSICRFAH*ADWAEV
Trigger: GACCTCAGCCCAGTCGGCCCAGTGGGCGAACCGGCA...GATAGAAAAGATCCCTGGCCGCCTGAACGACAGGAGGACGCCCCTGGGTGAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CCA 90 bp CATCACAGTGCCACGGAGGGCGGGGGAGCACGGCACCTGGAGGATCCTGAAACAAGCGTGCACAGGGCGTaGTCTTCACCACATCGGGAG +
Preference number: 4 (lower is better)
Translates to: HHSATEGGGARHLEDPETSVHRA*SSPHRE
Trigger: CTCCCGATGTGGTGAAGACCACGCCCTGTGCACGCT...TGTTTCAGGATCCTCCAGGTGCCGTGCTCCCCCGCCCTCCGTGGCACTGTGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CCA 90 bp CAGAGCTGTGAGGCTTCAGCCGGCCGCTGCTCCCGTGCAGTCCTAAAAGGCCCTGGACTCGCTCCTCCTTaGCGTTGCGACGTAAGGACG +
Preference number: 4 (lower is better)
Translates to: QSCEASAGRCSRAVLKGPGLAPP*RCDVRT
Trigger: CGTCCTTACGTCGCAACGCCAAGGAGGAGCGAGTCC...AGGGCCTTTTAGGACTGCACGGGAGCAGCGGCCGGCTGAAGCCTCACAGCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CCA 90 bp ACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCGCCTGGAGGTCGGGGATCATaGGCAGCAGCTCGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: TFFWWELAFQKGAAEGPPGGRGS*AAARWP
Trigger: AGGCCACCGAGCTGCTGCCCATGATCCCCGACCTCC...AGGCGGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp ACGCTGTCCACTGCGAGGATCTTGGCCCAGATGAAAACGAGAAGTGGCCGCAGCTGGCGTGCATGTACGTaGGCGGCAGACGCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TLSTARILAQMKTRSGRSWRACT*AADAGC
Trigger: GCAGCCCGCGTCTGCCGCCCACGTACATGCACGCCA...GCTGCGGCCACTTCTCGTTTTCATCTGGGCCAAGATCCTCGCAGTGGACAGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CCA 90 bp CTGGAAACGCAGGGCTCGGCATCCCCAGAAGGGCCGGCAGGTTCACATCACTCTCCCAGGCTTGCCACATaGCGTGCATGTACGTGGGCG +
Preference number: 4 (lower is better)
Translates to: LETQGSASPEGPAGSHHSPRLAT*RACTWA
Trigger: CGCCCACGTACATGCACGCCATGTGGCAAGCCTGGG...AGAGTGATGTGAACCTGCCGGCCCTTCTGGGGATGCCGAGCCCTGCGTTTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CCA 90 bp ACCACAGGCCCAGCTGTCAGCCGAGGTCGCATCAGCATGGGCGGCTCAAGGCTGATGGTGAGCCACACCTaGAATGCGGTCAGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: TTGPAVSRGRISMGGSRLMVSHT*NAVSCS
Trigger: CGAGCAGCTGACCGCATTCCAGGTGTGGCTCACCAT...CAGCCTTGAGCCGCCCATGCTGATGCGACCTCGGCTGACAGCTGGGCCTGTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp ACCACAGGCCCAGCTGTCAGCCGAGGTCGCATCAGCATGGGCGGCTCAAGGCTGTCACAGAACGAAGTCTaGGGGTGCACGGGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: TTGPAVSRGRISMGGSRLSQNEV*GCTGCL
Trigger: GAGACAGCCCGTGCACCCCCAGACTTCGTTCTGTGA...CAGCCTTGAGCCGCCCATGCTGATGCGACCTCGGCTGACAGCTGGGCCTGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp ACGGCAGGCCACCAGCCACACCGCAGGAGAGCCGGGCCTCGCCACACCAGCTCTGGCGCATCTTGTCGATaGTCTCGAAGGACAGGATAT +
Preference number: 4 (lower is better)
Translates to: TAGHQPHRRRAGPRHTSSGASCR*SRRTGY
Trigger: ATATCCTGTCCTTCGAGACCATCGACAAGATGCGCC...AGAGCTGGTGTGGCGAGGCCCGGCTCTCCTGCGGTGTGGCTGGTGGCCTGCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp CACAGGTCGGGCTGCTGTCCCCGCGCCTGTGGGGAAGAGCAGCCCTTCGGAGGGCGCGGTCACCATCTCTaGGTTCTTTTCCAAATCAGC +
Preference number: 4 (lower is better)
Translates to: HRSGCCPRACGEEQPFGGRGHHL*VLFQIS
Trigger: GCTGATTTGGAAAAGAACCCAGAGATGGTGACCGCG...CCCTCCGAAGGGCTGCTCTTCCCCACAGGCGCGGGGACAGCAGCCCGACCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp GACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTGCCGTCATCAGCAGAGGTCCGCCTGGGGGTaGATGTCCAGGGCCGTCAGC +
Preference number: 4 (lower is better)
Translates to: DSEDRQKRVAGPSCRHQQRSAWG*MSRAVS
Trigger: GCTGACGGCCCTGGACATCCACCCCCAGGCGGACCT...CTGCTGATGACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp CCCCAGCTGGCTAGGAAATGTCCCTGCTTGCGTGCACTGACTGTGAGAGGTGGTGCGATCAGGTCCGCCTaGGGGTGGATGTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PQLARKCPCLRALTVRGGAIRSA*GWMSRA
Trigger: GGCCCTGGACATCCACCCCCAGGCGGACCTGATCGC...ACCACCTCTCACAGTCAGTGCACGCAAGCAGGGACATTTCCTAGCCAGCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TCCAGACACGACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTGCCGTCCGCGGGGGTGCACCTaGATGCTGGTGCTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: SRHDSEDRQKRVAGPSCRPRGCT*MLVLSG
Trigger: CCCACTGAGCACCAGCATCCAGGTGCACCCCCGCGG...ACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTCGTGTCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp ACCACAGGCCCAGCTGTCAGCCGAGGTCGCATCAGCATGGGCGGCTCAAGGCTGTTCACACCCGCCAGTTaGAGGGGCGTCTCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: TTGPAVSRGRISMGGSRLFTPAS*RGVSFF
Trigger: GAAGAAGGAGACGCCCCTCCAACTGGCGGGTGTGAA...CAGCCTTGAGCCGCCCATGCTGATGCGACCTCGGCTGACAGCTGGGCCTGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TCCAGACACGACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTGCCGTCTGTCCCCGCGCCTGTaGGGAAGAGCAGCCCTTCGG +
Preference number: 4 (lower is better)
Translates to: SRHDSEDRQKRVAGPSCRLSPRL*GRAALR
Trigger: CCGAAGGGCTGCTCTTCCCCACAGGCGCGGGGACAG...ACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTCGTGTCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp GCAGGCCACCAGCCACACCGCAGGAGAGCCGGGCCTCGCCACACCAGCTCTCACATTGAGTTGAAGGACTaGATGGGAAGCTGCGTGTGC +
Preference number: 4 (lower is better)
Translates to: AGHQPHRRRAGPRHTSSHIELKD*MGSCVC
Trigger: GCACACGCAGCTTCCCATCCAGTCCTTCAACTCAAT...GTGAGAGCTGGTGTGGCGAGGCCCGGCTCTCCTGCGGTGTGGCTGGTGGCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp GAGCAGCCCTTCGGAGGGAAAGGAGCCCCGTGGATTAAGGCAGGGGCTACCTCGCCTGAGAACGAGTCCTaGGAAACGGGCGACACGGAA +
Preference number: 4 (lower is better)
Translates to: EQPFGGKGAPWIKAGATSPENES*ETGDTE
Trigger: TTCCGTGTCGCCCGTTTCTCAGGACTCGTTCTCAGG...CGAGGTAGCCCCTGCCTTAATCCACGGGGCTCCTTTCCCTCCGAAGGGCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR TCA 90 bp TCCAGACACGACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTGCCGTGGTCCCGCACTCGTCTaGGCTGCTGCAACCAGAGCC +
Preference number: 4 (lower is better)
Translates to: SRHDSEDRQKRVAGPSCRGPALV*AAATRA
Trigger: GGCTCTGGTTGCAGCAGCTCAGACGAGTGCGGGACC...ACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTCGTGTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR TCA 90 bp TGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGGGCTGGGCCGACTGGGCTaGGGTCTCCGGCCAAGGGAT +
Preference number: 4 (lower is better)
Translates to: WLCSVCKTAHTRPAAPPGLGRLG*GLRPRD
Trigger: ATCCCTTGGCCGGAGACCTCAGCCCAGTCGGCCCAG...CCCAGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR TCA 90 bp GATCCAGTTCAGTTCACCCAGGGGCGTCCTCCTGTCGTTCAGGCGGCCAGGGATGCCACTGGCTGCTCCTaGGGCTGTACGTTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: DPVQFTQGRPPVVQAARDATGCS*GCTFPE
Trigger: CTCTGGAAACGTACAGCCTCAGGAGCAGCCAGTGGC...ATCCCTGGCCGCCTGAACGACAGGAGGACGCCCCTGGGTGAACTGAACTGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR TCA 90 bp CTCCCGAGTTGCAGAGCTGTGAGGCTTCAGCCGGCCGCTGCTCCCGTGCAGTCCGTTTCCAGAGCTTTCTaGGGACCCATCGACAGAGGA +
Preference number: 4 (lower is better)
Translates to: LPSCRAVRLQPAAAPVQSVSRAF*GPIDRG
Trigger: TCCTCTGTCGATGGGTCCTCAGAAAGCTCTGGAAAC...GGACTGCACGGGAGCAGCGGCCGGCTGAAGCCTCACAGCTCTGCAACTCGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR TCA 90 bp CTCCCGAGTTGCAGAGCTGTGAGGCTTCAGCCGGCCGCTGCTCCCGTGCAGTCCCGCCAGGCACCAGACTaGCACATTTCTGCATGCAAA +
Preference number: 4 (lower is better)
Translates to: LPSCRAVRLQPAAAPVQSRQAPD*HISACK
Trigger: TTTGCATGCAGAAATGTGTCAGTCTGGTGCCTGGCG...GGACTGCACGGGAGCAGCGGCCGGCTGAAGCCTCACAGCTCTGCAACTCGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR TCA 90 bp CGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCGCAGACGCGGGCTGCTaGCGGGAGTGCAGTTATACG +
Preference number: 4 (lower is better)
Translates to: RNLLLVGARIPKRSSGGAADAGC*RECSYT
Trigger: CGTATAACTGCACTCCCGTCAGCAGCCCGCGTCTGC...GGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp AACAGCACCTGCAGGACGATGGGCAGCTGTTCGGGTGGGTTTCGGTTCTCCACGGCAGACGCGGGCTGCTaGCGGGAGTGCAGTTATACG +
Preference number: 4 (lower is better)
Translates to: NSTCRTMGSCSGGFRFSTADAGC*RECSYT
Trigger: CGTATAACTGCACTCCCGTCAGCAGCCCGCGTCTGC...CGTGGAGAACCGAAACCCACCCGAACAGCTGCCCATCGTCCTGCAGGTGCTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR TCA 90 bp GCCAGGTCCCAGGCTTGCCACATGGCGTGCATGTACGTGGGCGGCAGACGCGGGATGATCGTCGGCAGCTaGGACAGACAGATGTCAACA +
Preference number: 4 (lower is better)
Translates to: ARSQACHMACMYVGGRRGMIVGS*DRQMST
Trigger: TGTTGACATCTGTCTGTCTCAGCTGCCGACGATCAT...CCCGCGTCTGCCGCCCACGTACATGCACGCCATGTGGCAAGCCTGGGACCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR TCA 90 bp CGTGTAGTTCTTGTTGAAGACCCAGACCTCCCCGTTGACTGTGGGCCGGGGCACTCTCCACGCCCATGGTaGGCCACACCTGGAATGCGG +
Preference number: 4 (lower is better)
Translates to: RVVLVEDPDLPVDCGPGHSPRPW*ATPGMR
Trigger: CCGCATTCCAGGTGTGGCTCACCATGGGCGTGGAGA...GTGCCCCGGCCCACAGTCAACGGGGAGGTCTGGGTCTTCAACAAGAACTACACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR TCA 90 bp GAGCAGCCCTTCGGAGGGAAAGGAGCCCCGTGGATTAAGGCAGGGGCTACCTCGCCAGGCAGATGGCAATaGGGTTTCCCTGAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: EQPFGGKGAPWIKAGATSPGRWQ*GFPEGR
Trigger: CCTGCCTTCAGGGAAACCTCATTGCCATCTGCCTGG...CGAGGTAGCCCCTGCCTTAATCCACGGGGCTCCTTTCCCTCCGAAGGGCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR TCA 90 bp CCCGGCAGTGCCTCTTGCCTGTATGTGAGGAACGTGTGGGGACAGAGCAGGGAGCGCTCCTTGCGGATCTaGCTCTCCAGGTCGTGCTCT +
Preference number: 4 (lower is better)
Translates to: PGSASCLYVRNVWGQSRERSLRI*LSRSCS
Trigger: AGAGCACGACCTGGAGAGTCAGATCCGCAAGGAGCG...CTCCCTGCTCTGTCCCCACACGTTCCTCACATACAGGCAAGAGGCACTGCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp ACCACAGGCCCAGCTGTCAGCCGAGGTCGCATCAGCATGGGCGGCTCAAGGCTGCTCGTAATGCCCTTCTaGATGACTTGCTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: TTGPAVSRGRISMGGSRLLVMPF*MTCWAC
Trigger: GCAGGCCCAGCAAGTCATTCAGAAGGGCATTACGAG...CAGCCTTGAGCCGCCCATGCTGATGCGACCTCGGCTGACAGCTGGGCCTGTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp TTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGACGAGGCCAGCCACGATaGGTGAGCGGTGGGAATCAC +
Preference number: 4 (lower is better)
Translates to: FSAQTWGWDSCRNLLLVGRGQPR*VSGGNH
Trigger: GTGATTCCCACCGCTCACTCATCGTGGCTGGCCTCG...TCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp TTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGGGCGGCACAGCGGCCCCTGCTaGCAGCTCTGTGTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: LCSVCKTAHTRPAAPPGRHSGPC*QLCVRG
Trigger: CCCTCTCACACAGAGCTGTCAGCAGGGGCCGCTGTG...CCGCCCAGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp GACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTGCCGTCATCAGCAGGCACGCCCTGTGAGCTaGGTGAGGCCGGGACTCTCT +
Preference number: 4 (lower is better)
Translates to: DSEDRQKRVAGPSCRHQQARPVS*VRPGLS
Trigger: AGAGAGTCCCGGCCTCACTCAGCTCACAGGGCGTGC...CTGCTGATGACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CTGTTCGGGTGGGTTTCGGTTCTCCACGCCCATGGTGAGCCACACCTGGAATGCCCCATCGTGCTCGCCTaGACCCGGTTCCTCAACCTC +
Preference number: 4 (lower is better)
Translates to: LFGWVSVLHAHGEPHLECPIVLA*TRFLNL
Trigger: GAGGTTGAGGAACCGGGTGCAGGCGAGCACGATGGG...GCATTCCAGGTGTGGCTCACCATGGGCGTGGAGAACCGAAACCCACCCGAACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR GCA 90 bp CCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCAACTCGTCTGAGCTGCTaGAACCAGAGCCACGACCGG +
Preference number: 4 (lower is better)
Translates to: PRRGDGIRAGTFFWWELATRLSC*NQSHDR
Trigger: CCGGTCGTGGCTCTGGTTGCAGCAGCTCAGACGAGT...TGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR GCA 90 bp CTGGAAACGCAGGGCTCGGCATCCCCAGAAGGGCCGGCAGGTTCACATCACTCTACTCGTCTGAGCTGCTaGAACCAGAGCCACGACCGG +
Preference number: 4 (lower is better)
Translates to: LETQGSASPEGPAGSHHSTRLSC*NQSHDR
Trigger: CCGGTCGTGGCTCTGGTTGCAGCAGCTCAGACGAGT...AGAGTGATGTGAACCTGCCGGCCCTTCTGGGGATGCCGAGCCCTGCGTTTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR GCA 90 bp CCGTGGTCGTGGGCCTCTCACCGCCAGAATGAAGCCACCTGGCTCCTTCACCTCGGTGGCCTCGCAGGCTaGCAGCTGGATGCAGTTTTT +
Preference number: 4 (lower is better)
Translates to: PWSWASHRQNEATWLLHLGGLAG*QLDAVF
Trigger: AAAAACTGCATCCAGCTGGCAGCCTGCGAGGCCACC...GAGGTGAAGGAGCCAGGTGGCTTCATTCTGGCGGTGAGAGGCCCACGACCACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp AGCTCCGTGCAATTCCATGACATCACAGTGCCACGGAGGGCGGGGGAGCACGGCGGTGGCCTCGCAGGCTaGCAGCTGGATGCAGTTTTT +
Preference number: 4 (lower is better)
Translates to: SSVQFHDITVPRRAGEHGGGLAG*QLDAVF
Trigger: AAAAACTGCATCCAGCTGGCAGCCTGCGAGGCCACC...GCCGTGCTCCCCCGCCCTCCGTGGCACTGTGATGTCATGGAATTGCACGGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR GCA 90 bp ACGGCAGGCCACCAGCCACACCGCAGGAGAGCCGGGCCTCGCCACACCAGCTCTAGACTGACACATTTCTaGATGCAAAACCAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: TAGHQPHRRRAGPRHTSSRLTHF*MQNQRR
Trigger: CCTGCGCTGGTTTTGCATGCAGAAATGTGTCAGTCT...AGAGCTGGTGTGGCGAGGCCCGGCTCTCCTGCGGTGTGGCTGGTGGCCTGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp GGTTCACATCACTCTGGGGAGGAGGGCGGGGATACTCACGCTGTCCACTGCGAGGAGCCACACCTGGAATaGGGTCAGCTGCTCGGCGAA +
Preference number: 4 (lower is better)
Translates to: GSHHSGEEGGDTHAVHCEEPHLE*GQLLGE
Trigger: TTCGCCGAGCAGCTGACCGCATTCCAGGTGTGGCTC...CTCGCAGTGGACAGCGTGAGTATCCCCGCCCTCCTCCCCAGAGTGATGTGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR GCA 90 bp CCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCAAGTTGCCCACGAACGTaGCAAGGGCGAAGACCGCTG +
Preference number: 4 (lower is better)
Translates to: PRRGDGIRAGTFFWWELASCPRT*QGRRPL
Trigger: CAGCGGTCTTCGCCCTTGGCACGTTCGTGGGCAACT...TGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR GCA 90 bp CACAGGTCGGGCTGCTGTCCCCGCGCCTGTGGGGAAGAGCAGCCCTTCGGAGGGACTGCAGGGCCACGGTaGAGAAATTGCTTTCATACT +
Preference number: 4 (lower is better)
Translates to: HRSGCCPRACGEEQPFGGTAGPR*RNCFHT
Trigger: AGTATGAAAGCAATTTCTGCACCGTGGCCCTGCAGT...CCCTCCGAAGGGCTGCTCTTCCCCACAGGCGCGGGGACAGCAGCCCGACCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CCCCGGCGAGTGACAGCTTCACTATGTACAGCAGGCGGCCGTGGCCTGGTGGGCAGTCCCAAAAGCAGATaGTGTCCTTGTCGGCTACGG +
Preference number: 4 (lower is better)
Translates to: PRRVTASLCTAGGRGLVGSPKSR*CPCRLR
Trigger: CCGTAGCCGACAAGGACAGCATCTGCTTTTGGGACT...GCCCACCAGGCCACGGCCGCCTGCTGTACATAGTGAAGCTGTCACTCGCCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCAGGAGGCCGGTCTCCTaGTCCCAGTCCACCACCATC +
Preference number: 4 (lower is better)
Translates to: RNLLLVGARIPKRSSGGARRPVS*SQSTTI
Trigger: GATGGTGGTGGACTGGGAGCAGGAGACCGGCCTCCT...GGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CGCAGCAGCCGACGCCCCGTGCCCCGGCGAGTGACAGCTTCACTATGTACAGCAGCGGCATTCGCTGAGTaGCATCCTTCTGTCGTAGAC +
Preference number: 4 (lower is better)
Translates to: RSSRRPVPRRVTASLCTAAAFAE*HPSVVD
Trigger: GTCTACGACAGAAGGATGGCACTCAGCGAATGCCGC...TGCTGTACATAGTGAAGCTGTCACTCGCCGGGGCACGGGGCGTCGGCTGCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CCCCAGCTGGCTAGGAAATGTCCCTGCTTGCGTGCACTGACTGTGAGAGGTGGTCCGTCGGGACGCTTCTaGAGGGAGGCCTTCACCACC +
Preference number: 4 (lower is better)
Translates to: PQLARKCPCLRALTVRGGPSGRF*REAFTT
Trigger: GGTGGTGAAGGCCTCCCTGCAGAAGCGTCCCGACGG...ACCACCTCTCACAGTCAGTGCACGCAAGCAGGGACATTTCCTAGCCAGCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CCCCGGCGAGTGACAGCTTCACTATGTACAGCAGGCGGCCGTGGCCTGGTGGGCAGATGTAGTAGTCGTTaGTTCCCACGGCCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: PRRVTASLCTAGGRGLVGRCSSR*FPRPGE
Trigger: CTCACCTGGCCGTGGGAAGCAACGACTACTACATCT...GCCCACCAGGCCACGGCCGCCTGCTGTACATAGTGAAGCTGTCACTCGCCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CCCCAGCTGGCTAGGAAATGTCCCTGCTTGCGTGCACTGACTGTGAGAGGTGGTAGCCAACGTTCACACTaGGGGGCCGCAGCAGCCGAC +
Preference number: 4 (lower is better)
Translates to: PQLARKCPCLRALTVRGGSQRSH*GAAAAD
Trigger: GTCGGCTGCTGCGGCCCCGCAGTGTGAACGTTGGCT...ACCACCTCTCACAGTCAGTGCACGCAAGCAGGGACATTTCCTAGCCAGCTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CCCGGCAGTGCCTCTTGCCTGTATGTGAGGAACGTGTGGGGACAGAGCAGGGAGGCACCTGGATGCTGGTaGTCAGTGGGAAGCCACCGT +
Preference number: 4 (lower is better)
Translates to: PGSASCLYVRNVWGQSREAPGCW*SVGSHR
Trigger: ACGGTGGCTTCCCACTGAGCACCAGCATCCAGGTGC...CTCCCTGCTCTGTCCCCACACGTTCCTCACATACAGGCAAGAGGCACTGCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCGGGGGTGCACCTGGATaGTGGTGCTCAGTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: RNLLLVGARIPKRSSGGAGGAPG*WCSVGS
Trigger: GCTTCCCACTGAGCACCAGCATCCAGGTGCACCCCC...GGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CCGTGGTCGTGGGCCTCTCACCGCCAGAATGAAGCCACCTGGCTCCTTCACCTCCCCGGCAGTGCCTCTTaGCTGTATGTGAGGAACGTG +
Preference number: 4 (lower is better)
Translates to: PWSWASHRQNEATWLLHLPGSAS*LYVRNV
Trigger: CACGTTCCTCACATACAGGCAAGAGGCACTGCCGGG...GAGGTGAAGGAGCCAGGTGGCTTCATTCTGGCGGTGAGAGGCCCACGACCACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp GCTCCGTGCAATTCCATGACATCACAGTGCCACGGAGGGCGGGGGAGCACGGCAACTCACCACATGGCGTaGATGTACGTGGGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: APCNSMTSQCHGGRGSTATHHMA*MYVGGR
Trigger: TCTGCCGCCCACGTACATGCACGCCATGTGGTGAGT...TGCCGTGCTCCCCCGCCCTCCGTGGCACTGTGATGTCATGGAATTGCACGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CCA 90 bp TTCACCCAGGGGCGTCCTCCTGTCGTTCAGGCGGCCAGGGATCTTTTCTATCAACAGGCAGGCCGCTCTTaGTGCCGGTTCGCCCACTGG +
Preference number: 4 (lower is better)
Translates to: FTQGRPPVVQAARDLFYQQAGRS*CRFAHW
Trigger: CCAGTGGGCGAACCGGCACCAAGAGCGGCCTGCCTG...TTGATAGAAAAGATCCCTGGCCGCCTGAACGACAGGAGGACGCCCCTGGGTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CCA 90 bp AACAGCACCTGCAGGACGATGGGCAGCTGTTCGGGTGGGTTTCGGTTCTCCACGGGGGCCGCTAGGAAATaGGGCAGCCCAAGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: NSTCRTMGSCSGGFRFSTGAARK*GSPRSS
Trigger: GGAGCTTCTTGGGCTGCCCCATTTCCTAGCGGCCCC...CGTGGAGAACCGAAACCCACCCGAACAGCTGCCCATCGTCCTGCAGGTGCTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CCA 90 bp CACAGGTCGGGCTGCTGTCCCCGCGCCTGTGGGGAAGAGCAGCCCTTCGGAGGGGACTTCATCCACAGTTaGGTCAAGGCTCTGCTTGTA +
Preference number: 4 (lower is better)
Translates to: HRSGCCPRACGEEQPFGGDFIHS*VKALLV
Trigger: TACAAGCAGAGCCTTGACCCAACTGTGGATGAAGTC...CCCTCCGAAGGGCTGCTCTTCCCCACAGGCGCGGGGACAGCAGCCCGACCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp CACAGGTCGGGCTGCTGTCCCCGCGCCTGTGGGGAAGAGCAGCCCTTCGGAGGGAGCAAGAGGGTGATTTaGGTTGATTGCAGCTACCTC +
Preference number: 4 (lower is better)
Translates to: HRSGCCPRACGEEQPFGGSKRVI*VDCSYL
Trigger: GAGGTAGCTGCAATCAACCCAAATCACCCTCTTGCT...CCCTCCGAAGGGCTGCTCTTCCCCACAGGCGCGGGGACAGCAGCCCGACCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGGGCGGGGAGGTCGGGGATCATaGGCAGCAGCTCGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: LCSVCKTAHTRPAAPPGRGGRGS*AAARWP
Trigger: AGGCCACCGAGCTGCTGCCCATGATCCCCGACCTCC...CCGCCCAGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TCCAGACACGACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTGCCGTTCCTGCCGAGGCAGATaGCCACCCACTGGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: SRHDSEDRQKRVAGPSCRSCRGR*PPTGAA
Trigger: TGCTGCGCCAGTGGGTGGCCATCTGCCTCGGCAGGA...ACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTCGTGTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR CCA 90 bp TTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGGGCGGCCGTCGCTGACCAGCTaGGCCAGCATCATGGCCACG +
Preference number: 4 (lower is better)
Translates to: LCSVCKTAHTRPAAPPGRPSLTS*ASIMAT
Trigger: CGTGGCCATGATGCTGGCCCAGCTGGTCAGCGACGG...CCGCCCAGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR CCA 90 bp TTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGACGGGCTGTCTCGCACTaGGGTCAAACTCCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: FSAQTWGWDSCRNLLLVGRAVSH*GQTPSL
Trigger: GAGGGAGGGAGTTTGACCCCAGTGCGAGACAGCCCG...TCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGGGAGGAGTAGGAGCTaGCGCGGCGCATCTTGTCGA +
Preference number: 4 (lower is better)
Translates to: FSAQTWGWDSCRNLLLVGGRSRS*RGASCR
Trigger: TCGACAAGATGCGCCGCGCCAGCTCCTACTCCTCCC...TCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp CCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCACACGTCCGAGACCTCTaGATAGGGGTCAGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: PRRGDGIRAGTFFWWELAHVRDL*IGVSSQ
Trigger: CTGGCTGCTGACCCCTATCCAGAGGTCTCGGACGTG...TGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAAGCTCCTCGCGTCGTTaGCAGCATGTCCGAGAGCCC +
Preference number: 4 (lower is better)
Translates to: FSAQTWGWDSCRNLLLVGSSSRR*QHVREP
Trigger: GGGCTCTCGGACATGCTGCCAACGACGCGAGGAGCT...TCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp CCCGGCAGTGCCTCTTGCCTGTATGTGAGGAACGTGTGGGGACAGAGCAGGGAGGGTGCACCTGGATGCTaGTGCTCAGTGGGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: PGSASCLYVRNVWGQSREGAPGC*CSVGSH
Trigger: GTGGCTTCCCACTGAGCACCAGCATCCAGGTGCACC...CTCCCTGCTCTGTCCCCACACGTTCCTCACATACAGGCAAGAGGCACTGCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp ACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCGCCTCCTCTCGCTCGCTCTTaGCCTGATGGGGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: TFFWWELAFQKGAAEGPPPLARS*PDGDSC
Trigger: GCAGCTGTCCCCATCAGGCCAAGAGCGAGCGAGAGG...AGGCGGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp GAGCAGCCCTTCGGAGGGAAAGGAGCCCCGTGGATTAAGGCAGGGGCTACCTCGCCAGTGTCCCCCAGCTaGCTAGGAAATGTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: EQPFGGKGAPWIKAGATSPVSPS*LGNVPA
Trigger: AGCAGGGACATTTCCTAGCCAGCTGGGGGACACTGG...CGAGGTAGCCCCTGCCTTAATCCACGGGGCTCCTTTCCCTCCGAAGGGCTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGGGCGGCAGCTCTCACTCCCGTaGTCGTGGGCCTCTCACCGC +
Preference number: 4 (lower is better)
Translates to: LCSVCKTAHTRPAAPPGRQLSLP*SWASHR
Trigger: GCGGTGAGAGGCCCACGACCACGGGAGTGAGAGCTG...CCGCCCAGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp GAGCAGCCCTTCGGAGGGAAAGGAGCCCCGTGGATTAAGGCAGGGGCTACCTCGGGCCAGGTGTGTCTCTaGCCAAATGTGACCAGGCAG +
Preference number: 4 (lower is better)
Translates to: EQPFGGKGAPWIKAGATSGQVCL*PNVTRQ
Trigger: CTGCCTGGTCACATTTGGCCAGAGACACACCTGGCC...CGAGGTAGCCCCTGCCTTAATCCACGGGGCTCCTTTCCCTCCGAAGGGCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR CAA 72 bp TCCAGTGTCCCCCAGCTGGCTAGGAAATGTCCCTGCTaGCGTGCACTGACTGTGAGAGGTGGTGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SSVPQLARKCPC*RALTVRGGGPG
Trigger: GCCAGGCCCACCACCTCTCACAGTCAGTGCACGCAAGCAGGGACATTTCCTAGCCAGCTGGGGGACACTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp GCCGGCAGGTTCACATCACTCTGGGGAGGAGGGCGGGGATACTCACGCTGTCCAAGGCTCTCTCCTGCCTaGGAACGAGTCCTGAGAAAC +
Preference number: 4 (lower is better)
Translates to: AGRFTSLWGGGRGYSRCPRLSPA*ERVLRN
Trigger: GTTTCTCAGGACTCGTTCTCAGGCAGGAGAGAGCCT...TGGACAGCGTGAGTATCCCCGCCCTCCTCCCCAGAGTGATGTGAACCTGCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR TCA 90 bp CGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCGCCACTGGCTGCTCCTaGGGCTGTACGTTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: RNLLLVGARIPKRSSGGAATGCS*GCTFPE
Trigger: CTCTGGAAACGTACAGCCTCAGGAGCAGCCAGTGGC...GGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR TCA 90 bp ACGGCAGGCCACCAGCCACACCGCAGGAGAGCCGGGCCTCGCCACACCAGCTCTAAACTAAGGCAACACTaGCTGTCTTCATCCGATCCT +
Preference number: 4 (lower is better)
Translates to: TAGHQPHRRRAGPRHTSSKLRQH*LSSSDP
Trigger: AGGATCGGATGAAGACAGTCAGTGTTGCCTTAGTTT...AGAGCTGGTGTGGCGAGGCCCGGCTCTCCTGCGGTGTGGCTGGTGGCCTGCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp GGAGGGGCCGCCTCTGTCCTGCCTTGTCACGTCCCGGCCAGCCCCAGCTCAGTCAAACTAAGGCAACACTaGCTGTCTTCATCCGATCCT +
Preference number: 4 (lower is better)
Translates to: GGAASVLPCHVPASPSSVKLRQH*LSSSDP
Trigger: AGGATCGGATGAAGACAGTCAGTGTTGCCTTAGTTT...GACTGAGCTGGGGCTGGCCGGGACGTGACAAGGCAGGACAGAGGCGGCCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp ACCACAGGCCCAGCTGTCAGCCGAGGTCGCATCAGCATGGGCGGCTCAAGGCTGGTTTCCAGAGCTTTCTaGGGACCCATCGACAGAGGA +
Preference number: 4 (lower is better)
Translates to: TTGPAVSRGRISMGGSRLVSRAF*GPIDRG
Trigger: TCCTCTGTCGATGGGTCCTCAGAAAGCTCTGGAAAC...CAGCCTTGAGCCGCCCATGCTGATGCGACCTCGGCTGACAGCTGGGCCTGTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp CCCCGTGCCCCGGCGAGTGACAGCTTCACTATGTACAGCAGGCGGCCGTGGCCTACGTGCAGAGCTTCTTaGCTTCATCCACAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: PRAPASDSFTMYSRRPWPTCRAS*LHPQLG
Trigger: ACCCAACTGTGGATGAAGTCAAGAAGCTCTGCACGT...AGGCCACGGCCGCCTGCTGTACATAGTGAAGCTGTCACTCGCCGGGGCACGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp GCGAGGCTGGAGAAAGGGCAGGCTGGAAACGCAGGGCTCGGCATCCCCAGAAGGCGCCAGGCACCAGACTaGCACATTTCTGCATGCAAA +
Preference number: 4 (lower is better)
Translates to: ARLEKGQAGNAGLGIPRRRQAPD*HISACK
Trigger: TTTGCATGCAGAAATGTGTCAGTCTGGTGCCTGGCG...CCTTCTGGGGATGCCGAGCCCTGCGTTTCCAGCCTGCCCTTTCTCCAGCCTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR TCA 90 bp GACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTGCCGTCATCAGCAGTCTCCACGCCCATGGTaGGCCACACCTGGAATGCGG +
Preference number: 4 (lower is better)
Translates to: DSEDRQKRVAGPSCRHQQSPRPW*ATPGMR
Trigger: CCGCATTCCAGGTGTGGCTCACCATGGGCGTGGAGA...CTGCTGATGACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp TCCAGACACGACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTGCCGTCGTCTCCTGAGCTCATaGGGAGGCCGGTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SRHDSEDRQKRVAGPSCRRLLSS*GGRSPA
Trigger: AGCAGGAGACCGGCCTCCTCATGAGCTCAGGAGACG...ACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTCGTGTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp TTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGGTCACGCCGCTATCTaGCACGCTTCTCCACCGAGT +
Preference number: 4 (lower is better)
Translates to: FSAQTWGWDSCRNLLLVGGHAAI*HASPPS
Trigger: ACTCGGTGGAGAAGCGTGTCAGATAGCGGCGTGACC...TCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp AGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACCCGGGAGCCACCTGCCTTTTaGCAGGTGGTGATTTTGTCT +
Preference number: 4 (lower is better)
Translates to: RSHQHGRLKAGDGAGVTREPPAF*QVVILS
Trigger: AGACAAAATCACCACCTGTCAAAAGGCAGGTGGCTC...CCGGGTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp CATCACAGTGCCACGGAGGGCGGGGGAGCACGGCACCTGGAGGATCCTGAAACACTCCGTGCAATTCCATaGCATCACAGTGCCACGGAG +
Preference number: 4 (lower is better)
Translates to: HHSATEGGGARHLEDPETLRAIP*HHSATE
Trigger: CTCCGTGGCACTGTGATGTCATGGAATTGCACGGAG...TGTTTCAGGATCCTCCAGGTGCCGTGCTCCCCCGCCCTCCGTGGCACTGTGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR GCA 90 bp CATGGGCAGCAGCTCGGTGGCCTCGCAGGCTGCCAGCTGGATGCAGTTTTTCATCGCACTCGTCTGAGCTaGTGCAACCAGAGCCACGAC +
Preference number: 4 (lower is better)
Translates to: HGQQLGGLAGCQLDAVFHRTRLS*CNQSHD
Trigger: GTCGTGGCTCTGGTTGCAGCAGCTCAGACGAGTGCG...ATGAAAAACTGCATCCAGCTGGCAGCCTGCGAGGCCACCGAGCTGCTGCCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR GCA 90 bp GAGTTGCAGAGCTGTGAGGCTTCAGCCGGCCGCTGCTCCCGTGCAGTCCTAAAAGTTGGGTCAAGGCTCTaGTTGTACCGGGCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: ELQSCEASAGRCSRAVLKVGSRL*LYRALG
Trigger: GCCAAGGGCCCGGTACAAGCAGAGCCTTGACCCAAC...TTTTAGGACTGCACGGGAGCAGCGGCCGGCTGAAGCCTCACAGCTCTGCAACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR GCA 90 bp GCCGAGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACCTGCCCATCCACGTCTaGAGGTCATATATGGACAGA +
Preference number: 4 (lower is better)
Translates to: AEVASAWAAQGWRRGWCHLPIHV*RSYMDR
Trigger: TCTGTCCATATATGACCTGCAGACGTGGATGGGCAG...GTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCTCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp TTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGACGAAGATCGACGGGCTaGCCATCCACGTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: FSAQTWGWDSCRNLLLVGRRSTG*PSTSAG
Trigger: ACCTGCAGACGTGGATGGGCAGCCCGTCGATCTTCG...TCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp AGCAGCTCGGTGGCCTCGCAGGCTGCCAGCTGGATGCAGTTTTTCATCGACGGACGAAGATCGACGGGCTaGCCATCCACGTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: SSSVASQAASWMQFFIDGRRSTG*PSTSAG
Trigger: ACCTGCAGACGTGGATGGGCAGCCCGTCGATCTTCG...TCCGTCGATGAAAAACTGCATCCAGCTGGCAGCCTGCGAGGCCACCGAGCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR GCA 90 bp TTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGAGCCACACCTGGAATaGGGTCAGCTGCTCGGCGAA +
Preference number: 4 (lower is better)
Translates to: FSAQTWGWDSCRNLLLVGEPHLE*GQLLGE
Trigger: TTCGCCGAGCAGCTGACCGCATTCCAGGTGTGGCTC...TCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CCCCAGCTGGCTAGGAAATGTCCCTGCTTGCGTGCACTGACTGTGAGAGGTGGTAAGGGCGAAGACCGCTaGGCAGCGGACCTCGGGAAT +
Preference number: 4 (lower is better)
Translates to: PQLARKCPCLRALTVRGGKGEDR*AADLGN
Trigger: ATTCCCGAGGTCCGCTGCGCAGCGGTCTTCGCCCTT...ACCACCTCTCACAGTCAGTGCACGCAAGCAGGGACATTTCCTAGCCAGCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR GCA 90 bp GACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTGCCGTCATCAGCAGAGGAGGCCGGTCTCCTaGTCCCAGTCCACCACCATC +
Preference number: 4 (lower is better)
Translates to: DSEDRQKRVAGPSCRHQQRRPVS*SQSTTI
Trigger: GATGGTGGTGGACTGGGAGCAGGAGACCGGCCTCCT...CTGCTGATGACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp TTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGACGTCACACAGCTGTCTaGGCCCGTAGGGATGTCCTG +
Preference number: 4 (lower is better)
Translates to: FSAQTWGWDSCRNLLLVGRHTAV*ARRDVL
Trigger: CAGGACATCCCTACGGGCGCAGACAGCTGTGTGACG...TCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCGTAGCAGGGCCCTCCTaGCGTCATCAGCAGCTAAGG +
Preference number: 4 (lower is better)
Translates to: RNLLLVGARIPKRSSGGAVAGPS*RHQQLR
Trigger: CCTTAGCTGCTGATGACGGCAGGAGGGCCCTGCTAC...GGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp GACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTGCCGTCATCAGCAGGGGCTGTGCGCTTCCTaGTCAGTGATGCTGCCAGCG +
Preference number: 4 (lower is better)
Translates to: DSEDRQKRVAGPSCRHQQGLCAS*SVMLPA
Trigger: CGCTGGCAGCATCACTGAGCAGGAAGCGCACAGCCC...CTGCTGATGACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp TCCAGACACGACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTGCCGTGGGCTGTGCGCTTCCTaGTCAGTGATGCTGCCAGCG +
Preference number: 4 (lower is better)
Translates to: SRHDSEDRQKRVAGPSCRGLCAS*SVMLPA
Trigger: CGCTGGCAGCATCACTGAGCAGGAAGCGCACAGCCC...ACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTCGTGTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp ACCACAGGCCCAGCTGTCAGCCGAGGTCGCATCAGCATGGGCGGCTCAAGGCTGATCTGCACATGCGTGTaGTACACCTGTGTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: TTGPAVSRGRISMGGSRLICTCV*YTCVRA
Trigger: TGCCCTCACACAGGTGTAGCACACGCATGTGCAGAT...CAGCCTTGAGCCGCCCATGCTGATGCGACCTCGGCTGACAGCTGGGCCTGTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp ACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCGCCTGGCCGTGGTGCCATCTaGACATGCGTGTGCTACACC +
Preference number: 4 (lower is better)
Translates to: TFFWWELAFQKGAAEGPPGRGAI*TCVCYT
Trigger: GGTGTAGCACACGCATGTGCAGATGGCACCACGGCC...AGGCGGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp TCCAGACACGACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTGCCGTAGGTGCCGGCCGTGGTaGCATCTGCACATGCGTGTG +
Preference number: 4 (lower is better)
Translates to: SRHDSEDRQKRVAGPSCRRCRPW*HLHMRV
Trigger: CACACGCATGTGCAGATGGCACCACGGCCGGCACCT...ACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTCGTGTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp GCCAGGTCCCAGGCTTGCCACATGGCGTGCATGTACGTGGGCGGCAGACGCGGGAGGAAAGGGACAATGTaGGCTTATTGGGTCATGGGA +
Preference number: 4 (lower is better)
Translates to: ARSQACHMACMYVGGRRGRKGTM*AYWVMG
Trigger: TCCCATGACCCAATAAGCCCACATTGTCCCTTTCCT...CCCGCGTCTGCCGCCCACGTACATGCACGCCATGTGGCAAGCCTGGGACCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CCA 90 bp TCCAGACACGACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTGCCGTGGGTGGGGGAGTCCTTaGCAGCAAGCGCTCGAGAAC +
Preference number: 4 (lower is better)
Translates to: SRHDSEDRQKRVAGPSCRGWGSP*QQALEN
Trigger: GTTCTCGAGCGCTTGCTGCCAAGGACTCCCCCACCC...ACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTCGTGTCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAAGCGTGCACAGGGCGTaGTCTTCACCACATCGGGAG +
Preference number: 4 (lower is better)
Translates to: FSAQTWGWDSCRNLLLVGSVHRA*SSPHRE
Trigger: CTCCCGATGTGGTGAAGACCACGCCCTGTGCACGCT...TCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TACCCTCCCGAGTTGCAGAGCTGTGAGGCTTCAGCCGGCCGCTGCTCCCGTGCATCGCAGGCTGCCAGCTaGATGCAGTTTTTCATCGAC +
Preference number: 4 (lower is better)
Translates to: YPPELQSCEASAGRCSRASQAAS*MQFFID
Trigger: GTCGATGAAAAACTGCATCCAGCTGGCAGCCTGCGA...TGCACGGGAGCAGCGGCCGGCTGAAGCCTCACAGCTCTGCAACTCGGGAGGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CCA 90 bp GGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAATGGGCAGCAGCTCGGTaGCCTCGCAGGCTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GDGIRAGTFFWWELAFQKWAAAR*PRRLPA
Trigger: AGCTGGCAGCCTGCGAGGCCACCGAGCTGCTGCCCA...TTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TCCAGACACGACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTGCCGTCCCAGGCTTGCCACATaGCGTGCATGTACGTGGGCG +
Preference number: 4 (lower is better)
Translates to: SRHDSEDRQKRVAGPSCRPRLAT*RACTWA
Trigger: CGCCCACGTACATGCACGCCATGTGGCAAGCCTGGG...ACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTCGTGTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp GACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTGCCGTCATCAGCAGGGGCAGCTGTTCGGGTaGGTTTCGGTTCTCCACGCC +
Preference number: 4 (lower is better)
Translates to: DSEDRQKRVAGPSCRHQQGQLFG*VSVLHA
Trigger: GGCGTGGAGAACCGAAACCCACCCGAACAGCTGCCC...CTGCTGATGACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp CCCCAGCTGGCTAGGAAATGTCCCTGCTTGCGTGCACTGACTGTGAGAGGTGGTGCACCTGCAGGACGATaGGCAGCTGTTCGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: PQLARKCPCLRALTVRGGAPAGR*AAVRVG
Trigger: ACCCACCCGAACAGCTGCCCATCGTCCTGCAGGTGC...ACCACCTCTCACAGTCAGTGCACGCAAGCAGGGACATTTCCTAGCCAGCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp GGAGCAGTCGTAGACGAAGATCGACGGGCTGCCCATCCACGTCTGCAGGTCATAGCACCTGCAGGACGATaGGCAGCTGTTCGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: GAVVDEDRRAAHPRLQVIAPAGR*AAVRVG
Trigger: ACCCACCCGAACAGCTGCCCATCGTCCTGCAGGTGC...TATGACCTGCAGACGTGGATGGGCAGCCCGTCGATCTTCGTCTACGACTGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CCA 90 bp ACCACAGGCCCAGCTGTCAGCCGAGGTCGCATCAGCATGGGCGGCTCAAGGCTGGACAGGAAGTACTTGTaGCCGTTGTCCTTCACGAGG +
Preference number: 4 (lower is better)
Translates to: TTGPAVSRGRISMGGSRLDRKYL*PLSFTR
Trigger: CCTCGTGAAGGACAACGGCCACAAGTACTTCCTGTC...CAGCCTTGAGCCGCCCATGCTGATGCGACCTCGGCTGACAGCTGGGCCTGTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR CCA 90 bp CCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCATGTGGTCGATGGTGGTaGAGTGGTCCGTCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: PRRGDGIRAGTFFWWELACGRWW*SGPSSL
Trigger: CAGAGAGGACGGACCACTCCACCACCATCGACCACA...TGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR CCA 90 bp CCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCACGTTGTGGTCGATGGTaGTGGAGTGGTCCGTCCTCT +
Preference number: 4 (lower is better)
Translates to: PRRGDGIRAGTFFWWELARCGRW*WSGPSS
Trigger: AGAGGACGGACCACTCCACCACCATCGACCACAACG...TGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR CCA 90 bp CCCCGTGCCCCGGCGAGTGACAGCTTCACTATGTACAGCAGGCGGCCGTGGCCTGGCGCATCTTGTCGATaGTCTCGAAGGACAGGATAT +
Preference number: 4 (lower is better)
Translates to: PRAPASDSFTMYSRRPWPGASCR*SRRTGY
Trigger: ATATCCTGTCCTTCGAGACCATCGACAAGATGCGCC...AGGCCACGGCCGCCTGCTGTACATAGTGAAGCTGTCACTCGCCGGGGCACGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp ACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCGCCTCACGTCCGAGACCTCTaGATAGGGGTCAGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: TFFWWELAFQKGAAEGPPHVRDL*IGVSSQ
Trigger: CTGGCTGCTGACCCCTATCCAGAGGTCTCGGACGTG...AGGCGGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TTGTGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGCACGCCCTTGTTGGTaGGGCTGGCGGGGGCCGACT +
Preference number: 4 (lower is better)
Translates to: LWLCSVCKTAHTRPAAPPARPCW*GWRGPT
Trigger: AGTCGGCCCCCGCCAGCCCCACCAACAAGGGCGTGC...AGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCACAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp CCCGGCAGTGCCTCTTGCCTGTATGTGAGGAACGTGTGGGGACAGAGCAGGGAGCACGGCGTGAAGGGGTaGAATTTCACCACAGAGGGG +
Preference number: 4 (lower is better)
Translates to: PGSASCLYVRNVWGQSREHGVKG*NFTTEG
Trigger: CCCCTCTGTGGTGAAATTCCACCCCTTCACGCCGTG...CTCCCTGCTCTGTCCCCACACGTTCCTCACATACAGGCAAGAGGCACTGCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp GACCCGGGCTGCTTTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTAGAAGCGAGCAGTCCTaGCCGTTCAGATACTCCATG +
Preference number: 4 (lower is better)
Translates to: DPGCFLGPDVGMGFVPEPRSEQS*PFRYSM
Trigger: CATGGAGTATCTGAACGGCCAGGACTGCTCGCTTCT...AGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAAAGCAGCCCGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGGGCGGAGCTCCTCGCGTCGTTaGCAGCATGTCCGAGAGCCC +
Preference number: 4 (lower is better)
Translates to: LCSVCKTAHTRPAAPPGRSSSRR*QHVREP
Trigger: GGGCTCTCGGACATGCTGCCAACGACGCGAGGAGCT...CCGCCCAGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp CCCGGCAGTGCCTCTTGCCTGTATGTGAGGAACGTGTGGGGACAGAGCAGGGAGCCAGTGTCCCCCAGCTaGCTAGGAAATGTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: PGSASCLYVRNVWGQSREPVSPS*LGNVPA
Trigger: AGCAGGGACATTTCCTAGCCAGCTGGGGGACACTGG...CTCCCTGCTCTGTCCCCACACGTTCCTCACATACAGGCAAGAGGCACTGCCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp CCCGGCAGTGCCTCTTGCCTGTATGTGAGGAACGTGTGGGGACAGAGCAGGGAGGAGAGGGGCCAAAACTaGAGTCCAGAGACCTGGAGG +
Preference number: 4 (lower is better)
Translates to: PGSASCLYVRNVWGQSREERGQN*SPETWR
Trigger: CCTCCAGGTCTCTGGACTCCAGTTTTGGCCCCTCTC...CTCCCTGCTCTGTCCCCACACGTTCCTCACATACAGGCAAGAGGCACTGCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGGGTGGGCGGCTCAAGGCTaGAGACGGGGCTGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: WLCSVCKTAHTRPAAPPGWAAQG*RRGWCH
Trigger: GTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCA...CCCAGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp AGCAGCTCGGTGGCCTCGCAGGCTGCCAGCTGGATGCAGTTTTTCATCGACGGAGGAGAAAGGGCAGGCTaGAAACGCAGGGCTCGGCAT +
Preference number: 4 (lower is better)
Translates to: SSSVASQAASWMQFFIDGGERAG*KRRARH
Trigger: ATGCCGAGCCCTGCGTTTCCAGCCTGCCCTTTCTCC...TCCGTCGATGAAAAACTGCATCCAGCTGGCAGCCTGCGAGGCCACCGAGCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR TCA 90 bp GACCCGGGCTGCTTTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTACGTGCAGAGCTTCTTaGCTTCATCCACAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: DPGCFLGPDVGMGFVPEPTCRAS*LHPQLG
Trigger: ACCCAACTGTGGATGAAGTCAAGAAGCTCTGCACGT...AGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAAAGCAGCCCGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp GAGCAGCCCTTCGGAGGGAAAGGAGCCCCGTGGATTAAGGCAGGGGCTACCTCGGAGGGTGATTTGGGTTaGTTGCAGCTACCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: EQPFGGKGAPWIKAGATSEGDLG*LQLPPA
Trigger: AGCTGGAGGTAGCTGCAATCAACCCAAATCACCCTC...CGAGGTAGCCCCTGCCTTAATCCACGGGGCTCCTTTCCCTCCGAAGGGCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp CAGAGCTGTGAGGCTTCAGCCGGCCGCTGCTCCCGTGCAGTCCTAAAAGGCCCTGAGGGTGATTTGGGTTaGTTGCAGCTACCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: QSCEASAGRCSRAVLKGPEGDLG*LQLPPA
Trigger: AGCTGGAGGTAGCTGCAATCAACCCAAATCACCCTC...AGGGCCTTTTAGGACTGCACGGGAGCAGCGGCCGGCTGAAGCCTCACAGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR TCA 90 bp CCCGGCAGTGCCTCTTGCCTGTATGTGAGGAACGTGTGGGGACAGAGCAGGGAGGGATCTTGGCCCAGATaGAAACGAGAAGTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: PGSASCLYVRNVWGQSREGSWPR*KREVAA
Trigger: TGCGGCCACTTCTCGTTTTCATCTGGGCCAAGATCC...CTCCCTGCTCTGTCCCCACACGTTCCTCACATACAGGCAAGAGGCACTGCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp GATCCAGTTCAGTTCACCCAGGGGCGTCCTCCTGTCGTTCAGGCGGCCAGGGATGGATCTTGGCCCAGATaGAAACGAGAAGTGGCCGCA +
Preference number: 4 (lower is better)
Translates to: DPVQFTQGRPPVVQAARDGSWPR*KREVAA
Trigger: TGCGGCCACTTCTCGTTTTCATCTGGGCCAAGATCC...ATCCCTGGCCGCCTGAACGACAGGAGGACGCCCCTGGGTGAACTGAACTGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR TCA 90 bp ACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCGCCTCGATCACGGCGAGAATaGAAGCCGTCATGGTCCGGT +
Preference number: 4 (lower is better)
Translates to: TFFWWELAFQKGAAEGPPRSRRE*KPSWSG
Trigger: ACCGGACCATGACGGCTTTCATTCTCGCCGTGATCG...AGGCGGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR TCA 90 bp TTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGATACTCCATGGCAGTaGCCCTCGTGTACCGAGGGT +
Preference number: 4 (lower is better)
Translates to: FSAQTWGWDSCRNLLLVGDTPWQ*PSCTEG
Trigger: ACCCTCGGTACACGAGGGTCACTGCCATGGAGTATC...TCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp CCCCAGCTGGCTAGGAAATGTCCCTGCTTGCGTGCACTGACTGTGAGAGGTGGTCCGTGCCCCGGCGAGTaGCAGCTTCACTATGTACAG +
Preference number: 4 (lower is better)
Translates to: PQLARKCPCLRALTVRGGPCPGE*QLHYVQ
Trigger: CTGTACATAGTGAAGCTGTCACTCGCCGGGGCACGG...ACCACCTCTCACAGTCAGTGCACGCAAGCAGGGACATTTCCTAGCCAGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp GGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAATCCAGCTCAGCCCCCTaGGGGCCAGGTGTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: GDGIRAGTFFWWELAFQKSSSAP*GPGVSL
Trigger: CAGAGACACACCTGGCCCTCAGGGGGCTGAGCTGGA...TTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp GATCCAGTTCAGTTCACCCAGGGGCGTCCTCCTGTCGTTCAGGCGGCCAGGGATGGCTGCGAGGGGAGCTaGCAAAAGCGTAAGAGACTT +
Preference number: 4 (lower is better)
Translates to: DPVQFTQGRPPVVQAARDGCEGS*QKRKRL
Trigger: AAGTCTCTTACGCTTTTGGCAGCTCCCCTCGCAGCC...ATCCCTGGCCGCCTGAACGACAGGAGGACGCCCCTGGGTGAACTGAACTGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR GCA 90 bp CATCACAGTGCCACGGAGGGCGGGGGAGCACGGCACCTGGAGGATCCTGAAACACCCAGAAGAGGCGATTaGAGCATTTCGGACTCCATC +
Preference number: 4 (lower is better)
Translates to: HHSATEGGGARHLEDPETPRRGD*SISDSI
Trigger: GATGGAGTCCGAAATGCTGCAATCGCCTCTTCTGGG...TGTTTCAGGATCCTCCAGGTGCCGTGCTCCCCCGCCCTCCGTGGCACTGTGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR GCA 90 bp GCCGGCAGGTTCACATCACTCTGGGGAGGAGGGCGGGGATACTCACGCTGTCCACCCAGAAGAGGCGATTaGAGCATTTCGGACTCCATC +
Preference number: 4 (lower is better)
Translates to: AGRFTSLWGGGRGYSRCPPRRGD*SISDSI
Trigger: GATGGAGTCCGAAATGCTGCAATCGCCTCTTCTGGG...TGGACAGCGTGAGTATCCCCGCCCTCCTCCCCAGAGTGATGTGAACCTGCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR GCA 90 bp TCCAGACACGACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTGCCGTGCTACCTCCAGCTCCTaGTCCCGCTGTAGTGCGAAC +
Preference number: 4 (lower is better)
Translates to: SRHDSEDRQKRVAGPSCRATSSS*SRCSAN
Trigger: GTTCGCACTACAGCGGGAGCAGGAGCTGGAGGTAGC...ACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTCGTGTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CAAAAAGGAGCAGCGGAGGGGCCGCCTCTGTCCTGCCTTGTCACGTCCCGGCCAGTGATTTGGGTTGATTaGAGCTACCTCCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: QKGAAEGPPLSCLVTSRPVIWVD*SYLQLL
Trigger: CAGGAGCTGGAGGTAGCTGCAATCAACCCAAATCAC...TGGCCGGGACGTGACAAGGCAGGACAGAGGCGGCCCCTCCGCTGCTCCTTTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp AGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACCCGGAGACTGACACATTTCTaGATGCAAAACCAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: RSHQHGRLKAGDGAGVTRRLTHF*MQNQRR
Trigger: CCTGCGCTGGTTTTGCATGCAGAAATGTGTCAGTCT...CCGGGTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CCCCAGCTGGCTAGGAAATGTCCCTGCTTGCGTGCACTGACTGTGAGAGGTGGTGCTTGCCACATGGCGTaGATGTACGTGGGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: PQLARKCPCLRALTVRGGACHMA*MYVGGR
Trigger: TCTGCCGCCCACGTACATGCACGCCATGTGGCAAGC...ACCACCTCTCACAGTCAGTGCACGCAAGCAGGGACATTTCCTAGCCAGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp TTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGGGCGGGAGCCACACCTGGAATaGGGTCAGCTGCTCGGCGAA +
Preference number: 4 (lower is better)
Translates to: LCSVCKTAHTRPAAPPGREPHLE*GQLLGE
Trigger: TTCGCCGAGCAGCTGACCGCATTCCAGGTGTGGCTC...CCGCCCAGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp TGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAATGGCGCAGCAAGGGGTaGGGGTCGTTGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: WGWDSCRNLLLVGARIPKWRSKG*GSLSCS
Trigger: GGAGCAGCTCAACGACCCGCACCCCTTGCTGCGCCA...TTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR GCA 90 bp GCCGAGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACACTGCAGGGCCACGGTaGAGAAATTGCTTTCATACT +
Preference number: 4 (lower is better)
Translates to: AEVASAWAAQGWRRGWCHTAGPR*RNCFHT
Trigger: AGTATGAAAGCAATTTCTGCACCGTGGCCCTGCAGT...GTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp TTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGATCGCAGAACCCCGTCTaGACCGTGGCGGAGATGAAA +
Preference number: 4 (lower is better)
Translates to: FSAQTWGWDSCRNLLLVGSQNPV*TVAEMK
Trigger: TTTCATCTCCGCCACGGTGCAGACGGGGTTCTGCGA...TCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CCCCAGCTGGCTAGGAAATGTCCCTGCTTGCGTGCACTGACTGTGAGAGGTGGTACCACCCAGGCTGTGTaGTCCCGGTACGTCATGACG +
Preference number: 4 (lower is better)
Translates to: PQLARKCPCLRALTVRGGTTQAV*SRYVMT
Trigger: CGTCATGACGTACCGGGAGCACACAGCCTGGGTGGT...ACCACCTCTCACAGTCAGTGCACGCAAGCAGGGACATTTCCTAGCCAGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp TTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGGGCGGGTAGCAGGGCCCTCCTaGCGTCATCAGCAGCTAAGG +
Preference number: 4 (lower is better)
Translates to: LCSVCKTAHTRPAAPPGRVAGPS*RHQQLR
Trigger: CCTTAGCTGCTGATGACGGCAGGAGGGCCCTGCTAC...CCGCCCAGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CCCGGCAGTGCCTCTTGCCTGTATGTGAGGAACGTGTGGGGACAGAGCAGGGAGATGTCCCTGCTTGCGTaGACTGACTGTGAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PGSASCLYVRNVWGQSREMSLLA*TDCERW
Trigger: CCACCTCTCACAGTCAGTGCACGCAAGCAGGGACAT...CTCCCTGCTCTGTCCCCACACGTTCCTCACATACAGGCAAGAGGCACTGCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp TGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAGGAGACCACGCCGCCTaGATGTGTGTGCCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: WGWDSCRNLLLVGARIPKGDHAA*MCVPPG
Trigger: ACCTGGGGGCACACACATGCAGGCGGCGTGGTCTCC...TTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCATGGGGATGGGATTCGTaGCGGAACCTTCTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: PRRGDGIRAGTFFWWELAWGWDS*RNLLLV
Trigger: CACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCA...TGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CCCGGCAGTGCCTCTTGCCTGTATGTGAGGAACGTGTGGGGACAGAGCAGGGAGCCCTCTGGAGCCACCTaGCTTTTGACAGGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: PGSASCLYVRNVWGQSREPSGAT*LLTGGD
Trigger: ATCACCACCTGTCAAAAGGCAGGTGGCTCCAGAGGG...CTCCCTGCTCTGTCCCCACACGTTCCTCACATACAGGCAAGAGGCACTGCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp ACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCGCCTCAGCTCGCTGTCCACTaGGAGGATCTTGGCCCAGAT +
Preference number: 4 (lower is better)
Translates to: TFFWWELAFQKGAAEGPPQLAVH*EDLGPD
Trigger: ATCTGGGCCAAGATCCTCGCAGTGGACAGCGAGCTG...AGGCGGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544334.6
CDS-3UTR GCA 90 bp CACACCTGGAATGCGGTCAGCTGCTCGGCGAAGAACGGGCTGTGCCGAAACGCAAGGAGGACGCCATATTaGCAGGACCCAGAATGCACC +
Preference number: 4 (lower is better)
Translates to: HTWNAVSCSAKNGLCRNARRTPY*QDPECT
Trigger: GGTGCATTCTGGGTCCTGGCAATATGGCGTCCTCCT...TGCGTTTCGGCACAGCCCGTTCTTCGCCGAGCAGCTGACCGCATTCCAGGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR GCA 90 bp TACCCTCCCGAGTTGCAGAGCTGTGAGGCTTCAGCCGGCCGCTGCTCCCGTGCAAACTCTCTTGCAAAGTaGTACCCTCCCGAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: YPPELQSCEASAGRCSRANSLAK*YPPELQ
Trigger: CTGCAACTCGGGAGGGTAGCACTTTGCAAGAGAGTT...TGCACGGGAGCAGCGGCCGGCTGAAGCCTCACAGCTCTGCAACTCGGGAGGGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CCA 90 bp GCTTCAGCCGGCCGCTGCTCCCGTGCAGTCCTAAAAGGCCCTCCAAGGCTTCTGGGGCTTATTGGGTCATaGGAGCTTTGCCCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: ASAGRCSRAVLKGPPRLLGLIGS*ELCPLV
Trigger: AACCAGAGGGCAAAGCTCCCATGACCCAATAAGCCC...CAGAAGCCTTGGAGGGCCTTTTAGGACTGCACGGGAGCAGCGGCCGGCTGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CCA 90 bp GACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTGCCGTCATCAGCAGGGGTTCAAAGGGCCCTaGGTCTCCTCCAGCCACTCT +
Preference number: 4 (lower is better)
Translates to: DSEDRQKRVAGPSCRHQQGFKGP*VSSSHS
Trigger: AGAGTGGCTGGAGGAGACCCAGGGCCCTTTGAACCC...CTGCTGATGACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR CCA 90 bp AGTTCACCCAGGGGCGTCCTCCTGTCGTTCAGGCGGCCAGGGATCTTTTCTATCAGCGTGCACAGGGCGTaGTCTTCACCACATCGGGAG +
Preference number: 4 (lower is better)
Translates to: SSPRGVLLSFRRPGIFSISVHRA*SSPHRE
Trigger: CTCCCGATGTGGTGAAGACCACGCCCTGTGCACGCT...GATAGAAAAGATCCCTGGCCGCCTGAACGACAGGAGGACGCCCCTGGGTGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CCA 90 bp TCCAGACACGACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTGCCGTGGACTCGCTCCTCCTTaGCGTTGCGACGTAAGGACG +
Preference number: 4 (lower is better)
Translates to: SRHDSEDRQKRVAGPSCRGLAPP*RCDVRT
Trigger: CGTCCTTACGTCGCAACGCCAAGGAGGAGCGAGTCC...ACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTCGTGTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp CGGGGGAGCACGTTCCACGCGATGGTGTCTGTGATGGCTGTGAAGATCCAGTTCGGACTCGCTCCTCCTTaGCGTTGCGACGTAAGGACG +
Preference number: 4 (lower is better)
Translates to: RGSTFHAMVSVMAVKIQFGLAPP*RCDVRT
Trigger: CGTCCTTACGTCGCAACGCCAAGGAGGAGCGAGTCC...GAACTGGATCTTCACAGCCATCACAGACACCATCGCGTGGAACGTGCTCCCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CCA 90 bp GACCCGGGCTGCTTTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTCGATCAAGCCAGCATTaGAGCAGTCGTAGACGAAGA +
Preference number: 4 (lower is better)
Translates to: DPGCFLGPDVGMGFVPEPRSSQH*SSRRRR
Trigger: TCTTCGTCTACGACTGCTCCAATGCTGGCTTGATCG...AGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAAAGCAGCCCGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp GCCGGCAGGTTCACATCACTCTGGGGAGGAGGGCGGGGATACTCACGCTGTCCATGTCTGAAGAGCTTTTaGAAGAGATCCCGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: AGRFTSLWGGGRGYSRCPCLKSF*KRSRGS
Trigger: GCTCCCCCGGGATCTCTTCCAAAAGCTCTTCAGACA...TGGACAGCGTGAGTATCCCCGCCCTCCTCCCCAGAGTGATGTGAACCTGCCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CCA 90 bp TTGTGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTTGGCGTGCATGTACGTaGGCGGCAGACGCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LWLCSVCKTAHTRPAAPPWRACT*AADAGC
Trigger: GCAGCCCGCGTCTGCCGCCCACGTACATGCACGCCA...AGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp AACAGCACCTGCAGGACGATGGGCAGCTGTTCGGGTGGGTTTCGGTTCTCCACGCTCAGCCGGTGCACTTaGCTTAACAGCACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: NSTCRTMGSCSGGFRFSTLSRCT*LNSTCR
Trigger: CCTGCAGGTGCTGTTAAGCCAAGTGCACCGGCTGAG...CGTGGAGAACCGAAACCCACCCGAACAGCTGCCCATCGTCCTGCAGGTGCTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CCA 90 bp CCCCAGCTGGCTAGGAAATGTCCCTGCTTGCGTGCACTGACTGTGAGAGGTGGTGCTGGGCCAGCATCATaGCCACGTTGTGGTCGATGG +
Preference number: 4 (lower is better)
Translates to: PQLARKCPCLRALTVRGGAGPAS*PRCGRW
Trigger: CCATCGACCACAACGTGGCCATGATGCTGGCCCAGC...ACCACCTCTCACAGTCAGTGCACGCAAGCAGGGACATTTCCTAGCCAGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR CCA 90 bp TTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGACACGGCGTGAAGGGGTaGAATTTCACCACAGAGGGG +
Preference number: 4 (lower is better)
Translates to: FSAQTWGWDSCRNLLLVGHGVKG*NFTTEG
Trigger: CCCCTCTGTGGTGAAATTCCACCCCTTCACGCCGTG...TCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp GGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAACCCAGGTGCCGGCCGTaGTGCCATCTGCACATGCGT +
Preference number: 4 (lower is better)
Translates to: GDGIRAGTFFWWELAFQKPRCRP*CHLHMR
Trigger: ACGCATGTGCAGATGGCACCACGGCCGGCACCTGGG...TTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp AGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACCCGGCAGAATGAAGCCACCTaGCTCCTTCACCTCTCAATA +
Preference number: 4 (lower is better)
Translates to: RSHQHGRLKAGDGAGVTRQNEAT*LLHLSI
Trigger: TATTGAGAGGTGAAGGAGCCAGGTGGCTTCATTCTG...CCGGGTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp CCCCAGCTGGCTAGGAAATGTCCCTGCTTGCGTGCACTGACTGTGAGAGGTGGTTCACTCCCGTGGTCGTaGGCCTCTCACCGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: PQLARKCPCLRALTVRGGSLPWS*ASHRQN
Trigger: ATTCTGGCGGTGAGAGGCCCACGACCACGGGAGTGA...ACCACCTCTCACAGTCAGTGCACGCAAGCAGGGACATTTCCTAGCCAGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp GACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTGCCGTCATCAGCAGTCACTCCCGTGGTCGTaGGCCTCTCACCGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: DSEDRQKRVAGPSCRHQQSLPWS*ASHRQN
Trigger: ATTCTGGCGGTGAGAGGCCCACGACCACGGGAGTGA...CTGCTGATGACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGGGCGGGCCCAGACGTGGGGATaGGATTCGTGCCGGAACCTT +
Preference number: 4 (lower is better)
Translates to: LCSVCKTAHTRPAAPPGRAQTWG*DSCRNL
Trigger: AAGGTTCCGGCACGAATCCCATCCCCACGTCTGGGC...CCGCCCAGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGGGTTCTCGGCCCAGACGTaGGGATGGGATTCGTGCCGG +
Preference number: 4 (lower is better)
Translates to: WLCSVCKTAHTRPAAPPGFSAQT*GWDSCR
Trigger: CCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAA...CCCAGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTTCTGGAAGATTCTaGTGTTGCCGCCTGGCACGC +
Preference number: 4 (lower is better)
Translates to: FSAQTWGWDSCRNLLLVGASGRF*CCRLAR
Trigger: GCGTGCCAGGCGGCAACACCAGAATCTTCCAGAAGC...TCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp CATGGGCAGCAGCTCGGTGGCCTCGCAGGCTGCCAGCTGGATGCAGTTTTTCATAGGTTCACATCACTCTaGGGAGGAGGGCGGGGATAC +
Preference number: 4 (lower is better)
Translates to: HGQQLGGLAGCQLDAVFHRFTSL*GGGRGY
Trigger: GTATCCCCGCCCTCCTCCCCAGAGTGATGTGAACCT...ATGAAAAACTGCATCCAGCTGGCAGCCTGCGAGGCCACCGAGCTGCTGCCCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574767.5
3UTR CAA 72 bp AGGGCGGGGATACTCACGCTGTCCACTGCGAGGATCTaGGCCCAGATGAAAACGAGAAGTGGCCGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RAGILTLSTARI*AQMKTRSGRSS
Trigger: AGAGCTGCGGCCACTTCTCGTTTTCATCTGGGCCAAGATCCTCGCAGTGGACAGCGTGAGTATCCCCGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR TCA 90 bp GGGATACTCACGCTGTCCACTGCGAGGATCTTGGCCCAGATGAAAACGAGAAGTGGTCCCGCACTCGTCTaGGCTGCTGCAACCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GILTLSTARILAQMKTRSGPALV*AAATRA
Trigger: GGCTCTGGTTGCAGCAGCTCAGACGAGTGCGGGACC...ACTTCTCGTTTTCATCTGGGCCAAGATCCTCGCAGTGGACAGCGTGAGTATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR TCA 90 bp CCCGGCAGTGCCTCTTGCCTGTATGTGAGGAACGTGTGGGGACAGAGCAGGGAGGAGGGTGATTTGGGTTaGTTGCAGCTACCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PGSASCLYVRNVWGQSREEGDLG*LQLPPA
Trigger: AGCTGGAGGTAGCTGCAATCAACCCAAATCACCCTC...CTCCCTGCTCTGTCCCCACACGTTCCTCACATACAGGCAAGAGGCACTGCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp ATGTACGTGGGCGGCAGACGCGGGCTGCTGACGGGAGTGCAGTTATACGACCTCGAGGGTGATTTGGGTTaGTTGCAGCTACCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: MYVGGRRGLLTGVQLYDLEGDLG*LQLPPA
Trigger: AGCTGGAGGTAGCTGCAATCAACCCAAATCACCCTC...GAGGTCGTATAACTGCACTCCCGTCAGCAGCCCGCGTCTGCCGCCCACGTACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR TCA 90 bp TTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGGGCGGCAGTGCCTTCCTCGATaGTCGTCGGCAGCTGAGACA +
Preference number: 4 (lower is better)
Translates to: LCSVCKTAHTRPAAPPGRQCLPR*SSAAET
Trigger: TGTCTCAGCTGCCGACGATCATCGAGGAAGGCACTG...CCGCCCAGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp CCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCATCTGCAAAGATTTGTTaGGGCTCCTGGCTGTGGCGA +
Preference number: 4 (lower is better)
Translates to: PRRGDGIRAGTFFWWELASAKIC*GSWLWR
Trigger: TCGCCACAGCCAGGAGCCTCAACAAATCTTTGCAGA...TGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp CCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCACTTCTGGGATCTTCATaGCGGGCTGGGCAAAATAGC +
Preference number: 4 (lower is better)
Translates to: PRRGDGIRAGTFFWWELALLGSS*RAGQNS
Trigger: GCTATTTTGCCCAGCCCGTCATGAAGATCCCAGAAG...TGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp CCGTGGTCGTGGGCCTCTCACCGCCAGAATGAAGCCACCTGGCTCCTTCACCTCAGCCCCTTCACGATCTaGAGCACATTTACCGACTCA +
Preference number: 4 (lower is better)
Translates to: PWSWASHRQNEATWLLHLSPFTI*STFTDS
Trigger: TGAGTCGGTAAATGTGCTTCAGATCGTGAAGGGGCT...GAGGTGAAGGAGCCAGGTGGCTTCATTCTGGCGGTGAGAGGCCCACGACCACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp CGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCCCTCTTGCCTGTATGTaGGGAACGTGTGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: RNLLLVGARIPKRSSGGAPLACM*GTCGDR
Trigger: TCTGTCCCCACACGTTCCTCACATACAGGCAAGAGG...GGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp TTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGGGCGGGTCTCTGGCCAAATGTaGCCAGGCAGGGTTCCATCC +
Preference number: 4 (lower is better)
Translates to: LCSVCKTAHTRPAAPPGRVSGQM*PGRVPS
Trigger: GGATGGAACCCTGCCTGGTCACATTTGGCCAGAGAC...CCGCCCAGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp CGCAGCAGCCGACGCCCCGTGCCCCGGCGAGTGACAGCTTCACTATGTACAGCAGTGTTGGGTAAGAATTaGGTTGAAGGACTGGATGGG +
Preference number: 4 (lower is better)
Translates to: RSSRRPVPRRVTASLCTAVLGKN*VEGLDG
Trigger: CCCATCCAGTCCTTCAACTCAATTCTTACCCAACAC...TGCTGTACATAGTGAAGCTGTCACTCGCCGGGGCACGGGGCGTCGGCTGCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp AGATCTCTGGGAGCCCTGCATTTAGCTTCACTTGTTAATGCTACACGGGGTCCCACGACCGGCCCATCGTaGTCGCCTGCACCCGGTTCC +
Preference number: 4 (lower is better)
Translates to: RSLGALHLASLVNATRGPTTGPS*SPAPGS
Trigger: GGAACCGGGTGCAGGCGAGCACGATGGGCCGGTCGT...GGGACCCCGTGTAGCATTAACAAGTGAAGCTAAATGCAGGGCTCCCAGAGATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR GCA 90 bp TGGAGATCTCTGGGAGCCCTGCATTTAGCTTCACTTGTTAATGCTACACGGGGTGCAGGCCGCTCTTGGTaGCGGTTCGCCCACTGGGCC +
Preference number: 4 (lower is better)
Translates to: WRSLGALHLASLVNATRGAGRSW*RFAHWA
Trigger: GGCCCAGTGGGCGAACCGGCACCAAGAGCGGCCTGC...ACCCCGTGTAGCATTAACAAGTGAAGCTAAATGCAGGGCTCCCAGAGATCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR GCA 90 bp CAAAAAGGAGCAGCGGAGGGGCCGCCTCTGTCCTGCCTTGTCACGTCCCGGCCACAAATGGATAAAGAGTaGGGAGACCCTTACTCAGGC +
Preference number: 4 (lower is better)
Translates to: QKGAAEGPPLSCLVTSRPQMDKE*GDPYSG
Trigger: GCCTGAGTAAGGGTCTCCGCACTCTTTATCCATTTG...TGGCCGGGACGTGACAAGGCAGGACAGAGGCGGCCCCTCCGCTGCTCCTTTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCACCCAGAAGAGGCGATTaGAGCATTTCGGACTCCATC +
Preference number: 4 (lower is better)
Translates to: PRRGDGIRAGTFFWWELAPRRGD*SISDSI
Trigger: GATGGAGTCCGAAATGCTGCAATCGCCTCTTCTGGG...TGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp AGGAGGGCGGGGATACTCACGCTGTCCACTGCGAGGATCTTGGCCCAGATGAAACCAGCATTCCAAGCGTaGACAGGGCGTGGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: RRAGILTLSTARILAQMKPAFQA*TGRGLH
Trigger: GTGAAGACCACGCCCTGTGCACGCTTGGAATGCTGG...TTTCATCTGGGCCAAGATCCTCGCAGTGGACAGCGTGAGTATCCCCGCCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR GCA 90 bp AGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACCCGGTGCCAGTTCTCGTACTaGTTCTGTAAATTTGCACCG +
Preference number: 4 (lower is better)
Translates to: RSHQHGRLKAGDGAGVTRCQFSY*FCKFAP
Trigger: CGGTGCAAATTTACAGAAGCAGTACGAGAACTGGCA...CCGGGTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp ACGCTGTCCACTGCGAGGATCTTGGCCCAGATGAAAACGAGAAGTGGCCGCAGCGCTCCTCCTTGGCGTTaGGACGTAAGGACGTGCAGA +
Preference number: 4 (lower is better)
Translates to: TLSTARILAQMKTRSGRSAPPWR*DVRTCR
Trigger: TCTGCACGTCCTTACGTCGCAACGCCAAGGAGGAGC...GCTGCGGCCACTTCTCGTTTTCATCTGGGCCAAGATCCTCGCAGTGGACAGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR GCA 90 bp CCGTGGTCGTGGGCCTCTCACCGCCAGAATGAAGCCACCTGGCTCCTTCACCTCCGCTGTAGTGCGAACTaGTTGAAGGACTTGACGATC +
Preference number: 4 (lower is better)
Translates to: PWSWASHRQNEATWLLHLRCSAN*LKDLTI
Trigger: GATCGTCAAGTCCTTCAAGCAGTTCGCACTACAGCG...GAGGTGAAGGAGCCAGGTGGCTTCATTCTGGCGGTGAGAGGCCCACGACCACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp GCTCCGTGCAATTCCATGACATCACAGTGCCACGGAGGGCGGGGGAGCACGGCAGTGATTTGGGTTGATTaGAGCTACCTCCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: APCNSMTSQCHGGRGSTAVIWVD*SYLQLL
Trigger: CAGGAGCTGGAGGTAGCTGCAATCAACCCAAATCAC...TGCCGTGCTCCCCCGCCCTCCGTGGCACTGTGATGTCATGGAATTGCACGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR GCA 90 bp CCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCAAGGCTGCCAGCTGGATaGAGTTTTTCATCGACGGAG +
Preference number: 4 (lower is better)
Translates to: PRRGDGIRAGTFFWWELARLPAG*SFSSTE
Trigger: CTCCGTCGATGAAAAACTGCATCCAGCTGGCAGCCT...TGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp TGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGGGTGGAATGCGGTCAGCTaGTCGGCGAAGAACGGGCTG +
Preference number: 4 (lower is better)
Translates to: WLCSVCKTAHTRPAAPPGWNAVS*SAKNGL
Trigger: CAGCCCGTTCTTCGCCGAGCAGCTGACCGCATTCCA...CCCAGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp TTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGATGGCTTAACAGCACCTaGAGGACGATGGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: FSAQTWGWDSCRNLLLVGWLNST*RTMGSC
Trigger: ACAGCTGCCCATCGTCCTGCAGGTGCTGTTAAGCCA...TCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CCGTGGTCGTGGGCCTCTCACCGCCAGAATGAAGCCACCTGGCTCCTTCACCTCTCCTCTTCTATGAACTaGAGGGCCACGGTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: PWSWASHRQNEATWLLHLSSSMN*RATVQK
Trigger: TTTCTGCACCGTGGCCCTGCAGTTCATAGAAGAGGA...GAGGTGAAGGAGCCAGGTGGCTTCATTCTGGCGGTGAGAGGCCCACGACCACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp ACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCGCCTATGACTTGCTGGGCCTaGCTCCTGACACGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: TFFWWELAFQKGAAEGPPMTCWA*LLTRLF
Trigger: AAACAGCCGTGTCAGGAGGCAGGCCCAGCAAGTCAT...AGGCGGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp GCTCCGTGCAATTCCATGACATCACAGTGCCACGGAGGGCGGGGGAGCACGGCAGGGAGCTTTGCCCTCTaGTTTGGAGCTACAGTGAAA +
Preference number: 4 (lower is better)
Translates to: APCNSMTSQCHGGRGSTAGSFAL*FGATVK
Trigger: TTTCACTGTAGCTCCAAACCAGAGGGCAAAGCTCCC...TGCCGTGCTCCCCCGCCCTCCGTGGCACTGTGATGTCATGGAATTGCACGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CCA 90 bp GGCGAAGAACGGGCTGTGCCGAAACGCAGTGCCTTCCTCGATGATCGTCGGCAGGGGCTTATTGGGTCATaGGAGCTTTGCCCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: GEERAVPKRSAFLDDRRQGLIGS*ELCPLV
Trigger: AACCAGAGGGCAAAGCTCCCATGACCCAATAAGCCC...CTGCCGACGATCATCGAGGAAGGCACTGCGTTTCGGCACAGCCCGTTCTTCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CCA 90 bp TGGAGATCTCTGGGAGCCCTGCATTTAGCTTCACTTGTTAATGCTACACGGGGTCGGCCTGGCTGGTCCTaGCCTTCAGCCCCGAGGCTC +
Preference number: 4 (lower is better)
Translates to: WRSLGALHLASLVNATRGRPGWS*PSAPRL
Trigger: GAGCCTCGGGGCTGAAGGCCAGGACCAGCCAGGCCG...ACCCCGTGTAGCATTAACAAGTGAAGCTAAATGCAGGGCTCCCAGAGATCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CCA 90 bp CCACGTCTGCAGGTCATATATGGACAGAGGGATGTACTGCGTGTAGTTCTTGTTTCCGCGCGGCCTGGCTaGTCCTGGCCTTCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: PRLQVIYGQRDVLRVVLVSARPG*SWPSAP
Trigger: CGGGGCTGAAGGCCAGGACCAGCCAGGCCGCGCGGA...AACAAGAACTACACGCAGTACATCCCTCTGTCCATATATGACCTGCAGACGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CCA 90 bp GAAAGAGGACTCGCTCCTCCTTGGCGTTGCGACGTAAGGACGTGCAGAGCTTCTCAGGTCCCAAGCCACTaGCTGCTCCTGAGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: ERGLAPPWRCDVRTCRASQVPSH*LLLRLY
Trigger: GTACAGCCTCAGGAGCAGCCAGTGGCTTGGGACCTG...AGAAGCTCTGCACGTCCTTACGTCGCAACGCCAAGGAGGAGCGAGTCCTCTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CCA 90 bp GCGAGGCTGGAGAAAGGGCAGGCTGGAAACGCAGGGCTCGGCATCCCCAGAAGGGACTTCATCCACAGTTaGGTCAAGGCTCTGCTTGTA +
Preference number: 4 (lower is better)
Translates to: ARLEKGQAGNAGLGIPRRDFIHS*VKALLV
Trigger: TACAAGCAGAGCCTTGACCCAACTGTGGATGAAGTC...CCTTCTGGGGATGCCGAGCCCTGCGTTTCCAGCCTGCCCTTTCTCCAGCCTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CCA 90 bp GACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTGCCGTCATCAGCAGATGGTGAGCCACACCTaGAATGCGGTCAGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: DSEDRQKRVAGPSCRHQQMVSHT*NAVSCS
Trigger: CGAGCAGCTGACCGCATTCCAGGTGTGGCTCACCAT...CTGCTGATGACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGGGCGGCTCAGCCGGTGCACTTaGCTTAACAGCACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LCSVCKTAHTRPAAPPGRLSRCT*LNSTCR
Trigger: CCTGCAGGTGCTGTTAAGCCAAGTGCACCGGCTGAG...CCGCCCAGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp GGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGGAGGAGTAGGAGCTaGCGCGGCGCATCTTGTCGA +
Preference number: 4 (lower is better)
Translates to: GDGIRAGTFFWWELAFQKGRSRS*RGASCR
Trigger: TCGACAAGATGCGCCGCGCCAGCTCCTACTCCTCCC...TTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGGGGCTTGGCCACATCGTTaGTCAGGCTGGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: WLCSVCKTAHTRPAAPPGAWPHR*SGWSCW
Trigger: CCAGCAGCTCCAGCCTGACCAACGATGTGGCCAAGC...CCCAGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGTCCGCAGTCTGCTCTaGGCCCTTGTCGAACATCTT +
Preference number: 4 (lower is better)
Translates to: FSAQTWGWDSCRNLLLVGVRSLL*ALVEHL
Trigger: AAGATGTTCGACAAGGGCCCAGAGCAGACTGCGGAC...TCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGGGCGGTTCACACCCGCCAGTTaGAGGGGCGTCTCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LCSVCKTAHTRPAAPPGRFTPAS*RGVSFF
Trigger: GAAGAAGGAGACGCCCCTCCAACTGGCGGGTGTGAA...CCGCCCAGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp GACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTGCCGTCATCAGCAGGAGAGGGGCCAAAACTaGAGTCCAGAGACCTGGAGG +
Preference number: 4 (lower is better)
Translates to: DSEDRQKRVAGPSCRHQQERGQN*SPETWR
Trigger: CCTCCAGGTCTCTGGACTCCAGTTTTGGCCCCTCTC...CTGCTGATGACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGGGCGGGGCCAGGTGTGTCTCTaGCCAAATGTGACCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LCSVCKTAHTRPAAPPGRGQVCL*PNVTRQ
Trigger: CTGCCTGGTCACATTTGGCCAGAGACACACCTGGCC...CCGCCCAGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCCGGAACCTTCTTCTaGTGGGAGCTCGCATTCCAA +
Preference number: 4 (lower is better)
Translates to: FSAQTWGWDSCRNLLLVGAGTFF*WELAFQ
Trigger: TTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCGGC...TCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp GAGCAGCCCTTCGGAGGGAAAGGAGCCCCGTGGATTAAGGCAGGGGCTACCTCGATTGAGTTGAAGGACTaGATGGGAAGCTGCGTGTGC +
Preference number: 4 (lower is better)
Translates to: EQPFGGKGAPWIKAGATSIELKD*MGSCVC
Trigger: GCACACGCAGCTTCCCATCCAGTCCTTCAACTCAAT...CGAGGTAGCCCCTGCCTTAATCCACGGGGCTCCTTTCCCTCCGAAGGGCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp GAGTTGCAGAGCTGTGAGGCTTCAGCCGGCCGCTGCTCCCGTGCAGTCCTAAAAGAAACACTCACCACATaGCGTGCATGTACGTGGGCG +
Preference number: 4 (lower is better)
Translates to: ELQSCEASAGRCSRAVLKETLTT*RACTWA
Trigger: CGCCCACGTACATGCACGCCATGTGGTGAGTGTTTC...TTTTAGGACTGCACGGGAGCAGCGGCCGGCTGAAGCCTCACAGCTCTGCAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR TCA 90 bp CACAGGTCGGGCTGCTGTCCCCGCGCCTGTGGGGAAGAGCAGCCCTTCGGAGGGGTGTACCAGAATTGGTaGAATAAGAAACAAAAACGG +
Preference number: 4 (lower is better)
Translates to: HRSGCCPRACGEEQPFGGVYQNW*NKKQKR
Trigger: CCGTTTTTGTTTCTTATTTCACCAATTCTGGTACAC...CCCTCCGAAGGGCTGCTCTTCCCCACAGGCGCGGGGACAGCAGCCCGACCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp CCGGGGGAGCACGTTCCACGCGATGGTGTCTGTGATGGCTGTGAAGATCCAGTTGCGTGTAGTTCTTGTTaGAGACCCAGACCTCCCCGT +
Preference number: 4 (lower is better)
Translates to: PGEHVPRDGVCDGCEDPVACSSC*RPRPPR
Trigger: ACGGGGAGGTCTGGGTCTTCAACAAGAACTACACGC...AACTGGATCTTCACAGCCATCACAGACACCATCGCGTGGAACGTGCTCCCCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR TCA 90 bp ACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCGCCTTCTTTTCCTCTTCTATaGACTGCAGGGCCACGGTGC +
Preference number: 4 (lower is better)
Translates to: TFFWWELAFQKGAAEGPPSFPLL*TAGPRC
Trigger: GCACCGTGGCCCTGCAGTTCATAGAAGAGGAAAAGA...AGGCGGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp TGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAAGGCAAGTCTCGGCTaGCCGGCTGCTTGGCCACAT +
Preference number: 4 (lower is better)
Translates to: WGWDSCRNLLLVGARIPKKASLG*PAAWPH
Trigger: ATGTGGCCAAGCAGCCGGTCAGCCGAGACTTGCCTT...TTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp TGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGGGGCTGACAGCTCTGTGTaGGAGGGGCCAAAACTGGAG +
Preference number: 4 (lower is better)
Translates to: WLCSVCKTAHTRPAAPPGADSSV*EGPKLE
Trigger: CTCCAGTTTTGGCCCCTCTCACACAGAGCTGTCAGC...CCCAGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp AGATCTCTGGGAGCCCTGCATTTAGCTTCACTTGTTAATGCTACACGGGGTCCCCGAGTTGCAGAGCTGTaGGGCTTCAGCCGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: RSLGALHLASLVNATRGPRVAEL*GFSRPL
Trigger: CAGCGGCCGGCTGAAGCCTCACAGCTCTGCAACTCG...GGGACCCCGTGTAGCATTAACAAGTGAAGCTAAATGCAGGGCTCCCAGAGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR GCA 90 bp TGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGGGTACCGGGCCCTTGGCTaGCAGTTCTCGTACTGCTTC +
Preference number: 4 (lower is better)
Translates to: WLCSVCKTAHTRPAAPPGYRALG*QFSYCF
Trigger: GAAGCAGTACGAGAACTGGCAGCCAAGGGCCCGGTA...CCCAGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp TGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAACGAAGATCGACGGGCTaGCCATCCACGTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: WGWDSCRNLLLVGARIPKRRSTG*PSTSAG
Trigger: ACCTGCAGACGTGGATGGGCAGCCCGTCGATCTTCG...TTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CCCGGCAGTGCCTCTTGCCTGTATGTGAGGAACGTGTGGGGACAGAGCAGGGAGCGCTGTAGTGCGAACTaGTTGAAGGACTTGACGATC +
Preference number: 4 (lower is better)
Translates to: PGSASCLYVRNVWGQSRERCSAN*LKDLTI
Trigger: GATCGTCAAGTCCTTCAAGCAGTTCGCACTACAGCG...CTCCCTGCTCTGTCCCCACACGTTCCTCACATACAGGCAAGAGGCACTGCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CACACCTGGAATGCGGTCAGCTGCTCGGCGAAGAACGGGCTGTGCCGAAACGCACGCTGTAGTGCGAACTaGTTGAAGGACTTGACGATC +
Preference number: 4 (lower is better)
Translates to: HTWNAVSCSAKNGLCRNARCSAN*LKDLTI
Trigger: GATCGTCAAGTCCTTCAAGCAGTTCGCACTACAGCG...TGCGTTTCGGCACAGCCCGTTCTTCGCCGAGCAGCTGACCGCATTCCAGGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR GCA 90 bp GATCCAGTTCAGTTCACCCAGGGGCGTCCTCCTGTCGTTCAGGCGGCCAGGGATGTGATTTGGGTTGATTaGAGCTACCTCCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: DPVQFTQGRPPVVQAARDVIWVD*SYLQLL
Trigger: CAGGAGCTGGAGGTAGCTGCAATCAACCCAAATCAC...ATCCCTGGCCGCCTGAACGACAGGAGGACGCCCCTGGGTGAACTGAACTGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR GCA 90 bp CGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCAGGCTGCCAGCTGGATaGAGTTTTTCATCGACGGAG +
Preference number: 4 (lower is better)
Translates to: RNLLLVGARIPKRSSGGARLPAG*SFSSTE
Trigger: CTCCGTCGATGAAAAACTGCATCCAGCTGGCAGCCT...GGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp GAGTTGCAGAGCTGTGAGGCTTCAGCCGGCCGCTGCTCCCGTGCAGTCCTAAAAAGGCTGCCAGCTGGATaGAGTTTTTCATCGACGGAG +
Preference number: 4 (lower is better)
Translates to: ELQSCEASAGRCSRAVLKRLPAG*SFSSTE
Trigger: CTCCGTCGATGAAAAACTGCATCCAGCTGGCAGCCT...TTTTAGGACTGCACGGGAGCAGCGGCCGGCTGAAGCCTCACAGCTCTGCAACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR GCA 90 bp CAGAGCTGTGAGGCTTCAGCCGGCCGCTGCTCCCGTGCAGTCCTAAAAGGCCCTAGACTGACACATTTCTaGATGCAAAACCAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: QSCEASAGRCSRAVLKGPRLTHF*MQNQRR
Trigger: CCTGCGCTGGTTTTGCATGCAGAAATGTGTCAGTCT...AGGGCCTTTTAGGACTGCACGGGAGCAGCGGCCGGCTGAAGCCTCACAGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR GCA 90 bp CCGGCAGGTTCACATCACTCTGGGGAGGAGGGCGGGGATACTCACGCTGTCCACAGACTGACACATTTCTaGATGCAAAACCAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: PAGSHHSGEEGGDTHAVHRLTHF*MQNQRR
Trigger: CCTGCGCTGGTTTTGCATGCAGAAATGTGTCAGTCT...GTGGACAGCGTGAGTATCCCCGCCCTCCTCCCCAGAGTGATGTGAACCTGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR GCA 90 bp TTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGATCCAAGCAAGTCCAATaGTCTCAGCCGGTGCACTTG +
Preference number: 4 (lower is better)
Translates to: FSAQTWGWDSCRNLLLVGSKQVQ*SQPVHL
Trigger: CAAGTGCACCGGCTGAGAGCATTGGACTTGCTTGGA...TCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp TGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAATCTCGGCTGACCGGCTaGTTGGCCACATCGTTGGTC +
Preference number: 4 (lower is better)
Translates to: WGWDSCRNLLLVGARIPKSRLTG*LATSLV
Trigger: GACCAACGATGTGGCCAAGCAGCCGGTCAGCCGAGA...TTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp TGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGGGTCGCAGAACCCCGTCTaGACCGTGGCGGAGATGAAA +
Preference number: 4 (lower is better)
Translates to: WLCSVCKTAHTRPAAPPGSQNPV*TVAEMK
Trigger: TTTCATCTCCGCCACGGTGCAGACGGGGTTCTGCGA...CCCAGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp TTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAAGTCCCAAAAGCAGATaGTGTCCTTGTCGGCTACGG +
Preference number: 4 (lower is better)
Translates to: FSAQTWGWDSCRNLLLVGSPKSR*CPCRLR
Trigger: CCGTAGCCGACAAGGACAGCATCTGCTTTTGGGACT...TCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp TTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGGGCGGTGGGGATGGGATTCGTaGCGGAACCTTCTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: LCSVCKTAHTRPAAPPGRWGWDS*RNLLLV
Trigger: CACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCA...CCGCCCAGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp TTCACCCAGGGGCGTCCTCCTGTCGTTCAGGCGGCCAGGGATCTTTTCTATCAAGTTGGGTCAAGGCTCTaGTTGTACCGGGCCGATCCA +
Preference number: 4 (lower is better)
Translates to: FTQGRPPVVQAARDLFYQVGSRL*LYRADP
Trigger: TGGATCGGCCCGGTACAAGCAGAGCCTTGACCCAAC...TTGATAGAAAAGATCCCTGGCCGCCTGAACGACAGGAGGACGCCCCTGGGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR GCA 90 bp CCGGGGGAGCACGTTCCACGCGATGGTGTCTGTGATGGCTGTGAAGATCCAGTTACTCACGCTGTCCACTaGGAGGATCTTGGCCCAGAT +
Preference number: 4 (lower is better)
Translates to: PGEHVPRDGVCDGCEDPVTHAVH*EDLGPD
Trigger: ATCTGGGCCAAGATCCTCGCAGTGGACAGCGTGAGT...AACTGGATCTTCACAGCCATCACAGACACCATCGCGTGGAACGTGCTCCCCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR GCA 90 bp TCTCTGGGAGCCCTGCATTTAGCTTCACTTGTTAATGCTACACGGGGTCCCCAAGGTGTGGGGCCTCCCTaGCCAGCTCCGTGCAATTCC +
Preference number: 4 (lower is better)
Translates to: SLGALHLASLVNATRGPQGVGPP*PAPCNS
Trigger: GGAATTGCACGGAGCTGGGCAGGGAGGCCCCACACC...TTGGGGACCCCGTGTAGCATTAACAAGTGAAGCTAAATGCAGGGCTCCCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CCA 90 bp ACCACAGGCCCAGCTGTCAGCCGAGGTCGCATCAGCATGGGCGGCTCAAGGCTGCTTTGCCCTCTGGTTTaGAGCTACAGTGAAACTCAT +
Preference number: 4 (lower is better)
Translates to: TTGPAVSRGRISMGGSRLLCPLV*SYSETH
Trigger: ATGAGTTTCACTGTAGCTCCAAACCAGAGGGCAAAG...CAGCCTTGAGCCGCCCATGCTGATGCGACCTCGGCTGACAGCTGGGCCTGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR CCA 90 bp ATGGTGAGCCACACCTGGAATGCGGTCAGCTGCTCGGCGAAGAACGGGCTGTGCACAATGTGGGCTTATTaGGTCATGGGAGCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: MVSHTWNAVSCSAKNGLCTMWAY*VMGALP
Trigger: GGGCAAAGCTCCCATGACCCAATAAGCCCACATTGT...GCACAGCCCGTTCTTCGCCGAGCAGCTGACCGCATTCCAGGTGTGGCTCACCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CCA 90 bp TTGTGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGGGGCCGCTAGGAAATaGGGCAGCCCAAGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: LWLCSVCKTAHTRPAAPPGAARK*GSPRSS
Trigger: GGAGCTTCTTGGGCTGCCCCATTTCCTAGCGGCCCC...AGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR CCA 90 bp AGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACCCGGGTAAATTTGCACCGATaGTTTCCAGAGCTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: RSHQHGRLKAGDGAGVTRVNLHR*FPELSE
Trigger: CTCAGAAAGCTCTGGAAACCATCGGTGCAAATTTAC...CCGGGTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp CTCCCGAGTTGCAGAGCTGTGAGGCTTCAGCCGGCCGCTGCTCCCGTGCAGTCCGTAAATTTGCACCGATaGTTTCCAGAGCTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: LPSCRAVRLQPAAAPVQSVNLHR*FPELSE
Trigger: CTCAGAAAGCTCTGGAAACCATCGGTGCAAATTTAC...GGACTGCACGGGAGCAGCGGCCGGCTGAAGCCTCACAGCTCTGCAACTCGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CCA 90 bp AGCTCCGTGCAATTCCATGACATCACAGTGCCACGGAGGGCGGGGGAGCACGGCGACTTCATCCACAGTTaGGTCAAGGCTCTGCTTGTA +
Preference number: 4 (lower is better)
Translates to: SSVQFHDITVPRRAGEHGDFIHS*VKALLV
Trigger: TACAAGCAGAGCCTTGACCCAACTGTGGATGAAGTC...GCCGTGCTCCCCCGCCCTCCGTGGCACTGTGATGTCATGGAATTGCACGGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CCA 90 bp TGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAGGACTCGCTCCTCCTTaGCGTTGCGACGTAAGGACG +
Preference number: 4 (lower is better)
Translates to: WGWDSCRNLLLVGARIPKGLAPP*RCDVRT
Trigger: CGTCCTTACGTCGCAACGCCAAGGAGGAGCGAGTCC...TTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp CATCACAGTGCCACGGAGGGCGGGGGAGCACGGCACCTGGAGGATCCTGAAACATCTGCAGGTCATATATaGACAGAGGGATGTACTGCG +
Preference number: 4 (lower is better)
Translates to: HHSATEGGGARHLEDPETSAGHI*TEGCTA
Trigger: CGCAGTACATCCCTCTGTCCATATATGACCTGCAGA...TGTTTCAGGATCCTCCAGGTGCCGTGCTCCCCCGCCCTCCGTGGCACTGTGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CCA 90 bp GCTTCAGCCGGCCGCTGCTCCCGTGCAGTCCTAAAAGGCCCTCCAAGGCTTCTGAGCAAGAGGGTGATTTaGGTTGATTGCAGCTACCTC +
Preference number: 4 (lower is better)
Translates to: ASAGRCSRAVLKGPPRLLSKRVI*VDCSYL
Trigger: GAGGTAGCTGCAATCAACCCAAATCACCCTCTTGCT...CAGAAGCCTTGGAGGGCCTTTTAGGACTGCACGGGAGCAGCGGCCGGCTGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CCA 90 bp AAGGTTAGAAACTCTCTTGCAAAGTGCTACCCTCCCGAGTTGCAGAGCTGTGAGTGGGCAGCAGCTCGGTaGCCTCGCAGGCTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: KVRNSLAKCYPPELQSCEWAAAR*PRRLPA
Trigger: AGCTGGCAGCCTGCGAGGCCACCGAGCTGCTGCCCA...CTCACAGCTCTGCAACTCGGGAGGGTAGCACTTTGCAAGAGAGTTTCTAACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CCA 90 bp CGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCTGTCTGAAGAGCTTTTaGAAGAGATCCCGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: RNLLLVGARIPKRSSGGACLKSF*KRSRGS
Trigger: GCTCCCCCGGGATCTCTTCCAAAAGCTCTTCAGACA...GGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGATGTCTGAAGAGCTTTTaGAAGAGATCCCGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: FSAQTWGWDSCRNLLLVGCLKSF*KRSRGS
Trigger: GCTCCCCCGGGATCTCTTCCAAAAGCTCTTCAGACA...TCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp ATTGTGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCGGTCCGGTGTTCAGCTaGCATGTAGGGGTCCGCCAG +
Preference number: 4 (lower is better)
Translates to: IVVVFCLQNCSYTPCGPSGPVFS*HVGVRQ
Trigger: CTGGCGGACCCCTACATGCCAGCTGAACACCGGACC...GGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCACAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR CCA 90 bp TCCAGACACGACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTGCCGTATCATGGCCACGTTGTaGTCGATGGTGGTGGAGTGG +
Preference number: 4 (lower is better)
Translates to: SRHDSEDRQKRVAGPSCRIMATL*SMVVEW
Trigger: CCACTCCACCACCATCGACCACAACGTGGCCATGAT...ACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTCGTGTCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR CCA 90 bp GACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTGCCGTCATCAGCAGCAGGTCGTGCTCTTCTaGGATCTTCATGACGGGCTG +
Preference number: 4 (lower is better)
Translates to: DSEDRQKRVAGPSCRHQQQVVLF*DLHDGL
Trigger: CAGCCCGTCATGAAGATCCCAGAAGAGCACGACCTG...CTGCTGATGACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAGGGAAAGGAGCCCCGTaGATTAAGGCAGGGGCTACC +
Preference number: 4 (lower is better)
Translates to: WGWDSCRNLLLVGARIPKGKGAP*IKAGAT
Trigger: GGTAGCCCCTGCCTTAATCCACGGGGCTCCTTTCCC...TTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR CAA 72 bp GTTAGAAACTCTCTTGCAAAGTGCTACCCTCCCGAGTaGCAGAGCTGTGAGGCTTCAGCCGGCCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VRNSLAKCYPPE*QSCEASAGRCS
Trigger: GGAGCAGCGGCCGGCTGAAGCCTCACAGCTCTGCAACTCGGGAGGGTAGCACTTTGCAAGAGAGTTTCTAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR TCA 90 bp CCCCAGCTGGCTAGGAAATGTCCCTGCTTGCGTGCACTGACTGTGAGAGGTGGTGTTTCCAGAGCTTTCTaGGGACCCATCGACAGAGGA +
Preference number: 4 (lower is better)
Translates to: PQLARKCPCLRALTVRGGVSRAF*GPIDRG
Trigger: TCCTCTGTCGATGGGTCCTCAGAAAGCTCTGGAAAC...ACCACCTCTCACAGTCAGTGCACGCAAGCAGGGACATTTCCTAGCCAGCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp TCCAGACACGACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTGCCGTCGCCAGGCACCAGACTaGCACATTTCTGCATGCAAA +
Preference number: 4 (lower is better)
Translates to: SRHDSEDRQKRVAGPSCRRQAPD*HISACK
Trigger: TTTGCATGCAGAAATGTGTCAGTCTGGTGCCTGGCG...ACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTCGTGTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp TTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAATGATCGTCGGCAGCTaGGACAGACAGATGTCAACA +
Preference number: 4 (lower is better)
Translates to: FSAQTWGWDSCRNLLLVGMIVGS*DRQMST
Trigger: TGTTGACATCTGTCTGTCTCAGCTGCCGACGATCAT...TCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp GACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTGCCGTCATCAGCAGTCTGCAAAGATTTGTTaGGGCTCCTGGCTGTGGCGA +
Preference number: 4 (lower is better)
Translates to: DSEDRQKRVAGPSCRHQQSAKIC*GSWLWR
Trigger: TCGCCACAGCCAGGAGCCTCAACAAATCTTTGCAGA...CTGCTGATGACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp GACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTGCCGTCATCAGCAGCTTCTGGGATCTTCATaGCGGGCTGGGCAAAATAGC +
Preference number: 4 (lower is better)
Translates to: DSEDRQKRVAGPSCRHQQLLGSS*RAGQNS
Trigger: GCTATTTTGCCCAGCCCGTCATGAAGATCCCAGAAG...CTGCTGATGACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp ATTGTGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCGCCAGCCACGATGAGTaGGCGGTGGGAATCACAGGA +
Preference number: 4 (lower is better)
Translates to: IVVVFCLQNCSYTPCGPSASHDE*AVGITG
Trigger: TCCTGTGATTCCCACCGCTCACTCATCGTGGCTGGC...GGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCACAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp TGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAGCTGACAGCTCTGTGTaGGAGGGGCCAAAACTGGAG +
Preference number: 4 (lower is better)
Translates to: WGWDSCRNLLLVGARIPKADSSV*EGPKLE
Trigger: CTCCAGTTTTGGCCCCTCTCACACAGAGCTGTCAGC...TTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp GATCCAGTTCAGTTCACCCAGGGGCGTCCTCCTGTCGTTCAGGCGGCCAGGGATCAAATGGATAAAGAGTaGGGAGACCCTTACTCAGGC +
Preference number: 4 (lower is better)
Translates to: DPVQFTQGRPPVVQAARDQMDKE*GDPYSG
Trigger: GCCTGAGTAAGGGTCTCCGCACTCTTTATCCATTTG...ATCCCTGGCCGCCTGAACGACAGGAGGACGCCCCTGGGTGAACTGAACTGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR GCA 90 bp CGGGGGAGCACGTTCCACGCGATGGTGTCTGTGATGGCTGTGAAGATCCAGTTCAGGCTGCCAGCTGGATaGAGTTTTTCATCGACGGAG +
Preference number: 4 (lower is better)
Translates to: RGSTFHAMVSVMAVKIQFRLPAG*SFSSTE
Trigger: CTCCGTCGATGAAAAACTGCATCCAGCTGGCAGCCT...GAACTGGATCTTCACAGCCATCACAGACACCATCGCGTGGAACGTGCTCCCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR GCA 90 bp TGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGGGTGGCTTAACAGCACCTaGAGGACGATGGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: WLCSVCKTAHTRPAAPPGWLNST*RTMGSC
Trigger: ACAGCTGCCCATCGTCCTGCAGGTGCTGTTAAGCCA...CCCAGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp GGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAATCCTCTCTGCAGAGTTaGCCACGAACGTGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: GDGIRAGTFFWWELAFQKSSLQS*PRTCQG
Trigger: CCCTTGGCACGTTCGTGGGCAACTCTGCAGAGAGGA...TTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR GCA 90 bp CAAAAAGGAGCAGCGGAGGGGCCGCCTCTGTCCTGCCTTGTCACGTCCCGGCCAGTCAAACTCAGGTTCTaGAAAGATTTGTTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: QKGAAEGPPLSCLVTSRPVKLRF*KDLLRL
Trigger: GAGCCTCAACAAATCTTTGCAGAACCTGAGTTTGAC...TGGCCGGGACGTGACAAGGCAGGACAGAGGCGGCCCCTCCGCTGCTCCTTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp TTGTGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTACCACCCAGGCTGTGTaGTCCCGGTACGTCATGACG +
Preference number: 4 (lower is better)
Translates to: LWLCSVCKTAHTRPAAPPTTQAV*SRYVMT
Trigger: CGTCATGACGTACCGGGAGCACACAGCCTGGGTGGT...AGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp TCCAGACACGACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTGCCGTATCTGCACATGCGTGTaGTACACCTGTGTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: SRHDSEDRQKRVAGPSCRICTCV*YTCVRA
Trigger: TGCCCTCACACAGGTGTAGCACACGCATGTGCAGAT...ACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTCGTGTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp ATTGTGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCCATCCACCCAGAAGATaGTCTTGGCCACGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: IVVVFCLQNCSYTPCGPSHPPRR*SWPRQA
Trigger: GGCCTGCCGTGGCCAAGAGCATCTTCTGGGTGGATG...GGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCACAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp GAAACTCTCTTGCAAAGTGCTACCCTCCCGAGTTGCAGAGCTGTGAGGCTTCAGCAGGTCCCAAGCCACTaGCTGCTCCTGAGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: ETLLQSATLPSCRAVRLQQVPSH*LLLRLY
Trigger: GTACAGCCTCAGGAGCAGCCAGTGGCTTGGGACCTG...CTGAAGCCTCACAGCTCTGCAACTCGGGAGGGTAGCACTTTGCAAGAGAGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CCA 90 bp GGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAACTTGTACCGGGCCCTTaGCTGCCAGTTCTCGTACTG +
Preference number: 4 (lower is better)
Translates to: GDGIRAGTFFWWELAFQKLVPGP*LPVLVL
Trigger: CAGTACGAGAACTGGCAGCCAAGGGCCCGGTACAAG...TTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp CCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCAGACTTCATCCACAGTTaGGTCAAGGCTCTGCTTGTA +
Preference number: 4 (lower is better)
Translates to: PRRGDGIRAGTFFWWELADFIHS*VKALLV
Trigger: TACAAGCAGAGCCTTGACCCAACTGTGGATGAAGTC...TGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TGCATGTACGTGGGCGGCAGACGCGGGCTGCTGACGGGAGTGCAGTTATACGACTCTGCAGGTCATATATaGACAGAGGGATGTACTGCG +
Preference number: 4 (lower is better)
Translates to: CMYVGGRRGLLTGVQLYDSAGHI*TEGCTA
Trigger: CGCAGTACATCCCTCTGTCCATATATGACCTGCAGA...GTCGTATAACTGCACTCCCGTCAGCAGCCCGCGTCTGCCGCCCACGTACATGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CCA 90 bp GAGTTGCAGAGCTGTGAGGCTTCAGCCGGCCGCTGCTCCCGTGCAGTCCTAAAACGATCAAGCCAGCATTaGAGCAGTCGTAGACGAAGA +
Preference number: 4 (lower is better)
Translates to: ELQSCEASAGRCSRAVLKRSSQH*SSRRRR
Trigger: TCTTCGTCTACGACTGCTCCAATGCTGGCTTGATCG...TTTTAGGACTGCACGGGAGCAGCGGCCGGCTGAAGCCTCACAGCTCTGCAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CCA 90 bp ATGGTGAGCCACACCTGGAATGCGGTCAGCTGCTCGGCGAAGAACGGGCTGTGCAGCAAGAGGGTGATTTaGGTTGATTGCAGCTACCTC +
Preference number: 4 (lower is better)
Translates to: MVSHTWNAVSCSAKNGLCSKRVI*VDCSYL
Trigger: GAGGTAGCTGCAATCAACCCAAATCACCCTCTTGCT...GCACAGCCCGTTCTTCGCCGAGCAGCTGACCGCATTCCAGGTGTGGCTCACCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CCA 90 bp TCCAGACACGACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTGCCGTAGAAGCGAGCAGTCCTaGCCGTTCAGATACTCCATG +
Preference number: 4 (lower is better)
Translates to: SRHDSEDRQKRVAGPSCRRSEQS*PFRYSM
Trigger: CATGGAGTATCTGAACGGCCAGGACTGCTCGCTTCT...ACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTCGTGTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGGGGCCGGAACCTTCTTCTaGTGGGAGCTCGCATTCCAA +
Preference number: 4 (lower is better)
Translates to: WLCSVCKTAHTRPAAPPGAGTFF*WELAFQ
Trigger: TTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCGGC...CCCAGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp GAGCAGCCCTTCGGAGGGAAAGGAGCCCCGTGGATTAAGGCAGGGGCTACCTCGCGTGTTGTTTACTGTTaGTCACTCTCTGCTCTTAGC +
Preference number: 4 (lower is better)
Translates to: EQPFGGKGAPWIKAGATSRVVYC*SLSALS
Trigger: GCTAAGAGCAGAGAGTGACCAACAGTAAACAACACG...CGAGGTAGCCCCTGCCTTAATCCACGGGGCTCCTTTCCCTCCGAAGGGCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp TCCCGCTGTAGTGCGAACTGCTTGAAGGACTTGACGATCAAGCCAGCATTGGAGCCTGAGAACGAGTCCTaGGAAACGGGCGACACGGAA +
Preference number: 4 (lower is better)
Translates to: SRCSANCLKDLTIKPALEPENES*ETGDTE
Trigger: TTCCGTGTCGCCCGTTTCTCAGGACTCGTTCTCAGG...CTCCAATGCTGGCTTGATCGTCAAGTCCTTCAAGCAGTTCGCACTACAGCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR TCA 90 bp AGTTCACCCAGGGGCGTCCTCCTGTCGTTCAGGCGGCCAGGGATCTTTTCTATCACGTGCAGAGCTTCTTaGCTTCATCCACAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: SSPRGVLLSFRRPGIFSITCRAS*LHPQLG
Trigger: ACCCAACTGTGGATGAAGTCAAGAAGCTCTGCACGT...GATAGAAAAGATCCCTGGCCGCCTGAACGACAGGAGGACGCCCCTGGGTGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR TCA 90 bp GGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGCGTGTAGTTCTTGTTaGAGACCCAGACCTCCCCGT +
Preference number: 4 (lower is better)
Translates to: GDGIRAGTFFWWELAFQKACSSC*RPRPPR
Trigger: ACGGGGAGGTCTGGGTCTTCAACAAGAACTACACGC...TTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp TCCAGACACGACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTGCCGTTGTAGGCGATGCTGTTaGGTACTTTCATGGCCACGT +
Preference number: 4 (lower is better)
Translates to: SRHDSEDRQKRVAGPSCRCRRCC*VLSWPR
Trigger: ACGTGGCCATGAAAGTACTCAACAGCATCGCCTACA...ACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTCGTGTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp CAAAAAGGAGCAGCGGAGGGGCCGCCTCTGTCCTGCCTTGTCACGTCCCGGCCACTGCAGCTAATGCTCTaGTTACATGGAAATAAAGTG +
Preference number: 4 (lower is better)
Translates to: QKGAAEGPPLSCLVTSRPLQLML*LHGNKV
Trigger: CACTTTATTTCCATGTAATCAGAGCATTAGCTGCAG...TGGCCGGGACGTGACAAGGCAGGACAGAGGCGGCCCCTCCGCTGCTCCTTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp CGCAGCAGCCGACGCCCCGTGCCCCGGCGAGTGACAGCTTCACTATGTACAGCACTGCAGCTAATGCTCTaGTTACATGGAAATAAAGTG +
Preference number: 4 (lower is better)
Translates to: RSSRRPVPRRVTASLCTALQLML*LHGNKV
Trigger: CACTTTATTTCCATGTAATCAGAGCATTAGCTGCAG...TGCTGTACATAGTGAAGCTGTCACTCGCCGGGGCACGGGGCGTCGGCTGCTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp ACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCGCCTGTGTTGGGTAAGAATTaGGTTGAAGGACTGGATGGG +
Preference number: 4 (lower is better)
Translates to: TFFWWELAFQKGAAEGPPVLGKN*VEGLDG
Trigger: CCCATCCAGTCCTTCAACTCAATTCTTACCCAACAC...AGGCGGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp GAGCAGCCCTTCGGAGGGAAAGGAGCCCCGTGGATTAAGGCAGGGGCTACCTCGTGGTTGTGTTCTGTTTaGAAAACTGCTCATACACGC +
Preference number: 4 (lower is better)
Translates to: EQPFGGKGAPWIKAGATSWLCSV*KTAHTR
Trigger: GCGTGTATGAGCAGTTTTGCAAACAGAACACAACCA...CGAGGTAGCCCCTGCCTTAATCCACGGGGCTCCTTTCCCTCCGAAGGGCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CCGTGGTCGTGGGCCTCTCACCGCCAGAATGAAGCCACCTGGCTCCTTCACCTCTGGTTGTGTTCTGTTTaGAAAACTGCTCATACACGC +
Preference number: 4 (lower is better)
Translates to: PWSWASHRQNEATWLLHLWLCSV*KTAHTR
Trigger: GCGTGTATGAGCAGTTTTGCAAACAGAACACAACCA...GAGGTGAAGGAGCCAGGTGGCTTCATTCTGGCGGTGAGAGGCCCACGACCACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp GATCCAGTTCAGTTCACCCAGGGGCGTCCTCCTGTCGTTCAGGCGGCCAGGGATCTTTGCCCTCTGGTTTaGAGCTACAGTGAAACTCAT +
Preference number: 4 (lower is better)
Translates to: DPVQFTQGRPPVVQAARDLCPLV*SYSETH
Trigger: ATGAGTTTCACTGTAGCTCCAAACCAGAGGGCAAAG...ATCCCTGGCCGCCTGAACGACAGGAGGACGCCCCTGGGTGAACTGAACTGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CCA 90 bp TTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGGGCGGGGGAGCTTTGCCCTCTaGTTTGGAGCTACAGTGAAA +
Preference number: 4 (lower is better)
Translates to: LCSVCKTAHTRPAAPPGRGSFAL*FGATVK
Trigger: TTTCACTGTAGCTCCAAACCAGAGGGCAAAGCTCCC...CCGCCCAGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR CCA 90 bp CTACTGGTTTCTAAAAGGTTAGAAACTCTCTTGCAAAGTGCTACCCTCCCGAGTCAGGTCCGCGCGGCCTaGCTGGTCCTGGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LLVSKRLETLLQSATLPSQVRAA*LVLAFS
Trigger: GCTGAAGGCCAGGACCAGCCAGGCCGCGCGGACCTG...ACTCGGGAGGGTAGCACTTTGCAAGAGAGTTTCTAACCTTTTAGAAACCAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CCA 90 bp ACCACAGGCCCAGCTGTCAGCCGAGGTCGCATCAGCATGGGCGGCTCAAGGCTGAAATCGAAAACCAAATaGATAAAGAGTGCGGAGACC +
Preference number: 4 (lower is better)
Translates to: TTGPAVSRGRISMGGSRLKSKTK*IKSAET
Trigger: GGTCTCCGCACTCTTTATCCATTTGGTTTTCGATTT...CAGCCTTGAGCCGCCCATGCTGATGCGACCTCGGCTGACAGCTGGGCCTGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp CGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCTCTGCAGGTCATATATaGACAGAGGGATGTACTGCG +
Preference number: 4 (lower is better)
Translates to: RNLLLVGARIPKRSSGGASAGHI*TEGCTA
Trigger: CGCAGTACATCCCTCTGTCCATATATGACCTGCAGA...GGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAGTCCGCAGTCTGCTCTaGGCCCTTGTCGAACATCTT +
Preference number: 4 (lower is better)
Translates to: WGWDSCRNLLLVGARIPKVRSLL*ALVEHL
Trigger: AAGATGTTCGACAAGGGCCCAGAGCAGACTGCGGAC...TTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp GCCGAGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACCTGTTCAGAAATATTTaGTCGTCCAATCTCGTAATG +
Preference number: 4 (lower is better)
Translates to: AEVASAWAAQGWRRGWCHLFRNI*SSNLVM
Trigger: CATTACGAGATTGGACGACCAAATATTTCTGAACAG...GTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp ACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCGCCTGGAACCTTCTTCTGGTaGGAGCTCGCATTCCAAAAA +
Preference number: 4 (lower is better)
Translates to: TFFWWELAFQKGAAEGPPGTFFW*ELAFQK
Trigger: TTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCC...AGGCGGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp CCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCACGTGTTGTTTACTGTTaGTCACTCTCTGCTCTTAGC +
Preference number: 4 (lower is better)
Translates to: PRRGDGIRAGTFFWWELARVVYC*SLSALS
Trigger: GCTAAGAGCAGAGAGTGACCAACAGTAAACAACACG...TGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp GGGGAGCACGTTCCACGCGATGGTGTCTGTGATGGCTGTGAAGATCCAGTTCAGGGTTTGGAGCTACAGTaGAACTCATCTCATCAGCCC +
Preference number: 4 (lower is better)
Translates to: GEHVPRDGVCDGCEDPVQGLELQ*NSSHQP
Trigger: GGGCTGATGAGATGAGTTTCACTGTAGCTCCAAACC...CTGAACTGGATCTTCACAGCCATCACAGACACCATCGCGTGGAACGTGCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR TCA 90 bp CTGTTCGGGTGGGTTTCGGTTCTCCACGCCCATGGTGAGCCACACCTGGAATGCAAACTAAGGCAACACTaGCTGTCTTCATCCGATCCT +
Preference number: 4 (lower is better)
Translates to: LFGWVSVLHAHGEPHLECKLRQH*LSSSDP
Trigger: AGGATCGGATGAAGACAGTCAGTGTTGCCTTAGTTT...GCATTCCAGGTGTGGCTCACCATGGGCGTGGAGAACCGAAACCCACCCGAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR TCA 90 bp TTCTCACTACTGGTTTCTAAAAGGTTAGAAACTCTCTTGCAAAGTGCTACCCTCCCCAGACCTCCCCGTTaGCTGTGGGCCGGGGCACCC +
Preference number: 4 (lower is better)
Translates to: FSLLVSKRLETLLQSATLPRPPR*LWAGAP
Trigger: GGGTGCCCCGGCCCACAGTCAACGGGGAGGTCTGGG...GAGGGTAGCACTTTGCAAGAGAGTTTCTAACCTTTTAGAAACCAGTAGTGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR TCA 90 bp TTGTGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGCGTGTAGTTCTTGTTaGAGACCCAGACCTCCCCGT +
Preference number: 4 (lower is better)
Translates to: LWLCSVCKTAHTRPAAPPACSSC*RPRPPR
Trigger: ACGGGGAGGTCTGGGTCTTCAACAAGAACTACACGC...AGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp GAAACTCTCTTGCAAAGTGCTACCCTCCCGAGTTGCAGAGCTGTGAGGCTTCAGGCGTGTAGTTCTTGTTaGAGACCCAGACCTCCCCGT +
Preference number: 4 (lower is better)
Translates to: ETLLQSATLPSCRAVRLQACSSC*RPRPPR
Trigger: ACGGGGAGGTCTGGGTCTTCAACAAGAACTACACGC...CTGAAGCCTCACAGCTCTGCAACTCGGGAGGGTAGCACTTTGCAAGAGAGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR TCA 90 bp GGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAAATTCTTCCAGACCCTaGTGGCACCATCGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: GDGIRAGTFFWWELAFQKNSSRP*WHHRLW
Trigger: CCACAGACGATGGTGCCATCAGGGTCTGGAAGAATT...TTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCC
54% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp TTGTGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGGCTGCGAGGGGAGCTaGCAAAAGCGTAAGAGACTT +
Preference number: 4 (lower is better)
Translates to: LWLCSVCKTAHTRPAAPPGCEGS*QKRKRL
Trigger: AAGTCTCTTACGCTTTTGGCAGCTCCCCTCGCAGCC...AGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR GCA 90 bp TCTCTGGGAGCCCTGCATTTAGCTTCACTTGTTAATGCTACACGGGGTCCCCAATACCGGGCCCTTGGCTaGCAGTTCTCGTACTGCTTC +
Preference number: 4 (lower is better)
Translates to: SLGALHLASLVNATRGPQYRALG*QFSYCF
Trigger: GAAGCAGTACGAGAACTGGCAGCCAAGGGCCCGGTA...TTGGGGACCCCGTGTAGCATTAACAAGTGAAGCTAAATGCAGGGCTCCCAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR GCA 90 bp TGGAGATCTCTGGGAGCCCTGCATTTAGCTTCACTTGTTAATGCTACACGGGGTCGAAGATCGACGGGCTaGCCATCCACGTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: WRSLGALHLASLVNATRGRRSTG*PSTSAG
Trigger: ACCTGCAGACGTGGATGGGCAGCCCGTCGATCTTCG...ACCCCGTGTAGCATTAACAAGTGAAGCTAAATGCAGGGCTCCCAGAGATCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR GCA 90 bp TGCGAACTGCTTGAAGGACTTGACGATCAAGCCAGCATTGGAGCAGTCGTAGACGGTGGCCTCGCAGGCTaGCAGCTGGATGCAGTTTTT +
Preference number: 4 (lower is better)
Translates to: CELLEGLDDQASIGAVVDGGLAG*QLDAVF
Trigger: AAAAACTGCATCCAGCTGGCAGCCTGCGAGGCCACC...GTCTACGACTGCTCCAATGCTGGCTTGATCGTCAAGTCCTTCAAGCAGTTCGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR GCA 90 bp AGTCGTAGACGAAGATCGACGGGCTGCCCATCCACGTCTGCAGGTCATATATGGTCCAAGCAAGTCCAATaGTCTCAGCCGGTGCACTTG +
Preference number: 4 (lower is better)
Translates to: SRRRRSTGCPSTSAGHIWSKQVQ*SQPVHL
Trigger: CAAGTGCACCGGCTGAGAGCATTGGACTTGCTTGGA...CCATATATGACCTGCAGACGTGGATGGGCAGCCCGTCGATCTTCGTCTACGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR GCA 90 bp CTCAAAACAAACAGAAACGCGTGTTGGGTAAGAATTGAGTTGAAGGACTGGATGGTGTCCAGGACGCGCTaGGGCCGGGCGTTCACGGTG +
Preference number: 4 (lower is better)
Translates to: LKTNRNACWVRIELKDWMVSRTR*GRAFTV
Trigger: CACCGTGAACGCCCGGCCGCAGCGCGTCCTGGACAC...CATCCAGTCCTTCAACTCAATTCTTACCCAACACGCGTTTCTGTTTGTTTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp TGTTGGTCACTCTCTGCTCTTAGCTTCACATTACCATTTCGTGTTTTGTCAAAGCAGCGGGGCCTGTGGTaGCCGGCCGGCCAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: CWSLSALSFTLPFRVLSKQRGLW*PAGQKA
Trigger: TGCCTTCTGGCCGGCCGGGCACCACAGGCCCCGCTG...CTTTGACAAAACACGAAATGGTAATGTGAAGCTAAGAGCAGAGAGTGACCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp GCAAAGAGAGTGTACCTATTTATGCAGCGTACTTGGATGTTCACAGAAAAGACACAGCGGGGCCTGTGGTaGCCGGCCGGCCAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: AKRVYLFMQRTWMFTEKTQRGLW*PAGQKA
Trigger: TGCCTTCTGGCCGGCCGGGCACCACAGGCCCCGCTG...TGTCTTTTCTGTGAACATCCAAGTACGCTGCATAAATAGGTACACTCTCTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS-3UTR GCA 90 bp ATTGTGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCATGACTTGCTGGGCCTaGCTCCTGACACGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: IVVVFCLQNCSYTPCGPSMTCWA*LLTRLF
Trigger: AAACAGCCGTGTCAGGAGGCAGGCCCAGCAAGTCAT...GGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TTCAGCCGGCCGCTGCTCCCGTGCAGTCCTAAAAGGCCCTCCAAGGCTTCTGCCTCTGAGCTAAGGATTTaGAGCCTTCAATTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: FSRPLLPCSPKRPSKASASELRI*SLQFSH
Trigger: GTGAGAAAATTGAAGGCTCCAAATCCTTAGCTCAGA...GGCAGAAGCCTTGGAGGGCCTTTTAGGACTGCACGGGAGCAGCGGCCGGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CCA 90 bp TCGGTTCTCCACGCCCATGGTGAGCCACACCTGGAATGCGGTCAGCTGCTCGGCTCTGAGCTAAGGATTTaGAGCCTTCAATTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: SVLHAHGEPHLECGQLLGSELRI*SLQFSH
Trigger: GTGAGAAAATTGAAGGCTCCAAATCCTTAGCTCAGA...GCCGAGCAGCTGACCGCATTCCAGGTGTGGCTCACCATGGGCGTGGAGAACCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CCA 90 bp GGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAATCGCAGGCTGCCAGCTaGATGCAGTTTTTCATCGAC +
Preference number: 4 (lower is better)
Translates to: GDGIRAGTFFWWELAFQKSQAAS*MQFFID
Trigger: GTCGATGAAAAACTGCATCCAGCTGGCAGCCTGCGA...TTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAATCGCAGGCTGCCAGCTaGATGCAGTTTTTCATCGAC +
Preference number: 4 (lower is better)
Translates to: WGWDSCRNLLLVGARIPKSQAAS*MQFFID
Trigger: GTCGATGAAAAACTGCATCCAGCTGGCAGCCTGCGA...TTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGGGCGCGGTCACCATCTCTaGGTTCTTTTCCAAATCAGC +
Preference number: 4 (lower is better)
Translates to: WLCSVCKTAHTRPAAPPGRGHHL*VLFQIS
Trigger: GCTGATTTGGAAAAGAACCCAGAGATGGTGACCGCG...CCCAGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp ATTGTGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTATGTGAGGAACGTGTaGGGACAGAGCAGGGAGACC +
Preference number: 4 (lower is better)
Translates to: IVVVFCLQNCSYTPCGPSYVRNV*GQSRET
Trigger: GGTCTCCCTGCTCTGTCCCCACACGTTCCTCACATA...GGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TCTCTGGGAGCCCTGCATTTAGCTTCACTTGTTAATGCTACACGGGGTCCCCAAGGGGAGCACGGCACCTaGAGGATCCTGAAACACTCA +
Preference number: 4 (lower is better)
Translates to: SLGALHLASLVNATRGPQGEHGT*RILKHS
Trigger: TGAGTGTTTCAGGATCCTCCAGGTGCCGTGCTCCCC...TTGGGGACCCCGTGTAGCATTAACAAGTGAAGCTAAATGCAGGGCTCCCAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR TCA 90 bp CTGCATTTAGCTTCACTTGTTAATGCTACACGGGGTCCCCAAGTTAGGTGTGGGCCTGAGAACGAGTCCTaGGAAACGGGCGACACGGAA +
Preference number: 4 (lower is better)
Translates to: LHLASLVNATRGPQVRCGPENES*ETGDTE
Trigger: TTCCGTGTCGCCCGTTTCTCAGGACTCGTTCTCAGG...CCCACACCTAACTTGGGGACCCCGTGTAGCATTAACAAGTGAAGCTAAATGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR TCA 90 bp AGATCTCTGGGAGCCCTGCATTTAGCTTCACTTGTTAATGCTACACGGGGTCCCAGGCTCTCTCCTGCCTaGGAACGAGTCCTGAGAAAC +
Preference number: 4 (lower is better)
Translates to: RSLGALHLASLVNATRGPRLSPA*ERVLRN
Trigger: GTTTCTCAGGACTCGTTCTCAGGCAGGAGAGAGCCT...GGGACCCCGTGTAGCATTAACAAGTGAAGCTAAATGCAGGGCTCCCAGAGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR TCA 90 bp GGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAATTCATCCTCCAGCTCTaGGCTAAGGATTTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: GDGIRAGTFFWWELAFQKFILQL*AKDLEP
Trigger: AGGCTCCAAATCCTTAGCTCAGAGCTGGAGGATGAA...TTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp TGTTGGTCACTCTCTGCTCTTAGCTTCACATTACCATTTCGTGTTTTGTCAAAGCGGGGGCCGACTGCGTaGGGGAGGAGGTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: CWSLSALSFTLPFRVLSKRGPTA*GRRCPG
Trigger: TCCTGGACACCTCCTCCCTCACGCAGTCGGCCCCCG...CTTTGACAAAACACGAAATGGTAATGTGAAGCTAAGAGCAGAGAGTGACCAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp AGAGAGTGTACCTATTTATGCAGCGTACTTGGATGTTCACAGAAAAGACAACACCGGGGGCCGACTGCGTaGGGGAGGAGGTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RECTYLCSVLGCSQKRQHRGPTA*GRRCPG
Trigger: TCCTGGACACCTCCTCCCTCACGCAGTCGGCCCCCG...GTGTTGTCTTTTCTGTGAACATCCAAGTACGCTGCATAAATAGGTACACTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS-3UTR TCA 90 bp ATTGTGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCAATTCTTCCAGACCCTaGTGGCACCATCGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: IVVVFCLQNCSYTPCGPSNSSRP*WHHRLW
Trigger: CCACAGACGATGGTGCCATCAGGGTCTGGAAGAATT...GGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp CGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCTACATGGAAATAAAGTaGGGTGTTTCCCCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: RNLLLVGARIPKRSSGGAYMEIK*GVSPFS
Trigger: GCTGAAAGGGGAAACACCTCACTTTATTTCCATGTA...GGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp CAGGTCATATATGGACAGAGGGATGTACTGCGTGTAGTTCTTGTTGAAGACCCAGACAGGACAGGTAGGTaGCAGCCCCCACGACCCAGA +
Preference number: 4 (lower is better)
Translates to: QVIYGQRDVLRVVLVEDPDRTGR*QPPRPR
Trigger: TCTGGGTCGTGGGGGCTGTCACCTACCTGTCCTGTC...TGGGTCTTCAACAAGAACTACACGCAGTACATCCCTCTGTCCATATATGACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR GCA 90 bp CTGCATTTAGCTTCACTTGTTAATGCTACACGGGGTCCCCAAGTTAGGTGTGGGGCTCCTCCTTGGCGTTaGGACGTAAGGACGTGCAGA +
Preference number: 4 (lower is better)
Translates to: LHLASLVNATRGPQVRCGAPPWR*DVRTCR
Trigger: TCTGCACGTCCTTACGTCGCAACGCCAAGGAGGAGC...CCCACACCTAACTTGGGGACCCCGTGTAGCATTAACAAGTGAAGCTAAATGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR GCA 90 bp ATCAAATCCAGTGTGACGCCAGGCACCAGACTGACACATTTCTGCATGCAAAACTGGAATGCGGTCAGCTaGTCGGCGAAGAACGGGCTG +
Preference number: 4 (lower is better)
Translates to: IKSSVTPGTRLTHFCMQNWNAVS*SAKNGL
Trigger: CAGCCCGTTCTTCGCCGAGCAGCTGACCGCATTCCA...GTTTTGCATGCAGAAATGTGTCAGTCTGGTGCCTGGCGTCACACTGGATTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR GCA 90 bp TCCCGCTGTAGTGCGAACTGCTTGAAGGACTTGACGATCAAGCCAGCATTGGAGAATGCTCTCAGCCGGTaGACTTGGCTTAACAGCACC +
Preference number: 4 (lower is better)
Translates to: SRCSANCLKDLTIKPALENALSR*TWLNST
Trigger: GGTGCTGTTAAGCCAAGTGCACCGGCTGAGAGCATT...CTCCAATGCTGGCTTGATCGTCAAGTCCTTCAAGCAGTTCGCACTACAGCGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR GCA 90 bp CGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCGTCAAACTCAGGTTCTaGAAAGATTTGTTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: RNLLLVGARIPKRSSGGAVKLRF*KDLLRL
Trigger: GAGCCTCAACAAATCTTTGCAGAACCTGAGTTTGAC...GGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp GCAAAGAGAGTGTACCTATTTATGCAGCGTACTTGGATGTTCACAGAAAAGACAGTGTCCAGGACGCGCTaGGGCCGGGCGTTCACGGTG +
Preference number: 4 (lower is better)
Translates to: AKRVYLFMQRTWMFTEKTVSRTR*GRAFTV
Trigger: CACCGTGAACGCCCGGCCGCAGCGCGTCCTGGACAC...TGTCTTTTCTGTGAACATCCAAGTACGCTGCATAAATAGGTACACTCTCTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS-3UTR GCA 90 bp AATAAAGTGAGGTGTTTCCCCTTTCAGCGTCTCAGAGAAACACAGAACAGGAGAAGCCAACGTTCACACTaGGGGGCCGCAGCAGCCGAC +
Preference number: 4 (lower is better)
Translates to: NKVRCFPFQRLRETQNRRSQRSH*GAAAAD
Trigger: GTCGGCTGCTGCGGCCCCGCAGTGTGAACGTTGGCT...TCTCCTGTTCTGTGTTTCTCTGAGACGCTGAAAGGGGAAACACCTCACTTTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp TTGTGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGCTAGGAAATGTCCCTaGTTGCGTGCACTGACTGTG +
Preference number: 4 (lower is better)
Translates to: LWLCSVCKTAHTRPAAPPARKCP*LRALTV
Trigger: CACAGTCAGTGCACGCAAGCAGGGACATTTCCTAGC...AGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TGCATGTACGTGGGCGGCAGACGCGGGCTGCTGACGGGAGTGCAGTTATACGACAAATCGAAAACCAAATaGATAAAGAGTGCGGAGACC +
Preference number: 4 (lower is better)
Translates to: CMYVGGRRGLLTGVQLYDKSKTK*IKSAET
Trigger: GGTCTCCGCACTCTTTATCCATTTGGTTTTCGATTT...GTCGTATAACTGCACTCCCGTCAGCAGCCCGCGTCTGCCGCCCACGTACATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CCA 90 bp AGGCAAAGAGAGTGTACCTATTTATGCAGCGTACTTGGATGTTCACAGAAAAGAGCACGCCCTTGTTGGTaGGGCTGGCGGGGGCCGACT +
Preference number: 4 (lower is better)
Translates to: RQRECTYLCSVLGCSQKRARPCW*GWRGPT
Trigger: AGTCGGCCCCCGCCAGCCCCACCAACAAGGGCGTGC...TCTTTTCTGTGAACATCCAAGTACGCTGCATAAATAGGTACACTCTCTTTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS-3UTR CCA 90 bp AGGCAAAGAGAGTGTACCTATTTATGCAGCGTACTTGGATGTTCACAGAAAAGATGGAGCTGCTGGTGCTaGACGCCGGAGGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: RQRECTYLCSVLGCSQKRWSCWC*TPEGSP
Trigger: GGGGCTCCCCTCCGGCGTCCAGCACCAGCAGCTCCA...TCTTTTCTGTGAACATCCAAGTACGCTGCATAAATAGGTACACTCTCTTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS-3UTR CCA 90 bp TTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGGGCGGCTTCTTCCTCTCTCTTaGTTTCCCGAATTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: LCSVCKTAHTRPAAPPGRLLPLS*FPEFPV
Trigger: CACTGGAAATTCGGGAAACCAAGAGAGAGGAAGAAG...CCGCCCAGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp CCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCAGTGTACCAGAATTGGTaGAATAAGAAACAAAAACGG +
Preference number: 4 (lower is better)
Translates to: PRRGDGIRAGTFFWWELAVYQNW*NKKQKR
Trigger: CCGTTTTTGTTTCTTATTTCACCAATTCTGGTACAC...TGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp GGTTCACATCACTCTGGGGAGGAGGGCGGGGATACTCACGCTGTCCACTGCGAGGTGTACCAGAATTGGTaGAATAAGAAACAAAAACGG +
Preference number: 4 (lower is better)
Translates to: GSHHSGEEGGDTHAVHCEVYQNW*NKKQKR
Trigger: CCGTTTTTGTTTCTTATTTCACCAATTCTGGTACAC...CTCGCAGTGGACAGCGTGAGTATCCCCGCCCTCCTCCCCAGAGTGATGTGAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR TCA 90 bp TTGTGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTTGTAGGCGATGCTGTTaGGTACTTTCATGGCCACGT +
Preference number: 4 (lower is better)
Translates to: LWLCSVCKTAHTRPAAPPCRRCC*VLSWPR
Trigger: ACGTGGCCATGAAAGTACTCAACAGCATCGCCTACA...AGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp TGTTGGTCACTCTCTGCTCTTAGCTTCACATTACCATTTCGTGTTTTGTCAAAGCTTCCCACGGCCAGGTaGGGCCAGTGCGGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: CWSLSALSFTLPFRVLSKLPTAR*GQCGWK
Trigger: CTTCCACCCGCACTGGCCTCACCTGGCCGTGGGAAG...CTTTGACAAAACACGAAATGGTAATGTGAAGCTAAGAGCAGAGAGTGACCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp TGGAGATCTCTGGGAGCCCTGCATTTAGCTTCACTTGTTAATGCTACACGGGGTGGCTGCGAGGGGAGCTaGCAAAAGCGTAAGAGACTT +
Preference number: 4 (lower is better)
Translates to: WRSLGALHLASLVNATRGGCEGS*QKRKRL
Trigger: AAGTCTCTTACGCTTTTGGCAGCTCCCCTCGCAGCC...ACCCCGTGTAGCATTAACAAGTGAAGCTAAATGCAGGGCTCCCAGAGATCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR GCA 90 bp CTTTTCTATCAAATCCAGTGTGACGCCAGGCACCAGACTGACACATTTCTGCATGCTACCTCCAGCTCCTaGTCCCGCTGTAGTGCGAAC +
Preference number: 4 (lower is better)
Translates to: LFYQIQCDARHQTDTFLHATSSS*SRCSAN
Trigger: GTTCGCACTACAGCGGGAGCAGGAGCTGGAGGTAGC...ATGCAGAAATGTGTCAGTCTGGTGCCTGGCGTCACACTGGATTTGATAGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR GCA 90 bp TTGTGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGTGATTTGGGTTGATTaGAGCTACCTCCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: LWLCSVCKTAHTRPAAPPVIWVD*SYLQLL
Trigger: CAGGAGCTGGAGGTAGCTGCAATCAACCCAAATCAC...AGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp ATTGTGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTCCTCTTCTATGAACTaGAGGGCCACGGTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: IVVVFCLQNCSYTPCGPSSSSMN*RATVQK
Trigger: TTTCTGCACCGTGGCCCTGCAGTTCATAGAAGAGGA...GGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp AAAGGCAAAGAGAGTGTACCTATTTATGCAGCGTACTTGGATGTTCACAGAAAACTGGCGGGGGCCGACTaGGTGAGGGAGGAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: KGKESVPIYAAYLDVHRKLAGAD*VREEVS
Trigger: GGACACCTCCTCCCTCACGCAGTCGGCCCCCGCCAG...TTTTCTGTGAACATCCAAGTACGCTGCATAAATAGGTACACTCTCTTTGCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS-3UTR GCA 90 bp TTGTGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTTTCTGTTTGCAAAACTaGTCATACACGCCCTGCGGC +
Preference number: 4 (lower is better)
Translates to: LWLCSVCKTAHTRPAAPPFCLQN*SYTPCG
Trigger: GCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAA...AGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAAAATCGAAAACCAAATaGATAAAGAGTGCGGAGACC +
Preference number: 4 (lower is better)
Translates to: FSAQTWGWDSCRNLLLVGKSKTK*IKSAET
Trigger: GGTCTCCGCACTCTTTATCCATTTGGTTTTCGATTT...TCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp CGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCTCTGAGCTAAGGATTTaGAGCCTTCAATTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: RNLLLVGARIPKRSSGGASELRI*SLQFSH
Trigger: GTGAGAAAATTGAAGGCTCCAAATCCTTAGCTCAGA...GGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp ATCAAATCCAGTGTGACGCCAGGCACCAGACTGACACATTTCTGCATGCAAAACATGGTGAGCCACACCTaGAATGCGGTCAGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: IKSSVTPGTRLTHFCMQNMVSHT*NAVSCS
Trigger: CGAGCAGCTGACCGCATTCCAGGTGTGGCTCACCAT...GTTTTGCATGCAGAAATGTGTCAGTCTGGTGCCTGGCGTCACACTGGATTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CCA 90 bp AGAGTGTACCTATTTATGCAGCGTACTTGGATGTTCACAGAAAAGACAACACATTGTGCACGCCCTTGTTaGTGGGGCTGGCGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: RVYLFMQRTWMFTEKTTHCARPC*WGWRGP
Trigger: CGGCCCCCGCCAGCCCCACCAACAAGGGCGTGCACA...ATGTGTTGTCTTTTCTGTGAACATCCAAGTACGCTGCATAAATAGGTACACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS-3UTR CCA 90 bp TTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAAACAGAAACGCGTGTTaGGTAAGAATTGAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: FSAQTWGWDSCRNLLLVGNRNAC*VRIELK
Trigger: CTTCAACTCAATTCTTACCCAACACGCGTTTCTGTT...TCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp GAGAGTGTACCTATTTATGCAGCGTACTTGGATGTTCACAGAAAAGACAACACACCCAGGACGGCAGGGTaGGTCCTGCCCCATCCCATG +
Preference number: 4 (lower is better)
Translates to: ESVPIYAAYLDVHRKDNTPRTAG*VLPHPM
Trigger: CATGGGATGGGGCAGGACCCACCCTGCCGTCCTGGG...TGTGTTGTCTTTTCTGTGAACATCCAAGTACGCTGCATAAATAGGTACACTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS-3UTR TCA 90 bp AATAAAGTGAGGTGTTTCCCCTTTCAGCGTCTCAGAGAAACACAGAACAGGAGAGGTCACGCCGCTATCTaGCACGCTTCTCCACCGAGT +
Preference number: 4 (lower is better)
Translates to: NKVRCFPFQRLRETQNRRGHAAI*HASPPS
Trigger: ACTCGGTGGAGAAGCGTGTCAGATAGCGGCGTGACC...TCTCCTGTTCTGTGTTTCTCTGAGACGCTGAAAGGGGAAACACCTCACTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CCACGTCTGCAGGTCATATATGGACAGAGGGATGTACTGCGTGTAGTTCTTGTTGGGTCATGGGAGCTTTaGCCTCTGGTTTGGAGCTAC +
Preference number: 4 (lower is better)
Translates to: PRLQVIYGQRDVLRVVLVGSWEL*PLVWSY
Trigger: GTAGCTCCAAACCAGAGGGCAAAGCTCCCATGACCC...AACAAGAACTACACGCAGTACATCCCTCTGTCCATATATGACCTGCAGACGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR GCA 90 bp CTACTGGTTTCTAAAAGGTTAGAAACTCTCTTGCAAAGTGCTACCCTCCCGAGTACTCGTCTGAGCTGCTaGAACCAGAGCCACGACCGG +
Preference number: 4 (lower is better)
Translates to: LLVSKRLETLLQSATLPSTRLSC*NQSHDR
Trigger: CCGGTCGTGGCTCTGGTTGCAGCAGCTCAGACGAGT...ACTCGGGAGGGTAGCACTTTGCAAGAGAGTTTCTAACCTTTTAGAAACCAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR GCA 90 bp TTCTCACTACTGGTTTCTAAAAGGTTAGAAACTCTCTTGCAAAGTGCTACCCTCAGCCACTCTCAGCCCTaGGGGTCCCGCACTCGTCTG +
Preference number: 4 (lower is better)
Translates to: FSLLVSKRLETLLQSATLSHSQP*GSRTRL
Trigger: CAGACGAGTGCGGGACCCGCAGGGCTGAGAGTGGCT...GAGGGTAGCACTTTGCAAGAGAGTTTCTAACCTTTTAGAAACCAGTAGTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR GCA 90 bp TCTCTGGGAGCCCTGCATTTAGCTTCACTTGTTAATGCTACACGGGGTCCCCAACTGCCCATCCACGTCTaGAGGTCATATATGGACAGA +
Preference number: 4 (lower is better)
Translates to: SLGALHLASLVNATRGPQLPIHV*RSYMDR
Trigger: TCTGTCCATATATGACCTGCAGACGTGGATGGGCAG...TTGGGGACCCCGTGTAGCATTAACAAGTGAAGCTAAATGCAGGGCTCCCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR GCA 90 bp CTACTGGTTTCTAAAAGGTTAGAAACTCTCTTGCAAAGTGCTACCCTCCCGAGTGCTACCTCCAGCTCCTaGTCCCGCTGTAGTGCGAAC +
Preference number: 4 (lower is better)
Translates to: LLVSKRLETLLQSATLPSATSSS*SRCSAN
Trigger: GTTCGCACTACAGCGGGAGCAGGAGCTGGAGGTAGC...ACTCGGGAGGGTAGCACTTTGCAAGAGAGTTTCTAACCTTTTAGAAACCAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR GCA 90 bp CCACGTCTGCAGGTCATATATGGACAGAGGGATGTACTGCGTGTAGTTCTTGTTTGGCTTAACAGCACCTaGAGGACGATGGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: PRLQVIYGQRDVLRVVLVWLNST*RTMGSC
Trigger: ACAGCTGCCCATCGTCCTGCAGGTGCTGTTAAGCCA...AACAAGAACTACACGCAGTACATCCCTCTGTCCATATATGACCTGCAGACGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR GCA 90 bp GAGAGTGTACCTATTTATGCAGCGTACTTGGATGTTCACAGAAAAGACAACACACCCGCCTGGTGGATGTaGACGCCCTTGTTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: ESVPIYAAYLDVHRKDNTPAWWM*TPLLVG
Trigger: CCCCACCAACAAGGGCGTGCACATCCACCAGGCGGG...TGTGTTGTCTTTTCTGTGAACATCCAAGTACGCTGCATAAATAGGTACACTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS-3UTR GCA 90 bp AATAAAGTGAGGTGTTTCCCCTTTCAGCGTCTCAGAGAAACACAGAACAGGAGAGGCCGTGGTGCCATCTaGACATGCGTGTGCTACACC +
Preference number: 4 (lower is better)
Translates to: NKVRCFPFQRLRETQNRRGRGAI*TCVCYT
Trigger: GGTGTAGCACACGCATGTGCAGATGGCACCACGGCC...TCTCCTGTTCTGTGTTTCTCTGAGACGCTGAAAGGGGAAACACCTCACTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp GCAAAGAGAGTGTACCTATTTATGCAGCGTACTTGGATGTTCACAGAAAAGACAGCTCTGCAGTGCAGCTaGCCCCAAGCGGACGCAGAG +
Preference number: 4 (lower is better)
Translates to: AKRVYLFMQRTWMFTEKTALQCS*PQADAE
Trigger: CTCTGCGTCCGCTTGGGGGCAGCTGCACTGCAGAGC...TGTCTTTTCTGTGAACATCCAAGTACGCTGCATAAATAGGTACACTCTCTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS-3UTR CCA 90 bp TCTCTGGGAGCCCTGCATTTAGCTTCACTTGTTAATGCTACACGGGGTCCCCAAACAATGTGGGCTTATTaGGTCATGGGAGCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: SLGALHLASLVNATRGPQTMWAY*VMGALP
Trigger: GGGCAAAGCTCCCATGACCCAATAAGCCCACATTGT...TTGGGGACCCCGTGTAGCATTAACAAGTGAAGCTAAATGCAGGGCTCCCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CCA 90 bp ATTGTGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCAGGAAAGGGACAATGTaGGCTTATTGGGTCATGGGA +
Preference number: 4 (lower is better)
Translates to: IVVVFCLQNCSYTPCGPSRKGTM*AYWVMG
Trigger: TCCCATGACCCAATAAGCCCACATTGTCCCTTTCCT...GGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR CCA 90 bp CTCAAAACAAACAGAAACGCGTGTTGGGTAAGAATTGAGTTGAAGGACTGGATGGGGTGGGGGAGTCCTTaGCAGCAAGCGCTCGAGAAC +
Preference number: 4 (lower is better)
Translates to: LKTNRNACWVRIELKDWMGWGSP*QQALEN
Trigger: GTTCTCGAGCGCTTGCTGCCAAGGACTCCCCCACCC...CATCCAGTCCTTCAACTCAATTCTTACCCAACACGCGTTTCTGTTTGTTTTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TCCAGACACGACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTGCCGTTCTGAGCTAAGGATTTaGAGCCTTCAATTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: SRHDSEDRQKRVAGPSCRSELRI*SLQFSH
Trigger: GTGAGAAAATTGAAGGCTCCAAATCCTTAGCTCAGA...ACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTCGTGTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp AATAAAGTGAGGTGTTTCCCCTTTCAGCGTCTCAGAGAAACACAGAACAGGAGAGATGCTGGTGCTCAGTaGGAAGCCACCGTCAACCCG +
Preference number: 4 (lower is better)
Translates to: NKVRCFPFQRLRETQNRRDAGAQ*EATVNP
Trigger: CGGGTTGACGGTGGCTTCCCACTGAGCACCAGCATC...TCTCCTGTTCTGTGTTTCTCTGAGACGCTGAAAGGGGAAACACCTCACTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp GGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAACTTCTTCCTCTCTCTTaGTTTCCCGAATTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: GDGIRAGTFFWWELAFQKLLPLS*FPEFPV
Trigger: CACTGGAAATTCGGGAAACCAAGAGAGAGGAAGAAG...TTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TGTTGGTCACTCTCTGCTCTTAGCTTCACATTACCATTTCGTGTTTTGTCAAAGCAGCTCTCACTCCCGTaGTCGTGGGCCTCTCACCGC +
Preference number: 4 (lower is better)
Translates to: CWSLSALSFTLPFRVLSKQLSLP*SWASHR
Trigger: GCGGTGAGAGGCCCACGACCACGGGAGTGAGAGCTG...CTTTGACAAAACACGAAATGGTAATGTGAAGCTAAGAGCAGAGAGTGACCAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TTGTGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGGAACCTTCTTCTGGTaGGAGCTCGCATTCCAAAAA +
Preference number: 4 (lower is better)
Translates to: LWLCSVCKTAHTRPAAPPGTFFW*ELAFQK
Trigger: TTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCC...AGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp TGGAGATCTCTGGGAGCCCTGCATTTAGCTTCACTTGTTAATGCTACACGGGGTTTCATCCTCCAGCTCTaGGCTAAGGATTTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: WRSLGALHLASLVNATRGFILQL*AKDLEP
Trigger: AGGCTCCAAATCCTTAGCTCAGAGCTGGAGGATGAA...ACCCCGTGTAGCATTAACAAGTGAAGCTAAATGCAGGGCTCCCAGAGATCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR TCA 90 bp TGGAGATCTCTGGGAGCCCTGCATTTAGCTTCACTTGTTAATGCTACACGGGGTACGTGCAGAGCTTCTTaGCTTCATCCACAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: WRSLGALHLASLVNATRGTCRAS*LHPQLG
Trigger: ACCCAACTGTGGATGAAGTCAAGAAGCTCTGCACGT...ACCCCGTGTAGCATTAACAAGTGAAGCTAAATGCAGGGCTCCCAGAGATCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR TCA 90 bp TGTTGGTCACTCTCTGCTCTTAGCTTCACATTACCATTTCGTGTTTTGTCAAAGCGAGGCCAGCCACGATaGGTGAGCGGTGGGAATCAC +
Preference number: 4 (lower is better)
Translates to: CWSLSALSFTLPFRVLSKRGQPR*VSGGNH
Trigger: GTGATTCCCACCGCTCACTCATCGTGGCTGGCCTCG...CTTTGACAAAACACGAAATGGTAATGTGAAGCTAAGAGCAGAGAGTGACCAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp TGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGCCGGTTAACGTCGTaGTTGAATTTTCACATCAGA +
Preference number: 4 (lower is better)
Translates to: WGWDSCRNLLLVGARIPKSRLTS*LNFHIR
Trigger: TCTGATGTGAAAATTCAATCACGACGTTAACCGGCT...TTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp AAAGGCAAAGAGAGTGTACCTATTTATGCAGCGTACTTGGATGTTCACAGAAAAAGAGGGGTGCACGAGTaGGGACCAGCACCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: KGKESVPIYAAYLDVHRKRGVHE*GPAPGS
Trigger: AGACCCGGGTGCTGGTCCTCACTCGTGCACCCCTCT...TTTTCTGTGAACATCCAAGTACGCTGCATAAATAGGTACACTCTCTTTGCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS-3UTR GCA 90 bp AGATCTCTGGGAGCCCTGCATTTAGCTTCACTTGTTAATGCTACACGGGGTCCCCAAATGGATAAAGAGTaGGGAGACCCTTACTCAGGC +
Preference number: 4 (lower is better)
Translates to: RSLGALHLASLVNATRGPQMDKE*GDPYSG
Trigger: GCCTGAGTAAGGGTCTCCGCACTCTTTATCCATTTG...GGGACCCCGTGTAGCATTAACAAGTGAAGCTAAATGCAGGGCTCCCAGAGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR GCA 90 bp GTTTCTAAAAGGTTAGAAACTCTCTTGCAAAGTGCTACCCTCCCGAGTTGCAGACCAGCATTCCAAGCGTaGACAGGGCGTGGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: VSKRLETLLQSATLPSCRPAFQA*TGRGLH
Trigger: GTGAAGACCACGCCCTGTGCACGCTTGGAATGCTGG...TCTGCAACTCGGGAGGGTAGCACTTTGCAAGAGAGTTTCTAACCTTTTAGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR GCA 90 bp ATTGTGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGCCAGTTCTCGTACTaGTTCTGTAAATTTGCACCG +
Preference number: 4 (lower is better)
Translates to: IVVVFCLQNCSYTPCGPSCQFSY*FCKFAP
Trigger: CGGTGCAAATTTACAGAAGCAGTACGAGAACTGGCA...GGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CTCAAAACAAACAGAAACGCGTGTTGGGTAAGAATTGAGTTGAAGGACTGGATGGTTGGGTCAAGGCTCTaGTTGTACCGGGCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: LKTNRNACWVRIELKDWMVGSRL*LYRALG
Trigger: GCCAAGGGCCCGGTACAAGCAGAGCCTTGACCCAAC...CATCCAGTCCTTCAACTCAATTCTTACCCAACACGCGTTTCTGTTTGTTTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CTCAAAACAAACAGAAACGCGTGTTGGGTAAGAATTGAGTTGAAGGACTGGATGTCCGGGACCCGGCAGTaGCTCTTGCCTGTATGTGAG +
Preference number: 4 (lower is better)
Translates to: LKTNRNACWVRIELKDWMSGTRQ*LLPVCE
Trigger: CTCACATACAGGCAAGAGGCACTGCCGGGTCCCGGA...CATCCAGTCCTTCAACTCAATTCTTACCCAACACGCGTTTCTGTTTGTTTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp AGAGTGTACCTATTTATGCAGCGTACTTGGATGTTCACAGAAAAGACAACACATCCGGGCTCCCGTACCTaGTCTGGGCCCTTGTCGAAC +
Preference number: 4 (lower is better)
Translates to: RVYLFMQRTWMFTEKTTHPGSRT*SGPLSN
Trigger: GTTCGACAAGGGCCCAGAGCAGGTACGGGAGCCCGG...ATGTGTTGTCTTTTCTGTGAACATCCAAGTACGCTGCATAAATAGGTACACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS-3UTR CCA 90 bp AGAGCGATCTTGCATGTGCTTCATAAATTCAAGTCAGCAAGTTATTTTCTCACTCAGGCAGGCCGCTCTTaGTGCCGGTTCGCCCACTGG +
Preference number: 4 (lower is better)
Translates to: RAILHVLHKFKSASYFLTQAGRS*CRFAHW
Trigger: CCAGTGGGCGAACCGGCACCAAGAGCGGCCTGCCTG...AGTGAGAAAATAACTTGCTGACTTGAATTTATGAAGCACATGCAAGATCGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CCA 90 bp ATCAAATCCAGTGTGACGCCAGGCACCAGACTGACACATTTCTGCATGCAAAACTCGCAGGCTGCCAGCTaGATGCAGTTTTTCATCGAC +
Preference number: 4 (lower is better)
Translates to: IKSSVTPGTRLTHFCMQNSQAAS*MQFFID
Trigger: GTCGATGAAAAACTGCATCCAGCTGGCAGCCTGCGA...GTTTTGCATGCAGAAATGTGTCAGTCTGGTGCCTGGCGTCACACTGGATTTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CCA 90 bp TTCTCCAGAGCGATCTTGCATGTGCTTCATAAATTCAAGTCAGCAAGTTATTTTTGGCGTGCATGTACGTaGGCGGCAGACGCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: FSRAILHVLHKFKSASYFWRACT*AADAGC
Trigger: GCAGCCCGCGTCTGCCGCCCACGTACATGCACGCCA...AAAATAACTTGCTGACTTGAATTTATGAAGCACATGCAAGATCGCTCTGGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CCA 90 bp AATAAAGTGAGGTGTTTCCCCTTTCAGCGTCTCAGAGAAACACAGAACAGGAGAGATGAAAACGAGAAGTaGCCGCAGCTCTCGGGCCGA +
Preference number: 4 (lower is better)
Translates to: NKVRCFPFQRLRETQNRRDENEK*PQLSGR
Trigger: TCGGCCCGAGAGCTGCGGCCACTTCTCGTTTTCATC...TCTCCTGTTCTGTGTTTCTCTGAGACGCTGAAAGGGGAAACACCTCACTTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp CTCAAAACAAACAGAAACGCGTGTTGGGTAAGAATTGAGTTGAAGGACTGGATGTGGCACCATCGTCTGTaGCCGTCAGCAGAAGCGAGC +
Preference number: 4 (lower is better)
Translates to: LKTNRNACWVRIELKDWMWHHRL*PSAEAS
Trigger: GCTCGCTTCTGCTGACGGCCACAGACGATGGTGCCA...CATCCAGTCCTTCAACTCAATTCTTACCCAACACGCGTTTCTGTTTGTTTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TGTTGGTCACTCTCTGCTCTTAGCTTCACATTACCATTTCGTGTTTTGTCAAAGTTCTCGGCCCAGACGTaGGGATGGGATTCGTGCCGG +
Preference number: 4 (lower is better)
Translates to: CWSLSALSFTLPFRVLSKFSAQT*GWDSCR
Trigger: CCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAA...CTTTGACAAAACACGAAATGGTAATGTGAAGCTAAGAGCAGAGAGTGACCAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
3UTR CAA 72 bp AAAACAAACAGAAACGCGTGTTGGGTAAGAATTGAGTaGAAGGACTGGATGGGAAGCTGCGTGTGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: KTNRNACWVRIE*KDWMGSCVCGW
Trigger: CCACCCGCACACGCAGCTTCCCATCCAGTCCTTCAACTCAATTCTTACCCAACACGCGTTTCTGTTTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp TGTTGGTCACTCTCTGCTCTTAGCTTCACATTACCATTTCGTGTTTTGTCAAAGAGCCCTCCCCTTCCCTaGCATTCCAGACACGACAGC +
Preference number: 4 (lower is better)
Translates to: CWSLSALSFTLPFRVLSKSPPLP*HSRHDS
Trigger: GCTGTCGTGTCTGGAATGTCAGGGAAGGGGAGGGCT...CTTTGACAAAACACGAAATGGTAATGTGAAGCTAAGAGCAGAGAGTGACCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp ATTGTGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCAGCCGGTTAACGTCGTaGTTGAATTTTCACATCAGA +
Preference number: 4 (lower is better)
Translates to: IVVVFCLQNCSYTPCGPSSRLTS*LNFHIR
Trigger: TCTGATGTGAAAATTCAATCACGACGTTAACCGGCT...GGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp GTTTCTAAAAGGTTAGAAACTCTCTTGCAAAGTGCTACCCTCCCGAGTTGCAGAGGGTCATGGGAGCTTTaGCCTCTGGTTTGGAGCTAC +
Preference number: 4 (lower is better)
Translates to: VSKRLETLLQSATLPSCRGSWEL*PLVWSY
Trigger: GTAGCTCCAAACCAGAGGGCAAAGCTCCCATGACCC...TCTGCAACTCGGGAGGGTAGCACTTTGCAAGAGAGTTTCTAACCTTTTAGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR GCA 90 bp TTCTCACTACTGGTTTCTAAAAGGTTAGAAACTCTCTTGCAAAGTGCTACCCTCCCCGAGGCTCTCTCCTaGCTGAGAACGAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: FSLLVSKRLETLLQSATLPEALS*LRTSPE
Trigger: CTCAGGACTCGTTCTCAGGCAGGAGAGAGCCTCGGG...GAGGGTAGCACTTTGCAAGAGAGTTTCTAACCTTTTAGAAACCAGTAGTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR GCA 90 bp CTCAAAACAAACAGAAACGCGTGTTGGGTAAGAATTGAGTTGAAGGACTGGATGCCAGCATTCCAAGCGTaGACAGGGCGTGGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: LKTNRNACWVRIELKDWMPAFQA*TGRGLH
Trigger: GTGAAGACCACGCCCTGTGCACGCTTGGAATGCTGG...CATCCAGTCCTTCAACTCAATTCTTACCCAACACGCGTTTCTGTTTGTTTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CTCAAAACAAACAGAAACGCGTGTTGGGTAAGAATTGAGTTGAAGGACTGGATGTACCGGGCCCTTGGCTaGCAGTTCTCGTACTGCTTC +
Preference number: 4 (lower is better)
Translates to: LKTNRNACWVRIELKDWMYRALG*QFSYCF
Trigger: GAAGCAGTACGAGAACTGGCAGCCAAGGGCCCGGTA...CATCCAGTCCTTCAACTCAATTCTTACCCAACACGCGTTTCTGTTTGTTTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp CCACGTCTGCAGGTCATATATGGACAGAGGGATGTACTGCGTGTAGTTCTTGTTCTGCCCATCCACGTCTaGAGGTCATATATGGACAGA +
Preference number: 4 (lower is better)
Translates to: PRLQVIYGQRDVLRVVLVLPIHV*RSYMDR
Trigger: TCTGTCCATATATGACCTGCAGACGTGGATGGGCAG...AACAAGAACTACACGCAGTACATCCCTCTGTCCATATATGACCTGCAGACGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR GCA 90 bp AGGCAAAGAGAGTGTACCTATTTATGCAGCGTACTTGGATGTTCACAGAAAAGATCTCGGCTGACCGGCTaGTTGGCCACATCGTTGGTC +
Preference number: 4 (lower is better)
Translates to: RQRECTYLCSVLGCSQKRSRLTG*LATSLV
Trigger: GACCAACGATGTGGCCAAGCAGCCGGTCAGCCGAGA...TCTTTTCTGTGAACATCCAAGTACGCTGCATAAATAGGTACACTCTCTTTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS-3UTR GCA 90 bp CTCAAAACAAACAGAAACGCGTGTTGGGTAAGAATTGAGTTGAAGGACTGGATGCCCGGCAGTGCCTCTTaGCTGTATGTGAGGAACGTG +
Preference number: 4 (lower is better)
Translates to: LKTNRNACWVRIELKDWMPGSAS*LYVRNV
Trigger: CACGTTCCTCACATACAGGCAAGAGGCACTGCCGGG...CATCCAGTCCTTCAACTCAATTCTTACCCAACACGCGTTTCTGTTTGTTTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp AGAGTGTACCTATTTATGCAGCGTACTTGGATGTTCACAGAAAAGACAACACATACCAGCACCCGGGTCTaGAAAGGCAGAGAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: RVYLFMQRTWMFTEKTTHTSTRV*KGREWP
Trigger: GGGCCACTCTCTGCCTTTGCAGACCCGGGTGCTGGT...ATGTGTTGTCTTTTCTGTGAACATCCAAGTACGCTGCATAAATAGGTACACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS-3UTR CCA 90 bp TGGAGATCTCTGGGAGCCCTGCATTTAGCTTCACTTGTTAATGCTACACGGGGTAGGAAAGGGACAATGTaGGCTTATTGGGTCATGGGA +
Preference number: 4 (lower is better)
Translates to: WRSLGALHLASLVNATRGRKGTM*AYWVMG
Trigger: TCCCATGACCCAATAAGCCCACATTGTCCCTTTCCT...ACCCCGTGTAGCATTAACAAGTGAAGCTAAATGCAGGGCTCCCAGAGATCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CCA 90 bp AATAAAGTGAGGTGTTTCCCCTTTCAGCGTCTCAGAGAAACACAGAACAGGAGACAGGTCGTGCTCTTCTaGGATCTTCATGACGGGCTG +
Preference number: 4 (lower is better)
Translates to: NKVRCFPFQRLRETQNRRQVVLF*DLHDGL
Trigger: CAGCCCGTCATGAAGATCCCAGAAGAGCACGACCTG...TCTCCTGTTCTGTGTTTCTCTGAGACGCTGAAAGGGGAAACACCTCACTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TGTTGGTCACTCTCTGCTCTTAGCTTCACATTACCATTTCGTGTTTTGTCAAAGTGGCACCATCGTCTGTaGCCGTCAGCAGAAGCGAGC +
Preference number: 4 (lower is better)
Translates to: CWSLSALSFTLPFRVLSKWHHRL*PSAEAS
Trigger: GCTCGCTTCTGCTGACGGCCACAGACGATGGTGCCA...CTTTGACAAAACACGAAATGGTAATGTGAAGCTAAGAGCAGAGAGTGACCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TGTTGGTCACTCTCTGCTCTTAGCTTCACATTACCATTTCGTGTTTTGTCAAAGCTCACACTCACGATGTaGCCGTCGGGACGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: CWSLSALSFTLPFRVLSKLTLTM*PSGRFC
Trigger: GCAGAAGCGTCCCGACGGCCACATCGTGAGTGTGAG...CTTTGACAAAACACGAAATGGTAATGTGAAGCTAAGAGCAGAGAGTGACCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp TGTTGGTCACTCTCTGCTCTTAGCTTCACATTACCATTTCGTGTTTTGTCAAAGGGGAAAGGAGCCCCGTaGATTAAGGCAGGGGCTACC +
Preference number: 4 (lower is better)
Translates to: CWSLSALSFTLPFRVLSKGKGAP*IKAGAT
Trigger: GGTAGCCCCTGCCTTAATCCACGGGGCTCCTTTCCC...CTTTGACAAAACACGAAATGGTAATGTGAAGCTAAGAGCAGAGAGTGACCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp CTCAAAACAAACAGAAACGCGTGTTGGGTAAGAATTGAGTTGAAGGACTGGATGGCTTCTGGAAGATTCTaGTGTTGCCGCCTGGCACGC +
Preference number: 4 (lower is better)
Translates to: LKTNRNACWVRIELKDWMASGRF*CCRLAR
Trigger: GCGTGCCAGGCGGCAACACCAGAATCTTCCAGAAGC...CATCCAGTCCTTCAACTCAATTCTTACCCAACACGCGTTTCTGTTTGTTTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp CTTTTCTATCAAATCCAGTGTGACGCCAGGCACCAGACTGACACATTTCTGCATTTCATCCTCCAGCTCTaGGCTAAGGATTTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: LFYQIQCDARHQTDTFLHFILQL*AKDLEP
Trigger: AGGCTCCAAATCCTTAGCTCAGAGCTGGAGGATGAA...ATGCAGAAATGTGTCAGTCTGGTGCCTGGCGTCACACTGGATTTGATAGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR TCA 90 bp AAAGGCAAAGAGAGTGTACCTATTTATGCAGCGTACTTGGATGTTCACAGAAAAAAGGCAAGTCTCGGCTaGCCGGCTGCTTGGCCACAT +
Preference number: 4 (lower is better)
Translates to: KGKESVPIYAAYLDVHRKKASLG*PAAWPH
Trigger: ATGTGGCCAAGCAGCCGGTCAGCCGAGACTTGCCTT...TTTTCTGTGAACATCCAAGTACGCTGCATAAATAGGTACACTCTCTTTGCCTTT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS-3UTR TCA 90 bp AGAGTGTACCTATTTATGCAGCGTACTTGGATGTTCACAGAAAAGACAACACATTGCCCCATCCCATGGTaGTGTGAGCAGCCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: RVYLFMQRTWMFTEKTTHCPIPW*CEQPEA
Trigger: AGCCTCAGGCTGCTCACATCACCATGGGATGGGGCA...ATGTGTTGTCTTTTCTGTGAACATCCAAGTACGCTGCATAAATAGGTACACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS-3UTR TCA 90 bp CAAAGAGAGTGTACCTATTTATGCAGCGTACTTGGATGTTCACAGAAAAGACAAAGCTGCCCAGAATGGTaGAACCAGAACCAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: QRECTYLCSVLGCSQKRQSCPEW*NQNQGR
Trigger: CCGCCCCTGGTTCTGGTTTCACCATTCTGGGCAGCT...TTGTCTTTTCTGTGAACATCCAAGTACGCTGCATAAATAGGTACACTCTCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS-3UTR GCA 90 bp TGTTGGTCACTCTCTGCTCTTAGCTTCACATTACCATTTCGTGTTTTGTCAAAGCCAGCATTCCAAGCGTaGACAGGGCGTGGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: CWSLSALSFTLPFRVLSKPAFQA*TGRGLH
Trigger: GTGAAGACCACGCCCTGTGCACGCTTGGAATGCTGG...CTTTGACAAAACACGAAATGGTAATGTGAAGCTAAGAGCAGAGAGTGACCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp TGGAGATCTCTGGGAGCCCTGCATTTAGCTTCACTTGTTAATGCTACACGGGGTTGCCAGTTCTCGTACTaGTTCTGTAAATTTGCACCG +
Preference number: 4 (lower is better)
Translates to: WRSLGALHLASLVNATRGCQFSY*FCKFAP
Trigger: CGGTGCAAATTTACAGAAGCAGTACGAGAACTGGCA...ACCCCGTGTAGCATTAACAAGTGAAGCTAAATGCAGGGCTCCCAGAGATCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR GCA 90 bp CTCAAAACAAACAGAAACGCGTGTTGGGTAAGAATTGAGTTGAAGGACTGGATGCCCGTAGGGATGTCCTaGACCTTCATCTCACGGTCT +
Preference number: 4 (lower is better)
Translates to: LKTNRNACWVRIELKDWMPVGMS*TFISRS
Trigger: AGACCGTGAGATGAAGGTGCAGGACATCCCTACGGG...CATCCAGTCCTTCAACTCAATTCTTACCCAACACGCGTTTCTGTTTGTTTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp AATAAAGTGAGGTGTTTCCCCTTTCAGCGTCTCAGAGAAACACAGAACAGGAGAGCTAGGAAATGTCCCTaGTTGCGTGCACTGACTGTG +
Preference number: 4 (lower is better)
Translates to: NKVRCFPFQRLRETQNRRARKCP*LRALTV
Trigger: CACAGTCAGTGCACGCAAGCAGGGACATTTCCTAGC...TCTCCTGTTCTGTGTTTCTCTGAGACGCTGAAAGGGGAAACACCTCACTTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR GCA 90 bp TTCTCCAGAGCGATCTTGCATGTGCTTCATAAATTCAAGTCAGCAAGTTATTTTTCCATGACATCACAGTaGCACGGAGGGCGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: FSRAILHVLHKFKSASYFSMTSQ*HGGRGS
Trigger: GCTCCCCCGCCCTCCGTGGCACTGTGATGTCATGGA...AAAATAACTTGCTGACTTGAATTTATGAAGCACATGCAAGATCGCTCTGGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR GCA 90 bp GAAACTCTCTTGCAAAGTGCTACCCTCCCGAGTTGCAGAGCTGTGAGGCTTCAGTCTCCAGAGCGATCTTaGATGTGCTTCATAAATTCA +
Preference number: 4 (lower is better)
Translates to: ETLLQSATLPSCRAVRLQSPERS*MCFINS
Trigger: TGAATTTATGAAGCACATGCAAGATCGCTCTGGAGA...CTGAAGCCTCACAGCTCTGCAACTCGGGAGGGTAGCACTTTGCAAGAGAGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CCA 90 bp TTCTCCAGAGCGATCTTGCATGTGCTTCATAAATTCAAGTCAGCAAGTTATTTTGGGGCCGCTAGGAAATaGGGCAGCCCAAGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: FSRAILHVLHKFKSASYFGAARK*GSPRSS
Trigger: GGAGCTTCTTGGGCTGCCCCATTTCCTAGCGGCCCC...AAAATAACTTGCTGACTTGAATTTATGAAGCACATGCAAGATCGCTCTGGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CCA 90 bp TTCTCACTACTGGTTTCTAAAAGGTTAGAAACTCTCTTGCAAAGTGCTACCCTCCTTGTACCGGGCCCTTaGCTGCCAGTTCTCGTACTG +
Preference number: 4 (lower is better)
Translates to: FSLLVSKRLETLLQSATLLVPGP*LPVLVL
Trigger: CAGTACGAGAACTGGCAGCCAAGGGCCCGGTACAAG...GAGGGTAGCACTTTGCAAGAGAGTTTCTAACCTTTTAGAAACCAGTAGTGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CCA 90 bp CAGGTCATATATGGACAGAGGGATGTACTGCGTGTAGTTCTTGTTGAAGACCCACGATCAAGCCAGCATTaGAGCAGTCGTAGACGAAGA +
Preference number: 4 (lower is better)
Translates to: QVIYGQRDVLRVVLVEDPRSSQH*SSRRRR
Trigger: TCTTCGTCTACGACTGCTCCAATGCTGGCTTGATCG...TGGGTCTTCAACAAGAACTACACGCAGTACATCCCTCTGTCCATATATGACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CCA 90 bp GTTTCTAAAAGGTTAGAAACTCTCTTGCAAAGTGCTACCCTCCCGAGTTGCAGATGTCTGAAGAGCTTTTaGAAGAGATCCCGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: VSKRLETLLQSATLPSCRCLKSF*KRSRGS
Trigger: GCTCCCCCGGGATCTCTTCCAAAAGCTCTTCAGACA...TCTGCAACTCGGGAGGGTAGCACTTTGCAAGAGAGTTTCTAACCTTTTAGAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CCA 90 bp AATAAAGTGAGGTGTTTCCCCTTTCAGCGTCTCAGAGAAACACAGAACAGGAGATCCCTCTGTGGTTGCTaGAGAAGGCAAGGCGTAGTT +
Preference number: 4 (lower is better)
Translates to: NKVRCFPFQRLRETQNRRSLCGC*RRQGVV
Trigger: AACTACGCCTTGCCTTCTCCAGCAACCACAGAGGGA...TCTCCTGTTCTGTGTTTCTCTGAGACGCTGAAAGGGGAAACACCTCACTTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp AGAGTGTACCTATTTATGCAGCGTACTTGGATGTTCACAGAAAAGACAACACATCATCGTTGGTCAGGCTaGAGCTGCTGGTGCTGGACG +
Preference number: 4 (lower is better)
Translates to: RVYLFMQRTWMFTEKTTHHRWSG*SCWCWT
Trigger: CGTCCAGCACCAGCAGCTCCAGCCTGACCAACGATG...ATGTGTTGTCTTTTCTGTGAACATCCAAGTACGCTGCATAAATAGGTACACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS-3UTR CCA 90 bp AAGAGAGTGTACCTATTTATGCAGCGTACTTGGATGTTCACAGAAAAGACAACAGCTTGGCCACATCGTTaGTCAGGCTGGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: KRVYLFMQRTWMFTEKTTAWPHR*SGWSCW
Trigger: CCAGCAGCTCCAGCCTGACCAACGATGTGGCCAAGC...TGTTGTCTTTTCTGTGAACATCCAAGTACGCTGCATAAATAGGTACACTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS-3UTR TCA 90 bp AGAGCGATCTTGCATGTGCTTCATAAATTCAAGTCAGCAAGTTATTTTCTCACTAAGGCTTCTGCCCTCTaGAGGAGACCCCCACTCCTC +
Preference number: 4 (lower is better)
Translates to: RAILHVLHKFKSASYFLTKASAL*RRPPLL
Trigger: GAGGAGTGGGGGTCTCCTTCAGAGGGCAGAAGCCTT...AGTGAGAAAATAACTTGCTGACTTGAATTTATGAAGCACATGCAAGATCGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR GCA 90 bp AAAGGCAAAGAGAGTGTACCTATTTATGCAGCGTACTTGGATGTTCACAGAAAAACAAATGCTCTGCAGTaGAGCTGCCCCCAAGCGGAC +
Preference number: 4 (lower is better)
Translates to: KGKESVPIYAAYLDVHRKTNALQ*SCPQAD
Trigger: GTCCGCTTGGGGGCAGCTGCACTGCAGAGCATTTGT...TTTTCTGTGAACATCCAAGTACGCTGCATAAATAGGTACACTCTCTTTGCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS-3UTR CCA 90 bp TTCTCCAGAGCGATCTTGCATGTGCTTCATAAATTCAAGTCAGCAAGTTATTTTGGGTTCAAAGGGCCCTaGGTCTCCTCCAGCCACTCT +
Preference number: 4 (lower is better)
Translates to: FSRAILHVLHKFKSASYFGFKGP*VSSSHS
Trigger: AGAGTGGCTGGAGGAGACCCAGGGCCCTTTGAACCC...AAAATAACTTGCTGACTTGAATTTATGAAGCACATGCAAGATCGCTCTGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CCA 90 bp CTCAAAACAAACAGAAACGCGTGTTGGGTAAGAATTGAGTTGAAGGACTGGATGACAATGTGGGCTTATTaGGTCATGGGAGCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: LKTNRNACWVRIELKDWMTMWAY*VMGALP
Trigger: GGGCAAAGCTCCCATGACCCAATAAGCCCACATTGT...CATCCAGTCCTTCAACTCAATTCTTACCCAACACGCGTTTCTGTTTGTTTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR CCA 90 bp AAGGTTAGAAACTCTCTTGCAAAGTGCTACCCTCCCGAGTTGCAGAGCTGTGAGAAATCGAAAACCAAATaGATAAAGAGTGCGGAGACC +
Preference number: 4 (lower is better)
Translates to: KVRNSLAKCYPPELQSCEKSKTK*IKSAET
Trigger: GGTCTCCGCACTCTTTATCCATTTGGTTTTCGATTT...CTCACAGCTCTGCAACTCGGGAGGGTAGCACTTTGCAAGAGAGTTTCTAACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CCA 90 bp AATAAAGTGAGGTGTTTCCCCTTTCAGCGTCTCAGAGAAACACAGAACAGGAGAAGCAAGAGGGTGATTTaGGTTGATTGCAGCTACCTC +
Preference number: 4 (lower is better)
Translates to: NKVRCFPFQRLRETQNRRSKRVI*VDCSYL
Trigger: GAGGTAGCTGCAATCAACCCAAATCACCCTCTTGCT...TCTCCTGTTCTGTGTTTCTCTGAGACGCTGAAAGGGGAAACACCTCACTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp AATAAAGTGAGGTGTTTCCCCTTTCAGCGTCTCAGAGAAACACAGAACAGGAGACAGAATGAAGCCACCTaGCTCCTTCACCTCTCAATA +
Preference number: 4 (lower is better)
Translates to: NKVRCFPFQRLRETQNRRQNEAT*LLHLSI
Trigger: TATTGAGAGGTGAAGGAGCCAGGTGGCTTCATTCTG...TCTCCTGTTCTGTGTTTCTCTGAGACGCTGAAAGGGGAAACACCTCACTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp AAGAGAGTGTACCTATTTATGCAGCGTACTTGGATGTTCACAGAAAAGACAACACTCCCGTACCTGCTCTaGGCCCTTGTCGAACATCTT +
Preference number: 4 (lower is better)
Translates to: KRVYLFMQRTWMFTEKTTLPYLL*ALVEHL
Trigger: AAGATGTTCGACAAGGGCCCAGAGCAGGTACGGGAG...TGTTGTCTTTTCTGTGAACATCCAAGTACGCTGCATAAATAGGTACACTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576366.1
3UTR CAA 72 bp TTCTCACTACTGGTTTCTAAAAGGTTAGAAACTCTCTaGCAAAGTGCTACCCTCCCGAGTTGCAGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: FSLLVSKRLETL*QSATLPSCRAV
Trigger: CACAGCTCTGCAACTCGGGAGGGTAGCACTTTGCAAGAGAGTTTCTAACCTTTTAGAAACCAGTAGTGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR TCA 90 bp AAGGTTAGAAACTCTCTTGCAAAGTGCTACCCTCCCGAGTTGCAGAGCTGTGAGGTGTACCAGAATTGGTaGAATAAGAAACAAAAACGG +
Preference number: 4 (lower is better)
Translates to: KVRNSLAKCYPPELQSCEVYQNW*NKKQKR
Trigger: CCGTTTTTGTTTCTTATTTCACCAATTCTGGTACAC...CTCACAGCTCTGCAACTCGGGAGGGTAGCACTTTGCAAGAGAGTTTCTAACCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR GCA 90 bp GCAAAGAGAGTGTACCTATTTATGCAGCGTACTTGGATGTTCACAGAAAAGACAAGCCAGGTAACTCCGTaGTCCTGTTTCGTTACATGG +
Preference number: 4 (lower is better)
Translates to: AKRVYLFMQRTWMFTEKTSQVTP*SCFVTW
Trigger: CCATGTAACGAAACAGGAGCACGGAGTTACCTGGCT...TGTCTTTTCTGTGAACATCCAAGTACGCTGCATAAATAGGTACACTCTCTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS-3UTR GCA 90 bp GCAAAGAGAGTGTACCTATTTATGCAGCGTACTTGGATGTTCACAGAAAAGACACACATTCAGAACAAATaGTCTGCAGTGCAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: AKRVYLFMQRTWMFTEKTHIQNK*SAVQLP
Trigger: GGGCAGCTGCACTGCAGAGCATTTGTTCTGAATGTG...TGTCTTTTCTGTGAACATCCAAGTACGCTGCATAAATAGGTACACTCTCTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS-3UTR CCA 90 bp GTTTCTAAAAGGTTAGAAACTCTCTTGCAAAGTGCTACCCTCCCGAGTTGCAGACTTTGCCCTCTGGTTTaGAGCTACAGTGAAACTCAT +
Preference number: 4 (lower is better)
Translates to: VSKRLETLLQSATLPSCRLCPLV*SYSETH
Trigger: ATGAGTTTCACTGTAGCTCCAAACCAGAGGGCAAAG...TCTGCAACTCGGGAGGGTAGCACTTTGCAAGAGAGTTTCTAACCTTTTAGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR GCA 90 bp TGTTGGTCACTCTCTGCTCTTAGCTTCACATTACCATTTCGTGTTTTGTCAAAGCAAATGGATAAAGAGTaGGGAGACCCTTACTCAGGC +
Preference number: 4 (lower is better)
Translates to: CWSLSALSFTLPFRVLSKQMDKE*GDPYSG
Trigger: GCCTGAGTAAGGGTCTCCGCACTCTTTATCCATTTG...CTTTGACAAAACACGAAATGGTAATGTGAAGCTAAGAGCAGAGAGTGACCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp AGAGAGTGTACCTATTTATGCAGCGTACTTGGATGTTCACAGAAAAGACAACACTCCTGTTTCGTTACATaGAAGCTGCCCAGAATGGTG +
Preference number: 4 (lower is better)
Translates to: RECTYLCSVLGCSQKRQHSCFVT*KLPRMV
Trigger: CACCATTCTGGGCAGCTTCCATGTAACGAAACAGGA...GTGTTGTCTTTTCTGTGAACATCCAAGTACGCTGCATAAATAGGTACACTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS-3UTR GCA 90 bp AGAGCGATCTTGCATGTGCTTCATAAATTCAAGTCAGCAAGTTATTTTCTCACTCGCTGTAGTGCGAACTaGTTGAAGGACTTGACGATC +
Preference number: 4 (lower is better)
Translates to: RAILHVLHKFKSASYFLTRCSAN*LKDLTI
Trigger: GATCGTCAAGTCCTTCAAGCAGTTCGCACTACAGCG...AGTGAGAAAATAACTTGCTGACTTGAATTTATGAAGCACATGCAAGATCGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CCA 90 bp TGTTGGTCACTCTCTGCTCTTAGCTTCACATTACCATTTCGTGTTTTGTCAAAGGTAAATTTGCACCGATaGTTTCCAGAGCTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: CWSLSALSFTLPFRVLSKVNLHR*FPELSE
Trigger: CTCAGAAAGCTCTGGAAACCATCGGTGCAAATTTAC...CTTTGACAAAACACGAAATGGTAATGTGAAGCTAAGAGCAGAGAGTGACCAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp AATAAAGTGAGGTGTTTCCCCTTTCAGCGTCTCAGAGAAACACAGAACAGGAGACTGTTCAGAAATATTTaGTCGTCCAATCTCGTAATG +
Preference number: 4 (lower is better)
Translates to: NKVRCFPFQRLRETQNRRLFRNI*SSNLVM
Trigger: CATTACGAGATTGGACGACCAAATATTTCTGAACAG...TCTCCTGTTCTGTGTTTCTCTGAGACGCTGAAAGGGGAAACACCTCACTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CCA 90 bp CTCAAAACAAACAGAAACGCGTGTTGGGTAAGAATTGAGTTGAAGGACTGGATGAACAGAAACGCGTGTTaGGTAAGAATTGAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: LKTNRNACWVRIELKDWMNRNAC*VRIELK
Trigger: CTTCAACTCAATTCTTACCCAACACGCGTTTCTGTT...CATCCAGTCCTTCAACTCAATTCTTACCCAACACGCGTTTCTGTTTGTTTTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR TCA 90 bp TTCTCCAGAGCGATCTTGCATGTGCTTCATAAATTCAAGTCAGCAAGTTATTTTAAACTAAGGCAACACTaGCTGTCTTCATCCGATCCT +
Preference number: 4 (lower is better)
Translates to: FSRAILHVLHKFKSASYFKLRQH*LSSSDP
Trigger: AGGATCGGATGAAGACAGTCAGTGTTGCCTTAGTTT...AAAATAACTTGCTGACTTGAATTTATGAAGCACATGCAAGATCGCTCTGGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR GCA 90 bp AAGGCAAAGAGAGTGTACCTATTTATGCAGCGTACTTGGATGTTCACAGAAAAGGAGTGTACCTATTTATaGAGCGTACTTGGATGTTCA +
Preference number: 4 (lower is better)
Translates to: KAKRVYLFMQRTWMFTEKECTYL*SVLGCS
Trigger: TGAACATCCAAGTACGCTGCATAAATAGGTACACTC...CTTTTCTGTGAACATCCAAGTACGCTGCATAAATAGGTACACTCTCTTTGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS-3UTR CCA 90 bp AGGCAAAGAGAGTGTACCTATTTATGCAGCGTACTTGGATGTTCACAGAAAAGATTTATGCAGCGTACTTaGATGTTCACAGAAAAGACA +
Preference number: 4 (lower is better)
Translates to: RQRECTYLCSVLGCSQKRFMQRT*MFTEKT
Trigger: TGTCTTTTCTGTGAACATCCAAGTACGCTGCATAAA...TCTTTTCTGTGAACATCCAAGTACGCTGCATAAATAGGTACACTCTCTTTGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS-3UTR GCA 90 bp TTCTCCAGAGCGATCTTGCATGTGCTTCATAAATTCAAGTCAGCAAGTTATTTTGAGCGATCTTGCATGTaGTTCATAAATTCAAGTCAG +
Preference number: 4 (lower is better)
Translates to: FSRAILHVLHKFKSASYFERSCM*FINSSQ
Trigger: CTGACTTGAATTTATGAAGCACATGCAAGATCGCTC...AAAATAACTTGCTGACTTGAATTTATGAAGCACATGCAAGATCGCTCTGGAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CAA 90 bp GTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGGAGCGGGGGCGCAGCGCAGGGCGATCTaGATGGGGGTGGTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: VQAARGAHGGGLQGGAGAQRRAI*MGVVRQ
Trigger: CTGCCTCACCACCCCCATCAAGATCGCCCTGCGCTG...CGCCCCCGCTCCACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp GTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGGAGCGGGGGCGGTCCTCTCTGCAGAGTaGCCCACGAACGTGCCAAGG +
Preference number: 5 (lower is better)
Translates to: VQAARGAHGGGLQGGAGAVLSAE*PTNVPR
Trigger: CCTTGGCACGTTCGTGGGCAACTCTGCAGAGAGGAC...CGCCCCCGCTCCACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS CCA 90 bp CGGCCTCCACCGCCTCAGCAGTTCCGAAGACAGGCAGGCCGCTCTTaGTGCCGGTTCGCCCACTGGGCCGACTGGGCTGAGGTCTCCGGC +
Preference number: 5 (lower is better)
Translates to: RPPPPQQFRRQAGRS*CRFAHWADWAEVSG
Trigger: GCCGGAGACCTCAGCCCAGTCGGCCCAGTGGGCGAACCGGCACCAAGAGCGGCCTGCCTGTCTTCGGAACTGCTGAGGCGGTGGAGGCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306801.8
ENST00000570891.5
ENST00000574767.5
ENST00000577161.5
ENST00000649732.1
CDS TCA 90 bp GGCAGGCCGCTCTTGGTGCCGGTTCGCCCACTGGGCCGACTGGGCTaGGGTCTCCGGCCAAGGGATCGGGTTCAAAGGGCCCTGGGTCTC +
Preference number: 5 (lower is better)
Translates to: GRPLLVPVRPLGRLG*GLRPRDRVQRALGL
Trigger: GAGACCCAGGGCCCTTTGAACCCGATCCCTTGGCCGGAGACCTCAGCCCAGTCGGCCCAGTGGGCGAACCGGCACCAAGAGCGGCCTGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306801.8
ENST00000570891.5
ENST00000574767.5
ENST00000577161.5
ENST00000649732.1
CDS TCA 90 bp CAGCGGGGCCTGTGGTGCCCGGCCGGCCAGAAGGCAAGTCTCGGCTaGCCGGCTGCTTGGCCACATCGTTGGTCAGGCTGGAGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: QRGLWCPAGQKASLG*PAAWPHRWSGWSCW
Trigger: CCAGCAGCTCCAGCCTGACCAACGATGTGGCCAAGCAGCCGGTCAGCCGAGACTTGCCTTCTGGCCGGCCGGGCACCACAGGCCCCGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000575542.5
ENST00000576366.1
CDS GCA 90 bp CTGAGCTGCTGCAACCAGAGCCACGACCGGCCCATCGTGCTCGCCTaGACCCGGTTCCTCAACCTCAGGTCCGCGCGGCCTGGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: LSCCNQSHDRPIVLA*TRFLNLRSARPGWS
Trigger: GGACCAGCCAGGCCGCGCGGACCTGAGGTTGAGGAACCGGGTGCAGGCGAGCACGATGGGCCGGTCGTGGCTCTGGTTGCAGCAGCTCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306801.8
ENST00000570891.5
ENST00000574767.5
ENST00000577161.5
ENST00000649732.1
CDS GCA 90 bp TCCAGCCACTCTCAGCCCTGCGGGTCCCGCACTCGTCTGAGCTGCTaGAACCAGAGCCACGACCGGCCCATCGTGCTCGCCTGCACCCGG +
Preference number: 5 (lower is better)
Translates to: SSHSQPCGSRTRLSC*NQSHDRPIVLACTR
Trigger: CCGGGTGCAGGCGAGCACGATGGGCCGGTCGTGGCTCTGGTTGCAGCAGCTCAGACGAGTGCGGGACCCGCAGGGCTGAGAGTGGCTGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306801.8
ENST00000570891.5
ENST00000574767.5
ENST00000577161.5
ENST00000649732.1
CDS-3UTR CAA 90 bp CACAGGTCGGGCTGCTGTCCCCGCGCCTGTGGGGAAGAGCAGCCCTTCGGAGGGGGGGTGGGGGAGTCCTaGGCAGCAAGCGCTCGAGAA +
Preference number: 5 (lower is better)
Translates to: HRSGCCPRACGEEQPFGGGVGES*AASARE
Trigger: TTCTCGAGCGCTTGCTGCCAAGGACTCCCCCACCCC...CCCTCCGAAGGGCTGCTCTTCCCCACAGGCGCGGGGACAGCAGCCCGACCTGTG
70% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp GCCGGGCCTCGCCACACCAGCTCTCACTCCCGTGGTCGTGGGCCTCTCACCGCCCGCTCCTCCTTGGCGTaGCGACGTAAGGACGTGCAG +
Preference number: 5 (lower is better)
Translates to: AGPRHTSSHSRGRGPLTARSSLA*RRKDVQ
Trigger: CTGCACGTCCTTACGTCGCAACGCCAAGGAGGAGCG...GGCGGTGAGAGGCCCACGACCACGGGAGTGAGAGCTGGTGTGGCGAGGCCCGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp AGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACCCGGATGTGCACGCCCTTGTaGGTGGGGCTGGCGGGGGCC +
Preference number: 5 (lower is better)
Translates to: RSHQHGRLKAGDGAGVTRMCTPL*VGLAGA
Trigger: GGCCCCCGCCAGCCCCACCAACAAGGGCGTGCACAT...CCGGGTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS TCA 90 bp GGGTCTCCTCCAGCCACTCTCAGCCCTGCGGGTCCCGCACTCGTCTaGGCTGCTGCAACCAGAGCCACGACCGGCCCATCGTGCTCGCCT +
Preference number: 5 (lower is better)
Translates to: GSPPATLSPAGPALV*AAATRATTGPSCSP
Trigger: AGGCGAGCACGATGGGCCGGTCGTGGCTCTGGTTGCAGCAGCTCAGACGAGTGCGGGACCCGCAGGGCTGAGAGTGGCTGGAGGAGACCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306801.8
ENST00000570891.5
ENST00000574767.5
ENST00000577161.5
ENST00000649732.1
CDS GCA 90 bp TCCTCCAGCCACTCTCAGCCCTGCGGGTCCCGCACTCGTCTGAGCTaGTGCAACCAGAGCCACGACCGGCCCATCGTGCTCGCCTGCACC +
Preference number: 5 (lower is better)
Translates to: SSSHSQPCGSRTRLS*CNQSHDRPIVLACT
Trigger: GGTGCAGGCGAGCACGATGGGCCGGTCGTGGCTCTGGTTGCAGCAGCTCAGACGAGTGCGGGACCCGCAGGGCTGAGAGTGGCTGGAGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306801.8
ENST00000570891.5
ENST00000574767.5
ENST00000577161.5
ENST00000649732.1
CDS GCA 90 bp CCTCCACCGCCTCAGCAGTTCCGAAGACAGGCAGGCCGCTCTTGGTaGCGGTTCGCCCACTGGGCCGACTGGGCTGAGGTCTCCGGCCAA +
Preference number: 5 (lower is better)
Translates to: PPPPQQFRRQAGRSW*RFAHWADWAEVSGQ
Trigger: TTGGCCGGAGACCTCAGCCCAGTCGGCCCAGTGGGCGAACCGGCACCAAGAGCGGCCTGCCTGTCTTCGGAACTGCTGAGGCGGTGGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306801.8
ENST00000570891.5
ENST00000574767.5
ENST00000577161.5
ENST00000649732.1
CDS GCA 90 bp CCCTCACGCCGCACCACCTCGCCGAGTCGAAGTTCTGCCAGATCCTaGCGAGGCAGATGGCCACCCACTGGCGCAGCAAGGGGTGCGGGT +
Preference number: 5 (lower is better)
Translates to: PSRRTTSPSRSSARS*RGRWPPTGAARGAG
Trigger: ACCCGCACCCCTTGCTGCGCCAGTGGGTGGCCATCTGCCTCGGCAGGATCTGGCAGAACTTCGACTCGGCGAGGTGGTGCGGCGTGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000575542.5
ENST00000577161.5
CDS CCA 90 bp AGACAGGCAGGCCGCTCTTGGTGCCGGTTCGCCCACTGGGCCGACTaGGCTGAGGTCTCCGGCCAAGGGATCGGGTTCAAAGGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: RQAGRSWCRFAHWAD*AEVSGQGIGFKGPW
Trigger: CCAGGGCCCTTTGAACCCGATCCCTTGGCCGGAGACCTCAGCCCAGTCGGCCCAGTGGGCGAACCGGCACCAAGAGCGGCCTGCCTGTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306801.8
ENST00000570891.5
ENST00000574767.5
ENST00000577161.5
ENST00000649732.1
CDS-3UTR CAA 90 bp GGAGGGGCCGCCTCTGTCCTGCCTTGTCACGTCCCGGCCAGCCCCAGCTCAGTCCTGGCGCGGCGCATCTaGTCGATGGTCTCGAAGGAC +
Preference number: 5 (lower is better)
Translates to: GGAASVLPCHVPASPSSVLARRI*SMVSKD
Trigger: GTCCTTCGAGACCATCGACAAGATGCGCCGCGCCAG...GACTGAGCTGGGGCTGGCCGGGACGTGACAAGGCAGGACAGAGGCGGCCCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS GCA 90 bp CGCGCGGCCTGGCTGGTCCTGGCCTTCAGCCCCGAGGCTCTCTCCTaGCTGAGAACGAGTCCTGAGAAACGGGCGACACGGAACCACGGA +
Preference number: 5 (lower is better)
Translates to: RAAWLVLAFSPEALS*LRTSPEKRATRNHG
Trigger: TCCGTGGTTCCGTGTCGCCCGTTTCTCAGGACTCGTTCTCAGGCAGGAGAGAGCCTCGGGGCTGAAGGCCAGGACCAGCCAGGCCGCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306801.8
ENST00000570891.5
ENST00000574767.5
ENST00000577161.5
ENST00000649732.1
CDS GCA 90 bp CCTGTGGTGCCCGGCCGGCCAGAAGGCAAGTCTCGGCTGACCGGCTaGTTGGCCACATCGTTGGTCAGGCTGGAGCTGCTGGTGCTGGAC +
Preference number: 5 (lower is better)
Translates to: PVVPGRPEGKSRLTG*LATSLVRLELLVLD
Trigger: GTCCAGCACCAGCAGCTCCAGCCTGACCAACGATGTGGCCAAGCAGCCGGTCAGCCGAGACTTGCCTTCTGGCCGGCCGGGCACCACAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000575542.5
ENST00000576366.1
CDS GCA 90 bp GAGTGCAGGCAGAGGGGTGCACGAGTGAGGACCAGCACCCGGGTCTaGAAAGGCAGAGAGTGGCCCACAGACCCAGGACGGCAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: ECRQRGARVRTSTRV*KGREWPTDPGRQGG
Trigger: CCCACCCTGCCGTCCTGGGTCTGTGGGCCACTCTCTGCCTTTGCAGACCCGGGTGCTGGTCCTCACTCGTGCACCCCTCTGCCTGCACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS CCA 90 bp GACTGGGCTGAGGTCTCCGGCCAAGGGATCGGGTTCAAAGGGCCCTaGGTCTCCTCCAGCCACTCTCAGCCCTGCGGGTCCCGCACTCGT +
Preference number: 5 (lower is better)
Translates to: DWAEVSGQGIGFKGP*VSSSHSQPCGSRTR
Trigger: ACGAGTGCGGGACCCGCAGGGCTGAGAGTGGCTGGAGGAGACCCAGGGCCCTTTGAACCCGATCCCTTGGCCGGAGACCTCAGCCCAGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306801.8
ENST00000570891.5
ENST00000574767.5
ENST00000577161.5
ENST00000649732.1
CDS CCA 90 bp CGTGCCCCGGCGAGTGACAGCTTCACTATGTACAGCAGGCGGCCGTaGCCTGGTGGGCCCGGGTCACGCCGCTATCTGACACGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: RAPASDSFTMYSRRP*PGGPGSRRYLTRFS
Trigger: GGAGAAGCGTGTCAGATAGCGGCGTGACCCGGGCCCACCAGGCCACGGCCGCCTGCTGTACATAGTGAAGCTGTCACTCGCCGGGGCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000575542.5
CDS-3UTR CAA 90 bp GCTCCGTGCAATTCCATGACATCACAGTGCCACGGAGGGCGGGGGAGCACGGCAACCCAGACCTCCCCGTaGACTGTGGGCCGGGGCACC +
Preference number: 5 (lower is better)
Translates to: APCNSMTSQCHGGRGSTATQTSP*TVGRGT
Trigger: GGTGCCCCGGCCCACAGTCAACGGGGAGGTCTGGGT...TGCCGTGCTCCCCCGCCCTCCGTGGCACTGTGATGTCATGGAATTGCACGGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CAA 90 bp CCCCGTGCCCCGGCGAGTGACAGCTTCACTATGTACAGCAGGCGGCCGTGGCCTCAGCGCAGGGCGATCTaGATGGGGGTGGTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: PRAPASDSFTMYSRRPWPQRRAI*MGVVRQ
Trigger: CTGCCTCACCACCCCCATCAAGATCGCCCTGCGCTG...AGGCCACGGCCGCCTGCTGTACATAGTGAAGCTGTCACTCGCCGGGGCACGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp CCCCGGCGAGTGACAGCTTCACTATGTACAGCAGGCGGCCGTGGCCTGGTGGGCCGGCTGACCGGCTGCTaGGCCACATCGTTGGTCAGG +
Preference number: 5 (lower is better)
Translates to: PRRVTASLCTAGGRGLVGRLTGC*ATSLVR
Trigger: CCTGACCAACGATGTGGCCAAGCAGCCGGTCAGCCG...GCCCACCAGGCCACGGCCGCCTGCTGTACATAGTGAAGCTGTCACTCGCCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp GCCGGGCCTCGCCACACCAGCTCTCACTCCCGTGGTCGTGGGCCTCTCACCGCCGTCTGCTCTGGGCCCTaGTCGAACATCTTCCGTGTC +
Preference number: 5 (lower is better)
Translates to: AGPRHTSSHSRGRGPLTAVCSGP*SNIFRV
Trigger: GACACGGAAGATGTTCGACAAGGGCCCAGAGCAGAC...GGCGGTGAGAGGCCCACGACCACGGGAGTGAGAGCTGGTGTGGCGAGGCCCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp AGACAGCCCACGTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGAAGCAGATGCTGTCCTaGTCGGCTACGGCGATGCAC +
Preference number: 5 (lower is better)
Translates to: RQPTCRRHAVPMGVGSRVKQMLS*SATAMH
Trigger: GTGCATCGCCGTAGCCGACAAGGACAGCATCTGCTT...CACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCACGTGGGCTGTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp AGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACCCGGCAGCTCCTCGCGTCGTaGGCAGCATGTCCGAGAGCC +
Preference number: 5 (lower is better)
Translates to: RSHQHGRLKAGDGAGVTRQLLAS*AACPRA
Trigger: GGCTCTCGGACATGCTGCCAACGACGCGAGGAGCTG...CCGGGTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp GCCGGGCCTCGCCACACCAGCTCTCACTCCCGTGGTCGTGGGCCTCTCACCGCCACCCGGCAGTGCCTCTaGCCTGTATGTGAGGAACGT +
Preference number: 5 (lower is better)
Translates to: AGPRHTSSHSRGRGPLTATRQCL*PVCEER
Trigger: ACGTTCCTCACATACAGGCAAGAGGCACTGCCGGGT...GGCGGTGAGAGGCCCACGACCACGGGAGTGAGAGCTGGTGTGGCGAGGCCCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp GAGCAGCCCTTCGGAGGGAAAGGAGCCCCGTGGATTAAGGCAGGGGCTACCTCGCGCCTCTGTCCTGCCTaGTCACGTCCCGGCCAGCCC +
Preference number: 5 (lower is better)
Translates to: EQPFGGKGAPWIKAGATSRLCPA*SRPGQP
Trigger: GGGCTGGCCGGGACGTGACAAGGCAGGACAGAGGCG...CGAGGTAGCCCCTGCCTTAATCCACGGGGCTCCTTTCCCTCCGAAGGGCTGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS GCA 90 bp CGGACGATCCGCACGTCTCCTGAGCTCATGAGGAGGCCGGTCTCCTaGTCCCAGTCCACCACCATCCCAGCTCCTCGCGTCGTTGGCAGC +
Preference number: 5 (lower is better)
Translates to: RTIRTSPELMRRPVS*SQSTTIPAPRVVGS
Trigger: GCTGCCAACGACGCGAGGAGCTGGGATGGTGGTGGACTGGGAGCAGGAGACCGGCCTCCTCATGAGCTCAGGAGACGTGCGGATCGTCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000573163.1
ENST00000575542.5
CDS-3UTR CAA 90 bp GAGCAGCCCTTCGGAGGGAAAGGAGCCCCGTGGATTAAGGCAGGGGCTACCTCGACAGGCAGGCCGCTCTaGGTGCCGGTTCGCCCACTG +
Preference number: 5 (lower is better)
Translates to: EQPFGGKGAPWIKAGATSTGRPL*VPVRPL
Trigger: CAGTGGGCGAACCGGCACCAAGAGCGGCCTGCCTGT...CGAGGTAGCCCCTGCCTTAATCCACGGGGCTCCTTTCCCTCCGAAGGGCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR CAA 90 bp GGCTTCAGCCGGCCGCTGCTCCCGTGCAGTCCTAAAAGGCCCTCCAAGGCTTCTACAGGCAGGCCGCTCTaGGTGCCGGTTCGCCCACTG +
Preference number: 5 (lower is better)
Translates to: GFSRPLLPCSPKRPSKASTGRPL*VPVRPL
Trigger: CAGTGGGCGAACCGGCACCAAGAGCGGCCTGCCTGT...AGAAGCCTTGGAGGGCCTTTTAGGACTGCACGGGAGCAGCGGCCGGCTGAAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CAA 90 bp AGGGCTCGGCATCCCCAGAAGGGCCGGCAGGTTCACATCACTCTGGGGAGGAGGGGGGTGGGGGAGTCCTaGGCAGCAAGCGCTCGAGAA +
Preference number: 5 (lower is better)
Translates to: RARHPQKGRQVHITLGRRGVGES*AASARE
Trigger: TTCTCGAGCGCTTGCTGCCAAGGACTCCCCCACCCC...CCTCCTCCCCAGAGTGATGTGAACCTGCCGGCCCTTCTGGGGATGCCGAGCCCT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CAA 90 bp CGCAGCAGCCGACGCCCCGTGCCCCGGCGAGTGACAGCTTCACTATGTACAGCAGGGTCAAGGCTCTGCTaGTACCGGGCCCTTGGCTGC +
Preference number: 5 (lower is better)
Translates to: RSSRRPVPRRVTASLCTAGSRLC*YRALGC
Trigger: GCAGCCAAGGGCCCGGTACAAGCAGAGCCTTGACCC...TGCTGTACATAGTGAAGCTGTCACTCGCCGGGGCACGGGGCGTCGGCTGCTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp CCCCGTGCCCCGGCGAGTGACAGCTTCACTATGTACAGCAGGCGGCCGTGGCCTAAGGGGTGCGGGTCGTaGAGCTGCTCCAGGCAGATG +
Preference number: 5 (lower is better)
Translates to: PRAPASDSFTMYSRRPWPKGCGS*SCSRQM
Trigger: CATCTGCCTGGAGCAGCTCAACGACCCGCACCCCTT...AGGCCACGGCCGCCTGCTGTACATAGTGAAGCTGTCACTCGCCGGGGCACGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR CAA 90 bp GACCCGGGCTGCTTTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTCAGCTCCTCGCGTCGTaGGCAGCATGTCCGAGAGCC +
Preference number: 5 (lower is better)
Translates to: DPGCFLGPDVGMGFVPEPQLLAS*AACPRA
Trigger: GGCTCTCGGACATGCTGCCAACGACGCGAGGAGCTG...AGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAAAGCAGCCCGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS TCA 90 bp CGGCCTGGCTGGTCCTGGCCTTCAGCCCCGAGGCTCTCTCCTGCCTaGGAACGAGTCCTGAGAAACGGGCGACACGGAACCACGGAGGAA +
Preference number: 5 (lower is better)
Translates to: RPGWSWPSAPRLSPA*ERVLRNGRHGTTEE
Trigger: TTCCTCCGTGGTTCCGTGTCGCCCGTTTCTCAGGACTCGTTCTCAGGCAGGAGAGAGCCTCGGGGCTGAAGGCCAGGACCAGCCAGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306801.8
ENST00000570891.5
ENST00000574767.5
ENST00000577161.5
ENST00000649732.1
CDS TCA 90 bp TCACAGTGCCACGGAGGGCGGGGGAGCACGGCACCTGGAGGATCCTaGAACACTCACCACATGGCGTGCATGTACGTGGGCGGCAGACGC +
Preference number: 5 (lower is better)
Translates to: SQCHGGRGSTAPGGS*NTHHMACMYVGGRR
Trigger: GCGTCTGCCGCCCACGTACATGCACGCCATGTGGTGAGTGTTTCAGGATCCTCCAGGTGCCGTGCTCCCCCGCCCTCCGTGGCACTGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS GCA 90 bp TGGTGGTGGAGTGGTCCGTCCTCTCTGCAGAGTTGCCCACGAACGTaGCAAGGGCGAAGACCGCTGCGCAGCGGACCTCGGGAATGGGGT +
Preference number: 5 (lower is better)
Translates to: WWWSGPSSLQSCPRT*QGRRPLRSGPREWG
Trigger: ACCCCATTCCCGAGGTCCGCTGCGCAGCGGTCTTCGCCCTTGGCACGTTCGTGGGCAACTCTGCAGAGAGGACGGACCACTCCACCACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000575542.5
ENST00000577161.5
CDS CCA 90 bp CAGTTCCGAAGACAGGCAGGCCGCTCTTGGTGCCGGTTCGCCCACTaGGCCGACTGGGCTGAGGTCTCCGGCCAAGGGATCGGGTTCAAA +
Preference number: 5 (lower is better)
Translates to: QFRRQAGRSWCRFAH*ADWAEVSGQGIGFK
Trigger: TTTGAACCCGATCCCTTGGCCGGAGACCTCAGCCCAGTCGGCCCAGTGGGCGAACCGGCACCAAGAGCGGCCTGCCTGTCTTCGGAACTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306801.8
ENST00000570891.5
ENST00000574767.5
ENST00000577161.5
ENST00000649732.1
CDS CCA 90 bp GGGCTCCCGTCGCTGACCAGCTGGGCCAGCATCATGGCCACGTTGTaGTCGATGGTGGTGGAGTGGTCCGTCCTCTCTGCAGAGTTGCCC +
Preference number: 5 (lower is better)
Translates to: GLPSLTSWASIMATL*SMVVEWSVLSAELP
Trigger: GGGCAACTCTGCAGAGAGGACGGACCACTCCACCACCATCGACCACAACGTGGCCATGATGCTGGCCCAGCTGGTCAGCGACGGGAGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000575542.5
ENST00000577161.5
CDS CCA 90 bp ACCACCAGCTCCTTCCGGACCATGGGGCTCCCGTCGCTGACCAGCTaGGCCAGCATCATGGCCACGTTGTGGTCGATGGTGGTGGAGTGG +
Preference number: 5 (lower is better)
Translates to: TTSSFRTMGLPSLTS*ASIMATLWSMVVEW
Trigger: CCACTCCACCACCATCGACCACAACGTGGCCATGATGCTGGCCCAGCTGGTCAGCGACGGGAGCCCCATGGTCCGGAAGGAGCTGGTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000575542.5
ENST00000577161.5
CDS-3UTR CAA 90 bp TTCAGCCGGCCGCTGCTCCCGTGCAGTCCTAAAAGGCCCTCCAAGGCTTCTGCCGGGGTGGGGGAGTCCTaGGCAGCAAGCGCTCGAGAA +
Preference number: 5 (lower is better)
Translates to: FSRPLLPCSPKRPSKASAGVGES*AASARE
Trigger: TTCTCGAGCGCTTGCTGCCAAGGACTCCCCCACCCC...GGCAGAAGCCTTGGAGGGCCTTTTAGGACTGCACGGGAGCAGCGGCCGGCTGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CAA 90 bp CCCCGGCGAGTGACAGCTTCACTATGTACAGCAGGCGGCCGTGGCCTGGTGGGCGCTTGTACCGGGCCCTaGGCTGCCAGTTCTCGTACT +
Preference number: 5 (lower is better)
Translates to: PRRVTASLCTAGGRGLVGACTGP*AASSRT
Trigger: AGTACGAGAACTGGCAGCCAAGGGCCCGGTACAAGC...GCCCACCAGGCCACGGCCGCCTGCTGTACATAGTGAAGCTGTCACTCGCCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp AGACAGCCCACGTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGGACGTGCAGAGCTTCTaGACTTCATCCACAGTTGGG +
Preference number: 5 (lower is better)
Translates to: RQPTCRRHAVPMGVGSRVDVQSF*TSSTVG
Trigger: CCCAACTGTGGATGAAGTCAAGAAGCTCTGCACGTC...CACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCACGTGGGCTGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp AGCTCCGTGCAATTCCATGACATCACAGTGCCACGGAGGGCGGGGGAGCACGGCCAGCGCAGGGCGATCTaGATGGGGGTGGTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: SSVQFHDITVPRRAGEHGQRRAI*MGVVRQ
Trigger: CTGCCTCACCACCCCCATCAAGATCGCCCTGCGCTG...GCCGTGCTCCCCCGCCCTCCGTGGCACTGTGATGTCATGGAATTGCACGGAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CAA 90 bp GGAGGGGCCGCCTCTGTCCTGCCTTGTCACGTCCCGGCCAGCCCCAGCTCAGTCAAGTACTTGTGGCCGTaGTCCTTCACGAGGTCCGCT +
Preference number: 5 (lower is better)
Translates to: GGAASVLPCHVPASPSSVKYLWP*SFTRSA
Trigger: AGCGGACCTCGTGAAGGACAACGGCCACAAGTACTT...GACTGAGCTGGGGCTGGCCGGGACGTGACAAGGCAGGACAGAGGCGGCCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR CAA 90 bp GACCCGGGCTGCTTTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTCTGGCGCGGCGCATCTaGTCGATGGTCTCGAAGGAC +
Preference number: 5 (lower is better)
Translates to: DPGCFLGPDVGMGFVPEPLARRI*SMVSKD
Trigger: GTCCTTCGAGACCATCGACAAGATGCGCCGCGCCAG...AGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAAAGCAGCCCGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp GCCGGGCCTCGCCACACCAGCTCTCACTCCCGTGGTCGTGGGCCTCTCACCGCCATGCGCACATCTCCATaGACGCTCACACTCACGATG +
Preference number: 5 (lower is better)
Translates to: AGPRHTSSHSRGRGPLTAMRTSP*TLTLTM
Trigger: CATCGTGAGTGTGAGCGTCAATGGAGATGTGCGCAT...GGCGGTGAGAGGCCCACGACCACGGGAGTGAGAGCTGGTGTGGCGAGGCCCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS TCA 90 bp GGTCTGTGTCCCAGATCCGGACGATCCGCACGTCTCCTGAGCTCATaGGGAGGCCGGTCTCCTGCTCCCAGTCCACCACCATCCCAGCTC +
Preference number: 5 (lower is better)
Translates to: GLCPRSGRSARLLSS*GGRSPAPSPPPSQL
Trigger: GAGCTGGGATGGTGGTGGACTGGGAGCAGGAGACCGGCCTCCTCATGAGCTCAGGAGACGTGCGGATCGTCCGGATCTGGGACACAGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000573163.1
ENST00000575542.5
CDS TCA 90 bp CACCCAGCAGTGCTCCTAAGGAGTGCAGGCAGAGGGGTGCACGAGTaGGGACCAGCACCCGGGTCTGCAAAGGCAGAGAGTGGCCCACAG +
Preference number: 5 (lower is better)
Translates to: HPAVLLRSAGRGVHE*GPAPGSAKAESGPQ
Trigger: CTGTGGGCCACTCTCTGCCTTTGCAGACCCGGGTGCTGGTCCTCACTCGTGCACCCCTCTGCCTGCACTCCTTAGGAGCACTGCTGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS GCA 90 bp CAGATCCTGCCGAGGCAGATGGCCACCCACTGGCGCAGCAAGGGGTaGGGGTCGTTGAGCTGCTCCAGGCAGATGGCAATGAGGTTTCCC +
Preference number: 5 (lower is better)
Translates to: QILPRQMATHWRSKG*GSLSCSRQMAMRFP
Trigger: GGGAAACCTCATTGCCATCTGCCTGGAGCAGCTCAACGACCCGCACCCCTTGCTGCGCCAGTGGGTGGCCATCTGCCTCGGCAGGATCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000575542.5
ENST00000577161.5
CDS GCA 90 bp CGTTGTGGTCGATGGTGGTGGAGTGGTCCGTCCTCTCTGCAGAGTTaGCCACGAACGTGCCAAGGGCGAAGACCGCTGCGCAGCGGACCT +
Preference number: 5 (lower is better)
Translates to: RCGRWWWSGPSSLQS*PRTCQGRRPLRSGP
Trigger: AGGTCCGCTGCGCAGCGGTCTTCGCCCTTGGCACGTTCGTGGGCAACTCTGCAGAGAGGACGGACCACTCCACCACCATCGACCACAACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000575542.5
ENST00000577161.5
CDS GCA 90 bp GAGCTGGCGCGGCGCATCTTGTCGATGGTCTCGAAGGACAGGATATaGTCCTCATTCTCGGGGCTGCCCAGGGTGCTGCTGGCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: ELARRILSMVSKDRI*SSFSGLPRVLLALL
Trigger: CAGCAGCGCCAGCAGCACCCTGGGCAGCCCCGAGAATGAGGAGCATATCCTGTCCTTCGAGACCATCGACAAGATGCGCCGCGCCAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000575542.5
ENST00000577161.5
CDS CCA 90 bp GAGTCGAAGTTCTGCCAGATCCTGCCGAGGCAGATGGCCACCCACTaGCGCAGCAAGGGGTGCGGGTCGTTGAGCTGCTCCAGGCAGATG +
Preference number: 5 (lower is better)
Translates to: ESKFCQILPRQMATH*RSKGCGSLSCSRQM
Trigger: CATCTGCCTGGAGCAGCTCAACGACCCGCACCCCTTGCTGCGCCAGTGGGTGGCCATCTGCCTCGGCAGGATCTGGCAGAACTTCGACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000575542.5
ENST00000577161.5
CDS CCA 90 bp GACACTCATGTCTGTCACGTGGGCTCCTGGGACCAGGTGAATGCCTaGGGCCCACATGGGTTGGGGTCCCTGCGGGAGAGCCCAGTTGAG +
Preference number: 5 (lower is better)
Translates to: DTHVCHVGSWDQVNA*GPHGLGSLRESPVE
Trigger: CTCAACTGGGCTCTCCCGCAGGGACCCCAACCCATGTGGGCCCCAGGCATTCACCTGGTCCCAGGAGCCCACGTGACAGACATGAGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649732.1
CDS-3UTR CAA 90 bp TACCCTCCCGAGTTGCAGAGCTGTGAGGCTTCAGCCGGCCGCTGCTCCCGTGCAAGGACTCGCTCCTCCTaGGCGTTGCGACGTAAGGAC +
Preference number: 5 (lower is better)
Translates to: YPPELQSCEASAGRCSRARTRSS*ALRRKD
Trigger: GTCCTTACGTCGCAACGCCAAGGAGGAGCGAGTCCT...TGCACGGGAGCAGCGGCCGGCTGAAGCCTCACAGCTCTGCAACTCGGGAGGGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CAA 90 bp GACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTGCCGTCATCAGCAGACCCAGACCTCCCCGTaGACTGTGGGCCGGGGCACC +
Preference number: 5 (lower is better)
Translates to: DSEDRQKRVAGPSCRHQQTQTSP*TVGRGT
Trigger: GGTGCCCCGGCCCACAGTCAACGGGGAGGTCTGGGT...CTGCTGATGACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp TGCATGTACGTGGGCGGCAGACGCGGGCTGCTGACGGGAGTGCAGTTATACGACCAGCGCAGGGCGATCTaGATGGGGGTGGTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: CMYVGGRRGLLTGVQLYDQRRAI*MGVVRQ
Trigger: CTGCCTCACCACCCCCATCAAGATCGCCCTGCGCTG...GTCGTATAACTGCACTCCCGTCAGCAGCCCGCGTCTGCCGCCCACGTACATGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CAA 90 bp ACGGCAGGCCACCAGCCACACCGCAGGAGAGCCGGGCCTCGCCACACCAGCTCTTCCACTGCGAGGATCTaGGCCCAGATGAAAACGAGA +
Preference number: 5 (lower is better)
Translates to: TAGHQPHRRRAGPRHTSSSTARI*AQMKTR
Trigger: TCTCGTTTTCATCTGGGCCAAGATCCTCGCAGTGGA...AGAGCTGGTGTGGCGAGGCCCGGCTCTCCTGCGGTGTGGCTGGTGGCCTGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp CCCCAGCTGGCTAGGAAATGTCCCTGCTTGCGTGCACTGACTGTGAGAGGTGGTATGTGCACGCCCTTGTaGGTGGGGCTGGCGGGGGCC +
Preference number: 5 (lower is better)
Translates to: PQLARKCPCLRALTVRGGMCTPL*VGLAGA
Trigger: GGCCCCCGCCAGCCCCACCAACAAGGGCGTGCACAT...ACCACCTCTCACAGTCAGTGCACGCAAGCAGGGACATTTCCTAGCCAGCTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp TTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGATGGATGTGCACGCCCTaGTTGGTGGGGCTGGCGGGG +
Preference number: 5 (lower is better)
Translates to: FSAQTWGWDSCRNLLLVGWMCTP*LVGLAG
Trigger: CCCCGCCAGCCCCACCAACAAGGGCGTGCACATCCA...TCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS TCA 90 bp GGTCCGCTTGGCACGAGCTGTCCACTGCGAGGATCTTGGCCCAGATaGAAACGAGAAGTGGCCGCAGCTCTCGGGCCGAGCTCTGGAGCA +
Preference number: 5 (lower is better)
Translates to: GPLGTSCPLRGSWPR*KREVAAALGPSSGA
Trigger: TGCTCCAGAGCTCGGCCCGAGAGCTGCGGCCACTTCTCGTTTTCATCTGGGCCAAGATCCTCGCAGTGGACAGCTCGTGCCAAGCGGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000575542.5
ENST00000577161.5
CDS TCA 90 bp AGCGGGCGCTCCAGTCGCAGAACCCCGTCTGCACCGTGGCGGAGATaGAACTTTTGTGTCCAGCAGCATCGTCCGCGTCGTCCGCAGTCT +
Preference number: 5 (lower is better)
Translates to: SGRSSRRTPSAPWRR*NFCVQQHRPRRPQS
Trigger: AGACTGCGGACGACGCGGACGATGCTGCTGGACACAAAAGTTTCATCTCCGCCACGGTGCAGACGGGGTTCTGCGACTGGAGCGCCCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000575542.5
CDS TCA 90 bp GAGCCACCACCAGCTCGCTGTCCACTGCGAGGATCTTGGCCCAGATaGAAACGAGAAGTGGCCGCAGCTCTCGGGCCGAGCTCTGGAGCA +
Preference number: 5 (lower is better)
Translates to: EPPPARCPLRGSWPR*KREVAAALGPSSGA
Trigger: TGCTCCAGAGCTCGGCCCGAGAGCTGCGGCCACTTCTCGTTTTCATCTGGGCCAAGATCCTCGCAGTGGACAGCGAGCTGGTGGTGGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544334.6
CDS GCA 90 bp CATGGCCACGTTGTGGTCGATGGTGGTGGAGTGGTCCGTCCTCTCTaGAGAGTTGCCCACGAACGTGCCAAGGGCGAAGACCGCTGCGCA +
Preference number: 5 (lower is better)
Translates to: HGHVVVDGGGVVRPL*RVAHERAKGEDRCA
Trigger: TGCGCAGCGGTCTTCGCCCTTGGCACGTTCGTGGGCAACTCTGCAGAGAGGACGGACCACTCCACCACCATCGACCACAACGTGGCCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000575542.5
ENST00000577161.5
CDS CCA 90 bp AGCTGGGCCAGCATCATGGCCACGTTGTGGTCGATGGTGGTGGAGTaGTCCGTCCTCTCTGCAGAGTTGCCCACGAACGTGCCAAGGGCG +
Preference number: 5 (lower is better)
Translates to: SWASIMATLWSMVVE*SVLSAELPTNVPRA
Trigger: CGCCCTTGGCACGTTCGTGGGCAACTCTGCAGAGAGGACGGACCACTCCACCACCATCGACCACAACGTGGCCATGATGCTGGCCCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000575542.5
ENST00000577161.5
CDS CCA 90 bp ACGCGGATGGAGCCGTCACCGAGGCCAGCCACGATGAGTGAGCGGTaGGAATCACAGGACAGACTCGTCACACAGCTGTCTGCGCCCGTA +
Preference number: 5 (lower is better)
Translates to: TRMEPSPRPATMSER*ESQDRLVTQLSAPV
Trigger: TACGGGCGCAGACAGCTGTGTGACGAGTCTGTCCTGTGATTCCCACCGCTCACTCATCGTGGCTGGCCTCGGTGACGGCTCCATCCGCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000573163.1
ENST00000575542.5
CDS CCA 90 bp TCTCAGTGTCCAGATCACCAGGCAGCCGGGCTCCCGTACCTGCTCTaGGCCCTTGTCGAACATCTTCCGTGTCCGGGGGAACTGGTGGGA +
Preference number: 5 (lower is better)
Translates to: SQCPDHQAAGLPYLL*ALVEHLPCPGELVG
Trigger: TCCCACCAGTTCCCCCGGACACGGAAGATGTTCGACAAGGGCCCAGAGCAGGTACGGGAGCCCGGCTGCCTGGTGATCTGGACACTGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS-3UTR CAA 90 bp GCCGAGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACGCCCAGAAGAGGCGATaGCAGCATTTCGGACTCCAT +
Preference number: 5 (lower is better)
Translates to: AEVASAWAAQGWRRGWCHAQKRR*QHFGLH
Trigger: ATGGAGTCCGAAATGCTGCAATCGCCTCTTCTGGGC...GTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCTCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp GGCTGGAGAAAGGGCAGGCTGGAAACGCAGGGCTCGGCATCCCCAGAAGGGCCGGCCCAGAAGAGGCGATaGCAGCATTTCGGACTCCAT +
Preference number: 5 (lower is better)
Translates to: GWRKGRLETQGSASPEGPAQKRR*QHFGLH
Trigger: ATGGAGTCCGAAATGCTGCAATCGCCTCTTCTGGGC...CGGCCCTTCTGGGGATGCCGAGCCCTGCGTTTCCAGCCTGCCCTTTCTCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CAA 90 bp GGTTCACATCACTCTGGGGAGGAGGGCGGGGATACTCACGCTGTCCACTGCGAGCGCTCCTCCTTGGCGTaGCGACGTAAGGACGTGCAG +
Preference number: 5 (lower is better)
Translates to: GSHHSGEEGGDTHAVHCERSSLA*RRKDVQ
Trigger: CTGCACGTCCTTACGTCGCAACGCCAAGGAGGAGCG...CTCGCAGTGGACAGCGTGAGTATCCCCGCCCTCCTCCCCAGAGTGATGTGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CAA 90 bp GCCGAGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACACCGACAGGAAGTACTaGTGGCCGTTGTCCTTCACG +
Preference number: 5 (lower is better)
Translates to: AEVASAWAAQGWRRGWCHTDRKY*WPLSFT
Trigger: CGTGAAGGACAACGGCCACAAGTACTTCCTGTCGGT...GTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCTCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR CAA 90 bp CGCAGCAGCCGACGCCCCGTGCCCCGGCGAGTGACAGCTTCACTATGTACAGCAACCCGGCAGTGCCTCTaGCCTGTATGTGAGGAACGT +
Preference number: 5 (lower is better)
Translates to: RSSRRPVPRRVTASLCTATRQCL*PVCEER
Trigger: ACGTTCCTCACATACAGGCAAGAGGCACTGCCGGGT...TGCTGTACATAGTGAAGCTGTCACTCGCCGGGGCACGGGGCGTCGGCTGCTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp TACCCTCCCGAGTTGCAGAGCTGTGAGGCTTCAGCCGGCCGCTGCTCCCGTGCATGCTACCCTCCCGAGTaGCAGAGCTGTGAGGCTTCA +
Preference number: 5 (lower is better)
Translates to: YPPELQSCEASAGRCSRACYPPE*QSCEAS
Trigger: TGAAGCCTCACAGCTCTGCAACTCGGGAGGGTAGCA...TGCACGGGAGCAGCGGCCGGCTGAAGCCTCACAGCTCTGCAACTCGGGAGGGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS TCA 90 bp CATCTCACGGTCTGTGTCCCAGATCCGGACGATCCGCACGTCTCCTaGGCTCATGAGGAGGCCGGTCTCCTGCTCCCAGTCCACCACCAT +
Preference number: 5 (lower is better)
Translates to: HLTVCVPDPDDPHVS*AHEEAGLLLPVHHH
Trigger: ATGGTGGTGGACTGGGAGCAGGAGACCGGCCTCCTCATGAGCTCAGGAGACGTGCGGATCGTCCGGATCTGGGACACAGACCGTGAGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000573163.1
ENST00000575542.5
CDS TCA 90 bp GTCGTAGACGCGGATGGAGCCGTCACCGAGGCCAGCCACGATGAGTaGGCGGTGGGAATCACAGGACAGACTCGTCACACAGCTGTCTGC +
Preference number: 5 (lower is better)
Translates to: VVDADGAVTEASHDE*AVGITGQTRHTAVC
Trigger: GCAGACAGCTGTGTGACGAGTCTGTCCTGTGATTCCCACCGCTCACTCATCGTGGCTGGCCTCGGTGACGGCTCCATCCGCGTCTACGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000573163.1
ENST00000575542.5
CDS GCA 90 bp ATGCTCTGCAGTGCAGCTGCCCCCAAGCGGACGCAGAGTGCTGTGTaGCCAGGAAGGGCAGAGCCAGGTAACTCCGTGCTCCTGTTTCGT +
Preference number: 5 (lower is better)
Translates to: MLCSAAAPKRTQSAV*PGRAEPGNSVLLFR
Trigger: ACGAAACAGGAGCACGGAGTTACCTGGCTCTGCCCTTCCTGGGCACACAGCACTCTGCGTCCGCTTGGGGGCAGCTGCACTGCAGAGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS-3UTR CAA 90 bp TCCAGACACGACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTGCCGTGGGGTGGGGGAGTCCTaGGCAGCAAGCGCTCGAGAA +
Preference number: 5 (lower is better)
Translates to: SRHDSEDRQKRVAGPSCRGVGES*AASARE
Trigger: TTCTCGAGCGCTTGCTGCCAAGGACTCCCCCACCCC...ACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTCGTGTCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp CCCGGCAGTGCCTCTTGCCTGTATGTGAGGAACGTGTGGGGACAGAGCAGGGAGGCTTGTACCGGGCCCTaGGCTGCCAGTTCTCGTACT +
Preference number: 5 (lower is better)
Translates to: PGSASCLYVRNVWGQSREACTGP*AASSRT
Trigger: AGTACGAGAACTGGCAGCCAAGGGCCCGGTACAAGC...CTCCCTGCTCTGTCCCCACACGTTCCTCACATACAGGCAAGAGGCACTGCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp GGTTCACATCACTCTGGGGAGGAGGGCGGGGATACTCACGCTGTCCACTGCGAGAGCCAGGTCCCAGGCTaGCCACATGGCGTGCATGTA +
Preference number: 5 (lower is better)
Translates to: GSHHSGEEGGDTHAVHCESQVPG*PHGVHV
Trigger: TACATGCACGCCATGTGGCAAGCCTGGGACCTGGCT...CTCGCAGTGGACAGCGTGAGTATCCCCGCCCTCCTCCCCAGAGTGATGTGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CAA 90 bp TTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGACTTCACGAGGTCCGCTaGGCACGAGCTGTCCACTGC +
Preference number: 5 (lower is better)
Translates to: FSAQTWGWDSCRNLLLVGLHEVR*ARAVHC
Trigger: GCAGTGGACAGCTCGTGCCAAGCGGACCTCGTGAAG...TCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS TCA 90 bp TGCGAGGGGAGCTGCCAAAAGCGTAAGAGACTTCAGGCCTCACGATaGCCCTGCTCTCGGCCTCCACCGCCTCAGCAGTTCCGAAGACAG +
Preference number: 5 (lower is better)
Translates to: CEGSCQKRKRLQASR*PCSRPPPPQQFRRQ
Trigger: CTGTCTTCGGAACTGCTGAGGCGGTGGAGGCCGAGAGCAGGGTCATCGTGAGGCCTGAAGTCTCTTACGCTTTTGGCAGCTCCCCTCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306801.8
ENST00000570891.5
ENST00000574767.5
ENST00000577161.5
ENST00000649732.1
CDS TCA 90 bp ACACGGCTGTTTCGCAGGAACCGCCACTCCCGCTCCTTGCGGATCTaGCTCTCCAGGTCGTGCTCTTCTGGGATCTTCATGACGGGCTGG +
Preference number: 5 (lower is better)
Translates to: TRLFRRNRHSRSLRI*LSRSCSSGIFMTGW
Trigger: CCAGCCCGTCATGAAGATCCCAGAAGAGCACGACCTGGAGAGTCAGATCCGCAAGGAGCGGGAGTGGCGGTTCCTGCGAAACAGCCGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000575542.5
CDS CCA 90 bp CGAGCTGTCCACTGCGAGGATCTTGGCCCAGATGAAAACGAGAAGTaGCCGCAGCTCTCGGGCCGAGCTCTGGAGCAGCTTCAGCACGTA +
Preference number: 5 (lower is better)
Translates to: RAVHCEDLGPDENEK*PQLSGRALEQLQHV
Trigger: TACGTGCTGAAGCTGCTCCAGAGCTCGGCCCGAGAGCTGCGGCCACTTCTCGTTTTCATCTGGGCCAAGATCCTCGCAGTGGACAGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000575542.5
ENST00000577161.5
CDS CCA 90 bp CTGATGGCACCATCGTCTGTGGCCGTCAGCAGAAGCGAGCAGTCCTaGCCGTTCAGATACTCCATGGCAGTGACCCTCGTGTACCGAGGG +
Preference number: 5 (lower is better)
Translates to: LMAPSSVAVSRSEQS*PFRYSMAVTLVYRG
Trigger: CCCTCGGTACACGAGGGTCACTGCCATGGAGTATCTGAACGGCCAGGACTGCTCGCTTCTGCTGACGGCCACAGACGATGGTGCCATCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000573837.1
ENST00000575542.5
CDS CCA 90 bp CTCGCTGTCCACTGCGAGGATCTTGGCCCAGATGAAAACGAGAAGTaGCCGCAGCTCTCGGGCCGAGCTCTGGAGCAGCTTCAGCACGTA +
Preference number: 5 (lower is better)
Translates to: LAVHCEDLGPDENEK*PQLSGRALEQLQHV
Trigger: TACGTGCTGAAGCTGCTCCAGAGCTCGGCCCGAGAGCTGCGGCCACTTCTCGTTTTCATCTGGGCCAAGATCCTCGCAGTGGACAGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544334.6
CDS CCA 90 bp TTCCATGACATCACAGTGCCACGGAGGGCGGGGGAGCACGGCACCTaGAGGATCCTGAAACACTCACCACATGGCGTGCATGTACGTGGG +
Preference number: 5 (lower is better)
Translates to: FHDITVPRRAGEHGT*RILKHSPHGVHVRG
Trigger: CCCACGTACATGCACGCCATGTGGTGAGTGTTTCAGGATCCTCCAGGTGCCGTGCTCCCCCGCCCTCCGTGGCACTGTGATGTCATGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CAA 90 bp CCGTGGTCGTGGGCCTCTCACCGCCAGAATGAAGCCACCTGGCTCCTTCACCTCGCCCAGAAGAGGCGATaGCAGCATTTCGGACTCCAT +
Preference number: 5 (lower is better)
Translates to: PWSWASHRQNEATWLLHLAQKRR*QHFGLH
Trigger: ATGGAGTCCGAAATGCTGCAATCGCCTCTTCTGGGC...GAGGTGAAGGAGCCAGGTGGCTTCATTCTGGCGGTGAGAGGCCCACGACCACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp CACAGGTCGGGCTGCTGTCCCCGCGCCTGTGGGGAAGAGCAGCCCTTCGGAGGGACTGCTTCTGTAAATTaGCACCGATGGTTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: HRSGCCPRACGEEQPFGGTASVN*HRWFPE
Trigger: CTCTGGAAACCATCGGTGCAAATTTACAGAAGCAGT...CCCTCCGAAGGGCTGCTCTTCCCCACAGGCGCGGGGACAGCAGCCCGACCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp CGCAGCAGCCGACGCCCCGTGCCCCGGCGAGTGACAGCTTCACTATGTACAGCAGACGTGCAGAGCTTCTaGACTTCATCCACAGTTGGG +
Preference number: 5 (lower is better)
Translates to: RSSRRPVPRRVTASLCTADVQSF*TSSTVG
Trigger: CCCAACTGTGGATGAAGTCAAGAAGCTCTGCACGTC...TGCTGTACATAGTGAAGCTGTCACTCGCCGGGGCACGGGGCGTCGGCTGCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp CCGTGGTCGTGGGCCTCTCACCGCCAGAATGAAGCCACCTGGCTCCTTCACCTCCTGTCTGAAGAGCTTTaGGAAGAGATCCCGGGGGAG +
Preference number: 5 (lower is better)
Translates to: PWSWASHRQNEATWLLHLLSEEL*EEIPGE
Trigger: CTCCCCCGGGATCTCTTCCAAAAGCTCTTCAGACAG...GAGGTGAAGGAGCCAGGTGGCTTCATTCTGGCGGTGAGAGGCCCACGACCACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp GCTCCGTGCAATTCCATGACATCACAGTGCCACGGAGGGCGGGGGAGCACGGCACTGTCTGAAGAGCTTTaGGAAGAGATCCCGGGGGAG +
Preference number: 5 (lower is better)
Translates to: APCNSMTSQCHGGRGSTALSEEL*EEIPGE
Trigger: CTCCCCCGGGATCTCTTCCAAAAGCTCTTCAGACAG...TGCCGTGCTCCCCCGCCCTCCGTGGCACTGTGATGTCATGGAATTGCACGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CAA 90 bp CAAAAAGGAGCAGCGGAGGGGCCGCCTCTGTCCTGCCTTGTCACGTCCCGGCCAAGGAAATGTCCCTGCTaGCGTGCACTGACTGTGAGA +
Preference number: 5 (lower is better)
Translates to: QKGAAEGPPLSCLVTSRPRKCPC*RALTVR
Trigger: TCTCACAGTCAGTGCACGCAAGCAGGGACATTTCCT...TGGCCGGGACGTGACAAGGCAGGACAGAGGCGGCCCCTCCGCTGCTCCTTTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp TTGTGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTCGCCTCTGTCCTGCCTaGTCACGTCCCGGCCAGCCC +
Preference number: 5 (lower is better)
Translates to: LWLCSVCKTAHTRPAAPPRLCPA*SRPGQP
Trigger: GGGCTGGCCGGGACGTGACAAGGCAGGACAGAGGCG...AGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp TTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGATGGAAGATTCTGGTGTaGCCGCCTGGCACGCCCTGT +
Preference number: 5 (lower is better)
Translates to: FSAQTWGWDSCRNLLLVGWKILV*PPGTPC
Trigger: ACAGGGCGTGCCAGGCGGCAACACCAGAATCTTCCA...TCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp CGCAGCAGCCGACGCCCCGTGCCCCGGCGAGTGACAGCTTCACTATGTACAGCAGGAGCCACCTGCCTTTaGACAGGTGGTGATTTTGTC +
Preference number: 5 (lower is better)
Translates to: RSSRRPVPRRVTASLCTAGATCL*TGGDFV
Trigger: GACAAAATCACCACCTGTCAAAAGGCAGGTGGCTCC...TGCTGTACATAGTGAAGCTGTCACTCGCCGGGGCACGGGGCGTCGGCTGCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS TCA 90 bp TTCTGTCGTAGACGCGGATGGAGCCGTCACCGAGGCCAGCCACGATaGGTGAGCGGTGGGAATCACAGGACAGACTCGTCACACAGCTGT +
Preference number: 5 (lower is better)
Translates to: FCRRRGWSRHRGQPR*VSGGNHRTDSSHSC
Trigger: ACAGCTGTGTGACGAGTCTGTCCTGTGATTCCCACCGCTCACTCATCGTGGCTGGCCTCGGTGACGGCTCCATCCGCGTCTACGACAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000573163.1
ENST00000575542.5
CDS GCA 90 bp CAGCACGGATGTTTCCATAGGAGCTCACAGAACGAAGTCTGGGGGTaGACGGGCTGTCTCGCACTGGGGTCAAACTCCCTCCCTCTGTGG +
Preference number: 5 (lower is better)
Translates to: QHGCFHRSSQNEVWG*TGCLALGSNSLPLW
Trigger: CCACAGAGGGAGGGAGTTTGACCCCAGTGCGAGACAGCCCGTGCACCCCCAGACTTCGTTCTGTGAGCTCCTATGGAAACATCCGTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000575542.5
ENST00000577161.5
CDS GCA 90 bp GGCTACTCCTCAGTGTCCAGGGTCAGAAGCCTTCCTCGAGGTCTCTaGTCTGGGCCCACACTGCTTCACCACCTGTGCCGAATGCTAGCT +
Preference number: 5 (lower is better)
Translates to: GYSSVSRVRSLPRGL*SGPTLLHHLCRMLA
Trigger: AGCTAGCATTCGGCACAGGTGGTGAAGCAGTGTGGGCCCAGAGCAGAGACCTCGAGGAAGGCTTCTGACCCTGGACACTGAGGAGTAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572733.1
CDS GCA 90 bp CTTGACAGAAGCCTCAAGAGTGTCCTCGGCCGACAGCACGGTGTCTaGTGCACAGCTGCACCATTCGCACGGCACCTCAAGGGAGAGGTA +
Preference number: 5 (lower is better)
Translates to: LDRSLKSVLGRQHGV*CTAAPFARHLKGEV
Trigger: TACCTCTCCCTTGAGGTGCCGTGCGAATGGTGCAGCTGTGCAGCAGACACCGTGCTGTCGGCCGAGGACACTCTTGAGGCTTCTGTCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649732.1
CDS CCA 90 bp CTGCTTGTACCGGGCCGATCCAGCATTCCAAGCGTGCACAGGGCGTaGTCTTCACCACATCGGGAGGGTCCACACCAACATTCAGGCACA +
Preference number: 5 (lower is better)
Translates to: LLVPGRSSIPSVHRA*SSPHREGPHQHSGT
Trigger: TGTGCCTGAATGTTGGTGTGGACCCTCCCGATGTGGTGAAGACCACGCCCTGTGCACGCTTGGAATGCTGGATCGGCCCGGTACAAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS CCA 90 bp CTCCTCAGTGTCCAGGGTCAGAAGCCTTCCTCGAGGTCTCTGCTCTaGGCCCACACTGCTTCACCACCTGTGCCGAATGCTAGCTGCGAA +
Preference number: 5 (lower is better)
Translates to: LLSVQGQKPSSRSLL*AHTASPPVPNASCE
Trigger: TTCGCAGCTAGCATTCGGCACAGGTGGTGAAGCAGTGTGGGCCCAGAGCAGAGACCTCGAGGAAGGCTTCTGACCCTGGACACTGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572733.1
CDS-3UTR CAA 90 bp AGCTCCGTGCAATTCCATGACATCACAGTGCCACGGAGGGCGGGGGAGCACGGCGACGTGCAGAGCTTCTaGACTTCATCCACAGTTGGG +
Preference number: 5 (lower is better)
Translates to: SSVQFHDITVPRRAGEHGDVQSF*TSSTVG
Trigger: CCCAACTGTGGATGAAGTCAAGAAGCTCTGCACGTC...GCCGTGCTCCCCCGCCCTCCGTGGCACTGTGATGTCATGGAATTGCACGGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CAA 90 bp CCGGCAGGTTCACATCACTCTGGGGAGGAGGGCGGGGATACTCACGCTGTCCACGACGTGCAGAGCTTCTaGACTTCATCCACAGTTGGG +
Preference number: 5 (lower is better)
Translates to: PAGSHHSGEEGGDTHAVHDVQSF*TSSTVG
Trigger: CCCAACTGTGGATGAAGTCAAGAAGCTCTGCACGTC...GTGGACAGCGTGAGTATCCCCGCCCTCCTCCCCAGAGTGATGTGAACCTGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CAA 90 bp TCCAGACACGACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTGCCGTAGGACTCGCTCCTCCTaGGCGTTGCGACGTAAGGAC +
Preference number: 5 (lower is better)
Translates to: SRHDSEDRQKRVAGPSCRRTRSS*ALRRKD
Trigger: GTCCTTACGTCGCAACGCCAAGGAGGAGCGAGTCCT...ACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTCGTGTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp TCCAGACACGACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTGCCGTAGCCAGGTCCCAGGCTaGCCACATGGCGTGCATGTA +
Preference number: 5 (lower is better)
Translates to: SRHDSEDRQKRVAGPSCRSQVPG*PHGVHV
Trigger: TACATGCACGCCATGTGGCAAGCCTGGGACCTGGCT...ACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTCGTGTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp GAGCAGCCCTTCGGAGGGAAAGGAGCCCCGTGGATTAAGGCAGGGGCTACCTCGTTCTGCAAAGATTTGTaGAGGCTCCTGGCTGTGGCG +
Preference number: 5 (lower is better)
Translates to: EQPFGGKGAPWIKAGATSFCKDL*RLLAVA
Trigger: CGCCACAGCCAGGAGCCTCAACAAATCTTTGCAGAA...CGAGGTAGCCCCTGCCTTAATCCACGGGGCTCCTTTCCCTCCGAAGGGCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp CCGTGGTCGTGGGCCTCTCACCGCCAGAATGAAGCCACCTGGCTCCTTCACCTCGCGGAGATGAAACTTTaGTGTCCAGCAGCATCGTCC +
Preference number: 5 (lower is better)
Translates to: PWSWASHRQNEATWLLHLAEMKL*CPAASS
Trigger: GGACGATGCTGCTGGACACAAAAGTTTCATCTCCGC...GAGGTGAAGGAGCCAGGTGGCTTCATTCTGGCGGTGAGAGGCCCACGACCACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp CCCCGGCGAGTGACAGCTTCACTATGTACAGCAGGCGGCCGTGGCCTGGTGGGCCCTTCTTCCTCTCTCTaGGTTTCCCGAATTTCCAGT +
Preference number: 5 (lower is better)
Translates to: PRRVTASLCTAGGRGLVGPSSSL*VSRISS
Trigger: ACTGGAAATTCGGGAAACCAAGAGAGAGGAAGAAGG...GCCCACCAGGCCACGGCCGCCTGCTGTACATAGTGAAGCTGTCACTCGCCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp AGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACCCGGTGGGTAAGAATTGAGTaGAAGGACTGGATGGGAAGC +
Preference number: 5 (lower is better)
Translates to: RSHQHGRLKAGDGAGVTRWVRIE*KDWMGS
Trigger: GCTTCCCATCCAGTCCTTCAACTCAATTCTTACCCA...CCGGGTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS TCA 90 bp CTCGCTCCTCCTTGGCGTTGCGACGTAAGGACGTGCAGAGCTTCTTaGCTTCATCCACAGTTGGGTCAAGGCTCTGCTTGTACCGGGCCC +
Preference number: 5 (lower is better)
Translates to: LAPPWRCDVRTCRAS*LHPQLGQGSACTGP
Trigger: GGGCCCGGTACAAGCAGAGCCTTGACCCAACTGTGGATGAAGTCAAGAAGCTCTGCACGTCCTTACGTCGCAACGCCAAGGAGGAGCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000570891.5
ENST00000577161.5
ENST00000649732.1
CDS TCA 90 bp CTCGCTCCTCCTTGGCGTTGCGACGTAAGGACGTGCAGAGCTTCTTaGCTTCATCCACAGTTGGGTCAAGGCTCTGCTTGTACCGGGCCG +
Preference number: 5 (lower is better)
Translates to: LAPPWRCDVRTCRAS*LHPQLGQGSACTGP
Trigger: CGGCCCGGTACAAGCAGAGCCTTGACCCAACTGTGGATGAAGTCAAGAAGCTCTGCACGTCCTTACGTCGCAACGCCAAGGAGGAGCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS GCA 90 bp GACAGAAGCCTCAAGAGTGTCCTCGGCCGACAGCACGGTGTCTGCTaGACAGCTGCACCATTCGCACGGCACCTCAAGGGAGAGGTATTT +
Preference number: 5 (lower is better)
Translates to: DRSLKSVLGRQHGVC*TAAPFARHLKGEVF
Trigger: AAATACCTCTCCCTTGAGGTGCCGTGCGAATGGTGCAGCTGTGCAGCAGACACCGTGCTGTCGGCCGAGGACACTCTTGAGGCTTCTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649732.1
CDS-3UTR CAA 90 bp TTGTGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGGGTCAAGGCTCTGCTaGTACCGGGCCCTTGGCTGC +
Preference number: 5 (lower is better)
Translates to: LWLCSVCKTAHTRPAAPPGSRLC*YRALGC
Trigger: GCAGCCAAGGGCCCGGTACAAGCAGAGCCTTGACCC...AGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp TTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGACTGTCTGAAGAGCTTTaGGAAGAGATCCCGGGGGAG +
Preference number: 5 (lower is better)
Translates to: FSAQTWGWDSCRNLLLVGLSEEL*EEIPGE
Trigger: CTCCCCCGGGATCTCTTCCAAAAGCTCTTCAGACAG...TCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp TCCAGACACGACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTGCCGTAGCATCATGGCCACGTaGTGGTCGATGGTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: SRHDSEDRQKRVAGPSCRSIMAT*WSMVVE
Trigger: CTCCACCACCATCGACCACAACGTGGCCATGATGCT...ACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTCGTGTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR CAA 90 bp TCCAGACACGACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTGCCGTGTCTGCTCTGGGCCCTaGTCGAACATCTTCCGTGTC +
Preference number: 5 (lower is better)
Translates to: SRHDSEDRQKRVAGPSCRVCSGP*SNIFRV
Trigger: GACACGGAAGATGTTCGACAAGGGCCCAGAGCAGAC...ACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTCGTGTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp ACCACAGGCCCAGCTGTCAGCCGAGGTCGCATCAGCATGGGCGGCTCAAGGCTGCCTTCTTCCTCTCTCTaGGTTTCCCGAATTTCCAGT +
Preference number: 5 (lower is better)
Translates to: TTGPAVSRGRISMGGSRLPSSSL*VSRISS
Trigger: ACTGGAAATTCGGGAAACCAAGAGAGAGGAAGAAGG...CAGCCTTGAGCCGCCCATGCTGATGCGACCTCGGCTGACAGCTGGGCCTGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp AGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACCCGGGTGGTTGTGTTCTGTTaGCAAAACTGCTCATACACG +
Preference number: 5 (lower is better)
Translates to: RSHQHGRLKAGDGAGVTRVVVFC*QNCSYT
Trigger: CGTGTATGAGCAGTTTTGCAAACAGAACACAACCAC...CCGGGTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp GCCGAGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACGTGGTTGTGTTCTGTTaGCAAAACTGCTCATACACG +
Preference number: 5 (lower is better)
Translates to: AEVASAWAAQGWRRGWCHVVVFC*QNCSYT
Trigger: CGTGTATGAGCAGTTTTGCAAACAGAACACAACCAC...GTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCTCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp AGACAGCCCACGTGCAGGCGGCACGCGGTGCCCATGGGGGTGGGCTCCAGGGTGATACCATCATTGTGGTaGTGTTCTGTTTGCAAAACT +
Preference number: 5 (lower is better)
Translates to: RQPTCRRHAVPMGVGSRVIPSLW*CSVCKT
Trigger: AGTTTTGCAAACAGAACACAACCACAATGATGGTAT...CACCCTGGAGCCCACCCCCATGGGCACCGCGTGCCGCCTGCACGTGGGCTGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS GCA 90 bp ACCATCCCAGCTCCTCGCGTCGTTGGCAGCATGTCCGAGAGCCCCTaGCACGCGGTCACCATCTCTGGGTTCTTTTCCAAATCAGCAAAA +
Preference number: 5 (lower is better)
Translates to: TIPAPRVVGSMSESP*HAVTISGFFSKSAK
Trigger: TTTTGCTGATTTGGAAAAGAACCCAGAGATGGTGACCGCGTGGCAGGGGCTCTCGGACATGCTGCCAACGACGCGAGGAGCTGGGATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000573163.1
ENST00000575542.5
CDS CCA 90 bp CCATCGACAGAGGATCGATCCAGCATTCCAAGCGTGCACAGGGCGTaGTCTTCACCACATCGGGAGGGTCCACACCAACATTCAGGCACA +
Preference number: 5 (lower is better)
Translates to: PSTEDRSSIPSVHRA*SSPHREGPHQHSGT
Trigger: TGTGCCTGAATGTTGGTGTGGACCCTCCCGATGTGGTGAAGACCACGCCCTGTGCACGCTTGGAATGCTGGATCGATCCTCTGTCGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000570891.5
ENST00000577161.5
ENST00000649732.1
CDS-3UTR CAA 90 bp TTGTGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTCGCTCCTCCTTGGCGTaGCGACGTAAGGACGTGCAG +
Preference number: 5 (lower is better)
Translates to: LWLCSVCKTAHTRPAAPPRSSLA*RRKDVQ
Trigger: CTGCACGTCCTTACGTCGCAACGCCAAGGAGGAGCG...AGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp ATCAAATCCAGTGTGACGCCAGGCACCAGACTGACACATTTCTGCATGCAAAACACCCAGACCTCCCCGTaGACTGTGGGCCGGGGCACC +
Preference number: 5 (lower is better)
Translates to: IKSSVTPGTRLTHFCMQNTQTSP*TVGRGT
Trigger: GGTGCCCCGGCCCACAGTCAACGGGGAGGTCTGGGT...GTTTTGCATGCAGAAATGTGTCAGTCTGGTGCCTGGCGTCACACTGGATTTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CAA 90 bp TGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGCCAGGTCCCAGGCTaGCCACATGGCGTGCATGTA +
Preference number: 5 (lower is better)
Translates to: WGWDSCRNLLLVGARIPKSQVPG*PHGVHV
Trigger: TACATGCACGCCATGTGGCAAGCCTGGGACCTGGCT...TTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp TGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAATGGAAGATTCTGGTGTaGCCGCCTGGCACGCCCTGT +
Preference number: 5 (lower is better)
Translates to: WGWDSCRNLLLVGARIPKWKILV*PPGTPC
Trigger: ACAGGGCGTGCCAGGCGGCAACACCAGAATCTTCCA...TTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS GCA 90 bp GAGAACGCCACCGCGCCACCAGATTCCTCTGTCAAACTCAGGTTCTaGAAAGATTTGTTGAGGCTCCTGGCTGTGGCGACAGCACGGATG +
Preference number: 5 (lower is better)
Translates to: ENATAPPDSSVKLRF*KDLLRLLAVATARM
Trigger: CATCCGTGCTGTCGCCACAGCCAGGAGCCTCAACAAATCTTTGCAGAACCTGAGTTTGACAGAGGAATCTGGTGGCGCGGTGGCGTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000575542.5
ENST00000577161.5
CDS GCA 90 bp CGCAGAGTGCTGTGTGCCCAGGAAGGGCAGAGCCAGGTAACTCCGTaGTCCTGTTTCGTTACATGGAAGCTGCCCAGAATGGTGAAACCA +
Preference number: 5 (lower is better)
Translates to: RRVLCAQEGQSQVTP*SCFVTWKLPRMVKP
Trigger: TGGTTTCACCATTCTGGGCAGCTTCCATGTAACGAAACAGGAGCACGGAGTTACCTGGCTCTGCCCTTCCTGGGCACACAGCACTCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS GCA 90 bp CCTCAAGAGTGTCCTCGGCCGACAGCACGGTGTCTGCTGCACAGCTaGACCATTCGCACGGCACCTCAAGGGAGAGGTATTTATCTACTA +
Preference number: 5 (lower is better)
Translates to: PQECPRPTARCLLHS*TIRTAPQGRGIYLL
Trigger: TAGTAGATAAATACCTCTCCCTTGAGGTGCCGTGCGAATGGTGCAGCTGTGCAGCAGACACCGTGCTGTCGGCCGAGGACACTCTTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649732.1
CDS CCA 90 bp GTAGGCGATGCTGTTGAGTACTTTCATGGCCACGTCCGAGACCTCTaGATAGGGGTCAGCAGCCAGGTGCAGCAGGACTCTCCAAATCTG +
Preference number: 5 (lower is better)
Translates to: VGDAVEYFHGHVRDL*IGVSSQVQQDSPNL
Trigger: CAGATTTGGAGAGTCCTGCTGCACCTGGCTGCTGACCCCTATCCAGAGGTCTCGGACGTGGCCATGAAAGTACTCAACAGCATCGCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000575542.5
ENST00000577161.5
CDS CCA 90 bp CAGGAAGGGCAGAGCCAGGTAACTCCGTGCTCCTGTTTCGTTACATaGAAGCTGCCCAGAATGGTGAAACCAGAACCAGGGGCGGAGAAC +
Preference number: 5 (lower is better)
Translates to: QEGQSQVTPCSCFVT*KLPRMVKPEPGAEN
Trigger: GTTCTCCGCCCCTGGTTCTGGTTTCACCATTCTGGGCAGCTTCCATGTAACGAAACAGGAGCACGGAGTTACCTGGCTCTGCCCTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS-3UTR CAA 90 bp CTTGACGATCAAGCCAGCATTGGAGCAGTCGTAGACGAAGATCGACGGGCTGCCTGGGTCATGGGAGCTTaGCCCTCTGGTTTGGAGCTA +
Preference number: 5 (lower is better)
Translates to: LDDQASIGAVVDEDRRAAWVMGA*PSGLEL
Trigger: TAGCTCCAAACCAGAGGGCAAAGCTCCCATGACCCA...GGCAGCCCGTCGATCTTCGTCTACGACTGCTCCAATGCTGGCTTGATCGTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CAA 90 bp GGGGAGCACGTTCCACGCGATGGTGTCTGTGATGGCTGTGAAGATCCAGTTCAGCTGTCTGAAGAGCTTTaGGAAGAGATCCCGGGGGAG +
Preference number: 5 (lower is better)
Translates to: GEHVPRDGVCDGCEDPVQLSEEL*EEIPGE
Trigger: CTCCCCCGGGATCTCTTCCAAAAGCTCTTCAGACAG...CTGAACTGGATCTTCACAGCCATCACAGACACCATCGCGTGGAACGTGCTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CAA 90 bp CCCCAGCTGGCTAGGAAATGTCCCTGCTTGCGTGCACTGACTGTGAGAGGTGGTTCCACTGCGAGGATCTaGGCCCAGATGAAAACGAGA +
Preference number: 5 (lower is better)
Translates to: PQLARKCPCLRALTVRGGSTARI*AQMKTR
Trigger: TCTCGTTTTCATCTGGGCCAAGATCCTCGCAGTGGA...ACCACCTCTCACAGTCAGTGCACGCAAGCAGGGACATTTCCTAGCCAGCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp TCCAGACACGACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTGCCGTTTCTGCAAAGATTTGTaGAGGCTCCTGGCTGTGGCG +
Preference number: 5 (lower is better)
Translates to: SRHDSEDRQKRVAGPSCRFCKDL*RLLAVA
Trigger: CGCCACAGCCAGGAGCCTCAACAAATCTTTGCAGAA...ACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTCGTGTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp TTCTCGGCCCAGACGTGGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAAGGTTCTGCAAAGATTaGTTGAGGCTCCTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: FSAQTWGWDSCRNLLLVGRFCKD*LRLLAV
Trigger: CACAGCCAGGAGCCTCAACAAATCTTTGCAGAACCT...TCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCCACGTCTGGGCCGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp GCCGAGGTCGCATCAGCATGGGCGGCTCAAGGCTGGAGACGGGGCTGGTGTCACCCTGTTCAGAAATATTaGGTCGTCCAATCTCGTAAT +
Preference number: 5 (lower is better)
Translates to: AEVASAWAAQGWRRGWCHPVQKY*VVQSRN
Trigger: ATTACGAGATTGGACGACCAAATATTTCTGAACAGG...GTGACACCAGCCCCGTCTCCAGCCTTGAGCCGCCCATGCTGATGCGACCTCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp ATTGTGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCCTTCACACCCGCCAGTaGGAGGGGCGTCTCCTTCTT +
Preference number: 5 (lower is better)
Translates to: IVVVFCLQNCSYTPCGPSLHTRQ*EGRLLL
Trigger: AAGAAGGAGACGCCCCTCCAACTGGCGGGTGTGAAG...GGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCACAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp TTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGGGCGGGGAGCCACCTGCCTTTaGACAGGTGGTGATTTTGTC +
Preference number: 5 (lower is better)
Translates to: LCSVCKTAHTRPAAPPGRGATCL*TGGDFV
Trigger: GACAAAATCACCACCTGTCAAAAGGCAGGTGGCTCC...CCGCCCAGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS GCA 90 bp CACAGAAAAGACAACACATTCAGAACAAATGCTCTGCAGTGCAGCTaGCCCCAAGCGGACGCAGAGTGCTGTGTGCCCAGGAAGGGCAGA +
Preference number: 5 (lower is better)
Translates to: HRKDNTFRTNALQCS*PQADAECCVPRKGR
Trigger: TCTGCCCTTCCTGGGCACACAGCACTCTGCGTCCGCTTGGGGGCAGCTGCACTGCAGAGCATTTGTTCTGAATGTGTTGTCTTTTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS-3UTR CAA 90 bp AAGGTTAGAAACTCTCTTGCAAAGTGCTACCCTCCCGAGTTGCAGAGCTGTGAGCGCTCCTCCTTGGCGTaGCGACGTAAGGACGTGCAG +
Preference number: 5 (lower is better)
Translates to: KVRNSLAKCYPPELQSCERSSLA*RRKDVQ
Trigger: CTGCACGTCCTTACGTCGCAACGCCAAGGAGGAGCG...CTCACAGCTCTGCAACTCGGGAGGGTAGCACTTTGCAAGAGAGTTTCTAACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CAA 90 bp AATAAAGTGAGGTGTTTCCCCTTTCAGCGTCTCAGAGAAACACAGAACAGGAGAACCCAGACCTCCCCGTaGACTGTGGGCCGGGGCACC +
Preference number: 5 (lower is better)
Translates to: NKVRCFPFQRLRETQNRRTQTSP*TVGRGT
Trigger: GGTGCCCCGGCCCACAGTCAACGGGGAGGTCTGGGT...TCTCCTGTTCTGTGTTTCTCTGAGACGCTGAAAGGGGAAACACCTCACTTTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp AGTCGTAGACGAAGATCGACGGGCTGCCCATCCACGTCTGCAGGTCATATATGGAAGGAGGACGCCATATaGCCAGGACCCAGAATGCAC +
Preference number: 5 (lower is better)
Translates to: SRRRRSTGCPSTSAGHIWKEDAI*PGPRMH
Trigger: GTGCATTCTGGGTCCTGGCAATATGGCGTCCTCCTT...CCATATATGACCTGCAGACGTGGATGGGCAGCCCGTCGATCTTCGTCTACGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS TCA 90 bp TCAGCAGAAGCGAGCAGTCCTGGCCGTTCAGATACTCCATGGCAGTaGCCCTCGTGTACCGAGGGTTCCCATTGTGGAAATAATCCAGCT +
Preference number: 5 (lower is better)
Translates to: SAEASSPGRSDTPWQ*PSCTEGSHCGNNPA
Trigger: AGCTGGATTATTTCCACAATGGGAACCCTCGGTACACGAGGGTCACTGCCATGGAGTATCTGAACGGCCAGGACTGCTCGCTTCTGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000573837.1
ENST00000575542.5
CDS CCA 90 bp TCTCTGCTTTCCATCGCATACACCAAACGTTCCTGGTTTTGGAGCTaGAGCCCTTCTACTGCTGTCTGGAGCCCGTTCTGCAAAGGACCC +
Preference number: 5 (lower is better)
Translates to: SLLSIAYTKRSWFWS*SPSTAVWSPFCKGP
Trigger: GGGTCCTTTGCAGAACGGGCTCCAGACAGCAGTAGAAGGGCTCCAGCTCCAAAACCAGGAACGTTTGGTGTATGCGATGGAAAGCAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573163.1
CDS-3UTR CAA 90 bp ACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCGCCTACTGCTTCTGTAAATTaGCACCGATGGTTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: TFFWWELAFQKGAAEGPPTASVN*HRWFPE
Trigger: CTCTGGAAACCATCGGTGCAAATTTACAGAAGCAGT...AGGCGGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp GAGTTGCAGAGCTGTGAGGCTTCAGCCGGCCGCTGCTCCCGTGCAGTCCTAAAAACTGCTTCTGTAAATTaGCACCGATGGTTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: ELQSCEASAGRCSRAVLKTASVN*HRWFPE
Trigger: CTCTGGAAACCATCGGTGCAAATTTACAGAAGCAGT...TTTTAGGACTGCACGGGAGCAGCGGCCGGCTGAAGCCTCACAGCTCTGCAACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CAA 90 bp AAGGTTAGAAACTCTCTTGCAAAGTGCTACCCTCCCGAGTTGCAGAGCTGTGAGGCTTGTACCGGGCCCTaGGCTGCCAGTTCTCGTACT +
Preference number: 5 (lower is better)
Translates to: KVRNSLAKCYPPELQSCEACTGP*AASSRT
Trigger: AGTACGAGAACTGGCAGCCAAGGGCCCGGTACAAGC...CTCACAGCTCTGCAACTCGGGAGGGTAGCACTTTGCAAGAGAGTTTCTAACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CAA 90 bp TCCAGACACGACAGCGAAGACAGACAAAAGCGAGTAGCAGGGCCCTCCTGCCGTTGGGTAAGAATTGAGTaGAAGGACTGGATGGGAAGC +
Preference number: 5 (lower is better)
Translates to: SRHDSEDRQKRVAGPSCRWVRIE*KDWMGS
Trigger: GCTTCCCATCCAGTCCTTCAACTCAATTCTTACCCA...ACGGCAGGAGGGCCCTGCTACTCGCTTTTGTCTGTCTTCGCTGTCGTGTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS TCA 90 bp CGCCACCAGATTCCTCTGTCAAACTCAGGTTCTGCAAAGATTTGTTaGGGCTCCTGGCTGTGGCGACAGCACGGATGTTTCCATAGGAGC +
Preference number: 5 (lower is better)
Translates to: RHQIPLSNSGSAKIC*GSWLWRQHGCFHRS
Trigger: GCTCCTATGGAAACATCCGTGCTGTCGCCACAGCCAGGAGCCTCAACAAATCTTTGCAGAACCTGAGTTTGACAGAGGAATCTGGTGGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000575542.5
ENST00000577161.5
CDS GCA 90 bp GATGTTCACAGAAAAGACAACACATTCAGAACAAATGCTCTGCAGTaGAGCTGCCCCCAAGCGGACGCAGAGTGCTGTGTGCCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: DVHRKDNTFRTNALQ*SCPQADAECCVPRK
Trigger: CTTCCTGGGCACACAGCACTCTGCGTCCGCTTGGGGGCAGCTGCACTGCAGAGCATTTGTTCTGAATGTGTTGTCTTTTCTGTGAACATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS-3UTR CAA 90 bp AGATCTCTGGGAGCCCTGCATTTAGCTTCACTTGTTAATGCTACACGGGGTCCCTGGGTCATGGGAGCTTaGCCCTCTGGTTTGGAGCTA +
Preference number: 5 (lower is better)
Translates to: RSLGALHLASLVNATRGPWVMGA*PSGLEL
Trigger: TAGCTCCAAACCAGAGGGCAAAGCTCCCATGACCCA...GGGACCCCGTGTAGCATTAACAAGTGAAGCTAAATGCAGGGCTCCCAGAGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CAA 90 bp GTTTCTAAAAGGTTAGAAACTCTCTTGCAAAGTGCTACCCTCCCGAGTTGCAGAGGGTCAAGGCTCTGCTaGTACCGGGCCCTTGGCTGC +
Preference number: 5 (lower is better)
Translates to: VSKRLETLLQSATLPSCRGSRLC*YRALGC
Trigger: GCAGCCAAGGGCCCGGTACAAGCAGAGCCTTGACCC...TCTGCAACTCGGGAGGGTAGCACTTTGCAAGAGAGTTTCTAACCTTTTAGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CAA 90 bp ATCAAATCCAGTGTGACGCCAGGCACCAGACTGACACATTTCTGCATGCAAAACAGGACTCGCTCCTCCTaGGCGTTGCGACGTAAGGAC +
Preference number: 5 (lower is better)
Translates to: IKSSVTPGTRLTHFCMQNRTRSS*ALRRKD
Trigger: GTCCTTACGTCGCAACGCCAAGGAGGAGCGAGTCCT...GTTTTGCATGCAGAAATGTGTCAGTCTGGTGCCTGGCGTCACACTGGATTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CAA 90 bp AAGGCAAAGAGAGTGTACCTATTTATGCAGCGTACTTGGATGTTCACAGAAAAGATGTGCACGCCCTTGTaGGTGGGGCTGGCGGGGGCC +
Preference number: 5 (lower is better)
Translates to: KAKRVYLFMQRTWMFTEKMCTPL*VGLAGA
Trigger: GGCCCCCGCCAGCCCCACCAACAAGGGCGTGCACAT...CTTTTCTGTGAACATCCAAGTACGCTGCATAAATAGGTACACTCTCTTTGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS-3UTR CAA 90 bp AATAAAGTGAGGTGTTTCCCCTTTCAGCGTCTCAGAGAAACACAGAACAGGAGACGGCTGACCGGCTGCTaGGCCACATCGTTGGTCAGG +
Preference number: 5 (lower is better)
Translates to: NKVRCFPFQRLRETQNRRRLTGC*ATSLVR
Trigger: CCTGACCAACGATGTGGCCAAGCAGCCGGTCAGCCG...TCTCCTGTTCTGTGTTTCTCTGAGACGCTGAAAGGGGAAACACCTCACTTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp TTGTGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGCGGAGATGAAACTTTaGTGTCCAGCAGCATCGTCC +
Preference number: 5 (lower is better)
Translates to: LWLCSVCKTAHTRPAAPPAEMKL*CPAASS
Trigger: GGACGATGCTGCTGGACACAAAAGTTTCATCTCCGC...AGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS TCA 90 bp GAGCTCTCAAAGAGTAGAACCCAAACCTCCACCTGGAATCCCGAATaGCACAAAAAGAAGGCGGGGACACTCATGTCTGTCACGTGGGCT +
Preference number: 5 (lower is better)
Translates to: ELSKSRTQTSTWNPE*HKKKAGTLMSVTWA
Trigger: AGCCCACGTGACAGACATGAGTGTCCCCGCCTTCTTTTTGTGTCATTCGGGATTCCAGGTGGAGGTTTGGGTTCTACTCTTTGAGAGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649732.1
CDS CCA 90 bp CCCTTGGCTGCCAGTTCTCGTACTGCTTCTGTAAATTTGCACCGATaGTTTCCAGAGCTTTCTGAGGACCCATCGACAGAGGATCGATCC +
Preference number: 5 (lower is better)
Translates to: PLAASSRTASVNLHR*FPELSEDPSTEDRS
Trigger: GGATCGATCCTCTGTCGATGGGTCCTCAGAAAGCTCTGGAAACCATCGGTGCAAATTTACAGAAGCAGTACGAGAACTGGCAGCCAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000570891.5
ENST00000577161.5
ENST00000649732.1
CDS CCA 90 bp ACCCTCTGTCCTAGCTGGTGCTTGAAGTGGCTCTTTACCCACACATaGTGTTGTAACAGCACGCACTGGTCATGTGGAAAGATGGGCTCA +
Preference number: 5 (lower is better)
Translates to: TLCPSWCLKWLFTHT*CCNSTHWSCGKMGS
Trigger: TGAGCCCATCTTTCCACATGACCAGTGCGTGCTGTTACAACACCATGTGTGGGTAAAGAGCCACTTCAAGCACCAGCTAGGACAGAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573746.1
CDS-3UTR CAA 90 bp GGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAATGTAGTGCGAACTGCTaGAAGGACTTGACGATCAAG +
Preference number: 5 (lower is better)
Translates to: GDGIRAGTFFWWELAFQKCSANC*KDLTIK
Trigger: CTTGATCGTCAAGTCCTTCAAGCAGTTCGCACTACA...TTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp TGTTGGTCACTCTCTGCTCTTAGCTTCACATTACCATTTCGTGTTTTGTCAAAGTGGATGTGCACGCCCTaGTTGGTGGGGCTGGCGGGG +
Preference number: 5 (lower is better)
Translates to: CWSLSALSFTLPFRVLSKWMCTP*LVGLAG
Trigger: CCCCGCCAGCCCCACCAACAAGGGCGTGCACATCCA...CTTTGACAAAACACGAAATGGTAATGTGAAGCTAAGAGCAGAGAGTGACCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp AGAGAGTGTACCTATTTATGCAGCGTACTTGGATGTTCACAGAAAAGACAACACTGGATGTGCACGCCCTaGTTGGTGGGGCTGGCGGGG +
Preference number: 5 (lower is better)
Translates to: RECTYLCSVLGCSQKRQHWMCTP*LVGLAG
Trigger: CCCCGCCAGCCCCACCAACAAGGGCGTGCACATCCA...GTGTTGTCTTTTCTGTGAACATCCAAGTACGCTGCATAAATAGGTACACTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS GCA 90 bp AGCGTACTTGGATGTTCACAGAAAAGACAACACATTCAGAACAAATaGTCTGCAGTGCAGCTGCCCCCAAGCGGACGCAGAGTGCTGTGT +
Preference number: 5 (lower is better)
Translates to: SVLGCSQKRQHIQNK*SAVQLPPSGRRVLC
Trigger: ACACAGCACTCTGCGTCCGCTTGGGGGCAGCTGCACTGCAGAGCATTTGTTCTGAATGTGTTGTCTTTTCTGTGAACATCCAAGTACGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS-3UTR CAA 90 bp AATAAAGTGAGGTGTTTCCCCTTTCAGCGTCTCAGAGAAACACAGAACAGGAGACTTCACACCCGCCAGTaGGAGGGGCGTCTCCTTCTT +
Preference number: 5 (lower is better)
Translates to: NKVRCFPFQRLRETQNRRLHTRQ*EGRLLL
Trigger: AAGAAGGAGACGCCCCTCCAACTGGCGGGTGTGAAG...TCTCCTGTTCTGTGTTTCTCTGAGACGCTGAAAGGGGAAACACCTCACTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp ACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAAGGAGCAGCGGAGGGGCCGCCTTTACCATTTCGTGTTTaGTCAAAGTCCGTCTCAATT +
Preference number: 5 (lower is better)
Translates to: TFFWWELAFQKGAAEGPPLPFRV*SKSVSI
Trigger: AATTGAGACGGACTTTGACAAAACACGAAATGGTAA...AGGCGGCCCCTCCGCTGCTCCTTTTTGGAATGCGAGCTCCCACCAGAAGAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS TCA 90 bp TCGTACTGCTTCTGTAAATTTGCACCGATGGTTTCCAGAGCTTTCTaGGGACCCATCGACAGAGGATCGATCCAGCATTCCAAGCGTGCA +
Preference number: 5 (lower is better)
Translates to: SYCFCKFAPMVSRAF*GPIDRGSIQHSKRA
Trigger: TGCACGCTTGGAATGCTGGATCGATCCTCTGTCGATGGGTCCTCAGAAAGCTCTGGAAACCATCGGTGCAAATTTACAGAAGCAGTACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000570891.5
ENST00000577161.5
ENST00000649732.1
CDS-3UTR CAA 90 bp AAAGAGAGTGTACCTATTTATGCAGCGTACTTGGATGTTCACAGAAAAGACAACCGGCTGACCGGCTGCTaGGCCACATCGTTGGTCAGG +
Preference number: 5 (lower is better)
Translates to: KESVPIYAAYLDVHRKDNRLTGC*ATSLVR
Trigger: CCTGACCAACGATGTGGCCAAGCAGCCGGTCAGCCG...GTTGTCTTTTCTGTGAACATCCAAGTACGCTGCATAAATAGGTACACTCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS-3UTR CAA 90 bp TTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGGGCGGTTCAAAATACCATCATaGTGGTTGTGTTCTGTTTGC +
Preference number: 5 (lower is better)
Translates to: LCSVCKTAHTRPAAPPGRFKIPS*WLCSVC
Trigger: GCAAACAGAACACAACCACAATGATGGTATTTTGAA...CCGCCCAGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS TCA 90 bp CTGTGGTTGCTGGAGAAGGCAAGGCGTAGTTCTTTTCCTCTTCTATaGACTGCAGGGCCACGGTGCAGAAATTGCTTTCATACTGAACCA +
Preference number: 5 (lower is better)
Translates to: LWLLEKARRSSFPLL*TAGPRCRNCFHTEP
Trigger: TGGTTCAGTATGAAAGCAATTTCTGCACCGTGGCCCTGCAGTTCATAGAAGAGGAAAAGAACTACGCCTTGCCTTCTCCAGCAACCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000575542.5
ENST00000577161.5
CDS TCA 90 bp CCAGTTTCCAGTATGACCTATCCTGGTACTAAGACGCCTCCGCAGTaGACAAAGGTAAGGAGAGGGTGTTCTTGGAAATCGCAAAGCAGT +
Preference number: 5 (lower is better)
Translates to: PVSSMTYPGTKTPPQ*TKVRRGCSWKSQSS
Trigger: ACTGCTTTGCGATTTCCAAGAACACCCTCTCCTTACCTTTGTTCACTGCGGAGGCGTCTTAGTACCAGGATAGGTCATACTGGAAACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649732.1
CDS-3UTR CAA 90 bp CAGGTCATATATGGACAGAGGGATGTACTGCGTGTAGTTCTTGTTGAAGACCCATCCACTGCGAGGATCTaGGCCCAGATGAAAACGAGA +
Preference number: 5 (lower is better)
Translates to: QVIYGQRDVLRVVLVEDPSTARI*AQMKTR
Trigger: TCTCGTTTTCATCTGGGCCAAGATCCTCGCAGTGGA...TGGGTCTTCAACAAGAACTACACGCAGTACATCCCTCTGTCCATATATGACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CAA 90 bp CTCAAAACAAACAGAAACGCGTGTTGGGTAAGAATTGAGTTGAAGGACTGGATGAAGCAGATGCTGTCCTaGTCGGCTACGGCGATGCAC +
Preference number: 5 (lower is better)
Translates to: LKTNRNACWVRIELKDWMKQMLS*SATAMH
Trigger: GTGCATCGCCGTAGCCGACAAGGACAGCATCTGCTT...CATCCAGTCCTTCAACTCAATTCTTACCCAACACGCGTTTCTGTTTGTTTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp TGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCTGGGTTACCATTTCGTGTTTaGTCAAAGTCCGTCTCAATT +
Preference number: 5 (lower is better)
Translates to: WLCSVCKTAHTRPAAPPGLPFRV*SKSVSI
Trigger: AATTGAGACGGACTTTGACAAAACACGAAATGGTAA...CCCAGGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS TCA 90 bp GAAACACACATATCCCACTGTGCGTTCTGCTGGGGATGTTGGGGCTaGAATGCGGCTTCTACCATCTTGGAATATCACACACATTTCTTC +
Preference number: 5 (lower is better)
Translates to: ETHISHCAFCWGCWG*NAASTILEYHTHFF
Trigger: GAAGAAATGTGTGTGATATTCCAAGATGGTAGAAGCCGCATTTCAGCCCCAACATCCCCAGCAGAACGCACAGTGGGATATGTGTGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649732.1
CDS-3UTR CAA 90 bp CCACGTCTGCAGGTCATATATGGACAGAGGGATGTACTGCGTGTAGTTCTTGTTTGTAGTGCGAACTGCTaGAAGGACTTGACGATCAAG +
Preference number: 5 (lower is better)
Translates to: PRLQVIYGQRDVLRVVLVCSANC*KDLTIK
Trigger: CTTGATCGTCAAGTCCTTCAAGCAGTTCGCACTACA...AACAAGAACTACACGCAGTACATCCCTCTGTCCATATATGACCTGCAGACGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS-3UTR CAA 90 bp ATTGTGGTTGTGTTCTGTTTGCAAAACTGCTCATACACGCCCTGCGGCCCCTCCCCTGTTCAGAAATATTaGGTCGTCCAATCTCGTAAT +
Preference number: 5 (lower is better)
Translates to: IVVVFCLQNCSYTPCGPSPVQKY*VVQSRN
Trigger: ATTACGAGATTGGACGACCAAATATTTCTGAACAGG...GGAGGGGCCGCAGGGCGTGTATGAGCAGTTTTGCAAACAGAACACAACCACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp GGGGATGGGATTCGTGCCGGAACCTTCTTCTGGTGGGAGCTCGCATTCCAAAAATTCAAAATACCATCATaGTGGTTGTGTTCTGTTTGC +
Preference number: 5 (lower is better)
Translates to: GDGIRAGTFFWWELAFQKFKIPS*WLCSVC
Trigger: GCAAACAGAACACAACCACAATGATGGTATTTTGAA...TTTTTGGAATGCGAGCTCCCACCAGAAGAAGGTTCCGGCACGAATCCCATCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS GCA 90 bp ACACATATCCCACTGTGCGTTCTGCTGGGGATGTTGGGGCTGAAATaGGGCTTCTACCATCTTGGAATATCACACACATTTCTTCAGTTA +
Preference number: 5 (lower is better)
Translates to: THIPLCVLLGMLGLK*GFYHLGISHTFLQL
Trigger: TAACTGAAGAAATGTGTGTGATATTCCAAGATGGTAGAAGCCGCATTTCAGCCCCAACATCCCCAGCAGAACGCACAGTGGGATATGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649732.1
CDS-3UTR CAA 90 bp TGTTGGTCACTCTCTGCTCTTAGCTTCACATTACCATTTCGTGTTTTGTCAAAGTGGGTCATGGGAGCTTaGCCCTCTGGTTTGGAGCTA +
Preference number: 5 (lower is better)
Translates to: CWSLSALSFTLPFRVLSKWVMGA*PSGLEL
Trigger: TAGCTCCAAACCAGAGGGCAAAGCTCCCATGACCCA...CTTTGACAAAACACGAAATGGTAATGTGAAGCTAAGAGCAGAGAGTGACCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306801.8
CDS-3UTR CAA 90 bp TTCTCACTACTGGTTTCTAAAAGGTTAGAAACTCTCTTGCAAAGTGCTACCCTCGCCCAGAAGAGGCGATaGCAGCATTTCGGACTCCAT +
Preference number: 5 (lower is better)
Translates to: FSLLVSKRLETLLQSATLAQKRR*QHFGLH
Trigger: ATGGAGTCCGAAATGCTGCAATCGCCTCTTCTGGGC...GAGGGTAGCACTTTGCAAGAGAGTTTCTAACCTTTTAGAAACCAGTAGTGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CAA 90 bp CTACTGGTTTCTAAAAGGTTAGAAACTCTCTTGCAAAGTGCTACCCTCCCGAGTAGGTTAGAAACTCTCTaGCAAAGTGCTACCCTCCCG +
Preference number: 5 (lower is better)
Translates to: LLVSKRLETLLQSATLPSRLETL*QSATLP
Trigger: CGGGAGGGTAGCACTTTGCAAGAGAGTTTCTAACCT...ACTCGGGAGGGTAGCACTTTGCAAGAGAGTTTCTAACCTTTTAGAAACCAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CAA 90 bp AAAGAGAGTGTACCTATTTATGCAGCGTACTTGGATGTTCACAGAAAAGACAACACCTGCTCTGGGCCCTaGTCGAACATCTTCCGTGTC +
Preference number: 5 (lower is better)
Translates to: KESVPIYAAYLDVHRKDNTCSGP*SNIFRV
Trigger: GACACGGAAGATGTTCGACAAGGGCCCAGAGCAGGT...GTTGTCTTTTCTGTGAACATCCAAGTACGCTGCATAAATAGGTACACTCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS CCA 90 bp AGTAGCTTTTTCATACTCTGTTACATTGAGACCCTCTGTCCTAGCTaGTGCTTGAAGTGGCTCTTTACCCACACATGGTGTTGTAACAGC +
Preference number: 5 (lower is better)
Translates to: SSFFILCYIETLCPS*CLKWLFTHTWCCNS
Trigger: GCTGTTACAACACCATGTGTGGGTAAAGAGCCACTTCAAGCACCAGCTAGGACAGAGGGTCTCAATGTAACAGAGTATGAAAAAGCTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573746.1
CDS-3UTR CAA 90 bp AATAAAGTGAGGTGTTTCCCCTTTCAGCGTCTCAGAGAAACACAGAACAGGAGATGTAGTGCGAACTGCTaGAAGGACTTGACGATCAAG +
Preference number: 5 (lower is better)
Translates to: NKVRCFPFQRLRETQNRRCSANC*KDLTIK
Trigger: CTTGATCGTCAAGTCCTTCAAGCAGTTCGCACTACA...TCTCCTGTTCTGTGTTTCTCTGAGACGCTGAAAGGGGAAACACCTCACTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp TGTTGGTCACTCTCTGCTCTTAGCTTCACATTACCATTTCGTGTTTTGTCAAAGATGCGCACATCTCCATaGACGCTCACACTCACGATG +
Preference number: 5 (lower is better)
Translates to: CWSLSALSFTLPFRVLSKMRTSP*TLTLTM
Trigger: CATCGTGAGTGTGAGCGTCAATGGAGATGTGCGCAT...CTTTGACAAAACACGAAATGGTAATGTGAAGCTAAGAGCAGAGAGTGACCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp TGTTGGTCACTCTCTGCTCTTAGCTTCACATTACCATTTCGTGTTTTGTCAAAGAGGTTCTGCAAAGATTaGTTGAGGCTCCTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: CWSLSALSFTLPFRVLSKRFCKD*LRLLAV
Trigger: CACAGCCAGGAGCCTCAACAAATCTTTGCAGAACCT...CTTTGACAAAACACGAAATGGTAATGTGAAGCTAAGAGCAGAGAGTGACCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp TTCTCACTACTGGTTTCTAAAAGGTTAGAAACTCTCTTGCAAAGTGCTACCCTCTGTAGTGCGAACTGCTaGAAGGACTTGACGATCAAG +
Preference number: 5 (lower is better)
Translates to: FSLLVSKRLETLLQSATLCSANC*KDLTIK
Trigger: CTTGATCGTCAAGTCCTTCAAGCAGTTCGCACTACA...GAGGGTAGCACTTTGCAAGAGAGTTTCTAACCTTTTAGAAACCAGTAGTGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS-3UTR CAA 90 bp AAGGCAAAGAGAGTGTACCTATTTATGCAGCGTACTTGGATGTTCACAGAAAAGATTTATGCAGCGTACTaGGATGTTCACAGAAAAGAC +
Preference number: 5 (lower is better)
Translates to: KAKRVYLFMQRTWMFTEKIYAAY*DVHRKD
Trigger: GTCTTTTCTGTGAACATCCAAGTACGCTGCATAAAT...CTTTTCTGTGAACATCCAAGTACGCTGCATAAATAGGTACACTCTCTTTGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS-3UTR CAA 90 bp TGTTGGTCACTCTCTGCTCTTAGCTTCACATTACCATTTCGTGTTTTGTCAAAGATACCATCATTGTGGTaGTGTTCTGTTTGCAAAACT +
Preference number: 5 (lower is better)
Translates to: CWSLSALSFTLPFRVLSKIPSLW*CSVCKT
Trigger: AGTTTTGCAAACAGAACACAACCACAATGATGGTAT...CTTTGACAAAACACGAAATGGTAATGTGAAGCTAAGAGCAGAGAGTGACCAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306801.8
ENST00000544334.6
CDS-3UTR CAA 90 bp AGAGCGATCTTGCATGTGCTTCATAAATTCAAGTCAGCAAGTTATTTTCTCACTTTCTCCAGAGCGATCTaGCATGTGCTTCATAAATTC +
Preference number: 5 (lower is better)
Translates to: RAILHVLHKFKSASYFLTFSRAI*HVLHKF
Trigger: GAATTTATGAAGCACATGCAAGATCGCTCTGGAGAA...AGTGAGAAAATAACTTGCTGACTTGAATTTATGAAGCACATGCAAGATCGCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS TCA 90 bp AAATCCAGCATCACATATGGAGCTGCACATGTATACGTAGTCTTTTaGAATAATTGTCAGTATTGTTTGATACACACCAAAACTCCACAA +
Preference number: 5 (lower is better)
Translates to: KSSITYGAAHVYVVF*NNCQYCLIHTKTPQ
Trigger: TTGTGGAGTTTTGGTGTGTATCAAACAATACTGACAATTATTTCAAAAGACTACGTATACATGTGCAGCTCCATATGTGATGCTGGATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573746.1
CDS CCA 72 bp ACCCGGTTCCTCAACCTCAGGTCCGCGCGGCCTGGCTaGTCCTGGCCTTCAGCCCCGAGGCTCTCTCCTGCC +
Preference number: 6 (lower is better)
Translates to: TRFLNLRSARPG*SWPSAPRLSPA
Trigger: GGCAGGAGAGAGCCTCGGGGCTGAAGGCCAGGACCAGCCAGGCCGCGCGGACCTGAGGTTGAGGAACCGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306801.8
ENST00000570891.5
ENST00000574767.5
ENST00000577161.5
ENST00000649732.1
CDS CAA 90 bp GTGGTGCCCGGCCGGCCAGAAGGCAAGTCTCGGCTGACCGGCTGCTaGGCCACATCGTTGGTCAGGCTGGAGCTGCTGGTGCTGGACGCC +
Preference number: 6 (lower is better)
Translates to: VVPGRPEGKSRLTGC*ATSLVRLELLVLDA
Trigger: GGCGTCCAGCACCAGCAGCTCCAGCCTGACCAACGATGTGGCCAAGCAGCCGGTCAGCCGAGACTTGCCTTCTGGCCGGCCGGGCACCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000575542.5
ENST00000576366.1
CDS TCA 72 bp CCAGCCACTCTCAGCCCTGCGGGTCCCGCACTCGTCTaGGCTGCTGCAACCAGAGCCACGACCGGCCCATCG +
Preference number: 6 (lower is better)
Translates to: PATLSPAGPALV*AAATRATTGPS
Trigger: CGATGGGCCGGTCGTGGCTCTGGTTGCAGCAGCTCAGACGAGTGCGGGACCCGCAGGGCTGAGAGTGGCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306801.8
ENST00000570891.5
ENST00000574767.5
ENST00000577161.5
ENST00000649732.1
CDS GCA 72 bp TGCAACCAGAGCCACGACCGGCCCATCGTGCTCGCCTaGACCCGGTTCCTCAACCTCAGGTCCGCGCGGCCT +
Preference number: 6 (lower is better)
Translates to: CNQSHDRPIVLA*TRFLNLRSARP
Trigger: AGGCCGCGCGGACCTGAGGTTGAGGAACCGGGTGCAGGCGAGCACGATGGGCCGGTCGTGGCTCTGGTTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306801.8
ENST00000570891.5
ENST00000574767.5
ENST00000577161.5
ENST00000649732.1
CDS GCA 72 bp TCTCAGCCCTGCGGGTCCCGCACTCGTCTGAGCTGCTaGAACCAGAGCCACGACCGGCCCATCGTGCTCGCC +
Preference number: 6 (lower is better)
Translates to: SQPCGSRTRLSC*NQSHDRPIVLA
Trigger: GGCGAGCACGATGGGCCGGTCGTGGCTCTGGTTGCAGCAGCTCAGACGAGTGCGGGACCCGCAGGGCTGAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306801.8
ENST00000570891.5
ENST00000574767.5
ENST00000577161.5
ENST00000649732.1
CDS CCA 72 bp AGACAGGCAGGCCGCTCTTGGTGCCGGTTCGCCCACTaGGCCGACTGGGCTGAGGTCTCCGGCCAAGGGATC +
Preference number: 6 (lower is better)
Translates to: RQAGRSWCRFAH*ADWAEVSGQGI
Trigger: GATCCCTTGGCCGGAGACCTCAGCCCAGTCGGCCCAGTGGGCGAACCGGCACCAAGAGCGGCCTGCCTGTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306801.8
ENST00000570891.5
ENST00000574767.5
ENST00000577161.5
ENST00000649732.1
CDS CCA 72 bp CCGCCTCAGCAGTTCCGAAGACAGGCAGGCCGCTCTTaGTGCCGGTTCGCCCACTGGGCCGACTGGGCTGAG +
Preference number: 6 (lower is better)
Translates to: PPQQFRRQAGRS*CRFAHWADWAE
Trigger: CTCAGCCCAGTCGGCCCAGTGGGCGAACCGGCACCAAGAGCGGCCTGCCTGTCTTCGGAACTGCTGAGGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306801.8
ENST00000570891.5
ENST00000574767.5
ENST00000577161.5
ENST00000649732.1
CDS TCA 72 bp CTCTTGGTGCCGGTTCGCCCACTGGGCCGACTGGGCTaGGGTCTCCGGCCAAGGGATCGGGTTCAAAGGGCC +
Preference number: 6 (lower is better)
Translates to: LLVPVRPLGRLG*GLRPRDRVQRA
Trigger: GGCCCTTTGAACCCGATCCCTTGGCCGGAGACCTCAGCCCAGTCGGCCCAGTGGGCGAACCGGCACCAAGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306801.8
ENST00000570891.5
ENST00000574767.5
ENST00000577161.5
ENST00000649732.1
CDS TCA 72 bp CTGTGGTGCCCGGCCGGCCAGAAGGCAAGTCTCGGCTaGCCGGCTGCTTGGCCACATCGTTGGTCAGGCTGG +
Preference number: 6 (lower is better)
Translates to: LWCPAGQKASLG*PAAWPHRWSGW
Trigger: CCAGCCTGACCAACGATGTGGCCAAGCAGCCGGTCAGCCGAGACTTGCCTTCTGGCCGGCCGGGCACCACAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000575542.5
ENST00000576366.1
CDS GCA 72 bp CACTCTCAGCCCTGCGGGTCCCGCACTCGTCTGAGCTaGTGCAACCAGAGCCACGACCGGCCCATCGTGCTC +
Preference number: 6 (lower is better)
Translates to: HSQPCGSRTRLS*CNQSHDRPIVL
Trigger: GAGCACGATGGGCCGGTCGTGGCTCTGGTTGCAGCAGCTCAGACGAGTGCGGGACCCGCAGGGCTGAGAGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306801.8
ENST00000570891.5
ENST00000574767.5
ENST00000577161.5
ENST00000649732.1
CDS GCA 72 bp CCTCAGCAGTTCCGAAGACAGGCAGGCCGCTCTTGGTaGCGGTTCGCCCACTGGGCCGACTGGGCTGAGGTC +
Preference number: 6 (lower is better)
Translates to: PQQFRRQAGRSW*RFAHWADWAEV
Trigger: GACCTCAGCCCAGTCGGCCCAGTGGGCGAACCGGCACCAAGAGCGGCCTGCCTGTCTTCGGAACTGCTGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306801.8
ENST00000570891.5
ENST00000574767.5
ENST00000577161.5
ENST00000649732.1
CDS GCA 72 bp CCCGGCCGGCCAGAAGGCAAGTCTCGGCTGACCGGCTaGTTGGCCACATCGTTGGTCAGGCTGGAGCTGCTG +
Preference number: 6 (lower is better)
Translates to: PGRPEGKSRLTG*LATSLVRLELL
Trigger: CAGCAGCTCCAGCCTGACCAACGATGTGGCCAAGCAGCCGGTCAGCCGAGACTTGCCTTCTGGCCGGCCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000575542.5
ENST00000576366.1
CDS CCA 72 bp GAGGTCTCCGGCCAAGGGATCGGGTTCAAAGGGCCCTaGGTCTCCTCCAGCCACTCTCAGCCCTGCGGGTCC +
Preference number: 6 (lower is better)
Translates to: EVSGQGIGFKGP*VSSSHSQPCGS
Trigger: GGACCCGCAGGGCTGAGAGTGGCTGGAGGAGACCCAGGGCCCTTTGAACCCGATCCCTTGGCCGGAGACCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306801.8
ENST00000570891.5
ENST00000574767.5
ENST00000577161.5
ENST00000649732.1
CDS CCA 72 bp GGCCGCTCTTGGTGCCGGTTCGCCCACTGGGCCGACTaGGCTGAGGTCTCCGGCCAAGGGATCGGGTTCAAA +
Preference number: 6 (lower is better)
Translates to: GRSWCRFAHWAD*AEVSGQGIGFK
Trigger: TTTGAACCCGATCCCTTGGCCGGAGACCTCAGCCCAGTCGGCCCAGTGGGCGAACCGGCACCAAGAGCGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306801.8
ENST00000570891.5
ENST00000574767.5
ENST00000577161.5
ENST00000649732.1
CDS GCA 72 bp CCGAGGCAGATGGCCACCCACTGGCGCAGCAAGGGGTaGGGGTCGTTGAGCTGCTCCAGGCAGATGGCAATG +
Preference number: 6 (lower is better)
Translates to: PRQMATHWRSKG*GSLSCSRQMAM
Trigger: CATTGCCATCTGCCTGGAGCAGCTCAACGACCCGCACCCCTTGCTGCGCCAGTGGGTGGCCATCTGCCTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000575542.5
ENST00000577161.5
CDS GCA 72 bp TCCCTCACGCCGCACCACCTCGCCGAGTCGAAGTTCTaGCAGATCCTGCCGAGGCAGATGGCCACCCACTGG +
Preference number: 6 (lower is better)
Translates to: SLTPHHLAESKF*QILPRQMATHW
Trigger: CCAGTGGGTGGCCATCTGCCTCGGCAGGATCTGGCAGAACTTCGACTCGGCGAGGTGGTGCGGCGTGAGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000575542.5
ENST00000577161.5
CDS GCA 72 bp AGTGGTCCGTCCTCTCTGCAGAGTTGCCCACGAACGTaGCAAGGGCGAAGACCGCTGCGCAGCGGACCTCGG +
Preference number: 6 (lower is better)
Translates to: SGPSSLQSCPRT*QGRRPLRSGPR
Trigger: CCGAGGTCCGCTGCGCAGCGGTCTTCGCCCTTGGCACGTTCGTGGGCAACTCTGCAGAGAGGACGGACCACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000575542.5
ENST00000577161.5
CDS GCA 72 bp CCTTCAGGCCTCCCTCGGTCCTTGTGGCTTCTTCTCTaGACGGCGGAACCTGCAAGAGCGCCCTGCCCCCTG +
Preference number: 6 (lower is better)
Translates to: PSGLPRSLWLLL*TAEPARAPCPL
Trigger: CAGGGGGCAGGGCGCTCTTGCAGGTTCCGCCGTGCAGAGAAGAAGCCACAAGGACCGAGGGAGGCCTGAAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575542.5
CDS GCA 72 bp CAGAGGGGTGCACGAGTGAGGACCAGCACCCGGGTCTaGAAAGGCAGAGAGTGGCCCACAGACCCAGGACGG +
Preference number: 6 (lower is better)
Translates to: QRGARVRTSTRV*KGREWPTDPGR
Trigger: CCGTCCTGGGTCTGTGGGCCACTCTCTGCCTTTGCAGACCCGGGTGCTGGTCCTCACTCGTGCACCCCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS CCA 72 bp TTCTGCCAGATCCTGCCGAGGCAGATGGCCACCCACTaGCGCAGCAAGGGGTGCGGGTCGTTGAGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: FCQILPRQMATH*RSKGCGSLSCS
Trigger: GGAGCAGCTCAACGACCCGCACCCCTTGCTGCGCCAGTGGGTGGCCATCTGCCTCGGCAGGATCTGGCAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000575542.5
ENST00000577161.5
CDS CCA 72 bp CCGAGTCGAAGTTCTGCCAGATCCTGCCGAGGCAGATaGCCACCCACTGGCGCAGCAAGGGGTGCGGGTCGT +
Preference number: 6 (lower is better)
Translates to: PSRSSARSCRGR*PPTGAARGAGR
Trigger: ACGACCCGCACCCCTTGCTGCGCCAGTGGGTGGCCATCTGCCTCGGCAGGATCTGGCAGAACTTCGACTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000575542.5
ENST00000577161.5
CDS CAA 72 bp GGCCGGCCAGAAGGCAAGTCTCGGCTGACCGGCTGCTaGGCCACATCGTTGGTCAGGCTGGAGCTGCTGGTG +
Preference number: 6 (lower is better)
Translates to: GRPEGKSRLTGC*ATSLVRLELLV
Trigger: CACCAGCAGCTCCAGCCTGACCAACGATGTGGCCAAGCAGCCGGTCAGCCGAGACTTGCCTTCTGGCCGGCC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000575542.5
ENST00000576366.1
CDS CAA 72 bp ACCAGGCAGCCGGGCTCCCGTACCTGCTCTGGGCCCTaGTCGAACATCTTCCGTGTCCGGGGGAACTGGTGG +
Preference number: 6 (lower is better)
Translates to: TRQPGSRTCSGP*SNIFRVRGNWW
Trigger: CCACCAGTTCCCCCGGACACGGAAGATGTTCGACAAGGGCCCAGAGCAGGTACGGGAGCCCGGCTGCCTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS CAA 72 bp TCCTGGGACCAGGTGAATGCCTGGGGCCCACATGGGTaGGGGTCCCTGCGGGAGAGCCCAGTTGAGTGGGTC +
Preference number: 6 (lower is better)
Translates to: SWDQVNAWGPHG*GSLRESPVEWV
Trigger: GACCCACTCAACTGGGCTCTCCCGCAGGGACCCCAACCCATGTGGGCCCCAGGCATTCACCTGGTCCCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649732.1
CDS TCA 72 bp CACGGAGGGCGGGGGAGCACGGCACCTGGAGGATCCTaGAACACTCACCACATGGCGTGCATGTACGTGGGC +
Preference number: 6 (lower is better)
Translates to: HGGRGSTAPGGS*NTHHMACMYVG
Trigger: GCCCACGTACATGCACGCCATGTGGTGAGTGTTTCAGGATCCTCCAGGTGCCGTGCTCCCCCGCCCTCCGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS GCA 72 bp CGATGGTGGTGGAGTGGTCCGTCCTCTCTGCAGAGTTaGCCACGAACGTGCCAAGGGCGAAGACCGCTGCGC +
Preference number: 6 (lower is better)
Translates to: RWWWSGPSSLQS*PRTCQGRRPLR
Trigger: GCGCAGCGGTCTTCGCCCTTGGCACGTTCGTGGGCAACTCTGCAGAGAGGACGGACCACTCCACCACCATCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000575542.5
ENST00000577161.5
CDS GCA 72 bp TCGGTCCTTGTGGCTTCTTCTCTGCACGGCGGAACCTaGAAGAGCGCCCTGCCCCCTGCCAGATGGGTGCCT +
Preference number: 6 (lower is better)
Translates to: SVLVASSLHGGT*KSALPPARWVP
Trigger: AGGCACCCATCTGGCAGGGGGCAGGGCGCTCTTGCAGGTTCCGCCGTGCAGAGAAGAAGCCACAAGGACCGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575542.5
CDS GCA 72 bp AGTGCAGCTGCCCCCAAGCGGACGCAGAGTGCTGTGTaGCCAGGAAGGGCAGAGCCAGGTAACTCCGTGCTC +
Preference number: 6 (lower is better)
Translates to: SAAAPKRTQSAV*PGRAEPGNSVL
Trigger: GAGCACGGAGTTACCTGGCTCTGCCCTTCCTGGGCACACAGCACTCTGCGTCCGCTTGGGGGCAGCTGCACT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS GCA 72 bp TCATGTCTGTCACGTGGGCTCCTGGGACCAGGTGAATaGCTGGGGCCCACATGGGTTGGGGTCCCTGCGGGA +
Preference number: 6 (lower is better)
Translates to: SCLSRGLLGPGE*LGPTWVGVPAG
Trigger: TCCCGCAGGGACCCCAACCCATGTGGGCCCCAGGCATTCACCTGGTCCCAGGAGCCCACGTGACAGACATGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649732.1
CDS CCA 72 bp TCCTTCCGGACCATGGGGCTCCCGTCGCTGACCAGCTaGGCCAGCATCATGGCCACGTTGTGGTCGATGGTG +
Preference number: 6 (lower is better)
Translates to: SFRTMGLPSLTS*ASIMATLWSMV
Trigger: CACCATCGACCACAACGTGGCCATGATGCTGGCCCAGCTGGTCAGCGACGGGAGCCCCATGGTCCGGAAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000575542.5
ENST00000577161.5
CDS CCA 72 bp CAGCTTCACTATGTACAGCAGGCGGCCGTGGCCTGGTaGGCCCGGGTCACGCCGCTATCTGACACGCTTCTC +
Preference number: 6 (lower is better)
Translates to: QLHYVQQAAVAW*ARVTPLSDTLL
Trigger: GAGAAGCGTGTCAGATAGCGGCGTGACCCGGGCCCACCAGGCCACGGCCGCCTGCTGTACATAGTGAAGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000575542.5
CDS CCA 72 bp GCGAGTGACAGCTTCACTATGTACAGCAGGCGGCCGTaGCCTGGTGGGCCCGGGTCACGCCGCTATCTGACA +
Preference number: 6 (lower is better)
Translates to: ASDSFTMYSRRP*PGGPGSRRYLT
Trigger: TGTCAGATAGCGGCGTGACCCGGGCCCACCAGGCCACGGCCGCCTGCTGTACATAGTGAAGCTGTCACTCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000575542.5
CDS CCA 72 bp GCACGGCACCTGGAGGATCCTGAAACACTCACCACATaGCGTGCATGTACGTGGGCGGCAGACGCGGGCTGC +
Preference number: 6 (lower is better)
Translates to: ARHLEDPETLTT*RACTWAADAGC
Trigger: GCAGCCCGCGTCTGCCGCCCACGTACATGCACGCCATGTGGTGAGTGTTTCAGGATCCTCCAGGTGCCGTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS CAA 90 bp ACGTTGTGGTCGATGGTGGTGGAGTGGTCCGTCCTCTCTGCAGAGTaGCCCACGAACGTGCCAAGGGCGAAGACCGCTGCGCAGCGGACC +
Preference number: 6 (lower is better)
Translates to: TLWSMVVEWSVLSAE*PTNVPRAKTAAQRT
Trigger: GGTCCGCTGCGCAGCGGTCTTCGCCCTTGGCACGTTCGTGGGCAACTCTGCAGAGAGGACGGACCACTCCACCACCATCGACCACAACGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000575542.5
ENST00000577161.5
CDS TCA 72 bp CAGCCCCGAGGCTCTCTCCTGCCTGAGAACGAGTCCTaGGAAACGGGCGACACGGAACCACGGAGGAAAGGG +
Preference number: 6 (lower is better)
Translates to: QPRGSLLPENES*ETGDTEPRRKG
Trigger: CCCTTTCCTCCGTGGTTCCGTGTCGCCCGTTTCTCAGGACTCGTTCTCAGGCAGGAGAGAGCCTCGGGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306801.8
ENST00000570891.5
ENST00000574767.5
ENST00000577161.5
ENST00000649732.1
CDS TCA 72 bp GTCTGTGTCCCAGATCCGGACGATCCGCACGTCTCCTaGGCTCATGAGGAGGCCGGTCTCCTGCTCCCAGTC +
Preference number: 6 (lower is better)
Translates to: VCVPDPDDPHVS*AHEEAGLLLPV
Trigger: GACTGGGAGCAGGAGACCGGCCTCCTCATGAGCTCAGGAGACGTGCGGATCGTCCGGATCTGGGACACAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000573163.1
ENST00000575542.5
CDS GCA 72 bp GCCCACACTGCTTCACCACCTGTGCCGAATGCTAGCTaGGAACCCGGGACGGTAGGCGGGAACCGAGAGTTC +
Preference number: 6 (lower is better)
Translates to: AHTASPPVPNAS*EPGTVGGNREF
Trigger: GAACTCTCGGTTCCCGCCTACCGTCCCGGGTTCGCAGCTAGCATTCGGCACAGGTGGTGAAGCAGTGTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572733.1
CDS CAA 72 bp GGGTCCGCCAGGACCGACAGGAAGTACTTGTGGCCGTaGTCCTTCACGAGGTCCGCTTGGCACGAGCTGTCC +
Preference number: 6 (lower is better)
Translates to: GSARTDRKYLWP*SFTRSAWHELS
Trigger: GGACAGCTCGTGCCAAGCGGACCTCGTGAAGGACAACGGCCACAAGTACTTCCTGTCGGTCCTGGCGGACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000575542.5
ENST00000577161.5
CDS CAA 72 bp ATGGCCACCCACTGGCGCAGCAAGGGGTGCGGGTCGTaGAGCTGCTCCAGGCAGATGGCAATGAGGTTTCCC +
Preference number: 6 (lower is better)
Translates to: MATHWRSKGCGS*SCSRQMAMRFP
Trigger: GGGAAACCTCATTGCCATCTGCCTGGAGCAGCTCAACGACCCGCACCCCTTGCTGCGCCAGTGGGTGGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000575542.5
ENST00000577161.5
CDS CAA 72 bp CCGTCGCTGACCAGCTGGGCCAGCATCATGGCCACGTaGTGGTCGATGGTGGTGGAGTGGTCCGTCCTCTCT +
Preference number: 6 (lower is better)
Translates to: PSLTSWASIMAT*WSMVVEWSVLS
Trigger: AGAGAGGACGGACCACTCCACCACCATCGACCACAACGTGGCCATGATGCTGGCCCAGCTGGTCAGCGACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000575542.5
ENST00000577161.5
CDS CAA 90 bp ATGGGGCTCCCGTCGCTGACCAGCTGGGCCAGCATCATGGCCACGTaGTGGTCGATGGTGGTGGAGTGGTCCGTCCTCTCTGCAGAGTTG +
Preference number: 6 (lower is better)
Translates to: MGLPSLTSWASIMAT*WSMVVEWSVLSAEL
Trigger: CAACTCTGCAGAGAGGACGGACCACTCCACCACCATCGACCACAACGTGGCCATGATGCTGGCCCAGCTGGTCAGCGACGGGAGCCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000575542.5
ENST00000577161.5
CDS CAA 90 bp CTCCAGTCGCAGAACCCCGTCTGCACCGTGGCGGAGATGAAACTTTaGTGTCCAGCAGCATCGTCCGCGTCGTCCGCAGTCTGCTCTGGG +
Preference number: 6 (lower is better)
Translates to: LQSQNPVCTVAEMKL*CPAASSASSAVCSG
Trigger: CCCAGAGCAGACTGCGGACGACGCGGACGATGCTGCTGGACACAAAAGTTTCATCTCCGCCACGGTGCAGACGGGGTTCTGCGACTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000575542.5
CDS TCA 72 bp AGATGCTGTCCTTGTCGGCTACGGCGATGCACGGCGTaGAGGGGTGGAATTTCACCACAGAGGGGACGCCGG +
Preference number: 6 (lower is better)
Translates to: RCCPCRLRRCTA*RGGISPQRGRR
Trigger: CCGGCGTCCCCTCTGTGGTGAAATTCCACCCCTTCACGCCGTGCATCGCCGTAGCCGACAAGGACAGCATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000573837.1
ENST00000575542.5
CDS TCA 72 bp AGACGCGGATGGAGCCGTCACCGAGGCCAGCCACGATaGGTGAGCGGTGGGAATCACAGGACAGACTCGTCA +
Preference number: 6 (lower is better)
Translates to: RRGWSRHRGQPR*VSGGNHRTDSS
Trigger: TGACGAGTCTGTCCTGTGATTCCCACCGCTCACTCATCGTGGCTGGCCTCGGTGACGGCTCCATCCGCGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000573163.1
ENST00000575542.5
CDS GCA 72 bp CACGGCTGTTTCGCAGGAACCGCCACTCCCGCTCCTTaGGGATCTGACTCTCCAGGTCGTGCTCTTCTGGGA +
Preference number: 6 (lower is better)
Translates to: HGCFAGTATPAP*GSDSPGRALLG
Trigger: TCCCAGAAGAGCACGACCTGGAGAGTCAGATCCGCAAGGAGCGGGAGTGGCGGTTCCTGCGAAACAGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000575542.5
CDS GCA 72 bp CTCTGCTTGTACCGGGCCGATCCAGCATTCCAAGCGTaGACAGGGCGTGGTCTTCACCACATCGGGAGGGTC +
Preference number: 6 (lower is better)
Translates to: LCLYRADPAFQA*TGRGLHHIGRV
Trigger: GACCCTCCCGATGTGGTGAAGACCACGCCCTGTGCACGCTTGGAATGCTGGATCGGCCCGGTACAAGCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS GCA 72 bp CTCAAGAGTGTCCTCGGCCGACAGCACGGTGTCTGCTaGACAGCTGCACCATTCGCACGGCACCTCAAGGGA +
Preference number: 6 (lower is better)
Translates to: LKSVLGRQHGVC*TAAPFARHLKG
Trigger: TCCCTTGAGGTGCCGTGCGAATGGTGCAGCTGTGCAGCAGACACCGTGCTGTCGGCCGAGGACACTCTTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649732.1
CDS GCA 72 bp AGCCTCAAGAGTGTCCTCGGCCGACAGCACGGTGTCTaGTGCACAGCTGCACCATTCGCACGGCACCTCAAG +
Preference number: 6 (lower is better)
Translates to: SLKSVLGRQHGV*CTAAPFARHLK
Trigger: CTTGAGGTGCCGTGCGAATGGTGCAGCTGTGCAGCAGACACCGTGCTGTCGGCCGAGGACACTCTTGAGGCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649732.1
CDS CCA 72 bp GGGCCAGCATCATGGCCACGTTGTGGTCGATGGTGGTaGAGTGGTCCGTCCTCTCTGCAGAGTTGCCCACGA +
Preference number: 6 (lower is better)
Translates to: GPASWPRCGRWW*SGPSSLQSCPR
Trigger: TCGTGGGCAACTCTGCAGAGAGGACGGACCACTCCACCACCATCGACCACAACGTGGCCATGATGCTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000575542.5
ENST00000577161.5
CDS CCA 72 bp GCTGGGCCAGCATCATGGCCACGTTGTGGTCGATGGTaGTGGAGTGGTCCGTCCTCTCTGCAGAGTTGCCCA +
Preference number: 6 (lower is better)
Translates to: AGPASWPRCGRW*WSGPSSLQSCP
Trigger: TGGGCAACTCTGCAGAGAGGACGGACCACTCCACCACCATCGACCACAACGTGGCCATGATGCTGGCCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000575542.5
ENST00000577161.5
CDS CCA 72 bp CCAGCTGGGCCAGCATCATGGCCACGTTGTGGTCGATaGTGGTGGAGTGGTCCGTCCTCTCTGCAGAGTTGC +
Preference number: 6 (lower is better)
Translates to: PAGPASWPRCGR*WWSGPSSLQSC
Trigger: GCAACTCTGCAGAGAGGACGGACCACTCCACCACCATCGACCACAACGTGGCCATGATGCTGGCCCAGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000575542.5
ENST00000577161.5
CDS CCA 72 bp TCGCTGACCAGCTGGGCCAGCATCATGGCCACGTTGTaGTCGATGGTGGTGGAGTGGTCCGTCCTCTCTGCA +
Preference number: 6 (lower is better)
Translates to: SLTSWASIMATL*SMVVEWSVLSA
Trigger: TGCAGAGAGGACGGACCACTCCACCACCATCGACCACAACGTGGCCATGATGCTGGCCCAGCTGGTCAGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000575542.5
ENST00000577161.5
CDS CCA 72 bp CCGGGCCGATCCAGCATTCCAAGCGTGCACAGGGCGTaGTCTTCACCACATCGGGAGGGTCCACACCAACAT +
Preference number: 6 (lower is better)
Translates to: PGRSSIPSVHRA*SSPHREGPHQH
Trigger: ATGTTGGTGTGGACCCTCCCGATGTGGTGAAGACCACGCCCTGTGCACGCTTGGAATGCTGGATCGGCCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS CCA 72 bp ATCACAGTGCCACGGAGGGCGGGGGAGCACGGCACCTaGAGGATCCTGAAACACTCACCACATGGCGTGCAT +
Preference number: 6 (lower is better)
Translates to: ITVPRRAGEHGT*RILKHSPHGVH
Trigger: ATGCACGCCATGTGGTGAGTGTTTCAGGATCCTCCAGGTGCCGTGCTCCCCCGCCCTCCGTGGCACTGTGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570891.5
CDS GCA 72 bp GTTGTGGTCGATGGTGGTGGAGTGGTCCGTCCTCTCTaGAGAGTTGCCCACGAACGTGCCAAGGGCGAAGAC +
Preference number: 6 (lower is better)
Translates to: VVVDGGGVVRPL*RVAHERAKGED
Trigger: GTCTTCGCCCTTGGCACGTTCGTGGGCAACTCTGCAGAGAGGACGGACCACTCCACCACCATCGACCACAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000575542.5
ENST00000577161.5
CDS GCA 72 bp CGGCGCATCTTGTCGATGGTCTCGAAGGACAGGATATaGTCCTCATTCTCGGGGCTGCCCAGGGTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: RRILSMVSKDRI*SSFSGLPRVLL
Trigger: CAGCAGCACCCTGGGCAGCCCCGAGAATGAGGAGCATATCCTGTCCTTCGAGACCATCGACAAGATGCGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000575542.5
ENST00000577161.5
CDS GCA 72 bp GCTCCTCGCGTCGTTGGCAGCATGTCCGAGAGCCCCTaGCACGCGGTCACCATCTCTGGGTTCTTTTCCAAA +
Preference number: 6 (lower is better)
Translates to: APRVVGSMSESP*HAVTISGFFSK
Trigger: TTTGGAAAAGAACCCAGAGATGGTGACCGCGTGGCAGGGGCTCTCGGACATGCTGCCAACGACGCGAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000573163.1
ENST00000575542.5
CDS GCA 72 bp GGAAAGATGGGCTCACCGAGCTGTGCAGAGCTCTTCTaGAGCATCAAACACACCCAGCATGGCCGCCGCGGT +
Preference number: 6 (lower is better)
Translates to: GKMGSPSCAELF*SIKHTQHGRRG
Trigger: ACCGCGGCGGCCATGCTGGGTGTGTTTGATGCTGCAGAAGAGCTCTGCACAGCTCGGTGAGCCCATCTTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573746.1
CDS GCA 72 bp TCAGTGTCCAGGGTCAGAAGCCTTCCTCGAGGTCTCTaGTCTGGGCCCACACTGCTTCACCACCTGTGCCGA +
Preference number: 6 (lower is better)
Translates to: SVSRVRSLPRGL*SGPTLLHHLCR
Trigger: TCGGCACAGGTGGTGAAGCAGTGTGGGCCCAGAGCAGAGACCTCGAGGAAGGCTTCTGACCCTGGACACTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572733.1
CDS GCA 72 bp TGTCCTCGGCCGACAGCACGGTGTCTGCTGCACAGCTaGACCATTCGCACGGCACCTCAAGGGAGAGGTATT +
Preference number: 6 (lower is better)
Translates to: CPRPTARCLLHS*TIRTAPQGRGI
Trigger: AATACCTCTCCCTTGAGGTGCCGTGCGAATGGTGCAGCTGTGCAGCAGACACCGTGCTGTCGGCCGAGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649732.1
CDS CCA 72 bp AGAACGAAGTCTGGGGGTGCACGGGCTGTCTCGCACTaGGGTCAAACTCCCTCCCTCTGTGGTTGCTGGAGA +
Preference number: 6 (lower is better)
Translates to: RTKSGGARAVSH*GQTPSLCGCWR
Trigger: TCTCCAGCAACCACAGAGGGAGGGAGTTTGACCCCAGTGCGAGACAGCCCGTGCACCCCCAGACTTCGTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000575542.5
ENST00000577161.5
CDS CCA 72 bp CCATCGTCTGTGGCCGTCAGCAGAAGCGAGCAGTCCTaGCCGTTCAGATACTCCATGGCAGTGACCCTCGTG +
Preference number: 6 (lower is better)
Translates to: PSSVAVSRSEQS*PFRYSMAVTLV
Trigger: CACGAGGGTCACTGCCATGGAGTATCTGAACGGCCAGGACTGCTCGCTTCTGCTGACGGCCACAGACGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000573837.1
ENST00000575542.5
CDS CCA 72 bp ATGCGCACATCTCCATTGACGCTCACACTCACGATGTaGCCGTCGGGACGCTTCTGCAGGGAGGCCTTCACC +
Preference number: 6 (lower is better)
Translates to: MRTSPLTLTLTM*PSGRFCREAFT
Trigger: GGTGAAGGCCTCCCTGCAGAAGCGTCCCGACGGCCACATCGTGAGTGTGAGCGTCAATGGAGATGTGCGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000575542.5
CDS CCA 72 bp GTCCAGGGTCAGAAGCCTTCCTCGAGGTCTCTGCTCTaGGCCCACACTGCTTCACCACCTGTGCCGAATGCT +
Preference number: 6 (lower is better)
Translates to: VQGQKPSSRSLL*AHTASPPVPNA
Trigger: AGCATTCGGCACAGGTGGTGAAGCAGTGTGGGCCCAGAGCAGAGACCTCGAGGAAGGCTTCTGACCCTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572733.1
CDS CAA 72 bp CAGAACCCCGTCTGCACCGTGGCGGAGATGAAACTTTaGTGTCCAGCAGCATCGTCCGCGTCGTCCGCAGTC +
Preference number: 6 (lower is better)
Translates to: QNPVCTVAEMKL*CPAASSASSAV
Trigger: GACTGCGGACGACGCGGACGATGCTGCTGGACACAAAAGTTTCATCTCCGCCACGGTGCAGACGGGGTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000575542.5
CDS TCA 72 bp TCCAGTCGCAGAACCCCGTCTGCACCGTGGCGGAGATaGAACTTTTGTGTCCAGCAGCATCGTCCGCGTCGT +
Preference number: 6 (lower is better)
Translates to: SSRRTPSAPWRR*NFCVQQHRPRR
Trigger: ACGACGCGGACGATGCTGCTGGACACAAAAGTTTCATCTCCGCCACGGTGCAGACGGGGTTCTGCGACTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000575542.5
CDS TCA 72 bp GGGTGGATGTCCAGGGCCGTCAGCCCCTTCACGATCTaGAGCACATTTACCGACTCAGGCATCCGGGGATCA +
Preference number: 6 (lower is better)
Translates to: GWMSRAVSPFTI*STFTDSGIRGS
Trigger: TGATCCCCGGATGCCTGAGTCGGTAAATGTGCTTCAGATCGTGAAGGGGCTGACGGCCCTGGACATCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000575542.5
CDS GCA 72 bp ACCCATCGACAGAGGATCGATCCAGCATTCCAAGCGTaGACAGGGCGTGGTCTTCACCACATCGGGAGGGTC +
Preference number: 6 (lower is better)
Translates to: THRQRIDPAFQA*TGRGLHHIGRV
Trigger: GACCCTCCCGATGTGGTGAAGACCACGCCCTGTGCACGCTTGGAATGCTGGATCGATCCTCTGTCGATGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000570891.5
ENST00000577161.5
ENST00000649732.1
CDS CCA 72 bp GGGAGGAGTAGGAGCTGGCGCGGCGCATCTTGTCGATaGTCTCGAAGGACAGGATATGCTCCTCATTCTCGG +
Preference number: 6 (lower is better)
Translates to: GRSRSWRGASCR*SRRTGYAPHSR
Trigger: CCGAGAATGAGGAGCATATCCTGTCCTTCGAGACCATCGACAAGATGCGCCGCGCCAGCTCCTACTCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000575542.5
ENST00000577161.5
CDS CAA 72 bp AGGTCCGCTTGGCACGAGCTGTCCACTGCGAGGATCTaGGCCCAGATGAAAACGAGAAGTGGCCGCAGCTCT +
Preference number: 6 (lower is better)
Translates to: RSAWHELSTARI*AQMKTRSGRSS
Trigger: AGAGCTGCGGCCACTTCTCGTTTTCATCTGGGCCAAGATCCTCGCAGTGGACAGCTCGTGCCAAGCGGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000575542.5
ENST00000577161.5
CDS CAA 90 bp ACTCGCTCCTCCTTGGCGTTGCGACGTAAGGACGTGCAGAGCTTCTaGACTTCATCCACAGTTGGGTCAAGGCTCTGCTTGTACCGGGCC +
Preference number: 6 (lower is better)
Translates to: TRSSLALRRKDVQSF*TSSTVGSRLCLYRA
Trigger: GGCCCGGTACAAGCAGAGCCTTGACCCAACTGTGGATGAAGTCAAGAAGCTCTGCACGTCCTTACGTCGCAACGCCAAGGAGGAGCGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000570891.5
ENST00000574767.5
ENST00000577161.5
ENST00000649732.1
CDS CAA 90 bp AGCTCCCCGTGTCCGCCCAGGGCTGTGGGTGAGAAGGCAGGAGACTaGTCTAGAGTGTTAGGCCATCTTGACAGAAGCCTCAAGAGTGTC +
Preference number: 6 (lower is better)
Translates to: SSPCPPRAVGEKAGD*SRVLGHLDRSLKSV
Trigger: GACACTCTTGAGGCTTCTGTCAAGATGGCCTAACACTCTAGACAAGTCTCCTGCCTTCTCACCCACAGCCCTGGGCGGACACGGGGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649732.1
CDS TCA 72 bp TTTCGCAGGAACCGCCACTCCCGCTCCTTGCGGATCTaGCTCTCCAGGTCGTGCTCTTCTGGGATCTTCATG +
Preference number: 6 (lower is better)
Translates to: FRRNRHSRSLRI*LSRSCSSGIFM
Trigger: CATGAAGATCCCAGAAGAGCACGACCTGGAGAGTCAGATCCGCAAGGAGCGGGAGTGGCGGTTCCTGCGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000575542.5
CDS GCA 72 bp TGTTTCCATAGGAGCTCACAGAACGAAGTCTGGGGGTaGACGGGCTGTCTCGCACTGGGGTCAAACTCCCTC +
Preference number: 6 (lower is better)
Translates to: CFHRSSQNEVWG*TGCLALGSNSL
Trigger: GAGGGAGTTTGACCCCAGTGCGAGACAGCCCGTGCACCCCCAGACTTCGTTCTGTGAGCTCCTATGGAAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000575542.5
ENST00000577161.5
CDS GCA 72 bp GTGGGAATCACAGGACAGACTCGTCACACAGCTGTCTaGGCCCGTAGGGATGTCCTGCACCTTCATCTCACG +
Preference number: 6 (lower is better)
Translates to: VGITGQTRHTAV*ARRDVLHLHLT
Trigger: CGTGAGATGAAGGTGCAGGACATCCCTACGGGCGCAGACAGCTGTGTGACGAGTCTGTCCTGTGATTCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000573163.1
ENST00000575542.5
CDS GCA 72 bp CAAACGTTCCTGGTTTTGGAGCTGGAGCCCTTCTACTaGTGTCTGGAGCCCGTTCTGCAAAGGACCCTGGCC +
Preference number: 6 (lower is better)
Translates to: QTFLVLELEPFY*CLEPVLQRTLA
Trigger: GGCCAGGGTCCTTTGCAGAACGGGCTCCAGACAGCAGTAGAAGGGCTCCAGCTCCAAAACCAGGAACGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573163.1
CDS GCA 72 bp GACAACACATTCAGAACAAATGCTCTGCAGTGCAGCTaGCCCCAAGCGGACGCAGAGTGCTGTGTGCCCAGG +
Preference number: 6 (lower is better)
Translates to: DNTFRTNALQCS*PQADAECCVPR
Trigger: CCTGGGCACACAGCACTCTGCGTCCGCTTGGGGGCAGCTGCACTGCAGAGCATTTGTTCTGAATGTGTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS CCA 72 bp ACGGGCGACACGGAACCACGGAGGAAAGGGACAATGTaGGCTTATTGGGTCATGGGAGCTTTGCCCTCTGGT +
Preference number: 6 (lower is better)
Translates to: TGDTEPRRKGTM*AYWVMGALPSG
Trigger: ACCAGAGGGCAAAGCTCCCATGACCCAATAAGCCCACATTGTCCCTTTCCTCCGTGGTTCCGTGTCGCCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306801.8
ENST00000570891.5
ENST00000574767.5
ENST00000577161.5
ENST00000649732.1
CDS CCA 72 bp GAGGATCGATCCAGCATTCCAAGCGTGCACAGGGCGTaGTCTTCACCACATCGGGAGGGTCCACACCAACAT +
Preference number: 6 (lower is better)
Translates to: EDRSSIPSVHRA*SSPHREGPHQH
Trigger: ATGTTGGTGTGGACCCTCCCGATGTGGTGAAGACCACGCCCTGTGCACGCTTGGAATGCTGGATCGATCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000570891.5
ENST00000577161.5
ENST00000649732.1
CDS TCA 72 bp GCGAGCAGTCCTGGCCGTTCAGATACTCCATGGCAGTaGCCCTCGTGTACCGAGGGTTCCCATTGTGGAAAT +
Preference number: 6 (lower is better)
Translates to: ASSPGRSDTPWQ*PSCTEGSHCGN
Trigger: ATTTCCACAATGGGAACCCTCGGTACACGAGGGTCACTGCCATGGAGTATCTGAACGGCCAGGACTGCTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000573837.1
ENST00000575542.5
CDS TCA 72 bp GCTCCTGTTTCGTTACATGGAAGCTGCCCAGAATGGTaGAACCAGAACCAGGGGCGGAGAACCGGGACACAC +
Preference number: 6 (lower is better)
Translates to: APVSLHGSCPEW*NQNQGRRTGTH
Trigger: GTGTGTCCCGGTTCTCCGCCCCTGGTTCTGGTTTCACCATTCTGGGCAGCTTCCATGTAACGAAACAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS GCA 72 bp CTGTGTGCCCAGGAAGGGCAGAGCCAGGTAACTCCGTaGTCCTGTTTCGTTACATGGAAGCTGCCCAGAATG +
Preference number: 6 (lower is better)
Translates to: LCAQEGQSQVTP*SCFVTWKLPRM
Trigger: CATTCTGGGCAGCTTCCATGTAACGAAACAGGAGCACGGAGTTACCTGGCTCTGCCCTTCCTGGGCACACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS GCA 72 bp AGCTTCTTGACTTCATCCACAGTTGGGTCAAGGCTCTaGTTGTACCGGGCCCTTGGCTGCCAGTTCTCGTAC +
Preference number: 6 (lower is better)
Translates to: SFLTSSTVGSRL*LYRALGCQFSY
Trigger: GTACGAGAACTGGCAGCCAAGGGCCCGGTACAAGCAGAGCCTTGACCCAACTGTGGATGAAGTCAAGAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000570891.5
ENST00000577161.5
ENST00000649732.1
CDS GCA 72 bp AGCTTCTTGACTTCATCCACAGTTGGGTCAAGGCTCTaGTTGTACCGGGCCGATCCAGCATTCCAAGCGTGC +
Preference number: 6 (lower is better)
Translates to: SFLTSSTVGSRL*LYRADPAFQAC
Trigger: GCACGCTTGGAATGCTGGATCGGCCCGGTACAAGCAGAGCCTTGACCCAACTGTGGATGAAGTCAAGAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574767.5
CDS CCA 72 bp TCCATCGCATACACCAAACGTTCCTGGTTTTGGAGCTaGAGCCCTTCTACTGCTGTCTGGAGCCCGTTCTGC +
Preference number: 6 (lower is better)
Translates to: SIAYTKRSWFWS*SPSTAVWSPFC
Trigger: GCAGAACGGGCTCCAGACAGCAGTAGAAGGGCTCCAGCTCCAAAACCAGGAACGTTTGGTGTATGCGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573163.1
CDS CAA 72 bp TTGGTCGTCCAATCTCGTAATGCCCTTCTGAATGACTaGCTGGGCCTGCCTCCTGACACGGCTGTTTCGCAG +
Preference number: 6 (lower is better)
Translates to: LVVQSRNALLND*LGLPPDTAVSQ
Trigger: CTGCGAAACAGCCGTGTCAGGAGGCAGGCCCAGCAAGTCATTCAGAAGGGCATTACGAGATTGGACGACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000575542.5
CDS TCA 72 bp CCTTGGCGTTGCGACGTAAGGACGTGCAGAGCTTCTTaGCTTCATCCACAGTTGGGTCAAGGCTCTGCTTGT +
Preference number: 6 (lower is better)
Translates to: PWRCDVRTCRAS*LHPQLGQGSAC
Trigger: ACAAGCAGAGCCTTGACCCAACTGTGGATGAAGTCAAGAAGCTCTGCACGTCCTTACGTCGCAACGCCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000570891.5
ENST00000574767.5
ENST00000577161.5
ENST00000649732.1
CDS GCA 72 bp ACCGCGCCACCAGATTCCTCTGTCAAACTCAGGTTCTaGAAAGATTTGTTGAGGCTCCTGGCTGTGGCGACA +
Preference number: 6 (lower is better)
Translates to: TAPPDSSVKLRF*KDLLRLLAVAT
Trigger: TGTCGCCACAGCCAGGAGCCTCAACAAATCTTTGCAGAACCTGAGTTTGACAGAGGAATCTGGTGGCGCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000575542.5
ENST00000577161.5
CDS CCA 72 bp ACGGAACCACGGAGGAAAGGGACAATGTGGGCTTATTaGGTCATGGGAGCTTTGCCCTCTGGTTTGGAGCTA +
Preference number: 6 (lower is better)
Translates to: TEPRRKGTMWAY*VMGALPSGLEL
Trigger: TAGCTCCAAACCAGAGGGCAAAGCTCCCATGACCCAATAAGCCCACATTGTCCCTTTCCTCCGTGGTTCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306801.8
ENST00000570891.5
ENST00000574767.5
ENST00000577161.5
ENST00000649732.1
CDS CCA 72 bp CGCTCTCTGCTTTCCATCGCATACACCAAACGTTCCTaGTTTTGGAGCTGGAGCCCTTCTACTGCTGTCTGG +
Preference number: 6 (lower is better)
Translates to: RSLLSIAYTKRS*FWSWSPSTAVW
Trigger: CCAGACAGCAGTAGAAGGGCTCCAGCTCCAAAACCAGGAACGTTTGGTGTATGCGATGGAAAGCAGAGAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573163.1
CDS CAA 72 bp TCCTTGGCGTTGCGACGTAAGGACGTGCAGAGCTTCTaGACTTCATCCACAGTTGGGTCAAGGCTCTGCTTG +
Preference number: 6 (lower is better)
Translates to: SLALRRKDVQSF*TSSTVGSRLCL
Trigger: CAAGCAGAGCCTTGACCCAACTGTGGATGAAGTCAAGAAGCTCTGCACGTCCTTACGTCGCAACGCCAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000570891.5
ENST00000574767.5
ENST00000577161.5
ENST00000649732.1
CDS CAA 90 bp TGTACCGGGCCCTTGGCTGCCAGTTCTCGTACTGCTTCTGTAAATTaGCACCGATGGTTTCCAGAGCTTTCTGAGGACCCATCGACAGAG +
Preference number: 6 (lower is better)
Translates to: CTGPLAASSRTASVN*HRWFPELSEDPSTE
Trigger: CTCTGTCGATGGGTCCTCAGAAAGCTCTGGAAACCATCGGTGCAAATTTACAGAAGCAGTACGAGAACTGGCAGCCAAGGGCCCGGTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000570891.5
ENST00000577161.5
ENST00000649732.1
CDS CCA 72 bp GATGTACTGCGTGTAGTTCTTTCTAACTTCCGAGGCTaGCTACTCCTCAGTGTCCAGGGTCAGAAGCCTTCC +
Preference number: 6 (lower is better)
Translates to: DVLRVVLSNFRG*LLLSVQGQKPS
Trigger: GGAAGGCTTCTGACCCTGGACACTGAGGAGTAGCCAGCCTCGGAAGTTAGAAAGAACTACACGCAGTACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572733.1
CDS CAA 90 bp GAATTTCACCACAGAGGGGACGCCGGGGTTCCTGTTCAGAAATATTaGGTCGTCCAATCTCGTAATGCCCTTCTGAATGACTTGCTGGGC +
Preference number: 6 (lower is better)
Translates to: EFHHRGDAGVPVQKY*VVQSRNALLNDLLG
Trigger: GCCCAGCAAGTCATTCAGAAGGGCATTACGAGATTGGACGACCAAATATTTCTGAACAGGAACCCCGGCGTCCCCTCTGTGGTGAAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000575542.5
CDS CAA 90 bp GAGGCAGGAAACACACATATCCCACTGTGCGTTCTGCTGGGGATGTaGGGGCTGAAATGCGGCTTCTACCATCTTGGAATATCACACACA +
Preference number: 6 (lower is better)
Translates to: EAGNTHIPLCVLLGM*GLKCGFYHLGISHT
Trigger: TGTGTGTGATATTCCAAGATGGTAGAAGCCGCATTTCAGCCCCAACATCCCCAGCAGAACGCACAGTGGGATATGTGTGTTTCCTGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649732.1
CDS CCA 72 bp CCTAGCTGGTGCTTGAAGTGGCTCTTTACCCACACATaGTGTTGTAACAGCACGCACTGGTCATGTGGAAAG +
Preference number: 6 (lower is better)
Translates to: PSWCLKWLFTHT*CCNSTHWSCGK
Trigger: CTTTCCACATGACCAGTGCGTGCTGTTACAACACCATGTGTGGGTAAAGAGCCACTTCAAGCACCAGCTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573746.1
CDS CAA 72 bp CCCTTGGCTGCCAGTTCTCGTACTGCTTCTGTAAATTaGCACCGATGGTTTCCAGAGCTTTCTGAGGACCCA +
Preference number: 6 (lower is better)
Translates to: PLAASSRTASVN*HRWFPELSEDP
Trigger: TGGGTCCTCAGAAAGCTCTGGAAACCATCGGTGCAAATTTACAGAAGCAGTACGAGAACTGGCAGCCAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000570891.5
ENST00000577161.5
ENST00000649732.1
CDS CAA 72 bp CACAGAGGGGACGCCGGGGTTCCTGTTCAGAAATATTaGGTCGTCCAATCTCGTAATGCCCTTCTGAATGAC +
Preference number: 6 (lower is better)
Translates to: HRGDAGVPVQKY*VVQSRNALLND
Trigger: GTCATTCAGAAGGGCATTACGAGATTGGACGACCAAATATTTCTGAACAGGAACCCCGGCGTCCCCTCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000575542.5
CDS TCA 72 bp ATTCCTCTGTCAAACTCAGGTTCTGCAAAGATTTGTTaGGGCTCCTGGCTGTGGCGACAGCACGGATGTTTC +
Preference number: 6 (lower is better)
Translates to: IPLSNSGSAKIC*GSWLWRQHGCF
Trigger: GAAACATCCGTGCTGTCGCCACAGCCAGGAGCCTCAACAAATCTTTGCAGAACCTGAGTTTGACAGAGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000575542.5
ENST00000577161.5
CDS TCA 72 bp AAGAGTAGAACCCAAACCTCCACCTGGAATCCCGAATaGCACAAAAAGAAGGCGGGGACACTCATGTCTGTC +
Preference number: 6 (lower is better)
Translates to: KSRTQTSTWNPE*HKKKAGTLMSV
Trigger: GACAGACATGAGTGTCCCCGCCTTCTTTTTGTGTCATTCGGGATTCCAGGTGGAGGTTTGGGTTCTACTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649732.1
CDS TCA 72 bp GGTAAGGAGAGGGTGTTCTTGGAAATCGCAAAGCAGTaGGCTGCCCACGAACAGATCAGAAGGAAGAAGGAT +
Preference number: 6 (lower is better)
Translates to: GKERVFLEIAKQ*AAHEQIRRKKD
Trigger: ATCCTTCTTCCTTCTGATCTGTTCGTGGGCAGCTCACTGCTTTGCGATTTCCAAGAACACCCTCTCCTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649732.1
CDS TCA 72 bp ATATCCCACTGTGCGTTCTGCTGGGGATGTTGGGGCTaGAATGCGGCTTCTACCATCTTGGAATATCACACA +
Preference number: 6 (lower is better)
Translates to: ISHCAFCWGCWG*NAASTILEYHT
Trigger: TGTGTGATATTCCAAGATGGTAGAAGCCGCATTTCAGCCCCAACATCCCCAGCAGAACGCACAGTGGGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649732.1
CDS CCA 72 bp GCCAGTTCTCGTACTGCTTCTGTAAATTTGCACCGATaGTTTCCAGAGCTTTCTGAGGACCCATCGACAGAG +
Preference number: 6 (lower is better)
Translates to: ASSRTASVNLHR*FPELSEDPSTE
Trigger: CTCTGTCGATGGGTCCTCAGAAAGCTCTGGAAACCATCGGTGCAAATTTACAGAAGCAGTACGAGAACTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000570891.5
ENST00000577161.5
ENST00000649732.1
CDS CCA 72 bp TACATTGAGACCCTCTGTCCTAGCTGGTGCTTGAAGTaGCTCTTTACCCACACATGGTGTTGTAACAGCACG +
Preference number: 6 (lower is better)
Translates to: YIETLCPSWCLK*LFTHTWCCNST
Trigger: CGTGCTGTTACAACACCATGTGTGGGTAAAGAGCCACTTCAAGCACCAGCTAGGACAGAGGGTCTCAATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573746.1
CDS CAA 72 bp GATTCCTCTGTCAAACTCAGGTTCTGCAAAGATTTGTaGAGGCTCCTGGCTGTGGCGACAGCACGGATGTTT +
Preference number: 6 (lower is better)
Translates to: DSSVKLRFCKDL*RLLAVATARMF
Trigger: AAACATCCGTGCTGTCGCCACAGCCAGGAGCCTCAACAAATCTTTGCAGAACCTGAGTTTGACAGAGGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000575542.5
ENST00000577161.5
CDS TCA 72 bp CCACACCAACATTCAGGCACAAAACTAAGGCAACACTaGCTGTCTTCATCCGATCCTTCATCCTCCAGCTCT +
Preference number: 6 (lower is better)
Translates to: PHQHSGTKLRQH*LSSSDPSSSSS
Trigger: AGAGCTGGAGGATGAAGGATCGGATGAAGACAGTCAGTGTTGCCTTAGTTTTGTGCCTGAATGTTGGTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000570891.5
ENST00000574767.5
ENST00000577161.5
ENST00000649732.1
CDS TCA 72 bp TTCTGTAAATTTGCACCGATGGTTTCCAGAGCTTTCTaGGGACCCATCGACAGAGGATCGATCCAGCATTCC +
Preference number: 6 (lower is better)
Translates to: FCKFAPMVSRAF*GPIDRGSIQHS
Trigger: GGAATGCTGGATCGATCCTCTGTCGATGGGTCCTCAGAAAGCTCTGGAAACCATCGGTGCAAATTTACAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000570891.5
ENST00000577161.5
ENST00000649732.1
CDS TCA 72 bp CTGGAGAAGGCAAGGCGTAGTTCTTTTCCTCTTCTATaGACTGCAGGGCCACGGTGCAGAAATTGCTTTCAT +
Preference number: 6 (lower is better)
Translates to: LEKARRSSFPLL*TAGPRCRNCFH
Trigger: ATGAAAGCAATTTCTGCACCGTGGCCCTGCAGTTCATAGAAGAGGAAAAGAACTACGCCTTGCCTTCTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000575542.5
ENST00000577161.5
CDS TCA 72 bp AGTATGACCTATCCTGGTACTAAGACGCCTCCGCAGTaGACAAAGGTAAGGAGAGGGTGTTCTTGGAAATCG +
Preference number: 6 (lower is better)
Translates to: SMTYPGTKTPPQ*TKVRRGCSWKS
Trigger: CGATTTCCAAGAACACCCTCTCCTTACCTTTGTTCACTGCGGAGGCGTCTTAGTACCAGGATAGGTCATACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649732.1
CDS CAA 72 bp CTCTGTTACATTGAGACCCTCTGTCCTAGCTGGTGCTaGAAGTGGCTCTTTACCCACACATGGTGTTGTAAC +
Preference number: 6 (lower is better)
Translates to: LCYIETLCPSWC*KWLFTHTWCCN
Trigger: GTTACAACACCATGTGTGGGTAAAGAGCCACTTCAAGCACCAGCTAGGACAGAGGGTCTCAATGTAACAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573746.1
CDS CAA 90 bp TTTTTCATACTCTGTTACATTGAGACCCTCTGTCCTAGCTGGTGCTaGAAGTGGCTCTTTACCCACACATGGTGTTGTAACAGCACGCAC +
Preference number: 6 (lower is better)
Translates to: FFILCYIETLCPSWC*KWLFTHTWCCNSTH
Trigger: GTGCGTGCTGTTACAACACCATGTGTGGGTAAAGAGCCACTTCAAGCACCAGCTAGGACAGAGGGTCTCAATGTAACAGAGTATGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573746.1
CDS TCA 72 bp TCTGTTACATTGAGACCCTCTGTCCTAGCTGGTGCTTaGAGTGGCTCTTTACCCACACATGGTGTTGTAACA +
Preference number: 6 (lower is better)
Translates to: SVTLRPSVLAGA*SGSLPTHGVVT
Trigger: TGTTACAACACCATGTGTGGGTAAAGAGCCACTTCAAGCACCAGCTAGGACAGAGGGTCTCAATGTAACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573746.1
CDS GCA 72 bp ATACTCTGTTACATTGAGACCCTCTGTCCTAGCTGGTaGTTGAAGTGGCTCTTTACCCACACATGGTGTTGT +
Preference number: 6 (lower is better)
Translates to: ILCYIETLCPSW*LKWLFTHTWCC
Trigger: ACAACACCATGTGTGGGTAAAGAGCCACTTCAAGCACCAGCTAGGACAGAGGGTCTCAATGTAACAGAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573746.1
CDS CCA 72 bp TTCATACTCTGTTACATTGAGACCCTCTGTCCTAGCTaGTGCTTGAAGTGGCTCTTTACCCACACATGGTGT +
Preference number: 6 (lower is better)
Translates to: FILCYIETLCPS*CLKWLFTHTWC
Trigger: ACACCATGTGTGGGTAAAGAGCCACTTCAAGCACCAGCTAGGACAGAGGGTCTCAATGTAACAGAGTATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573746.1
CDS CCA 72 bp TCCGATCCTTCATCCTCCAGCTCTGAGCTAAGGATTTaGAGCCTTCAATTTTCTCACAGTGCCTCTTTTTCA +
Preference number: 6 (lower is better)
Translates to: SDPSSSSSELRI*SLQFSHSASFS
Trigger: TGAAAAAGAGGCACTGTGAGAAAATTGAAGGCTCCAAATCCTTAGCTCAGAGCTGGAGGATGAAGGATCGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000570891.5
ENST00000573746.1
ENST00000574767.5
ENST00000577161.5
ENST00000649732.1
CDS CAA 90 bp CTGTCTGGCTCAGGAATAGAAGTCACTGGATTCTCACCTTTGCAATaGTATTTAATCTGCTGTAATACATTGATTCAACTGAAGCACAGG +
Preference number: 6 (lower is better)
Translates to: LSGSGIEVTGFSPLQ*YLICCNTLIQLKHR
Trigger: CCTGTGCTTCAGTTGAATCAATGTATTACAGCAGATTAAATACAATTGCAAAGGTGAGAATCCAGTGACTTCTATTCCTGAGCCAGACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573746.1
CDS CCA 72 bp GAAATAAGAAACAAAAACGGGAAATCGAAAACCAAATaGATAAAGAGTGCGGAGACCCTTACTCAGGCAAAA +
Preference number: 6 (lower is better)
Translates to: EIRNKNGKSKTK*IKSAETLTQAK
Trigger: TTTTGCCTGAGTAAGGGTCTCCGCACTCTTTATCCATTTGGTTTTCGATTTCCCGTTTTTGTTTCTTATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306801.8
ENST00000544334.6
ENST00000570891.5
ENST00000574767.5
ENST00000577161.5
ENST00000649732.1
CDS CCA 72 bp AATCTCTTTACTGTCTGGCTCAGGAATAGAAGTCACTaGATTCTCACCTTTGCAATTGTATTTAATCTGCTG +
Preference number: 6 (lower is better)
Translates to: NLFTVWLRNRSH*ILTFAIVFNLL
Trigger: CAGCAGATTAAATACAATTGCAAAGGTGAGAATCCAGTGACTTCTATTCCTGAGCCAGACAGTAAAGAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573746.1
CDS CCA 72 bp GCAATGTTTTTCATTGTTGCAAATCTCTTTACTGTCTaGCTCAGGAATAGAAGTCACTGGATTCTCACCTTT +
Preference number: 6 (lower is better)
Translates to: AMFFIVANLFTV*LRNRSHWILTF
Trigger: AAAGGTGAGAATCCAGTGACTTCTATTCCTGAGCCAGACAGTAAAGAGATTTGCAACAATGAAAAACATTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573746.1
CDS CAA 72 bp AAAGGCAAAGAGAGTGTACCTATTTATGCAGCGTACTaGGATGTTCACAGAAAAGACAACACATTCAGAACA +
Preference number: 6 (lower is better)
Translates to: KGKESVPIYAAY*DVHRKDNTFRT
Trigger: TGTTCTGAATGTGTTGTCTTTTCTGTGAACATCCAAGTACGCTGCATAAATAGGTACACTCTCTTTGCCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS CAA 90 bp AACTTAGTTAAAGGCAAAGAGAGTGTACCTATTTATGCAGCGTACTaGGATGTTCACAGAAAAGACAACACATTCAGAACAAATGCTCTG +
Preference number: 6 (lower is better)
Translates to: NLVKGKESVPIYAAY*DVHRKDNTFRTNAL
Trigger: CAGAGCATTTGTTCTGAATGTGTTGTCTTTTCTGTGAACATCCAAGTACGCTGCATAAATAGGTACACTCTCTTTGCCTTTAACTAAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576366.1
CDS GCA 72 bp GTCACTGGATTCTCACCTTTGCAATTGTATTTAATCTaGTGTAATACATTGATTCAACTGAAGCACAGGAAG +
Preference number: 6 (lower is better)
Translates to: VTGFSPLQLYLI*CNTLIQLKHRK
Trigger: CTTCCTGTGCTTCAGTTGAATCAATGTATTACAGCAGATTAAATACAATTGCAAAGGTGAGAATCCAGTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573746.1
CDS CAA 72 bp TTGTTTGATACACACCAAAACTCCACAAGCGGTTTGTaGGATAAGGAAACTGTTTCAGTAGCTTTTTCATAC +
Preference number: 6 (lower is better)
Translates to: LFDTHQNSTSGL*DKETVSVAFSY
Trigger: GTATGAAAAAGCTACTGAAACAGTTTCCTTATCCAACAAACCGCTTGTGGAGTTTTGGTGTGTATCAAACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573746.1
CDS CAA 72 bp GTATTGTTTGATACACACCAAAACTCCACAAGCGGTTaGTTGGATAAGGAAACTGTTTCAGTAGCTTTTTCA +
Preference number: 6 (lower is better)
Translates to: VLFDTHQNSTSG*LDKETVSVAFS
Trigger: TGAAAAAGCTACTGAAACAGTTTCCTTATCCAACAAACCGCTTGTGGAGTTTTGGTGTGTATCAAACAATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573746.1
CDS CAA 90 bp TTGTCAGTATTGTTTGATACACACCAAAACTCCACAAGCGGTTTGTaGGATAAGGAAACTGTTTCAGTAGCTTTTTCATACTCTGTTACA +
Preference number: 6 (lower is better)
Translates to: LSVLFDTHQNSTSGL*DKETVSVAFSYSVT
Trigger: TGTAACAGAGTATGAAAAAGCTACTGAAACAGTTTCCTTATCCAACAAACCGCTTGTGGAGTTTTGGTGTGTATCAAACAATACTGACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573746.1
CDS CAA 90 bp TCTTTACTGTCTGGCTCAGGAATAGAAGTCACTGGATTCTCACCTTaGCAATTGTATTTAATCTGCTGTAATACATTGATTCAACTGAAG +
Preference number: 6 (lower is better)
Translates to: SLLSGSGIEVTGFSP*QLYLICCNTLIQLK
Trigger: CTTCAGTTGAATCAATGTATTACAGCAGATTAAATACAATTGCAAAGGTGAGAATCCAGTGACTTCTATTCCTGAGCCAGACAGTAAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573746.1
CDS CAA 72 bp TCTGGCTCAGGAATAGAAGTCACTGGATTCTCACCTTaGCAATTGTATTTAATCTGCTGTAATACATTGATT +
Preference number: 6 (lower is better)
Translates to: SGSGIEVTGFSP*QLYLICCNTLI
Trigger: AATCAATGTATTACAGCAGATTAAATACAATTGCAAAGGTGAGAATCCAGTGACTTCTATTCCTGAGCCAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573746.1
CDS CAA 72 bp ATGGCCATGAATAAGAAACCATTAACTAGAAGGGTTTaGAATGAGTCAAAAATTACTGCTATCAGAAAGGGA +
Preference number: 6 (lower is better)
Translates to: MAMNKKPLTRRV*NESKITAIRKG
Trigger: TCCCTTTCTGATAGCAGTAATTTTTGACTCATTCAAAACCCTTCTAGTTAATGGTTTCTTATTCATGGCCAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577161.5