Pregenerated sensors for RPS8 (Homo sapiens)
Ensembl gene IDs: ENSG00000142937Ensembl transcript IDs: ENST00000464658.1, ENST00000470475.1, ENST00000484599.1, ENST00000485390.5, ENST00000497035.5
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TACACGTGCGGCCAGGCCGGGGCCTCCTCCTCGCGGCAGCCATGTTaGCGCCGCTCGGAGCCCGCAGCCCGCGGCCCGGAACCCGGAGCC | + |
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Preference number: 5 (lower is better) Translates to: YTCGQAGASSSRQPC*RRSEPAARGPEPGA Trigger: GGCTCCGGGTTCCGGGCCGCGGGCTGCGGGCTCCGAGCGGCGCCAACATGGCTGCCGCGAGGAGGAGGCCCCGGCCTGGCCGCACGTGTA 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485390.5 |
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| CDS CCA 90 bp | CCCGGAACCCGGAGCCCAGAGCCTTCGCAGCCCCCAGAGACGGGCTaGGCGGCCGAAACCCGAGGGCCACCACTCCTCGTGGCTGTCCCT | + |
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Preference number: 5 (lower is better) Translates to: PGTRSPEPSQPPETG*AAETRGPPLLVAVP Trigger: AGGGACAGCCACGAGGAGTGGTGGCCCTCGGGTTTCGGCCGCCCAGCCCGTCTCTGGGGGCTGCGAAGGCTCTGGGCTCCGGGTTCCGGG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000485390.5 |
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| CDS GCA 90 bp | TATGTTTGGCAACCCGCAGTCTTTACCAGCCCCAATCTCTCAGGCTaGAGAGTTCAGAAAGATCAGAGCAGGTCGGGCACGGTGACTCAC | + |
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Preference number: 5 (lower is better) Translates to: YVWQPAVFTSPNLSG*RVQKDQSRSGTVTH Trigger: GTGAGTCACCGTGCCCGACCTGCTCTGATCTTTCTGAACTCTGCAGCCTGAGAGATTGGGGCTGGTAAAGACTGCGGGTTGCCAAACATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000464658.1 ENST00000470475.1 |
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| CDS CCA 90 bp | CAGTTCGTCTTCCACAACCCCCTAACCCACGTTTCTAGTTATGTTTaGCAACCCGCAGTCTTTACCAGCCCCAATCTCTCAGGCTGCAGA | + |
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Preference number: 5 (lower is better) Translates to: QFVFHNPLTHVSSYV*QPAVFTSPNLSGCR Trigger: TCTGCAGCCTGAGAGATTGGGGCTGGTAAAGACTGCGGGTTGCCAAACATAACTAGAAACGTGGGTTAGGGGGTTGTGGAAGACGAACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000464658.1 ENST00000470475.1 |
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| CDS CCA 90 bp | TTGTGCTCGCAGCCTGTTATCAGTGAACCCTTTAGACTGCATGGCTaGCAGTCAAAGGAACTGAGACAAGGGAAAAGTGCCTCGGCACAC | + |
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Preference number: 5 (lower is better) Translates to: LCSQPVISEPFRLHG*QSKELRQGKSASAH Trigger: GTGTGCCGAGGCACTTTTCCCTTGTCTCAGTTCCTTTGACTGCCAGCCATGCAGTCTAAAGGGTTCACTGATAACAGGCTGCGAGCACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484599.1 |
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| CDS TCA 90 bp | TTATCAGTGAACCCTTTAGACTGCATGGCTGGCAGTCAAAGGAACTaGGACAAGGGAAAAGTGCCTCGGCACACTCAATCTCTGCGACTC | + |
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Preference number: 5 (lower is better) Translates to: LSVNPLDCMAGSQRN*DKGKVPRHTQSLRL Trigger: GAGTCGCAGAGATTGAGTGTGCCGAGGCACTTTTCCCTTGTCTCAGTTCCTTTGACTGCCAGCCATGCAGTCTAAAGGGTTCACTGATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484599.1 |
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| CDS GCA 90 bp | CCATTTCAGCTTCATACGAATAGGGTGACCAAACGTTCCCCTTTGTaGTCGCAGCCTGTTATCAGTGAACCCTTTAGACTGCATGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: PFQLHTNRVTKRSPL*SQPVISEPFRLHGW Trigger: CCAGCCATGCAGTCTAAAGGGTTCACTGATAACAGGCTGCGAGCACAAAGGGGAACGTTTGGTCACCCTATTCGTATGAAGCTGAAATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484599.1 |
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| CDS GCA 90 bp | TGGGCAGAGACTTCCCCAAATACAAAGACTCCAAGCACGGGCCTATaGAGACTCTTCTACCCAATGCTTCCCATTTCAGCTTCATACGAA | + |
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Preference number: 5 (lower is better) Translates to: WAETSPNTKTPSTGL*RLFYPMLPISASYE Trigger: TTCGTATGAAGCTGAAATGGGAAGCATTGGGTAGAAGAGTCTGCATAGGCCCGTGCTTGGAGTCTTTGTATTTGGGGAAGTCTCTGCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484599.1 |
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| CDS TCA 90 bp | ACTCTTCTACCCAATGCTTCCCATTTCAGCTTCATACGAATAGGGTaGCCAAACGTTCCCCTTTGTGCTCGCAGCCTGTTATCAGTGAAC | + |
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Preference number: 5 (lower is better) Translates to: TLLPNASHFSFIRIG*PNVPLCARSLLSVN Trigger: GTTCACTGATAACAGGCTGCGAGCACAAAGGGGAACGTTTGGTCACCCTATTCGTATGAAGCTGAAATGGGAAGCATTGGGTAGAAGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484599.1 |
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| CDS GCA 90 bp | ATACAAAGACTCCAAGCACGGGCCTATGCAGACTCTTCTACCCAATaGTTCCCATTTCAGCTTCATACGAATAGGGTGACCAAACGTTCC | + |
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Preference number: 5 (lower is better) Translates to: IQRLQARAYADSSTQ*FPFQLHTNRVTKRS Trigger: GGAACGTTTGGTCACCCTATTCGTATGAAGCTGAAATGGGAAGCATTGGGTAGAAGAGTCTGCATAGGCCCGTGCTTGGAGTCTTTGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484599.1 |
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| CDS CAA 90 bp | ATACACGTGCGGCCAGGCCGGGGCCTCCTCCTCGCGGCAGCCATGTaGGCGCCGCTCGGAGCCCGCAGCCCGCGGCCCGGAACCCGGAGC | + |
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Preference number: 6 (lower is better) Translates to: IHVRPGRGLLLAAAM*APLGARSPRPGTRS Trigger: GCTCCGGGTTCCGGGCCGCGGGCTGCGGGCTCCGAGCGGCGCCAACATGGCTGCCGCGAGGAGGAGGCCCCGGCCTGGCCGCACGTGTAT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485390.5 |
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| CDS CCA 72 bp | CGGAGCCCAGAGCCTTCGCAGCCCCCAGAGACGGGCTaGGCGGCCGAAACCCGAGGGCCACCACTCCTCGTG | + |
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Preference number: 6 (lower is better) Translates to: RSPEPSQPPETG*AAETRGPPLLV Trigger: CACGAGGAGTGGTGGCCCTCGGGTTTCGGCCGCCCAGCCCGTCTCTGGGGGCTGCGAAGGCTCTGGGCTCCG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000485390.5 |
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| CDS GCA 72 bp | CACGAGCCTAGGAGGGTCTCGCAGGCTGCTGACCTCTaGCGACCCCCGGCGACTCGCCTCCGACCCTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: HEPRRVSQAADL*RPPATRLRPWA Trigger: AGCCCAGGGTCGGAGGCGAGTCGCCGGGGGTCGGCAGAGGTCAGCAGCCTGCGAGACCCTCCTAGGCTCGTG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000497035.5 |
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| CDS CAA 90 bp | GTTGGCTTCCCCACCGCGCACTCGGGAGTATGCAGCATTACCGAGTaGTCATCATACACGTGCGGCCAGGCCGGGGCCTCCTCCTCGCGG | + |
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Preference number: 6 (lower is better) Translates to: VGFPTAHSGVCSITE*SSYTCGQAGASSSR Trigger: CCGCGAGGAGGAGGCCCCGGCCTGGCCGCACGTGTATGATGACAACTCGGTAATGCTGCATACTCCCGAGTGCGCGGTGGGGAAGCCAAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485390.5 |
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| CDS CAA 72 bp | CCCACCGCGCACTCGGGAGTATGCAGCATTACCGAGTaGTCATCATACACGTGCGGCCAGGCCGGGGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: PTAHSGVCSITE*SSYTCGQAGAS Trigger: GGAGGCCCCGGCCTGGCCGCACGTGTATGATGACAACTCGGTAATGCTGCATACTCCCGAGTGCGCGGTGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485390.5 |
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| CDS TCA 72 bp | TGCATGTGGAAGCGGGGAAGGAAGCTTGAGCCACTGTaGCTCGGTGCTAGCGACTCGCCAGCTCCCGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: CMWKRGRKLEPL*LGASDSPAPGD Trigger: GTCTCCGGGAGCTGGCGAGTCGCTAGCACCGAGTCACAGTGGCTCAAGCTTCCTTCCCCGCTTCCACATGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485390.5 |
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| CDS GCA 72 bp | CAACCCGCAGTCTTTACCAGCCCCAATCTCTCAGGCTaGAGAGTTCAGAAAGATCAGAGCAGGTCGGGCACG | + |
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Preference number: 6 (lower is better) Translates to: QPAVFTSPNLSG*RVQKDQSRSGT Trigger: CGTGCCCGACCTGCTCTGATCTTTCTGAACTCTGCAGCCTGAGAGATTGGGGCTGGTAAAGACTGCGGGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000464658.1 ENST00000470475.1 |
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| CDS GCA 72 bp | CTCCAAGCACGGGCCTATGCAGACTCTTCTACCCAATaGTTCCCATTTCAGCTTCATACGAATAGGGTGACC | + |
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Preference number: 6 (lower is better) Translates to: LQARAYADSSTQ*FPFQLHTNRVT Trigger: GGTCACCCTATTCGTATGAAGCTGAAATGGGAAGCATTGGGTAGAAGAGTCTGCATAGGCCCGTGCTTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484599.1 |
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| CDS TCA 72 bp | AACCCTTTAGACTGCATGGCTGGCAGTCAAAGGAACTaGGACAAGGGAAAAGTGCCTCGGCACACTCAATCT | + |
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Preference number: 6 (lower is better) Translates to: NPLDCMAGSQRN*DKGKVPRHTQS Trigger: AGATTGAGTGTGCCGAGGCACTTTTCCCTTGTCTCAGTTCCTTTGACTGCCAGCCATGCAGTCTAAAGGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484599.1 |
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| CDS CCA 72 bp | CAGCCTGTTATCAGTGAACCCTTTAGACTGCATGGCTaGCAGTCAAAGGAACTGAGACAAGGGAAAAGTGCC | + |
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Preference number: 6 (lower is better) Translates to: QPVISEPFRLHG*QSKELRQGKSA Trigger: GGCACTTTTCCCTTGTCTCAGTTCCTTTGACTGCCAGCCATGCAGTCTAAAGGGTTCACTGATAACAGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484599.1 |
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| CDS CAA 90 bp | TTCCCATTTCAGCTTCATACGAATAGGGTGACCAAACGTTCCCCTTaGTGCTCGCAGCCTGTTATCAGTGAACCCTTTAGACTGCATGGC | + |
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Preference number: 6 (lower is better) Translates to: FPFQLHTNRVTKRSP*CSQPVISEPFRLHG Trigger: GCCATGCAGTCTAAAGGGTTCACTGATAACAGGCTGCGAGCACAAAGGGGAACGTTTGGTCACCCTATTCGTATGAAGCTGAAATGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484599.1 |
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| CDS GCA 72 bp | CTTCATACGAATAGGGTGACCAAACGTTCCCCTTTGTaGTCGCAGCCTGTTATCAGTGAACCCTTTAGACTG | + |
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Preference number: 6 (lower is better) Translates to: LHTNRVTKRSPL*SQPVISEPFRL Trigger: CAGTCTAAAGGGTTCACTGATAACAGGCTGCGAGCACAAAGGGGAACGTTTGGTCACCCTATTCGTATGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484599.1 |
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| CDS GCA 72 bp | ACTTCCCCAAATACAAAGACTCCAAGCACGGGCCTATaGAGACTCTTCTACCCAATGCTTCCCATTTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: TSPNTKTPSTGL*RLFYPMLPISA Trigger: AGCTGAAATGGGAAGCATTGGGTAGAAGAGTCTGCATAGGCCCGTGCTTGGAGTCTTTGTATTTGGGGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484599.1 |
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| CDS CAA 72 bp | CAGCTTCATACGAATAGGGTGACCAAACGTTCCCCTTaGTGCTCGCAGCCTGTTATCAGTGAACCCTTTAGA | + |
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Preference number: 6 (lower is better) Translates to: QLHTNRVTKRSP*CSQPVISEPFR Trigger: TCTAAAGGGTTCACTGATAACAGGCTGCGAGCACAAAGGGGAACGTTTGGTCACCCTATTCGTATGAAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484599.1 |
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| CDS CCA 72 bp | TTGTTTTACGAGTACAACCTGCTCACAGGAGAAATTTaGCATCAAGTAAACTGGAGGACAAATGGCCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: LFYEYNLLTGEI*HQVNWRTNGPG Trigger: GCCAGGGCCATTTGTCCTCCAGTTTACTTGATGCCAAATTTCTCCTGTGAGCAGGTTGTACTCGTAAAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000464658.1 ENST00000484599.1 |
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