Pregenerated sensors for RPS7 (Homo sapiens)
Ensembl gene IDs: ENSG00000171863Ensembl transcript IDs: ENST00000407445.8, ENST00000472966.1, ENST00000481006.1
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | CTAGTCCTGAGTTTACTACAGTCATTGCTATGGTGGCGCATGGAGACTGGTTACTGTATCCCCACCCTGTaGGCAAGGCTCGCCCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LVLSLLQSLLWWRMETGYCIPTL*ARLAPP Trigger: TGGAGGGGCGAGCCTTGCTCACAGGGTGGGGATACA...GTAACCAGTCTCCATGCGCCACCATAGCAATGACTGTAGTAAACTCAGGACTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000407445.8 |
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| CDS-3UTR TCA 90 bp | AAAGGAGAGCAGGCTGAAGTGCGGGTAAAAGAACTAGTCCTGAGTTTACTACAGTTCTCCTGGGAGAACTaGAGGCACAGCGGTCAGCGT | + |
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Preference number: 4 (lower is better) Translates to: KGEQAEVRVKELVLSLLQFSWEN*RHSGQR Trigger: ACGCTGACCGCTGTGCCTTCAGTTCTCCCAGGAGAA...CTGTAGTAAACTCAGGACTAGTTCTTTTACCCGCACTTCAGCCTGCTCTCCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000407445.8 |
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| CDS-3UTR TCA 90 bp | TCCAAAGGAGAGCAGGCTGAAGTGCGGGTAAAAGAACTAGTCCTGAGTTTACTACAAAGGAGAGCAGGCTaGAGTGCGGGTAAAAGAACT | + |
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Preference number: 4 (lower is better) Translates to: SKGEQAEVRVKELVLSLLQRRAG*SAGKRT Trigger: AGTTCTTTTACCCGCACTTCAGCCTGCTCTCCTTTG...TAGTAAACTCAGGACTAGTTCTTTTACCCGCACTTCAGCCTGCTCTCCTTTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000407445.8 |
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| CDS-3UTR CCA 90 bp | AAAGGAGAGCAGGCTGAAGTGCGGGTAAAAGAACTAGTCCTGAGTTTACTACAGCAGTCATTGCTATGGTaGCGCATGGAGACTGGTTAC | + |
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Preference number: 4 (lower is better) Translates to: KGEQAEVRVKELVLSLLQQSLLW*RMETGY Trigger: GTAACCAGTCTCCATGCGCCACCATAGCAATGACTG...CTGTAGTAAACTCAGGACTAGTTCTTTTACCCGCACTTCAGCCTGCTCTCCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000407445.8 |
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| CDS-3UTR CCA 90 bp | AAAGGAGAGCAGGCTGAAGTGCGGGTAAAAGAACTAGTCCTGAGTTTACTACAGCTACAGTCATTGCTATaGTGGCGCATGGAGACTGGT | + |
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Preference number: 4 (lower is better) Translates to: KGEQAEVRVKELVLSLLQLQSLL*WRMETG Trigger: ACCAGTCTCCATGCGCCACCATAGCAATGACTGTAG...CTGTAGTAAACTCAGGACTAGTTCTTTTACCCGCACTTCAGCCTGCTCTCCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000407445.8 |
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| CDS-3UTR GCA 90 bp | CTAGTCCTGAGTTTACTACAGTCATTGCTATGGTGGCGCATGGAGACTGGTTACGTTTACTACAGTCATTaGTATGGTGGCGCATGGAGA | + |
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Preference number: 4 (lower is better) Translates to: LVLSLLQSLLWWRMETGYVYYSH*YGGAWR Trigger: TCTCCATGCGCCACCATAGCAATGACTGTAGTAAAC...GTAACCAGTCTCCATGCGCCACCATAGCAATGACTGTAGTAAACTCAGGACTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000407445.8 |
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| CDS-3UTR CCA 90 bp | AAAGGAGAGCAGGCTGAAGTGCGGGTAAAAGAACTAGTCCTGAGTTTACTACAGTGCTATGGTGGCGCATaGAGACTGGTTACACTAAAA | + |
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Preference number: 4 (lower is better) Translates to: KGEQAEVRVKELVLSLLQCYGGA*RLVTLK Trigger: TTTTAGTGTAACCAGTCTCCATGCGCCACCATAGCA...CTGTAGTAAACTCAGGACTAGTTCTTTTACCCGCACTTCAGCCTGCTCTCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000407445.8 |
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| CDS-3UTR CCA 90 bp | AAAGGAGAGCAGGCTGAAGTGCGGGTAAAAGAACTAGTCCTGAGTTTACTACAGAATCCACTCTCACTGTaGCTGAACCTTTCCATGATA | + |
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Preference number: 4 (lower is better) Translates to: KGEQAEVRVKELVLSLLQNPLSL*LNLSMI Trigger: TATCATGGAAAGGTTCAGCCACAGTGAGAGTGGATT...CTGTAGTAAACTCAGGACTAGTTCTTTTACCCGCACTTCAGCCTGCTCTCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000407445.8 |
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| CDS-3UTR TCA 90 bp | TCCAAAGGAGAGCAGGCTGAAGTGCGGGTAAAAGAACTAGTCCTGAGTTTACTATCCATGATAAAATGTTaGCCTATTACCTTGTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: SKGEQAEVRVKELVLSLLSMIKC*PITLCS Trigger: GGAACACAAGGTAATAGGTCAACATTTTATCATGGA...TAGTAAACTCAGGACTAGTTCTTTTACCCGCACTTCAGCCTGCTCTCCTTTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000407445.8 |
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| CDS GCA 90 bp | GTTTCTCCACCGCCCGCATGTGGACAGCTTAAGCCGCAGGGTACCTaGAACCCCACTCCCCGCACCTGGGCGGTATCACTCCCAAACAAC | + |
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Preference number: 5 (lower is better) Translates to: VSPPPACGQLKPQGT*NPTPRTWAVSLPNN Trigger: GTTGTTTGGGAGTGATACCGCCCAGGTGCGGGGAGTGGGGTTGCAGGTACCCTGCGGCTTAAGCTGTCCACATGCGGGCGGTGGAGAAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481006.1 |
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| CDS CCA 90 bp | GGACAGCTTAAGCCGCAGGGTACCTGCAACCCCACTCCCCGCACCTaGGCGGTATCACTCCCAAACAACACGGCCGAACCTGAGTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: GQLKPQGTCNPTPRT*AVSLPNNTAEPEFR Trigger: CCTGAACTCAGGTTCGGCCGTGTTGTTTGGGAGTGATACCGCCCAGGTGCGGGGAGTGGGGTTGCAGGTACCCTGCGGCTTAAGCTGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481006.1 |
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| CDS TCA 90 bp | TCCCCGCACCTGGGCGGTATCACTCCCAAACAACACGGCCGAACCTaGGTTCAGGTTAGGCGGCCAGGCGGCAAGTCATCATCAACCGTA | + |
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Preference number: 5 (lower is better) Translates to: SPHLGGITPKQHGRT*VQVRRPGGKSSSTV Trigger: TACGGTTGATGATGACTTGCCGCCTGGCCGCCTAACCTGAACTCAGGTTCGGCCGTGTTGTTTGGGAGTGATACCGCCCAGGTGCGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481006.1 |
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| CDS GCA 90 bp | AGGAAGGGAGACTGTTCAGGCCAGGAGGCCAATCACTACCACTTCTaGACCCCCACTTGCGGCAACTCCGGGCTAAGGGTAGAGAGAATC | + |
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Preference number: 5 (lower is better) Translates to: RKGDCSGQEANHYHF*TPTCGNSGLRVERI Trigger: GATTCTCTCTACCCTTAGCCCGGAGTTGCCGCAAGTGGGGGTGCAGAAGTGGTAGTGATTGGCCTCCTGGCCTGAACAGTCTCCCTTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481006.1 |
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| CDS GCA 90 bp | CATGTCTGCAGCAGTCTTCACGACCGGGGACAAGCTCTTCTCCAATaGTGTGGGACAGAACTGTACACCACTGCACCGGGGAAGCCATCA | + |
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Preference number: 5 (lower is better) Translates to: HVCSSLHDRGQALLQ*CGTELYTTAPGKPS Trigger: TGATGGCTTCCCCGGTGCAGTGGTGTACAGTTCTGTCCCACAGCATTGGAGAAGAGCTTGTCCCCGGTCGTGAAGACTGCTGCAGACATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481006.1 |
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| CDS-3UTR CAA 90 bp | TCCAAAGGAGAGCAGGCTGAAGTGCGGGTAAAAGAACTAGTCCTGAGTTTACTAAGTTTACTACAGTCATaGCTATGGTGGCGCATGGAG | + |
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Preference number: 5 (lower is better) Translates to: SKGEQAEVRVKELVLSLLSLLQS*LWWRME Trigger: CTCCATGCGCCACCATAGCAATGACTGTAGTAAACT...TAGTAAACTCAGGACTAGTTCTTTTACCCGCACTTCAGCCTGCTCTCCTTTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000407445.8 |
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| CDS TCA 90 bp | GCCTGCCCTCTGGGCAACTCCAGAGGGCACCTCTTTAAGTCAAAATaGAAATGCAAATCCCAGGTTCCTGAAGTCAAATTAACACTCATT | + |
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Preference number: 5 (lower is better) Translates to: ACPLGNSRGHLFKSK*KCKSQVPEVKLTLI Trigger: AATGAGTGTTAATTTGACTTCAGGAACCTGGGATTTGCATTTTCATTTTGACTTAAAGAGGTGCCCTCTGGAGTTGCCCAGAGGGCAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000472966.1 ENST00000481006.1 |
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| CDS GCA 90 bp | AGGAGTAAGTCAAGAGACGGTTCTTTGTTTCAGCATTTAGGGAGCTaGCTTACATATGGTTATCTGTCTACGTCTCACCCCATAGTAGCT | + |
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Preference number: 5 (lower is better) Translates to: RSKSRDGSLFQHLGS*LTYGYLSTSHPIVA Trigger: AGCTACTATGGGGTGAGACGTAGACAGATAACCATATGTAAGGCAGCTCCCTAAATGCTGAAACAAAGAACCGTCTCTTGACTTACTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481006.1 |
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| CDS TCA 90 bp | TGGAAAAGTGGTAGAATCACTATGACCTACCAGCTAGGCTTAGTGTaGAGGCTTTCAATGTACAGACTAGGTCCCACTAGAAACACTGAA | + |
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Preference number: 5 (lower is better) Translates to: WKSGRITMTYQLGLV*RLSMYRLGPTRNTE Trigger: TTCAGTGTTTCTAGTGGGACCTAGTCTGTACATTGAAAGCCTTCACACTAAGCCTAGCTGGTAGGTCATAGTGATTCTACCACTTTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481006.1 |
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| CDS TCA 90 bp | TACTGCCAACATCTTAATATGTCACAGCCACAAAGGGCAAAAGCCTaGACAAAGTCCATTTCCCAAAACCCTCATCACCTTTCAGAAAGC | + |
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Preference number: 5 (lower is better) Translates to: YCQHLNMSQPQRAKA*TKSISQNPHHLSES Trigger: GCTTTCTGAAAGGTGATGAGGGTTTTGGGAAATGGACTTTGTTCAGGCTTTTGCCCTTTGTGGCTGTGACATATTAAGATGTTGGCAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481006.1 |
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| CDS GCA 90 bp | CTAAAGCACGGATATGATCACATCATTTACTTAGCATCACAGAACTaGCAGTGGAATCTTGCTCCTCGTCTGAATATCACTACCAAGTTC | + |
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Preference number: 5 (lower is better) Translates to: LKHGYDHIIYLASQN*QWNLAPRLNITTKF Trigger: GAACTTGGTAGTGATATTCAGACGAGGAGCAAGATTCCACTGGCAGTTCTGTGATGCTAAGTAAATGATGTGATCATATCCGTGCTTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481006.1 |
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| CDS TCA 90 bp | AAGTTTCAATTAATTGCAAGCTTTTGGGGCAGCTACCATGTACCATaGGACATCAGGAGTAAGTCAAGAGACGGTTCTTTGTTTCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: KFQLIASFWGSYHVP*DIRSKSRDGSLFQH Trigger: ATGCTGAAACAAAGAACCGTCTCTTGACTTACTCCTGATGTCTCATGGTACATGGTAGCTGCCCCAAAAGCTTGCAATTAATTGAAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481006.1 |
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| CDS CCA 90 bp | GTAGCTAACAATAACACTATAGTCTACTCATTTGGATTTCCTATCTaGCAGCGCCCATATACACAGTTAACATCTTCTGGTGGCTCTCAA | + |
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Preference number: 5 (lower is better) Translates to: VANNNTIVYSFGFPI*QRPYTQLTSSGGSQ Trigger: TTGAGAGCCACCAGAAGATGTTAACTGTGTATATGGGCGCTGCCAGATAGGAAATCCAAATGAGTAGACTATAGTGTTATTGTTAGCTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481006.1 |
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| CDS GCA 72 bp | CCGCCCGCATGTGGACAGCTTAAGCCGCAGGGTACCTaGAACCCCACTCCCCGCACCTGGGCGGTATCACTC | + |
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Preference number: 6 (lower is better) Translates to: PPACGQLKPQGT*NPTPRTWAVSL Trigger: GAGTGATACCGCCCAGGTGCGGGGAGTGGGGTTGCAGGTACCCTGCGGCTTAAGCTGTCCACATGCGGGCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481006.1 |
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| CDS CCA 72 bp | AAGCCGCAGGGTACCTGCAACCCCACTCCCCGCACCTaGGCGGTATCACTCCCAAACAACACGGCCGAACCT | + |
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Preference number: 6 (lower is better) Translates to: KPQGTCNPTPRT*AVSLPNNTAEP Trigger: AGGTTCGGCCGTGTTGTTTGGGAGTGATACCGCCCAGGTGCGGGGAGTGGGGTTGCAGGTACCCTGCGGCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481006.1 |
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| CDS GCA 72 bp | CCCAGGCTGAAGTTCAGTGGCGGGATCTCGGCTCACTaGAAGCTCCACCTCCCGGGTTCACGCGATTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: PRLKFSGGISAH*KLHLPGSRDSP Trigger: AGGAGAATCGCGTGAACCCGGGAGGTGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGAACTTCAGCCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481006.1 |
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| CDS TCA 72 bp | CTGGGCGGTATCACTCCCAAACAACACGGCCGAACCTaGGTTCAGGTTAGGCGGCCAGGCGGCAAGTCATCA | + |
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Preference number: 6 (lower is better) Translates to: LGGITPKQHGRT*VQVRRPGGKSS Trigger: TGATGACTTGCCGCCTGGCCGCCTAACCTGAACTCAGGTTCGGCCGTGTTGTTTGGGAGTGATACCGCCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481006.1 |
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| CDS GCA 72 bp | GACTGTTCAGGCCAGGAGGCCAATCACTACCACTTCTaGACCCCCACTTGCGGCAACTCCGGGCTAAGGGTA | + |
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Preference number: 6 (lower is better) Translates to: DCSGQEANHYHF*TPTCGNSGLRV Trigger: TACCCTTAGCCCGGAGTTGCCGCAAGTGGGGGTGCAGAAGTGGTAGTGATTGGCCTCCTGGCCTGAACAGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481006.1 |
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| CDS CAA 90 bp | CTGTTCAGGCCAGGAGGCCAATCACTACCACTTCTGCACCCCCACTaGCGGCAACTCCGGGCTAAGGGTAGAGAGAATCTCATCCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: LFRPGGQSLPLLHPH*RQLRAKGRENLILS Trigger: GCTCAGGATGAGATTCTCTCTACCCTTAGCCCGGAGTTGCCGCAAGTGGGGGTGCAGAAGTGGTAGTGATTGGCCTCCTGGCCTGAACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481006.1 |
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| CDS GCA 72 bp | AGCAGTCTTCACGACCGGGGACAAGCTCTTCTCCAATaGTGTGGGACAGAACTGTACACCACTGCACCGGGG | + |
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Preference number: 6 (lower is better) Translates to: SSLHDRGQALLQ*CGTELYTTAPG Trigger: CCCCGGTGCAGTGGTGTACAGTTCTGTCCCACAGCATTGGAGAAGAGCTTGTCCCCGGTCGTGAAGACTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481006.1 |
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| CDS CCA 72 bp | TCTTCACGACCGGGGACAAGCTCTTCTCCAATGCTGTaGGACAGAACTGTACACCACTGCACCGGGGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: SSRPGTSSSPML*DRTVHHCTGEA Trigger: GGCTTCCCCGGTGCAGTGGTGTACAGTTCTGTCCCACAGCATTGGAGAAGAGCTTGTCCCCGGTCGTGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481006.1 |
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| CDS CAA 72 bp | CCAGGAGGCCAATCACTACCACTTCTGCACCCCCACTaGCGGCAACTCCGGGCTAAGGGTAGAGAGAATCTC | + |
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Preference number: 6 (lower is better) Translates to: PGGQSLPLLHPH*RQLRAKGRENL Trigger: GAGATTCTCTCTACCCTTAGCCCGGAGTTGCCGCAAGTGGGGGTGCAGAAGTGGTAGTGATTGGCCTCCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481006.1 |
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| CDS GCA 72 bp | CAGGAGGCCAATCACTACCACTTCTGCACCCCCACTTaGGGCAACTCCGGGCTAAGGGTAGAGAGAATCTCA | + |
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Preference number: 6 (lower is better) Translates to: QEANHYHFCTPT*GNSGLRVERIS Trigger: TGAGATTCTCTCTACCCTTAGCCCGGAGTTGCCGCAAGTGGGGGTGCAGAAGTGGTAGTGATTGGCCTCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481006.1 |
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| CDS GCA 72 bp | AAGAATAGTTTAAAAGGTAAGCAACCTAGCAACGCCTaGCCTCTGGGCAACTCCAGAGGGCACCTCTTTAAG | + |
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Preference number: 6 (lower is better) Translates to: KNSLKGKQPSNA*PLGNSRGHLFK Trigger: CTTAAAGAGGTGCCCTCTGGAGTTGCCCAGAGGGCAGGCGTTGCTAGGTTGCTTACCTTTTAAACTATTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000472966.1 ENST00000481006.1 |
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| CDS GCA 72 bp | TTTTTCTCCTCAGCAACTAAGTACACACAACATGTCTaGAGCAGTCTTCACGACCGGGGACAAGCTCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: FFSSATKYTQHV*SSLHDRGQALL Trigger: GAGAAGAGCTTGTCCCCGGTCGTGAAGACTGCTGCAGACATGTTGTGTGTACTTAGTTGCTGAGGAGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000481006.1 |
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| CDS CCA 72 bp | ATCATTCAGAATCCACAGCCTCTACTAATACGCCAGTaGACAAAATCTCCCAGATACGCCTTTCCCCATGCC | + |
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Preference number: 6 (lower is better) Translates to: IIQNPQPLLIRQ*TKSPRYAFPHA Trigger: GGCATGGGGAAAGGCGTATCTGGGAGATTTTGTCCACTGGCGTATTAGTAGAGGCTGTGGATTCTGAATGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481006.1 |
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| CDS CCA 72 bp | TGGCACCATAACTCAATCATCACAAACCACAGGGACTaGAGCGCTTTAGAGGAAAAACCCTGCTATACCCAA | + |
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Preference number: 6 (lower is better) Translates to: WHHNSIITNHRD*SALEEKPCYTQ Trigger: TTGGGTATAGCAGGGTTTTTCCTCTAAAGCGCTCCAGTCCCTGTGGTTTGTGATGATTGAGTTATGGTGCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481006.1 |
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| CDS CAA 72 bp | ATCAATCCTGGCACTTCATTCCCCATAGACTTCAGTTaGCACCAATCCCCCATCCGAACTGTAACAGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: INPGTSFPIDFS*HQSPIRTVTGF Trigger: GAAACCTGTTACAGTTCGGATGGGGGATTGGTGCAAACTGAAGTCTATGGGGAATGAAGTGCCAGGATTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000481006.1 |
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| CDS TCA 72 bp | GGTAGAATCACTATGACCTACCAGCTAGGCTTAGTGTaGAGGCTTTCAATGTACAGACTAGGTCCCACTAGA | + |
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Preference number: 6 (lower is better) Translates to: GRITMTYQLGLV*RLSMYRLGPTR Trigger: TCTAGTGGGACCTAGTCTGTACATTGAAAGCCTTCACACTAAGCCTAGCTGGTAGGTCATAGTGATTCTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481006.1 |
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| CDS TCA 72 bp | CATCACAGAACTGCCAGTGGAATCTTGCTCCTCGTCTaGATATCACTACCAAGTTCAAAACCTACCTACCTG | + |
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Preference number: 6 (lower is better) Translates to: HHRTASGILLLV*ISLPSSKPTYL Trigger: CAGGTAGGTAGGTTTTGAACTTGGTAGTGATATTCAGACGAGGAGCAAGATTCCACTGGCAGTTCTGTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481006.1 |
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| CDS GCA 72 bp | TCAAGAGACGGTTCTTTGTTTCAGCATTTAGGGAGCTaGCTTACATATGGTTATCTGTCTACGTCTCACCCC | + |
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Preference number: 6 (lower is better) Translates to: SRDGSLFQHLGS*LTYGYLSTSHP Trigger: GGGGTGAGACGTAGACAGATAACCATATGTAAGGCAGCTCCCTAAATGCTGAAACAAAGAACCGTCTCTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481006.1 |
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| CDS TCA 72 bp | TTAATTGCAAGCTTTTGGGGCAGCTACCATGTACCATaGGACATCAGGAGTAAGTCAAGAGACGGTTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: LIASFWGSYHVP*DIRSKSRDGSL Trigger: CAAAGAACCGTCTCTTGACTTACTCCTGATGTCTCATGGTACATGGTAGCTGCCCCAAAAGCTTGCAATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481006.1 |
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| CDS CAA 72 bp | CAGAGGTTTGTACTGAGGGAAACTAAAGCTATGGATTaGAGGGACAGTCCTCTGGGACTGTTCTTATACTCA | + |
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Preference number: 6 (lower is better) Translates to: QRFVLRETKAMD*RDSPLGLFLYS Trigger: TGAGTATAAGAACAGTCCCAGAGGACTGTCCCTCAAATCCATAGCTTTAGTTTCCCTCAGTACAAACCTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481006.1 |
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| CDS TCA 72 bp | CTCTGGGATAAACTACAAACTCACCAAGGCAATGAGTaGCCATCTCTAGGGAATGTGAGATTAGAGGACTTT | + |
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Preference number: 6 (lower is better) Translates to: LWDKLQTHQGNE*PSLGNVRLEDF Trigger: AAAGTCCTCTAATCTCACATTCCCTAGAGATGGTCACTCATTGCCTTGGTGAGTTTGTAGTTTATCCCAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481006.1 |
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| CDS CAA 72 bp | ACTAGTACTAGCTGCAATCAGCAAATTATCCCAGCCTaGGATCAGTTTCCTCATCCACTGAGAGTAACAATA | + |
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Preference number: 6 (lower is better) Translates to: TSTSCNQQIIPA*DQFPHPLRVTI Trigger: TATTGTTACTCTCAGTGGATGAGGAAACTGATCCAAGGCTGGGATAATTTGCTGATTGCAGCTAGTACTAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481006.1 |
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| CDS CAA 90 bp | TTTGGAAAACAGAGGTTTGTACTGAGGGAAACTAAAGCTATGGATTaGAGGGACAGTCCTCTGGGACTGTTCTTATACTCATTTCCTAAC | + |
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Preference number: 6 (lower is better) Translates to: FGKQRFVLRETKAMD*RDSPLGLFLYSFPN Trigger: GTTAGGAAATGAGTATAAGAACAGTCCCAGAGGACTGTCCCTCAAATCCATAGCTTTAGTTTCCCTCAGTACAAACCTCTGTTTTCCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481006.1 |
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| CDS TCA 72 bp | TTCGAGAAGGCTAAACAACTTAGACGAACAATTGACTaGGCAAACCCTTCTATGGAGTTACTTCCTGATTCT | + |
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Preference number: 6 (lower is better) Translates to: FEKAKQLRRTID*ANPSMELLPDS Trigger: AGAATCAGGAAGTAACTCCATAGAAGGGTTTGCTCAGTCAATTGTTCGTCTAAGTTGTTTAGCCTTCTCGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481006.1 |
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| CDS CAA 90 bp | CTTAGCACTACTAGTACTAGCTGCAATCAGCAAATTATCCCAGCCTaGGATCAGTTTCCTCATCCACTGAGAGTAACAATACAAATTAAA | + |
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Preference number: 6 (lower is better) Translates to: LSTTSTSCNQQIIPA*DQFPHPLRVTIQIK Trigger: TTTAATTTGTATTGTTACTCTCAGTGGATGAGGAAACTGATCCAAGGCTGGGATAATTTGCTGATTGCAGCTAGTACTAGTAGTGCTAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481006.1 |
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| CDS CCA 72 bp | AATAACACTATAGTCTACTCATTTGGATTTCCTATCTaGCAGCGCCCATATACACAGTTAACATCTTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: NNTIVYSFGFPI*QRPYTQLTSSG Trigger: ACCAGAAGATGTTAACTGTGTATATGGGCGCTGCCAGATAGGAAATCCAAATGAGTAGACTATAGTGTTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481006.1 |
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| CDS GCA 72 bp | TCTGAATATCACTACCAAGTTCAAAACCTACCTACCTaGCACCTAACAAATGAGAAGTTTCAATTAATTGCA | + |
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Preference number: 6 (lower is better) Translates to: SEYHYQVQNLPT*HLTNEKFQLIA Trigger: TGCAATTAATTGAAACTTCTCATTTGTTAGGTGGCAGGTAGGTAGGTTTTGAACTTGGTAGTGATATTCAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481006.1 |
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| CDS CAA 72 bp | ACTCAAAACACAGCAGTCTGTCACTTTACAGACTTCTaGTTTCGACTCTTAATTAAAGAACGTACTTTATCT | + |
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Preference number: 6 (lower is better) Translates to: TQNTAVCHFTDF*FRLLIKERTLS Trigger: AGATAAAGTACGTTCTTTAATTAAGAGTCGAAACAAGAAGTCTGTAAAGTGACAGACTGCTGTGTTTTGAGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481006.1 |
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| CDS CAA 72 bp | CCAAAAGATCTAGTTCAAGAAGACAACTACCAATATTaGAGTTTATGCCAGATAACCTGTAAGTCAATCAAG | + |
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Preference number: 6 (lower is better) Translates to: PKDLVQEDNYQY*SLCQITCKSIK Trigger: CTTGATTGACTTACAGGTTATCTGGCATAAACTCAAATATTGGTAGTTGTCTTCTTGAACTAGATCTTTTGG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481006.1 |
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