RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RPS6KL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000198208

Ensembl transcript IDs: ENST00000354625.6, ENST00000553315.1, ENST00000553646.1, ENST00000553789.5, ENST00000553894.6, ENST00000553971.5, ENST00000554834.1, ENST00000554900.1, ENST00000555009.5, ENST00000555647.5, ENST00000555834.5, ENST00000555910.5, ENST00000556776.1, ENST00000556848.5, ENST00000557383.1, ENST00000557413.6

Found 993 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTaGGTTGGGTGTCAGGCAAGGAGGAGAGGCGATCCAGACCAGGCC +
Preference number: 1 (lower is better)
Translates to: CPPFLAQSPLIEGQP*VGCQARRRGDPDQA
Trigger: GGCCTGGTCTGGATCGCCTCTCCTCCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553789.5
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
3UTR GCA 90 bp GGCCATAATTCTGAGGCCCCAGTGGGAGCCCAGCAGGACAGACAGTaGCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCC +
Preference number: 1 (lower is better)
Translates to: GHNSEAPVGAQQDRQ*PPFLAQSPLIEGQP
Trigger: GGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCACTGGGGCCTCAGAATTATGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
3UTR CCA 90 bp TCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTaGGTGTCAGGCAAGGAGGAGAGGCGATCCAGACCAGGCCAGCTG +
Preference number: 1 (lower is better)
Translates to: SIPRPKPADRGPALG*VSGKEERRSRPGQL
Trigger: CAGCTGGCCTGGTCTGGATCGCCTCTCCTCCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553789.5
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
3UTR CCA 90 bp AGTGAGGGGTCTGGTCTGACAGTTGGGCCTTCAGAGCCAGGCACGTaGACCGTGTCAGAAGCGCCACCTGGTGGTGACTGGGATGCTGGC +
Preference number: 1 (lower is better)
Translates to: SEGSGLTVGPSEPGT*TVSEAPPGGDWDAG
Trigger: GCCAGCATCCCAGTCACCACCAGGTGGCGCTTCTGACACGGTCCACGTGCCTGGCTCTGAAGGCCCAACTGTCAGACCAGACCCCTCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR TCA 90 bp CCACCAGCCCTGCGTCCTACTTCCTGGCAGCCCCAAGCTCGCTCTTaGCTTCACTCTGGAGCTTCTACAGGGGAGCCTTCCAACCTGCCC +
Preference number: 1 (lower is better)
Translates to: PPALRPTSWQPQARS*LHSGASTGEPSNLP
Trigger: GGGCAGGTTGGAAGGCTCCCCTGTAGAAGCTCCAGAGTGAAGTCAAGAGCGAGCTTGGGGCTGCCAGGAAGTAGGACGCAGGGCTGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR CCA 90 bp CCCCTACCTCATCCCTCCCTGCACAACAGATGGCATCCCTGCTTCTaGGCCTCCCCAGCTGCACGAACAGCTTCTGGTGGAAGAGGCCTA +
Preference number: 1 (lower is better)
Translates to: PLPHPSLHNRWHPCF*ASPAARTASGGRGL
Trigger: TAGGCCTCTTCCACCAGAAGCTGTTCGTGCAGCTGGGGAGGCCCAGAAGCAGGGATGCCATCTGTTGTGCAGGGAGGGATGAGGTAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR CCA 90 bp GGGAGTCCTCATCCCTCCCTGCACAACAGATGGCATCCCTGCTTCTaGGCCTCCCCAGCTGCACGAACAGCTTCTGGTGGAAGAGGCCTA +
Preference number: 1 (lower is better)
Translates to: GSPHPSLHNRWHPCF*ASPAARTASGGRGL
Trigger: TAGGCCTCTTCCACCAGAAGCTGTTCGTGCAGCTGGGGAGGCCCAGAAGCAGGGATGCCATCTGTTGTGCAGGGAGGGATGAGGACTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555009.5
3UTR GCA 90 bp CTGATGGGTAGATGGTTCAAGCTGCTTAGCAGGGCAAGCCTTGACTaGCCCCACCTCCAGCTTTTCCAGGAGCTGGCCCTTCCTGGGTGG +
Preference number: 1 (lower is better)
Translates to: LMGRWFKLLSRASLD*PHLQLFQELALPGW
Trigger: CCACCCAGGAAGGGCCAGCTCCTGGAAAAGCTGGAGGTGGGGGCAGTCAAGGCTTGCCCTGCTAAGCAGCTTGAACCATCTACCCATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000555647.5
ENST00000557413.6
3UTR GCA 90 bp TCCTGTCCCCTACCTCATCCCTCCCTGCACAACAGATGGCATCCCTaGTTCTGGGCCTCCCCAGCTGCACGAACAGCTTCTGGTGGAAGA +
Preference number: 1 (lower is better)
Translates to: SCPLPHPSLHNRWHP*FWASPAARTASGGR
Trigger: TCTTCCACCAGAAGCTGTTCGTGCAGCTGGGGAGGCCCAGAAGCAGGGATGCCATCTGTTGTGCAGGGAGGGATGAGGTAGGGGACAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR GCA 90 bp CTGAGAGGGAGTCCTCATCCCTCCCTGCACAACAGATGGCATCCCTaGTTCTGGGCCTCCCCAGCTGCACGAACAGCTTCTGGTGGAAGA +
Preference number: 1 (lower is better)
Translates to: LRGSPHPSLHNRWHP*FWASPAARTASGGR
Trigger: TCTTCCACCAGAAGCTGTTCGTGCAGCTGGGGAGGCCCAGAAGCAGGGATGCCATCTGTTGTGCAGGGAGGGATGAGGACTCCCTCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555009.5
3UTR CCA 90 bp CTGGAGCTTCTACAGGGGAGCCTTCCAACCTGCCCCAATGAGCCGTaGTCATTGCATGGAAGAAGCGAGAACACCGTAGGCCAGAGCAGG +
Preference number: 1 (lower is better)
Translates to: LELLQGSLPTCPNEP*SLHGRSENTVGQSR
Trigger: CCTGCTCTGGCCTACGGTGTTCTCGCTTCTTCCATGCAATGACCACGGCTCATTGGGGCAGGTTGGAAGGCTCCCCTGTAGAAGCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR TCA 90 bp TCTAGTGGAAATTTCCCAGGTCGGTCCCACGCCCCGGTGACAGGGTaGACCCTGAGAGGAGCCCCCAAACTGGAGGCAATTGTCTTTGAG +
Preference number: 1 (lower is better)
Translates to: SSGNFPGRSHAPVTG*TLRGAPKLEAIVFE
Trigger: CTCAAAGACAATTGCCTCCAGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGACCGACCTGGGAAATTTCCACTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR GCA 90 bp GGGCACAACATGGCAGTGAGTGAGTCACAGAACCTCACAGTAGGGTaGAGCAGGTGGTCAACAGCTCAGCGCCAGTGCCACAGAAGGCAA +
Preference number: 1 (lower is better)
Translates to: GHNMAVSESQNLTVG*SRWSTAQRQCHRRQ
Trigger: TTGCCTTCTGTGGCACTGGCGCTGAGCTGTTGACCACCTGCTGCACCCTACTGTGAGGTTCTGTGACTCACTCACTGCCATGTTGTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR TCA 90 bp CCAGCTGCACGAACAGCTTCTGGTGGAAGAGGCCTACTCGCTGTGTaGCTAAGAGGACTAGCCAGGACAGTCTGGTTTGGGTCCACTGAG +
Preference number: 1 (lower is better)
Translates to: PAARTASGGRGLLAV*LRGLARTVWFGSTE
Trigger: CTCAGTGGACCCAAACCAGACTGTCCTGGCTAGTCCTCTTAGTCACACAGCGAGTAGGCCTCTTCCACCAGAAGCTGTTCGTGCAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR TCA 90 bp CTTCACTCTGGAGCTTCTACAGGGGAGCCTTCCAACCTGCCCCAATaGGCCGTGGTCATTGCATGGAAGAAGCGAGAACACCGTAGGCCA +
Preference number: 1 (lower is better)
Translates to: LHSGASTGEPSNLPQ*AVVIAWKKREHRRP
Trigger: TGGCCTACGGTGTTCTCGCTTCTTCCATGCAATGACCACGGCTCATTGGGGCAGGTTGGAAGGCTCCCCTGTAGAAGCTCCAGAGTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR TCA 90 bp CAGAGTCCCTGTCTGCTGAGCTCTTGCAGTGAGGCCATCCCTCTGTaGAGGTCTGTCACAGGAGGGAAGTGGGTCCCAGAGAGTAGAACT +
Preference number: 1 (lower is better)
Translates to: QSPCLLSSCSEAIPL*RSVTGGKWVPESRT
Trigger: AGTTCTACTCTCTGGGACCCACTTCCCTCCTGTGACAGACCTTCACAGAGGGATGGCCTCACTGCAAGAGCTCAGCAGACAGGGACTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR TCA 90 bp CAGTCTGGTTTGGGTCCACTGAGCCAGTGGATCAGTGTCCTGAGATaGGTCTCCAGAGATGTCCTGAGTGGGGCACAACATGGCAGTGAG +
Preference number: 1 (lower is better)
Translates to: QSGLGPLSQWISVLR*VSRDVLSGAQHGSE
Trigger: CTCACTGCCATGTTGTGCCCCACTCAGGACATCTCTGGAGACTCATCTCAGGACACTGATCCACTGGCTCAGTGGACCCAAACCAGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR GCA 90 bp GCTCTTGACTTCACTCTGGAGCTTCTACAGGGGAGCCTTCCAACCTaGCCCAATGAGCCGTGGTCATTGCATGGAAGAAGCGAGAACACC +
Preference number: 1 (lower is better)
Translates to: ALDFTLELLQGSLPT*PNEPWSLHGRSENT
Trigger: GGTGTTCTCGCTTCTTCCATGCAATGACCACGGCTCATTGGGGCAGGTTGGAAGGCTCCCCTGTAGAAGCTCCAGAGTGAAGTCAAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR CCA 90 bp CTTCCGTCACCCGCTCTGCCCTCTTACCCCACCAGCTTGCTCCATTaGATGGTACTGAAAAAGGGATGGGACTTGAGTTTGCTGACACCA +
Preference number: 1 (lower is better)
Translates to: LPSPALPSYPTSLLH*MVLKKGWDLSLLTP
Trigger: TGGTGTCAGCAAACTCAAGTCCCATCCCTTTTTCAGTACCATCCAATGGAGCAAGCTGGTGGGGTAAGAGGGCAGAGCGGGTGACGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553315.1
3UTR TCA 90 bp GAGTGTACAGGGTGGGTAGCTAACCTAGACTGCAGGTGGCAGGTGTaGTGGAGTCCAGGCTTAAACACAGCCTTGTCTTTTCCAGAGTCC +
Preference number: 1 (lower is better)
Translates to: ECTGWVANLDCRWQV*WSPGLNTALSFPES
Trigger: GGACTCTGGAAAAGACAAGGCTGTGTTTAAGCCTGGACTCCATCACACCTGCCACCTGCAGTCTAGGTTAGCTACCCACCCTGTACACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR TCA 90 bp AAGGGACTTGTGCTTCATGAAGCGGTGGTTGGAAGTGGTCCAGCCTaGCTTAGGGAGAGTAGCAGAAGGAACACTAACTTGCAACTCTGG +
Preference number: 1 (lower is better)
Translates to: KGLVLHEAVVGSGPA*LRESSRRNTNLQLW
Trigger: CCAGAGTTGCAAGTTAGTGTTCCTTCTGCTACTCTCCCTAAGTCAGGCTGGACCACTTCCAACCACCGCTTCATGAAGCACAAGTCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR TCA 90 bp AAGGCAACCTTTAACATGGTGAGTCCACATGCTCAACGGGTCTGTTaGCTGATGGGTAGATGGTTCAAGCTGCTTAGCAGGGCAAGCCTT +
Preference number: 1 (lower is better)
Translates to: KATFNMVSPHAQRVC*LMGRWFKLLSRASL
Trigger: AAGGCTTGCCCTGCTAAGCAGCTTGAACCATCTACCCATCAGTCAACAGACCCGTTGAGCATGTGGACTCACCATGTTAAAGGTTGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000555647.5
ENST00000557413.6
3UTR CCA 90 bp CCTGGAATCAATAGAAAGGAATGTCTGGGTTACAGTAAGGGGTTGTaGAGACCAAGGTTTTATGCAGATGAAGCCTCCAGCCAGCAGGCT +
Preference number: 1 (lower is better)
Translates to: PGINRKECLGYSKGL*RPRFYADEASSQQA
Trigger: AGCCTGCTGGCTGGAGGCTTCATCTGCATAAAACCTTGGTCTCCACAACCCCTTACTGTAACCCAGACATTCCTTTCTATTGATTCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR CCA 90 bp GGGAGGAGTGGGGGCATCTCATTTCATTTGGATTTGATAGCCTTGTaGACCAAGATGCTCAAGGTCAATACACATGAACAGGTGAGGGTT +
Preference number: 1 (lower is better)
Translates to: GRSGGISFHLDLIAL*TKMLKVNTHEQVRV
Trigger: AACCCTCACCTGTTCATGTGTATTGACCTTGAGCATCTTGGTCCACAAGGCTATCAAATCCAAATGAAATGAGATGCCCCCACTCCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR CCA 90 bp GGAGACATAAGATACCAGTCAGTACATGTAAGATGTACAGTGGTTTaGTCTGGAGAGGCAGGACAGCTCAAGACCTGGGGATGTTGTCAT +
Preference number: 1 (lower is better)
Translates to: GDIRYQSVHVRCTVV*SGEAGQLKTWGCCH
Trigger: ATGACAACATCCCCAGGTCTTGAGCTGTCCTGCCTCTCCAGACCAAACCACTGTACATCTTACATGTACTGACTGGTATCTTATGTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR CCA 90 bp AGATGTACAGTGGTTTGGTCTGGAGAGGCAGGACAGCTCAAGACCTaGGGATGTTGTCATAGGCAGAATCAAAGATTTTCTGATTGGCAA +
Preference number: 1 (lower is better)
Translates to: RCTVVWSGEAGQLKT*GCCHRQNQRFSDWQ
Trigger: TTGCCAATCAGAAAATCTTTGATTCTGCCTATGACAACATCCCCAGGTCTTGAGCTGTCCTGCCTCTCCAGACCAAACCACTGTACATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR CCA 90 bp GCATTATTTACCCCATTTTATCGAAAGGAGGTCGACTGTAAGAGCTaGGACCCACAGTATTCTAAACTCAGGGCCCAACAAAGTGTCAGA +
Preference number: 1 (lower is better)
Translates to: ALFTPFYRKEVDCKS*DPQYSKLRAQQSVR
Trigger: TCTGACACTTTGTTGGGCCCTGAGTTTAGAATACTGTGGGTCCCAGCTCTTACAGTCGACCTCCTTTCGATAAAATGGGGTAAATAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR-3UTR TCA 90 bp TCTGACAGTTGGGCCTTCAGAGCCAGGCACGTGGACCGTGTCAGAAGCGCCACCGCCCCGGTGACAGGGTaGACCCTGAGAGGAGCCCCC +
Preference number: 2 (lower is better)
Translates to: SDSWAFRARHVDRVRSATAPVTG*TLRGAP
Trigger: GGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGC...GGTGGCGCTTCTGACACGGTCCACGTGCCTGGCTCTGAAGGCCCAACTGTCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR-3UTR GCA 90 bp CCAGTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCCAGACCAGGCCAGCTaGTTCCGTCACCCGCTCTGC +
Preference number: 2 (lower is better)
Translates to: PVGAQQDRQCPPFLAQSPPDQAS*FRHPLC
Trigger: GCAGAGCGGGTGACGGAAGCAGCTGGCCTGGTCTGG...CGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCACTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
3UTR-3UTR GCA 90 bp AGTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTCCAGACCAGGCCAGCTaGTTCCGTCACCCGCTCTGC +
Preference number: 2 (lower is better)
Translates to: SGSPAGQTVPSIPRPKPAPDQAS*FRHPLC
Trigger: GCAGAGCGGGTGACGGAAGCAGCTGGCCTGGTCTGG...AGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
3UTR-3UTR GCA 90 bp GACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCCCAGACCAGGCCAGCTaGTTCCGTCACCCGCTCTGC +
Preference number: 2 (lower is better)
Translates to: DRQCPPFLAQSPLIEGQPPDQAS*FRHPLC
Trigger: GCAGAGCGGGTGACGGAAGCAGCTGGCCTGGTCTGG...GGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553789.5
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
3UTR-3UTR GCA 90 bp AGGAGCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGCCCCAGACCAGGCCAGCTaGTTCCGTCACCCGCTCTGC +
Preference number: 2 (lower is better)
Translates to: RSWPFLGGGHNSEAPVGAPDQAS*FRHPLC
Trigger: GCAGAGCGGGTGACGGAAGCAGCTGGCCTGGTCTGG...GGCTCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
3UTR-3UTR CCA 90 bp CAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGGCCAGCCCTGGGTTaGGTGTCAGGCAAGGAGGAG +
Preference number: 2 (lower is better)
Translates to: QTVPSIPRPKPADRGPALGPALG*VSGKEE
Trigger: CTCCTCCTTGCCTGACACCCAACCCAGGGCTGGCCC...CAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553789.5
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
3UTR-3UTR GCA 90 bp CGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGAGTTCCGTCACCCGCTCTaGCCTCTTACCCCACCAGCT +
Preference number: 2 (lower is better)
Translates to: RPKPADRGPALGWVSGKEFRHPL*PLTPPA
Trigger: AGCTGGTGGGGTAAGAGGGCAGAGCGGGTGACGGAA...CTCCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553315.1
3UTR-3UTR CCA 90 bp GGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGGGCCAGCCCTGGGTTaGGTGTCAGGCAAGGAGGAG +
Preference number: 2 (lower is better)
Translates to: GAQQDRQCPPFLAQSPLIGPALG*VSGKEE
Trigger: CTCCTCCTTGCCTGACACCCAACCCAGGGCTGGCCC...TATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
3UTR-3UTR CCA 90 bp CTCCCCACCATGAGTGAGGGGTCTGGTCTGACAGTTGGGCCTTCAGAGCCAGGCGGGCCAGCCCTGGGTTaGGTGTCAGGCAAGGAGGAG +
Preference number: 2 (lower is better)
Translates to: LPTMSEGSGLTVGPSEPGGPALG*VSGKEE
Trigger: CTCCTCCTTGCCTGACACCCAACCCAGGGCTGGCCC...GCCTGGCTCTGAAGGCCCAACTGTCAGACCAGACCCCTCACTCATGGTGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
3UTR-3UTR TCA 90 bp AGGTCGGTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTCTGGTTTGGGTCCACTaGGCCAGTGGATCAGTGTCC +
Preference number: 2 (lower is better)
Translates to: RSVPRPGDRVNPERSPQTLVWVH*ASGSVS
Trigger: GGACACTGATCCACTGGCTCAGTGGACCCAAACCAG...AGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGACCGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR-3UTR CCA 90 bp GACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCATAGAGGGCCAGCCCTaGGTTGGGTGTCAGGCAAGG +
Preference number: 2 (lower is better)
Translates to: DRQCPPFLAQSPLIEGQPIEGQP*VGCQAR
Trigger: CCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTAT...GGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553789.5
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
3UTR-3UTR CCA 90 bp TCCCCTGAGGCCCACATGGCATGCTGCTCACCACCAGCCCTGCGTCCTACTTCCGGAGCTGGCCCTTCCTaGGTGGTGGCCATAATTCTG +
Preference number: 2 (lower is better)
Translates to: SPEAHMACCSPPALRPTSGAGPS*VVAIIL
Trigger: CAGAATTATGGCCACCACCCAGGAAGGGCCAGCTCC...GGAAGTAGGACGCAGGGCTGGTGGTGAGCAGCATGCCATGTGGGCCTCAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR CAA 90 bp ACCACCAGCCCTGCGTCCTACTTCCTGGCAGCCCCAAGCTCGCTCTaGACTTCACTCTGGAGCTTCTACAGGGGAGCCTTCCAACCTGCC +
Preference number: 2 (lower is better)
Translates to: TTSPASYFLAAPSSL*TSLWSFYRGAFQPA
Trigger: GGCAGGTTGGAAGGCTCCCCTGTAGAAGCTCCAGAGTGAAGTCAAGAGCGAGCTTGGGGCTGCCAGGAAGTAGGACGCAGGGCTGGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR-3UTR GCA 90 bp TCTGACAGTTGGGCCTTCAGAGCCAGGCACGTGGACCGTGTCAGAAGCGCCACCAACAGATGGCATCCCTaGTTCTGGGCCTCCCCAGCT +
Preference number: 2 (lower is better)
Translates to: SDSWAFRARHVDRVRSATNRWHP*FWASPA
Trigger: AGCTGGGGAGGCCCAGAAGCAGGGATGCCATCTGTT...GGTGGCGCTTCTGACACGGTCCACGTGCCTGGCTCTGAAGGCCCAACTGTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR-3UTR GCA 90 bp AGGTCGGTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTTACCTCATCCCTCCCTaGACAACAGATGGCATCCCT +
Preference number: 2 (lower is better)
Translates to: RSVPRPGDRVNPERSPQTYLIPP*TTDGIP
Trigger: AGGGATGCCATCTGTTGTGCAGGGAGGGATGAGGTA...AGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGACCGACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR-3UTR CCA 90 bp TCTGACAGTTGGGCCTTCAGAGCCAGGCACGTGGACCGTGTCAGAAGCGCCACCTCCCTGCACAACAGATaGCATCCCTGCTTCTGGGCC +
Preference number: 2 (lower is better)
Translates to: SDSWAFRARHVDRVRSATSLHNR*HPCFWA
Trigger: GGCCCAGAAGCAGGGATGCCATCTGTTGTGCAGGGA...GGTGGCGCTTCTGACACGGTCCACGTGCCTGGCTCTGAAGGCCCAACTGTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR-3UTR GCA 90 bp CAGAGCAGGCTTTATTGGGGCCGTGTAAACCCCAGGGAGAGGCAGGACGTGGACAACAGATGGCATCCCTaGTTCTGGGCCTCCCCAGCT +
Preference number: 2 (lower is better)
Translates to: QSRLYWGRVNPRERQDVDNRWHP*FWASPA
Trigger: AGCTGGGGAGGCCCAGAAGCAGGGATGCCATCTGTT...GTCCACGTCCTGCCTCTCCCTGGGGTTTACACGGCCCCAATAAAGCCTGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR-3UTR CCA 90 bp TCCCCTGAGGCCCACATGGCATGCTGCTCACCACCAGCCCTGCGTCCTACTTCCGCCGTGGTCATTGCATaGAAGAAGCGAGAACACCGT +
Preference number: 2 (lower is better)
Translates to: SPEAHMACCSPPALRPTSAVVIA*KKREHR
Trigger: ACGGTGTTCTCGCTTCTTCCATGCAATGACCACGGC...GGAAGTAGGACGCAGGGCTGGTGGTGAGCAGCATGCCATGTGGGCCTCAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR-3UTR GCA 90 bp CCAAAAGGGCATGAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGCCAGACCAGGCCAGCTaGTTCCGTCACCCGCTCTGC +
Preference number: 2 (lower is better)
Translates to: PKGHEVTVGSDMVNSQGLPDQAS*FRHPLC
Trigger: GCAGAGCGGGTGACGGAAGCAGCTGGCCTGGTCTGG...CAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTCATGCCCTTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
3UTR-3UTR CCA 90 bp GGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCACGCCCTCCCTGCACAACAGATaGCATCCCTGCTTCTGGGCC +
Preference number: 2 (lower is better)
Translates to: GGAEGKTLVEISQVGPTPSLHNR*HPCFWA
Trigger: GGCCCAGAAGCAGGGATGCCATCTGTTGTGCAGGGA...GGGCGTGGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR-3UTR TCA 90 bp GGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCACGCCCCGGTGACAGGGGCTCAACGGGTCTGTTaGCTGATGGGTAGATGGTTC +
Preference number: 2 (lower is better)
Translates to: GQNSSGNFPGRSHAPVTGAQRVC*LMGRWF
Trigger: GAACCATCTACCCATCAGTCAACAGACCCGTTGAGC...CCCTGTCACCGGGGCGTGGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
3UTR-3UTR TCA 90 bp GAGCTTCTACAGGGGAGCCTTCCAACCTGCCCCAATGAGCCGTGGTCATTGCATGGCCTACTCGCTGTGTaGCTAAGAGGACTAGCCAGG +
Preference number: 2 (lower is better)
Translates to: ELLQGSLPTCPNEPWSLHGLLAV*LRGLAR
Trigger: CCTGGCTAGTCCTCTTAGTCACACAGCGAGTAGGCC...ATGCAATGACCACGGCTCATTGGGGCAGGTTGGAAGGCTCCCCTGTAGAAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR-3UTR GCA 90 bp CTCCCAAGTCTGAAATCACAAGATAGGGGGCATGGTCAGGAATCGGGGGTGGGGAACAGATGGCATCCCTaGTTCTGGGCCTCCCCAGCT +
Preference number: 2 (lower is better)
Translates to: LPSLKSQDRGHGQESGVGNRWHP*FWASPA
Trigger: AGCTGGGGAGGCCCAGAAGCAGGGATGCCATCTGTT...CCCCACCCCCGATTCCTGACCATGCCCCCTATCTTGTGATTTCAGACTTGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR-3UTR GCA 90 bp GGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCACGCCCGTCCTCATCCCTCCCTaGACAACAGATGGCATCCCT +
Preference number: 2 (lower is better)
Translates to: GGAEGKTLVEISQVGPTPVLIPP*TTDGIP
Trigger: AGGGATGCCATCTGTTGTGCAGGGAGGGATGAGGAC...GGGCGTGGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555009.5
3UTR CAA 90 bp GGCCAGCTGCTTCCGTCACCCGCTCTGCCCTCTTACCCCACCAGCTaGCTCCATTGGATGGTACTGAAAAAGGGATGGGACTTGAGTTTG +
Preference number: 2 (lower is better)
Translates to: GQLLPSPALPSYPTS*LHWMVLKKGWDLSL
Trigger: CAAACTCAAGTCCCATCCCTTTTTCAGTACCATCCAATGGAGCAAGCTGGTGGGGTAAGAGGGCAGAGCGGGTGACGGAAGCAGCTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553315.1
3UTR-3UTR CCA 90 bp GTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTCCTGATCCCACACAGGCCCACTaGGGAGGAGGACTCTTGATT +
Preference number: 2 (lower is better)
Translates to: VTVGSDMVNSQGLRGSPDPTQAH*GGGLLI
Trigger: AATCAAGAGTCCTCCTCCCCAGTGGGCCTGTGTGGG...ATCAGGACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR-3UTR CCA 90 bp AGTATAATGAGGAATGGCTGGCTCCCTCTTCCCACCATGGCCCGAACTAGCGTTTCAGAGCCAGGCACGTaGACCGTGTCAGAAGCGCCA +
Preference number: 2 (lower is better)
Translates to: SIMRNGWLPLPTMARTSVSEPGT*TVSEAP
Trigger: TGGCGCTTCTGACACGGTCCACGTGCCTGGCTCTGA...AACGCTAGTTCGGGCCATGGTGGGAAGAGGGAGCCAGCCATTCCTCATTATACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR CAA 90 bp CTTCTACAGGGGAGCCTTCCAACCTGCCCCAATGAGCCGTGGTCATaGCATGGAAGAAGCGAGAACACCGTAGGCCAGAGCAGGCTTTAT +
Preference number: 2 (lower is better)
Translates to: LLQGSLPTCPNEPWS*HGRSENTVGQSRLY
Trigger: ATAAAGCCTGCTCTGGCCTACGGTGTTCTCGCTTCTTCCATGCAATGACCACGGCTCATTGGGGCAGGTTGGAAGGCTCCCCTGTAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR CAA 90 bp GCTTCCGTCACCCGCTCTGCCCTCTTACCCCACCAGCTTGCTCCATaGGATGGTACTGAAAAAGGGATGGGACTTGAGTTTGCTGACACC +
Preference number: 2 (lower is better)
Translates to: ASVTRSALLPHQLAP*DGTEKGMGLEFADT
Trigger: GGTGTCAGCAAACTCAAGTCCCATCCCTTTTTCAGTACCATCCAATGGAGCAAGCTGGTGGGGTAAGAGGGCAGAGCGGGTGACGGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553315.1
3UTR-3UTR GCA 90 bp TCTGACAGTTGGGCCTTCAGAGCCAGGCACGTGGACCGTGTCAGAAGCGCCACCACACCTTGTCTAAACTaGTTTGGCCTGGAAGCTGAA +
Preference number: 2 (lower is better)
Translates to: SDSWAFRARHVDRVRSATTPCLN*FGLEAE
Trigger: TTCAGCTTCCAGGCCAAAGCAGTTTAGACAAGGTGT...GGTGGCGCTTCTGACACGGTCCACGTGCCTGGCTCTGAAGGCCCAACTGTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR-3UTR CCA 90 bp GAGCTTCTACAGGGGAGCCTTCCAACCTGCCCCAATGAGCCGTGGTCATTGCATACGAACAGCTTCTGGTaGAAGAGGCCTACTCGCTGT +
Preference number: 2 (lower is better)
Translates to: ELLQGSLPTCPNEPWSLHTNSFW*KRPTRC
Trigger: ACAGCGAGTAGGCCTCTTCCACCAGAAGCTGTTCGT...ATGCAATGACCACGGCTCATTGGGGCAGGTTGGAAGGCTCCCCTGTAGAAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR-3UTR CCA 90 bp TGCTGGCAGGGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTTGCACGAACAGCTTCTaGTGGAAGAGGCCTACTCGC +
Preference number: 2 (lower is better)
Translates to: CWQGGAEGKTLVEISQVGCTNSF*WKRPTR
Trigger: GCGAGTAGGCCTCTTCCACCAGAAGCTGTTCGTGCA...ACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCCCTGCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR-3UTR CCA 90 bp AGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTGCACGAACAGCTTCTaGTGGAAGAGGCCTACTCGC +
Preference number: 2 (lower is better)
Translates to: RGRTWTTESHVQAALSLVCTNSF*WKRPTR
Trigger: GCGAGTAGGCCTCTTCCACCAGAAGCTGTTCGTGCA...GACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR-3UTR CCA 90 bp CCAAAAGGGCATGAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGTCCCTGCACAACAGATaGCATCCCTGCTTCTGGGCC +
Preference number: 2 (lower is better)
Translates to: PKGHEVTVGSDMVNSQGLSLHNR*HPCFWA
Trigger: GGCCCAGAAGCAGGGATGCCATCTGTTGTGCAGGGA...CAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTCATGCCCTTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR-3UTR TCA 90 bp GAGCTTCTACAGGGGAGCCTTCCAACCTGCCCCAATGAGCCGTGGTCATTGCATAACGGGTCTGTTGACTaGTGGGTAGATGGTTCAAGC +
Preference number: 2 (lower is better)
Translates to: ELLQGSLPTCPNEPWSLHNGSVD*WVDGSS
Trigger: GCTTGAACCATCTACCCATCAGTCAACAGACCCGTT...ATGCAATGACCACGGCTCATTGGGGCAGGTTGGAAGGCTCCCCTGTAGAAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR-3UTR TCA 90 bp AGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCGGCACAACATGGCAGTaGGTGAGTCACAGAACCTCA +
Preference number: 2 (lower is better)
Translates to: RGRTWTTESHVQAALSLVGTTWQ*VSHRTS
Trigger: TGAGGTTCTGTGACTCACTCACTGCCATGTTGTGCC...GACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR-3UTR TCA 90 bp CGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTCTGGTTTGGGTCCACTaGGCCAGTGGATCAGTGTCC +
Preference number: 2 (lower is better)
Translates to: RGPQRVMYRLRFHLSSLSLVWVH*ASGSVS
Trigger: GGACACTGATCCACTGGCTCAGTGGACCCAAACCAG...AGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR-3UTR TCA 90 bp GACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTTCTCCCCACCATGAGTaGGGGGTCTGGTCTGACAGT +
Preference number: 2 (lower is better)
Translates to: DVDHRESCTGCAFTCLLCSPHHE*GVWSDS
Trigger: ACTGTCAGACCAGACCCCTCACTCATGGTGGGGAGA...ACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR-3UTR GCA 90 bp GAGCTTCTACAGGGGAGCCTTCCAACCTGCCCCAATGAGCCGTGGTCATTGCATGTAGATGGTTCAAGCTaGTTAGCAGGGCAAGCCTTG +
Preference number: 2 (lower is better)
Translates to: ELLQGSLPTCPNEPWSLHVDGSS*LAGQAL
Trigger: CAAGGCTTGCCCTGCTAAGCAGCTTGAACCATCTAC...ATGCAATGACCACGGCTCATTGGGGCAGGTTGGAAGGCTCCCCTGTAGAAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR-3UTR CCA 90 bp GGAGCCCCCAAACTGGAGGCAATTGTCTTTGAGGTAACCACTCACCCCAGCTTTTGCACGAACAGCTTCTaGTGGAAGAGGCCTACTCGC +
Preference number: 2 (lower is better)
Translates to: GAPKLEAIVFEVTTHPSFCTNSF*WKRPTR
Trigger: GCGAGTAGGCCTCTTCCACCAGAAGCTGTTCGTGCA...AAAGCTGGGGTGAGTGGTTACCTCAAAGACAATTGCCTCCAGTTTGGGGGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR-3UTR TCA 90 bp TGCTGGCAGGGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCAACATGGCAGTGAGTaGGTCACAGAACCTCACAGT +
Preference number: 2 (lower is better)
Translates to: CWQGGAEGKTLVEISQVGQHGSE*VTEPHS
Trigger: ACTGTGAGGTTCTGTGACTCACTCACTGCCATGTTG...ACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCCCTGCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR-3UTR TCA 90 bp GTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTCCTGATAGTGGATCAGTGTCCTaGGATGAGTCTCCAGAGATG +
Preference number: 2 (lower is better)
Translates to: VTVGSDMVNSQGLRGSPDSGSVS*DESPEM
Trigger: CATCTCTGGAGACTCATCTCAGGACACTGATCCACT...ATCAGGACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR-3UTR TCA 90 bp TGCTGGCAGGGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTAGTGGATCAGTGTCCTaGGATGAGTCTCCAGAGATG +
Preference number: 2 (lower is better)
Translates to: CWQGGAEGKTLVEISQVGSGSVS*DESPEM
Trigger: CATCTCTGGAGACTCATCTCAGGACACTGATCCACT...ACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCCCTGCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR-3UTR TCA 90 bp GTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTCCTGATTTGCTCTCCCAAGTCTaGAATCACAAGATAGGGGGC +
Preference number: 2 (lower is better)
Translates to: VTVGSDMVNSQGLRGSPDLLSQV*NHKIGG
Trigger: GCCCCCTATCTTGTGATTTCAGACTTGGGAGAGCAA...ATCAGGACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR-3UTR GCA 90 bp TGCCCCAATGAGCCGTGGTCATTGCATGGAAGAAGCGAGAACACCGTAGGCCAGTCTTCCCCTCCCTTTTaGTCTCCCAAGTCTGAAATC +
Preference number: 2 (lower is better)
Translates to: CPNEPWSLHGRSENTVGQSSPPF*SPKSEI
Trigger: GATTTCAGACTTGGGAGAGCAAAAGGGAGGGGAAGA...CTGGCCTACGGTGTTCTCGCTTCTTCCATGCAATGACCACGGCTCATTGGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR-3UTR GCA 90 bp GAGCTTCTACAGGGGAGCCTTCCAACCTGCCCCAATGAGCCGTGGTCATTGCATGAGTCATGTACAGGCTaGGCTTTCACTTGTCTTCTC +
Preference number: 2 (lower is better)
Translates to: ELLQGSLPTCPNEPWSLHESCTG*AFTCLL
Trigger: GAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTC...ATGCAATGACCACGGCTCATTGGGGCAGGTTGGAAGGCTCCCCTGTAGAAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR-3UTR CCA 90 bp AGTATAATGAGGAATGGCTGGCTCCCTCTTCCCACCATGGCCCGAACTAGCGTTTGCCCCAATGAGCCGTaGTCATTGCATGGAAGAAGC +
Preference number: 2 (lower is better)
Translates to: SIMRNGWLPLPTMARTSVCPNEP*SLHGRS
Trigger: GCTTCTTCCATGCAATGACCACGGCTCATTGGGGCA...AACGCTAGTTCGGGCCATGGTGGGAAGAGGGAGCCAGCCATTCCTCATTATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR-3UTR TCA 90 bp GGAGCCCCCAAACTGGAGGCAATTGTCTTTGAGGTAACCACTCACCCCAGCTTTTTGCTCTCCCAAGTCTaGAATCACAAGATAGGGGGC +
Preference number: 2 (lower is better)
Translates to: GAPKLEAIVFEVTTHPSFLLSQV*NHKIGG
Trigger: GCCCCCTATCTTGTGATTTCAGACTTGGGAGAGCAA...AAAGCTGGGGTGAGTGGTTACCTCAAAGACAATTGCCTCCAGTTTGGGGGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR-3UTR TCA 90 bp CCCACCTTCCTTGAGCCTGTCAAGCCATACTCTAGAATAGAGAATTTGGGGTCATCCAACCTGCCCCAATaGGCCGTGGTCATTGCATGG +
Preference number: 2 (lower is better)
Translates to: PTFLEPVKPYSRIENLGSSNLPQ*AVVIAW
Trigger: CCATGCAATGACCACGGCTCATTGGGGCAGGTTGGA...TGACCCCAAATTCTCTATTCTAGAGTATGGCTTGACAGGCTCAAGGAAGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR-3UTR CCA 90 bp CCATGCGTTTTGTGGTTTCTTATCCCAAAAGGGCATGAAGTCACAGTAGGCAGTATAGAGGGCCAGCCCTaGGTTGGGTGTCAGGCAAGG +
Preference number: 2 (lower is better)
Translates to: PCVLWFLIPKGHEVTVGSIEGQP*VGCQAR
Trigger: CCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTAT...ACTGCCTACTGTGACTTCATGCCCTTTTGGGATAAGAAACCACAAAACGCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
3UTR-3UTR TCA 90 bp GAGTGGGGGCATCTCATTTCATTTGGATTTGATAGCCTTGTGGACCAAGATGCTCTGGCAGGGAGGAGCTaGGGGCAAAACTCTAGTGGA +
Preference number: 2 (lower is better)
Translates to: EWGHLISFGFDSLVDQDALAGRS*GQNSSG
Trigger: TCCACTAGAGTTTTGCCCTCAGCTCCTCCCTGCCAG...AGCATCTTGGTCCACAAGGCTATCAAATCCAAATGAAATGAGATGCCCCCACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR-3UTR TCA 90 bp GAGTGGGGGCATCTCATTTCATTTGGATTTGATAGCCTTGTGGACCAAGATGCTTCTCCCCACCATGAGTaGGGGGTCTGGTCTGACAGT +
Preference number: 2 (lower is better)
Translates to: EWGHLISFGFDSLVDQDASPHHE*GVWSDS
Trigger: ACTGTCAGACCAGACCCCTCACTCATGGTGGGGAGA...AGCATCTTGGTCCACAAGGCTATCAAATCCAAATGAAATGAGATGCCCCCACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR-3UTR GCA 90 bp AGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTCAGTCTCCTGACAGCTCAGCGCCAGTaGCACAGAAGGCAACCTTTA +
Preference number: 2 (lower is better)
Translates to: RESCTGCAFTCLLCLSLLTAQRQ*HRRQPL
Trigger: TAAAGGTTGCCTTCTGTGGCACTGGCGCTGAGCTGT...CAGGAGACTGAGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR-3UTR GCA 90 bp GACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTCAGTAACCTCACAGTAGGGTaGAGCAGGTGGTCAACAGCT +
Preference number: 2 (lower is better)
Translates to: DHRESCTGCAFTCLLCLSNLTVG*SRWSTA
Trigger: AGCTGTTGACCACCTGCTGCACCCTACTGTGAGGTT...ACTGAGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR-3UTR GCA 90 bp GAGTGGGGGCATCTCATTTCATTTGGATTTGATAGCCTTGTGGACCAAGATGCTAACAGATGGCATCCCTaGTTCTGGGCCTCCCCAGCT +
Preference number: 2 (lower is better)
Translates to: EWGHLISFGFDSLVDQDANRWHP*FWASPA
Trigger: AGCTGGGGAGGCCCAGAAGCAGGGATGCCATCTGTT...AGCATCTTGGTCCACAAGGCTATCAAATCCAAATGAAATGAGATGCCCCCACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR-3UTR CCA 90 bp TGGCAGGGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCGTTCCATGCGTTTTGTaGTTTCTTATCCCAAAAGGG +
Preference number: 2 (lower is better)
Translates to: WQGGAEGKTLVEISQVGPVPCVL*FLIPKG
Trigger: CCCTTTTGGGATAAGAAACCACAAAACGCATGGAAC...GGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCCCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR-3UTR TCA 90 bp GACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTCAGTCAACATGGCAGTGAGTaGGTCACAGAACCTCACAGT +
Preference number: 2 (lower is better)
Translates to: DHRESCTGCAFTCLLCLSQHGSE*VTEPHS
Trigger: ACTGTGAGGTTCTGTGACTCACTCACTGCCATGTTG...ACTGAGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR-3UTR TCA 90 bp CTCTTAGGAGATCCTGAGAACATGTGTCCAGGGTCGTCTGGCTACAACTTAGTTGGGGAGGAGGACTCTTaGTTCTGGTTTCAGACTTGC +
Preference number: 2 (lower is better)
Translates to: LLGDPENMCPGSSGYNLVGEEDS*FWFQTC
Trigger: GCAAGTCTGAAACCAGAATCAAGAGTCCTCCTCCCC...AACTAAGTTGTAGCCAGACGACCCTGGACACATGTTCTCAGGATCTCCTAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR-3UTR CCA 90 bp AGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCGTTCCATGCGTTTTGTaGTTTCTTATCCCAAAAGGG +
Preference number: 2 (lower is better)
Translates to: RGRTWTTESHVQAALSLVVPCVL*FLIPKG
Trigger: CCCTTTTGGGATAAGAAACCACAAAACGCATGGAAC...GACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR-3UTR CCA 90 bp CCCACCTTCCTTGAGCCTGTCAAGCCATACTCTAGAATAGAGAATTTGGGGTCACGTGAGTGTACAGGGTaGGTAGCTAACCTAGACTGC +
Preference number: 2 (lower is better)
Translates to: PTFLEPVKPYSRIENLGSRECTG*VANLDC
Trigger: GCAGTCTAGGTTAGCTACCCACCCTGTACACTCACG...TGACCCCAAATTCTCTATTCTAGAGTATGGCTTGACAGGCTCAAGGAAGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR CAA 90 bp GGGAGACATAAGATACCAGTCAGTACATGTAAGATGTACAGTGGTTaGGTCTGGAGAGGCAGGACAGCTCAAGACCTGGGGATGTTGTCA +
Preference number: 2 (lower is better)
Translates to: GRHKIPVSTCKMYSG*VWRGRTAQDLGMLS
Trigger: TGACAACATCCCCAGGTCTTGAGCTGTCCTGCCTCTCCAGACCAAACCACTGTACATCTTACATGTACTGACTGGTATCTTATGTCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR-3UTR GCA 90 bp TGGCAGGGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCTGGATAGTTGTTCCATaGGTTTTGTGGTTTCTTATC +
Preference number: 2 (lower is better)
Translates to: WQGGAEGKTLVEISQVGPWIVVP*VLWFLI
Trigger: GATAAGAAACCACAAAACGCATGGAACAACTATCCA...GGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCCCTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR-3UTR GCA 90 bp CCCACCTTCCTTGAGCCTGTCAAGCCATACTCTAGAATAGAGAATTTGGGGTCATCCAGAAGGGACTTGTaGTTCATGAAGCGGTGGTTG +
Preference number: 2 (lower is better)
Translates to: PTFLEPVKPYSRIENLGSSRRDL*FMKRWL
Trigger: CAACCACCGCTTCATGAAGCACAAGTCCCTTCTGGA...TGACCCCAAATTCTCTATTCTAGAGTATGGCTTGACAGGCTCAAGGAAGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR-3UTR CCA 90 bp GTCCTTAACCTTTTTGAGCTTCAGTTTTCTCAGGAGCTACCGTCTGTTGCAAGGGAGGAGCCCCCAAACTaGAGGCAATTGTCTTTGAGG +
Preference number: 2 (lower is better)
Translates to: VLNLFELQFSQELPSVAREEPPN*RQLSLR
Trigger: CCTCAAAGACAATTGCCTCCAGTTTGGGGGCTCCTC...CCTTGCAACAGACGGTAGCTCCTGAGAAAACTGAAGCTCAAAAAGGTTAAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR-3UTR CCA 90 bp GAGTGGGGGCATCTCATTTCATTTGGATTTGATAGCCTTGTGGACCAAGATGCTGTCACAGGAGGGAAGTaGGTCCCAGAGAGTAGAACT +
Preference number: 2 (lower is better)
Translates to: EWGHLISFGFDSLVDQDAVTGGK*VPESRT
Trigger: AGTTCTACTCTCTGGGACCCACTTCCCTCCTGTGAC...AGCATCTTGGTCCACAAGGCTATCAAATCCAAATGAAATGAGATGCCCCCACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR CAA 90 bp AGACCTGGAATCAATAGAAAGGAATGTCTGGGTTACAGTAAGGGGTaGTGGAGACCAAGGTTTTATGCAGATGAAGCCTCCAGCCAGCAG +
Preference number: 2 (lower is better)
Translates to: RPGINRKECLGYSKG*WRPRFYADEASSQQ
Trigger: CTGCTGGCTGGAGGCTTCATCTGCATAAAACCTTGGTCTCCACAACCCCTTACTGTAACCCAGACATTCCTTTCTATTGATTCCAGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR-3UTR TCA 90 bp TACATTTTAGGGAGACATAAGATACCAGTCAGTACATGTAAGATGTACAGTGGTGGAAGTGGTCCAGCCTaGCTTAGGGAGAGTAGCAGA +
Preference number: 2 (lower is better)
Translates to: YILGRHKIPVSTCKMYSGGSGPA*LRESSR
Trigger: TCTGCTACTCTCCCTAAGTCAGGCTGGACCACTTCC...ACCACTGTACATCTTACATGTACTGACTGGTATCTTATGTCTCCCTAAAATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR-3UTR CCA 90 bp TACATTTTAGGGAGACATAAGATACCAGTCAGTACATGTAAGATGTACAGTGGTGCCGTGGTCATTGCATaGAAGAAGCGAGAACACCGT +
Preference number: 2 (lower is better)
Translates to: YILGRHKIPVSTCKMYSGAVVIA*KKREHR
Trigger: ACGGTGTTCTCGCTTCTTCCATGCAATGACCACGGC...ACCACTGTACATCTTACATGTACTGACTGGTATCTTATGTCTCCCTAAAATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR-3UTR CAA 90 bp TCCCCTGAGGCCCACATGGCATGCTGCTCACCACCAGCCCTGCGTCCTACTTCCGGCCTGGAAGCTGAATaGCTGTCCTCTTGCACCCCT +
Preference number: 3 (lower is better)
Translates to: SPEAHMACCSPPALRPTSGLEAE*LSSCTP
Trigger: AGGGGTGCAAGAGGACAGCAATTCAGCTTCCAGGCC...GGAAGTAGGACGCAGGGCTGGTGGTGAGCAGCATGCCATGTGGGCCTCAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR GCA 72 bp GATCCAGACCAGGCCAGCTGCTTCCGTCACCCGCTCTaGCCTCTTACCCCACCAGCTTGCTCCATTGGATGG +
Preference number: 3 (lower is better)
Translates to: DPDQASCFRHPL*PLTPPACSIGW
Trigger: CCATCCAATGGAGCAAGCTGGTGGGGTAAGAGGGCAGAGCGGGTGACGGAAGCAGCTGGCCTGGTCTGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553315.1
3UTR CCA 72 bp GCCTTGACTGCCCCCACCTCCAGCTTTTCCAGGAGCTaGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCC +
Preference number: 3 (lower is better)
Translates to: ALTAPTSSFSRS*PFLGGGHNSEA
Trigger: GGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGCTCCTGGAAAAGCTGGAGGTGGGGGCAGTCAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000555647.5
ENST00000557413.6
3UTR CCA 72 bp TCTGGTCTGACAGTTGGGCCTTCAGAGCCAGGCACGTaGACCGTGTCAGAAGCGCCACCTGGTGGTGACTGG +
Preference number: 3 (lower is better)
Translates to: SGLTVGPSEPGT*TVSEAPPGGDW
Trigger: CCAGTCACCACCAGGTGGCGCTTCTGACACGGTCCACGTGCCTGGCTCTGAAGGCCCAACTGTCAGACCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR-3UTR CAA 90 bp GGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCACGCCCCCAGGACAGTCTGGTTaGGGTCCACTGAGCCAGTGG +
Preference number: 3 (lower is better)
Translates to: GGAEGKTLVEISQVGPTPPGQSG*GPLSQW
Trigger: CCACTGGCTCAGTGGACCCAAACCAGACTGTCCTGG...GGGCGTGGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR TCA 72 bp GAAGAGCCCGAGGAAGTCAAGTCTCCCCACCATGAGTaGGGGGTCTGGTCTGACAGTTGGGCCTTCAGAGCC +
Preference number: 3 (lower is better)
Translates to: EEPEEVKSPHHE*GVWSDSWAFRA
Trigger: GGCTCTGAAGGCCCAACTGTCAGACCAGACCCCTCACTCATGGTGGGGAGACTTGACTTCCTCGGGCTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR TCA 72 bp CTGCGTCCTACTTCCTGGCAGCCCCAAGCTCGCTCTTaGCTTCACTCTGGAGCTTCTACAGGGGAGCCTTCC +
Preference number: 3 (lower is better)
Translates to: LRPTSWQPQARS*LHSGASTGEPS
Trigger: GGAAGGCTCCCCTGTAGAAGCTCCAGAGTGAAGTCAAGAGCGAGCTTGGGGCTGCCAGGAAGTAGGACGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR GCA 72 bp CTACCTCATCCCTCCCTGCACAACAGATGGCATCCCTaGTTCTGGGCCTCCCCAGCTGCACGAACAGCTTCT +
Preference number: 3 (lower is better)
Translates to: LPHPSLHNRWHP*FWASPAARTAS
Trigger: AGAAGCTGTTCGTGCAGCTGGGGAGGCCCAGAAGCAGGGATGCCATCTGTTGTGCAGGGAGGGATGAGGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR GCA 72 bp AGTCCTCATCCCTCCCTGCACAACAGATGGCATCCCTaGTTCTGGGCCTCCCCAGCTGCACGAACAGCTTCT +
Preference number: 3 (lower is better)
Translates to: SPHPSLHNRWHP*FWASPAARTAS
Trigger: AGAAGCTGTTCGTGCAGCTGGGGAGGCCCAGAAGCAGGGATGCCATCTGTTGTGCAGGGAGGGATGAGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555009.5
3UTR GCA 72 bp ATGGCAGTGAGTGAGTCACAGAACCTCACAGTAGGGTaGAGCAGGTGGTCAACAGCTCAGCGCCAGTGCCAC +
Preference number: 3 (lower is better)
Translates to: MAVSESQNLTVG*SRWSTAQRQCH
Trigger: GTGGCACTGGCGCTGAGCTGTTGACCACCTGCTGCACCCTACTGTGAGGTTCTGTGACTCACTCACTGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR CCA 72 bp CTTCTGGGCCTCCCCAGCTGCACGAACAGCTTCTGGTaGAAGAGGCCTACTCGCTGTGTGACTAAGAGGACT +
Preference number: 3 (lower is better)
Translates to: LLGLPSCTNSFW*KRPTRCVTKRT
Trigger: AGTCCTCTTAGTCACACAGCGAGTAGGCCTCTTCCACCAGAAGCTGTTCGTGCAGCTGGGGAGGCCCAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR CCA 72 bp CTACAGGGGAGCCTTCCAACCTGCCCCAATGAGCCGTaGTCATTGCATGGAAGAAGCGAGAACACCGTAGGC +
Preference number: 3 (lower is better)
Translates to: LQGSLPTCPNEP*SLHGRSENTVG
Trigger: GCCTACGGTGTTCTCGCTTCTTCCATGCAATGACCACGGCTCATTGGGGCAGGTTGGAAGGCTCCCCTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR-3UTR CAA 90 bp AGTATAATGAGGAATGGCTGGCTCCCTCTTCCCACCATGGCCCGAACTAGCGTTCCAGGACAGTCTGGTTaGGGTCCACTGAGCCAGTGG +
Preference number: 3 (lower is better)
Translates to: SIMRNGWLPLPTMARTSVPGQSG*GPLSQW
Trigger: CCACTGGCTCAGTGGACCCAAACCAGACTGTCCTGG...AACGCTAGTTCGGGCCATGGTGGGAAGAGGGAGCCAGCCATTCCTCATTATACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR TCA 72 bp GGAGCTTCTACAGGGGAGCCTTCCAACCTGCCCCAATaGGCCGTGGTCATTGCATGGAAGAAGCGAGAACAC +
Preference number: 3 (lower is better)
Translates to: GASTGEPSNLPQ*AVVIAWKKREH
Trigger: GTGTTCTCGCTTCTTCCATGCAATGACCACGGCTCATTGGGGCAGGTTGGAAGGCTCCCCTGTAGAAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR-3UTR CAA 90 bp AGTATAATGAGGAATGGCTGGCTCCCTCTTCCCACCATGGCCCGAACTAGCGTTAGGAGCTACCGTCTGTaGCAAGGGGTCACTGTGAGG +
Preference number: 3 (lower is better)
Translates to: SIMRNGWLPLPTMARTSVRSYRL*QGVTVR
Trigger: CCTCACAGTGACCCCTTGCAACAGACGGTAGCTCCT...AACGCTAGTTCGGGCCATGGTGGGAAGAGGGAGCCAGCCATTCCTCATTATACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR TCA 72 bp AGAGATGTCCTGAGTGGGGCACAACATGGCAGTGAGTaGGTCACAGAACCTCACAGTAGGGTGCAGCAGGTG +
Preference number: 3 (lower is better)
Translates to: RDVLSGAQHGSE*VTEPHSRVQQV
Trigger: CACCTGCTGCACCCTACTGTGAGGTTCTGTGACTCACTCACTGCCATGTTGTGCCCCACTCAGGACATCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR TCA 72 bp CGAACAGCTTCTGGTGGAAGAGGCCTACTCGCTGTGTaGCTAAGAGGACTAGCCAGGACAGTCTGGTTTGGG +
Preference number: 3 (lower is better)
Translates to: RTASGGRGLLAV*LRGLARTVWFG
Trigger: CCCAAACCAGACTGTCCTGGCTAGTCCTCTTAGTCACACAGCGAGTAGGCCTCTTCCACCAGAAGCTGTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR GCA 72 bp TTCACTCTGGAGCTTCTACAGGGGAGCCTTCCAACCTaGCCCAATGAGCCGTGGTCATTGCATGGAAGAAGC +
Preference number: 3 (lower is better)
Translates to: FTLELLQGSLPT*PNEPWSLHGRS
Trigger: GCTTCTTCCATGCAATGACCACGGCTCATTGGGGCAGGTTGGAAGGCTCCCCTGTAGAAGCTCCAGAGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR GCA 72 bp AGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTaGGCTTTCACTTGTCTTCTCTGTCTCAGTCTCCTG +
Preference number: 3 (lower is better)
Translates to: RQDVDHRESCTG*AFTCLLCLSLL
Trigger: CAGGAGACTGAGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR CCA 72 bp CCAGTCAGTACATGTAAGATGTACAGTGGTTTGGTCTaGAGAGGCAGGACAGCTCAAGACCTGGGGATGTTG +
Preference number: 3 (lower is better)
Translates to: PVSTCKMYSGLV*RGRTAQDLGML
Trigger: CAACATCCCCAGGTCTTGAGCTGTCCTGCCTCTCCAGACCAAACCACTGTACATCTTACATGTACTGACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR-3UTR CAA 90 bp CCCACCTTCCTTGAGCCTGTCAAGCCATACTCTAGAATAGAGAATTTGGGGTCAAATGAGCCGTGGTCATaGCATGGAAGAAGCGAGAAC +
Preference number: 3 (lower is better)
Translates to: PTFLEPVKPYSRIENLGSNEPWS*HGRSEN
Trigger: GTTCTCGCTTCTTCCATGCAATGACCACGGCTCATT...TGACCCCAAATTCTCTATTCTAGAGTATGGCTTGACAGGCTCAAGGAAGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR TCA 72 bp GCCCAACAAAGTGTCAGATGTGTAGCTTTGGGTGGATaGAGCACAGAAGTTCCAGAAGGGACTTGTGCTTCA +
Preference number: 3 (lower is better)
Translates to: AQQSVRCVALGG*STEVPEGTCAS
Trigger: TGAAGCACAAGTCCCTTCTGGAACTTCTGTGCTTCATCCACCCAAAGCTACACATCTGACACTTTGTTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR CCA 72 bp ACCCCATTTTATCGAAAGGAGGTCGACTGTAAGAGCTaGGACCCACAGTATTCTAAACTCAGGGCCCAACAA +
Preference number: 3 (lower is better)
Translates to: TPFYRKEVDCKS*DPQYSKLRAQQ
Trigger: TTGTTGGGCCCTGAGTTTAGAATACTGTGGGTCCCAGCTCTTACAGTCGACCTCCTTTCGATAAAATGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR CCA 72 bp ACCCCAGCTTTTCAGAGACCAGAGGCAAGACATTTCTaGCTAAGAGCCATGGATAGTTGTTCCATGCGTTTT +
Preference number: 3 (lower is better)
Translates to: TPAFQRPEARHF*LRAMDSCSMRF
Trigger: AAAACGCATGGAACAACTATCCATGGCTCTTAGCCAGAAATGTCTTGCCTCTGGTCTCTGAAAAGCTGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
3UTR CCA 72 bp AGGGAGAGTAGCAGAAGGAACACTAACTTGCAACTCTaGCTAGGTTGTGTCCTTAACCTTTTTGAGCTTCAG +
Preference number: 3 (lower is better)
Translates to: RESSRRNTNLQL*LGCVLNLFELQ
Trigger: CTGAAGCTCAAAAAGGTTAAGGACACAACCTAGCCAGAGTTGCAAGTTAGTGTTCCTTCTGCTACTCTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR CCA 72 bp GGGGGCATCTCATTTCATTTGGATTTGATAGCCTTGTaGACCAAGATGCTCAAGGTCAATACACATGAACAG +
Preference number: 3 (lower is better)
Translates to: GGISFHLDLIAL*TKMLKVNTHEQ
Trigger: CTGTTCATGTGTATTGACCTTGAGCATCTTGGTCCACAAGGCTATCAAATCCAAATGAAATGAGATGCCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR TCA 72 bp TTTGAAGAGATTTATTCTGAGCCAAGTGTGAGTGACTaGTGGCCTGTGATACAACTCTTAGGAGATCCTGAG +
Preference number: 3 (lower is better)
Translates to: FEEIYSEPSVSD*WPVIQLLGDPE
Trigger: CTCAGGATCTCCTAAGAGTTGTATCACAGGCCATCAGTCACTCACACTTGGCTCAGAATAAATCTCTTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp TTTCCCAGGTCGGTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCGCACCGCGCTGGGGCTaGCTCCACTGCTCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: FPRSVPRPGDRVNPERSPAPRWG*LHCSAA
Trigger: GGCCGCTGAGCAGTGGAGCCAGCCCCAGCGCGGTGC...GGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGACCGACCTGGGAAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555009.5
CDS-3UTR TCA 90 bp CCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGAGGCCGCTGGGCGACTaGGCCACTCGGGCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: PRPKPADRGPALGWVSGKRPLGD*ATRAAG
Trigger: TCCAGCTGCCCGAGTGGCTCAGTCGCCCAGCGGCCT...CTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553789.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp TGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGAGGCCGCTGGGCGACTaGGCCACTCGGGCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: CPPFLAQSPLIEGQPWVGRPLGD*ATRAAG
Trigger: TCCAGCTGCCCGAGTGGCTCAGTCGCCCAGCGGCCT...CCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553789.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGAGAGGCCGCTGGGCGACTaGGCCACTCGGGCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: RPKPADRGPALGWVSGKERPLGD*ATRAAG
Trigger: TCCAGCTGCCCGAGTGGCTCAGTCGCCCAGCGGCCT...CTCCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553789.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTGGAGGCAGCACCCCCTGCTCGTaGAGCGCCTCCAGCGCTACC +
Preference number: 4 (lower is better)
Translates to: VPRPGDRVNPERSPQTGGSTPCS*SASSAT
Trigger: GGTAGCGCTGGAGGCGCTGCACGAGCAGGGGGTGCT...GCCTCCAGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp TTTCCCAGGTCGGTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCAGCCACTCGGGCAGCTaGAGCTGGGTGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: FPRSVPRPGDRVNPERSPSHSGS*SWVWAW
Trigger: CCAGGCCCACACCCAGCTCCAGCTGCCCGAGTGGCT...GGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGACCGACCTGGGAAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGAGGCCGCTGGGCGACTaGGCCACTCGGGCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: QTVPSIPRPKPADRGPALRPLGD*ATRAAG
Trigger: TCCAGCTGCCCGAGTGGCTCAGTCGCCCAGCGGCCT...CAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553789.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CCCAGTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCTGGGGCTGGCTCCACTaGTCAGCGGCCGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: PSGSPAGQTVPSIPRPKPWGWLH*SAAAAG
Trigger: ACCTGCAGCGGCCGCTGAGCAGTGGAGCCAGCCCCA...GGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCACTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CCCAGTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCAGCACCCCCTGCTCGTaGAGCGCCTCCAGCGCTACC +
Preference number: 4 (lower is better)
Translates to: PSGSPAGQTVPSIPRPKPSTPCS*SASSAT
Trigger: GGTAGCGCTGGAGGCGCTGCACGAGCAGGGGGTGCT...GGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCACTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTGGAGGCGGCTCATGGCTGCCCTaGAGCTGGGACCCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: VPRPGDRVNPERSPQTGGGSWLP*SWDPLG
Trigger: CCCCAAAGGGTCCCAGCTGCAGGGCAGCCATGAGCC...GCCTCCAGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555647.5
CDS-3UTR CCA 90 bp GACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCGCTCCAGGCCGGGGCTaGGCAGGCACTCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: DRQCPPFLAQSPLIEGQPAPGRG*AGTHRP
Trigger: TGGCCTGTGAGTGCCTGCCCAGCCCCGGCCTGGAGC...GGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGCCCAGCCTCTCACACTCCAGGTaGCCCTGCCACAGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: AGPSWVVAIILRPQWEPSLSHSR*PCHSPG
Trigger: GCCGGGGCTGTGGCAGGGCCACCTGGAGTGTGAGAG...GCTGGGCTCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GCCCCAGTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCAGCAGGTTCCCGGGGTaGAGGTCCCGGCACAGCACC +
Preference number: 4 (lower is better)
Translates to: APVGAQQDRQCPPFLAQSSRFPG*RSRHST
Trigger: GGTGCTGTGCCGGGACCTCCACCCCGGGAACCTGCT...GCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCACTGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGGCCTCCCCGCAGCACTaGGGCTCCACCTCTGACCAC +
Preference number: 4 (lower is better)
Translates to: PSIPRPKPADRGPALGWVASPQH*GSTSDH
Trigger: GTGGTCAGAGGTGGAGCCCCAGTGCTGCGGGGAGGC...CACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553789.5
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp TGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGAGCCACTCGGGCAGCTaGAGCTGGGTGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: CPPFLAQSPLIEGQPWVGSHSGS*SWVWAW
Trigger: CCAGGCCCACACCCAGCTCCAGCTGCCCGAGTGGCT...CCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553789.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGAGCCACTCGGGCAGCTaGAGCTGGGTGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PRPKPADRGPALGWVSGKSHSGS*SWVWAW
Trigger: CCAGGCCCACACCCAGCTCCAGCTGCCCGAGTGGCT...CTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553789.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GCCCCAGTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCAGCAGAGAGGCCGCTaGGCGACTGAGCCACTCGGG +
Preference number: 4 (lower is better)
Translates to: APVGAQQDRQCPPFLAQSQQRGR*ATEPLG
Trigger: CCCGAGTGGCTCAGTCGCCCAGCGGCCTCTCTGCTG...GCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCACTGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGCAGCAGAGAGGCCGCTaGGCGACTGAGCCACTCGGG +
Preference number: 4 (lower is better)
Translates to: PSIPRPKPADRGPALGWVQQRGR*ATEPLG
Trigger: CCCGAGTGGCTCAGTCGCCCAGCGGCCTCTCTGCTG...CACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553789.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CTCCCCACCATGAGTGAGGGGTCTGGTCTGACAGTTGGGCCTTCAGAGCCAGGCGGAGCCTCAGGCTGCTaGAACCCGCGCTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LPTMSEGSGLTVGPSEPGGASGC*NPRWGW
Trigger: CCAGCCCCAGCGCGGGTTTCAGCAGCCTGAGGCTCC...GCCTGGCTCTGAAGGCCCAACTGTCAGACCAGACCCCTCACTCATGGTGGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTGGAGGCCCAGCCCTCCTAGCTTaGAGGTGCAGGTGGCCACCT +
Preference number: 4 (lower is better)
Translates to: VPRPGDRVNPERSPQTGGPALLA*RCRWPP
Trigger: AGGTGGCCACCTGCACCTTCAAGCTAGGAGGGCTGG...GCCTCCAGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGAGGGGGCCCAGCGTCTaGGTTCTGGCCAGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: PFLAQSPLIEGQPWVGCQRGPSV*VLASPP
Trigger: AGGAGGGCTGGCCAGAACTCAGACGCTGGGCCCCCT...CTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp TCTGACAGTTGGGCCTTCAGAGCCAGGCACGTGGACCGTGTCAGAAGCGCCACCCCTCAGGAACCCAAGTaGGCCCCCGAGGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: SDSWAFRARHVDRVRSATPQEPK*APEGAQ
Trigger: CTGGGCCCCCTCGGGGGCTCACTTGGGTTCCTGAGG...GGTGGCGCTTCTGACACGGTCCACGTGCCTGGCTCTGAAGGCCCAACTGTCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp TCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCACCTCAGGAACCCAAGTaGGCCCCCGAGGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: SIPRPKPADRGPALGWVSPQEPK*APEGAQ
Trigger: CTGGGCCCCCTCGGGGGCTCACTTGGGTTCCTGAGG...TGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp TTTCCCAGGTCGGTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCGTGGGCCTGGATTCCTaGAGGGTGGCTCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: FPRSVPRPGDRVNPERSPVGLDS*RVALGQ
Trigger: CTGTCCCAGAGCCACCCTTCAGGAATCCAGGCCCAC...GGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGACCGACCTGGGAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp TCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAAGGCCGCTGGGCGACTaGGCCACTCGGGCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: SIPRPKPADRGPALGWVSRPLGD*ATRAAG
Trigger: TCCAGCTGCCCGAGTGGCTCAGTCGCCCAGCGGCCT...TGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553789.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CTCCCCACCATGAGTGAGGGGTCTGGTCTGACAGTTGGGCCTTCAGAGCCAGGCGCCCCGGTGACAGGGTaGACCCTGAGAGGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: LPTMSEGSGLTVGPSEPGAPVTG*TLRGAP
Trigger: GGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGC...GCCTGGCTCTGAAGGCCCAACTGTCAGACCAGACCCCTCACTCATGGTGGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGCCCAGCAGGGCCAGCCGGATCTaGGTGGCCGCATCCACCAGA +
Preference number: 4 (lower is better)
Translates to: AGPSWVVAIILRPQWEPSRASRI*VAASTR
Trigger: TCTGGTGGATGCGGCCACGCAGATCCGGCTGGCCCT...GCTGGGCTCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTGGAGGCTGGTCAGCCGCTCCCTaGTCACCATGTGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: VPRPGDRVNPERSPQTGGWSAAP*SPCGTW
Trigger: CCAGGTGCCACATGGTGAGCAGGGAGCGGCTGACCA...GCCTCCAGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGCCAGACCAGGCCAGCTaGTTCCGTCACCCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: LAQSPLIEGQPWVGCQARPDQAS*FRHPLC
Trigger: GCAGAGCGGGTGACGGAAGCAGCTGGCCTGGTCTGG...CCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553789.5
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGAGGCCACCAGGCTCATaGCTGCCCTGCAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: PRPKPADRGPALGWVSGKRPPGS*LPCSWD
Trigger: GTCCCAGCTGCAGGGCAGCCATGAGCCTGGTGGCCT...CTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGAGGCCACCAGGCTCATaGCTGCCCTGCAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: LAQSPLIEGQPWVGCQARRPPGS*LPCSWD
Trigger: GTCCCAGCTGCAGGGCAGCCATGAGCCTGGTGGCCT...CCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CTCCCCACCATGAGTGAGGGGTCTGGTCTGACAGTTGGGCCTTCAGAGCCAGGCAACCCGCGCTGGGGCTaGCTCCACTGCTCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: LPTMSEGSGLTVGPSEPGNPRWG*LHCSAA
Trigger: GGCCGCTGAGCAGTGGAGCCAGCCCCAGCGCGGGTT...GCCTGGCTCTGAAGGCCCAACTGTCAGACCAGACCCCTCACTCATGGTGGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGAGGAGCTCAGCGTGCGAATaGGCCGGAGCCTCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: AQSPLIEGQPWVGCQARRSSACE*AGASGC
Trigger: GCAGCCTGAGGCTCCGGCCCATTCGCACGCTGAGCT...CCTCCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGAGTGTCGGGAGTGCGCCTaGGAGAGCAGGTGGGACCAG +
Preference number: 4 (lower is better)
Translates to: RPKPADRGPALGWVSGKECRECA*ESRWDQ
Trigger: CTGGTCCCACCTGCTCTCCCAGGCGCACTCCCGACA...CTCCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp TTTCCCAGGTCGGTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCAGGGCGATTCTGTCCTaGCCAGGGGCATGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: FPRSVPRPGDRVNPERSPRAILS*PGAWPE
Trigger: CTCAGGCCATGCCCCTGGCCAGGACAGAATCGCCCT...GGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGACCGACCTGGGAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp TTTCCCAGGTCGGTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCGCCACCTGGGGCCTTTaGAAGGTCCGAGGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: FPRSVPRPGDRVNPERSPATWGL*KVRGAR
Trigger: TCTGGCTCCTCGGACCTTCCAAAGGCCCCAGGTGGC...GGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGACCGACCTGGGAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp AGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGAGCAGGTTCCCGGGGTaGAGGTCCCGGCACAGCACC +
Preference number: 4 (lower is better)
Translates to: RQCPPFLAQSPLIEGQPWSRFPG*RSRHST
Trigger: GGTGCTGTGCCGGGACCTCCACCCCGGGAACCTGCT...CCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTGCCTCCCCGCAGCACTaGGGCTCCACCTCTGACCAC +
Preference number: 4 (lower is better)
Translates to: PPFLAQSPLIEGQPWVGCASPQH*GSTSDH
Trigger: GTGGTCAGAGGTGGAGCCCCAGTGCTGCGGGGAGGC...ACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553789.5
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp TGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGGGGCCAGCCCTGGGTTaGGTGTCAGGCAAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: CPPFLAQSPLIEGQPWVGGPALG*VSGKEE
Trigger: CTCCTCCTTGCCTGACACCCAACCCAGGGCTGGCCC...CCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553789.5
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGGGGCCAGCCCTGGGTTaGGTGTCAGGCAAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: LAQSPLIEGQPWVGCQARGPALG*VSGKEE
Trigger: CTCCTCCTTGCCTGACACCCAACCCAGGGCTGGCCC...CCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553789.5
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGAGGGGGCCAGCCCTGGGTTaGGTGTCAGGCAAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: AQSPLIEGQPWVGCQARRGPALG*VSGKEE
Trigger: CTCCTCCTTGCCTGACACCCAACCCAGGGCTGGCCC...CCTCCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553789.5
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGCTGCAGGTGGCAGTTaGAGATCTCCTCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: PRPKPADRGPALGWVSGKAAGGS*RSPLPA
Trigger: GGCGGGCAGAGGAGATCTTCAACTGCCACCTGCAGC...CTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CAGAGCAGGCTTTATTGGGGCCGTGTAAACCCCAGGGAGAGGCAGGACGTGGACGGAGCCTCAGGCTGCTaGAACCCGCGCTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QSRLYWGRVNPRERQDVDGASGC*NPRWGW
Trigger: CCAGCCCCAGCGCGGGTTTCAGCAGCCTGAGGCTCC...GTCCACGTCCTGCCTCTCCCTGGGGTTTACACGGCCCCAATAAAGCCTGCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCTGCACCTTCTCGATaGCCCCGACCACCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PFLAQSPLIEGQPWVGCQAAPSR*PRPPCS
Trigger: GCTGCAGGGTGGTCGGGGTCATCGAGAAGGTGCAGC...CTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGAGGAGGGACTCCGTGTGGGATaGTGGTCAGCCGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: PKPADRGPALGWVSGKEEGLRVG*WSAAPC
Trigger: GCAGGGAGCGGCTGACCATCATCCCACACGGAGTCC...CTCCTCCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGCCCAGCGCTGACAGGCAGCTCTaGTCCATGCCTCGGCCACAG +
Preference number: 4 (lower is better)
Translates to: AGPSWVVAIILRPQWEPSADRQL*SMPRPQ
Trigger: CTGTGGCCGAGGCATGGATCAGAGCTGCCTGTCAGC...GCTGGGCTCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGCCGGCCCCATCTGCTaGCAGGCAGCTCTGATCCAT +
Preference number: 4 (lower is better)
Translates to: PRPKPADRGPALGWVSGKAGPIC*QAALIH
Trigger: ATGGATCAGAGCTGCCTGTCAGCAGATGGGGCCGGC...CTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGGTGGGCCTGGATTCCTaGAGGGTGGCTCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: VGAQQDRQCPPFLAQSPLVGLDS*RVALGQ
Trigger: CTGTCCCAGAGCCACCCTTCAGGAATCCAGGCCCAC...CAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGGGCTCATGGCTGCCCTaGAGCTGGGACCATGTTGGC +
Preference number: 4 (lower is better)
Translates to: VGAQQDRQCPPFLAQSPLGSWLP*SWDHVG
Trigger: GCCAACATGGTCCCAGCTGCAGGGCAGCCATGAGCC...CAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp CCCAGTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCCACCAGGCTCATGGCTaGCCTGCAGCTGGGACCATG +
Preference number: 4 (lower is better)
Translates to: PSGSPAGQTVPSIPRPKPHQAHG*PAAGTM
Trigger: CATGGTCCCAGCTGCAGGGCAGCCATGAGCCTGGTG...GGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCACTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp AGGTCGGTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTCACCAGGCTCATGGCTaGCCTGCAGCTGGGACCATG +
Preference number: 4 (lower is better)
Translates to: RSVPRPGDRVNPERSPQTHQAHG*PAAGTM
Trigger: CATGGTCCCAGCTGCAGGGCAGCCATGAGCCTGGTG...AGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGACCGACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000557413.6
CDS-3UTR GCA 90 bp AGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGCGGCAGAGCTCAGCGTaGGAATGGGCCGGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: RQCPPFLAQSPLIEGQPWRQSSA*EWAGAS
Trigger: TGAGGCTCCGGCCCATTCGCACGCTGAGCTCTGCCG...CCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GCCCCAGTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCGGGTCCTGGACCAGCTaGACCTTCTCGATGACCCCG +
Preference number: 4 (lower is better)
Translates to: APVGAQQDRQCPPFLAQSGSWTS*TFSMTP
Trigger: CGGGGTCATCGAGAAGGTGCAGCTGGTCCAGGACCC...GCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCACTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGAAAGGTCCCTCCGGTTaGCGGGTCCTGGACCAGCTG +
Preference number: 4 (lower is better)
Translates to: PSIPRPKPADRGPALGWVKGPSG*RVLDQL
Trigger: CAGCTGGTCCAGGACCCGGCAACCGGAGGGACCTTT...CACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGCCCAGCTGGTCAGCCGCTCCCTaGTCACCATGTGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: AGPSWVVAIILRPQWEPSWSAAP*SPCGTW
Trigger: CCAGGTGCCACATGGTGAGCAGGGAGCGGCTGACCA...GCTGGGCTCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GCCCCAGTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCAGAATGTCGGGAGTaGGCCTGGGAGAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: APVGAQQDRQCPPFLAQSPECRE*AWESRW
Trigger: CCACCTGCTCTCCCAGGCGCACTCCCGACATTCTGG...GCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCACTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTGGAGGCCGCTACCAGCATCTCTaGCGCCCACTGCTTCACCTG +
Preference number: 4 (lower is better)
Translates to: VPRPGDRVNPERSPQTGGRYQHL*RPLLHL
Trigger: CAGGTGAAGCAGTGGGCGGCAGAGATGCTGGTAGCG...GCCTCCAGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGAGGAGCCAGACCAGGCCAGCTaGTTCCGTCACCCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: PKPADRGPALGWVSGKEEPDQAS*FRHPLC
Trigger: GCAGAGCGGGTGACGGAAGCAGCTGGCCTGGTCTGG...CTCCTCCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553789.5
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCAGGCCACCAGGCTCATaGCTGCCCTGCAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: GQTVPSIPRPKPADRGPARPPGS*LPCSWD
Trigger: GTCCCAGCTGCAGGGCAGCCATGAGCCTGGTGGCCT...GGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp AGCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGCCCAGAGCTCAGCGTGCGAATaGGCCGGAGCCTCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SWPFLGGGHNSEAPVGAQSSACE*AGASGC
Trigger: GCAGCCTGAGGCTCCGGCCCATTCGCACGCTGAGCT...CTGGGCTCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCAGCTCAGCGTGCGAATaGGCCGGAGCCTCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: DRQCPPFLAQSPLIEGQPSSACE*AGASGC
Trigger: GCAGCCTGAGGCTCCGGCCCATTCGCACGCTGAGCT...GGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp TTTCCCAGGTCGGTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCGTAGGGGACTCCGTGTaGGATGATGGTCAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: FPRSVPRPGDRVNPERSPVGDSV*DDGQPL
Trigger: GAGCGGCTGACCATCATCCCACACGGAGTCCCCTAC...GGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGACCGACCTGGGAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp TGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGGCCTGGGAGAGCAGGTaGGACCAGAGAGTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: CPPFLAQSPLIEGQPWVGAWESR*DQRVPP
Trigger: AGGAGGCACTCTCTGGTCCCACCTGCTCTCCCAGGC...CCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp AGTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTTGTCGGGAGTGCGCCTaGGAGAGCAGGTGGGACCAG +
Preference number: 4 (lower is better)
Translates to: SGSPAGQTVPSIPRPKPACRECA*ESRWDQ
Trigger: CTGGTCCCACCTGCTCTCCCAGGCGCACTCCCGACA...AGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp TCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCACTCTCACACTCCAGGTaGCCCTGCCACAGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: SIPRPKPADRGPALGWVSLSHSR*PCHSPG
Trigger: GCCGGGGCTGTGGCAGGGCCACCTGGAGTGTGAGAG...TGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp TCCAGGAGCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGCCTCCCCGCAGCACTaGGGCTCCACCTCTGACCAC +
Preference number: 4 (lower is better)
Translates to: SRSWPFLGGGHNSEAPVGASPQH*GSTSDH
Trigger: GTGGTCAGAGGTGGAGCCCCAGTGCTGCGGGGAGGC...TCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGCTCCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CAAGCCTTGACTGCCCCCACCTCCAGCTTTTCCAGGAGCTGGCCCTTCCTGGGTGCCTCCCCGCAGCACTaGGGCTCCACCTCTGACCAC +
Preference number: 4 (lower is better)
Translates to: QALTAPTSSFSRSWPFLGASPQH*GSTSDH
Trigger: GTGGTCAGAGGTGGAGCCCCAGTGCTGCGGGGAGGC...ACCCAGGAAGGGCCAGCTCCTGGAAAAGCTGGAGGTGGGGGCAGTCAAGGCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTGGAGGCCCTGAAGGGTGGCTCTaGGACAGTGCCATTCCCGTC +
Preference number: 4 (lower is better)
Translates to: VPRPGDRVNPERSPQTGGPEGWL*DSAIPV
Trigger: GACGGGAATGGCACTGTCCCAGAGCCACCCTTCAGG...GCCTCCAGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp AGTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGGGCCAGCCCTGGGTTaGGTGTCAGGCAAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: SGSPAGQTVPSIPRPKPAGPALG*VSGKEE
Trigger: CTCCTCCTTGCCTGACACCCAACCCAGGGCTGGCCC...AGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp TTTCCCAGGTCGGTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCAGCTTTTCCAGGAGCTaGCCCTTCCTGGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: FPRSVPRPGDRVNPERSPSFSRS*PFLGGG
Trigger: GCCACCACCCAGGAAGGGCCAGCTCCTGGAAAAGCT...GGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGACCGACCTGGGAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGAGGAGGTCCTCTTGCACCCCTaGGGCAGGCTGCCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: PKPADRGPALGWVSGKEEVLLHP*GRLPLF
Trigger: GAAGAGGGGCAGCCTGCCCCAGGGGTGCAAGAGGAC...CTCCTCCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTGGAGGCAATCCAGCCCTCCTAGCTTaGAGGTGCAGGTGGCCACCT +
Preference number: 4 (lower is better)
Translates to: PRPGDRVNPERSPQTGGNPALLA*RCRWPP
Trigger: AGGTGGCCACCTGCACCTTCAAGCTAGGAGGGCTGG...ATTGCCTCCAGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp AGTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGCTGACAGGCAGCTCTaGTCCATGCCTCGGCCACAG +
Preference number: 4 (lower is better)
Translates to: SGSPAGQTVPSIPRPKPAADRQL*SMPRPQ
Trigger: CTGTGGCCGAGGCATGGATCAGAGCTGCCTGTCAGC...AGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGAGGAGGCCGGCCCCATCTGCTaGCAGGCAGCTCTGATCCAT +
Preference number: 4 (lower is better)
Translates to: PKPADRGPALGWVSGKEEAGPIC*QAALIH
Trigger: ATGGATCAGAGCTGCCTGTCAGCAGATGGGGCCGGC...CTCCTCCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTGGAGGCCTGGCAGGGAGGAGCTaGGGGCAAAACTCTAGTGGA +
Preference number: 4 (lower is better)
Translates to: VPRPGDRVNPERSPQTGGLAGRS*GQNSSG
Trigger: TCCACTAGAGTTTTGCCCTCAGCTCCTCCCTGCCAG...GCCTCCAGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGAGGGTGAGGGGTCTGGTCTaGCAGTTGGGCCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: AQSPLIEGQPWVGCQARRVRGLV*QLGLQS
Trigger: GCTCTGAAGGCCCAACTGTCAGACCAGACCCCTCAC...CCTCCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTGGAGGCTCTCCCCACCATGAGTaGGGGGTCTGGTCTGACAGT +
Preference number: 4 (lower is better)
Translates to: VPRPGDRVNPERSPQTGGSPHHE*GVWSDS
Trigger: ACTGTCAGACCAGACCCCTCACTCATGGTGGGGAGA...GCCTCCAGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR TCA 90 bp TTTCCCAGGTCGGTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCGCTCAACGGGTCTGTTaGCCCACCAGCTTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: FPRSVPRPGDRVNPERSPAQRVC*PTSLLH
Trigger: ATGGAGCAAGCTGGTGGGTCAACAGACCCGTTGAGC...GGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGACCGACCTGGGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555910.5
CDS-3UTR GCA 90 bp CCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTGGAGGCAATGGCTCATGGCTGCCCTaGAGCTGGGACCATGTTGGC +
Preference number: 4 (lower is better)
Translates to: PRPGDRVNPERSPQTGGNGSWLP*SWDHVG
Trigger: GCCAACATGGTCCCAGCTGCAGGGCAGCCATGAGCC...ATTGCCTCCAGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000557413.6
CDS-3UTR GCA 90 bp AGCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGCCCAGGGGTCCTGGACCAGCTaGACCTTCTCGATGACCCCG +
Preference number: 4 (lower is better)
Translates to: SWPFLGGGHNSEAPVGAQGSWTS*TFSMTP
Trigger: CGGGGTCATCGAGAAGGTGCAGCTGGTCCAGGACCC...CTGGGCTCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp AGCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGCCCAGAAAGGTCCCTCCGGTTaGCGGGTCCTGGACCAGCTG +
Preference number: 4 (lower is better)
Translates to: SWPFLGGGHNSEAPVGAQKGPSG*RVLDQL
Trigger: CAGCTGGTCCAGGACCCGGCAACCGGAGGGACCTTT...CTGGGCTCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTGGAGGCCAGAGAGTGCCTCCTTaGACATGCTCCAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: VPRPGDRVNPERSPQTGGQRVPP*TCSRCR
Trigger: CCTGCACCTGGAGCATGTGCAAGGAGGCACTCTCTG...GCCTCCAGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CAGAGCAGGCTTTATTGGGGCCGTGTAAACCCCAGGGAGAGGCAGGACGTGGACAGCACCCCCTGCTCGTaGAGCGCCTCCAGCGCTACC +
Preference number: 4 (lower is better)
Translates to: QSRLYWGRVNPRERQDVDSTPCS*SASSAT
Trigger: GGTAGCGCTGGAGGCGCTGCACGAGCAGGGGGTGCT...GTCCACGTCCTGCCTCTCCCTGGGGTTTACACGGCCCCAATAAAGCCTGCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCACGCCCCGGTGACAGGGAGCACCCCCTGCTCGTaGAGCGCCTCCAGCGCTACC +
Preference number: 4 (lower is better)
Translates to: GQNSSGNFPGRSHAPVTGSTPCS*SASSAT
Trigger: GGTAGCGCTGGAGGCGCTGCACGAGCAGGGGGTGCT...CCCTGTCACCGGGGCGTGGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp TGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTTCCGTCACCCGCTCTaGCCTCTTACCCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: CPPFLAQSPLIEGQPWVGFRHPL*PLTPPA
Trigger: AGCTGGTGGGGTAAGAGGGCAGAGCGGGTGACGGAA...CCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553789.5
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTTCCGTCACCCGCTCTaGCCTCTTACCCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: PSIPRPKPADRGPALGWVFRHPL*PLTPPA
Trigger: AGCTGGTGGGGTAAGAGGGCAGAGCGGGTGACGGAA...CACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553789.5
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CAAGCCTTGACTGCCCCCACCTCCAGCTTTTCCAGGAGCTGGCCCTTCCTGGGTCCAGACCAGGCCAGCTaGTTCCGTCACCCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: QALTAPTSSFSRSWPFLGPDQAS*FRHPLC
Trigger: GCAGAGCGGGTGACGGAAGCAGCTGGCCTGGTCTGG...ACCCAGGAAGGGCCAGCTCCTGGAAAAGCTGGAGGTGGGGGCAGTCAAGGCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCGAGGCCCACATGGCATaGTGCTCACCACCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: GQTVPSIPRPKPADRGPAEAHMA*CSPPAL
Trigger: CAGGGCTGGTGGTGAGCAGCATGCCATGTGGGCCTC...GGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp CCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGAGGAGCTCAGGCTAGGCAGCTaGTTCCTCTGGCCGGGCTAC +
Preference number: 4 (lower is better)
Translates to: PKPADRGPALGWVSGKEELRLGS*FLWPGY
Trigger: GTAGCCCGGCCAGAGGAAGCAGCTGCCTAGCCTGAG...CTCCTCCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553315.1
CDS-3UTR GCA 90 bp CCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGAGGAGCACCAGGCTCATGGCTaGCCTGCAGCTGGGACCCTT +
Preference number: 4 (lower is better)
Translates to: PKPADRGPALGWVSGKEEHQAHG*PAAGTL
Trigger: AAGGGTCCCAGCTGCAGGGCAGCCATGAGCCTGGTG...CTCCTCCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555647.5
CDS-3UTR CCA 90 bp CCCAGTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGTCCTGAGGTCAGTGTaGTCAGCGAGTGAGGACCCC +
Preference number: 4 (lower is better)
Translates to: PSGSPAGQTVPSIPRPKPVLRSV*SASEDP
Trigger: GGGGTCCTCACTCGCTGACCACACTGACCTCAGGAC...GGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCACTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp AGCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGCCCAGGCCACCGCGCAGGCCTaGGGCTCTGTTTTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: SWPFLGGGHNSEAPVGAQATAQA*GSVFLS
Trigger: GGAAAGGAAAACAGAGCCCCAGGCCTGCGCGGTGGC...CTGGGCTCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp GGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCACGCCCAACCCGCGCTGGGGCTaGCTCCACTGCTCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: GGAEGKTLVEISQVGPTPNPRWG*LHCSAA
Trigger: GGCCGCTGAGCAGTGGAGCCAGCCCCAGCGCGGGTT...GGGCGTGGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTGGAGGCTCCCTGCTCACCATGTaGCACCTGGGTAGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: VPRPGDRVNPERSPQTGGSLLTM*HLGRLF
Trigger: GAAGAGCCTACCCAGGTGCCACATGGTGAGCAGGGA...GCCTCCAGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGAGGTAGGGGACTCCGTGTaGGATGATGGTCAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: RPKPADRGPALGWVSGKEVGDSV*DDGQPL
Trigger: GAGCGGCTGACCATCATCCCACACGGAGTCCCCTAC...CTCCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp TCTGACAGTTGGGCCTTCAGAGCCAGGCACGTGGACCGTGTCAGAAGCGCCACCTGTCGGGAGTGCGCCTaGGAGAGCAGGTGGGACCAG +
Preference number: 4 (lower is better)
Translates to: SDSWAFRARHVDRVRSATCRECA*ESRWDQ
Trigger: CTGGTCCCACCTGCTCTCCCAGGCGCACTCCCGACA...GGTGGCGCTTCTGACACGGTCCACGTGCCTGGCTCTGAAGGCCCAACTGTCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp TCCAGGAGCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGACCTTCAGCCTCCCTCTaGGGTCTGGTGGATGGGGCC +
Preference number: 4 (lower is better)
Translates to: SRSWPFLGGGHNSEAPVGPSASL*GLVDGA
Trigger: GGCCCCATCCACCAGACCCCAGAGGGAGGCTGAAGG...TCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGCTCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCGTGCAGGTGGCCACCTaGGGCCTTTGGAAGGTCCGA +
Preference number: 4 (lower is better)
Translates to: GQTVPSIPRPKPADRGPAVQVAT*GLWKVR
Trigger: TCGGACCTTCCAAAGGCCCCAGGTGGCCACCTGCAC...GGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CAGAGCAGGCTTTATTGGGGCCGTGTAAACCCCAGGGAGAGGCAGGACGTGGACAGCAGGTTCCCGGGGTaGAGGTCCCGGCACAGCACC +
Preference number: 4 (lower is better)
Translates to: QSRLYWGRVNPRERQDVDSRFPG*RSRHST
Trigger: GGTGCTGTGCCGGGACCTCCACCCCGGGAACCTGCT...GTCCACGTCCTGCCTCTCCCTGGGGTTTACACGGCCCCAATAAAGCCTGCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CAGAGCAGGCTTTATTGGGGCCGTGTAAACCCCAGGGAGAGGCAGGACGTGGACGCCTCCCCGCAGCACTaGGGCTCCACCTCTGACCAC +
Preference number: 4 (lower is better)
Translates to: QSRLYWGRVNPRERQDVDASPQH*GSTSDH
Trigger: GTGGTCAGAGGTGGAGCCCCAGTGCTGCGGGGAGGC...GTCCACGTCCTGCCTCTCCCTGGGGTTTACACGGCCCCAATAAAGCCTGCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGCCTGAAGGGTGGCTCTaGGACAGTGCCATTCCCGTC +
Preference number: 4 (lower is better)
Translates to: PSIPRPKPADRGPALGWVPEGWL*DSAIPV
Trigger: GACGGGAATGGCACTGTCCCAGAGCCACCCTTCAGG...CACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000553789.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGAGCTGGGTGTGGGCCTaGATTCCTGAAGGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: PRPKPADRGPALGWVSGKSWVWA*IPEGWL
Trigger: GAGCCACCCTTCAGGAATCCAGGCCCACACCCAGCT...CTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553789.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGCCCAGCAGCTGGGTGTGGGCCTaGATTCCTGAAGGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: AGPSWVVAIILRPQWEPSSWVWA*IPEGWL
Trigger: GAGCCACCCTTCAGGAATCCAGGCCCACACCCAGCT...GCTGGGCTCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp TGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGAGCTGGAGCTGGGTGTaGGCCTGGATTCCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: CPPFLAQSPLIEGQPWVGSWSWV*AWIPEG
Trigger: CCCTTCAGGAATCCAGGCCCACACCCAGCTCCAGCT...CCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553789.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTaGGTTGGGTGTCAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: VGAQQDRQCPPFLAQSPLIEGQP*VGCQAR
Trigger: CCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTAT...CAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGATAGAGGGCCAGCCCTaGGTTGGGTGTCAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: PRPKPADRGPALGWVSGKIEGQP*VGCQAR
Trigger: CCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTAT...CTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553789.5
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CCCAGTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCAGCTTTTCCAGGAGCTaGCCCTTCCTGGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: PSGSPAGQTVPSIPRPKPSFSRS*PFLGGG
Trigger: GCCACCACCCAGGAAGGGCCAGCTCCTGGAAAAGCT...GGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCACTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp AGGTCGGTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTAGCTTTTCCAGGAGCTaGCCCTTCCTGGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: RSVPRPGDRVNPERSPQTSFSRS*PFLGGG
Trigger: GCCACCACCCAGGAAGGGCCAGCTCCTGGAAAAGCT...AGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGACCGACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp TCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGTCCTCTTGCACCCCTaGGGCAGGCTGCCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SIPRPKPADRGPALGWVSVLLHP*GRLPLF
Trigger: GAAGAGGGGCAGCCTGCCCCAGGGGTGCAAGAGGAC...TGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp AGGTCGGTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTTCAGAGCCAGGCACGTaGACCGTGTCAGAAGCGCCA +
Preference number: 4 (lower is better)
Translates to: RSVPRPGDRVNPERSPQTSEPGT*TVSEAP
Trigger: TGGCGCTTCTGACACGGTCCACGTGCCTGGCTCTGA...AGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGACCGACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CCCAGTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCTCAGAGCCAGGCACGTaGACCGTGTCAGAAGCGCCA +
Preference number: 4 (lower is better)
Translates to: PSGSPAGQTVPSIPRPKPSEPGT*TVSEAP
Trigger: TGGCGCTTCTGACACGGTCCACGTGCCTGGCTCTGA...GGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCACTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGAGTCAGAGCCAGGCACGTaGACCGTGTCAGAAGCGCCA +
Preference number: 4 (lower is better)
Translates to: RPKPADRGPALGWVSGKESEPGT*TVSEAP
Trigger: TGGCGCTTCTGACACGGTCCACGTGCCTGGCTCTGA...CTCCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGAGTGAGGACCCCTCCTaGAGCCAGCAGAGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: LAQSPLIEGQPWVGCQARSEDPS*SQQRAE
Trigger: CTCTGCTCTCTGCTGGCTCCAGGAGGGGTCCTCACT...CCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCACGCCCAGGGGGCCCAGCGTCTaGGTTCTGGCCAGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: GGAEGKTLVEISQVGPTPRGPSV*VLASPP
Trigger: AGGAGGGCTGGCCAGAACTCAGACGCTGGGCCCCCT...GGGCGTGGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp TCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGTGGGCCTGGATTCCTaGAGGGTGGCTCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: SIPRPKPADRGPALGWVSVGLDS*RVALGQ
Trigger: CTGTCCCAGAGCCACCCTTCAGGAATCCAGGCCCAC...TGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553789.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GGAGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGAGGCCGCTGGGCGACTaGGCCACTCGGGCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: GEAGRGPQRVMYRLRFHLRPLGD*ATRAAG
Trigger: TCCAGCTGCCCGAGTGGCTCAGTCGCCCAGCGGCCT...CAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGCTGGTTTGGGTCCACTaGGCCAGTGGATCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: PSIPRPKPADRGPALGWVLVWVH*ASGSVS
Trigger: GGACACTGATCCACTGGCTCAGTGGACCCAAACCAG...CACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGCTGGTTTGGGTCCACTaGGCCAGTGGATCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: LAQSPLIEGQPWVGCQARLVWVH*ASGSVS
Trigger: GGACACTGATCCACTGGCTCAGTGGACCCAAACCAG...CCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGAGGCTGGCAGGGAGGAGCTaGGGGCAAAACTCTAGTGGA +
Preference number: 4 (lower is better)
Translates to: AQSPLIEGQPWVGCQARRLAGRS*GQNSSG
Trigger: TCCACTAGAGTTTTGCCCTCAGCTCCTCCCTGCCAG...CCTCCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCGTGAGGGGTCTGGTCTaGCAGTTGGGCCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: DRQCPPFLAQSPLIEGQPVRGLV*QLGLQS
Trigger: GCTCTGAAGGCCCAACTGTCAGACCAGACCCCTCAC...GGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGTCCAACCTGCCCCAATaGGCCGTGGTCATTGCATGG +
Preference number: 4 (lower is better)
Translates to: VGAQQDRQCPPFLAQSPLSNLPQ*AVVIAW
Trigger: CCATGCAATGACCACGGCTCATTGGGGCAGGTTGGA...CAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR TCA 90 bp TGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTTCCCCCAGGCACCATaGGCCTCTTCCAAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: CPPFLAQSPLIEGQPWVGFPQAP*ASSKAS
Trigger: AGAAGCCTTGGAAGAGGCTCATGGTGCCTGGGGGAA...CCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR TCA 90 bp CCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTGAGGCCATCCCTCTGTaGAGGTCTGTCACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: PPFLAQSPLIEGQPWVGCEAIPL*RSVTGG
Trigger: CCCTCCTGTGACAGACCTTCACAGAGGGATGGCCTC...ACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR TCA 90 bp CCAGTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGGCTGAGCTCTTGCAGTaGGGCCATCCCTCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: PVGAQQDRQCPPFLAQSPAELLQ*GHPSVK
Trigger: CTTCACAGAGGGATGGCCTCACTGCAAGAGCTCAGC...CGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCACTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR TCA 90 bp AGGTCGGTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTGCTGAGCTCTTGCAGTaGGGCCATCCCTCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: RSVPRPGDRVNPERSPQTAELLQ*GHPSVK
Trigger: CTTCACAGAGGGATGGCCTCACTGCAAGAGCTCAGC...AGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGACCGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp AGGAGCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGCCCTGCTCAGCGGCCGCTaGAGGTGGCAGTTGAAGATC +
Preference number: 4 (lower is better)
Translates to: RSWPFLGGGHNSEAPVGALLSGR*RWQLKI
Trigger: GATCTTCAACTGCCACCTGCAGCGGCCGCTGAGCAG...GGCTCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCCTGCTCAGCGGCCGCTaGAGGTGGCAGTTGAAGATC +
Preference number: 4 (lower is better)
Translates to: DRQCPPFLAQSPLIEGQPLLSGR*RWQLKI
Trigger: GATCTTCAACTGCCACCTGCAGCGGCCGCTGAGCAG...GGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CAAGCCTTGACTGCCCCCACCTCCAGCTTTTCCAGGAGCTGGCCCTTCCTGGGTGGGTCCTGGACCAGCTaGACCTTCTCGATGACCCCG +
Preference number: 4 (lower is better)
Translates to: QALTAPTSSFSRSWPFLGGSWTS*TFSMTP
Trigger: CGGGGTCATCGAGAAGGTGCAGCTGGTCCAGGACCC...ACCCAGGAAGGGCCAGCTCCTGGAAAAGCTGGAGGTGGGGGCAGTCAAGGCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGCCCAGCCAGAGAGTGCCTCCTTaGACATGCTCCAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: AGPSWVVAIILRPQWEPSQRVPP*TCSRCR
Trigger: CCTGCACCTGGAGCATGTGCAAGGAGGCACTCTCTG...GCTGGGCTCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATACCAGAATGTCGGGAGTaGGCCTGGGAGAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GAQQDRQCPPFLAQSPLIPECRE*AWESRW
Trigger: CCACCTGCTCTCCCAGGCGCACTCCCGACATTCTGG...TATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CTCCCCACCATGAGTGAGGGGTCTGGTCTGACAGTTGGGCCTTCAGAGCCAGGCGGCAGCTCTGATCCATaGCTCGGCCACAGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: LPTMSEGSGLTVGPSEPGGSSDP*LGHSPL
Trigger: TAGGGGGCTGTGGCCGAGGCATGGATCAGAGCTGCC...GCCTGGCTCTGAAGGCCCAACTGTCAGACCAGACCCCTCACTCATGGTGGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GCCCCAGTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCATCTCTGCCGCCCACTaGTTCACCTGCTCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: APVGAQQDRQCPPFLAQSISAAH*FTCSSL
Trigger: GAGAGAGGAGCAGGTGAAGCAGTGGGCGGCAGAGAT...GCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCACTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp TGGCAGGGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCCGGCACAGCACCCCCTaGTCGTGCAGCGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: WQGGAEGKTLVEISQVGPRHSTP*SCSASS
Trigger: GCTGGAGGCGCTGCACGAGCAGGGGGTGCTGTGCCG...GGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCCCTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGAGGAGGAGCCGGATGTGACCTaGCTGGTCCAGGAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: PKPADRGPALGWVSGKEEEPDVT*LVQEQV
Trigger: AACCTGCTCCTGGACCAGGCAGGTCACATCCGGCTC...CTCCTCCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGCGGGTAGGCTCGAACTaGAGCAGCTCAGTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: PRPKPADRGPALGWVSGKRVGSN*SSSVSR
Trigger: TCTGCTGACTGAGCTGCTGCAGTTCGAGCCTACCCG...CTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000553789.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp AGTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTTTCCGTCACCCGCTCTaGCCTCTTACCCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: SGSPAGQTVPSIPRPKPAFRHPL*PLTPPA
Trigger: AGCTGGTGGGGTAAGAGGGCAGAGCGGGTGACGGAA...AGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CCCAGTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCAACAGATGGCATCCCTaGTTCTGGGCCTCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: PSGSPAGQTVPSIPRPKPNRWHP*FWASPA
Trigger: AGCTGGGGAGGCCCAGAAGCAGGGATGCCATCTGTT...GGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCACTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CAAGCCTTGACTGCCCCCACCTCCAGCTTTTCCAGGAGCTGGCCCTTCCTGGGTGAGGCCCACATGGCATaGTGCTCACCACCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: QALTAPTSSFSRSWPFLGEAHMA*CSPPAL
Trigger: CAGGGCTGGTGGTGAGCAGCATGCCATGTGGGCCTC...ACCCAGGAAGGGCCAGCTCCTGGAAAAGCTGGAGGTGGGGGCAGTCAAGGCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp GTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTGGAGGCTCTCCGTGGACCGGATaGATTGCCCCTGCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: VPRPGDRVNPERSPQTGGSPWTG*IAPAVF
Trigger: AAACACAGCAGGGGCAATCCATCCGGTCCACGGAGA...GCCTCCAGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GCCCCAGTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCGGAGGCCACACACGCTaGGCTCAAATGCTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: APVGAQQDRQCPPFLAQSGGHTR*AQMLFL
Trigger: GAGGAACAGCATTTGAGCCCAGCGTGTGTGGCCTCC...GCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCACTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp GTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTGGAGGCCACGTCGCTCCTTGTTaGGGTCAACGTGTATGCCAC +
Preference number: 4 (lower is better)
Translates to: VPRPGDRVNPERSPQTGGHVAPC*GQRVCH
Trigger: GTGGCATACACGTTGACCCCAACAAGGAGCGACGTG...GCCTCCAGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGTCCCTGCTCACCATGTaGCACCTGGGTAGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LAQSPLIEGQPWVGCQARSLLTM*HLGRLF
Trigger: GAAGAGCCTACCCAGGTGCCACATGGTGAGCAGGGA...CCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp AGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTAGGGGACTCCGTGTaGGATGATGGTCAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: RQCPPFLAQSPLIEGQPWVGDSV*DDGQPL
Trigger: GAGCGGCTGACCATCATCCCACACGGAGTCCCCTAC...CCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGGCCTGGGAGAGCAGGTaGGACCAGAGAGTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PAGQTVPSIPRPKPADRGAWESR*DQRVPP
Trigger: AGGAGGCACTCTCTGGTCCCACCTGCTCTCCCAGGC...CCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp AGGTCGGTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTGCCTTCATCCTCTCCTaGGTAGAGCCAGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: RSVPRPGDRVNPERSPQTAFILS*VEPELS
Trigger: GCTCAGCTCTGGCTCTACCCAGGAGAGGATGAAGGC...AGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGACCGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGAGGAGAGGAGCCAGAGGTGCTaGTCCTGGCTGTGGGTTCAC +
Preference number: 4 (lower is better)
Translates to: PKPADRGPALGWVSGKEERSQRC*SWLWVH
Trigger: GTGAACCCACAGCCAGGACCAGCACCTCTGGCTCCT...CTCCTCCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp TCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGCCACCTGGGGCCTTTaGAAGGTCCGAGGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: SIPRPKPADRGPALGWVSATWGL*KVRGAR
Trigger: TCTGGCTCCTCGGACCTTCCAAAGGCCCCAGGTGGC...TGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp AGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTCCTCATCCCTCCCTGCACGCCTCCCCGCAGCACTaGGGCTCCACCTCTGACCAC +
Preference number: 4 (lower is better)
Translates to: SDMVNSQGLRGSPHPSLHASPQH*GSTSDH
Trigger: GTGGTCAGAGGTGGAGCCCCAGTGCTGCGGGGAGGC...GTGCAGGGAGGGATGAGGACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555009.5
CDS-3UTR CCA 90 bp AGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGAGCTGGGTGTGGGCCTaGATTCCTGAAGGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: RQCPPFLAQSPLIEGQPWSWVWA*IPEGWL
Trigger: GAGCCACCCTTCAGGAATCCAGGCCCACACCCAGCT...CCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553789.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGAGGAGAGCTGGAGCTGGGTGTaGGCCTGGATTCCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: PKPADRGPALGWVSGKEESWSWV*AWIPEG
Trigger: CCCTTCAGGAATCCAGGCCCACACCCAGCTCCAGCT...CTCCTCCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553789.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTGGAGGCAATATAGAGGGCCAGCCCTaGGTTGGGTGTCAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: PRPGDRVNPERSPQTGGNIEGQP*VGCQAR
Trigger: CCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTAT...ATTGCCTCCAGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCAGCTTTTCCAGGAGCTaGCCCTTCCTGGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: DRQCPPFLAQSPLIEGQPSFSRS*PFLGGG
Trigger: GCCACCACCCAGGAAGGGCCAGCTCCTGGAAAAGCT...GGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCCCTGCACAACAGATaGCATCCCTGCTTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PSIPRPKPADRGPALGWVSLHNR*HPCFWA
Trigger: GGCCCAGAAGCAGGGATGCCATCTGTTGTGCAGGGA...CACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CAGAGCAGGCTTTATTGGGGCCGTGTAAACCCCAGGGAGAGGCAGGACGTGGACGTCCTCTTGCACCCCTaGGGCAGGCTGCCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: QSRLYWGRVNPRERQDVDVLLHP*GRLPLF
Trigger: GAAGAGGGGCAGCCTGCCCCAGGGGTGCAAGAGGAC...GTCCACGTCCTGCCTCTCCCTGGGGTTTACACGGCCCCAATAAAGCCTGCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp TCCCCTGAGGCCCACATGGCATGCTGCTCACCACCAGCCCTGCGTCCTACTTCCCTGCGTCCTACTTCCTaGCAGCCCCAAGCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: SPEAHMACCSPPALRPTSLRPTS*QPQARS
Trigger: AGAGCGAGCTTGGGGCTGCCAGGAAGTAGGACGCAG...GGAAGTAGGACGCAGGGCTGGTGGTGAGCAGCATGCCATGTGGGCCTCAGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp TCCAGGAGCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGGCAGCTGCTTCCTCTaGCCGGGCTACACCTCACCT +
Preference number: 4 (lower is better)
Translates to: SRSWPFLGGGHNSEAPVGGSCFL*PGYTSP
Trigger: AGGTGAGGTGTAGCCCGGCCAGAGGAAGCAGCTGCC...TCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGCTCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553315.1
CDS-3UTR CCA 90 bp GACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCAGTGAGGACCCCTCCTaGAGCCAGCAGAGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: DRQCPPFLAQSPLIEGQPSEDPS*SQQRAE
Trigger: CTCTGCTCTCTGCTGGCTCCAGGAGGGGTCCTCACT...GGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp TGGCAGGGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCCCGGTTGCCGGGTCCTaGACCAGCTGCACCGCGCTG +
Preference number: 4 (lower is better)
Translates to: WQGGAEGKTLVEISQVGPPVAGS*TSCTAL
Trigger: CAGCGCGGTGCAGCTGGTCCAGGACCCGGCAACCGG...GGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCCCTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555009.5
CDS-3UTR TCA 90 bp TCTGACAGTTGGGCCTTCAGAGCCAGGCACGTGGACCGTGTCAGAAGCGCCACCTGCTCCAGGTACACGTaGGCTTGGGACCGTGCTCGT +
Preference number: 4 (lower is better)
Translates to: SDSWAFRARHVDRVRSATCSRYT*AWDRAR
Trigger: ACGAGCACGGTCCCAAGCTCACGTGTACCTGGAGCA...GGTGGCGCTTCTGACACGGTCCACGTGCCTGGCTCTGAAGGCCCAACTGTCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp AGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTCCTCATCCCTCCCTGCACGGACTCCGTGTGGGATaGTGGTCAGCCGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: SDMVNSQGLRGSPHPSLHGLRVG*WSAAPC
Trigger: GCAGGGAGCGGCTGACCATCATCCCACACGGAGTCC...GTGCAGGGAGGGATGAGGACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555009.5
CDS-3UTR TCA 90 bp GGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCACGCCCCGGTGACAGGGGCCGGCCCCATCTGCTaGCAGGCAGCTCTGATCCAT +
Preference number: 4 (lower is better)
Translates to: GQNSSGNFPGRSHAPVTGAGPIC*QAALIH
Trigger: ATGGATCAGAGCTGCCTGTCAGCAGATGGGGCCGGC...CCCTGTCACCGGGGCGTGGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GCCCCAGTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCTGGGGCTCCACCTCTaGCCACTGGCCAAAATATGT +
Preference number: 4 (lower is better)
Translates to: APVGAQQDRQCPPFLAQSLGLHL*PLAKIC
Trigger: ACATATTTTGGCCAGTGGTCAGAGGTGGAGCCCCAG...GCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCACTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp AGGTCGGTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTCTGGGGCTCCACCTCTaGCCACTGGCCAAAATATGT +
Preference number: 4 (lower is better)
Translates to: RSVPRPGDRVNPERSPQTLGLHL*PLAKIC
Trigger: ACATATTTTGGCCAGTGGTCAGAGGTGGAGCCCCAG...AGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGACCGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGAGGCTGGGGCTCCACCTCTaGCCACTGGCCAAAATATGT +
Preference number: 4 (lower is better)
Translates to: AQSPLIEGQPWVGCQARRLGLHL*PLAKIC
Trigger: ACATATTTTGGCCAGTGGTCAGAGGTGGAGCCCCAG...CCTCCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553789.5
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp TTTCCCAGGTCGGTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCGCTCAACGGGTCTGTTaGCTGATGGGTAGATGGTTC +
Preference number: 4 (lower is better)
Translates to: FPRSVPRPGDRVNPERSPAQRVC*LMGRWF
Trigger: GAACCATCTACCCATCAGTCAACAGACCCGTTGAGC...GGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGACCGACCTGGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CCAGTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGTCTCCAGAGATGTCCTaGGTGGGGCACAACATGGCA +
Preference number: 4 (lower is better)
Translates to: PVGAQQDRQCPPFLAQSPSPEMS*VGHNMA
Trigger: TGCCATGTTGTGCCCCACTCAGGACATCTCTGGAGA...CGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp AGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGGCCTACTCGCTGTGTaGCTAAGAGGACTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: RQCPPFLAQSPLIEGQPWGLLAV*LRGLAR
Trigger: CCTGGCTAGTCCTCTTAGTCACACAGCGAGTAGGCC...CCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTGGAGGCGGAGGCAATTGTCTTTaGGGTAACCACTCACCCCAG +
Preference number: 4 (lower is better)
Translates to: VPRPGDRVNPERSPQTGGGGNCL*GNHSPQ
Trigger: CTGGGGTGAGTGGTTACCTCAAAGACAATTGCCTCC...GCCTCCAGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR TCA 90 bp AGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCGCCCCGGTGACAGGGTaGACCCTGAGAGGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: RGRTWTTESHVQAALSLVAPVTG*TLRGAP
Trigger: GGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGC...GACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTCCTGCCCCGGTGACAGGGTaGACCCTGAGAGGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: EVTVGSDMVNSQGLRGSPAPVTG*TLRGAP
Trigger: GGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGC...AGGACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTGGAGGCAATCTGGCAGGGAGGAGCTaGGGGCAAAACTCTAGTGGA +
Preference number: 4 (lower is better)
Translates to: PRPGDRVNPERSPQTGGNLAGRS*GQNSSG
Trigger: TCCACTAGAGTTTTGCCCTCAGCTCCTCCCTGCCAG...ATTGCCTCCAGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR TCA 90 bp AGGAGCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGCCTCTCCCCACCATGAGTaGGGGGTCTGGTCTGACAGT +
Preference number: 4 (lower is better)
Translates to: RSWPFLGGGHNSEAPVGASPHHE*GVWSDS
Trigger: ACTGTCAGACCAGACCCCTCACTCATGGTGGGGAGA...GGCTCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CCAGTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGGGAAGTGGTCCAGCCTaGCTTAGGGAGAGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: PVGAQQDRQCPPFLAQSPGSGPA*LRESSR
Trigger: TCTGCTACTCTCCCTAAGTCAGGCTGGACCACTTCC...CGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCACTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR TCA 90 bp CTCCCCACCATGAGTGAGGGGTCTGGTCTGACAGTTGGGCCTTCAGAGCCAGGCGAGGCCATCCCTCTGTaGAGGTCTGTCACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: LPTMSEGSGLTVGPSEPGEAIPL*RSVTGG
Trigger: CCCTCCTGTGACAGACCTTCACAGAGGGATGGCCTC...GCCTGGCTCTGAAGGCCCAACTGTCAGACCAGACCCCTCACTCATGGTGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR TCA 90 bp CAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGAGAGTCCCTGTCTGCTaGGCTCTTGCAGTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: QTVPSIPRPKPADRGPALRVPVC*ALAVRP
Trigger: TGGCCTCACTGCAAGAGCTCAGCAGACAGGGACTCT...CAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR TCA 90 bp AGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTGCCCCACCTTCCTTaGGCCTGTCAAGCCATACTC +
Preference number: 4 (lower is better)
Translates to: RQCPPFLAQSPLIEGQPWVPHLP*ACQAIL
Trigger: GAGTATGGCTTGACAGGCTCAAGGAAGGTGGGGCAC...CCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp AGGTCGGTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTCCAGAGCCACCCTGTTaGGAATCTGCTCCAGGTACA +
Preference number: 4 (lower is better)
Translates to: RSVPRPGDRVNPERSPQTPEPPC*ESAPGT
Trigger: TGTACCTGGAGCAGATTCGCAACAGGGTGGCTCTGG...AGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGACCGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GCCCCAGTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCAGAGCCACCCTGTTaGGAATCTGCTCCAGGTACA +
Preference number: 4 (lower is better)
Translates to: APVGAQQDRQCPPFLAQSPEPPC*ESAPGT
Trigger: TGTACCTGGAGCAGATTCGCAACAGGGTGGCTCTGG...GCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCACTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGAGGAGTGGGGTCAACGTGTATaGCACGGAGCAGCACGTCCA +
Preference number: 4 (lower is better)
Translates to: PKPADRGPALGWVSGKEEWGQRV*HGAARP
Trigger: TGGACGTGCTGCTCCGTGGCATACACGTTGACCCCA...CTCCTCCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CAGAGCAGGCTTTATTGGGGCCGTGTAAACCCCAGGGAGAGGCAGGACGTGGACAAAGGTCCCTCCGGTTaGCGGGTCCTGGACCAGCTG +
Preference number: 4 (lower is better)
Translates to: QSRLYWGRVNPRERQDVDKGPSG*RVLDQL
Trigger: CAGCTGGTCCAGGACCCGGCAACCGGAGGGACCTTT...GTCCACGTCCTGCCTCTCCCTGGGGTTTACACGGCCCCAATAAAGCCTGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCACGCCCCGGTGACAGGGAAAGGTCCCTCCGGTTaGCGGGTCCTGGACCAGCTG +
Preference number: 4 (lower is better)
Translates to: GQNSSGNFPGRSHAPVTGKGPSG*RVLDQL
Trigger: CAGCTGGTCCAGGACCCGGCAACCGGAGGGACCTTT...CCCTGTCACCGGGGCGTGGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTGCACATGCTCCAGGTaGAGGAAGATGGAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: PSIPRPKPADRGPALGWVCTCSR*RKMESS
Trigger: CGAGGACTCCATCTTCCTGCACCTGGAGCATGTGCA...CACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000553789.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGCCCAGCTGCACATGCTCCAGGTaGAGGAAGATGGAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: AGPSWVVAIILRPQWEPSCTCSR*RKMESS
Trigger: CGAGGACTCCATCTTCCTGCACCTGGAGCATGTGCA...GCTGGGCTCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGTGCCTCCTTGCACATaGTCCAGGTGCAGGAAGATG +
Preference number: 4 (lower is better)
Translates to: PRPKPADRGPALGWVSGKVPPCT*SRCRKM
Trigger: CATCTTCCTGCACCTGGAGCATGTGCAAGGAGGCAC...CTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp AGCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGCCCAGCAGAGAGTGCCTCCTTaGACATGCTCCAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: SWPFLGGGHNSEAPVGAQQRVPP*TCSRCR
Trigger: CCTGCACCTGGAGCATGTGCAAGGAGGCACTCTCTG...CTGGGCTCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCCAGAGAGTGCCTCCTTaGACATGCTCCAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: DRQCPPFLAQSPLIEGQPQRVPP*TCSRCR
Trigger: CCTGCACCTGGAGCATGTGCAAGGAGGCACTCTCTG...GGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp AGCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGCCCAGGGTGGGACCAGAGAGTaGCTCCTTGCACATGCTCCA +
Preference number: 4 (lower is better)
Translates to: SWPFLGGGHNSEAPVGAQGGTRE*LLAHAP
Trigger: TGGAGCATGTGCAAGGAGGCACTCTCTGGTCCCACC...CTGGGCTCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CAGAGCAGGCTTTATTGGGGCCGTGTAAACCCCAGGGAGAGGCAGGACGTGGACCCAGAATGTCGGGAGTaGGCCTGGGAGAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: QSRLYWGRVNPRERQDVDPECRE*AWESRW
Trigger: CCACCTGCTCTCCCAGGCGCACTCCCGACATTCTGG...GTCCACGTCCTGCCTCTCCCTGGGGTTTACACGGCCCCAATAAAGCCTGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp AGTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGCCCACTGCTTCACCTaGTCCTCTCTCACACTCCAG +
Preference number: 4 (lower is better)
Translates to: SGSPAGQTVPSIPRPKPAAHCFT*SSLTLQ
Trigger: CTGGAGTGTGAGAGAGGAGCAGGTGAAGCAGTGGGC...AGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGAGGAGGCCCACTGCTTCACCTaGTCCTCTCTCACACTCCAG +
Preference number: 4 (lower is better)
Translates to: PKPADRGPALGWVSGKEEAHCFT*SSLTLQ
Trigger: CTGGAGTGTGAGAGAGGAGCAGGTGAAGCAGTGGGC...CTCCTCCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp AGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCCGGCACAGCACCCCCTaGTCGTGCAGCGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RGRTWTTESHVQAALSLVRHSTP*SCSASS
Trigger: GCTGGAGGCGCTGCACGAGCAGGGGGTGCTGTGCCG...GACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp AGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGCGGGTAGGCTCGAACTaGAGCAGCTCAGTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: RQCPPFLAQSPLIEGQPWRVGSN*SSSVSR
Trigger: TCTGCTGACTGAGCTGCTGCAGTTCGAGCCTACCCG...CCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000553789.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp TTTCCCAGGTCGGTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCAACCTCACAGTAGGGTaGAGCAGGTGGTCAACAGCT +
Preference number: 4 (lower is better)
Translates to: FPRSVPRPGDRVNPERSPNLTVG*SRWSTA
Trigger: AGCTGTTGACCACCTGCTGCACCCTACTGTGAGGTT...GGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGACCGACCTGGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR GCA 90 bp TCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGGAGCCTTCCAACCTaGCCCAATGAGCCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: SIPRPKPADRGPALGWVSGSLPT*PNEPWS
Trigger: TGACCACGGCTCATTGGGGCAGGTTGGAAGGCTCCC...TGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp CCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTGTCTGCTGAGCTCTTaGAGTGAGGCCATCCCTCTG +
Preference number: 4 (lower is better)
Translates to: PSIPRPKPADRGPALGWVCLLSS*SEAIPL
Trigger: CAGAGGGATGGCCTCACTGCAAGAGCTCAGCAGACA...CACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp GCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGCCCAGCTGTCTGCTGAGCTCTTaGAGTGAGGCCATCCCTCTG +
Preference number: 4 (lower is better)
Translates to: AGPSWVVAIILRPQWEPSCLLSS*SEAIPL
Trigger: CAGAGGGATGGCCTCACTGCAAGAGCTCAGCAGACA...GCTGGGCTCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp GACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCCGGGTAGGCTCGAACTaGAGCAGCTTCCTCAGGCTA +
Preference number: 4 (lower is better)
Translates to: DRQCPPFLAQSPLIEGQPRVGSN*SSFLRL
Trigger: TAGCCTGAGGAAGCTGCTGCAGTTCGAGCCTACCCG...GGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553315.1
CDS-3UTR GCA 90 bp CCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCGGGTAGGCTCGAACTaGAGCAGCATTCCCGTCAGC +
Preference number: 4 (lower is better)
Translates to: PAGQTVPSIPRPKPADRGRVGSN*SSIPVS
Trigger: GCTGACGGGAATGCTGCTGCAGTTCGAGCCTACCCG...CCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553971.5
CDS-3UTR GCA 90 bp CATGAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTCGCGCCGCGGGCCGCTaGTTTCCGGCATCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: HEVTVGSDMVNSQGLRGSRAAGR*FPASSV
Trigger: CACGCTGGATGCCGGAAAGCAGCGGCCCGCGGCGCG...ACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555647.5
CDS-3UTR CCA 90 bp TCTGACAGTTGGGCCTTCAGAGCCAGGCACGTGGACCGTGTCAGAAGCGCCACCGTCCTGAGGTCAGTGTaGTCAGCGAGTGAGGACCCC +
Preference number: 4 (lower is better)
Translates to: SDSWAFRARHVDRVRSATVLRSV*SASEDP
Trigger: GGGGTCCTCACTCGCTGACCACACTGACCTCAGGAC...GGTGGCGCTTCTGACACGGTCCACGTGCCTGGCTCTGAAGGCCCAACTGTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CCAGTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGTCTCCGTGGACCGGATaGATTGCCCCTGCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: PVGAQQDRQCPPFLAQSPSPWTG*IAPAVF
Trigger: AAACACAGCAGGGGCAATCCATCCGGTCCACGGAGA...CGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp AGGAGCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGCCTACGCATTCAGCACATaGAGGCCACACACGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RSWPFLGGGHNSEAPVGAYAFST*RPHTLG
Trigger: GCCCAGCGTGTGTGGCCTCCATGTGCTGAATGCGTA...GGCTCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp TGCTGGCAGGGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTGCTCCAGGCCGGGGCTaGGCAGGCACTCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: CWQGGAEGKTLVEISQVGAPGRG*AGTHRP
Trigger: TGGCCTGTGAGTGCCTGCCCAGCCCCGGCCTGGAGC...ACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCCCTGCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp AGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCAACCCGCGCTGGGGCTaGCTCCACTGCTCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: RGRTWTTESHVQAALSLVNPRWG*LHCSAA
Trigger: GGCCGCTGAGCAGTGGAGCCAGCCCCAGCGCGGGTT...GACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCACGCCCCGGTGACAGGGAGGGCGATTCTGTCCTaGCCAGGGGCATGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: GQNSSGNFPGRSHAPVTGRAILS*PGAWPE
Trigger: CTCAGGCCATGCCCCTGGCCAGGACAGAATCGCCCT...CCCTGTCACCGGGGCGTGGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp TCTGACAGTTGGGCCTTCAGAGCCAGGCACGTGGACCGTGTCAGAAGCGCCACCAGGAGCCAGAGGTGCTaGTCCTGGCTGTGGGTTCAC +
Preference number: 4 (lower is better)
Translates to: SDSWAFRARHVDRVRSATRSQRC*SWLWVH
Trigger: GTGAACCCACAGCCAGGACCAGCACCTCTGGCTCCT...GGTGGCGCTTCTGACACGGTCCACGTGCCTGGCTCTGAAGGCCCAACTGTCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GTGGGGCACAACATGGCAGTGAGTGAGTCACAGAACCTCACAGTAGGGTGCAGCCTCTCACACTCCAGGTaGCCCTGCCACAGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: VGHNMAVSESQNLTVGCSLSHSR*PCHSPG
Trigger: GCCGGGGCTGTGGCAGGGCCACCTGGAGTGTGAGAG...GCTGCACCCTACTGTGAGGTTCTGTGACTCACTCACTGCCATGTTGTGCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CTCCCCACCATGAGTGAGGGGTCTGGTCTGACAGTTGGGCCTTCAGAGCCAGGCAGCTGGAGCTGGGTGTaGGCCTGGATTCCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: LPTMSEGSGLTVGPSEPGSWSWV*AWIPEG
Trigger: CCCTTCAGGAATCCAGGCCCACACCCAGCTCCAGCT...GCCTGGCTCTGAAGGCCCAACTGTCAGACCAGACCCCTCACTCATGGTGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CTCCCAAGTCTGAAATCACAAGATAGGGGGCATGGTCAGGAATCGGGGGTGGGGCAGCAGAGAGGCCGCTaGGCGACTGAGCCACTCGGG +
Preference number: 4 (lower is better)
Translates to: LPSLKSQDRGHGQESGVGQQRGR*ATEPLG
Trigger: CCCGAGTGGCTCAGTCGCCCAGCGGCCTCTCTGCTG...CCCCACCCCCGATTCCTGACCATGCCCCCTATCTTGTGATTTCAGACTTGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp AGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGGAGCTGGCCCTTCCTaGGTGGTGGCCATAATTCTG +
Preference number: 4 (lower is better)
Translates to: RQCPPFLAQSPLIEGQPWGAGPS*VVAIIL
Trigger: CAGAATTATGGCCACCACCCAGGAAGGGCCAGCTCC...CCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGAGCTGGCCCTTCCTaGGTGGTGGCCATAATTCTG +
Preference number: 4 (lower is better)
Translates to: QTVPSIPRPKPADRGPALGAGPS*VVAIIL
Trigger: CAGAATTATGGCCACCACCCAGGAAGGGCCAGCTCC...CAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTGGAGGCAATGGAGCTGGCCCTTCCTaGGTGGTGGCCATAATTCTG +
Preference number: 4 (lower is better)
Translates to: PRPGDRVNPERSPQTGGNGAGPS*VVAIIL
Trigger: CAGAATTATGGCCACCACCCAGGAAGGGCCAGCTCC...ATTGCCTCCAGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GCCCCAGTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCTAGCCAGGACAGTCTaGTTTGGGTCCACTGAGCCA +
Preference number: 4 (lower is better)
Translates to: APVGAQQDRQCPPFLAQSLARTV*FGSTEP
Trigger: TGGCTCAGTGGACCCAAACCAGACTGTCCTGGCTAG...GCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCACTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGAGGAGTCCCTGCACAACAGATaGCATCCCTGCTTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PKPADRGPALGWVSGKEESLHNR*HPCFWA
Trigger: GGCCCAGAAGCAGGGATGCCATCTGTTGTGCAGGGA...CTCCTCCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp TCCCCTGAGGCCCACATGGCATGCTGCTCACCACCAGCCCTGCGTCCTACTTCCTCCCTGCACAACAGATaGCATCCCTGCTTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SPEAHMACCSPPALRPTSSLHNR*HPCFWA
Trigger: GGCCCAGAAGCAGGGATGCCATCTGTTGTGCAGGGA...GGAAGTAGGACGCAGGGCTGGTGGTGAGCAGCATGCCATGTGGGCCTCAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp CGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGAGCAGAGCAGGCTTTATTaGGGCCGTGTAAACCCCAGG +
Preference number: 4 (lower is better)
Translates to: RPKPADRGPALGWVSGKEQSRLY*GRVNPR
Trigger: CCTGGGGTTTACACGGCCCCAATAAAGCCTGCTCTG...CTCCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp AGGTCGGTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTAGCAGAGCACAGAGCTaGGCTGTAAGAACTGCCCGA +
Preference number: 4 (lower is better)
Translates to: RSVPRPGDRVNPERSPQTSRAQS*AVRTAR
Trigger: TCGGGCAGTTCTTACAGCCCAGCTCTGTGCTCTGCT...AGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGACCGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GGAGCCCCCAAACTGGAGGCAATTGTCTTTGAGGTAACCACTCACCCCAGCTTTGGAGCCTCAGGCTGCTaGAACCCGCGCTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GAPKLEAIVFEVTTHPSFGASGC*NPRWGW
Trigger: CCAGCCCCAGCGCGGGTTTCAGCAGCCTGAGGCTCC...AAAGCTGGGGTGAGTGGTTACCTCAAAGACAATTGCCTCCAGTTTGGGGGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GGAGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGGGACTCCGTGTGGGATaGTGGTCAGCCGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: GEAGRGPQRVMYRLRFHLGLRVG*WSAAPC
Trigger: GCAGGGAGCGGCTGACCATCATCCCACACGGAGTCC...CAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGAGCGCTCACAAAGTACCTaGGCAGCTTCGTCATGTAGG +
Preference number: 4 (lower is better)
Translates to: RPKPADRGPALGWVSGKERSQST*AASSCR
Trigger: CCTACATGACGAAGCTGCTCAGGTACTTTGTGAGCG...CTCCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000553789.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGCTGGGGCTCCACCTCTaGCCACTGGCCAAAATATGT +
Preference number: 4 (lower is better)
Translates to: QTVPSIPRPKPADRGPALLGLHL*PLAKIC
Trigger: ACATATTTTGGCCAGTGGTCAGAGGTGGAGCCCCAG...CAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553789.5
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTCTCCAGAGATGTCCTaGGTGGGGCACAACATGGCA +
Preference number: 4 (lower is better)
Translates to: DRQCPPFLAQSPLIEGQPSPEMS*VGHNMA
Trigger: TGCCATGTTGTGCCCCACTCAGGACATCTCTGGAGA...GGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp TCTGACAGTTGGGCCTTCAGAGCCAGGCACGTGGACCGTGTCAGAAGCGCCACCGGCCTACTCGCTGTGTaGCTAAGAGGACTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: SDSWAFRARHVDRVRSATGLLAV*LRGLAR
Trigger: CCTGGCTAGTCCTCTTAGTCACACAGCGAGTAGGCC...GGTGGCGCTTCTGACACGGTCCACGTGCCTGGCTCTGAAGGCCCAACTGTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGGGGGAGGAGGACTCTTaGTTCTGGTTTCAGACTTGC +
Preference number: 4 (lower is better)
Translates to: PSIPRPKPADRGPALGWVGEEDS*FWFQTC
Trigger: GCAAGTCTGAAACCAGAATCAAGAGTCCTCCTCCCC...CACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp TCTGACAGTTGGGCCTTCAGAGCCAGGCACGTGGACCGTGTCAGAAGCGCCACCCTGGCAGGGAGGAGCTaGGGGCAAAACTCTAGTGGA +
Preference number: 4 (lower is better)
Translates to: SDSWAFRARHVDRVRSATLAGRS*GQNSSG
Trigger: TCCACTAGAGTTTTGCCCTCAGCTCCTCCCTGCCAG...GGTGGCGCTTCTGACACGGTCCACGTGCCTGGCTCTGAAGGCCCAACTGTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCCCCCAAGCTCGCTCTTaGCTTCACTCTGGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: DRQCPPFLAQSPLIEGQPPQARS*LHSGAS
Trigger: AGAAGCTCCAGAGTGAAGTCAAGAGCGAGCTTGGGG...GGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTC
61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR TCA 90 bp TCCAGGAGCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAAGAGTCCCTGTCTGCTaGGCTCTTGCAGTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: SRSWPFLGGGHNSEAPVGRVPVC*ALAVRP
Trigger: TGGCCTCACTGCAAGAGCTCAGCAGACAGGGACTCT...TCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGCTCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR TCA 90 bp TCTGACAGTTGGGCCTTCAGAGCCAGGCACGTGGACCGTGTCAGAAGCGCCACCGTGCCCCACCTTCCTTaGGCCTGTCAAGCCATACTC +
Preference number: 4 (lower is better)
Translates to: SDSWAFRARHVDRVRSATVPHLP*ACQAIL
Trigger: GAGTATGGCTTGACAGGCTCAAGGAAGGTGGGGCAC...GGTGGCGCTTCTGACACGGTCCACGTGCCTGGCTCTGAAGGCCCAACTGTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR TCA 90 bp TGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGAAGGTTTTATGCAGATaGAGCCTCCAGCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: CPPFLAQSPLIEGQPWVGKVLCR*SLQPAG
Trigger: GCCTGCTGGCTGGAGGCTTCATCTGCATAAAACCTT...CCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp GCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGCCCAGCCGGATGGATTGCCCCTaGTGTGTTTTGTTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: AGPSWVVAIILRPQWEPSRMDCP*CVLFPW
Trigger: CCAAGGGAACAAAACACAGCAGGGGCAATCCATCCG...GCTGGGCTCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GCCCCAGTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCGGATGGATTGCCCCTaGTGTGTTTTGTTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: APVGAQQDRQCPPFLAQSRMDCP*CVLFPW
Trigger: CCAAGGGAACAAAACACAGCAGGGGCAATCCATCCG...GCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCACTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGGTGGACCGGATGGATTaGCCCTGCTGTGTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: LAQSPLIEGQPWVGCQARVDRMD*PCCVLF
Trigger: GAACAAAACACAGCAGGGGCAATCCATCCGGTCCAC...CCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTCCTGATTGGGGCTGGCTCCACTaGTCAGCGGCCGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: VTVGSDMVNSQGLRGSPDWGWLH*SAAAAG
Trigger: ACCTGCAGCGGCCGCTGAGCAGTGGAGCCAGCCCCA...ATCAGGACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCGTGCCTCCTTGCACATaGTCCAGGTGCAGGAAGATG +
Preference number: 4 (lower is better)
Translates to: GQTVPSIPRPKPADRGPAVPPCT*SRCRKM
Trigger: CATCTTCCTGCACCTGGAGCATGTGCAAGGAGGCAC...GGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp AGTATAATGAGGAATGGCTGGCTCCCTCTTCCCACCATGGCCCGAACTAGCGTTCGGCACAGCACCCCCTaGTCGTGCAGCGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SIMRNGWLPLPTMARTSVRHSTP*SCSASS
Trigger: GCTGGAGGCGCTGCACGAGCAGGGGGTGCTGTGCCG...AACGCTAGTTCGGGCCATGGTGGGAAGAGGGAGCCAGCCATTCCTCATTATACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp CAGAGCAGGCTTTATTGGGGCCGTGTAAACCCCAGGGAGAGGCAGGACGTGGACGAGCCGGATGTGACCTaGCTGGTCCAGGAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: QSRLYWGRVNPRERQDVDEPDVT*LVQEQV
Trigger: AACCTGCTCCTGGACCAGGCAGGTCACATCCGGCTC...GTCCACGTCCTGCCTCTCCCTGGGGTTTACACGGCCCCAATAAAGCCTGCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp TCCAGGAGCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGACGGGTAGGCTCGAACTaGAGCAGCTCAGTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: SRSWPFLGGGHNSEAPVGRVGSN*SSSVSR
Trigger: TCTGCTGACTGAGCTGCTGCAGTTCGAGCCTACCCG...TCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGCTCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp TCTGACAGTTGGGCCTTCAGAGCCAGGCACGTGGACCGTGTCAGAAGCGCCACCCGGGTAGGCTCGAACTaGAGCAGCTCAGTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: SDSWAFRARHVDRVRSATRVGSN*SSSVSR
Trigger: TCTGCTGACTGAGCTGCTGCAGTTCGAGCCTACCCG...GGTGGCGCTTCTGACACGGTCCACGTGCCTGGCTCTGAAGGCCCAACTGTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GAGCTTCTACAGGGGAGCCTTCCAACCTGCCCCAATGAGCCGTGGTCATTGCATCCAGACCAGGCCAGCTaGTTCCGTCACCCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: ELLQGSLPTCPNEPWSLHPDQAS*FRHPLC
Trigger: GCAGAGCGGGTGACGGAAGCAGCTGGCCTGGTCTGG...ATGCAATGACCACGGCTCATTGGGGCAGGTTGGAAGGCTCCCCTGTAGAAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp CTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGACAGCTCAGCGCCAGTaGCACAGAAGGCAACCTTTA +
Preference number: 4 (lower is better)
Translates to: LAQSPLIEGQPWVGCQARTAQRQ*HRRQPL
Trigger: TAAAGGTTGCCTTCTGTGGCACTGGCGCTGAGCTGT...CCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGCCCAGCAACCTCACAGTAGGGTaGAGCAGGTGGTCAACAGCT +
Preference number: 4 (lower is better)
Translates to: AGPSWVVAIILRPQWEPSNLTVG*SRWSTA
Trigger: AGCTGTTGACCACCTGCTGCACCCTACTGTGAGGTT...GCTGGGCTCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGTACCTCATCCCTCCCTaGACAACAGATGGCATCCCT +
Preference number: 4 (lower is better)
Translates to: LAQSPLIEGQPWVGCQARYLIPP*TTDGIP
Trigger: AGGGATGCCATCTGTTGTGCAGGGAGGGATGAGGTA...CCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGAGGTTTAGCACTTCTCCGTaGACCGGATGGATTGCCCCT +
Preference number: 4 (lower is better)
Translates to: AQSPLIEGQPWVGCQARRFSTSP*TGWIAP
Trigger: AGGGGCAATCCATCCGGTCCACGGAGAAGTGCTAAA...CCTCCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGTTTAGCACTTCTCCGTaGACCGGATGGATTGCCCCT +
Preference number: 4 (lower is better)
Translates to: VGAQQDRQCPPFLAQSPLFSTSP*TGWIAP
Trigger: AGGGGCAATCCATCCGGTCCACGGAGAAGTGCTAAA...CAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp TGGCAGGGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCAGGCCACCAGGCTCATaGCTGCCCTGCAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: WQGGAEGKTLVEISQVGPRPPGS*LPCSWD
Trigger: GTCCCAGCTGCAGGGCAGCCATGAGCCTGGTGGCCT...GGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCCCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CCACTCACCCCAGCTTTTCAGAGACCAGAGGCAAGACATTTCTGGCTAAGAGCCGCTCCAGGCCGGGGCTaGGCAGGCACTCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: PLTPAFQRPEARHFWLRAAPGRG*AGTHRP
Trigger: TGGCCTGTGAGTGCCTGCCCAGCCCCGGCCTGGAGC...GGCTCTTAGCCAGAAATGTCTTGCCTCTGGTCTCTGAAAAGCTGGGGTGAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CATGAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTGCTCCAGGCCGGGGCTaGGCAGGCACTCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: HEVTVGSDMVNSQGLRGSAPGRG*AGTHRP
Trigger: TGGCCTGTGAGTGCCTGCCCAGCCCCGGCCTGGAGC...ACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGAGCGGCCGCTGCAGGTaGCAGTTGAAGATCTCCTCT +
Preference number: 4 (lower is better)
Translates to: PAGQTVPSIPRPKPADRGSGRCR*QLKISS
Trigger: AGAGGAGATCTTCAACTGCCACCTGCAGCGGCCGCT...CCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CAAGCCTTGACTGCCCCCACCTCCAGCTTTTCCAGGAGCTGGCCCTTCCTGGGTAGCGGCCGCTGCAGGTaGCAGTTGAAGATCTCCTCT +
Preference number: 4 (lower is better)
Translates to: QALTAPTSSFSRSWPFLGSGRCR*QLKISS
Trigger: AGAGGAGATCTTCAACTGCCACCTGCAGCGGCCGCT...ACCCAGGAAGGGCCAGCTCCTGGAAAAGCTGGAGGTGGGGGCAGTCAAGGCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGCCCAGCTCACCATGTGGCACCTaGGTAGGCTCTTCACCACAA +
Preference number: 4 (lower is better)
Translates to: AGPSWVVAIILRPQWEPSSPCGT*VGSSPQ
Trigger: TTGTGGTGAAGAGCCTACCCAGGTGCCACATGGTGA...GCTGGGCTCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CAGAGCAGGCTTTATTGGGGCCGTGTAAACCCCAGGGAGAGGCAGGACGTGGACGTAGGGGACTCCGTGTaGGATGATGGTCAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: QSRLYWGRVNPRERQDVDVGDSV*DDGQPL
Trigger: GAGCGGCTGACCATCATCCCACACGGAGTCCCCTAC...GTCCACGTCCTGCCTCTCCCTGGGGTTTACACGGCCCCAATAAAGCCTGCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGCCCAGCCCAGGTGCAGGAAGATaGAGTCCTCGCTCACAAAGT +
Preference number: 4 (lower is better)
Translates to: AGPSWVVAIILRPQWEPSPGAGR*SPRSQS
Trigger: ACTTTGTGAGCGAGGACTCCATCTTCCTGCACCTGG...GCTGGGCTCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGCCAGGTGCAGGAAGATaGAGTCCTCGCTCACAAAGT +
Preference number: 4 (lower is better)
Translates to: LAQSPLIEGQPWVGCQARPGAGR*SPRSQS
Trigger: ACTTTGTGAGCGAGGACTCCATCTTCCTGCACCTGG...CCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000553789.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGCCAGGTGCAGGAAGATaGAGTCCTCGCTCACAAAGT +
Preference number: 4 (lower is better)
Translates to: VGAQQDRQCPPFLAQSPLPGAGR*SPRSQS
Trigger: ACTTTGTGAGCGAGGACTCCATCTTCCTGCACCTGG...CAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCACGCCCGCCTGGGAGAGCAGGTaGGACCAGAGAGTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GGAEGKTLVEISQVGPTPAWESR*DQRVPP
Trigger: AGGAGGCACTCTCTGGTCCCACCTGCTCTCCCAGGC...GGGCGTGGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp TCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGCCTTCATCCTCTCCTaGGTAGAGCCAGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: SIPRPKPADRGPALGWVSAFILS*VEPELS
Trigger: GCTCAGCTCTGGCTCTACCCAGGAGAGGATGAAGGC...TGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGTCCACCTCTGACCACTaGCCAAAATATGTGAGCCGG +
Preference number: 4 (lower is better)
Translates to: PRPKPADRGPALGWVSGKSTSDH*PKYVSR
Trigger: CCGGCTCACATATTTTGGCCAGTGGTCAGAGGTGGA...CTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553789.5
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGAGGTCCACCTCTGACCACTaGCCAAAATATGTGAGCCGG +
Preference number: 4 (lower is better)
Translates to: AQSPLIEGQPWVGCQARRSTSDH*PKYVSR
Trigger: CCGGCTCACATATTTTGGCCAGTGGTCAGAGGTGGA...CCTCCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553789.5
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp AGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGAATCCCACCCACCTCTaGGGCGCTGTAGAGATTGTC +
Preference number: 4 (lower is better)
Translates to: RQCPPFLAQSPLIEGQPWNPTHL*GAVEIV
Trigger: GACAATCTCTACAGCGCCCCAGAGGTGGGTGGGATT...CCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553789.5
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTGGATTCCTGAAGGGTaGCTCTGGGACAGTGCCATT +
Preference number: 4 (lower is better)
Translates to: PSIPRPKPADRGPALGWVWIPEG*LWDSAI
Trigger: AATGGCACTGTCCCAGAGCCACCCTTCAGGAATCCA...CACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000553789.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGAGGTGGATTCCTGAAGGGTaGCTCTGGGACAGTGCCATT +
Preference number: 4 (lower is better)
Translates to: AQSPLIEGQPWVGCQARRWIPEG*LWDSAI
Trigger: AATGGCACTGTCCCAGAGCCACCCTTCAGGAATCCA...CCTCCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000553789.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CAGAGCAGGCTTTATTGGGGCCGTGTAAACCCCAGGGAGAGGCAGGACGTGGACATAGAGGGCCAGCCCTaGGTTGGGTGTCAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: QSRLYWGRVNPRERQDVDIEGQP*VGCQAR
Trigger: CCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTAT...GTCCACGTCCTGCCTCTCCCTGGGGTTTACACGGCCCCAATAAAGCCTGCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGGAGCTGGCCCTTCCTaGGTGGTGGCCATAATTCTG +
Preference number: 4 (lower is better)
Translates to: GAQQDRQCPPFLAQSPLIGAGPS*VVAIIL
Trigger: CAGAATTATGGCCACCACCCAGGAAGGGCCAGCTCC...TATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp TCCAGGAGCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGGAGCTGGCCCTTCCTaGGTGGTGGCCATAATTCTG +
Preference number: 4 (lower is better)
Translates to: SRSWPFLGGGHNSEAPVGGAGPS*VVAIIL
Trigger: CAGAATTATGGCCACCACCCAGGAAGGGCCAGCTCC...TCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGCTCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTAGCCAGGACAGTCTaGTTTGGGTCCACTGAGCCA +
Preference number: 4 (lower is better)
Translates to: GQTVPSIPRPKPADRGPALARTV*FGSTEP
Trigger: TGGCTCAGTGGACCCAAACCAGACTGTCCTGGCTAG...GGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp AGGTCGGTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTACGAACAGCTTCTGGTaGAAGAGGCCTACTCGCTGT +
Preference number: 4 (lower is better)
Translates to: RSVPRPGDRVNPERSPQTTNSFW*KRPTRC
Trigger: ACAGCGAGTAGGCCTCTTCCACCAGAAGCTGTTCGT...AGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGACCGACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CTCCCCACCATGAGTGAGGGGTCTGGTCTGACAGTTGGGCCTTCAGAGCCAGGCCCCACACAGGCCCACTaGGGAGGAGGACTCTTGATT +
Preference number: 4 (lower is better)
Translates to: LPTMSEGSGLTVGPSEPGPTQAH*GGGLLI
Trigger: AATCAAGAGTCCTCCTCCCCAGTGGGCCTGTGTGGG...GCCTGGCTCTGAAGGCCCAACTGTCAGACCAGACCCCTCACTCATGGTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp TCTGACAGTTGGGCCTTCAGAGCCAGGCACGTGGACCGTGTCAGAAGCGCCACCCCCACACAGGCCCACTaGGGAGGAGGACTCTTGATT +
Preference number: 4 (lower is better)
Translates to: SDSWAFRARHVDRVRSATPTQAH*GGGLLI
Trigger: AATCAAGAGTCCTCCTCCCCAGTGGGCCTGTGTGGG...GGTGGCGCTTCTGACACGGTCCACGTGCCTGGCTCTGAAGGCCCAACTGTCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCCAGAGCAGGCTTTATTaGGGCCGTGTAAACCCCAGG +
Preference number: 4 (lower is better)
Translates to: DRQCPPFLAQSPLIEGQPQSRLY*GRVNPR
Trigger: CCTGGGGTTTACACGGCCCCAATAAAGCCTGCTCTG...GGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGCGTGAGTGTACAGGGTaGGTAGCTAACCTAGACTGC +
Preference number: 4 (lower is better)
Translates to: LAQSPLIEGQPWVGCQARRECTG*VANLDC
Trigger: GCAGTCTAGGTTAGCTACCCACCCTGTACACTCACG...CCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp GTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTCCTCATCCAGCTGCACCGCGCTaGGGCTGGCTCCACTGCTCA +
Preference number: 4 (lower is better)
Translates to: VTVGSDMVNSQGLRGSPHPAAPR*GWLHCS
Trigger: TGAGCAGTGGAGCCAGCCCCAGCGCGGTGCAGCTGG...ATGAGGACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555009.5
CDS-3UTR CCA 90 bp CAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGCAGCTGGGACCCTTTaGGGTTTAGCACTTCTCCGT +
Preference number: 4 (lower is better)
Translates to: QTVPSIPRPKPADRGPALAAGTL*GLALLR
Trigger: ACGGAGAAGTGCTAAACCCCAAAGGGTCCCAGCTGC...CAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555647.5
CDS-3UTR TCA 90 bp GGAGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGGCTGCAGGTGGCAGTTaGAGATCTCCTCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: GEAGRGPQRVMYRLRFHLAAGGS*RSPLPA
Trigger: GGCGGGCAGAGGAGATCTTCAACTGCCACCTGCAGC...CAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp AGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCGGACTCCGTGTGGGATaGTGGTCAGCCGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: RGRTWTTESHVQAALSLVGLRVG*WSAAPC
Trigger: GCAGGGAGCGGCTGACCATCATCCCACACGGAGTCC...GACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp AGGAGCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGCCCGCTCACAAAGTACCTaGGCAGCTTCGTCATGTAGG +
Preference number: 4 (lower is better)
Translates to: RSWPFLGGGHNSEAPVGARSQST*AASSCR
Trigger: CCTACATGACGAAGCTGCTCAGGTACTTTGTGAGCG...GGCTCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GGAGCCCCCAAACTGGAGGCAATTGTCTTTGAGGTAACCACTCACCCCAGCTTTAGGGGGCCCAGCGTCTaGGTTCTGGCCAGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: GAPKLEAIVFEVTTHPSFRGPSV*VLASPP
Trigger: AGGAGGGCTGGCCAGAACTCAGACGCTGGGCCCCCT...AAAGCTGGGGTGAGTGGTTACCTCAAAGACAATTGCCTCCAGTTTGGGGGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCCTCAGGAACCCAAGTaGGCCCCCGAGGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: DVDHRESCTGCAFTCLLCPQEPK*APEGAQ
Trigger: CTGGGCCCCCTCGGGGGCTCACTTGGGTTCCTGAGG...ACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp TCTGACAGTTGGGCCTTCAGAGCCAGGCACGTGGACCGTGTCAGAAGCGCCACCCTGGGGCTCCACCTCTaGCCACTGGCCAAAATATGT +
Preference number: 4 (lower is better)
Translates to: SDSWAFRARHVDRVRSATLGLHL*PLAKIC
Trigger: ACATATTTTGGCCAGTGGTCAGAGGTGGAGCCCCAG...GGTGGCGCTTCTGACACGGTCCACGTGCCTGGCTCTGAAGGCCCAACTGTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGAGAACGGGTCTGTTGACTaGTGGGTAGATGGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: RPKPADRGPALGWVSGKENGSVD*WVDGSS
Trigger: GCTTGAACCATCTACCCATCAGTCAACAGACCCGTT...CTCCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGAACGGGTCTGTTGACTaGTGGGTAGATGGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: LAQSPLIEGQPWVGCQARNGSVD*WVDGSS
Trigger: GCTTGAACCATCTACCCATCAGTCAACAGACCCGTT...CCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCGCTCAACGGGTCTGTTaGCTGATGGGTAGATGGTTC +
Preference number: 4 (lower is better)
Translates to: GQTVPSIPRPKPADRGPAAQRVC*LMGRWF
Trigger: GAACCATCTACCCATCAGTCAACAGACCCGTTGAGC...GGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp AGGTCGGTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTCAACCTTTAACATGGTaGGTCCACATGCTCAACGGG +
Preference number: 4 (lower is better)
Translates to: RSVPRPGDRVNPERSPQTQPLTW*VHMLNG
Trigger: CCCGTTGAGCATGTGGACTCACCATGTTAAAGGTTG...AGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGACCGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGAGCAACATGGCAGTGAGTaGGTCACAGAACCTCACAGT +
Preference number: 4 (lower is better)
Translates to: RPKPADRGPALGWVSGKEQHGSE*VTEPHS
Trigger: ACTGTGAGGTTCTGTGACTCACTCACTGCCATGTTG...CTCCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGAGGAGGGCACAACATGGCAGTaGGTGAGTCACAGAACCTCA +
Preference number: 4 (lower is better)
Translates to: PKPADRGPALGWVSGKEEGTTWQ*VSHRTS
Trigger: TGAGGTTCTGTGACTCACTCACTGCCATGTTGTGCC...CTCCTCCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGAGGAGTGGATCAGTGTCCTaGGATGAGTCTCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: AQSPLIEGQPWVGCQARRSGSVS*DESPEM
Trigger: CATCTCTGGAGACTCATCTCAGGACACTGATCCACT...CCTCCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGGGGAGGAGGACTCTTaGTTCTGGTTTCAGACTTGC +
Preference number: 4 (lower is better)
Translates to: PFLAQSPLIEGQPWVGCQGEEDS*FWFQTC
Trigger: GCAAGTCTGAAACCAGAATCAAGAGTCCTCCTCCCC...CTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTGGAGGCGGGTCACCATCTTTGTaGAGCCCTTTCAAAACACCA +
Preference number: 4 (lower is better)
Translates to: VPRPGDRVNPERSPQTGGGSPSL*SPFKTP
Trigger: TGGTGTTTTGAAAGGGCTTCACAAAGATGGTGACCC...GCCTCCAGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR TCA 90 bp GCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGCCCAGCACTTTGGAATACCCTTaGCTGAGACGAGGGGTCCAT +
Preference number: 4 (lower is better)
Translates to: AGPSWVVAIILRPQWEPSTLEYP*LRRGVH
Trigger: ATGGACCCCTCGTCTCAGTCAAGGGTATTCCAAAGT...GCTGGGCTCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR TCA 90 bp TGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGACTGGCCAAAATATGTaGGCCGGATGTGACCTTGCA +
Preference number: 4 (lower is better)
Translates to: CPPFLAQSPLIEGQPWVGTGQNM*AGCDLA
Trigger: TGCAAGGTCACATCCGGCTCACATATTTTGGCCAGT...CCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553789.5
ENST00000553971.5
CDS-3UTR GCA 90 bp CCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTGGAGGCAATGTGGACCGGATGGATTaGCCCTGCTGTGTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: PRPGDRVNPERSPQTGGNVDRMD*PCCVLF
Trigger: GAACAAAACACAGCAGGGGCAATCCATCCGGTCCAC...ATTGCCTCCAGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCTGTTGTCTCCTCCCTaGTCCTCCTGTGGGAATCTC +
Preference number: 4 (lower is better)
Translates to: PAGQTVPSIPRPKPADRGLLSPP*SSCGNL
Trigger: GAGATTCCCACAGGAGGAGCAGGGAGGAGACAACAG...CCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp CCACTCACCCCAGCTTTTCAGAGACCAGAGGCAAGACATTTCTGGCTAAGAGCCTGGGGCTGGCTCCACTaGTCAGCGGCCGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: PLTPAFQRPEARHFWLRAWGWLH*SAAAAG
Trigger: ACCTGCAGCGGCCGCTGAGCAGTGGAGCCAGCCCCA...GGCTCTTAGCCAGAAATGTCTTGCCTCTGGTCTCTGAAAAGCTGGGGTGAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CCAAAAGGGCATGAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGTGGGGCTGGCTCCACTaGTCAGCGGCCGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: PKGHEVTVGSDMVNSQGLWGWLH*SAAAAG
Trigger: ACCTGCAGCGGCCGCTGAGCAGTGGAGCCAGCCCCA...CAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTCATGCCCTTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp TGCTGGCAGGGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCTGCAGCCCCTCAGCTaGTCCACGGCAGAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: CWQGGAEGKTLVEISQVGLQPLS*STAELS
Trigger: GCTGAGCTCTGCCGTGGAGCAGCTGAGGGGCTGCAG...ACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCCCTGCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GAGCTTCTACAGGGGAGCCTTCCAACCTGCCCCAATGAGCCGTGGTCATTGCATTGGTCAGCCGCTCCCTaGTCACCATGTGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: ELLQGSLPTCPNEPWSLHWSAAP*SPCGTW
Trigger: CCAGGTGCCACATGGTGAGCAGGGAGCGGCTGACCA...ATGCAATGACCACGGCTCATTGGGGCAGGTTGGAAGGCTCCCCTGTAGAAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp CTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGGTAGATGGTTCAAGCTaGTTAGCAGGGCAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: LAQSPLIEGQPWVGCQARVDGSS*LAGQAL
Trigger: CAAGGCTTGCCCTGCTAAGCAGCTTGAACCATCTAC...CCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGCATGGTGAGTCCACATaGTCAACGGGTCTGTTGACT +
Preference number: 4 (lower is better)
Translates to: VGAQQDRQCPPFLAQSPLHGEST*STGLLT
Trigger: AGTCAACAGACCCGTTGAGCATGTGGACTCACCATG...CAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTGGAGGCAATAACCTCACAGTAGGGTaGAGCAGGTGGTCAACAGCT +
Preference number: 4 (lower is better)
Translates to: PRPGDRVNPERSPQTGGNNLTVG*SRWSTA
Trigger: AGCTGTTGACCACCTGCTGCACCCTACTGTGAGGTT...ATTGCCTCCAGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTGGAGGCAATTACCTCATCCCTCCCTaGACAACAGATGGCATCCCT +
Preference number: 4 (lower is better)
Translates to: PRPGDRVNPERSPQTGGNYLIPP*TTDGIP
Trigger: AGGGATGCCATCTGTTGTGCAGGGAGGGATGAGGTA...ATTGCCTCCAGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTTTTAGCACTTCTCCGTaGACCGGATGGATTGCCCCT +
Preference number: 4 (lower is better)
Translates to: PPFLAQSPLIEGQPWVGCFSTSP*TGWIAP
Trigger: AGGGGCAATCCATCCGGTCCACGGAGAAGTGCTAAA...ACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGTCACCATGTGGCACCTaGGTAGGCTCTTCACCACAA +
Preference number: 4 (lower is better)
Translates to: QTVPSIPRPKPADRGPALSPCGT*VGSSPQ
Trigger: TTGTGGTGAAGAGCCTACCCAGGTGCCACATGGTGA...CAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTCCTTGTCGGGAGTGCGCCTaGGAGAGCAGGTGGGACCAG +
Preference number: 4 (lower is better)
Translates to: EVTVGSDMVNSQGLRGSPCRECA*ESRWDQ
Trigger: CTGGTCCCACCTGCTCTCCCAGGCGCACTCCCGACA...AGGACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp TGCTGGCAGGGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCTTCAGCCTCCCTCTaGGGTCTGGTGGATGGGGCC +
Preference number: 4 (lower is better)
Translates to: CWQGGAEGKTLVEISQVGPSASL*GLVDGA
Trigger: GGCCCCATCCACCAGACCCCAGAGGGAGGCTGAAGG...ACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCCCTGCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp AGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGACAGAGGTGCTGGTCCTaGCTGTGGGTTCACCTTCAG +
Preference number: 4 (lower is better)
Translates to: SPAGQTVPSIPRPKPADRQRCWS*LWVHLQ
Trigger: CTGAAGGTGAACCCACAGCCAGGACCAGCACCTCTG...TCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CATGAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTCTCTCACACTCCAGGTaGCCCTGCCACAGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: HEVTVGSDMVNSQGLRGSLSHSR*PCHSPG
Trigger: GCCGGGGCTGTGGCAGGGCCACCTGGAGTGTGAGAG...ACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp TCCCCTGAGGCCCACATGGCATGCTGCTCACCACCAGCCCTGCGTCCTACTTCCTCCACCTCTGACCACTaGCCAAAATATGTGAGCCGG +
Preference number: 4 (lower is better)
Translates to: SPEAHMACCSPPALRPTSSTSDH*PKYVSR
Trigger: CCGGCTCACATATTTTGGCCAGTGGTCAGAGGTGGA...GGAAGTAGGACGCAGGGCTGGTGGTGAGCAGCATGCCATGTGGGCCTCAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp GACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTCCACCTCTGACCACTaGCCAAAATATGTGAGCCGG +
Preference number: 4 (lower is better)
Translates to: DRQCPPFLAQSPLIEGQPSTSDH*PKYVSR
Trigger: CCGGCTCACATATTTTGGCCAGTGGTCAGAGGTGGA...GGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553789.5
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp TCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCATGCACGAACAGCTTCTaGTGGAAGAGGCCTACTCGC +
Preference number: 4 (lower is better)
Translates to: SIPRPKPADRGPALGWVSCTNSF*WKRPTR
Trigger: GCGAGTAGGCCTCTTCCACCAGAAGCTGTTCGTGCA...TGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp AGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGACCCACACAGGCCCACTaGGGAGGAGGACTCTTGATT +
Preference number: 4 (lower is better)
Translates to: SPAGQTVPSIPRPKPADRPTQAH*GGGLLI
Trigger: AATCAAGAGTCCTCCTCCCCAGTGGGCCTGTGTGGG...TCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CTCCCCACCATGAGTGAGGGGTCTGGTCTGACAGTTGGGCCTTCAGAGCCAGGCCAGAGCAGGCTTTATTaGGGCCGTGTAAACCCCAGG +
Preference number: 4 (lower is better)
Translates to: LPTMSEGSGLTVGPSEPGQSRLY*GRVNPR
Trigger: CCTGGGGTTTACACGGCCCCAATAAAGCCTGCTCTG...GCCTGGCTCTGAAGGCCCAACTGTCAGACCAGACCCCTCACTCATGGTGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp AGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGCCGTGGTCATTGCATaGAAGAAGCGAGAACACCGT +
Preference number: 4 (lower is better)
Translates to: RQCPPFLAQSPLIEGQPWAVVIA*KKREHR
Trigger: ACGGTGTTCTCGCTTCTTCCATGCAATGACCACGGC...CCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp TCCCCTGAGGCCCACATGGCATGCTGCTCACCACCAGCCCTGCGTCCTACTTCCGTCACAGGAGGGAAGTaGGTCCCAGAGAGTAGAACT +
Preference number: 4 (lower is better)
Translates to: SPEAHMACCSPPALRPTSVTGGK*VPESRT
Trigger: AGTTCTACTCTCTGGGACCCACTTCCCTCCTGTGAC...GGAAGTAGGACGCAGGGCTGGTGGTGAGCAGCATGCCATGTGGGCCTCAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR CAA 72 bp GGGAGCCTTCCAACCTGCCCCAATGAGCCGTGGTCATaGCATGGAAGAAGCGAGAACACCGTAGGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: GSLPTCPNEPWS*HGRSENTVGQS
Trigger: GCTCTGGCCTACGGTGTTCTCGCTTCTTCCATGCAATGACCACGGCTCATTGGGGCAGGTTGGAAGGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR TCA 90 bp AGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGCATTCTGATAGTGGTTaGAGGCCGCCTCATAGTCCT +
Preference number: 4 (lower is better)
Translates to: RQCPPFLAQSPLIEGQPWHSDSG*RPPHSP
Trigger: AGGACTATGAGGCGGCCTTCAACCACTATCAGAATG...CCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp AGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCGCTGCAGGTGGCAGTTaGAGATCTCCTCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: RGRTWTTESHVQAALSLVAAGGS*RSPLPA
Trigger: GGCGGGCAGAGGAGATCTTCAACTGCCACCTGCAGC...GACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTAGGGGGCCCAGCGTCTaGGTTCTGGCCAGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: RGPQRVMYRLRFHLSSLSRGPSV*VLASPP
Trigger: AGGAGGGCTGGCCAGAACTCAGACGCTGGGCCCCCT...AGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTCAGTCCTCAGGAACCCAAGTaGGCCCCCGAGGGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: DHRESCTGCAFTCLLCLSPQEPK*APEGAQ
Trigger: CTGGGCCCCCTCGGGGGCTCACTTGGGTTCCTGAGG...ACTGAGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTCCTGCTGACAGGCAGCTCTaGTCCATGCCTCGGCCACAG +
Preference number: 4 (lower is better)
Translates to: EVTVGSDMVNSQGLRGSPADRQL*SMPRPQ
Trigger: CTGTGGCCGAGGCATGGATCAGAGCTGCCTGTCAGC...AGGACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CAAGCCTTGACTGCCCCCACCTCCAGCTTTTCCAGGAGCTGGCCCTTCCTGGGTGGCACAACATGGCAGTaGGTGAGTCACAGAACCTCA +
Preference number: 4 (lower is better)
Translates to: QALTAPTSSFSRSWPFLGGTTWQ*VSHRTS
Trigger: TGAGGTTCTGTGACTCACTCACTGCCATGTTGTGCC...ACCCAGGAAGGGCCAGCTCCTGGAAAAGCTGGAGGTGGGGGCAGTCAAGGCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTGGAGGCAATAGTGGATCAGTGTCCTaGGATGAGTCTCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: PRPGDRVNPERSPQTGGNSGSVS*DESPEM
Trigger: CATCTCTGGAGACTCATCTCAGGACACTGATCCACT...ATTGCCTCCAGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCACGCCCCTGGTTTGGGTCCACTaGGCCAGTGGATCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: GGAEGKTLVEISQVGPTPLVWVH*ASGSVS
Trigger: GGACACTGATCCACTGGCTCAGTGGACCCAAACCAG...GGGCGTGGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTTTGCTCTCCCAAGTCTaGAATCACAAGATAGGGGGC +
Preference number: 4 (lower is better)
Translates to: PPFLAQSPLIEGQPWVGCLLSQV*NHKIGG
Trigger: GCCCCCTATCTTGTGATTTCAGACTTGGGAGAGCAA...ACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp TCCAGGAGCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGGAGGCAATTGTCTTTaGGGTAACCACTCACCCCAG +
Preference number: 4 (lower is better)
Translates to: SRSWPFLGGGHNSEAPVGGGNCL*GNHSPQ
Trigger: CTGGGGTGAGTGGTTACCTCAAAGACAATTGCCTCC...TCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGCTCCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CTGGAGGCAATTGTCTTTGAGGTAACCACTCACCCCAGCTTTTCAGAGACCAGAGCCCCGGTGACAGGGTaGACCCTGAGAGGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: LEAIVFEVTTHPSFSETRAPVTG*TLRGAP
Trigger: GGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGC...TCTGGTCTCTGAAAAGCTGGGGTGAGTGGTTACCTCAAAGACAATTGCCTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CTCCCAAGTCTGAAATCACAAGATAGGGGGCATGGTCAGGAATCGGGGGTGGGGGTGAGGGGTCTGGTCTaGCAGTTGGGCCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: LPSLKSQDRGHGQESGVGVRGLV*QLGLQS
Trigger: GCTCTGAAGGCCCAACTGTCAGACCAGACCCCTCAC...CCCCACCCCCGATTCCTGACCATGCCCCCTATCTTGTGATTTCAGACTTGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCACGCCCTCTCCCCACCATGAGTaGGGGGTCTGGTCTGACAGT +
Preference number: 4 (lower is better)
Translates to: GGAEGKTLVEISQVGPTPSPHHE*GVWSDS
Trigger: ACTGTCAGACCAGACCCCTCACTCATGGTGGGGAGA...GGGCGTGGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR TCA 90 bp TCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCATCTGTCTCAGTCTCCTaGAGAGCCCGAGGAAGTCAA +
Preference number: 4 (lower is better)
Translates to: SIPRPKPADRGPALGWVSSVSVS*RARGSQ
Trigger: TTGACTTCCTCGGGCTCTTCAGGAGACTGAGACAGA...TGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGTCTGTCTCAGTCTCCTaGAGAGCCCGAGGAAGTCAA +
Preference number: 4 (lower is better)
Translates to: PAGQTVPSIPRPKPADRGSVSVS*RARGSQ
Trigger: TTGACTTCCTCGGGCTCTTCAGGAGACTGAGACAGA...CCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CTCCCCACCATGAGTGAGGGGTCTGGTCTGACAGTTGGGCCTTCAGAGCCAGGCTCTGTCTCAGTCTCCTaGAGAGCCCGAGGAAGTCAA +
Preference number: 4 (lower is better)
Translates to: LPTMSEGSGLTVGPSEPGSVSVS*RARGSQ
Trigger: TTGACTTCCTCGGGCTCTTCAGGAGACTGAGACAGA...GCCTGGCTCTGAAGGCCCAACTGTCAGACCAGACCCCTCACTCATGGTGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTACTGGCCAAAATATGTaGGCCGGATGTGACCTTGCA +
Preference number: 4 (lower is better)
Translates to: PPFLAQSPLIEGQPWVGCTGQNM*AGCDLA
Trigger: TGCAAGGTCACATCCGGCTCACATATTTTGGCCAGT...ACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553789.5
ENST00000553971.5
CDS-3UTR GCA 90 bp TCTGACAGTTGGGCCTTCAGAGCCAGGCACGTGGACCGTGTCAGAAGCGCCACCCGGATGGATTGCCCCTaGTGTGTTTTGTTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: SDSWAFRARHVDRVRSATRMDCP*CVLFPW
Trigger: CCAAGGGAACAAAACACAGCAGGGGCAATCCATCCG...GGTGGCGCTTCTGACACGGTCCACGTGCCTGGCTCTGAAGGCCCAACTGTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAAAATGCTGTTCCTCATaGTGTTCCCTCCACCCTGCC +
Preference number: 4 (lower is better)
Translates to: GAQQDRQCPPFLAQSPLIKCCSS*CSLHPA
Trigger: GGCAGGGTGGAGGGAACAGCATGAGGAACAGCATTT...TATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp TCCAGGAGCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAAAATGCTGTTCCTCATaGTGTTCCCTCCACCCTGCC +
Preference number: 4 (lower is better)
Translates to: SRSWPFLGGGHNSEAPVGKCCSS*CSLHPA
Trigger: GGCAGGGTGGAGGGAACAGCATGAGGAACAGCATTT...TCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGCTCCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp GTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTCCTGATGGCTCATGGCTGCCCTaGAGCTGGGACCATGTTGGC +
Preference number: 4 (lower is better)
Translates to: VTVGSDMVNSQGLRGSPDGSWLP*SWDHVG
Trigger: GCCAACATGGTCCCAGCTGCAGGGCAGCCATGAGCC...ATCAGGACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp CCAAAAGGGCATGAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGGGCCAGCCGGATCTaGGTGGCCGCATCCACCAGA +
Preference number: 4 (lower is better)
Translates to: PKGHEVTVGSDMVNSQGLRASRI*VAASTR
Trigger: TCTGGTGGATGCGGCCACGCAGATCCGGCTGGCCCT...CAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTCATGCCCTTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp TCCAGGAGCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGTTGAAGATCTCCTCTaGCCGCCGCAGGTATTTGGT +
Preference number: 4 (lower is better)
Translates to: SRSWPFLGGGHNSEAPVGVEDLL*PPQVFG
Trigger: ACCAAATACCTGCGGCGGGCAGAGGAGATCTTCAAC...TCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGCTCCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GGAGCCCCCAAACTGGAGGCAATTGTCTTTGAGGTAACCACTCACCCCAGCTTTCGGCAGAGCTCAGCGTaGGAATGGGCCGGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: GAPKLEAIVFEVTTHPSFRQSSA*EWAGAS
Trigger: TGAGGCTCCGGCCCATTCGCACGCTGAGCTCTGCCG...AAAGCTGGGGTGAGTGGTTACCTCAAAGACAATTGCCTCCAGTTTGGGGGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp AGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTCAGTCTCCTGCGGCACAGCACCCCCTaGTCGTGCAGCGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RESCTGCAFTCLLCLSLLRHSTP*SCSASS
Trigger: GCTGGAGGCGCTGCACGAGCAGGGGGTGCTGTGCCG...CAGGAGACTGAGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGCATGGTGAGTCCACATaGTCAACGGGTCTGTTGACT +
Preference number: 4 (lower is better)
Translates to: PFLAQSPLIEGQPWVGCQHGEST*STGLLT
Trigger: AGTCAACAGACCCGTTGAGCATGTGGACTCACCATG...CTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp AGGTCGGTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTTCTTCCCCTCCCTTTTaGTCTCCCAAGTCTGAAATC +
Preference number: 4 (lower is better)
Translates to: RSVPRPGDRVNPERSPQTSSPPF*SPKSEI
Trigger: GATTTCAGACTTGGGAGAGCAAAAGGGAGGGGAAGA...AGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGACCGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CCCAGTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGAGTCATGTACAGGCTaGGCTTTCACTTGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: PSGSPAGQTVPSIPRPKPESCTG*AFTCLL
Trigger: GAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTC...GGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCACTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGCCCAGCGAGTCATGTACAGGCTaGGCTTTCACTTGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: AGPSWVVAIILRPQWEPSESCTG*AFTCLL
Trigger: GAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTC...GCTGGGCTCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CCAGTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGATGAGCCGTGGTCATTaGATGGAAGAAGCGAGAACA +
Preference number: 4 (lower is better)
Translates to: PVGAQQDRQCPPFLAQSPMSRGH*MEEART
Trigger: TGTTCTCGCTTCTTCCATGCAATGACCACGGCTCAT...CGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp AGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTCAGTCTCCTGTTCCGGCATCCAGCGTaGGGGGCCAGCCGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: RESCTGCAFTCLLCLSLLFRHPA*GASRCS
Trigger: GCTGCACCGGCTGGCCCCGCACGCTGGATGCCGGAA...CAGGAGACTGAGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555647.5
CDS-3UTR CCA 90 bp AGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCGTGCAGGTGGCCACCTaGGGCCTTTGGAAGGTCCGA +
Preference number: 4 (lower is better)
Translates to: RGRTWTTESHVQAALSLVVQVAT*GLWKVR
Trigger: TCGGACCTTCCAAAGGCCCCAGGTGGCCACCTGCAC...GACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp TCTGACAGTTGGGCCTTCAGAGCCAGGCACGTGGACCGTGTCAGAAGCGCCACCTCCACCTCTGACCACTaGCCAAAATATGTGAGCCGG +
Preference number: 4 (lower is better)
Translates to: SDSWAFRARHVDRVRSATSTSDH*PKYVSR
Trigger: CCGGCTCACATATTTTGGCCAGTGGTCAGAGGTGGA...GGTGGCGCTTCTGACACGGTCCACGTGCCTGGCTCTGAAGGCCCAACTGTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTCAGCAGAGAGGCCGCTaGGCGACTGAGCCACTCGGG +
Preference number: 4 (lower is better)
Translates to: RGPQRVMYRLRFHLSSLSQQRGR*ATEPLG
Trigger: CCCGAGTGGCTCAGTCGCCCAGCGGCCTCTCTGCTG...AGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTGGAGGCACCAGCTTGCTCCATTaGATGGTACTGAAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: VPRPGDRVNPERSPQTGGTSLLH*MVLKKG
Trigger: TCCCTTTTTCAGTACCATCCAATGGAGCAAGCTGGT...GCCTCCAGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CAGAGCAGGCTTTATTGGGGCCGTGTAAACCCCAGGGAGAGGCAGGACGTGGACTGCACGAACAGCTTCTaGTGGAAGAGGCCTACTCGC +
Preference number: 4 (lower is better)
Translates to: QSRLYWGRVNPRERQDVDCTNSF*WKRPTR
Trigger: GCGAGTAGGCCTCTTCCACCAGAAGCTGTTCGTGCA...GTCCACGTCCTGCCTCTCCCTGGGGTTTACACGGCCCCAATAAAGCCTGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CAAGCCTTGACTGCCCCCACCTCCAGCTTTTCCAGGAGCTGGCCCTTCCTGGGTTGCTTCATGAAGCGGTaGTTGGAAGTGGTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: QALTAPTSSFSRSWPFLGCFMKR*LEVVQP
Trigger: AGGCTGGACCACTTCCAACCACCGCTTCATGAAGCA...ACCCAGGAAGGGCCAGCTCCTGGAAAAGCTGGAGGTGGGGGCAGTCAAGGCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp TTTCCCAGGTCGGTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCTGGATTTGGGAGGAGTaGGGGCATCTCATTTCATTT +
Preference number: 4 (lower is better)
Translates to: FPRSVPRPGDRVNPERSPWIWEE*GHLISF
Trigger: AAATGAAATGAGATGCCCCCACTCCTCCCAAATCCA...GGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGACCGACCTGGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp GGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGGACAGCTCAAGACCTaGGGATGTTGTCATAGGCAG +
Preference number: 4 (lower is better)
Translates to: GAQQDRQCPPFLAQSPLIGQLKT*GCCHRQ
Trigger: CTGCCTATGACAACATCCCCAGGTCTTGAGCTGTCC...TATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp GGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCTACAGTGGTTTGGTCTaGAGAGGCAGGACAGCTCAA +
Preference number: 4 (lower is better)
Translates to: GQTVPSIPRPKPADRGPAYSGLV*RGRTAQ
Trigger: TTGAGCTGTCCTGCCTCTCCAGACCAAACCACTGTA...GGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR TCA 90 bp AGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTGCTCCAGGTACACGTaGGCTTGGGACCGTGCTCGT +
Preference number: 4 (lower is better)
Translates to: RGRTWTTESHVQAALSLVCSRYT*AWDRAR
Trigger: ACGAGCACGGTCCCAAGCTCACGTGTACCTGGAGCA...GACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CATGAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTCCAGCCCTCCTAGCTTaGAGGTGCAGGTGGCCACCT +
Preference number: 4 (lower is better)
Translates to: HEVTVGSDMVNSQGLRGSPALLA*RCRWPP
Trigger: AGGTGGCCACCTGCACCTTCAAGCTAGGAGGGCTGG...ACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CCACTCACCCCAGCTTTTCAGAGACCAGAGGCAAGACATTTCTGGCTAAGAGCCGCCGGCCCCATCTGCTaGCAGGCAGCTCTGATCCAT +
Preference number: 4 (lower is better)
Translates to: PLTPAFQRPEARHFWLRAAGPIC*QAALIH
Trigger: ATGGATCAGAGCTGCCTGTCAGCAGATGGGGCCGGC...GGCTCTTAGCCAGAAATGTCTTGCCTCTGGTCTCTGAAAAGCTGGGGTGAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GGAGCCCCCAAACTGGAGGCAATTGTCTTTGAGGTAACCACTCACCCCAGCTTTGTGGGCCTGGATTCCTaGAGGGTGGCTCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: GAPKLEAIVFEVTTHPSFVGLDS*RVALGQ
Trigger: CTGTCCCAGAGCCACCCTTCAGGAATCCAGGCCCAC...AAAGCTGGGGTGAGTGGTTACCTCAAAGACAATTGCCTCCAGTTTGGGGGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp AGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGCTCAACGGGTCTGTTaGCTGATGGGTAGATGGTTC +
Preference number: 4 (lower is better)
Translates to: SPAGQTVPSIPRPKPADRAQRVC*LMGRWF
Trigger: GAACCATCTACCCATCAGTCAACAGACCCGTTGAGC...TCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CAAGCCTTGACTGCCCCCACCTCCAGCTTTTCCAGGAGCTGGCCCTTCCTGGGTCAACCTTTAACATGGTaGGTCCACATGCTCAACGGG +
Preference number: 4 (lower is better)
Translates to: QALTAPTSSFSRSWPFLGQPLTW*VHMLNG
Trigger: CCCGTTGAGCATGTGGACTCACCATGTTAAAGGTTG...ACCCAGGAAGGGCCAGCTCCTGGAAAAGCTGGAGGTGGGGGCAGTCAAGGCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CTCCCCACCATGAGTGAGGGGTCTGGTCTGACAGTTGGGCCTTCAGAGCCAGGCCAACCTTTAACATGGTaGGTCCACATGCTCAACGGG +
Preference number: 4 (lower is better)
Translates to: LPTMSEGSGLTVGPSEPGQPLTW*VHMLNG
Trigger: CCCGTTGAGCATGTGGACTCACCATGTTAAAGGTTG...GCCTGGCTCTGAAGGCCCAACTGTCAGACCAGACCCCTCACTCATGGTGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR TCA 90 bp TCCAGGAGCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGACAACATGGCAGTGAGTaGGTCACAGAACCTCACAGT +
Preference number: 4 (lower is better)
Translates to: SRSWPFLGGGHNSEAPVGQHGSE*VTEPHS
Trigger: ACTGTGAGGTTCTGTGACTCACTCACTGCCATGTTG...TCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGCTCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CTCCCCACCATGAGTGAGGGGTCTGGTCTGACAGTTGGGCCTTCAGAGCCAGGCCAACATGGCAGTGAGTaGGTCACAGAACCTCACAGT +
Preference number: 4 (lower is better)
Translates to: LPTMSEGSGLTVGPSEPGQHGSE*VTEPHS
Trigger: ACTGTGAGGTTCTGTGACTCACTCACTGCCATGTTG...GCCTGGCTCTGAAGGCCCAACTGTCAGACCAGACCCCTCACTCATGGTGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR TCA 90 bp TCTGACAGTTGGGCCTTCAGAGCCAGGCACGTGGACCGTGTCAGAAGCGCCACCAGTGGATCAGTGTCCTaGGATGAGTCTCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: SDSWAFRARHVDRVRSATSGSVS*DESPEM
Trigger: CATCTCTGGAGACTCATCTCAGGACACTGATCCACT...GGTGGCGCTTCTGACACGGTCCACGTGCCTGGCTCTGAAGGCCCAACTGTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CAGAGCAGGCTTTATTGGGGCCGTGTAAACCCCAGGGAGAGGCAGGACGTGGACGGGGAGGAGGACTCTTaGTTCTGGTTTCAGACTTGC +
Preference number: 4 (lower is better)
Translates to: QSRLYWGRVNPRERQDVDGEEDS*FWFQTC
Trigger: GCAAGTCTGAAACCAGAATCAAGAGTCCTCCTCCCC...GTCCACGTCCTGCCTCTCCCTGGGGTTTACACGGCCCCAATAAAGCCTGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTCCTGTGAGGGGTCTGGTCTaGCAGTTGGGCCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: EVTVGSDMVNSQGLRGSPVRGLV*QLGLQS
Trigger: GCTCTGAAGGCCCAACTGTCAGACCAGACCCCTCAC...AGGACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GGAGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCCAACCTGCCCCAATaGGCCGTGGTCATTGCATGG +
Preference number: 4 (lower is better)
Translates to: GEAGRGPQRVMYRLRFHLSNLPQ*AVVIAW
Trigger: CCATGCAATGACCACGGCTCATTGGGGCAGGTTGGA...CAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR TCA 90 bp AGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGGGTCACCATCTTTGTaGAGCCCTTTCAAAACACCA +
Preference number: 4 (lower is better)
Translates to: RQCPPFLAQSPLIEGQPWGSPSL*SPFKTP
Trigger: TGGTGTTTTGAAAGGGCTTCACAAAGATGGTGACCC...CCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR TCA 90 bp AACAGCTTCTGGTGGAAGAGGCCTACTCGCTGTGTGACTAAGAGGACTAGCCAGAGTGTGGTCAGCGAGTaGGGACCCCTCCTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: NSFWWKRPTRCVTKRTSQSVVSE*GPLLEP
Trigger: TGGCTCCAGGAGGGGTCCTCACTCGCTGACCACACT...CTGGCTAGTCCTCTTAGTCACACAGCGAGTAGGCCTCTTCCACCAGAAGCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTAGGGCCAGCCGGATCTaGGTGGCCGCATCCACCAGA +
Preference number: 4 (lower is better)
Translates to: DVDHRESCTGCAFTCLLCRASRI*VAASTR
Trigger: TCTGGTGGATGCGGCCACGCAGATCCGGCTGGCCCT...ACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CAGAGCAGGCTTTATTGGGGCCGTGTAAACCCCAGGGAGAGGCAGGACGTGGACGTTGAAGATCTCCTCTaGCCGCCGCAGGTATTTGGT +
Preference number: 4 (lower is better)
Translates to: QSRLYWGRVNPRERQDVDVEDLL*PPQVFG
Trigger: ACCAAATACCTGCGGCGGGCAGAGGAGATCTTCAAC...GTCCACGTCCTGCCTCTCCCTGGGGTTTACACGGCCCCAATAAAGCCTGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp AGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCCTGCTCAGCGGCCGCTaGAGGTGGCAGTTGAAGATC +
Preference number: 4 (lower is better)
Translates to: RGRTWTTESHVQAALSLVLLSGR*RWQLKI
Trigger: GATCTTCAACTGCCACCTGCAGCGGCCGCTGAGCAG...GACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTGCAGCCCCTCAGCTaGTCCACGGCAGAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: DVDHRESCTGCAFTCLLCLQPLS*STAELS
Trigger: GCTGAGCTCTGCCGTGGAGCAGCTGAGGGGCTGCAG...ACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GAGCTTCTACAGGGGAGCCTTCCAACCTGCCCCAATGAGCCGTGGTCATTGCATGGTGGGACCAGAGAGTaGCTCCTTGCACATGCTCCA +
Preference number: 4 (lower is better)
Translates to: ELLQGSLPTCPNEPWSLHGGTRE*LLAHAP
Trigger: TGGAGCATGTGCAAGGAGGCACTCTCTGGTCCCACC...ATGCAATGACCACGGCTCATTGGGGCAGGTTGGAAGGCTCCCCTGTAGAAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp CTCCCAAGTCTGAAATCACAAGATAGGGGGCATGGTCAGGAATCGGGGGTGGGGATCTCTGCCGCCCACTaGTTCACCTGCTCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: LPSLKSQDRGHGQESGVGISAAH*FTCSSL
Trigger: GAGAGAGGAGCAGGTGAAGCAGTGGGCGGCAGAGAT...CCCCACCCCCGATTCCTGACCATGCCCCCTATCTTGTGATTTCAGACTTGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp TGGCAGGGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCATCTCTGCCGCCCACTaGTTCACCTGCTCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: WQGGAEGKTLVEISQVGPISAAH*FTCSSL
Trigger: GAGAGAGGAGCAGGTGAAGCAGTGGGCGGCAGAGAT...GGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCCCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp TGCTGGCAGGGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCGCTACCAGCATCTCTaGCGCCCACTGCTTCACCTG +
Preference number: 4 (lower is better)
Translates to: CWQGGAEGKTLVEISQVGRYQHL*RPLLHL
Trigger: CAGGTGAAGCAGTGGGCGGCAGAGATGCTGGTAGCG...ACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCCCTGCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GGAGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGCGGGTAGGCTCGAACTaGAGCAGCTCAGTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: GEAGRGPQRVMYRLRFHLRVGSN*SSSVSR
Trigger: TCTGCTGACTGAGCTGCTGCAGTTCGAGCCTACCCG...CAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTCCTGATTTCCGTCACCCGCTCTaGCCTCTTACCCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: VTVGSDMVNSQGLRGSPDFRHPL*PLTPPA
Trigger: AGCTGGTGGGGTAAGAGGGCAGAGCGGGTGACGGAA...ATCAGGACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTCCAGACCAGGCCAGCTaGTTCCGTCACCCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: RGPQRVMYRLRFHLSSLSPDQAS*FRHPLC
Trigger: GCAGAGCGGGTGACGGAAGCAGCTGGCCTGGTCTGG...AGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CAGAGCAGGCTTTATTGGGGCCGTGTAAACCCCAGGGAGAGGCAGGACGTGGACACAGCTCAGCGCCAGTaGCACAGAAGGCAACCTTTA +
Preference number: 4 (lower is better)
Translates to: QSRLYWGRVNPRERQDVDTAQRQ*HRRQPL
Trigger: TAAAGGTTGCCTTCTGTGGCACTGGCGCTGAGCTGT...GTCCACGTCCTGCCTCTCCCTGGGGTTTACACGGCCCCAATAAAGCCTGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GTGGGGCACAACATGGCAGTGAGTGAGTCACAGAACCTCACAGTAGGGTGCAGCAACAGATGGCATCCCTaGTTCTGGGCCTCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: VGHNMAVSESQNLTVGCSNRWHP*FWASPA
Trigger: AGCTGGGGAGGCCCAGAAGCAGGGATGCCATCTGTT...GCTGCACCCTACTGTGAGGTTCTGTGACTCACTCACTGCCATGTTGTGCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGTTCTGGTTTCAGACTTaGTCTAAGGGGCAGACCCAT +
Preference number: 4 (lower is better)
Translates to: QTVPSIPRPKPADRGPALFWFQT*SKGQTH
Trigger: ATGGGTCTGCCCCTTAGAGCAAGTCTGAAACCAGAA...CAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGAGGACACCTTGTCTAAACTaGTTTGGCCTGGAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: AQSPLIEGQPWVGCQARRTPCLN*FGLEAE
Trigger: TTCAGCTTCCAGGCCAAAGCAGTTTAGACAAGGTGT...CCTCCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp AGGAGCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGCCGAGTCATGTACAGGCTaGGCTTTCACTTGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: RSWPFLGGGHNSEAPVGAESCTG*AFTCLL
Trigger: GAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTC...GGCTCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGCCTTGTGGACCAAGATaGTCAAGGTCAATACACATG +
Preference number: 4 (lower is better)
Translates to: PSIPRPKPADRGPALGWVPCGPR*SRSIHM
Trigger: CATGTGTATTGACCTTGAGCATCTTGGTCCACAAGG...CACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp CCCAGTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCCCTTGTGGACCAAGATaGTCAAGGTCAATACACATG +
Preference number: 4 (lower is better)
Translates to: PSGSPAGQTVPSIPRPKPPCGPR*SRSIHM
Trigger: CATGTGTATTGACCTTGAGCATCTTGGTCCACAAGG...GGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCACTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp GTGGGGCACAACATGGCAGTGAGTGAGTCACAGAACCTCACAGTAGGGTGCAGCGGAGGCCACACACGCTaGGCTCAAATGCTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: VGHNMAVSESQNLTVGCSGGHTR*AQMLFL
Trigger: GAGGAACAGCATTTGAGCCCAGCGTGTGTGGCCTCC...GCTGCACCCTACTGTGAGGTTCTGTGACTCACTCACTGCCATGTTGTGCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp AACAGCTTCTGGTGGAAGAGGCCTACTCGCTGTGTGACTAAGAGGACTAGCCAGGCCTGGGAGAGCAGGTaGGACCAGAGAGTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: NSFWWKRPTRCVTKRTSQAWESR*DQRVPP
Trigger: AGGAGGCACTCTCTGGTCCCACCTGCTCTCCCAGGC...CTGGCTAGTCCTCTTAGTCACACAGCGAGTAGGCCTCTTCCACCAGAAGCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GGAGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGGCCTTCATCCTCTCCTaGGTAGAGCCAGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: GEAGRGPQRVMYRLRFHLAFILS*VEPELS
Trigger: GCTCAGCTCTGGCTCTACCCAGGAGAGGATGAAGGC...CAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CCACTCACCCCAGCTTTTCAGAGACCAGAGGCAAGACATTTCTGGCTAAGAGCCAGGGCGATTCTGTCCTaGCCAGGGGCATGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: PLTPAFQRPEARHFWLRARAILS*PGAWPE
Trigger: CTCAGGCCATGCCCCTGGCCAGGACAGAATCGCCCT...GGCTCTTAGCCAGAAATGTCTTGCCTCTGGTCTCTGAAAAGCTGGGGTGAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp TGCTGGCAGGGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTAGGAGCCAGAGGTGCTaGTCCTGGCTGTGGGTTCAC +
Preference number: 4 (lower is better)
Translates to: CWQGGAEGKTLVEISQVGRSQRC*SWLWVH
Trigger: GTGAACCCACAGCCAGGACCAGCACCTCTGGCTCCT...ACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCCCTGCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CATGAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTGCCACCTGGGGCCTTTaGAAGGTCCGAGGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: HEVTVGSDMVNSQGLRGSATWGL*KVRGAR
Trigger: TCTGGCTCCTCGGACCTTCCAAAGGCCCCAGGTGGC...ACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GGAGCCCCCAAACTGGAGGCAATTGTCTTTGAGGTAACCACTCACCCCAGCTTTGTGCAGGTGGCCACCTaGGGCCTTTGGAAGGTCCGA +
Preference number: 4 (lower is better)
Translates to: GAPKLEAIVFEVTTHPSFVQVAT*GLWKVR
Trigger: TCGGACCTTCCAAAGGCCCCAGGTGGCCACCTGCAC...AAAGCTGGGGTGAGTGGTTACCTCAAAGACAATTGCCTCCAGTTTGGGGGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CTGGAGGCAATTGTCTTTGAGGTAACCACTCACCCCAGCTTTTCAGAGACCAGAAGCAGGTTCCCGGGGTaGAGGTCCCGGCACAGCACC +
Preference number: 4 (lower is better)
Translates to: LEAIVFEVTTHPSFSETRSRFPG*RSRHST
Trigger: GGTGCTGTGCCGGGACCTCCACCCCGGGAACCTGCT...TCTGGTCTCTGAAAAGCTGGGGTGAGTGGTTACCTCAAAGACAATTGCCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTCCTCATAGCTGGGTGTGGGCCTaGATTCCTGAAGGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: VTVGSDMVNSQGLRGSPHSWVWA*IPEGWL
Trigger: GAGCCACCCTTCAGGAATCCAGGCCCACACCCAGCT...ATGAGGACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555009.5
CDS-3UTR CCA 90 bp GACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTCAGTAGCCACTCGGGCAGCTaGAGCTGGGTGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: DHRESCTGCAFTCLLCLSSHSGS*SWVWAW
Trigger: CCAGGCCCACACCCAGCTCCAGCTGCCCGAGTGGCT...ACTGAGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CTGGAGGCAATTGTCTTTGAGGTAACCACTCACCCCAGCTTTTCAGAGACCAGACAGCAGAGAGGCCGCTaGGCGACTGAGCCACTCGGG +
Preference number: 4 (lower is better)
Translates to: LEAIVFEVTTHPSFSETRQQRGR*ATEPLG
Trigger: CCCGAGTGGCTCAGTCGCCCAGCGGCCTCTCTGCTG...TCTGGTCTCTGAAAAGCTGGGGTGAGTGGTTACCTCAAAGACAATTGCCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTGGAGGCGTACTGAAAAAGGGATaGGACTTGAGTTTGCTGACA +
Preference number: 4 (lower is better)
Translates to: VPRPGDRVNPERSPQTGGVLKKG*DLSLLT
Trigger: TGTCAGCAAACTCAAGTCCCATCCCTTTTTCAGTAC...GCCTCCAGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CCAGTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGACCAGCTTGCTCCATTaGATGGTACTGAAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: PVGAQQDRQCPPFLAQSPTSLLH*MVLKKG
Trigger: TCCCTTTTTCAGTACCATCCAATGGAGCAAGCTGGT...CGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGACCAGCTTGCTCCATTaGATGGTACTGAAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: PSIPRPKPADRGPALGWVTSLLH*MVLKKG
Trigger: TCCCTTTTTCAGTACCATCCAATGGAGCAAGCTGGT...CACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553789.5
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCACGCCCCGGTGACAGGGACGAACAGCTTCTGGTaGAAGAGGCCTACTCGCTGT +
Preference number: 4 (lower is better)
Translates to: GQNSSGNFPGRSHAPVTGTNSFW*KRPTRC
Trigger: ACAGCGAGTAGGCCTCTTCCACCAGAAGCTGTTCGT...CCCTGTCACCGGGGCGTGGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTGTCCTCTTGCACCCCTaGGGCAGGCTGCCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: RGPQRVMYRLRFHLSSLSVLLHP*GRLPLF
Trigger: GAAGAGGGGCAGCCTGCCCCAGGGGTGCAAGAGGAC...AGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTGGAGGCGTTCCATGCGTTTTGTaGTTTCTTATCCCAAAAGGG +
Preference number: 4 (lower is better)
Translates to: VPRPGDRVNPERSPQTGGVPCVL*FLIPKG
Trigger: CCCTTTTGGGATAAGAAACCACAAAACGCATGGAAC...GCCTCCAGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GCCCCAGTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCGAGGCAAGACATTTCTaGCTAAGAGCCATGGATAGT +
Preference number: 4 (lower is better)
Translates to: APVGAQQDRQCPPFLAQSEARHF*LRAMDS
Trigger: ACTATCCATGGCTCTTAGCCAGAAATGTCTTGCCTC...GCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCACTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp AGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGAGGAGCCCCCAAACTaGAGGCAATTGTCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: SPAGQTVPSIPRPKPADREEPPN*RQLSLR
Trigger: CCTCAAAGACAATTGCCTCCAGTTTGGGGGCTCCTC...TCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCACGCCCCGGTGACAGGGTGCCCCAATGAGCCGTaGTCATTGCATGGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: GQNSSGNFPGRSHAPVTGCPNEP*SLHGRS
Trigger: GCTTCTTCCATGCAATGACCACGGCTCATTGGGGCA...CCCTGTCACCGGGGCGTGGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
3UTR CAA 72 bp AAGAAGCGAGAACACCGTAGGCCAGAGCAGGCTTTATaGGGGCCGTGTAAACCCCAGGGAGAGGCAGGACGT +
Preference number: 4 (lower is better)
Translates to: KKREHRRPEQAL*GPCKPQGEAGR
Trigger: ACGTCCTGCCTCTCCCTGGGGTTTACACGGCCCCAATAAAGCCTGCTCTGGCCTACGGTGTTCTCGCTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR TCA 90 bp GGAGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTTGTTCCCTTGGTCCTaGGGTCAGTGTGGTCAGCGA +
Preference number: 4 (lower is better)
Translates to: GEAGRGPQRVMYRLRFHLLFPWS*GQCGQR
Trigger: TCGCTGACCACACTGACCTCAGGACCAAGGGAACAA...CAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CTGGAGGCAATTGTCTTTGAGGTAACCACTCACCCCAGCTTTTCAGAGACCAGAGCTGCACCTTCTCGATaGCCCCGACCACCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LEAIVFEVTTHPSFSETRAAPSR*PRPPCS
Trigger: GCTGCAGGGTGGTCGGGGTCATCGAGAAGGTGCAGC...TCTGGTCTCTGAAAAGCTGGGGTGAGTGGTTACCTCAAAGACAATTGCCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp AGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAAACGGGTCTGTTGACTaGTGGGTAGATGGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: SPAGQTVPSIPRPKPADRNGSVD*WVDGSS
Trigger: GCTTGAACCATCTACCCATCAGTCAACAGACCCGTT...TCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCACGCCCCGGTGACAGGGCAACATGGCAGTGAGTaGGTCACAGAACCTCACAGT +
Preference number: 4 (lower is better)
Translates to: GQNSSGNFPGRSHAPVTGQHGSE*VTEPHS
Trigger: ACTGTGAGGTTCTGTGACTCACTCACTGCCATGTTG...CCCTGTCACCGGGGCGTGGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR TCA 90 bp TGGCAGGGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCTCTCCAGAGATGTCCTaGGTGGGGCACAACATGGCA +
Preference number: 4 (lower is better)
Translates to: WQGGAEGKTLVEISQVGPSPEMS*VGHNMA
Trigger: TGCCATGTTGTGCCCCACTCAGGACATCTCTGGAGA...GGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCCCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR TCA 90 bp TGCCCCAATGAGCCGTGGTCATTGCATGGAAGAAGCGAGAACACCGTAGGCCAGTCTCCAGAGATGTCCTaGGTGGGGCACAACATGGCA +
Preference number: 4 (lower is better)
Translates to: CPNEPWSLHGRSENTVGQSPEMS*VGHNMA
Trigger: TGCCATGTTGTGCCCCACTCAGGACATCTCTGGAGA...CTGGCCTACGGTGTTCTCGCTTCTTCCATGCAATGACCACGGCTCATTGGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR TCA 90 bp GTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTCCTGATCTGGTTTGGGTCCACTaGGCCAGTGGATCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: VTVGSDMVNSQGLRGSPDLVWVH*ASGSVS
Trigger: GGACACTGATCCACTGGCTCAGTGGACCCAAACCAG...ATCAGGACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTCCTCATGGCCTACTCGCTGTGTaGCTAAGAGGACTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: VTVGSDMVNSQGLRGSPHGLLAV*LRGLAR
Trigger: CCTGGCTAGTCCTCTTAGTCACACAGCGAGTAGGCC...ATGAGGACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555009.5
CDS-3UTR TCA 90 bp GTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTCCTGATGGCCTACTCGCTGTGTaGCTAAGAGGACTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: VTVGSDMVNSQGLRGSPDGLLAV*LRGLAR
Trigger: CCTGGCTAGTCCTCTTAGTCACACAGCGAGTAGGCC...ATCAGGACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR TCA 90 bp TGCTGGCAGGGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTTCTCCCCACCATGAGTaGGGGGTCTGGTCTGACAGT +
Preference number: 4 (lower is better)
Translates to: CWQGGAEGKTLVEISQVGSPHHE*GVWSDS
Trigger: ACTGTCAGACCAGACCCCTCACTCATGGTGGGGAGA...ACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCCCTGCCAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GTGGGGCACAACATGGCAGTGAGTGAGTCACAGAACCTCACAGTAGGGTGCAGCTGCAGGTGGCAGGTGTaGTGGAGTCCAGGCTTAAAC +
Preference number: 4 (lower is better)
Translates to: VGHNMAVSESQNLTVGCSCRWQV*WSPGLN
Trigger: GTTTAAGCCTGGACTCCATCACACCTGCCACCTGCA...GCTGCACCCTACTGTGAGGTTCTGTGACTCACTCACTGCCATGTTGTGCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp GAGCTTCTACAGGGGAGCCTTCCAACCTGCCCCAATGAGCCGTGGTCATTGCATCCAGAGCCACCCTGTTaGGAATCTGCTCCAGGTACA +
Preference number: 4 (lower is better)
Translates to: ELLQGSLPTCPNEPWSLHPEPPC*ESAPGT
Trigger: TGTACCTGGAGCAGATTCGCAACAGGGTGGCTCTGG...ATGCAATGACCACGGCTCATTGGGGCAGGTTGGAAGGCTCCCCTGTAGAAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp GAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTCCTTGGGGTCAACGTGTATaGCACGGAGCAGCACGTCCA +
Preference number: 4 (lower is better)
Translates to: EVTVGSDMVNSQGLRGSPWGQRV*HGAARP
Trigger: TGGACGTGCTGCTCCGTGGCATACACGTTGACCCCA...AGGACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTTGGTCAGCCGCTCCCTaGTCACCATGTGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: RGPQRVMYRLRFHLSSLSWSAAP*SPCGTW
Trigger: CCAGGTGCCACATGGTGAGCAGGGAGCGGCTGACCA...AGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTGGCAGCTCTGATCCATaGCTCGGCCACAGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: RGPQRVMYRLRFHLSSLSGSSDP*LGHSPL
Trigger: TAGGGGGCTGTGGCCGAGGCATGGATCAGAGCTGCC...AGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp TGCTGGCAGGGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTGCCCACTGCTTCACCTaGTCCTCTCTCACACTCCAG +
Preference number: 4 (lower is better)
Translates to: CWQGGAEGKTLVEISQVGAHCFT*SSLTLQ
Trigger: CTGGAGTGTGAGAGAGGAGCAGGTGAAGCAGTGGGC...ACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCCCTGCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GGAGCCCCCAAACTGGAGGCAATTGTCTTTGAGGTAACCACTCACCCCAGCTTTGAGCCGGATGTGACCTaGCTGGTCCAGGAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: GAPKLEAIVFEVTTHPSFEPDVT*LVQEQV
Trigger: AACCTGCTCCTGGACCAGGCAGGTCACATCCGGCTC...AAAGCTGGGGTGAGTGGTTACCTCAAAGACAATTGCCTCCAGTTTGGGGGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCACGCCCACAGCTCAGCGCCAGTaGCACAGAAGGCAACCTTTA +
Preference number: 4 (lower is better)
Translates to: GGAEGKTLVEISQVGPTPTAQRQ*HRRQPL
Trigger: TAAAGGTTGCCTTCTGTGGCACTGGCGCTGAGCTGT...GGGCGTGGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCACGCCCAACCTCACAGTAGGGTaGAGCAGGTGGTCAACAGCT +
Preference number: 4 (lower is better)
Translates to: GGAEGKTLVEISQVGPTPNLTVG*SRWSTA
Trigger: AGCTGTTGACCACCTGCTGCACCCTACTGTGAGGTT...GGGCGTGGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR GCA 90 bp TGCTGGCAGGGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTAACAGATGGCATCCCTaGTTCTGGGCCTCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: CWQGGAEGKTLVEISQVGNRWHP*FWASPA
Trigger: AGCTGGGGAGGCCCAGAAGCAGGGATGCCATCTGTT...ACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCCCTGCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR GCA 90 bp TCTGACAGTTGGGCCTTCAGAGCCAGGCACGTGGACCGTGTCAGAAGCGCCACCTTCTGGTTTCAGACTTaGTCTAAGGGGCAGACCCAT +
Preference number: 4 (lower is better)
Translates to: SDSWAFRARHVDRVRSATFWFQT*SKGQTH
Trigger: ATGGGTCTGCCCCTTAGAGCAAGTCTGAAACCAGAA...GGTGGCGCTTCTGACACGGTCCACGTGCCTGGCTCTGAAGGCCCAACTGTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGACACCTTGTCTAAACTaGTTTGGCCTGGAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: QTVPSIPRPKPADRGPALTPCLN*FGLEAE
Trigger: TTCAGCTTCCAGGCCAAAGCAGTTTAGACAAGGTGT...CAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTCCTGATTACGCATTCAGCACATaGAGGCCACACACGCTGGGC +
Preference number: 4 (lower is better)
Translates to: VTVGSDMVNSQGLRGSPDYAFST*RPHTLG
Trigger: GCCCAGCGTGTGTGGCCTCCATGTGCTGAATGCGTA...ATCAGGACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp AGCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGCCCAGTACTGTGTTGAGCTCTaGAGAGAGCTGAGGATATCT +
Preference number: 4 (lower is better)
Translates to: SWPFLGGGHNSEAPVGAQYCVEL*RELRIS
Trigger: AGATATCCTCAGCTCTCTCCAGAGCTCAACACAGTA...CTGGGCTCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp AGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTCCCTGCTCACCATGTaGCACCTGGGTAGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: RGRTWTTESHVQAALSLVSLLTM*HLGRLF
Trigger: GAAGAGCCTACCCAGGTGCCACATGGTGAGCAGGGA...GACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CTGGAGGCAATTGTCTTTGAGGTAACCACTCACCCCAGCTTTTCAGAGACCAGACCTTCAGCCTCCCTCTaGGGTCTGGTGGATGGGGCC +
Preference number: 4 (lower is better)
Translates to: LEAIVFEVTTHPSFSETRPSASL*GLVDGA
Trigger: GGCCCCATCCACCAGACCCCAGAGGGAGGCTGAAGG...TCTGGTCTCTGAAAAGCTGGGGTGAGTGGTTACCTCAAAGACAATTGCCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GGAGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGAATCCCACCCACCTCTaGGGCGCTGTAGAGATTGTC +
Preference number: 4 (lower is better)
Translates to: GEAGRGPQRVMYRLRFHLNPTHL*GAVEIV
Trigger: GACAATCTCTACAGCGCCCCAGAGGTGGGTGGGATT...CAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CATGAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTCCTGAAGGGTGGCTCTaGGACAGTGCCATTCCCGTC +
Preference number: 4 (lower is better)
Translates to: HEVTVGSDMVNSQGLRGSPEGWL*DSAIPV
Trigger: GACGGGAATGGCACTGTCCCAGAGCCACCCTTCAGG...ACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CCCACCTTCCTTGAGCCTGTCAAGCCATACTCTAGAATAGAGAATTTGGGGTCAAGCCACTCGGGCAGCTaGAGCTGGGTGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PTFLEPVKPYSRIENLGSSHSGS*SWVWAW
Trigger: CCAGGCCCACACCCAGCTCCAGCTGCCCGAGTGGCT...TGACCCCAAATTCTCTATTCTAGAGTATGGCTTGACAGGCTCAAGGAAGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp CCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGTACTGAAAAAGGGATaGGACTTGAGTTTGCTGACA +
Preference number: 4 (lower is better)
Translates to: PRPKPADRGPALGWVSGKVLKKG*DLSLLT
Trigger: TGTCAGCAAACTCAAGTCCCATCCCTTTTTCAGTAC...CTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553789.5
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGAGGGTACTGAAAAAGGGATaGGACTTGAGTTTGCTGACA +
Preference number: 4 (lower is better)
Translates to: AQSPLIEGQPWVGCQARRVLKKG*DLSLLT
Trigger: TGTCAGCAAACTCAAGTCCCATCCCTTTTTCAGTAC...CCTCCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553789.5
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CCCAGTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGTACTGAAAAAGGGATaGGACTTGAGTTTGCTGACA +
Preference number: 4 (lower is better)
Translates to: PSGSPAGQTVPSIPRPKPVLKKG*DLSLLT
Trigger: TGTCAGCAAACTCAAGTCCCATCCCTTTTTCAGTAC...GGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCACTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGAGGAGACCAGCTTGCTCCATTaGATGGTACTGAAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: PKPADRGPALGWVSGKEETSLLH*MVLKKG
Trigger: TCCCTTTTTCAGTACCATCCAATGGAGCAAGCTGGT...CTCCTCCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553789.5
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp AGCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGCCCAGACCAGCTTGCTCCATTaGATGGTACTGAAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: SWPFLGGGHNSEAPVGAQTSLLH*MVLKKG
Trigger: TCCCTTTTTCAGTACCATCCAATGGAGCAAGCTGGT...CTGGGCTCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp TGGCAGGGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCCTAGCCAGGACAGTCTaGTTTGGGTCCACTGAGCCA +
Preference number: 4 (lower is better)
Translates to: WQGGAEGKTLVEISQVGPLARTV*FGSTEP
Trigger: TGGCTCAGTGGACCCAAACCAGACTGTCCTGGCTAG...GGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCCCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CTCCCAAGTCTGAAATCACAAGATAGGGGGCATGGTCAGGAATCGGGGGTGGGGTGCACGAACAGCTTCTaGTGGAAGAGGCCTACTCGC +
Preference number: 4 (lower is better)
Translates to: LPSLKSQDRGHGQESGVGCTNSF*WKRPTR
Trigger: GCGAGTAGGCCTCTTCCACCAGAAGCTGTTCGTGCA...CCCCACCCCCGATTCCTGACCATGCCCCCTATCTTGTGATTTCAGACTTGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp AGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCCCCACACAGGCCCACTaGGGAGGAGGACTCTTGATT +
Preference number: 4 (lower is better)
Translates to: RGRTWTTESHVQAALSLVPTQAH*GGGLLI
Trigger: AATCAAGAGTCCTCCTCCCCAGTGGGCCTGTGTGGG...GACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp AGGTCGGTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTGTTCCATGCGTTTTGTaGTTTCTTATCCCAAAAGGG +
Preference number: 4 (lower is better)
Translates to: RSVPRPGDRVNPERSPQTVPCVL*FLIPKG
Trigger: CCCTTTTGGGATAAGAAACCACAAAACGCATGGAAC...AGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGACCGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCACGCCCGAGGAGCCCCCAAACTaGAGGCAATTGTCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: GGAEGKTLVEISQVGPTPEEPPN*RQLSLR
Trigger: CCTCAAAGACAATTGCCTCCAGTTTGGGGGCTCCTC...GGGCGTGGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CATGAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTTCAGAGCCAGGCACGTaGACCGTGTCAGAAGCGCCA +
Preference number: 4 (lower is better)
Translates to: HEVTVGSDMVNSQGLRGSSEPGT*TVSEAP
Trigger: TGGCGCTTCTGACACGGTCCACGTGCCTGGCTCTGA...ACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCACGCCCCTCTTGACTTCACTCTaGAGCTTCTACAGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: GGAEGKTLVEISQVGPTPLLTSL*SFYRGA
Trigger: GGCTCCCCTGTAGAAGCTCCAGAGTGAAGTCAAGAG...GGGCGTGGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp CCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGATGTGTAGCTTTGGGTaGATGAAGCACAGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: PFLAQSPLIEGQPWVGCQMCSFG*MKHRSS
Trigger: GGAACTTCTGTGCTTCATCCACCCAAAGCTACACAT...CTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR TCA 90 bp GGAGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGCATCTGGTACTGTGTTaGGCTCTGGAGAGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: GEAGRGPQRVMYRLRFHLHLVLC*ALERAE
Trigger: CTCAGCTCTCTCCAGAGCTCAACACAGTACCAGATG...CAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTTGCTCCAGGTACACGTaGGCTTGGGACCGTGCTCGT +
Preference number: 4 (lower is better)
Translates to: DVDHRESCTGCAFTCLLCCSRYT*AWDRAR
Trigger: ACGAGCACGGTCCCAAGCTCACGTGTACCTGGAGCA...ACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CCTGAGAGGGAGTCCTCATCCCTCCCTGCACAACAGATGGCATCCCTGCTTCTGCATTCTGATAGTGGTTaGAGGCCGCCTCATAGTCCT +
Preference number: 4 (lower is better)
Translates to: PERESSSLPAQQMASLLLHSDSG*RPPHSP
Trigger: AGGACTATGAGGCGGCCTTCAACCACTATCAGAATG...CAGAAGCAGGGATGCCATCTGTTGTGCAGGGAGGGATGAGGACTCCCTCTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555009.5
CDS-3UTR TCA 90 bp GGAGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGCGCTCACAAAGTACCTaGGCAGCTTCGTCATGTAGG +
Preference number: 4 (lower is better)
Translates to: GEAGRGPQRVMYRLRFHLRSQST*AASSCR
Trigger: CCTACATGACGAAGCTGCTCAGGTACTTTGTGAGCG...CAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CTGGAGGCAATTGTCTTTGAGGTAACCACTCACCCCAGCTTTTCAGAGACCAGAGCTGACAGGCAGCTCTaGTCCATGCCTCGGCCACAG +
Preference number: 4 (lower is better)
Translates to: LEAIVFEVTTHPSFSETRADRQL*SMPRPQ
Trigger: CTGTGGCCGAGGCATGGATCAGAGCTGCCTGTCAGC...TCTGGTCTCTGAAAAGCTGGGGTGAGTGGTTACCTCAAAGACAATTGCCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GTGGGGCACAACATGGCAGTGAGTGAGTCACAGAACCTCACAGTAGGGTGCAGCGGCACAACATGGCAGTaGGTGAGTCACAGAACCTCA +
Preference number: 4 (lower is better)
Translates to: VGHNMAVSESQNLTVGCSGTTWQ*VSHRTS
Trigger: TGAGGTTCTGTGACTCACTCACTGCCATGTTGTGCC...GCTGCACCCTACTGTGAGGTTCTGTGACTCACTCACTGCCATGTTGTGCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCACGCCCTTGCTCTCCCAAGTCTaGAATCACAAGATAGGGGGC +
Preference number: 4 (lower is better)
Translates to: GGAEGKTLVEISQVGPTPLLSQV*NHKIGG
Trigger: GCCCCCTATCTTGTGATTTCAGACTTGGGAGAGCAA...GGGCGTGGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR TCA 90 bp TGGCAGGGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCGGAGGCAATTGTCTTTaGGGTAACCACTCACCCCAG +
Preference number: 4 (lower is better)
Translates to: WQGGAEGKTLVEISQVGPGGNCL*GNHSPQ
Trigger: CTGGGGTGAGTGGTTACCTCAAAGACAATTGCCTCC...GGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCCCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR TCA 90 bp AACAGCTTCTGGTGGAAGAGGCCTACTCGCTGTGTGACTAAGAGGACTAGCCAGTCTCCCCACCATGAGTaGGGGGTCTGGTCTGACAGT +
Preference number: 4 (lower is better)
Translates to: NSFWWKRPTRCVTKRTSQSPHHE*GVWSDS
Trigger: ACTGTCAGACCAGACCCCTCACTCATGGTGGGGAGA...CTGGCTAGTCCTCTTAGTCACACAGCGAGTAGGCCTCTTCCACCAGAAGCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR TCA 90 bp AGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCGGAAGTGGTCCAGCCTaGCTTAGGGAGAGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: RGRTWTTESHVQAALSLVGSGPA*LRESSR
Trigger: TCTGCTACTCTCCCTAAGTCAGGCTGGACCACTTCC...GACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp AGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCCCAGAGCCACCCTGTTaGGAATCTGCTCCAGGTACA +
Preference number: 4 (lower is better)
Translates to: RGRTWTTESHVQAALSLVPEPPC*ESAPGT
Trigger: TGTACCTGGAGCAGATTCGCAACAGGGTGGCTCTGG...GACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GGAGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGGTTGAAGATCTCCTCTaGCCGCCGCAGGTATTTGGT +
Preference number: 4 (lower is better)
Translates to: GEAGRGPQRVMYRLRFHLVEDLL*PPQVFG
Trigger: ACCAAATACCTGCGGCGGGCAGAGGAGATCTTCAAC...CAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTCTGCTCAGCGGCCGCTaGAGGTGGCAGTTGAAGATC +
Preference number: 4 (lower is better)
Translates to: RGPQRVMYRLRFHLSSLSLLSGR*RWQLKI
Trigger: GATCTTCAACTGCCACCTGCAGCGGCCGCTGAGCAG...AGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CTCTTAGGAGATCCTGAGAACATGTGTCCAGGGTCGTCTGGCTACAACTTAGTTCGGCAGAGCTCAGCGTaGGAATGGGCCGGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: LLGDPENMCPGSSGYNLVRQSSA*EWAGAS
Trigger: TGAGGCTCCGGCCCATTCGCACGCTGAGCTCTGCCG...AACTAAGTTGTAGCCAGACGACCCTGGACACATGTTCTCAGGATCTCCTAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp TGCTGGCAGGGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTTGCACATGCTCCAGGTaGAGGAAGATGGAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: CWQGGAEGKTLVEISQVGCTCSR*RKMESS
Trigger: CGAGGACTCCATCTTCCTGCACCTGGAGCATGTGCA...ACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCCCTGCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTCCTGATTGCACATGCTCCAGGTaGAGGAAGATGGAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: VTVGSDMVNSQGLRGSPDCTCSR*RKMESS
Trigger: CGAGGACTCCATCTTCCTGCACCTGGAGCATGTGCA...ATCAGGACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTCCTGTGCCTCCTTGCACATaGTCCAGGTGCAGGAAGATG +
Preference number: 4 (lower is better)
Translates to: EVTVGSDMVNSQGLRGSPVPPCT*SRCRKM
Trigger: CATCTTCCTGCACCTGGAGCATGTGCAAGGAGGCAC...AGGACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CATGAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTGGTGGGACCAGAGAGTaGCTCCTTGCACATGCTCCA +
Preference number: 4 (lower is better)
Translates to: HEVTVGSDMVNSQGLRGSGGTRE*LLAHAP
Trigger: TGGAGCATGTGCAAGGAGGCACTCTCTGGTCCCACC...ACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CCAAAAGGGCATGAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGGCCCACTGCTTCACCTaGTCCTCTCTCACACTCCAG +
Preference number: 4 (lower is better)
Translates to: PKGHEVTVGSDMVNSQGLAHCFT*SSLTLQ
Trigger: CTGGAGTGTGAGAGAGGAGCAGGTGAAGCAGTGGGC...CAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTCATGCCCTTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GTGGGGCACAACATGGCAGTGAGTGAGTCACAGAACCTCACAGTAGGGTGCAGCAACCTCACAGTAGGGTaGAGCAGGTGGTCAACAGCT +
Preference number: 4 (lower is better)
Translates to: VGHNMAVSESQNLTVGCSNLTVG*SRWSTA
Trigger: AGCTGTTGACCACCTGCTGCACCCTACTGTGAGGTT...GCTGCACCCTACTGTGAGGTTCTGTGACTCACTCACTGCCATGTTGTGCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CCACTCACCCCAGCTTTTCAGAGACCAGAGGCAAGACATTTCTGGCTAAGAGCCAACAGATGGCATCCCTaGTTCTGGGCCTCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: PLTPAFQRPEARHFWLRANRWHP*FWASPA
Trigger: AGCTGGGGAGGCCCAGAAGCAGGGATGCCATCTGTT...GGCTCTTAGCCAGAAATGTCTTGCCTCTGGTCTCTGAAAAGCTGGGGTGAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GAGCTTCTACAGGGGAGCCTTCCAACCTGCCCCAATGAGCCGTGGTCATTGCATTACCTCATCCCTCCCTaGACAACAGATGGCATCCCT +
Preference number: 4 (lower is better)
Translates to: ELLQGSLPTCPNEPWSLHYLIPP*TTDGIP
Trigger: AGGGATGCCATCTGTTGTGCAGGGAGGGATGAGGTA...ATGCAATGACCACGGCTCATTGGGGCAGGTTGGAAGGCTCCCCTGTAGAAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp GAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTCCTGTCCTCATCCCTCCCTaGACAACAGATGGCATCCCT +
Preference number: 4 (lower is better)
Translates to: EVTVGSDMVNSQGLRGSPVLIPP*TTDGIP
Trigger: AGGGATGCCATCTGTTGTGCAGGGAGGGATGAGGAC...AGGACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555009.5
CDS-3UTR CCA 90 bp GACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTGTCCTGAGGTCAGTGTaGTCAGCGAGTGAGGACCCC +
Preference number: 4 (lower is better)
Translates to: DVDHRESCTGCAFTCLLCVLRSV*SASEDP
Trigger: GGGGTCCTCACTCGCTGACCACACTGACCTCAGGAC...ACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp AGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGATCTCATTTACCCTTTaGGGTTTAGCACTTCTCCGT +
Preference number: 4 (lower is better)
Translates to: RQCPPFLAQSPLIEGQPWISFTL*GLALLR
Trigger: ACGGAGAAGTGCTAAACCCCAAAGGGTAAATGAGAT...CCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp AGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTCAGTCTCCTGGCCACCGCGCAGGCCTaGGGCTCTGTTTTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: RESCTGCAFTCLLCLSLLATAQA*GSVFLS
Trigger: GGAAAGGAAAACAGAGCCCCAGGCCTGCGCGGTGGC...CAGGAGACTGAGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CATGAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTAGCGGCCGCTGCAGGTaGCAGTTGAAGATCTCCTCT +
Preference number: 4 (lower is better)
Translates to: HEVTVGSDMVNSQGLRGSSGRCR*QLKISS
Trigger: AGAGGAGATCTTCAACTGCCACCTGCAGCGGCCGCT...ACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GGAGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCACCATGTGGCACCTaGGTAGGCTCTTCACCACAA +
Preference number: 4 (lower is better)
Translates to: GEAGRGPQRVMYRLRFHLSPCGT*VGSSPQ
Trigger: TTGTGGTGAAGAGCCTACCCAGGTGCCACATGGTGA...CAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CCAAAAGGGCATGAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGTCCCTGCTCACCATGTaGCACCTGGGTAGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: PKGHEVTVGSDMVNSQGLSLLTM*HLGRLF
Trigger: GAAGAGCCTACCCAGGTGCCACATGGTGAGCAGGGA...CAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTCATGCCCTTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CCCACCTTCCTTGAGCCTGTCAAGCCATACTCTAGAATAGAGAATTTGGGGTCACCTTCAGCCTCCCTCTaGGGTCTGGTGGATGGGGCC +
Preference number: 4 (lower is better)
Translates to: PTFLEPVKPYSRIENLGSPSASL*GLVDGA
Trigger: GGCCCCATCCACCAGACCCCAGAGGGAGGCTGAAGG...TGACCCCAAATTCTCTATTCTAGAGTATGGCTTGACAGGCTCAAGGAAGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp CATGAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTCAGAGGTGCTGGTCCTaGCTGTGGGTTCACCTTCAG +
Preference number: 4 (lower is better)
Translates to: HEVTVGSDMVNSQGLRGSQRCWS*LWVHLQ
Trigger: CTGAAGGTGAACCCACAGCCAGGACCAGCACCTCTG...ACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp AGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTCAGTCTCCTGGCCACCTGGGGCCTTTaGAAGGTCCGAGGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: RESCTGCAFTCLLCLSLLATWGL*KVRGAR
Trigger: TCTGGCTCCTCGGACCTTCCAAAGGCCCCAGGTGGC...CAGGAGACTGAGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp AGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTCAGTCTCCTGGTGCAGGTGGCCACCTaGGGCCTTTGGAAGGTCCGA +
Preference number: 4 (lower is better)
Translates to: RESCTGCAFTCLLCLSLLVQVAT*GLWKVR
Trigger: TCGGACCTTCCAAAGGCCCCAGGTGGCCACCTGCAC...CAGGAGACTGAGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GGAGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTGGATTCCTGAAGGGTaGCTCTGGGACAGTGCCATT +
Preference number: 4 (lower is better)
Translates to: GEAGRGPQRVMYRLRFHLWIPEG*LWDSAI
Trigger: AATGGCACTGTCCCAGAGCCACCCTTCAGGAATCCA...CAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCGTACTGAAAAAGGGATaGGACTTGAGTTTGCTGACA +
Preference number: 4 (lower is better)
Translates to: DRQCPPFLAQSPLIEGQPVLKKG*DLSLLT
Trigger: TGTCAGCAAACTCAAGTCCCATCCCTTTTTCAGTAC...GGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553789.5
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp AGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCCTAGCCAGGACAGTCTaGTTTGGGTCCACTGAGCCA +
Preference number: 4 (lower is better)
Translates to: RGRTWTTESHVQAALSLVLARTV*FGSTEP
Trigger: TGGCTCAGTGGACCCAAACCAGACTGTCCTGGCTAG...GACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GGAGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGACGAACAGCTTCTGGTaGAAGAGGCCTACTCGCTGT +
Preference number: 4 (lower is better)
Translates to: GEAGRGPQRVMYRLRFHLTNSFW*KRPTRC
Trigger: ACAGCGAGTAGGCCTCTTCCACCAGAAGCTGTTCGT...CAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp TGGCAGGGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCACGAACAGCTTCTGGTaGAAGAGGCCTACTCGCTGT +
Preference number: 4 (lower is better)
Translates to: WQGGAEGKTLVEISQVGPTNSFW*KRPTRC
Trigger: ACAGCGAGTAGGCCTCTTCCACCAGAAGCTGTTCGT...GGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCCCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp TGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGCCCAGCAGGTTCCATGCGTTTTGTaGTTTCTTATCCCAAAAGGG +
Preference number: 4 (lower is better)
Translates to: WPFLGGGHNSEAPVGAQQVPCVL*FLIPKG
Trigger: CCCTTTTGGGATAAGAAACCACAAAACGCATGGAAC...CTGCTGGGCTCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CTCCCCACCATGAGTGAGGGGTCTGGTCTGACAGTTGGGCCTTCAGAGCCAGGCGAGGCAAGACATTTCTaGCTAAGAGCCATGGATAGT +
Preference number: 4 (lower is better)
Translates to: LPTMSEGSGLTVGPSEPGEARHF*LRAMDS
Trigger: ACTATCCATGGCTCTTAGCCAGAAATGTCTTGCCTC...GCCTGGCTCTGAAGGCCCAACTGTCAGACCAGACCCCTCACTCATGGTGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp TCCAGGAGCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGAGGCAAGACATTTCTaGCTAAGAGCCATGGATAGT +
Preference number: 4 (lower is better)
Translates to: SRSWPFLGGGHNSEAPVGEARHF*LRAMDS
Trigger: ACTATCCATGGCTCTTAGCCAGAAATGTCTTGCCTC...TCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGCTCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTTCAGAGCCAGGCACGTaGACCGTGTCAGAAGCGCCA +
Preference number: 4 (lower is better)
Translates to: RGPQRVMYRLRFHLSSLSSEPGT*TVSEAP
Trigger: TGGCGCTTCTGACACGGTCCACGTGCCTGGCTCTGA...AGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CATGAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTGTCTGGTCTGACAGTTaGGCCTTCAGAGCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: HEVTVGSDMVNSQGLRGSVWSDS*AFRARH
Trigger: GTGCCTGGCTCTGAAGGCCCAACTGTCAGACCAGAC...ACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp TGCCCCAATGAGCCGTGGTCATTGCATGGAAGAAGCGAGAACACCGTAGGCCAGTGCCCCAATGAGCCGTaGTCATTGCATGGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: CPNEPWSLHGRSENTVGQCPNEP*SLHGRS
Trigger: GCTTCTTCCATGCAATGACCACGGCTCATTGGGGCA...CTGGCCTACGGTGTTCTCGCTTCTTCCATGCAATGACCACGGCTCATTGGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp AGGAGCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGCCACTAACTTGCAACTCTaGCTAGGTTGTGTCCTTAAC +
Preference number: 4 (lower is better)
Translates to: RSWPFLGGGHNSEAPVGATNLQL*LGCVLN
Trigger: GTTAAGGACACAACCTAGCCAGAGTTGCAAGTTAGT...GGCTCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp GTGGGGCACAACATGGCAGTGAGTGAGTCACAGAACCTCACAGTAGGGTGCAGCGGACAGCTCAAGACCTaGGGATGTTGTCATAGGCAG +
Preference number: 4 (lower is better)
Translates to: VGHNMAVSESQNLTVGCSGQLKT*GCCHRQ
Trigger: CTGCCTATGACAACATCCCCAGGTCTTGAGCTGTCC...GCTGCACCCTACTGTGAGGTTCTGTGACTCACTCACTGCCATGTTGTGCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp GGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCACGCCCAGATGTACAGTGGTTTaGTCTGGAGAGGCAGGACAG +
Preference number: 4 (lower is better)
Translates to: GGAEGKTLVEISQVGPTPRCTVV*SGEAGQ
Trigger: CTGTCCTGCCTCTCCAGACCAAACCACTGTACATCT...GGGCGTGGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR TCA 90 bp AGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTCAGTCTCCTGTGCTCCAGGTACACGTaGGCTTGGGACCGTGCTCGT +
Preference number: 4 (lower is better)
Translates to: RESCTGCAFTCLLCLSLLCSRYT*AWDRAR
Trigger: ACGAGCACGGTCCCAAGCTCACGTGTACCTGGAGCA...CAGGAGACTGAGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CTCTTAGGAGATCCTGAGAACATGTGTCCAGGGTCGTCTGGCTACAACTTAGTTGCTGCAGGTGGCAGTTaGAGATCTCCTCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: LLGDPENMCPGSSGYNLVAAGGS*RSPLPA
Trigger: GGCGGGCAGAGGAGATCTTCAACTGCCACCTGCAGC...AACTAAGTTGTAGCCAGACGACCCTGGACACATGTTCTCAGGATCTCCTAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR TCA 90 bp CCCACCTTCCTTGAGCCTGTCAAGCCATACTCTAGAATAGAGAATTTGGGGTCACCAGCCCTCCTAGCTTaGAGGTGCAGGTGGCCACCT +
Preference number: 4 (lower is better)
Translates to: PTFLEPVKPYSRIENLGSPALLA*RCRWPP
Trigger: AGGTGGCCACCTGCACCTTCAAGCTAGGAGGGCTGG...TGACCCCAAATTCTCTATTCTAGAGTATGGCTTGACAGGCTCAAGGAAGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR TCA 90 bp CTCTTAGGAGATCCTGAGAACATGTGTCCAGGGTCGTCTGGCTACAACTTAGTTGTGGGCCTGGATTCCTaGAGGGTGGCTCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: LLGDPENMCPGSSGYNLVVGLDS*RVALGQ
Trigger: CTGTCCCAGAGCCACCCTTCAGGAATCCAGGCCCAC...AACTAAGTTGTAGCCAGACGACCCTGGACACATGTTCTCAGGATCTCCTAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR TCA 90 bp GGAGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGAACGGGTCTGTTGACTaGTGGGTAGATGGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: GEAGRGPQRVMYRLRFHLNGSVD*WVDGSS
Trigger: GCTTGAACCATCTACCCATCAGTCAACAGACCCGTT...CAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp AGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCGCTCAACGGGTCTGTTaGCTGATGGGTAGATGGTTC +
Preference number: 4 (lower is better)
Translates to: RGRTWTTESHVQAALSLVAQRVC*LMGRWF
Trigger: GAACCATCTACCCATCAGTCAACAGACCCGTTGAGC...GACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp TGCTGGCAGGGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTGGCACAACATGGCAGTaGGTGAGTCACAGAACCTCA +
Preference number: 4 (lower is better)
Translates to: CWQGGAEGKTLVEISQVGGTTWQ*VSHRTS
Trigger: TGAGGTTCTGTGACTCACTCACTGCCATGTTGTGCC...ACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCCCTGCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GGAGCCCCCAAACTGGAGGCAATTGTCTTTGAGGTAACCACTCACCCCAGCTTTGGGACTTGTGCTTCATaGAGCGGTGGTTGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: GAPKLEAIVFEVTTHPSFGTCAS*SGGWKW
Trigger: CCACTTCCAACCACCGCTTCATGAAGCACAAGTCCC...AAAGCTGGGGTGAGTGGTTACCTCAAAGACAATTGCCTCCAGTTTGGGGGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR TCA 90 bp TGCTGGCAGGGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTAAGGTTTTATGCAGATaGAGCCTCCAGCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: CWQGGAEGKTLVEISQVGKVLCR*SLQPAG
Trigger: GCCTGCTGGCTGGAGGCTTCATCTGCATAAAACCTT...ACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCCCTGCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp GTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTCCTGATCACGCTGGGCTCAAATaGTGTTCCTCATGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: VTVGSDMVNSQGLRGSPDHAGLK*CSSCCS
Trigger: GGAACAGCATGAGGAACAGCATTTGAGCCCAGCGTG...ATCAGGACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp GAGTGGGGGCATCTCATTTCATTTGGATTTGATAGCCTTGTGGACCAAGATGCTCTGCAGCCCCTCAGCTaGTCCACGGCAGAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: EWGHLISFGFDSLVDQDALQPLS*STAELS
Trigger: GCTGAGCTCTGCCGTGGAGCAGCTGAGGGGCTGCAG...AGCATCTTGGTCCACAAGGCTATCAAATCCAAATGAAATGAGATGCCCCCACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp CCACTCACCCCAGCTTTTCAGAGACCAGAGGCAAGACATTTCTGGCTAAGAGCCTGCACATGCTCCAGGTaGAGGAAGATGGAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: PLTPAFQRPEARHFWLRACTCSR*RKMESS
Trigger: CGAGGACTCCATCTTCCTGCACCTGGAGCATGTGCA...GGCTCTTAGCCAGAAATGTCTTGCCTCTGGTCTCTGAAAAGCTGGGGTGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CCACTCACCCCAGCTTTTCAGAGACCAGAGGCAAGACATTTCTGGCTAAGAGCCGTGCCTCCTTGCACATaGTCCAGGTGCAGGAAGATG +
Preference number: 4 (lower is better)
Translates to: PLTPAFQRPEARHFWLRAVPPCT*SRCRKM
Trigger: CATCTTCCTGCACCTGGAGCATGTGCAAGGAGGCAC...GGCTCTTAGCCAGAAATGTCTTGCCTCTGGTCTCTGAAAAGCTGGGGTGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp AGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTCAGTCTCCTGCGCTACCAGCATCTCTaGCGCCCACTGCTTCACCTG +
Preference number: 4 (lower is better)
Translates to: RESCTGCAFTCLLCLSLLRYQHL*RPLLHL
Trigger: CAGGTGAAGCAGTGGGCGGCAGAGATGCTGGTAGCG...CAGGAGACTGAGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GGAGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGCATGGTGAGTCCACATaGTCAACGGGTCTGTTGACT +
Preference number: 4 (lower is better)
Translates to: GEAGRGPQRVMYRLRFHLHGEST*STGLLT
Trigger: AGTCAACAGACCCGTTGAGCATGTGGACTCACCATG...CAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTAACAGATGGCATCCCTaGTTCTGGGCCTCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: DVDHRESCTGCAFTCLLCNRWHP*FWASPA
Trigger: AGCTGGGGAGGCCCAGAAGCAGGGATGCCATCTGTT...ACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCACGCCCTCTTCCCCTCCCTTTTaGTCTCCCAAGTCTGAAATC +
Preference number: 4 (lower is better)
Translates to: GGAEGKTLVEISQVGPTPSSPPF*SPKSEI
Trigger: GATTTCAGACTTGGGAGAGCAAAAGGGAGGGGAAGA...GGGCGTGGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR GCA 90 bp AGGTCGGTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTTGGATAGTTGTTCCATaGGTTTTGTGGTTTCTTATC +
Preference number: 4 (lower is better)
Translates to: RSVPRPGDRVNPERSPQTWIVVP*VLWFLI
Trigger: GATAAGAAACCACAAAACGCATGGAACAACTATCCA...AGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGACCGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CCAGTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGTGGATAGTTGTTCCATaGGTTTTGTGGTTTCTTATC +
Preference number: 4 (lower is better)
Translates to: PVGAQQDRQCPPFLAQSPWIVVP*VLWFLI
Trigger: GATAAGAAACCACAAAACGCATGGAACAACTATCCA...CGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CTCCCCACCATGAGTGAGGGGTCTGGTCTGACAGTTGGGCCTTCAGAGCCAGGCATCTCATTTACCCTTTaGGGTTTAGCACTTCTCCGT +
Preference number: 4 (lower is better)
Translates to: LPTMSEGSGLTVGPSEPGISFTL*GLALLR
Trigger: ACGGAGAAGTGCTAAACCCCAAAGGGTAAATGAGAT...GCCTGGCTCTGAAGGCCCAACTGTCAGACCAGACCCCTCACTCATGGTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp CCCACCTTCCTTGAGCCTGTCAAGCCATACTCTAGAATAGAGAATTTGGGGTCAGCCACCGCGCAGGCCTaGGGCTCTGTTTTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: PTFLEPVKPYSRIENLGSATAQA*GSVFLS
Trigger: GGAAAGGAAAACAGAGCCCCAGGCCTGCGCGGTGGC...TGACCCCAAATTCTCTATTCTAGAGTATGGCTTGACAGGCTCAAGGAAGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp CATGAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTCACGTCGCTCCTTGTTaGGGTCAACGTGTATGCCAC +
Preference number: 4 (lower is better)
Translates to: HEVTVGSDMVNSQGLRGSHVAPC*GQRVCH
Trigger: GTGGCATACACGTTGACCCCAACAAGGAGCGACGTG...ACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CCAAAAGGGCATGAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGCACGTCGCTCCTTGTTaGGGTCAACGTGTATGCCAC +
Preference number: 4 (lower is better)
Translates to: PKGHEVTVGSDMVNSQGLHVAPC*GQRVCH
Trigger: GTGGCATACACGTTGACCCCAACAAGGAGCGACGTG...CAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTCATGCCCTTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTAGCGGCCGCTGCAGGTaGCAGTTGAAGATCTCCTCT +
Preference number: 4 (lower is better)
Translates to: DVDHRESCTGCAFTCLLCSGRCR*QLKISS
Trigger: AGAGGAGATCTTCAACTGCCACCTGCAGCGGCCGCT...ACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTCAGAGGTGCTGGTCCTaGCTGTGGGTTCACCTTCAG +
Preference number: 4 (lower is better)
Translates to: RGPQRVMYRLRFHLSSLSQRCWS*LWVHLQ
Trigger: CTGAAGGTGAACCCACAGCCAGGACCAGCACCTCTG...AGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GGAGCCCCCAAACTGGAGGCAATTGTCTTTGAGGTAACCACTCACCCCAGCTTTAATCCCACCCACCTCTaGGGCGCTGTAGAGATTGTC +
Preference number: 4 (lower is better)
Translates to: GAPKLEAIVFEVTTHPSFNPTHL*GAVEIV
Trigger: GACAATCTCTACAGCGCCCCAGAGGTGGGTGGGATT...AAAGCTGGGGTGAGTGGTTACCTCAAAGACAATTGCCTCCAGTTTGGGGGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTCAGTAGCTGGAGCTGGGTGTaGGCCTGGATTCCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: DHRESCTGCAFTCLLCLSSWSWV*AWIPEG
Trigger: CCCTTCAGGAATCCAGGCCCACACCCAGCTCCAGCT...ACTGAGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp AGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTCAGTCTCCTGAGCTGGAGCTGGGTGTaGGCCTGGATTCCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: RESCTGCAFTCLLCLSLLSWSWV*AWIPEG
Trigger: CCCTTCAGGAATCCAGGCCCACACCCAGCTCCAGCT...CAGGAGACTGAGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp TTCTGGCTAAGAGCCATGGATAGTTGTTCCATGCGTTTTGTGGTTTCTTATCCCAGCCACTCGGGCAGCTaGAGCTGGGTGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: FWLRAMDSCSMRFVVSYPSHSGS*SWVWAW
Trigger: CCAGGCCCACACCCAGCTCCAGCTGCCCGAGTGGCT...GGGATAAGAAACCACAAAACGCATGGAACAACTATCCATGGCTCTTAGCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGGTACTGAAAAAGGGATaGGACTTGAGTTTGCTGACA +
Preference number: 4 (lower is better)
Translates to: PAGQTVPSIPRPKPADRGVLKKG*DLSLLT
Trigger: TGTCAGCAAACTCAAGTCCCATCCCTTTTTCAGTAC...CCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTCAGTAGCTTTTCCAGGAGCTaGCCCTTCCTGGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: DHRESCTGCAFTCLLCLSSFSRS*PFLGGG
Trigger: GCCACCACCCAGGAAGGGCCAGCTCCTGGAAAAGCT...ACTGAGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CCAAAAGGGCATGAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGCTAGCCAGGACAGTCTaGTTTGGGTCCACTGAGCCA +
Preference number: 4 (lower is better)
Translates to: PKGHEVTVGSDMVNSQGLLARTV*FGSTEP
Trigger: TGGCTCAGTGGACCCAAACCAGACTGTCCTGGCTAG...CAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTCATGCCCTTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTTCCCTGCACAACAGATaGCATCCCTGCTTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: RGPQRVMYRLRFHLSSLSSLHNR*HPCFWA
Trigger: GGCCCAGAAGCAGGGATGCCATCTGTTGTGCAGGGA...AGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTGTCTGGTCTGACAGTTaGGCCTTCAGAGCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: DVDHRESCTGCAFTCLLCVWSDS*AFRARH
Trigger: GTGCCTGGCTCTGAAGGCCCAACTGTCAGACCAGAC...ACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CCACTCACCCCAGCTTTTCAGAGACCAGAGGCAAGACATTTCTGGCTAAGAGCCCAGAGCAGGCTTTATTaGGGCCGTGTAAACCCCAGG +
Preference number: 4 (lower is better)
Translates to: PLTPAFQRPEARHFWLRAQSRLY*GRVNPR
Trigger: CCTGGGGTTTACACGGCCCCAATAAAGCCTGCTCTG...GGCTCTTAGCCAGAAATGTCTTGCCTCTGGTCTCTGAAAAGCTGGGGTGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CTCTTAGGAGATCCTGAGAACATGTGTCCAGGGTCGTCTGGCTACAACTTAGTTCCCCTGAGGCCCACATaGCATGCTGCTCACCACCAG +
Preference number: 4 (lower is better)
Translates to: LLGDPENMCPGSSGYNLVPLRPT*HAAHHQ
Trigger: CTGGTGGTGAGCAGCATGCCATGTGGGCCTCAGGGG...AACTAAGTTGTAGCCAGACGACCCTGGACACATGTTCTCAGGATCTCCTAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp AGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGTCGACTGTAAGAGCTaGGACCCACAGTATTCTAAA +
Preference number: 4 (lower is better)
Translates to: SPAGQTVPSIPRPKPADRVDCKS*DPQYSK
Trigger: TTTAGAATACTGTGGGTCCCAGCTCTTACAGTCGAC...TCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR TCA 90 bp GGAGCCCCCAAACTGGAGGCAATTGTCTTTGAGGTAACCACTCACCCCAGCTTTCATCTGGTACTGTGTTaGGCTCTGGAGAGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: GAPKLEAIVFEVTTHPSFHLVLC*ALERAE
Trigger: CTCAGCTCTCTCCAGAGCTCAACACAGTACCAGATG...AAAGCTGGGGTGAGTGGTTACCTCAAAGACAATTGCCTCCAGTTTGGGGGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000557413.6
CDS-3UTR TCA 90 bp AGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCCATTCTGATAGTGGTTaGAGGCCGCCTCATAGTCCT +
Preference number: 4 (lower is better)
Translates to: RGRTWTTESHVQAALSLVHSDSG*RPPHSP
Trigger: AGGACTATGAGGCGGCCTTCAACCACTATCAGAATG...GACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GGAGCCCCCAAACTGGAGGCAATTGTCTTTGAGGTAACCACTCACCCCAGCTTTCGCTCACAAAGTACCTaGGCAGCTTCGTCATGTAGG +
Preference number: 4 (lower is better)
Translates to: GAPKLEAIVFEVTTHPSFRSQST*AASSCR
Trigger: CCTACATGACGAAGCTGCTCAGGTACTTTGTGAGCG...AAAGCTGGGGTGAGTGGTTACCTCAAAGACAATTGCCTCCAGTTTGGGGGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CATGAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTCGCTCACAAAGTACCTaGGCAGCTTCGTCATGTAGG +
Preference number: 4 (lower is better)
Translates to: HEVTVGSDMVNSQGLRGSRSQST*AASSCR
Trigger: CCTACATGACGAAGCTGCTCAGGTACTTTGTGAGCG...ACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTCCTAGTGGATCAGTGTCCTaGGATGAGTCTCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: EVTVGSDMVNSQGLRGSPSGSVS*DESPEM
Trigger: CATCTCTGGAGACTCATCTCAGGACACTGATCCACT...AGGACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CTGGAGGCAATTGTCTTTGAGGTAACCACTCACCCCAGCTTTTCAGAGACCAGACTGGTTTGGGTCCACTaGGCCAGTGGATCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: LEAIVFEVTTHPSFSETRLVWVH*ASGSVS
Trigger: GGACACTGATCCACTGGCTCAGTGGACCCAAACCAG...TCTGGTCTCTGAAAAGCTGGGGTGAGTGGTTACCTCAAAGACAATTGCCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CATGAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTGGGGAGGAGGACTCTTaGTTCTGGTTTCAGACTTGC +
Preference number: 4 (lower is better)
Translates to: HEVTVGSDMVNSQGLRGSGEEDS*FWFQTC
Trigger: GCAAGTCTGAAACCAGAATCAAGAGTCCTCCTCCCC...ACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTCAGTCTGGCAGGGAGGAGCTaGGGGCAAAACTCTAGTGGA +
Preference number: 4 (lower is better)
Translates to: DHRESCTGCAFTCLLCLSLAGRS*GQNSSG
Trigger: TCCACTAGAGTTTTGCCCTCAGCTCCTCCCTGCCAG...ACTGAGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CATGAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTTCTGTCTCAGTCTCCTaGAGAGCCCGAGGAAGTCAA +
Preference number: 4 (lower is better)
Translates to: HEVTVGSDMVNSQGLRGSSVSVS*RARGSQ
Trigger: TTGACTTCCTCGGGCTCTTCAGGAGACTGAGACAGA...ACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CCACTCACCCCAGCTTTTCAGAGACCAGAGGCAAGACATTTCTGGCTAAGAGCCTCTGTCTCAGTCTCCTaGAGAGCCCGAGGAAGTCAA +
Preference number: 4 (lower is better)
Translates to: PLTPAFQRPEARHFWLRASVSVS*RARGSQ
Trigger: TTGACTTCCTCGGGCTCTTCAGGAGACTGAGACAGA...GGCTCTTAGCCAGAAATGTCTTGCCTCTGGTCTCTGAAAAGCTGGGGTGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GTCCTTAACCTTTTTGAGCTTCAGTTTTCTCAGGAGCTACCGTCTGTTGCAAGGCACCAGGCTCATGGCTaGCCTGCAGCTGGGACCATG +
Preference number: 4 (lower is better)
Translates to: VLNLFELQFSQELPSVARHQAHG*PAAGTM
Trigger: CATGGTCCCAGCTGCAGGGCAGCCATGAGCCTGGTG...CCTTGCAACAGACGGTAGCTCCTGAGAAAACTGAAGCTCAAAAAGGTTAAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp TTCTGGCTAAGAGCCATGGATAGTTGTTCCATGCGTTTTGTGGTTTCTTATCCCAGGGCCAGCCGGATCTaGGTGGCCGCATCCACCAGA +
Preference number: 4 (lower is better)
Translates to: FWLRAMDSCSMRFVVSYPRASRI*VAASTR
Trigger: TCTGGTGGATGCGGCCACGCAGATCCGGCTGGCCCT...GGGATAAGAAACCACAAAACGCATGGAACAACTATCCATGGCTCTTAGCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CTGGAGGCAATTGTCTTTGAGGTAACCACTCACCCCAGCTTTTCAGAGACCAGATGGGGTCAACGTGTATaGCACGGAGCAGCACGTCCA +
Preference number: 4 (lower is better)
Translates to: LEAIVFEVTTHPSFSETRWGQRV*HGAARP
Trigger: TGGACGTGCTGCTCCGTGGCATACACGTTGACCCCA...TCTGGTCTCTGAAAAGCTGGGGTGAGTGGTTACCTCAAAGACAATTGCCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GGAGCCCCCAAACTGGAGGCAATTGTCTTTGAGGTAACCACTCACCCCAGCTTTGTTGAAGATCTCCTCTaGCCGCCGCAGGTATTTGGT +
Preference number: 4 (lower is better)
Translates to: GAPKLEAIVFEVTTHPSFVEDLL*PPQVFG
Trigger: ACCAAATACCTGCGGCGGGCAGAGGAGATCTTCAAC...AAAGCTGGGGTGAGTGGTTACCTCAAAGACAATTGCCTCCAGTTTGGGGGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GAGTGGGGGCATCTCATTTCATTTGGATTTGATAGCCTTGTGGACCAAGATGCTGGCAGCTCTGATCCATaGCTCGGCCACAGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: EWGHLISFGFDSLVDQDAGSSDP*LGHSPL
Trigger: TAGGGGGCTGTGGCCGAGGCATGGATCAGAGCTGCC...AGCATCTTGGTCCACAAGGCTATCAAATCCAAATGAAATGAGATGCCCCCACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp AGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCCATGGTGAGTCCACATaGTCAACGGGTCTGTTGACT +
Preference number: 4 (lower is better)
Translates to: RGRTWTTESHVQAALSLVHGEST*STGLLT
Trigger: AGTCAACAGACCCGTTGAGCATGTGGACTCACCATG...GACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CCACTCACCCCAGCTTTTCAGAGACCAGAGGCAAGACATTTCTGGCTAAGAGCCTACCTCATCCCTCCCTaGACAACAGATGGCATCCCT +
Preference number: 4 (lower is better)
Translates to: PLTPAFQRPEARHFWLRAYLIPP*TTDGIP
Trigger: AGGGATGCCATCTGTTGTGCAGGGAGGGATGAGGTA...GGCTCTTAGCCAGAAATGTCTTGCCTCTGGTCTCTGAAAAGCTGGGGTGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR GCA 90 bp TGGCAGGGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCGAGTCATGTACAGGCTaGGCTTTCACTTGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: WQGGAEGKTLVEISQVGPESCTG*AFTCLL
Trigger: GAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTC...GGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCCCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTCCTTCCAGAAGGGACTTGTaGTTCATGAAGCGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: EVTVGSDMVNSQGLRGSPSRRDL*FMKRWL
Trigger: CAACCACCGCTTCATGAAGCACAAGTCCCTTCTGGA...AGGACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp CGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTCACGTCGCTCCTTGTTaGGGTCAACGTGTATGCCAC +
Preference number: 4 (lower is better)
Translates to: RGPQRVMYRLRFHLSSLSHVAPC*GQRVCH
Trigger: GTGGCATACACGTTGACCCCAACAAGGAGCGACGTG...AGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GGAGCCCCCAAACTGGAGGCAATTGTCTTTGAGGTAACCACTCACCCCAGCTTTTCACCATGTGGCACCTaGGTAGGCTCTTCACCACAA +
Preference number: 4 (lower is better)
Translates to: GAPKLEAIVFEVTTHPSFSPCGT*VGSSPQ
Trigger: TTGTGGTGAAGAGCCTACCCAGGTGCCACATGGTGA...AAAGCTGGGGTGAGTGGTTACCTCAAAGACAATTGCCTCCAGTTTGGGGGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCACGCCCCGGTGACAGGGGTACTGAAAAAGGGATaGGACTTGAGTTTGCTGACA +
Preference number: 4 (lower is better)
Translates to: GQNSSGNFPGRSHAPVTGVLKKG*DLSLLT
Trigger: TGTCAGCAAACTCAAGTCCCATCCCTTTTTCAGTAC...CCCTGTCACCGGGGCGTGGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp AACAGCTTCTGGTGGAAGAGGCCTACTCGCTGTGTGACTAAGAGGACTAGCCAGACGAACAGCTTCTGGTaGAAGAGGCCTACTCGCTGT +
Preference number: 4 (lower is better)
Translates to: NSFWWKRPTRCVTKRTSQTNSFW*KRPTRC
Trigger: ACAGCGAGTAGGCCTCTTCCACCAGAAGCTGTTCGT...CTGGCTAGTCCTCTTAGTCACACAGCGAGTAGGCCTCTTCCACCAGAAGCTGTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTTGCACGAACAGCTTCTaGTGGAAGAGGCCTACTCGC +
Preference number: 4 (lower is better)
Translates to: RGPQRVMYRLRFHLSSLSCTNSF*WKRPTR
Trigger: GCGAGTAGGCCTCTTCCACCAGAAGCTGTTCGTGCA...AGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTCAGTTCCCTGCACAACAGATaGCATCCCTGCTTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: DHRESCTGCAFTCLLCLSSLHNR*HPCFWA
Trigger: GGCCCAGAAGCAGGGATGCCATCTGTTGTGCAGGGA...ACTGAGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp AGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTCAGTCTCCTGGTCTGGTCTGACAGTTaGGCCTTCAGAGCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: RESCTGCAFTCLLCLSLLVWSDS*AFRARH
Trigger: GTGCCTGGCTCTGAAGGCCCAACTGTCAGACCAGAC...CAGGAGACTGAGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CATGAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTGCCGTGGTCATTGCATaGAAGAAGCGAGAACACCGT +
Preference number: 4 (lower is better)
Translates to: HEVTVGSDMVNSQGLRGSAVVIA*KKREHR
Trigger: ACGGTGTTCTCGCTTCTTCCATGCAATGACCACGGC...ACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp GTCCTTAACCTTTTTGAGCTTCAGTTTTCTCAGGAGCTACCGTCTGTTGCAAGGCCCCTGAGGCCCACATaGCATGCTGCTCACCACCAG +
Preference number: 4 (lower is better)
Translates to: VLNLFELQFSQELPSVARPLRPT*HAAHHQ
Trigger: CTGGTGGTGAGCAGCATGCCATGTGGGCCTCAGGGG...CCTTGCAACAGACGGTAGCTCCTGAGAAAACTGAAGCTCAAAAAGGTTAAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp CCACTCACCCCAGCTTTTCAGAGACCAGAGGCAAGACATTTCTGGCTAAGAGCCGTCACAGGAGGGAAGTaGGTCCCAGAGAGTAGAACT +
Preference number: 4 (lower is better)
Translates to: PLTPAFQRPEARHFWLRAVTGGK*VPESRT
Trigger: AGTTCTACTCTCTGGGACCCACTTCCCTCCTGTGAC...GGCTCTTAGCCAGAAATGTCTTGCCTCTGGTCTCTGAAAAGCTGGGGTGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp AGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTACAGTGGTTTGGTCTaGAGAGGCAGGACAGCTCAA +
Preference number: 4 (lower is better)
Translates to: RGRTWTTESHVQAALSLVYSGLV*RGRTAQ
Trigger: TTGAGCTGTCCTGCCTCTCCAGACCAAACCACTGTA...GACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR TCA 90 bp AGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTCAGTCTCCTGTTGTTCCCTTGGTCCTaGGGTCAGTGTGGTCAGCGA +
Preference number: 4 (lower is better)
Translates to: RESCTGCAFTCLLCLSLLLFPWS*GQCGQR
Trigger: TCGCTGACCACACTGACCTCAGGACCAAGGGAACAA...CAGGAGACTGAGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CATGAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTCAACCTTTAACATGGTaGGTCCACATGCTCAACGGG +
Preference number: 4 (lower is better)
Translates to: HEVTVGSDMVNSQGLRGSQPLTW*VHMLNG
Trigger: CCCGTTGAGCATGTGGACTCACCATGTTAAAGGTTG...ACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR TCA 90 bp AACAGCTTCTGGTGGAAGAGGCCTACTCGCTGTGTGACTAAGAGGACTAGCCAGTTGCTCTCCCAAGTCTaGAATCACAAGATAGGGGGC +
Preference number: 4 (lower is better)
Translates to: NSFWWKRPTRCVTKRTSQLLSQV*NHKIGG
Trigger: GCCCCCTATCTTGTGATTTCAGACTTGGGAGAGCAA...CTGGCTAGTCCTCTTAGTCACACAGCGAGTAGGCCTCTTCCACCAGAAGCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR TCA 90 bp GACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTGGAGGCAATTGTCTTTaGGGTAACCACTCACCCCAG +
Preference number: 4 (lower is better)
Translates to: DVDHRESCTGCAFTCLLCGGNCL*GNHSPQ
Trigger: CTGGGGTGAGTGGTTACCTCAAAGACAATTGCCTCC...ACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CCATGCGTTTTGTGGTTTCTTATCCCAAAAGGGCATGAAGTCACAGTAGGCAGTGTGAGGGGTCTGGTCTaGCAGTTGGGCCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: PCVLWFLIPKGHEVTVGSVRGLV*QLGLQS
Trigger: GCTCTGAAGGCCCAACTGTCAGACCAGACCCCTCAC...ACTGCCTACTGTGACTTCATGCCCTTTTGGGATAAGAAACCACAAAACGCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR TCA 90 bp TTCTGGCTAAGAGCCATGGATAGTTGTTCCATGCGTTTTGTGGTTTCTTATCCCAGTGTGGTCAGCGAGTaGGGACCCCTCCTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: FWLRAMDSCSMRFVVSYPSVVSE*GPLLEP
Trigger: TGGCTCCAGGAGGGGTCCTCACTCGCTGACCACACT...GGGATAAGAAACCACAAAACGCATGGAACAACTATCCATGGCTCTTAGCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GTCCTTAACCTTTTTGAGCTTCAGTTTTCTCAGGAGCTACCGTCTGTTGCAAGGGAGCCGGATGTGACCTaGCTGGTCCAGGAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: VLNLFELQFSQELPSVAREPDVT*LVQEQV
Trigger: AACCTGCTCCTGGACCAGGCAGGTCACATCCGGCTC...CCTTGCAACAGACGGTAGCTCCTGAGAAAACTGAAGCTCAAAAAGGTTAAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp TGCTGGCAGGGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTTCTTCCCCTCCCTTTTaGTCTCCCAAGTCTGAAATC +
Preference number: 4 (lower is better)
Translates to: CWQGGAEGKTLVEISQVGSSPPF*SPKSEI
Trigger: GATTTCAGACTTGGGAGAGCAAAAGGGAGGGGAAGA...ACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCCCTGCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR GCA 90 bp TGCTGGCAGGGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTTTCTGGTTTCAGACTTaGTCTAAGGGGCAGACCCAT +
Preference number: 4 (lower is better)
Translates to: CWQGGAEGKTLVEISQVGFWFQT*SKGQTH
Trigger: ATGGGTCTGCCCCTTAGAGCAAGTCTGAAACCAGAA...ACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCCCTGCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GAGTGGGGGCATCTCATTTCATTTGGATTTGATAGCCTTGTGGACCAAGATGCTGGGAGCCTTCCAACCTaGCCCAATGAGCCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: EWGHLISFGFDSLVDQDAGSLPT*PNEPWS
Trigger: TGACCACGGCTCATTGGGGCAGGTTGGAAGGCTCCC...AGCATCTTGGTCCACAAGGCTATCAAATCCAAATGAAATGAGATGCCCCCACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp GGAGCCCCCAAACTGGAGGCAATTGTCTTTGAGGTAACCACTCACCCCAGCTTTTCCAGAAGGGACTTGTaGTTCATGAAGCGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: GAPKLEAIVFEVTTHPSFSRRDL*FMKRWL
Trigger: CAACCACCGCTTCATGAAGCACAAGTCCCTTCTGGA...AAAGCTGGGGTGAGTGGTTACCTCAAAGACAATTGCCTCCAGTTTGGGGGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp TGCTGGCAGGGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTTCCCTGCTCCTCCTGTaGGAATCTCATTTACCCTTT +
Preference number: 4 (lower is better)
Translates to: CWQGGAEGKTLVEISQVGSLLLL*ESHLPF
Trigger: AAAGGGTAAATGAGATTCCCACAGGAGGAGCAGGGA...ACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCCCTGCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp TGCCCCAATGAGCCGTGGTCATTGCATGGAAGAAGCGAGAACACCGTAGGCCAGTACTGTGTTGAGCTCTaGAGAGAGCTGAGGATATCT +
Preference number: 4 (lower is better)
Translates to: CPNEPWSLHGRSENTVGQYCVEL*RELRIS
Trigger: AGATATCCTCAGCTCTCTCCAGAGCTCAACACAGTA...CTGGCCTACGGTGTTCTCGCTTCTTCCATGCAATGACCACGGCTCATTGGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp CGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTTGGATTCCTGAAGGGTaGCTCTGGGACAGTGCCATT +
Preference number: 4 (lower is better)
Translates to: RGPQRVMYRLRFHLSSLSWIPEG*LWDSAI
Trigger: AATGGCACTGTCCCAGAGCCACCCTTCAGGAATCCA...AGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CTCCCAAGTCTGAAATCACAAGATAGGGGGCATGGTCAGGAATCGGGGGTGGGGACCAGCTTGCTCCATTaGATGGTACTGAAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: LPSLKSQDRGHGQESGVGTSLLH*MVLKKG
Trigger: TCCCTTTTTCAGTACCATCCAATGGAGCAAGCTGGT...CCCCACCCCCGATTCCTGACCATGCCCCCTATCTTGTGATTTCAGACTTGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp TTGCTCCATTGGATGGTACTGAAAAAGGGATGGGACTTGAGTTTGCTGACACCAATAGAGGGCCAGCCCTaGGTTGGGTGTCAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: LLHWMVLKKGWDLSLLTPIEGQP*VGCQAR
Trigger: CCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTAT...TGGTGTCAGCAAACTCAAGTCCCATCCCTTTTTCAGTACCATCCAATGGAGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553315.1
CDS-3UTR CCA 90 bp CCCACCTTCCTTGAGCCTGTCAAGCCATACTCTAGAATAGAGAATTTGGGGTCAGTCTGGTCTGACAGTTaGGCCTTCAGAGCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: PTFLEPVKPYSRIENLGSVWSDS*AFRARH
Trigger: GTGCCTGGCTCTGAAGGCCCAACTGTCAGACCAGAC...TGACCCCAAATTCTCTATTCTAGAGTATGGCTTGACAGGCTCAAGGAAGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp GACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTCAGTCAGAGCAGGCTTTATTaGGGCCGTGTAAACCCCAGG +
Preference number: 4 (lower is better)
Translates to: DHRESCTGCAFTCLLCLSQSRLY*GRVNPR
Trigger: CCTGGGGTTTACACGGCCCCAATAAAGCCTGCTCTG...ACTGAGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GAGTGGGGGCATCTCATTTCATTTGGATTTGATAGCCTTGTGGACCAAGATGCTCTGCGTCCTACTTCCTaGCAGCCCCAAGCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: EWGHLISFGFDSLVDQDALRPTS*QPQARS
Trigger: AGAGCGAGCTTGGGGCTGCCAGGAAGTAGGACGCAG...AGCATCTTGGTCCACAAGGCTATCAAATCCAAATGAAATGAGATGCCCCCACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR TCA 90 bp CCCACCTTCCTTGAGCCTGTCAAGCCATACTCTAGAATAGAGAATTTGGGGTCACCCCAAGCTCGCTCTTaGCTTCACTCTGGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PTFLEPVKPYSRIENLGSPQARS*LHSGAS
Trigger: AGAAGCTCCAGAGTGAAGTCAAGAGCGAGCTTGGGG...TGACCCCAAATTCTCTATTCTAGAGTATGGCTTGACAGGCTCAAGGAAGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp CCCACCTTCCTTGAGCCTGTCAAGCCATACTCTAGAATAGAGAATTTGGGGTCACTGTTGTCTCCTCCCTaGTCCTCCTGTGGGAATCTC +
Preference number: 4 (lower is better)
Translates to: PTFLEPVKPYSRIENLGSLLSPP*SSCGNL
Trigger: GAGATTCCCACAGGAGGAGCAGGGAGGAGACAACAG...TGACCCCAAATTCTCTATTCTAGAGTATGGCTTGACAGGCTCAAGGAAGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp CTGGAGGCAATTGTCTTTGAGGTAACCACTCACCCCAGCTTTTCAGAGACCAGACACGCTGGGCTCAAATaGTGTTCCTCATGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: LEAIVFEVTTHPSFSETRHAGLK*CSSCCS
Trigger: GGAACAGCATGAGGAACAGCATTTGAGCCCAGCGTG...TCTGGTCTCTGAAAAGCTGGGGTGAGTGGTTACCTCAAAGACAATTGCCTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp GAGTGGGGGCATCTCATTTCATTTGGATTTGATAGCCTTGTGGACCAAGATGCTTGGGGTCAACGTGTATaGCACGGAGCAGCACGTCCA +
Preference number: 4 (lower is better)
Translates to: EWGHLISFGFDSLVDQDAWGQRV*HGAARP
Trigger: TGGACGTGCTGCTCCGTGGCATACACGTTGACCCCA...AGCATCTTGGTCCACAAGGCTATCAAATCCAAATGAAATGAGATGCCCCCACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp CCATGCGTTTTGTGGTTTCTTATCCCAAAAGGGCATGAAGTCACAGTAGGCAGTGGTGGGACCAGAGAGTaGCTCCTTGCACATGCTCCA +
Preference number: 4 (lower is better)
Translates to: PCVLWFLIPKGHEVTVGSGGTRE*LLAHAP
Trigger: TGGAGCATGTGCAAGGAGGCACTCTCTGGTCCCACC...ACTGCCTACTGTGACTTCATGCCCTTTTGGGATAAGAAACCACAAAACGCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp TTCTGGCTAAGAGCCATGGATAGTTGTTCCATGCGTTTTGTGGTTTCTTATCCCCGCTACCAGCATCTCTaGCGCCCACTGCTTCACCTG +
Preference number: 4 (lower is better)
Translates to: FWLRAMDSCSMRFVVSYPRYQHL*RPLLHL
Trigger: CAGGTGAAGCAGTGGGCGGCAGAGATGCTGGTAGCG...GGGATAAGAAACCACAAAACGCATGGAACAACTATCCATGGCTCTTAGCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CATGAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTTTCTGGTTTCAGACTTaGTCTAAGGGGCAGACCCAT +
Preference number: 4 (lower is better)
Translates to: HEVTVGSDMVNSQGLRGSFWFQT*SKGQTH
Trigger: ATGGGTCTGCCCCTTAGAGCAAGTCTGAAACCAGAA...ACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR GCA 90 bp AGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCACACCTTGTCTAAACTaGTTTGGCCTGGAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: RGRTWTTESHVQAALSLVTPCLN*FGLEAE
Trigger: TTCAGCTTCCAGGCCAAAGCAGTTTAGACAAGGTGT...GACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR GCA 90 bp AACAGCTTCTGGTGGAAGAGGCCTACTCGCTGTGTGACTAAGAGGACTAGCCAGGAGTCATGTACAGGCTaGGCTTTCACTTGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: NSFWWKRPTRCVTKRTSQESCTG*AFTCLL
Trigger: GAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTC...CTGGCTAGTCCTCTTAGTCACACAGCGAGTAGGCCTCTTCCACCAGAAGCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp AACAGCTTCTGGTGGAAGAGGCCTACTCGCTGTGTGACTAAGAGGACTAGCCAGTCCGTAGAGCAAGCTTaGTATCCAGTACGCATTCAG +
Preference number: 4 (lower is better)
Translates to: NSFWWKRPTRCVTKRTSQSVEQA*YPVRIQ
Trigger: CTGAATGCGTACTGGATACCAAGCTTGCTCTACGGA...CTGGCTAGTCCTCTTAGTCACACAGCGAGTAGGCCTCTTCCACCAGAAGCTGTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp AGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTACTGTGTTGAGCTCTaGAGAGAGCTGAGGATATCT +
Preference number: 4 (lower is better)
Translates to: RGRTWTTESHVQAALSLVYCVEL*RELRIS
Trigger: AGATATCCTCAGCTCTCTCCAGAGCTCAACACAGTA...GACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTCAGTCCAGGTGCAGGAAGATaGAGTCCTCGCTCACAAAGT +
Preference number: 4 (lower is better)
Translates to: DHRESCTGCAFTCLLCLSPGAGR*SPRSQS
Trigger: ACTTTGTGAGCGAGGACTCCATCTTCCTGCACCTGG...ACTGAGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CCATGCGTTTTGTGGTTTCTTATCCCAAAAGGGCATGAAGTCACAGTAGGCAGTGCCTTCATCCTCTCCTaGGTAGAGCCAGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: PCVLWFLIPKGHEVTVGSAFILS*VEPELS
Trigger: GCTCAGCTCTGGCTCTACCCAGGAGAGGATGAAGGC...ACTGCCTACTGTGACTTCATGCCCTTTTGGGATAAGAAACCACAAAACGCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GTCCTTAACCTTTTTGAGCTTCAGTTTTCTCAGGAGCTACCGTCTGTTGCAAGGCAGAGGTGCTGGTCCTaGCTGTGGGTTCACCTTCAG +
Preference number: 4 (lower is better)
Translates to: VLNLFELQFSQELPSVARQRCWS*LWVHLQ
Trigger: CTGAAGGTGAACCCACAGCCAGGACCAGCACCTCTG...CCTTGCAACAGACGGTAGCTCCTGAGAAAACTGAAGCTCAAAAAGGTTAAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp TTCTGGCTAAGAGCCATGGATAGTTGTTCCATGCGTTTTGTGGTTTCTTATCCCAGGAGCCAGAGGTGCTaGTCCTGGCTGTGGGTTCAC +
Preference number: 4 (lower is better)
Translates to: FWLRAMDSCSMRFVVSYPRSQRC*SWLWVH
Trigger: GTGAACCCACAGCCAGGACCAGCACCTCTGGCTCCT...GGGATAAGAAACCACAAAACGCATGGAACAACTATCCATGGCTCTTAGCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTCAGTTGGATTCCTGAAGGGTaGCTCTGGGACAGTGCCATT +
Preference number: 4 (lower is better)
Translates to: DHRESCTGCAFTCLLCLSWIPEG*LWDSAI
Trigger: AATGGCACTGTCCCAGAGCCACCCTTCAGGAATCCA...ACTGAGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp TTCTGGCTAAGAGCCATGGATAGTTGTTCCATGCGTTTTGTGGTTTCTTATCCCAGCTGGAGCTGGGTGTaGGCCTGGATTCCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: FWLRAMDSCSMRFVVSYPSWSWV*AWIPEG
Trigger: CCCTTCAGGAATCCAGGCCCACACCCAGCTCCAGCT...GGGATAAGAAACCACAAAACGCATGGAACAACTATCCATGGCTCTTAGCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTCCTGATATGTGTAGCTTTGGGTaGATGAAGCACAGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: VTVGSDMVNSQGLRGSPDMCSFG*MKHRSS
Trigger: GGAACTTCTGTGCTTCATCCACCCAAAGCTACACAT...ATCAGGACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp AGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTCAGTCTCCTGCGTGAGTGTACAGGGTaGGTAGCTAACCTAGACTGC +
Preference number: 4 (lower is better)
Translates to: RESCTGCAFTCLLCLSLLRECTG*VANLDC
Trigger: GCAGTCTAGGTTAGCTACCCACCCTGTACACTCACG...CAGGAGACTGAGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp CGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTATAATGAGGAATGGCTaGCTCCCTCTTCCCACCATG +
Preference number: 4 (lower is better)
Translates to: RGPQRVMYRLRFHLSSLSIMRNG*LPLPTM
Trigger: CATGGTGGGAAGAGGGAGCCAGCCATTCCTCATTAT...AGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp CTCTTAGGAGATCCTGAGAACATGTGTCCAGGGTCGTCTGGCTACAACTTAGTTAGCAGAGCACAGAGCTaGGCTGTAAGAACTGCCCGA +
Preference number: 4 (lower is better)
Translates to: LLGDPENMCPGSSGYNLVSRAQS*AVRTAR
Trigger: TCGGGCAGTTCTTACAGCCCAGCTCTGTGCTCTGCT...AACTAAGTTGTAGCCAGACGACCCTGGACACATGTTCTCAGGATCTCCTAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557413.6
CDS-3UTR TCA 90 bp CCATGCGTTTTGTGGTTTCTTATCCCAAAAGGGCATGAAGTCACAGTAGGCAGTTTGTTCCCTTGGTCCTaGGGTCAGTGTGGTCAGCGA +
Preference number: 4 (lower is better)
Translates to: PCVLWFLIPKGHEVTVGSLFPWS*GQCGQR
Trigger: TCGCTGACCACACTGACCTCAGGACCAAGGGAACAA...ACTGCCTACTGTGACTTCATGCCCTTTTGGGATAAGAAACCACAAAACGCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CTGGAGGCAATTGTCTTTGAGGTAACCACTCACCCCAGCTTTTCAGAGACCAGAAGTGGATCAGTGTCCTaGGATGAGTCTCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: LEAIVFEVTTHPSFSETRSGSVS*DESPEM
Trigger: CATCTCTGGAGACTCATCTCAGGACACTGATCCACT...TCTGGTCTCTGAAAAGCTGGGGTGAGTGGTTACCTCAAAGACAATTGCCTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CTCTTAGGAGATCCTGAGAACATGTGTCCAGGGTCGTCTGGCTACAACTTAGTTGGAGGCAATTGTCTTTaGGGTAACCACTCACCCCAG +
Preference number: 4 (lower is better)
Translates to: LLGDPENMCPGSSGYNLVGGNCL*GNHSPQ
Trigger: CTGGGGTGAGTGGTTACCTCAAAGACAATTGCCTCC...AACTAAGTTGTAGCCAGACGACCCTGGACACATGTTCTCAGGATCTCCTAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR TCA 90 bp GAGTGGGGGCATCTCATTTCATTTGGATTTGATAGCCTTGTGGACCAAGATGCTGGGACTTGTGCTTCATaGAGCGGTGGTTGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: EWGHLISFGFDSLVDQDAGTCAS*SGGWKW
Trigger: CCACTTCCAACCACCGCTTCATGAAGCACAAGTCCC...AGCATCTTGGTCCACAAGGCTATCAAATCCAAATGAAATGAGATGCCCCCACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp TTCTGGCTAAGAGCCATGGATAGTTGTTCCATGCGTTTTGTGGTTTCTTATCCCATCTCTGCCGCCCACTaGTTCACCTGCTCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: FWLRAMDSCSMRFVVSYPISAAH*FTCSSL
Trigger: GAGAGAGGAGCAGGTGAAGCAGTGGGCGGCAGAGAT...GGGATAAGAAACCACAAAACGCATGGAACAACTATCCATGGCTCTTAGCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR GCA 90 bp TTCTGGCTAAGAGCCATGGATAGTTGTTCCATGCGTTTTGTGGTTTCTTATCCCCGGGTAGGCTCGAACTaGAGCAGCTCAGTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: FWLRAMDSCSMRFVVSYPRVGSN*SSSVSR
Trigger: TCTGCTGACTGAGCTGCTGCAGTTCGAGCCTACCCG...GGGATAAGAAACCACAAAACGCATGGAACAACTATCCATGGCTCTTAGCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CTCTTAGGAGATCCTGAGAACATGTGTCCAGGGTCGTCTGGCTACAACTTAGTTACAGCTCAGCGCCAGTaGCACAGAAGGCAACCTTTA +
Preference number: 4 (lower is better)
Translates to: LLGDPENMCPGSSGYNLVTAQRQ*HRRQPL
Trigger: TAAAGGTTGCCTTCTGTGGCACTGGCGCTGAGCTGT...AACTAAGTTGTAGCCAGACGACCCTGGACACATGTTCTCAGGATCTCCTAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp CCTGAGAGGGAGTCCTCATCCCTCCCTGCACAACAGATGGCATCCCTGCTTCTGTGGATAGTTGTTCCATaGGTTTTGTGGTTTCTTATC +
Preference number: 4 (lower is better)
Translates to: PERESSSLPAQQMASLLLWIVVP*VLWFLI
Trigger: GATAAGAAACCACAAAACGCATGGAACAACTATCCA...CAGAAGCAGGGATGCCATCTGTTGTGCAGGGAGGGATGAGGACTCCCTCTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555009.5
CDS-3UTR CCA 90 bp CCCACCTTCCTTGAGCCTGTCAAGCCATACTCTAGAATAGAGAATTTGGGGTCACCAGGTGCAGGAAGATaGAGTCCTCGCTCACAAAGT +
Preference number: 4 (lower is better)
Translates to: PTFLEPVKPYSRIENLGSPGAGR*SPRSQS
Trigger: ACTTTGTGAGCGAGGACTCCATCTTCCTGCACCTGG...TGACCCCAAATTCTCTATTCTAGAGTATGGCTTGACAGGCTCAAGGAAGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp GAGTGGGGGCATCTCATTTCATTTGGATTTGATAGCCTTGTGGACCAAGATGCTAATCCCACCCACCTCTaGGGCGCTGTAGAGATTGTC +
Preference number: 4 (lower is better)
Translates to: EWGHLISFGFDSLVDQDANPTHL*GAVEIV
Trigger: GACAATCTCTACAGCGCCCCAGAGGTGGGTGGGATT...AGCATCTTGGTCCACAAGGCTATCAAATCCAAATGAAATGAGATGCCCCCACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp AACAGCTTCTGGTGGAAGAGGCCTACTCGCTGTGTGACTAAGAGGACTAGCCAGACCAGCTTGCTCCATTaGATGGTACTGAAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: NSFWWKRPTRCVTKRTSQTSLLH*MVLKKG
Trigger: TCCCTTTTTCAGTACCATCCAATGGAGCAAGCTGGT...CTGGCTAGTCCTCTTAGTCACACAGCGAGTAGGCCTCTTCCACCAGAAGCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GTCCTTAACCTTTTTGAGCTTCAGTTTTCTCAGGAGCTACCGTCTGTTGCAAGGTGCACGAACAGCTTCTaGTGGAAGAGGCCTACTCGC +
Preference number: 4 (lower is better)
Translates to: VLNLFELQFSQELPSVARCTNSF*WKRPTR
Trigger: GCGAGTAGGCCTCTTCCACCAGAAGCTGTTCGTGCA...CCTTGCAACAGACGGTAGCTCCTGAGAAAACTGAAGCTCAAAAAGGTTAAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp GTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTCCTGATGTTCCATGCGTTTTGTaGTTTCTTATCCCAAAAGGG +
Preference number: 4 (lower is better)
Translates to: VTVGSDMVNSQGLRGSPDVPCVL*FLIPKG
Trigger: CCCTTTTGGGATAAGAAACCACAAAACGCATGGAAC...ATCAGGACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CTCTTAGGAGATCCTGAGAACATGTGTCCAGGGTCGTCTGGCTACAACTTAGTTGAGGAGCCCCCAAACTaGAGGCAATTGTCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: LLGDPENMCPGSSGYNLVEEPPN*RQLSLR
Trigger: CCTCAAAGACAATTGCCTCCAGTTTGGGGGCTCCTC...AACTAAGTTGTAGCCAGACGACCCTGGACACATGTTCTCAGGATCTCCTAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp CCCACCTTCCTTGAGCCTGTCAAGCCATACTCTAGAATAGAGAATTTGGGGTCAGAGGAGCCCCCAAACTaGAGGCAATTGTCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: PTFLEPVKPYSRIENLGSEEPPN*RQLSLR
Trigger: CCTCAAAGACAATTGCCTCCAGTTTGGGGGCTCCTC...TGACCCCAAATTCTCTATTCTAGAGTATGGCTTGACAGGCTCAAGGAAGGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp TTCTGGCTAAGAGCCATGGATAGTTGTTCCATGCGTTTTGTGGTTTCTTATCCCGTCTGGTCTGACAGTTaGGCCTTCAGAGCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: FWLRAMDSCSMRFVVSYPVWSDS*AFRARH
Trigger: GTGCCTGGCTCTGAAGGCCCAACTGTCAGACCAGAC...GGGATAAGAAACCACAAAACGCATGGAACAACTATCCATGGCTCTTAGCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTCCTACTAACTTGCAACTCTaGCTAGGTTGTGTCCTTAAC +
Preference number: 4 (lower is better)
Translates to: EVTVGSDMVNSQGLRGSPTNLQL*LGCVLN
Trigger: GTTAAGGACACAACCTAGCCAGAGTTGCAAGTTAGT...AGGACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp AGTATAATGAGGAATGGCTGGCTCCCTCTTCCCACCATGGCCCGAACTAGCGTTGTCGACTGTAAGAGCTaGGACCCACAGTATTCTAAA +
Preference number: 4 (lower is better)
Translates to: SIMRNGWLPLPTMARTSVVDCKS*DPQYSK
Trigger: TTTAGAATACTGTGGGTCCCAGCTCTTACAGTCGAC...AACGCTAGTTCGGGCCATGGTGGGAAGAGGGAGCCAGCCATTCCTCATTATACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp CCAAAAGGGCATGAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGGATTTGATAGCCTTGTaGACCAAGATGCTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: PKGHEVTVGSDMVNSQGLDLIAL*TKMLKV
Trigger: GACCTTGAGCATCTTGGTCCACAAGGCTATCAAATC...CAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTCATGCCCTTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp GACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTCAGTATAATGAGGAATGGCTaGCTCCCTCTTCCCACCATG +
Preference number: 4 (lower is better)
Translates to: DHRESCTGCAFTCLLCLSIMRNG*LPLPTM
Trigger: CATGGTGGGAAGAGGGAGCCAGCCATTCCTCATTAT...ACTGAGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR TCA 90 bp CCCACCTTCCTTGAGCCTGTCAAGCCATACTCTAGAATAGAGAATTTGGGGTCACAACCTTTAACATGGTaGGTCCACATGCTCAACGGG +
Preference number: 4 (lower is better)
Translates to: PTFLEPVKPYSRIENLGSQPLTW*VHMLNG
Trigger: CCCGTTGAGCATGTGGACTCACCATGTTAAAGGTTG...TGACCCCAAATTCTCTATTCTAGAGTATGGCTTGACAGGCTCAAGGAAGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR TCA 90 bp GACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTCAGTGTAGCTTTGGGTGGATaGAGCACAGAAGTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: DHRESCTGCAFTCLLCLSVALGG*STEVPE
Trigger: TTCTGGAACTTCTGTGCTTCATCCACCCAAAGCTAC...ACTGAGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR TCA 90 bp CTCTTAGGAGATCCTGAGAACATGTGTCCAGGGTCGTCTGGCTACAACTTAGTTACTTTGGAATACCCTTaGCTGAGACGAGGGGTCCAT +
Preference number: 4 (lower is better)
Translates to: LLGDPENMCPGSSGYNLVTLEYP*LRRGVH
Trigger: ATGGACCCCTCGTCTCAGTCAAGGGTATTCCAAAGT...AACTAAGTTGTAGCCAGACGACCCTGGACACATGTTCTCAGGATCTCCTAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp CTTGCTCCATTGGATGGTACTGAAAAAGGGATGGGACTTGAGTTTGCTGACACCGTAGATGGTTCAAGCTaGTTAGCAGGGCAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: LAPLDGTEKGMGLEFADTVDGSS*LAGQAL
Trigger: CAAGGCTTGCCCTGCTAAGCAGCTTGAACCATCTAC...GGTGTCAGCAAACTCAAGTCCCATCCCTTTTTCAGTACCATCCAATGGAGCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553315.1
CDS-3UTR GCA 90 bp CATTGGATGGTACTGAAAAAGGGATGGGACTTGAGTTTGCTGACACCACCTTCTACAGCTCAGCGCCAGTaGCACAGAAGGCAACCTTTA +
Preference number: 4 (lower is better)
Translates to: HWMVLKKGWDLSLLTPPSTAQRQ*HRRQPL
Trigger: TAAAGGTTGCCTTCTGTGGCACTGGCGCTGAGCTGT...AGAAGGTGGTGTCAGCAAACTCAAGTCCCATCCCTTTTTCAGTACCATCCAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553315.1
CDS-3UTR GCA 90 bp CTGGAGGCAATTGTCTTTGAGGTAACCACTCACCCCAGCTTTTCAGAGACCAGATCTTCCCCTCCCTTTTaGTCTCCCAAGTCTGAAATC +
Preference number: 4 (lower is better)
Translates to: LEAIVFEVTTHPSFSETRSSPPF*SPKSEI
Trigger: GATTTCAGACTTGGGAGAGCAAAAGGGAGGGGAAGA...TCTGGTCTCTGAAAAGCTGGGGTGAGTGGTTACCTCAAAGACAATTGCCTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTACACCTTGTCTAAACTaGTTTGGCCTGGAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: RGPQRVMYRLRFHLSSLSTPCLN*FGLEAE
Trigger: TTCAGCTTCCAGGCCAAAGCAGTTTAGACAAGGTGT...AGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR GCA 90 bp GTGGGGCACAACATGGCAGTGAGTGAGTCACAGAACCTCACAGTAGGGTGCAGCTGGATAGTTGTTCCATaGGTTTTGTGGTTTCTTATC +
Preference number: 4 (lower is better)
Translates to: VGHNMAVSESQNLTVGCSWIVVP*VLWFLI
Trigger: GATAAGAAACCACAAAACGCATGGAACAACTATCCA...GCTGCACCCTACTGTGAGGTTCTGTGACTCACTCACTGCCATGTTGTGCCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR GCA 90 bp CCATGCGTTTTGTGGTTTCTTATCCCAAAAGGGCATGAAGTCACAGTAGGCAGTCATGGTGAGTCCACATaGTCAACGGGTCTGTTGACC +
Preference number: 4 (lower is better)
Translates to: PCVLWFLIPKGHEVTVGSHGEST*STGLLT
Trigger: GGTCAACAGACCCGTTGAGCATGTGGACTCACCATG...ACTGCCTACTGTGACTTCATGCCCTTTTGGGATAAGAAACCACAAAACGCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555910.5
CDS-3UTR CCA 90 bp TACATTTTAGGGAGACATAAGATACCAGTCAGTACATGTAAGATGTACAGTGGTGGGCCAGCCCTGGGTTaGGTGTCAGGCAAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: YILGRHKIPVSTCKMYSGGPALG*VSGKEE
Trigger: CTCCTCCTTGCCTGACACCCAACCCAGGGCTGGCCC...ACCACTGTACATCTTACATGTACTGACTGGTATCTTATGTCTCCCTAAAATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp GACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTGAGGCAAGACATTTCTaGCTAAGAGCCATGGATAGT +
Preference number: 4 (lower is better)
Translates to: DVDHRESCTGCAFTCLLCEARHF*LRAMDS
Trigger: ACTATCCATGGCTCTTAGCCAGAAATGTCTTGCCTC...ACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CCATGCGTTTTGTGGTTTCTTATCCCAAAAGGGCATGAAGTCACAGTAGGCAGTGAGGAGCCCCCAAACTaGAGGCAATTGTCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: PCVLWFLIPKGHEVTVGSEEPPN*RQLSLR
Trigger: CCTCAAAGACAATTGCCTCCAGTTTGGGGGCTCCTC...ACTGCCTACTGTGACTTCATGCCCTTTTGGGATAAGAAACCACAAAACGCATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp CCATGCGTTTTGTGGTTTCTTATCCCAAAAGGGCATGAAGTCACAGTAGGCAGTCTCTTGACTTCACTCTaGAGCTTCTACAGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: PCVLWFLIPKGHEVTVGSLLTSL*SFYRGA
Trigger: GGCTCCCCTGTAGAAGCTCCAGAGTGAAGTCAAGAG...ACTGCCTACTGTGACTTCATGCCCTTTTGGGATAAGAAACCACAAAACGCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp GTCCTTAACCTTTTTGAGCTTCAGTTTTCTCAGGAGCTACCGTCTGTTGCAAGGTGCTTCATGAAGCGGTaGTTGGAAGTGGTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: VLNLFELQFSQELPSVARCFMKR*LEVVQP
Trigger: AGGCTGGACCACTTCCAACCACCGCTTCATGAAGCA...CCTTGCAACAGACGGTAGCTCCTGAGAAAACTGAAGCTCAAAAAGGTTAAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR TCA 90 bp CCATGCGTTTTGTGGTTTCTTATCCCAAAAGGGCATGAAGTCACAGTAGGCAGTCATTCTGATAGTGGTTaGAGGCCGCCTCATAGTCCT +
Preference number: 4 (lower is better)
Translates to: PCVLWFLIPKGHEVTVGSHSDSG*RPPHSP
Trigger: AGGACTATGAGGCGGCCTTCAACCACTATCAGAATG...ACTGCCTACTGTGACTTCATGCCCTTTTGGGATAAGAAACCACAAAACGCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR TCA 90 bp CCCACCTTCCTTGAGCCTGTCAAGCCATACTCTAGAATAGAGAATTTGGGGTCAGTAGCTTTGGGTGGATaGAGCACAGAAGTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: PTFLEPVKPYSRIENLGSVALGG*STEVPE
Trigger: TTCTGGAACTTCTGTGCTTCATCCACCCAAAGCTAC...TGACCCCAAATTCTCTATTCTAGAGTATGGCTTGACAGGCTCAAGGAAGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp TACATTTTAGGGAGACATAAGATACCAGTCAGTACATGTAAGATGTACAGTGGTGGCAGCTCTGATCCATaGCTCGGCCACAGCCCCCTA +
Preference number: 4 (lower is better)
Translates to: YILGRHKIPVSTCKMYSGGSSDP*LGHSPL
Trigger: TAGGGGGCTGTGGCCGAGGCATGGATCAGAGCTGCC...ACCACTGTACATCTTACATGTACTGACTGGTATCTTATGTCTCCCTAAAATGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp GTCCTTAACCTTTTTGAGCTTCAGTTTTCTCAGGAGCTACCGTCTGTTGCAAGGGTAGATGGTTCAAGCTaGTTAGCAGGGCAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: VLNLFELQFSQELPSVARVDGSS*LAGQAL
Trigger: CAAGGCTTGCCCTGCTAAGCAGCTTGAACCATCTAC...CCTTGCAACAGACGGTAGCTCCTGAGAAAACTGAAGCTCAAAAAGGTTAAGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp CCCACCTTCCTTGAGCCTGTCAAGCCATACTCTAGAATAGAGAATTTGGGGTCAATGAGCCGTGGTCATTaGATGGAAGAAGCGAGAACA +
Preference number: 4 (lower is better)
Translates to: PTFLEPVKPYSRIENLGSMSRGH*MEEART
Trigger: TGTTCTCGCTTCTTCCATGCAATGACCACGGCTCAT...TGACCCCAAATTCTCTATTCTAGAGTATGGCTTGACAGGCTCAAGGAAGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp GACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTCAGTACCAGCTTGCTCCATTaGATGGTACTGAAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: DHRESCTGCAFTCLLCLSTSLLH*MVLKKG
Trigger: TCCCTTTTTCAGTACCATCCAATGGAGCAAGCTGGT...ACTGAGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp GTCCTTAACCTTTTTGAGCTTCAGTTTTCTCAGGAGCTACCGTCTGTTGCAAGGAGATGTACAGTGGTTTaGTCTGGAGAGGCAGGACAG +
Preference number: 4 (lower is better)
Translates to: VLNLFELQFSQELPSVARRCTVV*SGEAGQ
Trigger: CTGTCCTGCCTCTCCAGACCAAACCACTGTACATCT...CCTTGCAACAGACGGTAGCTCCTGAGAAAACTGAAGCTCAAAAAGGTTAAGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp TACATTTTAGGGAGACATAAGATACCAGTCAGTACATGTAAGATGTACAGTGGTAGCTGGGTGTGGGCCTaGATTCCTGAAGGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: YILGRHKIPVSTCKMYSGSWVWA*IPEGWL
Trigger: GAGCCACCCTTCAGGAATCCAGGCCCACACCCAGCT...ACCACTGTACATCTTACATGTACTGACTGGTATCTTATGTCTCCCTAAAATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR TCA 90 bp TACATTTTAGGGAGACATAAGATACCAGTCAGTACATGTAAGATGTACAGTGGTTTCCCCCAGGCACCATaGGCCTCTTCCAAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: YILGRHKIPVSTCKMYSGFPQAP*ASSKAS
Trigger: AGAAGCCTTGGAAGAGGCTCATGGTGCCTGGGGGAA...ACCACTGTACATCTTACATGTACTGACTGGTATCTTATGTCTCCCTAAAATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp TTCTGGCTAAGAGCCATGGATAGTTGTTCCATGCGTTTTGTGGTTTCTTATCCCTCCCTGCTCCTCCTGTaGGAATCTCATTTACCCTTT +
Preference number: 4 (lower is better)
Translates to: FWLRAMDSCSMRFVVSYPSLLLL*ESHLPF
Trigger: AAAGGGTAAATGAGATTCCCACAGGAGGAGCAGGGA...GGGATAAGAAACCACAAAACGCATGGAACAACTATCCATGGCTCTTAGCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp TTCTGGCTAAGAGCCATGGATAGTTGTTCCATGCGTTTTGTGGTTTCTTATCCCTCCGTAGAGCAAGCTTaGTATCCAGTACGCATTCAG +
Preference number: 4 (lower is better)
Translates to: FWLRAMDSCSMRFVVSYPSVEQA*YPVRIQ
Trigger: CTGAATGCGTACTGGATACCAAGCTTGCTCTACGGA...GGGATAAGAAACCACAAAACGCATGGAACAACTATCCATGGCTCTTAGCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR TCA 90 bp TACATTTTAGGGAGACATAAGATACCAGTCAGTACATGTAAGATGTACAGTGGTTGCAGGTGGCAGGTGTaGTGGAGTCCAGGCTTAAAC +
Preference number: 4 (lower is better)
Translates to: YILGRHKIPVSTCKMYSGCRWQV*WSPGLN
Trigger: GTTTAAGCCTGGACTCCATCACACCTGCCACCTGCA...ACCACTGTACATCTTACATGTACTGACTGGTATCTTATGTCTCCCTAAAATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR GCA 90 bp CTGGAGGCAATTGTCTTTGAGGTAACCACTCACCCCAGCTTTTCAGAGACCAGATGGATAGTTGTTCCATaGGTTTTGTGGTTTCTTATC +
Preference number: 4 (lower is better)
Translates to: LEAIVFEVTTHPSFSETRWIVVP*VLWFLI
Trigger: GATAAGAAACCACAAAACGCATGGAACAACTATCCA...TCTGGTCTCTGAAAAGCTGGGGTGAGTGGTTACCTCAAAGACAATTGCCTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp TACATTTTAGGGAGACATAAGATACCAGTCAGTACATGTAAGATGTACAGTGGTTCCACCTCTGACCACTaGCCAAAATATGTGAGCCGG +
Preference number: 4 (lower is better)
Translates to: YILGRHKIPVSTCKMYSGSTSDH*PKYVSR
Trigger: CCGGCTCACATATTTTGGCCAGTGGTCAGAGGTGGA...ACCACTGTACATCTTACATGTACTGACTGGTATCTTATGTCTCCCTAAAATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CCA 90 bp TTCTGGCTAAGAGCCATGGATAGTTGTTCCATGCGTTTTGTGGTTTCTTATCCCGTACTGAAAAAGGGATaGGACTTGAGTTTGCTGACA +
Preference number: 4 (lower is better)
Translates to: FWLRAMDSCSMRFVVSYPVLKKG*DLSLLT
Trigger: TGTCAGCAAACTCAAGTCCCATCCCTTTTTCAGTAC...GGGATAAGAAACCACAAAACGCATGGAACAACTATCCATGGCTCTTAGCCAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp TTCTGGCTAAGAGCCATGGATAGTTGTTCCATGCGTTTTGTGGTTTCTTATCCCGTTCCATGCGTTTTGTaGTTTCTTATCCCAAAAGGG +
Preference number: 4 (lower is better)
Translates to: FWLRAMDSCSMRFVVSYPVPCVL*FLIPKG
Trigger: CCCTTTTGGGATAAGAAACCACAAAACGCATGGAAC...GGGATAAGAAACCACAAAACGCATGGAACAACTATCCATGGCTCTTAGCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CCA 90 bp TACATTTTAGGGAGACATAAGATACCAGTCAGTACATGTAAGATGTACAGTGGTTGGATTTGGGAGGAGTaGGGGCATCTCATTTCATTT +
Preference number: 4 (lower is better)
Translates to: YILGRHKIPVSTCKMYSGWIWEE*GHLISF
Trigger: AAATGAAATGAGATGCCCCCACTCCTCCCAAATCCA...ACCACTGTACATCTTACATGTACTGACTGGTATCTTATGTCTCCCTAAAATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS CCA 90 bp GGCCACCAGGCTCATGGCTGCCCTGCAGCTGGGACCTGCCCGAGCTaGGAGCCGGGTCCGCGGGCCAGGCCTCCCCCTCACGTACCGGCC +
Preference number: 5 (lower is better)
Translates to: GHQAHGCPAAGTCPS*EPGPRARPPPHVPA
Trigger: GGCCGGTACGTGAGGGGGAGGCCTGGCCCGCGGACCCGGCTCCCAGCTCGGGCAGGTCCCAGCTGCAGGGCAGCCATGAGCCTGGTGGCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555834.5
CDS GCA 90 bp CGGGGCTGGGCAGGCACTCACAGGCCACCAGGCTCATGGCTGCCCTaGAGCTGGGACCTGCCCGAGCTGGGAGCCGGGTCCGCGGGCCAG +
Preference number: 5 (lower is better)
Translates to: RGWAGTHRPPGSWLP*SWDLPELGAGSAGQ
Trigger: CTGGCCCGCGGACCCGGCTCCCAGCTCGGGCAGGTCCCAGCTGCAGGGCAGCCATGAGCCTGGTGGCCTGTGAGTGCCTGCCCAGCCCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555834.5
CDS GCA 90 bp CAGGCCGGGGCTGGGCAGGCACTCACAGGCCACCAGGCTCATGGCTaGCCTGCAGCTGGGACCTGCCCGAGCTGGGAGCCGGGTCCGCGG +
Preference number: 5 (lower is better)
Translates to: QAGAGQALTGHQAHG*PAAGTCPSWEPGPR
Trigger: CCGCGGACCCGGCTCCCAGCTCGGGCAGGTCCCAGCTGCAGGGCAGCCATGAGCCTGGTGGCCTGTGAGTGCCTGCCCAGCCCCGGCCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555834.5
CDS CCA 90 bp GCTCCAGGCCGGGGCTGGGCAGGCACTCACAGGCCACCAGGCTCATaGCTGCCCTGCAGCTGGGACCTGCCCGAGCTGGGAGCCGGGTCC +
Preference number: 5 (lower is better)
Translates to: APGRGWAGTHRPPGS*LPCSWDLPELGAGS
Trigger: GGACCCGGCTCCCAGCTCGGGCAGGTCCCAGCTGCAGGGCAGCCATGAGCCTGGTGGCCTGTGAGTGCCTGCCCAGCCCCGGCCTGGAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555834.5
CDS GCA 90 bp TCCAGGAGCAGGTTCCCGGGGTGGAGGTCCCGGCACAGCACCCCCTaGTCGTGCAGCGCCTCCAGCGCTACCAGCATCTCTGCCGCCCAC +
Preference number: 5 (lower is better)
Translates to: SRSRFPGWRSRHSTP*SCSASSATSISAAH
Trigger: GTGGGCGGCAGAGATGCTGGTAGCGCTGGAGGCGCTGCACGAGCAGGGGGTGCTGTGCCGGGACCTCCACCCCGGGAACCTGCTCCTGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354625.6
ENST00000553646.1
ENST00000555009.5
ENST00000555647.5
ENST00000555834.5
ENST00000556848.5
ENST00000557413.6
CDS GCA 90 bp AGCAGGTTCCCGGGGTGGAGGTCCCGGCACAGCACCCCCTGCTCGTaGAGCGCCTCCAGCGCTACCAGCATCTCTGCCGCCCACTGCTTC +
Preference number: 5 (lower is better)
Translates to: SRFPGWRSRHSTPCS*SASSATSISAAHCF
Trigger: GAAGCAGTGGGCGGCAGAGATGCTGGTAGCGCTGGAGGCGCTGCACGAGCAGGGGGTGCTGTGCCGGGACCTCCACCCCGGGAACCTGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354625.6
ENST00000553646.1
ENST00000555009.5
ENST00000555647.5
ENST00000555834.5
ENST00000556848.5
ENST00000557413.6
CDS GCA 90 bp AGCTGCACCTTCTCGATGACCCCGACCACCCTGCAGCCCCTCAGCTaGTCCACGGCAGAGCTCAGCGTGCGAATGGGCCGGAGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: SCTFSMTPTTLQPLS*STAELSVRMGRSLR
Trigger: CCTGAGGCTCCGGCCCATTCGCACGCTGAGCTCTGCCGTGGAGCAGCTGAGGGGCTGCAGGGTGGTCGGGGTCATCGAGAAGGTGCAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354625.6
ENST00000553894.6
ENST00000554900.1
ENST00000555647.5
ENST00000555834.5
ENST00000557413.6
CDS GCA 90 bp CCGCCCACTGCTTCACCTGCTCCTCTCTCACACTCCAGGTGGCCCTaGCACAGCCCCGGCCGGCCCCATCTGCTGACAGGCAGCTCTGAT +
Preference number: 5 (lower is better)
Translates to: PPTASPAPLSHSRWP*HSPGRPHLLTGSSD
Trigger: ATCAGAGCTGCCTGTCAGCAGATGGGGCCGGCCGGGGCTGTGGCAGGGCCACCTGGAGTGTGAGAGAGGAGCAGGTGAAGCAGTGGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354625.6
ENST00000553646.1
ENST00000555009.5
ENST00000555647.5
ENST00000555834.5
ENST00000557413.6
CDS CCA 90 bp GCTCCAGGCCGGGGCTGGGCAGGCACTCACAGGCCACCAGGCTCATaGCTGCCCTGCAGCTGGGACCCTTTGGGGTTTAGCACTTCTCCG +
Preference number: 5 (lower is better)
Translates to: APGRGWAGTHRPPGS*LPCSWDPLGFSTSP
Trigger: CGGAGAAGTGCTAAACCCCAAAGGGTCCCAGCTGCAGGGCAGCCATGAGCCTGGTGGCCTGTGAGTGCCTGCCCAGCCCCGGCCTGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555647.5
CDS TCA 90 bp GCTCGAACTGCAGCAGCTCAGTCAGCAGAGAGGCCGCTGGGCGACTaGGCCACTCGGGCAGCTGGAGCTGGGTGTGGGCCTGGATTCCTG +
Preference number: 5 (lower is better)
Translates to: ARTAAAQSAERPLGD*ATRAAGAGCGPGFL
Trigger: CAGGAATCCAGGCCCACACCCAGCTCCAGCTGCCCGAGTGGCTCAGTCGCCCAGCGGCCTCTCTGCTGACTGAGCTGCTGCAGTTCGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553789.5
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS GCA 90 bp GCAGGTGGCCACCTGGGGCCTTTGGAAGGTCCGAGGAGCCAGAGGTaGTGGTCCTGGCTGTGGGTTCACCTTCAGCCTCCCTCTGGGGTC +
Preference number: 5 (lower is better)
Translates to: AGGHLGPLEGPRSQR*WSWLWVHLQPPSGV
Trigger: GACCCCAGAGGGAGGCTGAAGGTGAACCCACAGCCAGGACCAGCACCTCTGGCTCCTCGGACCTTCCAAAGGCCCCAGGTGGCCACCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354625.6
ENST00000553646.1
ENST00000555009.5
ENST00000555647.5
ENST00000555834.5
ENST00000557413.6
CDS GCA 90 bp CAGCACCCCCTGCTCGTGCAGCGCCTCCAGCGCTACCAGCATCTCTaGCGCCCACTGCTTCACCTGCTCCTCTCTCACACTCCAGGTGGC +
Preference number: 5 (lower is better)
Translates to: QHPLLVQRLQRYQHL*RPLLHLLLSHTPGG
Trigger: GCCACCTGGAGTGTGAGAGAGGAGCAGGTGAAGCAGTGGGCGGCAGAGATGCTGGTAGCGCTGGAGGCGCTGCACGAGCAGGGGGTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354625.6
ENST00000553646.1
ENST00000555009.5
ENST00000555647.5
ENST00000555834.5
ENST00000557413.6
CDS GCA 90 bp CAGGGGCAGGGTGGCACCTGCCTTCACCACAAAGGTCCCTCCGGTTaGCGGGTCCTGGACCAGCTGCACCTTCTCGATGACCCCGACCAC +
Preference number: 5 (lower is better)
Translates to: QGQGGTCLHHKGPSG*RVLDQLHLLDDPDH
Trigger: GTGGTCGGGGTCATCGAGAAGGTGCAGCTGGTCCAGGACCCGGCAACCGGAGGGACCTTTGTGGTGAAGGCAGGTGCCACCCTGCCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554834.1
CDS GCA 90 bp CGGGGCTGGGCAGGCACTCACAGGCCACCAGGCTCATGGCTGCCCTaGAGCTGGGACCCTTTGGGGTTTAGCACTTCTCCGTGGACCGGA +
Preference number: 5 (lower is better)
Translates to: RGWAGTHRPPGSWLP*SWDPLGFSTSPWTG
Trigger: TCCGGTCCACGGAGAAGTGCTAAACCCCAAAGGGTCCCAGCTGCAGGGCAGCCATGAGCCTGGTGGCCTGTGAGTGCCTGCCCAGCCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555647.5
CDS CCA 90 bp GAAGTCCTAGGAGGCTCCAGGGCGATTCTGTCCTGGCCAGGGGCATaGCCTGAGGGAAGCCTCGCTGGGGTCAGGAGGTTGAGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: EVLGGSRAILSWPGA*PEGSLAGVRRLRWG
Trigger: CCCCCACCTCAACCTCCTGACCCCAGCGAGGCTTCCCTCAGGCCATGCCCCTGGCCAGGACAGAATCGCCCTGGAGCCTCCTAGGACTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354625.6
ENST00000553646.1
ENST00000555009.5
ENST00000555647.5
ENST00000555834.5
ENST00000557413.6
CDS CCA 90 bp GCTCCAGGCCGGGGCTGGGCAGGCACTCACAGGCCACCAGGCTCATaGCTGCCCTGCAGCTGGGACCTGGAATGGGCAAATGCATTAGGG +
Preference number: 5 (lower is better)
Translates to: APGRGWAGTHRPPGS*LPCSWDLEWANALG
Trigger: CCCTAATGCATTTGCCCATTCCAGGTCCCAGCTGCAGGGCAGCCATGAGCCTGGTGGCCTGTGAGTGCCTGCCCAGCCCCGGCCTGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557383.1
CDS CCA 90 bp CCAGAGCTGAGCCCAGAATGTCGGGAGTGCGCCTGGGAGAGCAGGTaGGACCAGAGAGTGCCTCCTGGGCCATGCAGAGGGAGCGGTGAG +
Preference number: 5 (lower is better)
Translates to: PELSPECRECAWESR*DQRVPPGPCRGSGE
Trigger: CTCACCGCTCCCTCTGCATGGCCCAGGAGGCACTCTCTGGTCCCACCTGCTCTCCCAGGCGCACTCCCGACATTCTGGGCTCAGCTCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553646.1
CDS-3UTR CAA 90 bp TGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGCCCAGCAGGGCCACCTGGGGCCTTaGGAAGGTCCGAGGAGCCAG +
Preference number: 5 (lower is better)
Translates to: WPFLGGGHNSEAPVGAQQGHLGP*EGPRSQ
Trigger: CTGGCTCCTCGGACCTTCCAAAGGCCCCAGGTGGCC...CTGCTGGGCTCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp CCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTGGAGGCAATGGCCACCTGGGGCCTTaGGAAGGTCCGAGGAGCCAG +
Preference number: 5 (lower is better)
Translates to: PRPGDRVNPERSPQTGGNGHLGP*EGPRSQ
Trigger: CTGGCTCCTCGGACCTTCCAAAGGCCCCAGGTGGCC...ATTGCCTCCAGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS TCA 90 bp GAAACTCGGCAGGGGCACAGCACCCTCCACAGAGGCACAGCACTCTaGGGCCCACAGAGCCCACAGGGTACTCCCAGGAGCCTCGGCCAA +
Preference number: 5 (lower is better)
Translates to: ETRQGHSTLHRGTAL*GPQSPQGTPRSLGQ
Trigger: TTGGCCGAGGCTCCTGGGAGTACCCTGTGGGCTCTGTGGGCCTCAGAGTGCTGTGCCTCTGTGGAGGGTGCTGTGCCCCTGCCGAGTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553646.1
ENST00000555834.5
CDS TCA 90 bp GAGAGGCCCAGTCAGCTGGGCCACTCCAGCTGTGGAGGCATGGGGTaGCCTCCAGGGACTCCAACCACTATGGCCTCTAGGGGGCCTGCT +
Preference number: 5 (lower is better)
Translates to: ERPSQLGHSSCGGMG*PPGTPTTMASRGPA
Trigger: AGCAGGCCCCCTAGAGGCCATAGTGGTTGGAGTCCCTGGAGGTCACCCCATGCCTCCACAGCTGGAGTGGCCCAGCTGACTGGGCCTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553646.1
ENST00000555834.5
ENST00000556848.5
CDS GCA 90 bp CTGCTGAAACCCGCGCTGGGGCTGGCTCCACTGCTCAGCGGCCGCTaGAGGTGGCAGTTGAAGATCTCCTCTGCCCGCCGCAGGTATTTG +
Preference number: 5 (lower is better)
Translates to: LLKPALGLAPLLSGR*RWQLKISSARRRYL
Trigger: CAAATACCTGCGGCGGGCAGAGGAGATCTTCAACTGCCACCTGCAGCGGCCGCTGAGCAGTGGAGCCAGCCCCAGCGCGGGTTTCAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354625.6
ENST00000553894.6
ENST00000554900.1
ENST00000555647.5
ENST00000555834.5
ENST00000557413.6
CDS GCA 90 bp TGCTCGTGCAGCGCCTCCAGCGCTACCAGCATCTCTGCCGCCCACTaGTTCACCTGCTCCTCTCTCACACTCCAGGTGGCCCTGCCACAG +
Preference number: 5 (lower is better)
Translates to: CSCSASSATSISAAH*FTCSSLTLQVALPQ
Trigger: CTGTGGCAGGGCCACCTGGAGTGTGAGAGAGGAGCAGGTGAAGCAGTGGGCGGCAGAGATGCTGGTAGCGCTGGAGGCGCTGCACGAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354625.6
ENST00000553646.1
ENST00000555009.5
ENST00000555647.5
ENST00000555834.5
ENST00000557413.6
CDS CCA 90 bp GCAGAGAGAGGCCCAGTCAGCTGGGCCACTCCAGCTGTGGAGGCATaGGGTGACCTCCAGGGACTCCAACCACTATGGCCTCTAGGGGGC +
Preference number: 5 (lower is better)
Translates to: AERGPVSWATPAVEA*GDLQGLQPLWPLGG
Trigger: GCCCCCTAGAGGCCATAGTGGTTGGAGTCCCTGGAGGTCACCCCATGCCTCCACAGCTGGAGTGGCCCAGCTGACTGGGCCTCTCTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553646.1
ENST00000555834.5
ENST00000556848.5
CDS-3UTR CAA 90 bp CCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGCAAAGGTCCCTCCGGTaGCCGGGTCCTGGACCAGCT +
Preference number: 5 (lower is better)
Translates to: PFLAQSPLIEGQPWVGCQQRSLR*PGPGPA
Trigger: AGCTGGTCCAGGACCCGGCAACCGGAGGGACCTTTG...CTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp TCCAGGAGCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGGCCACCTGGGGCCTTaGGAAGGTCCGAGGAGCCAG +
Preference number: 5 (lower is better)
Translates to: SRSWPFLGGGHNSEAPVGGHLGP*EGPRSQ
Trigger: CTGGCTCCTCGGACCTTCCAAAGGCCCCAGGTGGCC...TCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGCTCCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp CCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTGGAGGCAATGCCAGCCCTCCTAGCTaGAAGGTGCAGGTGGCCACC +
Preference number: 5 (lower is better)
Translates to: PRPGDRVNPERSPQTGGNASPPS*KVQVAT
Trigger: GGTGGCCACCTGCACCTTCAAGCTAGGAGGGCTGGC...ATTGCCTCCAGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp TTTCCCAGGTCGGTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCCAGGACAGTCTGGTTaGGGTCCACTGAGCCAGTGG +
Preference number: 5 (lower is better)
Translates to: FPRSVPRPGDRVNPERSPPGQSG*GPLSQW
Trigger: CCACTGGCTCAGTGGACCCAAACCAGACTGTCCTGG...GGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGACCGACCTGGGAAA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS GCA 90 bp ATCCTCTCCTGGGTAGAGCCAGAGCTGAGCCCAGAATGTCGGGAGTaGGCCTGGGAGAGCAGGTGGGACCAGAGAGTGCCTCCTGGGCCA +
Preference number: 5 (lower is better)
Translates to: ILSWVEPELSPECRE*AWESRWDQRVPPGP
Trigger: TGGCCCAGGAGGCACTCTCTGGTCCCACCTGCTCTCCCAGGCGCACTCCCGACATTCTGGGCTCAGCTCTGGCTCTACCCAGGAGAGGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553646.1
CDS CCA 90 bp AGAAGGTTCGGAGAAGTCCTAGGAGGCTCCAGGGCGATTCTGTCCTaGCCAGGGGCATGGCCTGAGGGAAGCCTCGCTGGGGTCAGGAGG +
Preference number: 5 (lower is better)
Translates to: RRFGEVLGGSRAILS*PGAWPEGSLAGVRR
Trigger: CCTCCTGACCCCAGCGAGGCTTCCCTCAGGCCATGCCCCTGGCCAGGACAGAATCGCCCTGGAGCCTCCTAGGACTTCTCCGAACCTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354625.6
ENST00000553646.1
ENST00000555009.5
ENST00000555647.5
ENST00000555834.5
ENST00000557413.6
CDS CCA 90 bp TCCTGGGTAGAGCCAGAGCTGAGCCCAGAATGTCGGGAGTGCGCCTaGGAGAGCAGGTGGGACCAGAGAGTGCCTCCTGGGCCATGCAGA +
Preference number: 5 (lower is better)
Translates to: SWVEPELSPECRECA*ESRWDQRVPPGPCR
Trigger: TCTGCATGGCCCAGGAGGCACTCTCTGGTCCCACCTGCTCTCCCAGGCGCACTCCCGACATTCTGGGCTCAGCTCTGGCTCTACCCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553646.1
CDS-3UTR CAA 90 bp CCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTGGAGGCAATCGCTGCAGGTGGCAGTaGAAGATCTCCTCTGCCCGC +
Preference number: 5 (lower is better)
Translates to: PRPGDRVNPERSPQTGGNRCRWQ*KISSAR
Trigger: GCGGGCAGAGGAGATCTTCAACTGCCACCTGCAGCG...ATTGCCTCCAGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp TCTGACAGTTGGGCCTTCAGAGCCAGGCACGTGGACCGTGTCAGAAGCGCCACCCAAAGGTCCCTCCGGTaGCCGGGTCCTGGACCAGCT +
Preference number: 5 (lower is better)
Translates to: SDSWAFRARHVDRVRSATQRSLR*PGPGPA
Trigger: AGCTGGTCCAGGACCCGGCAACCGGAGGGACCTTTG...GGTGGCGCTTCTGACACGGTCCACGTGCCTGGCTCTGAAGGCCCAACTGTCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp TTTCCCAGGTCGGTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCGGCCTGGAAGCTGAATaGCTGTCCTCTTGCACCCCT +
Preference number: 5 (lower is better)
Translates to: FPRSVPRPGDRVNPERSPGLEAE*LSSCTP
Trigger: AGGGGTGCAAGAGGACAGCAATTCAGCTTCCAGGCC...GGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGACCGACCTGGGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS GCA 90 bp TTGCAGGGCTTCCCCCAACAGTCATGCGGTAGGAGCCAATGGCCTTaGTGGGCAGAAACTCGGCAGGGGCACAGCACCCTCCACAGAGGC +
Preference number: 5 (lower is better)
Translates to: LQGFPQQSCGRSQWP*WAETRQGHSTLHRG
Trigger: GCCTCTGTGGAGGGTGCTGTGCCCCTGCCGAGTTTCTGCCCAGCAAGGCCATTGGCTCCTACCGCATGACTGTTGGGGGAAGCCCTGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553646.1
ENST00000555834.5
CDS CCA 90 bp TCCTGGGTAGAGCCAGAGCTGAGCCCAGAATGTCGGGAGTGCGCCTaGGAGAGCAGGTGGGACCAGAGAGTGCCTCCTTGCACATGCTCC +
Preference number: 5 (lower is better)
Translates to: SWVEPELSPECRECA*ESRWDQRVPPCTCS
Trigger: GGAGCATGTGCAAGGAGGCACTCTCTGGTCCCACCTGCTCTCCCAGGCGCACTCCCGACATTCTGGGCTCAGCTCTGGCTCTACCCAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354625.6
ENST00000554834.1
ENST00000555009.5
ENST00000555647.5
ENST00000555834.5
ENST00000557413.6
CDS CCA 90 bp CAGGGCTTCCCCCAACAGTCATGCGGTAGGAGCCAATGGCCTTGCTaGGCAGAAACTCGGCAGGGGCACAGCACCCTCCACAGAGGCACA +
Preference number: 5 (lower is better)
Translates to: QGFPQQSCGRSQWPC*AETRQGHSTLHRGT
Trigger: TGTGCCTCTGTGGAGGGTGCTGTGCCCCTGCCGAGTTTCTGCCCAGCAAGGCCATTGGCTCCTACCGCATGACTGTTGGGGGAAGCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553646.1
ENST00000555834.5
CDS CCA 90 bp TGCACCGCGCTGGGGCTGGCTCCACTGCTCAGCGGCCGCTGCAGGTaGCAGTTGAAGATCTCCTCTGCCCGCCGCAGGTATTTGGTAATT +
Preference number: 5 (lower is better)
Translates to: CTALGLAPLLSGRCR*QLKISSARRRYLVI
Trigger: AATTACCAAATACCTGCGGCGGGCAGAGGAGATCTTCAACTGCCACCTGCAGCGGCCGCTGAGCAGTGGAGCCAGCCCCAGCGCGGTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555009.5
CDS CCA 90 bp GCCCTGAGAAAGATCCAAGGGGAATGCAGAGTGGCAGGGGCAGGGTaGCACCTGCCTTCACCACAAAGGTCCCTCCGGTTGCCGGGTCCT +
Preference number: 5 (lower is better)
Translates to: ALRKIQGECRVAGAG*HLPSPQRSLRLPGP
Trigger: AGGACCCGGCAACCGGAGGGACCTTTGTGGTGAAGGCAGGTGCCACCCTGCCCCTGCCACTCTGCATTCCCCTTGGATCTTTCTCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554834.1
CDS-3UTR CAA 90 bp AGGAGCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGCCCCCAGAGCCACCCTGTaGCGAATCTGCTCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: RSWPFLGGGHNSEAPVGAPRATL*RICSRY
Trigger: GTACCTGGAGCAGATTCGCAACAGGGTGGCTCTGGG...GGCTCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp TGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGCCCAGCAGCCCAGAGCCACCCTGTaGCGAATCTGCTCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: WPFLGGGHNSEAPVGAQQPRATL*RICSRY
Trigger: GTACCTGGAGCAGATTCGCAACAGGGTGGCTCTGGG...CTGCTGGGCTCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp CCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCCAGAGAGTGCCTCCTaGCACATGCTCCAGGTGCAG +
Preference number: 5 (lower is better)
Translates to: PPFLAQSPLIEGQPWVGCPESAS*HMLQVQ
Trigger: CTGCACCTGGAGCATGTGCAAGGAGGCACTCTCTGG...ACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp CAGAGCAGGCTTTATTGGGGCCGTGTAAACCCCAGGGAGAGGCAGGACGTGGACGCCAGCCCTCCTAGCTaGAAGGTGCAGGTGGCCACC +
Preference number: 5 (lower is better)
Translates to: QSRLYWGRVNPRERQDVDASPPS*KVQVAT
Trigger: GGTGGCCACCTGCACCTTCAAGCTAGGAGGGCTGGC...GTCCACGTCCTGCCTCTCCCTGGGGTTTACACGGCCCCAATAAAGCCTGCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp CCCAGTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCCCAGAGCAGGCTTTATaGGGGCCGTGTAAACCCCAG +
Preference number: 5 (lower is better)
Translates to: PSGSPAGQTVPSIPRPKPPEQAL*GPCKPQ
Trigger: CTGGGGTTTACACGGCCCCAATAAAGCCTGCTCTGG...GGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCACTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp CAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGAGCCGGATGTGACCTaGCACATGCTCCAGGTGCAG +
Preference number: 5 (lower is better)
Translates to: QTVPSIPRPKPADRGPALEPDVT*HMLQVQ
Trigger: CTGCACCTGGAGCATGTGCAAGGTCACATCCGGCTC...CAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553789.5
ENST00000553971.5
CDS-3UTR CAA 90 bp CCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGAGCCGGATGTGACCTaGCACATGCTCCAGGTGCAG +
Preference number: 5 (lower is better)
Translates to: PFLAQSPLIEGQPWVGCQEPDVT*HMLQVQ
Trigger: CTGCACCTGGAGCATGTGCAAGGTCACATCCGGCTC...CTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553789.5
ENST00000553971.5
CDS GCA 90 bp ATCCTCTCCTGGGTAGAGCCAGAGCTGAGCCCAGAATGTCGGGAGTaGGCCTGGGAGAGCAGGTGGGACCAGAGAGTGCCTCCTTGCACA +
Preference number: 5 (lower is better)
Translates to: ILSWVEPELSPECRE*AWESRWDQRVPPCT
Trigger: TGTGCAAGGAGGCACTCTCTGGTCCCACCTGCTCTCCCAGGCGCACTCCCGACATTCTGGGCTCAGCTCTGGCTCTACCCAGGAGAGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354625.6
ENST00000554834.1
ENST00000555009.5
ENST00000555647.5
ENST00000555834.5
ENST00000557413.6
CDS CCA 90 bp AAACCCGCGCTGGGGCTGGCTCCACTGCTCAGCGGCCGCTGCAGGTaGCAGTTGAAGATCTCCTCTGCCCGCCGCAGGTATTTGGTAATT +
Preference number: 5 (lower is better)
Translates to: KPALGLAPLLSGRCR*QLKISSARRRYLVI
Trigger: AATTACCAAATACCTGCGGCGGGCAGAGGAGATCTTCAACTGCCACCTGCAGCGGCCGCTGAGCAGTGGAGCCAGCCCCAGCGCGGGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354625.6
ENST00000553894.6
ENST00000554900.1
ENST00000555647.5
ENST00000555834.5
ENST00000557413.6
CDS-3UTR CAA 90 bp CAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGCCTCACGTCGCTCCTaGTTGGGGTCAACGTGTATG +
Preference number: 5 (lower is better)
Translates to: QTVPSIPRPKPADRGPALASRRS*LGSTCM
Trigger: CATACACGTTGACCCCAACAAGGAGCGACGTGAGGC...CAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp GGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCACGCCCCGGTGACAGGGCGCTGCAGGTGGCAGTaGAAGATCTCCTCTGCCCGC +
Preference number: 5 (lower is better)
Translates to: GQNSSGNFPGRSHAPVTGRCRWQ*KISSAR
Trigger: GCGGGCAGAGGAGATCTTCAACTGCCACCTGCAGCG...CCCTGTCACCGGGGCGTGGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp TGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGCCCAGCAGGGCCTGGAAGCTGAATaGCTGTCCTCTTGCACCCCT +
Preference number: 5 (lower is better)
Translates to: WPFLGGGHNSEAPVGAQQGLEAE*LSSCTP
Trigger: AGGGGTGCAAGAGGACAGCAATTCAGCTTCCAGGCC...CTGCTGGGCTCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp CCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTGCCCCAAGCTCGCTCTaGACTTCACTCTGGAGCTTC +
Preference number: 5 (lower is better)
Translates to: PPFLAQSPLIEGQPWVGCAPSSL*TSLWSF
Trigger: GAAGCTCCAGAGTGAAGTCAAGAGCGAGCTTGGGGC...ACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CAA 90 bp AGGAGCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGCCAGGAGCTACCGTCTGTaGCAAGGGGTCACTGTGAGG +
Preference number: 5 (lower is better)
Translates to: RSWPFLGGGHNSEAPVGARSYRL*QGVTVR
Trigger: CCTCACAGTGACCCCTTGCAACAGACGGTAGCTCCT...GGCTCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CAA 90 bp TCCCCTGAGGCCCACATGGCATGCTGCTCACCACCAGCCCTGCGTCCTACTTCCTCACGTCGCTCCTTGTaGGGGTCAACGTGTATGCCA +
Preference number: 5 (lower is better)
Translates to: SPEAHMACCSPPALRPTSSRRSL*GSTCMP
Trigger: TGGCATACACGTTGACCCCAACAAGGAGCGACGTGA...GGAAGTAGGACGCAGGGCTGGTGGTGAGCAGCATGCCATGTGGGCCTCAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CAA 90 bp CCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTGGAGGCAATTCACGTCGCTCCTTGTaGGGGTCAACGTGTATGCCA +
Preference number: 5 (lower is better)
Translates to: PRPGDRVNPERSPQTGGNSRRSL*GSTCMP
Trigger: TGGCATACACGTTGACCCCAACAAGGAGCGACGTGA...ATTGCCTCCAGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp GTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTGGAGGCGCCCGCCGCAGGTATTaGGTAATTTTCAGCTTCACA +
Preference number: 5 (lower is better)
Translates to: VPRPGDRVNPERSPQTGGARRRY*VIFSFT
Trigger: TGTGAAGCTGAAAATTACCAAATACCTGCGGCGGGC...GCCTCCAGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp CCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGTCTTACCCCACCAGCTaGCTCCATTGGATGGTACTG +
Preference number: 5 (lower is better)
Translates to: PRPKPADRGPALGWVSGKSYPTS*LHWMVL
Trigger: CAGTACCATCCAATGGAGCAAGCTGGTGGGGTAAGA...CTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553789.5
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp CCAGTGGGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGTCTTACCCCACCAGCTaGCTCCATTGGATGGTACTG +
Preference number: 5 (lower is better)
Translates to: PVGAQQDRQCPPFLAQSPSYPTS*LHWMVL
Trigger: CAGTACCATCCAATGGAGCAAGCTGGTGGGGTAAGA...CGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCCCACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp GTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTGGAGGCAGGCTGCGCTTTCACTaGTCTTCTCTGTCTCAGTCT +
Preference number: 5 (lower is better)
Translates to: VPRPGDRVNPERSPQTGGRLRFH*SSLSQS
Trigger: AGACTGAGACAGAGAAGACAAGTGAAAGCGCAGCCT...GCCTCCAGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CAA 90 bp TCTGACAGTTGGGCCTTCAGAGCCAGGCACGTGGACCGTGTCAGAAGCGCCACCCCAGAGCAGGCTTTATaGGGGCCGTGTAAACCCCAG +
Preference number: 5 (lower is better)
Translates to: SDSWAFRARHVDRVRSATPEQAL*GPCKPQ
Trigger: CTGGGGTTTACACGGCCCCAATAAAGCCTGCTCTGG...GGTGGCGCTTCTGACACGGTCCACGTGCCTGGCTCTGAAGGCCCAACTGTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CAA 90 bp GTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTGGAGGCAATGAGCCGTGGTCATaGCATGGAAGAAGCGAGAAC +
Preference number: 5 (lower is better)
Translates to: VPRPGDRVNPERSPQTGGNEPWS*HGRSEN
Trigger: GTTCTCGCTTCTTCCATGCAATGACCACGGCTCATT...GCCTCCAGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CAA 90 bp CCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGAGGAGCTACCGTCTGTaGCAAGGGGTCACTGTGAGG +
Preference number: 5 (lower is better)
Translates to: PAGQTVPSIPRPKPADRGRSYRL*QGVTVR
Trigger: CCTCACAGTGACCCCTTGCAACAGACGGTAGCTCCT...CCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS GCA 90 bp ACCAGGCTCATGGCTGCCCTGCAGCTGGGACCTGGAATGGGCAAATaGATTAGGGAGGACCTAGCTGGTAGCAACACCCCTATCCGCACC +
Preference number: 5 (lower is better)
Translates to: TRLMAALQLGPGMGK*IREDLAGSNTPIRT
Trigger: GGTGCGGATAGGGGTGTTGCTACCAGCTAGGTCCTCCCTAATGCATTTGCCCATTCCAGGTCCCAGCTGCAGGGCAGCCATGAGCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557383.1
CDS GCA 90 bp TGGAGCAACTGCCTCCCTCAGTTCCTGACCTGTCCTTACCCCCACTaGCCCTGTAGAATCTGGGTCCTCCACCCTCTAGCCAAAGAGGGG +
Preference number: 5 (lower is better)
Translates to: WSNCLPQFLTCPYPH*PCRIWVLHPLAKEG
Trigger: CCCCTCTTTGGCTAGAGGGTGGAGGACCCAGATTCTACAGGGGCAGTGGGGGTAAGGACAGGTCAGGAACTGAGGGAGGCAGTTGCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554834.1
CDS CCA 90 bp GCTCACAAAGTACCTGAGCAGCTTCGTCATGTAGGGGACTCCGTGTaGGATGATGGTCAGCCGCTCCCTGCTCACCATGTGGCACCTGGG +
Preference number: 5 (lower is better)
Translates to: AHKVPEQLRHVGDSV*DDGQPLPAHHVAPG
Trigger: CCCAGGTGCCACATGGTGAGCAGGGAGCGGCTGACCATCATCCCACACGGAGTCCCCTACATGACGAAGCTGCTCAGGTACTTTGTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354625.6
ENST00000553894.6
ENST00000554834.1
ENST00000555009.5
ENST00000555647.5
ENST00000555834.5
ENST00000557413.6
CDS-3UTR CAA 90 bp GGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCACGCCCCCCAGAGCCACCCTGTaGCGAATCTGCTCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: GGAEGKTLVEISQVGPTPPRATL*RICSRY
Trigger: GTACCTGGAGCAGATTCGCAACAGGGTGGCTCTGGG...GGGCGTGGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp GCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGCCCAGCCCAGATAGTCACGTTTaGTCATGTCAGGCACTCCCA +
Preference number: 5 (lower is better)
Translates to: AGPSWVVAIILRPQWEPSPDSHV*SCQALP
Trigger: TGGGAGTGCCTGACATGACAAAACGTGACTATCTGG...GCTGGGCTCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp GAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTCCTGCCAGCCCTCCTAGCTaGAAGGTGCAGGTGGCCACC +
Preference number: 5 (lower is better)
Translates to: EVTVGSDMVNSQGLRGSPASPPS*KVQVAT
Trigger: GGTGGCCACCTGCACCTTCAAGCTAGGAGGGCTGGC...AGGACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp GTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTGGAGGCAAAAAGGGATGGGACTaGAGTTTGCTGACACCACCT +
Preference number: 5 (lower is better)
Translates to: VPRPGDRVNPERSPQTGGKKGWD*SLLTPP
Trigger: AGGTGGTGTCAGCAAACTCAAGTCCCATCCCTTTTT...GCCTCCAGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CAA 90 bp CCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTTCTTACCCCACCAGCTaGCTCCATTGGATGGTACTG +
Preference number: 5 (lower is better)
Translates to: PPFLAQSPLIEGQPWVGCSYPTS*LHWMVL
Trigger: CAGTACCATCCAATGGAGCAAGCTGGTGGGGTAAGA...ACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553789.5
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp CTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGGGCTTAAACACAGCCTaGTCTTTTCCAGAGTCCCTG +
Preference number: 5 (lower is better)
Translates to: LAQSPLIEGQPWVGCQARGLNTA*SFPESL
Trigger: CAGGGACTCTGGAAAAGACAAGGCTGTGTTTAAGCC...CCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CAA 90 bp GCTGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGCCCAGCATTTCAGTGATGGATTaGGGAGGAGTGGGGGCATCT +
Preference number: 5 (lower is better)
Translates to: AGPSWVVAIILRPQWEPSISVMD*GGVGAS
Trigger: AGATGCCCCCACTCCTCCCAAATCCATCACTGAAAT...GCTGGGCTCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS CCA 90 bp TACTGCCCTCTGCACCCACATCAGACACTGAGCACGAAGCACACGTaGTTCAGACACAGTTCTGTGCCCCTCCCAGCACCTTCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: YCPLHPHQTLSTKHT*FRHSSVPLPAPSSG
Trigger: GCCTGAGGAAGGTGCTGGGAGGGGCACAGAACTGTGTCTGAACCACGTGTGCTTCGTGCTCAGTGTCTGATGTGGGTGCAGAGGGCAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553646.1
ENST00000555834.5
ENST00000556848.5
CDS-3UTR CAA 90 bp GGAGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGCCCAGAGCCACCCTGTaGCGAATCTGCTCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: GEAGRGPQRVMYRLRFHLPRATL*RICSRY
Trigger: GTACCTGGAGCAGATTCGCAACAGGGTGGCTCTGGG...CAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp GGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCACGCCCGCCTCACGTCGCTCCTaGTTGGGGTCAACGTGTATG +
Preference number: 5 (lower is better)
Translates to: GGAEGKTLVEISQVGPTPASRRS*LGSTCM
Trigger: CATACACGTTGACCCCAACAAGGAGCGACGTGAGGC...GGGCGTGGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp AACAGCTTCTGGTGGAAGAGGCCTACTCGCTGTGTGACTAAGAGGACTAGCCAGGCCAGCCCTCCTAGCTaGAAGGTGCAGGTGGCCACC +
Preference number: 5 (lower is better)
Translates to: NSFWWKRPTRCVTKRTSQASPPS*KVQVAT
Trigger: GGTGGCCACCTGCACCTTCAAGCTAGGAGGGCTGGC...CTGGCTAGTCCTCTTAGTCACACAGCGAGTAGGCCTCTTCCACCAGAAGCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp GCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAGGCAAGGAGGAAAAAGGGATGGGACTaGAGTTTGCTGACACCACCT +
Preference number: 5 (lower is better)
Translates to: AQSPLIEGQPWVGCQARRKKGWD*SLLTPP
Trigger: AGGTGGTGTCAGCAAACTCAAGTCCCATCCCTTTTT...CCTCCTTGCCTGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553789.5
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp TGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGAAAAAGGGATGGGACTaGAGTTTGCTGACACCACCT +
Preference number: 5 (lower is better)
Translates to: CPPFLAQSPLIEGQPWVGKKGWD*SLLTPP
Trigger: AGGTGGTGTCAGCAAACTCAAGTCCCATCCCTTTTT...CCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553789.5
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp CCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGTCTTACCCCACCAGCTaGCTCCATTGGATGGTACTG +
Preference number: 5 (lower is better)
Translates to: PAGQTVPSIPRPKPADRGSYPTS*LHWMVL
Trigger: CAGTACCATCCAATGGAGCAAGCTGGTGGGGTAAGA...CCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp CTCCCCACCATGAGTGAGGGGTCTGGTCTGACAGTTGGGCCTTCAGAGCCAGGCTCTTACCCCACCAGCTaGCTCCATTGGATGGTACTG +
Preference number: 5 (lower is better)
Translates to: LPTMSEGSGLTVGPSEPGSYPTS*LHWMVL
Trigger: CAGTACCATCCAATGGAGCAAGCTGGTGGGGTAAGA...GCCTGGCTCTGAAGGCCCAACTGTCAGACCAGACCCCTCACTCATGGTGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp CCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTAGGCTGCGCTTTCACTaGTCTTCTCTGTCTCAGTCT +
Preference number: 5 (lower is better)
Translates to: PPFLAQSPLIEGQPWVGCRLRFH*SSLSQS
Trigger: AGACTGAGACAGAGAAGACAAGTGAAAGCGCAGCCT...ACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp GGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCACGCCCCCAGAGCAGGCTTTATaGGGGCCGTGTAAACCCCAG +
Preference number: 5 (lower is better)
Translates to: GGAEGKTLVEISQVGPTPPEQAL*GPCKPQ
Trigger: CTGGGGTTTACACGGCCCCAATAAAGCCTGCTCTGG...GGGCGTGGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CAA 90 bp AGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGAAGATGTACAGTGGTTaGGTCTGGAGAGGCAGGACA +
Preference number: 5 (lower is better)
Translates to: RQCPPFLAQSPLIEGQPWKMYSG*VWRGRT
Trigger: TGTCCTGCCTCTCCAGACCAAACCACTGTACATCTT...CCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CAA 90 bp TGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGCCCAGCAGAAGATGTACAGTGGTTaGGTCTGGAGAGGCAGGACA +
Preference number: 5 (lower is better)
Translates to: WPFLGGGHNSEAPVGAQQKMYSG*VWRGRT
Trigger: TGTCCTGCCTCTCCAGACCAAACCACTGTACATCTT...CTGCTGGGCTCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS CCA 90 bp TCTGTGATCCACAGCCACCTTCACAGGGCCTCCGTAGAGCAAGCTTaGTATCCAGTACGCATTCAGCACATGGAGGCCACACACGCTGGG +
Preference number: 5 (lower is better)
Translates to: SVIHSHLHRASVEQA*YPVRIQHMEATHAG
Trigger: CCCAGCGTGTGTGGCCTCCATGTGCTGAATGCGTACTGGATACCAAGCTTGCTCTACGGAGGCCCTGTGAAGGTGGCTGTGGATCACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000553894.6
ENST00000556776.1
ENST00000557413.6
CDS-3UTR CAA 90 bp CCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCTCCGTAGAGCAAGCTaGGTATCCAGTACGCATTCA +
Preference number: 5 (lower is better)
Translates to: PAGQTVPSIPRPKPADRGLRRAS*VSSTHS
Trigger: TGAATGCGTACTGGATACCAAGCTTGCTCTACGGAG...CCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CAA 90 bp GGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCACGCCCTCACGTCGCTCCTTGTaGGGGTCAACGTGTATGCCA +
Preference number: 5 (lower is better)
Translates to: GGAEGKTLVEISQVGPTPSRRSL*GSTCMP
Trigger: TGGCATACACGTTGACCCCAACAAGGAGCGACGTGA...GGGCGTGGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp GTGGGGCACAACATGGCAGTGAGTGAGTCACAGAACCTCACAGTAGGGTGCAGCGCCTCACGTCGCTCCTaGTTGGGGTCAACGTGTATG +
Preference number: 5 (lower is better)
Translates to: VGHNMAVSESQNLTVGCSASRRS*LGSTCM
Trigger: CATACACGTTGACCCCAACAAGGAGCGACGTGAGGC...GCTGCACCCTACTGTGAGGTTCTGTGACTCACTCACTGCCATGTTGTGCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp CCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGGCCCGCCGCAGGTATTaGGTAATTTTCAGCTTCACA +
Preference number: 5 (lower is better)
Translates to: PAGQTVPSIPRPKPADRGARRRY*VIFSFT
Trigger: TGTGAAGCTGAAAATTACCAAATACCTGCGGCGGGC...CCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp CCAAAAGGGCATGAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGCGCTGCAGGTGGCAGTaGAAGATCTCCTCTGCCCGC +
Preference number: 5 (lower is better)
Translates to: PKGHEVTVGSDMVNSQGLRCRWQ*KISSAR
Trigger: GCGGGCAGAGGAGATCTTCAACTGCCACCTGCAGCG...CAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTCATGCCCTTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp CGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTCAAAGGTCCCTCCGGTaGCCGGGTCCTGGACCAGCT +
Preference number: 5 (lower is better)
Translates to: RGPQRVMYRLRFHLSSLSQRSLR*PGPGPA
Trigger: AGCTGGTCCAGGACCCGGCAACCGGAGGGACCTTTG...AGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp TGGCCCTTCCTGGGTGGTGGCCATAATTCTGAGGCCCCAGTGGGAGCCCAGCAGAAAAAGGGATGGGACTaGAGTTTGCTGACACCACCT +
Preference number: 5 (lower is better)
Translates to: WPFLGGGHNSEAPVGAQQKKGWD*SLLTPP
Trigger: AGGTGGTGTCAGCAAACTCAAGTCCCATCCCTTTTT...CTGCTGGGCTCCCACTGGGGCCTCAGAATTATGGCCACCACCCAGGAAGGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp AGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCCCAGGACAGTCTGGTTaGGGTCCACTGAGCCAGTGG +
Preference number: 5 (lower is better)
Translates to: RGRTWTTESHVQAALSLVPGQSG*GPLSQW
Trigger: CCACTGGCTCAGTGGACCCAAACCAGACTGTCCTGG...GACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CAA 90 bp GTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTCCTGATCCAGGACAGTCTGGTTaGGGTCCACTGAGCCAGTGG +
Preference number: 5 (lower is better)
Translates to: VTVGSDMVNSQGLRGSPDPGQSG*GPLSQW
Trigger: CCACTGGCTCAGTGGACCCAAACCAGACTGTCCTGG...ATCAGGACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CAA 90 bp CTCCCAAGTCTGAAATCACAAGATAGGGGGCATGGTCAGGAATCGGGGGTGGGGCCAGAGCAGGCTTTATaGGGGCCGTGTAAACCCCAG +
Preference number: 5 (lower is better)
Translates to: LPSLKSQDRGHGQESGVGPEQAL*GPCKPQ
Trigger: CTGGGGTTTACACGGCCCCAATAAAGCCTGCTCTGG...CCCCACCCCCGATTCCTGACCATGCCCCCTATCTTGTGATTTCAGACTTGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CAA 90 bp GGAGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGGCCCCAAGCTCGCTCTaGACTTCACTCTGGAGCTTC +
Preference number: 5 (lower is better)
Translates to: GEAGRGPQRVMYRLRFHLAPSSL*TSLWSF
Trigger: GAAGCTCCAGAGTGAAGTCAAGAGCGAGCTTGGGGC...CAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CAA 90 bp AGGTCGGTCCCACGCCCCGGTGACAGGGTGAACCCTGAGAGGAGCCCCCAAACTAGAAGGAACACTAACTaGCAACTCTGGCTAGGTTGT +
Preference number: 5 (lower is better)
Translates to: RSVPRPGDRVNPERSPQTRRNTN*QLWLGC
Trigger: ACAACCTAGCCAGAGTTGCAAGTTAGTGTTCCTTCT...AGTTTGGGGGCTCCTCTCAGGGTTCACCCTGTCACCGGGGCGTGGGACCGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CAA 90 bp CAGAGCAGGCTTTATTGGGGCCGTGTAAACCCCAGGGAGAGGCAGGACGTGGACAGTTCCAGAAGGGACTaGTGCTTCATGAAGCGGTGG +
Preference number: 5 (lower is better)
Translates to: QSRLYWGRVNPRERQDVDSSRRD*CFMKRW
Trigger: CCACCGCTTCATGAAGCACAAGTCCCTTCTGGAACT...GTCCACGTCCTGCCTCTCCCTGGGGTTTACACGGCCCCAATAAAGCCTGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS CCA 90 bp AGCTTGGTATCCAGTACGCATTCAGCACATGGAGGCCACACACGCTaGGCTCAAATGCTGTTCCTCATGCTGTTCCCTCCACCCTGCCTG +
Preference number: 5 (lower is better)
Translates to: SLVSSTHSAHGGHTR*AQMLFLMLFPPPCL
Trigger: CAGGCAGGGTGGAGGGAACAGCATGAGGAACAGCATTTGAGCCCAGCGTGTGTGGCCTCCATGTGCTGAATGCGTACTGGATACCAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000553894.6
ENST00000556776.1
ENST00000557413.6
CDS CCA 90 bp CCTCAGCTTAGAATGCCCTCTGCCCTCCTCTTGACCCAACTAAAGTaGGCCCAGCCTTACAAACTGGCACACCACCGAGAGATGTCCAGC +
Preference number: 5 (lower is better)
Translates to: PQLRMPSALLLTQLK*AQPYKLAHHREMSS
Trigger: GCTGGACATCTCTCGGTGGTGTGCCAGTTTGTAAGGCTGGGCCCACTTTAGTTGGGTCAAGAGGAGGGCAGAGGGCATTCTAAGCTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553646.1
CDS-3UTR CAA 90 bp AGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTCAGTCTCCTGCAAAGGTCCCTCCGGTaGCCGGGTCCTGGACCAGCT +
Preference number: 5 (lower is better)
Translates to: RESCTGCAFTCLLCLSLLQRSLR*PGPGPA
Trigger: AGCTGGTCCAGGACCCGGCAACCGGAGGGACCTTTG...CAGGAGACTGAGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp CATGAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTCCAGAGAGTGCCTCCTaGCACATGCTCCAGGTGCAG +
Preference number: 5 (lower is better)
Translates to: HEVTVGSDMVNSQGLRGSPESAS*HMLQVQ
Trigger: CTGCACCTGGAGCATGTGCAAGGAGGCACTCTCTGG...ACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp GGAGCCCCCAAACTGGAGGCAATTGTCTTTGAGGTAACCACTCACCCCAGCTTTCCAGAGAGTGCCTCCTaGCACATGCTCCAGGTGCAG +
Preference number: 5 (lower is better)
Translates to: GAPKLEAIVFEVTTHPSFPESAS*HMLQVQ
Trigger: CTGCACCTGGAGCATGTGCAAGGAGGCACTCTCTGG...AAAGCTGGGGTGAGTGGTTACCTCAAAGACAATTGCCTCCAGTTTGGGGGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp CCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGAAAAAGGGATGGGACTaGAGTTTGCTGACACCACCT +
Preference number: 5 (lower is better)
Translates to: PAGQTVPSIPRPKPADRGKKGWD*SLLTPP
Trigger: AGGTGGTGTCAGCAAACTCAAGTCCCATCCCTTTTT...CCCTCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp GGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCACGCCCCGGTGACAGGGAGGCTGCGCTTTCACTaGTCTTCTCTGTCTCAGTCT +
Preference number: 5 (lower is better)
Translates to: GQNSSGNFPGRSHAPVTGRLRFH*SSLSQS
Trigger: AGACTGAGACAGAGAAGACAAGTGAAAGCGCAGCCT...CCCTGTCACCGGGGCGTGGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CAA 90 bp CAGAGCAGGCTTTATTGGGGCCGTGTAAACCCCAGGGAGAGGCAGGACGTGGACGGCTTAAACACAGCCTaGTCTTTTCCAGAGTCCCTG +
Preference number: 5 (lower is better)
Translates to: QSRLYWGRVNPRERQDVDGLNTA*SFPESL
Trigger: CAGGGACTCTGGAAAAGACAAGGCTGTGTTTAAGCC...GTCCACGTCCTGCCTCTCCCTGGGGTTTACACGGCCCCAATAAAGCCTGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS CCA 90 bp TGTTGTCTCCTCCCTGCTCCTCCTGTGGGAATCTCATTTACCCTTTaGGGTTTAGCACTTCTCCGTGGACCGGATGGATTGCCCCTGCTG +
Preference number: 5 (lower is better)
Translates to: CCLLPAPPVGISFTL*GLALLRGPDGLPLL
Trigger: CAGCAGGGGCAATCCATCCGGTCCACGGAGAAGTGCTAAACCCCAAAGGGTAAATGAGATTCCCACAGGAGGAGCAGGGAGGAGACAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000553894.6
ENST00000556776.1
ENST00000557413.6
CDS-3UTR CAA 90 bp TGCTGGCAGGGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTTCACGTCGCTCCTTGTaGGGGTCAACGTGTATGCCA +
Preference number: 5 (lower is better)
Translates to: CWQGGAEGKTLVEISQVGSRRSL*GSTCMP
Trigger: TGGCATACACGTTGACCCCAACAAGGAGCGACGTGA...ACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCCCTGCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp GACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTCAGTCGCTGCAGGTGGCAGTaGAAGATCTCCTCTGCCCGC +
Preference number: 5 (lower is better)
Translates to: DHRESCTGCAFTCLLCLSRCRWQ*KISSAR
Trigger: GCGGGCAGAGGAGATCTTCAACTGCCACCTGCAGCG...ACTGAGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp AGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATAGAAAAAAGGGATGGGACTaGAGTTTGCTGACACCACCT +
Preference number: 5 (lower is better)
Translates to: SPAGQTVPSIPRPKPADRKKGWD*SLLTPP
Trigger: AGGTGGTGTCAGCAAACTCAAGTCCCATCCCTTTTT...TCTATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553315.1
ENST00000553971.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp TCCATTCCTCGCCCAAAGCCCGCTGATAGAGGGCCAGCCCTGGGTTGGGTGTCAAGAAGGAACACTAACTaGCAACTCTGGCTAGGTTGT +
Preference number: 5 (lower is better)
Translates to: SIPRPKPADRGPALGWVSRRNTN*QLWLGC
Trigger: ACAACCTAGCCAGAGTTGCAAGTTAGTGTTCCTTCT...TGACACCCAACCCAGGGCTGGCCCTCTATCAGCGGGCTTTGGGCGAGGAATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CAA 90 bp GGAGCCCAGCAGGACAGACAGTGCCCTCCATTCCTCGCCCAAAGCCCGCTGATATTGGATTTGATAGCCTaGTGGACCAAGATGCTCAAG +
Preference number: 5 (lower is better)
Translates to: GAQQDRQCPPFLAQSPLILDLIA*WTKMLK
Trigger: CTTGAGCATCTTGGTCCACAAGGCTATCAAATCCAA...TATCAGCGGGCTTTGGGCGAGGAATGGAGGGCACTGTCTGTCCTGCTGGGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CAA 90 bp CCACTCACCCCAGCTTTTCAGAGACCAGAGGCAAGACATTTCTGGCTAAGAGCCTGCAGCTGGGACCCTTaGGGGTTTAGCACTTCTCCG +
Preference number: 5 (lower is better)
Translates to: PLTPAFQRPEARHFWLRACSWDP*GFSTSP
Trigger: CGGAGAAGTGCTAAACCCCAAAGGGTCCCAGCTGCA...GGCTCTTAGCCAGAAATGTCTTGCCTCTGGTCTCTGAAAAGCTGGGGTGAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555647.5
CDS GCA 90 bp TTGGTGGTGGTTGGCCACCAACATATAGAAATGTGTTGCCCCTACTaGCCTCTGCACCCACATCAGACACTGAGCACGAAGCACACGTGG +
Preference number: 5 (lower is better)
Translates to: LVVVGHQHIEMCCPY*PLHPHQTLSTKHTW
Trigger: CCACGTGTGCTTCGTGCTCAGTGTCTGATGTGGGTGCAGAGGGCAGTAGGGGCAACACATTTCTATATGTTGGTGGCCAACCACCACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553646.1
ENST00000555834.5
ENST00000556848.5
CDS-3UTR CAA 90 bp CCAAAAGGGCATGAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGCGTGGACCGGATGGATaGCCCCTGCTGTGTTTTGTT +
Preference number: 5 (lower is better)
Translates to: PKGHEVTVGSDMVNSQGLRGPDG*PLLCFV
Trigger: AACAAAACACAGCAGGGGCAATCCATCCGGTCCACG...CAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTCATGCCCTTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp TGGCAGGGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCCCAGATAGTCACGTTTaGTCATGTCAGGCACTCCCA +
Preference number: 5 (lower is better)
Translates to: WQGGAEGKTLVEISQVGPPDSHV*SCQALP
Trigger: TGGGAGTGCCTGACATGACAAAACGTGACTATCTGG...GGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCCCTGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp CTCCCAAGTCTGAAATCACAAGATAGGGGGCATGGTCAGGAATCGGGGGTGGGGGCCCGCCGCAGGTATTaGGTAATTTTCAGCTTCACA +
Preference number: 5 (lower is better)
Translates to: LPSLKSQDRGHGQESGVGARRRY*VIFSFT
Trigger: TGTGAAGCTGAAAATTACCAAATACCTGCGGCGGGC...CCCCACCCCCGATTCCTGACCATGCCCCCTATCTTGTGATTTCAGACTTGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp AGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTCAGTCTCCTGCCAGAGAGTGCCTCCTaGCACATGCTCCAGGTGCAG +
Preference number: 5 (lower is better)
Translates to: RESCTGCAFTCLLCLSLLPESAS*HMLQVQ
Trigger: CTGCACCTGGAGCATGTGCAAGGAGGCACTCTCTGG...CAGGAGACTGAGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp TTCTGGCTAAGAGCCATGGATAGTTGTTCCATGCGTTTTGTGGTTTCTTATCCCGGCCACCTGGGGCCTTaGGAAGGTCCGAGGAGCCAG +
Preference number: 5 (lower is better)
Translates to: FWLRAMDSCSMRFVVSYPGHLGP*EGPRSQ
Trigger: CTGGCTCCTCGGACCTTCCAAAGGCCCCAGGTGGCC...GGGATAAGAAACCACAAAACGCATGGAACAACTATCCATGGCTCTTAGCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp CGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTGGCCTGGAAGCTGAATaGCTGTCCTCTTGCACCCCT +
Preference number: 5 (lower is better)
Translates to: RGPQRVMYRLRFHLSSLSGLEAE*LSSCTP
Trigger: AGGGGTGCAAGAGGACAGCAATTCAGCTTCCAGGCC...AGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CAA 90 bp GAGCTTCTACAGGGGAGCCTTCCAACCTGCCCCAATGAGCCGTGGTCATTGCATATTTCAGTGATGGATTaGGGAGGAGTGGGGGCATCT +
Preference number: 5 (lower is better)
Translates to: ELLQGSLPTCPNEPWSLHISVMD*GGVGAS
Trigger: AGATGCCCCCACTCCTCCCAAATCCATCACTGAAAT...ATGCAATGACCACGGCTCATTGGGGCAGGTTGGAAGGCTCCCCTGTAGAAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CAA 90 bp GGAGCCCCCAAACTGGAGGCAATTGTCTTTGAGGTAACCACTCACCCCAGCTTTAGTGCCCCACCTTCCTaGAGCCTGTCAAGCCATACT +
Preference number: 5 (lower is better)
Translates to: GAPKLEAIVFEVTTHPSFSAPPS*SLSSHT
Trigger: AGTATGGCTTGACAGGCTCAAGGAAGGTGGGGCACT...AAAGCTGGGGTGAGTGGTTACCTCAAAGACAATTGCCTCCAGTTTGGGGGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CAA 90 bp CATGAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTGATGTCCCCACCAGCTaGCTCCATTGGATGGTACTG +
Preference number: 5 (lower is better)
Translates to: HEVTVGSDMVNSQGLRGSDVPTS*LHWMVL
Trigger: CAGTACCATCCAATGGAGCAAGCTGGTGGGGACATC...ACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555009.5
CDS-3UTR CAA 90 bp CGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTCGTGGACCGGATGGATaGCCCCTGCTGTGTTTTGTT +
Preference number: 5 (lower is better)
Translates to: RGPQRVMYRLRFHLSSLSRGPDG*PLLCFV
Trigger: AACAAAACACAGCAGGGGCAATCCATCCGGTCCACG...AGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354625.6
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp GTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTCCTGATCTCCGTAGAGCAAGCTaGGTATCCAGTACGCATTCA +
Preference number: 5 (lower is better)
Translates to: VTVGSDMVNSQGLRGSPDLRRAS*VSSTHS
Trigger: TGAATGCGTACTGGATACCAAGCTTGCTCTACGGAG...ATCAGGACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CAA 90 bp TGCTGGCAGGGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCAGATAGTCACGTTTaGTCATGTCAGGCACTCCCA +
Preference number: 5 (lower is better)
Translates to: CWQGGAEGKTLVEISQVGPDSHV*SCQALP
Trigger: TGGGAGTGCCTGACATGACAAAACGTGACTATCTGG...ACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCCCTGCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp CTGGAGGCAATTGTCTTTGAGGTAACCACTCACCCCAGCTTTTCAGAGACCAGAGCCTCACGTCGCTCCTaGTTGGGGTCAACGTGTATG +
Preference number: 5 (lower is better)
Translates to: LEAIVFEVTTHPSFSETRASRRS*LGSTCM
Trigger: CATACACGTTGACCCCAACAAGGAGCGACGTGAGGC...TCTGGTCTCTGAAAAGCTGGGGTGAGTGGTTACCTCAAAGACAATTGCCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp AGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCAGGCTGCGCTTTCACTaGTCTTCTCTGTCTCAGTCT +
Preference number: 5 (lower is better)
Translates to: RGRTWTTESHVQAALSLVRLRFH*SSLSQS
Trigger: AGACTGAGACAGAGAAGACAAGTGAAAGCGCAGCCT...GACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CAA 90 bp AGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTCAGTCTCCTGCCAGAGCAGGCTTTATaGGGGCCGTGTAAACCCCAG +
Preference number: 5 (lower is better)
Translates to: RESCTGCAFTCLLCLSLLPEQAL*GPCKPQ
Trigger: CTGGGGTTTACACGGCCCCAATAAAGCCTGCTCTGG...CAGGAGACTGAGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CAA 90 bp CGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTAGTGCCCCACCTTCCTaGAGCCTGTCAAGCCATACT +
Preference number: 5 (lower is better)
Translates to: RGPQRVMYRLRFHLSSLSSAPPS*SLSSHT
Trigger: AGTATGGCTTGACAGGCTCAAGGAAGGTGGGGCACT...AGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS CCA 90 bp CAACCAGCTTTTGTGGGAGGGAGTGCAGGCTTCAAATGCAGGTTCTaGGTAGGAGTTTCCAAGAGCCCTGAGAAAGATCCAAGGGGAATG +
Preference number: 5 (lower is better)
Translates to: QPAFVGGSAGFKCRF*VGVSKSPEKDPRGM
Trigger: CATTCCCCTTGGATCTTTCTCAGGGCTCTTGGAAACTCCTACCCAGAACCTGCATTTGAAGCCTGCACTCCCTCCCACAAAAGCTGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554834.1
CDS-3UTR CAA 90 bp GTGGGGCACAACATGGCAGTGAGTGAGTCACAGAACCTCACAGTAGGGTGCAGCAATCTCATTTACCCTTaGGGGTTTAGCACTTCTCCG +
Preference number: 5 (lower is better)
Translates to: VGHNMAVSESQNLTVGCSNLIYP*GFSTSP
Trigger: CGGAGAAGTGCTAAACCCCAAAGGGTAAATGAGATT...GCTGCACCCTACTGTGAGGTTCTGTGACTCACTCACTGCCATGTTGTGCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CAA 90 bp GGAGCCCCCAAACTGGAGGCAATTGTCTTTGAGGTAACCACTCACCCCAGCTTTGCCCGCCGCAGGTATTaGGTAATTTTCAGCTTCACA +
Preference number: 5 (lower is better)
Translates to: GAPKLEAIVFEVTTHPSFARRRY*VIFSFT
Trigger: TGTGAAGCTGAAAATTACCAAATACCTGCGGCGGGC...AAAGCTGGGGTGAGTGGTTACCTCAAAGACAATTGCCTCCAGTTTGGGGGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS-3UTR CAA 90 bp CATGAAGTCACAGTAGGCAGTGACATGGTAAACAGCCAGGGCCTGAGAGGGAGTAATGAGCCGTGGTCATaGCATGGAAGAAGCGAGAAC +
Preference number: 5 (lower is better)
Translates to: HEVTVGSDMVNSQGLRGSNEPWS*HGRSEN
Trigger: GTTCTCGCTTCTTCCATGCAATGACCACGGCTCATT...ACTCCCTCTCAGGCCCTGGCTGTTTACCATGTCACTGCCTACTGTGACTTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CAA 90 bp TTCTGGCTAAGAGCCATGGATAGTTGTTCCATGCGTTTTGTGGTTTCTTATCCCCCAGGACAGTCTGGTTaGGGTCCACTGAGCCAGTGG +
Preference number: 5 (lower is better)
Translates to: FWLRAMDSCSMRFVVSYPPGQSG*GPLSQW
Trigger: CCACTGGCTCAGTGGACCCAAACCAGACTGTCCTGG...GGGATAAGAAACCACAAAACGCATGGAACAACTATCCATGGCTCTTAGCCAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CAA 90 bp GTCCTTAACCTTTTTGAGCTTCAGTTTTCTCAGGAGCTACCGTCTGTTGCAAGGGGCCTGGAAGCTGAATaGCTGTCCTCTTGCACCCCT +
Preference number: 5 (lower is better)
Translates to: VLNLFELQFSQELPSVARGLEAE*LSSCTP
Trigger: AGGGGTGCAAGAGGACAGCAATTCAGCTTCCAGGCC...CCTTGCAACAGACGGTAGCTCCTGAGAAAACTGAAGCTCAAAAAGGTTAAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CAA 90 bp CTGGAGGCAATTGTCTTTGAGGTAACCACTCACCCCAGCTTTTCAGAGACCAGAAGTTCCAGAAGGGACTaGTGCTTCATGAAGCGGTGG +
Preference number: 5 (lower is better)
Translates to: LEAIVFEVTTHPSFSETRSSRRD*CFMKRW
Trigger: CCACCGCTTCATGAAGCACAAGTCCCTTCTGGAACT...TCTGGTCTCTGAAAAGCTGGGGTGAGTGGTTACCTCAAAGACAATTGCCTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CAA 90 bp AGAGGCAGGACGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTGGATTTGATAGCCTaGTGGACCAAGATGCTCAAG +
Preference number: 5 (lower is better)
Translates to: RGRTWTTESHVQAALSLVLDLIA*WTKMLK
Trigger: CTTGAGCATCTTGGTCCACAAGGCTATCAAATCCAA...GACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACGTCCTGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CAA 90 bp TGGCAGGGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTCCCGGCATCTCATTTCATTaGGATTTGATAGCCTTGTGG +
Preference number: 5 (lower is better)
Translates to: WQGGAEGKTLVEISQVGPGISFH*DLIALW
Trigger: CCACAAGGCTATCAAATCCAAATGAAATGAGATGCC...GGGACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCCCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CAA 90 bp GAGTGGGGGCATCTCATTTCATTTGGATTTGATAGCCTTGTGGACCAAGATGCTCGTGGACCGGATGGATaGCCCCTGCTGTGTTTTGTT +
Preference number: 5 (lower is better)
Translates to: EWGHLISFGFDSLVDQDARGPDG*PLLCFV
Trigger: AACAAAACACAGCAGGGGCAATCCATCCGGTCCACG...AGCATCTTGGTCCACAAGGCTATCAAATCCAAATGAAATGAGATGCCCCCACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CAA 90 bp CCACTCACCCCAGCTTTTCAGAGACCAGAGGCAAGACATTTCTGGCTAAGAGCCAATCTCATTTACCCTTaGGGGTTTAGCACTTCTCCG +
Preference number: 5 (lower is better)
Translates to: PLTPAFQRPEARHFWLRANLIYP*GFSTSP
Trigger: CGGAGAAGTGCTAAACCCCAAAGGGTAAATGAGATT...GGCTCTTAGCCAGAAATGTCTTGCCTCTGGTCTCTGAAAAGCTGGGGTGAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CAA 90 bp TGCTGGCAGGGAGGAGCTGAGGGCAAAACTCTAGTGGAAATTTCCCAGGTCGGTGGCATCTCATTTCATTaGGATTTGATAGCCTTGTGG +
Preference number: 5 (lower is better)
Translates to: CWQGGAEGKTLVEISQVGGISFH*DLIALW
Trigger: CCACAAGGCTATCAAATCCAAATGAAATGAGATGCC...ACCGACCTGGGAAATTTCCACTAGAGTTTTGCCCTCAGCTCCTCCCTGCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CAA 90 bp CTCTTAGGAGATCCTGAGAACATGTGTCCAGGGTCGTCTGGCTACAACTTAGTTCCAGATAGTCACGTTTaGTCATGTCAGGCACTCCCA +
Preference number: 5 (lower is better)
Translates to: LLGDPENMCPGSSGYNLVPDSHV*SCQALP
Trigger: TGGGAGTGCCTGACATGACAAAACGTGACTATCTGG...AACTAAGTTGTAGCCAGACGACCCTGGACACATGTTCTCAGGATCTCCTAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CAA 90 bp AGTATAATGAGGAATGGCTGGCTCCCTCTTCCCACCATGGCCCGAACTAGCGTTGTGTCCTTAACCTTTTaGAGCTTCAGTTTTCTCAGG +
Preference number: 5 (lower is better)
Translates to: SIMRNGWLPLPTMARTSVVSLTF*SFSFLR
Trigger: CCTGAGAAAACTGAAGCTCAAAAAGGTTAAGGACAC...AACGCTAGTTCGGGCCATGGTGGGAAGAGGGAGCCAGCCATTCCTCATTATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS CCA 90 bp GTATGTGTATGTGTATGTGTGTGTGTGCATGCATGTGTGTCCATCTaGAAAGTGGGGCATGTTCAGGCAGAACAACCAGCTTTTGTGGGA +
Preference number: 5 (lower is better)
Translates to: VCVCVCVCVHACVSI*KVGHVQAEQPAFVG
Trigger: TCCCACAAAAGCTGGTTGTTCTGCCTGAACATGCCCCACTTTCCAGATGGACACACATGCATGCACACACACACATACACATACACATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554834.1
CDS-3UTR CAA 90 bp CGTGGACCACAGAGAGTCATGTACAGGCTGCGCTTTCACTTGTCTTCTCTGTCTGTGTCCTTAACCTTTTaGAGCTTCAGTTTTCTCAGG +
Preference number: 5 (lower is better)
Translates to: RGPQRVMYRLRFHLSSLSVSLTF*SFSFLR
Trigger: CCTGAGAAAACTGAAGCTCAAAAAGGTTAAGGACAC...AGACAGAGAAGACAAGTGAAAGCGCAGCCTGTACATGACTCTCTGTGGTCCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354625.6
ENST00000557413.6
CDS-3UTR CAA 90 bp CCATGCGTTTTGTGGTTTCTTATCCCAAAAGGGCATGAAGTCACAGTAGGCAGTAAAAAGGGATGGGACTaGAGTTTGCTGACACCACCT +
Preference number: 5 (lower is better)
Translates to: PCVLWFLIPKGHEVTVGSKKGWD*SLLTPP
Trigger: AGGTGGTGTCAGCAAACTCAAGTCCCATCCCTTTTT...ACTGCCTACTGTGACTTCATGCCCTTTTGGGATAAGAAACCACAAAACGCATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS-3UTR CAA 90 bp TTCTGGCTAAGAGCCATGGATAGTTGTTCCATGCGTTTTGTGGTTTCTTATCCCAGGCTGCGCTTTCACTaGTCTTCTCTGTCTCAGTCT +
Preference number: 5 (lower is better)
Translates to: FWLRAMDSCSMRFVVSYPRLRFH*SSLSQS
Trigger: AGACTGAGACAGAGAAGACAAGTGAAAGCGCAGCCT...GGGATAAGAAACCACAAAACGCATGGAACAACTATCCATGGCTCTTAGCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000555009.5
ENST00000555647.5
ENST00000555910.5
ENST00000557413.6
CDS GCA 90 bp GTGTTTGTGTGTATGTGTATGTGTATGTGTATGTGTGTGTGTGCATaGATGTGTGTCCATCTGGAAAGTGGGGCATGTTCAGGCAGAACA +
Preference number: 5 (lower is better)
Translates to: VFVCMCMCMCMCVCA*MCVHLESGACSGRT
Trigger: TGTTCTGCCTGAACATGCCCCACTTTCCAGATGGACACACATGCATGCACACACACACATACACATACACATACACATACACACAAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554834.1
CDS GCA 90 bp ATGTGTGTTTGTGTGTATGTGTATGTGTATGTGTATGTGTGTGTGTaGATGCATGTGTGTCCATCTGGAAAGTGGGGCATGTTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: MCVCVYVYVYVYVCV*MHVCPSGKWGMFRQ
Trigger: CTGCCTGAACATGCCCCACTTTCCAGATGGACACACATGCATGCACACACACACATACACATACACATACACATACACACAAACACACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554834.1
CDS GCA 72 bp TACCGGCCCTTCACGCCAGAGCGCGCCGCGGGCCGCTaGTTTCCGGCATCCAGCGTGCGGGGCCAGCCGGTG +
Preference number: 6 (lower is better)
Translates to: YRPFTPERAAGR*FPASSVRGQPV
Trigger: CACCGGCTGGCCCCGCACGCTGGATGCCGGAAAGCAGCGGCCCGCGGCGCGCTCTGGCGTGAAGGGCCGGTA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555647.5
CDS GCA 72 bp GGCCGGCCCCATCTGCTGACAGGCAGCTCTGATCCATaGCTCGGCCACAGCCCCCTAGCACCGGGCCGGCCC +
Preference number: 6 (lower is better)
Translates to: GRPHLLTGSSDP*LGHSPLAPGRP
Trigger: GGGCCGGCCCGGTGCTAGGGGGCTGTGGCCGAGGCATGGATCAGAGCTGCCTGTCAGCAGATGGGGCCGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354625.6
ENST00000553646.1
ENST00000555009.5
ENST00000555647.5
ENST00000555834.5
ENST00000557413.6
CDS GCA 72 bp CCGGGGTGGAGGTCCCGGCACAGCACCCCCTGCTCGTaGAGCGCCTCCAGCGCTACCAGCATCTCTGCCGCC +
Preference number: 6 (lower is better)
Translates to: PGWRSRHSTPCS*SASSATSISAA
Trigger: GGCGGCAGAGATGCTGGTAGCGCTGGAGGCGCTGCACGAGCAGGGGGTGCTGTGCCGGGACCTCCACCCCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354625.6
ENST00000553646.1
ENST00000555009.5
ENST00000555647.5
ENST00000555834.5
ENST00000556848.5
ENST00000557413.6
CDS GCA 72 bp CCCGCGCTGGGGCTGGCTCCACTGCTCAGCGGCCGCTaGAGGTGGCAGTTGAAGATCTCCTCTGCCCGCCGC +
Preference number: 6 (lower is better)
Translates to: PALGLAPLLSGR*RWQLKISSARR
Trigger: GCGGCGGGCAGAGGAGATCTTCAACTGCCACCTGCAGCGGCCGCTGAGCAGTGGAGCCAGCCCCAGCGCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354625.6
ENST00000553894.6
ENST00000554900.1
ENST00000555647.5
ENST00000555834.5
ENST00000557413.6
CDS CCA 72 bp CGGGGCTGGGCAGGCACTCACAGGCCACCAGGCTCATaGCTGCCCTGCAGCTGGGACCTGCCCGAGCTGGGA +
Preference number: 6 (lower is better)
Translates to: RGWAGTHRPPGS*LPCSWDLPELG
Trigger: TCCCAGCTCGGGCAGGTCCCAGCTGCAGGGCAGCCATGAGCCTGGTGGCCTGTGAGTGCCTGCCCAGCCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555834.5
CDS GCA 72 bp ACCGCGCTGGGGCTGGCTCCACTGCTCAGCGGCCGCTaGAGGTGGCAGTTGAAGATCTCCTCTGCCCGCCGC +
Preference number: 6 (lower is better)
Translates to: TALGLAPLLSGR*RWQLKISSARR
Trigger: GCGGCGGGCAGAGGAGATCTTCAACTGCCACCTGCAGCGGCCGCTGAGCAGTGGAGCCAGCCCCAGCGCGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555009.5
CDS CCA 72 bp CACCTACCTGCCTGGTCCAGGAGCAGGTTCCCGGGGTaGAGGTCCCGGCACAGCACCCCCTGCTCGTGCAGC +
Preference number: 6 (lower is better)
Translates to: HLPAWSRSRFPG*RSRHSTPCSCS
Trigger: GCTGCACGAGCAGGGGGTGCTGTGCCGGGACCTCCACCCCGGGAACCTGCTCCTGGACCAGGCAGGTAGGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553646.1
ENST00000555834.5
CDS CCA 72 bp CTGACCACTGCCTGGTCCAGGAGCAGGTTCCCGGGGTaGAGGTCCCGGCACAGCACCCCCTGCTCGTGCAGC +
Preference number: 6 (lower is better)
Translates to: LTTAWSRSRFPG*RSRHSTPCSCS
Trigger: GCTGCACGAGCAGGGGGTGCTGTGCCGGGACCTCCACCCCGGGAACCTGCTCCTGGACCAGGCAGTGGTCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556848.5
CDS TCA 72 bp GCAGCAGCTCAGTCAGCAGAGAGGCCGCTGGGCGACTaGGCCACTCGGGCAGCTGGAGCTGGGTGTGGGCCT +
Preference number: 6 (lower is better)
Translates to: AAAQSAERPLGD*ATRAAGAGCGP
Trigger: AGGCCCACACCCAGCTCCAGCTGCCCGAGTGGCTCAGTCGCCCAGCGGCCTCTCTGCTGACTGAGCTGCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553789.5
ENST00000555009.5
ENST00000555647.5
ENST00000557413.6
CDS GCA 72 bp AGGTTCCCGGGGTGGAGGTCCCGGCACAGCACCCCCTaGTCGTGCAGCGCCTCCAGCGCTACCAGCATCTCT +
Preference number: 6 (lower is better)
Translates to: RFPGWRSRHSTP*SCSASSATSIS
Trigger: AGAGATGCTGGTAGCGCTGGAGGCGCTGCACGAGCAGGGGGTGCTGTGCCGGGACCTCCACCCCGGGAACCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354625.6
ENST00000553646.1
ENST00000555009.5
ENST00000555647.5
ENST00000555834.5
ENST00000556848.5
ENST00000557413.6
CDS CAA 90 bp CCATGTGGCACCTGGGTAGGCTCTTCACCACAAAGGTCCCTCCGGTaGCCGGGTCCTGGACCAGCTGCACCGCGCTGGGGCTGGCTCCAC +
Preference number: 6 (lower is better)
Translates to: PCGTWVGSSPQRSLR*PGPGPAAPRWGWLH
Trigger: GTGGAGCCAGCCCCAGCGCGGTGCAGCTGGTCCAGGACCCGGCAACCGGAGGGACCTTTGTGGTGAAGAGCCTACCCAGGTGCCACATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555009.5
CDS GCA 72 bp GCTGGGCAGGCACTCACAGGCCACCAGGCTCATGGCTaGCCTGCAGCTGGGACCATGTTGGCCAGGCTGGTC +
Preference number: 6 (lower is better)
Translates to: AGQALTGHQAHG*PAAGTMLARLV
Trigger: GACCAGCCTGGCCAACATGGTCCCAGCTGCAGGGCAGCCATGAGCCTGGTGGCCTGTGAGTGCCTGCCCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000553894.6
ENST00000555009.5
ENST00000557413.6
CDS CCA 72 bp GGAGGCTCCAGGGCGATTCTGTCCTGGCCAGGGGCATaGCCTGAGGGAAGCCTCGCTGGGGTCAGGAGGTTG +
Preference number: 6 (lower is better)
Translates to: GGSRAILSWPGA*PEGSLAGVRRL
Trigger: CAACCTCCTGACCCCAGCGAGGCTTCCCTCAGGCCATGCCCCTGGCCAGGACAGAATCGCCCTGGAGCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354625.6
ENST00000553646.1
ENST00000554834.1
ENST00000555009.5
ENST00000555647.5
ENST00000555834.5
ENST00000557413.6
CDS CCA 72 bp CGGGGCTGGGCAGGCACTCACAGGCCACCAGGCTCATaGCTGCCCTGCAGCTGGGACCCTTTGGGGTTTAGC +
Preference number: 6 (lower is better)
Translates to: RGWAGTHRPPGS*LPCSWDPLGFS
Trigger: GCTAAACCCCAAAGGGTCCCAGCTGCAGGGCAGCCATGAGCCTGGTGGCCTGTGAGTGCCTGCCCAGCCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555647.5
CDS GCA 72 bp AGCGCCTCCAGCGCTACCAGCATCTCTGCCGCCCACTaGTTCACCTGCTCCTCTCTCACACTCCAGGTGGCC +
Preference number: 6 (lower is better)
Translates to: SASSATSISAAH*FTCSSLTLQVA
Trigger: GGCCACCTGGAGTGTGAGAGAGGAGCAGGTGAAGCAGTGGGCGGCAGAGATGCTGGTAGCGCTGGAGGCGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354625.6
ENST00000553646.1
ENST00000555009.5
ENST00000555647.5
ENST00000555834.5
ENST00000557413.6
CDS CCA 72 bp CCTAGCTTGAAGGTGCAGGTGGCCACCTGGGGCCTTTaGAAGGTCCGAGGAGCCAGAGGTGCTGGTCCTGGC +
Preference number: 6 (lower is better)
Translates to: PSLKVQVATWGL*KVRGARGAGPG
Trigger: GCCAGGACCAGCACCTCTGGCTCCTCGGACCTTCCAAAGGCCCCAGGTGGCCACCTGCACCTTCAAGCTAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354625.6
ENST00000553646.1
ENST00000555009.5
ENST00000555647.5
ENST00000555834.5
ENST00000557413.6
CDS CCA 72 bp GGCCCAGTCAGCTGGGCCACTCCAGCTGTGGAGGCATaGGGTGACCTCCAGGGACTCCAACCACTATGGCCT +
Preference number: 6 (lower is better)
Translates to: GPVSWATPAVEA*GDLQGLQPLWP
Trigger: AGGCCATAGTGGTTGGAGTCCCTGGAGGTCACCCCATGCCTCCACAGCTGGAGTGGCCCAGCTGACTGGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553646.1
ENST00000555834.5
ENST00000556848.5
CDS GCA 72 bp CTGCTCGTGCAGCGCCTCCAGCGCTACCAGCATCTCTaGCGCCCACTGCTTCACCTGCTCCTCTCTCACACT +
Preference number: 6 (lower is better)
Translates to: LLVQRLQRYQHL*RPLLHLLLSHT
Trigger: AGTGTGAGAGAGGAGCAGGTGAAGCAGTGGGCGGCAGAGATGCTGGTAGCGCTGGAGGCGCTGCACGAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354625.6
ENST00000553646.1
ENST00000555009.5
ENST00000555647.5
ENST00000555834.5
ENST00000556848.5
ENST00000557413.6
CDS CCA 72 bp AGCCCAGAATGTCGGGAGTGCGCCTGGGAGAGCAGGTaGGACCAGAGAGTGCCTCCTTGCACATGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: SPECRECAWESR*DQRVPPCTCSR
Trigger: CCTGGAGCATGTGCAAGGAGGCACTCTCTGGTCCCACCTGCTCTCCCAGGCGCACTCCCGACATTCTGGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354625.6
ENST00000554834.1
ENST00000555009.5
ENST00000555647.5
ENST00000555834.5
ENST00000557413.6
CDS CCA 72 bp CCCCAACAGTCATGCGGTAGGAGCCAATGGCCTTGCTaGGCAGAAACTCGGCAGGGGCACAGCACCCTCCAC +
Preference number: 6 (lower is better)
Translates to: PQQSCGRSQWPC*AETRQGHSTLH
Trigger: GTGGAGGGTGCTGTGCCCCTGCCGAGTTTCTGCCCAGCAAGGCCATTGGCTCCTACCGCATGACTGTTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553646.1
ENST00000555834.5
CDS CCA 72 bp CAGGGCTTCCCCCAACAGTCATGCGGTAGGAGCCAATaGCCTTGCTGGGCAGAAACTCGGCAGGGGCACAGC +
Preference number: 6 (lower is better)
Translates to: QGFPQQSCGRSQ*PCWAETRQGHS
Trigger: GCTGTGCCCCTGCCGAGTTTCTGCCCAGCAAGGCCATTGGCTCCTACCGCATGACTGTTGGGGGAAGCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553646.1
ENST00000555834.5
CDS CCA 72 bp CCCAGCACCTTCCTCAGGCTAGGCAGCTGCTTCCTCTaGCCGGGCTACACCTCACCTCAGTCAGCAGAGAGG +
Preference number: 6 (lower is better)
Translates to: PSTFLRLGSCFL*PGYTSPQSAER
Trigger: CCTCTCTGCTGACTGAGGTGAGGTGTAGCCCGGCCAGAGGAAGCAGCTGCCTAGCCTGAGGAAGGTGCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553646.1
ENST00000555834.5
ENST00000556848.5
CDS CAA 90 bp GCGCTGGGGCTGGCTCCACTGCTCAGCGGCCGCTGCAGGTGGCAGTaGAAGATCTCCTCTGCCCGCCGCAGGTATTTGGTAATTTTCAGC +
Preference number: 6 (lower is better)
Translates to: ALGLAPLLSGRCRWQ*KISSARRRYLVIFS
Trigger: GCTGAAAATTACCAAATACCTGCGGCGGGCAGAGGAGATCTTCAACTGCCACCTGCAGCGGCCGCTGAGCAGTGGAGCCAGCCCCAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354625.6
ENST00000553894.6
ENST00000554900.1
ENST00000555009.5
ENST00000555647.5
ENST00000555834.5
ENST00000557413.6
CDS TCA 72 bp AGTCAGCTGGGCCACTCCAGCTGTGGAGGCATGGGGTaGCCTCCAGGGACTCCAACCACTATGGCCTCTAGG +
Preference number: 6 (lower is better)
Translates to: SQLGHSSCGGMG*PPGTPTTMASR
Trigger: CCTAGAGGCCATAGTGGTTGGAGTCCCTGGAGGTCACCCCATGCCTCCACAGCTGGAGTGGCCCAGCTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553646.1
ENST00000555834.5
ENST00000556848.5
CDS GCA 72 bp TTCCCCCAACAGTCATGCGGTAGGAGCCAATGGCCTTaGTGGGCAGAAACTCGGCAGGGGCACAGCACCCTC +
Preference number: 6 (lower is better)
Translates to: FPQQSCGRSQWP*WAETRQGHSTL
Trigger: GAGGGTGCTGTGCCCCTGCCGAGTTTCTGCCCAGCAAGGCCATTGGCTCCTACCGCATGACTGTTGGGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553646.1
ENST00000555834.5
CDS CCA 72 bp TGCAGCAGCTTCCTCAGGCTAGGCAGCTGCTTCCTCTaGCCGGGCTACACCTCACCTCAGTCAGCAGAGAGG +
Preference number: 6 (lower is better)
Translates to: CSSFLRLGSCFL*PGYTSPQSAER
Trigger: CCTCTCTGCTGACTGAGGTGAGGTGTAGCCCGGCCAGAGGAAGCAGCTGCCTAGCCTGAGGAAGCTGCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553315.1
CDS CCA 72 bp GGGAGGAGCAGACAACCTTGGAGGTCCCCTCGACTTTaGGGATCTCTCGTCCTCTGCCTGGACGCTTTGGGG +
Preference number: 6 (lower is better)
Translates to: GRSRQPWRSPRL*GSLVLCLDALG
Trigger: CCCCAAAGCGTCCAGGCAGAGGACGAGAGATCCCCAAAGTCGAGGGGACCTCCAAGGTTGTCTGCTCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553646.1
ENST00000555834.5
CDS CAA 72 bp CTGGCTCCACTGCTCAGCGGCCGCTGCAGGTGGCAGTaGAAGATCTCCTCTGCCCGCCGCAGGTATTTGGTA +
Preference number: 6 (lower is better)
Translates to: LAPLLSGRCRWQ*KISSARRRYLV
Trigger: TACCAAATACCTGCGGCGGGCAGAGGAGATCTTCAACTGCCACCTGCAGCGGCCGCTGAGCAGTGGAGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354625.6
ENST00000553894.6
ENST00000554900.1
ENST00000555009.5
ENST00000555647.5
ENST00000555834.5
ENST00000557413.6
CDS GCA 72 bp TGCCTCCCTCAGTTCCTGACCTGTCCTTACCCCCACTaGCCCTGTAGAATCTGGGTCCTCCACCCTCTAGCC +
Preference number: 6 (lower is better)
Translates to: CLPQFLTCPYPH*PCRIWVLHPLA
Trigger: GGCTAGAGGGTGGAGGACCCAGATTCTACAGGGGCAGTGGGGGTAAGGACAGGTCAGGAACTGAGGGAGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554834.1
CDS CCA 72 bp AGCTGGAGCTGGGTGTGGGCCTGGATTCCTGAAGGGTaGCTCTGGGACAGTGCCATTCCCGTCAGCAGTTCA +
Preference number: 6 (lower is better)
Translates to: SWSWVWAWIPEG*LWDSAIPVSSS
Trigger: TGAACTGCTGACGGGAATGGCACTGTCCCAGAGCCACCCTTCAGGAATCCAGGCCCACACCCAGCTCCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354625.6
ENST00000553646.1
ENST00000553789.5
ENST00000555009.5
ENST00000555647.5
ENST00000555834.5
ENST00000556848.5
ENST00000557413.6
CDS CCA 72 bp CACCAGGCTCATGGCTGCCCTGCAGCTGGGACCCTTTaGGGTTTAGCACTTCTCCGTGGACCGGATGGATTG +
Preference number: 6 (lower is better)
Translates to: HQAHGCPAAGTL*GLALLRGPDGL
Trigger: CAATCCATCCGGTCCACGGAGAAGTGCTAAACCCCAAAGGGTCCCAGCTGCAGGGCAGCCATGAGCCTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555647.5
CDS CAA 72 bp AGGGAGGAGCAGACAACCTTGGAGGTCCCCTCGACTTaGGGGATCTCTCGTCCTCTGCCTGGACGCTTTGGG +
Preference number: 6 (lower is better)
Translates to: REEQTTLEVPST*GISRPLPGRFG
Trigger: CCCAAAGCGTCCAGGCAGAGGACGAGAGATCCCCAAAGTCGAGGGGACCTCCAAGGTTGTCTGCTCCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553646.1
ENST00000555834.5
CDS CAA 72 bp CCACCAGGCTCATGGCTGCCCTGCAGCTGGGACCCTTaGGGGTTTAGCACTTCTCCGTGGACCGGATGGATT +
Preference number: 6 (lower is better)
Translates to: PPGSWLPCSWDP*GFSTSPWTGWI
Trigger: AATCCATCCGGTCCACGGAGAAGTGCTAAACCCCAAAGGGTCCCAGCTGCAGGGCAGCCATGAGCCTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555647.5
CDS CCA 72 bp TGTGGGATGATGGTCAGCCGCTCCCTGCTCACCATGTaGCACCTGGGTAGGCTCTTCACCACAAAGGTCCCT +
Preference number: 6 (lower is better)
Translates to: CGMMVSRSLLTM*HLGRLFTTKVP
Trigger: AGGGACCTTTGTGGTGAAGAGCCTACCCAGGTGCCACATGGTGAGCAGGGAGCGGCTGACCATCATCCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354625.6
ENST00000553894.6
ENST00000555009.5
ENST00000555647.5
ENST00000555834.5
ENST00000557413.6
CDS CCA 72 bp GTACCTGAGCAGCTTCGTCATGTAGGGGACTCCGTGTaGGATGATGGTCAGCCGCTCCCTGCTCACCATGTG +
Preference number: 6 (lower is better)
Translates to: VPEQLRHVGDSV*DDGQPLPAHHV
Trigger: CACATGGTGAGCAGGGAGCGGCTGACCATCATCCCACACGGAGTCCCCTACATGACGAAGCTGCTCAGGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354625.6
ENST00000553894.6
ENST00000554834.1
ENST00000555009.5
ENST00000555647.5
ENST00000555834.5
ENST00000557413.6
CDS GCA 72 bp ATGGCTGCCCTGCAGCTGGGACCTGGAATGGGCAAATaGATTAGGGAGGACCTAGCTGGTAGCAACACCCCT +
Preference number: 6 (lower is better)
Translates to: MAALQLGPGMGK*IREDLAGSNTP
Trigger: AGGGGTGTTGCTACCAGCTAGGTCCTCCCTAATGCATTTGCCCATTCCAGGTCCCAGCTGCAGGGCAGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557383.1
CDS CCA 72 bp CTGCACCCACATCAGACACTGAGCACGAAGCACACGTaGTTCAGACACAGTTCTGTGCCCCTCCCAGCACCT +
Preference number: 6 (lower is better)
Translates to: LHPHQTLSTKHT*FRHSSVPLPAP
Trigger: AGGTGCTGGGAGGGGCACAGAACTGTGTCTGAACCACGTGTGCTTCGTGCTCAGTGTCTGATGTGGGTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553646.1
ENST00000555834.5
ENST00000556848.5
CDS CAA 72 bp GGACCGGATGGATTGCCCCTGCTGTGTTTTGTTCCCTaGGTCCTGAGGTCAGTGTGGTCAGCGAGTGAGGAC +
Preference number: 6 (lower is better)
Translates to: GPDGLPLLCFVP*VLRSVWSASED
Trigger: GTCCTCACTCGCTGACCACACTGACCTCAGGACCAAGGGAACAAAACACAGCAGGGGCAATCCATCCGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354625.6
ENST00000553894.6
ENST00000555647.5
ENST00000556776.1
ENST00000557413.6
CDS CAA 72 bp CCACAGCCACCTTCACAGGGCCTCCGTAGAGCAAGCTaGGTATCCAGTACGCATTCAGCACATGGAGGCCAC +
Preference number: 6 (lower is better)
Translates to: PQPPSQGLRRAS*VSSTHSAHGGH
Trigger: GTGGCCTCCATGTGCTGAATGCGTACTGGATACCAAGCTTGCTCTACGGAGGCCCTGTGAAGGTGGCTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000553894.6
ENST00000556776.1
ENST00000557413.6
CDS CAA 90 bp ATCTGTGATCCACAGCCACCTTCACAGGGCCTCCGTAGAGCAAGCTaGGTATCCAGTACGCATTCAGCACATGGAGGCCACACACGCTGG +
Preference number: 6 (lower is better)
Translates to: ICDPQPPSQGLRRAS*VSSTHSAHGGHTRW
Trigger: CCAGCGTGTGTGGCCTCCATGTGCTGAATGCGTACTGGATACCAAGCTTGCTCTACGGAGGCCCTGTGAAGGTGGCTGTGGATCACAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000553894.6
ENST00000556776.1
ENST00000557413.6
CDS CAA 90 bp CGCTGCAGGTGGCAGTTGAAGATCTCCTCTGCCCGCCGCAGGTATTaGGTAATTTTCAGCTTCACAGCCTCACGTCGCTCCTTGTTGGGG +
Preference number: 6 (lower is better)
Translates to: RCRWQLKISSARRRY*VIFSFTASRRSLLG
Trigger: CCCCAACAAGGAGCGACGTGAGGCTGTGAAGCTGAAAATTACCAAATACCTGCGGCGGGCAGAGGAGATCTTCAACTGCCACCTGCAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354625.6
ENST00000553894.6
ENST00000554900.1
ENST00000555009.5
ENST00000555647.5
ENST00000555834.5
ENST00000557383.1
ENST00000557413.6
CDS TCA 72 bp GGTGCAGGAAGATGGAGTCCTCGCTCACAAAGTACCTaGGCAGCTTCGTCATGTAGGGGACTCCGTGTGGGA +
Preference number: 6 (lower is better)
Translates to: GAGRWSPRSQST*AASSCRGLRVG
Trigger: TCCCACACGGAGTCCCCTACATGACGAAGCTGCTCAGGTACTTTGTGAGCGAGGACTCCATCTTCCTGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354625.6
ENST00000553789.5
ENST00000553894.6
ENST00000554834.1
ENST00000555009.5
ENST00000555647.5
ENST00000555834.5
ENST00000557413.6
CDS TCA 72 bp ACTGGGGCTCCACCTCTGACCACTGGCCAAAATATGTaGGCCGGATGTGACCTTGCACATGCTCCAGGTGCA +
Preference number: 6 (lower is better)
Translates to: TGAPPLTTGQNM*AGCDLAHAPGA
Trigger: TGCACCTGGAGCATGTGCAAGGTCACATCCGGCTCACATATTTTGGCCAGTGGTCAGAGGTGGAGCCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553789.5
ENST00000553971.5
CDS TCA 72 bp GTTGCCCCTACTGCCCTCTGCACCCACATCAGACACTaGGCACGAAGCACACGTGGTTCAGACACAGTTCTG +
Preference number: 6 (lower is better)
Translates to: VAPTALCTHIRH*ARSTRGSDTVL
Trigger: CAGAACTGTGTCTGAACCACGTGTGCTTCGTGCTCAGTGTCTGATGTGGGTGCAGAGGGCAGTAGGGGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553646.1
ENST00000555834.5
ENST00000556848.5
CDS GCA 72 bp ATTCAGCACATGGAGGCCACACACGCTGGGCTCAAATaGTGTTCCTCATGCTGTTCCCTCCACCCTGCCTGT +
Preference number: 6 (lower is better)
Translates to: IQHMEATHAGLK*CSSCCSLHPAC
Trigger: ACAGGCAGGGTGGAGGGAACAGCATGAGGAACAGCATTTGAGCCCAGCGTGTGTGGCCTCCATGTGCTGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000553894.6
ENST00000556776.1
ENST00000557413.6
CDS CCA 72 bp CACAGCCACCTTCACAGGGCCTCCGTAGAGCAAGCTTaGTATCCAGTACGCATTCAGCACATGGAGGCCACA +
Preference number: 6 (lower is better)
Translates to: HSHLHRASVEQA*YPVRIQHMEAT
Trigger: TGTGGCCTCCATGTGCTGAATGCGTACTGGATACCAAGCTTGCTCTACGGAGGCCCTGTGAAGGTGGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000553894.6
ENST00000556776.1
ENST00000557413.6
CDS CCA 72 bp AGAATGCCCTCTGCCCTCCTCTTGACCCAACTAAAGTaGGCCCAGCCTTACAAACTGGCACACCACCGAGAG +
Preference number: 6 (lower is better)
Translates to: RMPSALLLTQLK*AQPYKLAHHRE
Trigger: CTCTCGGTGGTGTGCCAGTTTGTAAGGCTGGGCCCACTTTAGTTGGGTCAAGAGGAGGGCAGAGGGCATTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553646.1
CDS CAA 90 bp CTGTTGTCTCCTCCCTGCTCCTCCTGTGGGAATCTCATTTACCCTTaGGGGTTTAGCACTTCTCCGTGGACCGGATGGATTGCCCCTGCT +
Preference number: 6 (lower is better)
Translates to: LLSPPCSSCGNLIYP*GFSTSPWTGWIAPA
Trigger: AGCAGGGGCAATCCATCCGGTCCACGGAGAAGTGCTAAACCCCAAAGGGTAAATGAGATTCCCACAGGAGGAGCAGGGAGGAGACAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000553894.6
ENST00000556776.1
ENST00000557413.6
CDS TCA 72 bp CAGCGCCAGTGCCACAGAAGGCAACCTTTAACATGGTaGGTCCACATGCTCAACGGGTCTGTTGACCCACCA +
Preference number: 6 (lower is better)
Translates to: QRQCHRRQPLTW*VHMLNGSVDPP
Trigger: TGGTGGGTCAACAGACCCGTTGAGCATGTGGACTCACCATGTTAAAGGTTGCCTTCTGTGGCACTGGCGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555910.5
CDS TCA 72 bp ACTGGGGCTCCACCTCTGACCACTGGCCAAAATATGTaGGCCGGATGTGACCTCCAGTGTGTGGGAGGAAAA +
Preference number: 6 (lower is better)
Translates to: TGAPPLTTGQNM*AGCDLQCVGGK
Trigger: TTTTCCTCCCACACACTGGAGGTCACATCCGGCTCACATATTTTGGCCAGTGGTCAGAGGTGGAGCCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553646.1
ENST00000555834.5
CDS CCA 72 bp TCCAGTACGCATTCAGCACATGGAGGCCACACACGCTaGGCTCAAATGCTGTTCCTCATGCTGTTCCCTCCA +
Preference number: 6 (lower is better)
Translates to: SSTHSAHGGHTR*AQMLFLMLFPP
Trigger: TGGAGGGAACAGCATGAGGAACAGCATTTGAGCCCAGCGTGTGTGGCCTCCATGTGCTGAATGCGTACTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000553894.6
ENST00000556776.1
ENST00000557413.6
CDS CCA 72 bp AAGTGGGGCATGTTCAGGCAGAACAACCAGCTTTTGTaGGAGGGAGTGCAGGCTTCAAATGCAGGTTCTGGG +
Preference number: 6 (lower is better)
Translates to: KWGMFRQNNQLL*EGVQASNAGSG
Trigger: CCCAGAACCTGCATTTGAAGCCTGCACTCCCTCCCACAAAAGCTGGTTGTTCTGCCTGAACATGCCCCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554834.1
CDS CAA 72 bp CCTCCCTGCTCCTCCTGTGGGAATCTCATTTACCCTTaGGGGTTTAGCACTTCTCCGTGGACCGGATGGATT +
Preference number: 6 (lower is better)
Translates to: PPCSSCGNLIYP*GFSTSPWTGWI
Trigger: AATCCATCCGGTCCACGGAGAAGTGCTAAACCCCAAAGGGTAAATGAGATTCCCACAGGAGGAGCAGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354625.6
ENST00000553894.6
ENST00000556776.1
ENST00000557413.6
CDS CAA 72 bp TGGCAGTTGAAGATCTCCTCTGCCCGCCGCAGGTATTaGGTAATTTTCAGCTTCACAGCCTCACGTCGCTCC +
Preference number: 6 (lower is better)
Translates to: WQLKISSARRRY*VIFSFTASRRS
Trigger: GGAGCGACGTGAGGCTGTGAAGCTGAAAATTACCAAATACCTGCGGCGGGCAGAGGAGATCTTCAACTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354625.6
ENST00000553894.6
ENST00000554900.1
ENST00000555009.5
ENST00000555647.5
ENST00000555834.5
ENST00000557383.1
ENST00000557413.6
CDS CAA 90 bp CCTGGGAACATTGGTGGTGGTTGGCCACCAACATATAGAAATGTGTaGCCCCTACTGCCCTCTGCACCCACATCAGACACTGAGCACGAA +
Preference number: 6 (lower is better)
Translates to: PGNIGGGWPPTYRNV*PLLPSAPTSDTEHE
Trigger: TTCGTGCTCAGTGTCTGATGTGGGTGCAGAGGGCAGTAGGGGCAACACATTTCTATATGTTGGTGGCCAACCACCACCAATGTTCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553646.1
ENST00000555834.5
ENST00000556848.5
CDS GCA 72 bp GTTGGCCACCAACATATAGAAATGTGTTGCCCCTACTaGCCTCTGCACCCACATCAGACACTGAGCACGAAG +
Preference number: 6 (lower is better)
Translates to: VGHQHIEMCCPY*PLHPHQTLSTK
Trigger: CTTCGTGCTCAGTGTCTGATGTGGGTGCAGAGGGCAGTAGGGGCAACACATTTCTATATGTTGGTGGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553646.1
ENST00000555834.5
ENST00000556848.5
CDS CAA 72 bp GGAAAGTGGGGCATGTTCAGGCAGAACAACCAGCTTTaGTGGGAGGGAGTGCAGGCTTCAAATGCAGGTTCT +
Preference number: 6 (lower is better)
Translates to: GKWGMFRQNNQL*WEGVQASNAGS
Trigger: AGAACCTGCATTTGAAGCCTGCACTCCCTCCCACAAAAGCTGGTTGTTCTGCCTGAACATGCCCCACTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554834.1
CDS CAA 90 bp CTGGCACACCACCGAGAGATGTCCAGCACTATCAGTGTCTGTGGTTaGGGTGGTGGGTTCACTAGTGTGAACACTGTTTTTAGGGAGACC +
Preference number: 6 (lower is better)
Translates to: LAHHREMSSTISVCG*GGGFTSVNTVFRET
Trigger: GGTCTCCCTAAAAACAGTGTTCACACTAGTGAACCCACCACCCAAACCACAGACACTGATAGTGCTGGACATCTCTCGGTGGTGTGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553646.1
CDS CCA 72 bp TTTGTGGGAGGGAGTGCAGGCTTCAAATGCAGGTTCTaGGTAGGAGTTTCCAAGAGCCCTGAGAAAGATCCA +
Preference number: 6 (lower is better)
Translates to: FVGGSAGFKCRF*VGVSKSPEKDP
Trigger: TGGATCTTTCTCAGGGCTCTTGGAAACTCCTACCCAGAACCTGCATTTGAAGCCTGCACTCCCTCCCACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554834.1
CDS CAA 72 bp CCTGGCCCACAGAACCCCCATTTTACCCTGGGAACATaGGTGGTGGTTGGCCACCAACATATAGAAATGTGT +
Preference number: 6 (lower is better)
Translates to: PGPQNPHFTLGT*VVVGHQHIEMC
Trigger: ACACATTTCTATATGTTGGTGGCCAACCACCACCAATGTTCCCAGGGTAAAATGGGGGTTCTGTGGGCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553646.1
ENST00000555834.5
ENST00000556848.5
CDS CCA 72 bp TGTGTATGTGTGTGTGTGCATGCATGTGTGTCCATCTaGAAAGTGGGGCATGTTCAGGCAGAACAACCAGCT +
Preference number: 6 (lower is better)
Translates to: CVCVCVHACVSI*KVGHVQAEQPA
Trigger: AGCTGGTTGTTCTGCCTGAACATGCCCCACTTTCCAGATGGACACACATGCATGCACACACACACATACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554834.1
CDS CAA 72 bp TGCTCAACGGGTCTGTTGACCCACCAGCTTGCTCCATaGGATGGTACTGAAAAAGGGATGGGACTTGAGTTT +
Preference number: 6 (lower is better)
Translates to: CSTGLLTHQLAP*DGTEKGMGLEF
Trigger: AAACTCAAGTCCCATCCCTTTTTCAGTACCATCCAATGGAGCAAGCTGGTGGGTCAACAGACCCGTTGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555910.5
CDS CAA 90 bp CTCCACCCTCTAGCCAAAGAGGGGGCAGTGTGTGTGCATGTGTGTTaGTGTGTATGTGTATGTGTATGTGTATGTGTGTGTGTGCATGCA +
Preference number: 6 (lower is better)
Translates to: LHPLAKEGAVCVHVC*CVCVCVCVCVCVHA
Trigger: TGCATGCACACACACACATACACATACACATACACATACACACAAACACACATGCACACACACTGCCCCCTCTTTGGCTAGAGGGTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554834.1
CDS CAA 72 bp CACCGAGAGATGTCCAGCACTATCAGTGTCTGTGGTTaGGGTGGTGGGTTCACTAGTGTGAACACTGTTTTT +
Preference number: 6 (lower is better)
Translates to: HREMSSTISVCG*GGGFTSVNTVF
Trigger: AAAAACAGTGTTCACACTAGTGAACCCACCACCCAAACCACAGACACTGATAGTGCTGGACATCTCTCGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553646.1
CDS CAA 72 bp ATGAGTCTCCAGAGATGTCCCCACCAGCTTGCTCCATaGGATGGTACTGAAAAAGGGATGGGACTTGAGTTT +
Preference number: 6 (lower is better)
Translates to: MSLQRCPHQLAP*DGTEKGMGLEF
Trigger: AAACTCAAGTCCCATCCCTTTTTCAGTACCATCCAATGGAGCAAGCTGGTGGGGACATCTCTGGAGACTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555009.5
CDS GCA 72 bp TGTGTGTATGTGTATGTGTATGTGTATGTGTGTGTGTaGATGCATGTGTGTCCATCTGGAAAGTGGGGCATG +
Preference number: 6 (lower is better)
Translates to: CVYVYVYVYVCV*MHVCPSGKWGM
Trigger: CATGCCCCACTTTCCAGATGGACACACATGCATGCACACACACACATACACATACACATACACATACACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554834.1
CDS GCA 72 bp TGTATGTGTATGTGTATGTGTATGTGTGTGTGTGCATaGATGTGTGTCCATCTGGAAAGTGGGGCATGTTCA +
Preference number: 6 (lower is better)
Translates to: CMCMCMCMCVCA*MCVHLESGACS
Trigger: TGAACATGCCCCACTTTCCAGATGGACACACATGCATGCACACACACACATACACATACACATACACATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554834.1