RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RPS6KB2 (Homo sapiens)

Ensembl gene IDs: ENSG00000175634

Ensembl transcript IDs: ENST00000312629.10, ENST00000420069.3, ENST00000524814.5, ENST00000524934.5, ENST00000525088.5, ENST00000525726.1, ENST00000525996.7, ENST00000528964.5, ENST00000530623.5, ENST00000531765.2, ENST00000556575.5

Found 309 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCCGGGGGCTACTGTTGAGGCGCCTGGGTGAGCGCAGCTTGGGCTaGAAGGAGAAGCCCTCCTTGATGCTGTCCAGGACAGACGGCGCC +
Preference number: 1 (lower is better)
Translates to: ARGLLLRRLGERSLG*KEKPSLMLSRTDGA
Trigger: GGCGCCGTCTGTCCTGGACAGCATCAAGGAGGGCTTCTCCTTCCAGCCCAAGCTGCGCTCACCCAGGCGCCTCAACAGTAGCCCCCGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
3UTR GCA 90 bp GCACTCTCGCTGAGGGCTGTGTCATCAGGACTGTCCACCGGCGTCTaGCGTGTGAAGCGGGTATCAAACTGGCTCACGTCCTCCTCTGAC +
Preference number: 1 (lower is better)
Translates to: ALSLRAVSSGLSTGV*RVKRVSNWLTSSSD
Trigger: GTCAGAGGAGGACGTGAGCCAGTTTGATACCCGCTTCACACGGCAGACGCCGGTGGACAGTCCTGATGACACAGCCCTCAGCGAGAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
3UTR TCA 90 bp AGCAGGCCGTATCTTCCAGGAAGATGCCCTCTCGCTCCAGATGCGTaGAGAGCTCGCCACCTGCCTCACAGAGCTGCCGTGGGGATTCAA +
Preference number: 1 (lower is better)
Translates to: SRPYLPGRCPLAPDA*RARHLPHRAAVGIQ
Trigger: TTGAATCCCCACGGCAGCTCTGTGAGGCAGGTGGCGAGCTCTTCACGCATCTGGAGCGAGAGGGCATCTTCCTGGAAGATACGGCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528964.5
ENST00000556575.5
3UTR GCA 90 bp CAGGAAGATGCCCTCTCGCTCCAGATGCGTGAAGAGCTCGCCACCTaGCTCACAGAGCTGCCGTGGGGATTCAATTCAATTCAGCAAACA +
Preference number: 1 (lower is better)
Translates to: QEDALSLQMREELAT*LTELPWGFNSIQQT
Trigger: TGTTTGCTGAATTGAATTGAATCCCCACGGCAGCTCTGTGAGGCAGGTGGCGAGCTCTTCACGCATCTGGAGCGAGAGGGCATCTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528964.5
ENST00000556575.5
3UTR CAA 90 bp ACGGGGGCCCGGGGGCTACTGTTGAGGCGCCTGGGTGAGCGCAGCTaGGGCTGGAAGGAGAAGCCCTCCTTGATGCTGTCCAGGACAGAC +
Preference number: 2 (lower is better)
Translates to: TGARGLLLRRLGERS*GWKEKPSLMLSRTD
Trigger: GTCTGTCCTGGACAGCATCAAGGAGGGCTTCTCCTTCCAGCCCAAGCTGCGCTCACCCAGGCGCCTCAACAGTAGCCCCCGGGCCCCCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
3UTR-3UTR TCA 90 bp CTCACAGCCGCAGGGACAGGGCTCAAGGGCTACCCTCACCCCCACCCGGCTTCCGGTTGGCACTCTCGCTaGGGGCTGTGTCATCAGGAC +
Preference number: 2 (lower is better)
Translates to: LTAAGTGLKGYPHPHPASGWHSR*GLCHQD
Trigger: GTCCTGATGACACAGCCCTCAGCGAGAGTGCCAACC...GGAAGCCGGGTGGGGGTGAGGGTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528964.5
3UTR-3UTR GCA 90 bp GGCTCAAGGGCTACCCTCACCCCCACCCGGCTTCCTAGCGCCCTGGACGCCCACTTTCTTCCGGTTCTCTaGGGTGAAGGGCGGCGATCC +
Preference number: 2 (lower is better)
Translates to: GSRATLTPTRLPSALDAHFLPVL*GEGRRS
Trigger: GGATCGCCGCCCTTCACCGCAGAGAACCGGAAGAAA...GTGGGCGTCCAGGGCGCTAGGAAGCCGGGTGGGGGTGAGGGTAGCCCTTGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528964.5
3UTR-3UTR CCA 90 bp CCACCCGGCTTCCTAGCGCCCTGGACGCCCACGGCCCCTCTTGGACTTCTTGGTGAGCGCAGCTTGGGCTaGAAGGAGAAGCCCTCCTTG +
Preference number: 2 (lower is better)
Translates to: PPGFLAPWTPTAPLGLLGERSLG*KEKPSL
Trigger: CAAGGAGGGCTTCTCCTTCCAGCCCAAGCTGCGCTC...ACCAAGAAGTCCAAGAGGGGCCGTGGGCGTCCAGGGCGCTAGGAAGCCGGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528964.5
3UTR CAA 90 bp AGGCGCCTGGGTGAGCGCAGCTTGGGCTGGAAGGAGAAGCCCTCCTaGATGCTGTCCAGGACAGACGGCGCCACGTATGTGAAGCCCAGG +
Preference number: 2 (lower is better)
Translates to: RRLGERSLGWKEKPS*MLSRTDGATYVKPR
Trigger: CCTGGGCTTCACATACGTGGCGCCGTCTGTCCTGGACAGCATCAAGGAGGGCTTCTCCTTCCAGCCCAAGCTGCGCTCACCCAGGCGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
3UTR-3UTR GCA 90 bp TTCTCTGCGGTGAAGGGCGGCGATCCAGTGAGCATGTCGTACATCAGGGCCCCCACTGGCCCAGGGTCCTaGTGCTCTCACAGCCGCAGG +
Preference number: 2 (lower is better)
Translates to: FSAVKGGDPVSMSYIRAPTGPGS*CSHSRR
Trigger: CCTGCGGCTGTGAGAGCAGCAGGACCCTGGGCCAGT...GGGGGCCCTGATGTACGACATGCTCACTGGATCGCCGCCCTTCACCGCAGAGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528964.5
3UTR-3UTR GCA 90 bp GGCTGGAAGGAGAAGCCCTCCTTGATGCTGTCCAGGACAGACGGCGCCACGTATCGGTGCCTGGCCCTGTaGTGGGTGAAGCTGGGGACA +
Preference number: 2 (lower is better)
Translates to: GWKEKPSLMLSRTDGATYRCLAL*WVKLGT
Trigger: TGTCCCCAGCTTCACCCAGCACAGGGCCAGGCACCG...ATACGTGGCGCCGTCTGTCCTGGACAGCATCAAGGAGGGCTTCTCCTTCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528964.5
3UTR-3UTR GCA 90 bp ATGCTGTCCAGGACAGACGGCGCCACGTATGTGAAGCCCAGGAAGGCCTGGTTGCCCGGTTGTGGCCACTaGGCACCAGAATCTCAGGGG +
Preference number: 2 (lower is better)
Translates to: MLSRTDGATYVKPRKAWLPGCGH*APESQG
Trigger: CCCCTGAGATTCTGGTGCGCAGTGGCCACAACCGGG...CAACCAGGCCTTCCTGGGCTTCACATACGTGGCGCCGTCTGTCCTGGACAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
3UTR-3UTR CCA 90 bp GCGCAGCTTGGGCTGGAAGGAGAAGCCCTCCTTGATGCTGTCCAGGACAGACGGTCCACAGCCCGGTTGTaGCCACTGCGCACCAGAATC +
Preference number: 2 (lower is better)
Translates to: AQLGLEGEALLDAVQDRRSTARL*PLRTRI
Trigger: GATTCTGGTGCGCAGTGGCCACAACCGGGCTGTGGA...CCGTCTGTCCTGGACAGCATCAAGGAGGGCTTCTCCTTCCAGCCCAAGCTGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
3UTR-3UTR CCA 90 bp CACGTATGTGAAGCCCAGGAAGGCCTGGTTGGCACTCTCGCTGAGGGCTGTGTCATCAGCAGCATCCCCTaGGCCACCCCCAATCCGCTG +
Preference number: 2 (lower is better)
Translates to: HVCEAQEGLVGTLAEGCVISSIP*ATPNPL
Trigger: CAGCGGATTGGGGGTGGCCCAGGGGATGCTGCTGAT...GACACAGCCCTCAGCGAGAGTGCCAACCAGGCCTTCCTGGGCTTCACATACGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
3UTR-3UTR TCA 90 bp GTCCACACGCCAGGCCAGAAGGTCGTCCCAATTCATGTGCCGGAAAAAGGGATGGGCCCAGGGCCAGCGTaGTCTCAGCCAGGTAGAAGC +
Preference number: 2 (lower is better)
Translates to: VHTPGQKVVPIHVPEKGMGPGPA*SQPGRS
Trigger: GCTTCTACCTGGCTGAGATCACGCTGGCCCTGGGCC...CATCCCTTTTTCCGGCACATGAATTGGGACGACCTTCTGGCCTGGCGTGTGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528964.5
3UTR-3UTR TCA 90 bp GAGAAGCCCTCCTTGATGCTGTCCAGGACAGACGGCGCCACGTATGTGAAGCCCAGGGCGGCGATCCAGTaGGCATGTCGTACATCAGGG +
Preference number: 2 (lower is better)
Translates to: EKPSLMLSRTDGATYVKPRAAIQ*ACRTSG
Trigger: CCCTGATGTACGACATGCTCACTGGATCGCCGCCCT...GGGCTTCACATACGTGGCGCCGTCTGTCCTGGACAGCATCAAGGAGGGCTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
3UTR-3UTR GCA 90 bp CCCCCAATCCGCTGGCTGGGATTCCGTTTCAGAAACTTTTTGACAAGGTCCCGGGGCCCAGGGTCCTGCTaGTCTCACAGCCGCAGGGAC +
Preference number: 2 (lower is better)
Translates to: PPIRWLGFRFRNFLTRSRGPGSC*SHSRRD
Trigger: GTCCCTGCGGCTGTGAGAGCAGCAGGACCCTGGGCC...CCGGGACCTTGTCAAAAAGTTTCTGAAACGGAATCCCAGCCAGCGGATTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000528964.5
3UTR-3UTR GCA 90 bp ATTCAGCCCTTTAATCTTCCACGGGAGCAGTTGAGCGCGGGGCGTGGCGGGCGGATTCAGGGGCACAGCTaGCCCAGCAGACACACACTT +
Preference number: 2 (lower is better)
Translates to: IQPFNLPREQLSAGRGGRIQGHS*PSRHTL
Trigger: AAGTGTGTGTCTGCTGGGGCAGCTGTGCCCCTGAAT...CCGCCCGCCACGCCCCGCGCTCAACTGCTCCCGTGGAAGATTAAAGGGCTGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312629.10
3UTR-3UTR GCA 90 bp AAGAGCTCGCCACCTGCCTCACAGAGCTGCCGTGGGGATTCAATTCAATTCAGCCCGACGCCTACTCGGTaGCTGGCCCTGTGCTGGGTG +
Preference number: 2 (lower is better)
Translates to: KSSPPASQSCRGDSIQFSPTPTR*LALCWV
Trigger: CACCCAGCACAGGGCCAGGCACCGAGTAGGCGTCGG...GCTGAATTGAATTGAATCCCCACGGCAGCTCTGTGAGGCAGGTGGCGAGCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528964.5
ENST00000556575.5
3UTR-3UTR TCA 90 bp AAGTCGGTCAGTTTGATGTGGCCCTGGCTGCTGAGCATGATGTTCTCGGGCTTGGGCCCAGGGCCAGCGTaGTCTCAGCCAGGTAGAAGC +
Preference number: 2 (lower is better)
Translates to: KSVSLMWPWLLSMMFSGLGPGPA*SQPGRS
Trigger: GCTTCTACCTGGCTGAGATCACGCTGGCCCTGGGCC...CAAGCCCGAGAACATCATGCTCAGCAGCCAGGGCCACATCAAACTGACCGACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528964.5
ENST00000556575.5
3UTR-3UTR TCA 90 bp GTATCTTCCAGGAAGATGCCCTCTCGCTCCAGATGCGTGAAGAGCTCGCCACCTAAGCTGGGGACAGGATaGAGAGACCCAGCCACTGCC +
Preference number: 2 (lower is better)
Translates to: VSSRKMPSRSRCVKSSPPKLGTG*RDPATA
Trigger: GGCAGTGGCTGGGTCTCTTCATCCTGTCCCCAGCTT...AGGTGGCGAGCTCTTCACGCATCTGGAGCGAGAGGGCATCTTCCTGGAAGATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528964.5
ENST00000556575.5
3UTR-3UTR TCA 90 bp AAGAGCTCGCCACCTGCCTCACAGAGCTGCCGTGGGGATTCAATTCAATTCAGCAAGCTGGGGACAGGATaGAGAGACCCAGCCACTGCC +
Preference number: 2 (lower is better)
Translates to: KSSPPASQSCRGDSIQFSKLGTG*RDPATA
Trigger: GGCAGTGGCTGGGTCTCTTCATCCTGTCCCCAGCTT...GCTGAATTGAATTGAATCCCCACGGCAGCTCTGTGAGGCAGGTGGCGAGCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528964.5
ENST00000556575.5
3UTR-3UTR GCA 90 bp AAAGTCGGTCAGTTTGATGTGGCCCTGGCTGCTGAGCATGATGTTCTCGGGCTTGAAGAGCTCGCCACCTaGCTCACAGAGCTGCCGTGG +
Preference number: 2 (lower is better)
Translates to: KVGQFDVALAAEHDVLGLEELAT*LTELPW
Trigger: CCACGGCAGCTCTGTGAGGCAGGTGGCGAGCTCTTC...AAGCCCGAGAACATCATGCTCAGCAGCCAGGGCCACATCAAACTGACCGACTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528964.5
ENST00000556575.5
3UTR-3UTR CCA 90 bp CTGTCCAGGACAGACGGCGCCACGTATGTGAAGCCCAGGAAGGCCTGGTTGGCAAGTTTGATGTGGCCCTaGCTGCTGAGCATGATGTTC +
Preference number: 2 (lower is better)
Translates to: LSRTDGATYVKPRKAWLASLMWP*LLSMMF
Trigger: GAACATCATGCTCAGCAGCCAGGGCCACATCAAACT...TGCCAACCAGGCCTTCCTGGGCTTCACATACGTGGCGCCGTCTGTCCTGGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528964.5
3UTR-3UTR GCA 90 bp CCCCCAATCCGCTGGCTGGGATTCCGTTTCAGAAACTTTTTGACAAGGTCCCGGATTCAGGGGCACAGCTaGCCCAGCAGACACACACTT +
Preference number: 2 (lower is better)
Translates to: PPIRWLGFRFRNFLTRSRIQGHS*PSRHTL
Trigger: AAGTGTGTGTCTGCTGGGGCAGCTGTGCCCCTGAAT...CCGGGACCTTGTCAAAAAGTTTCTGAAACGGAATCCCAGCCAGCGGATTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000528964.5
3UTR-3UTR GCA 90 bp AAGTCGGTCAGTTTGATGTGGCCCTGGCTGCTGAGCATGATGTTCTCGGGCTTGCCTGCCTCACAGAGCTaGCGTGGGGATTCAATTCAA +
Preference number: 2 (lower is better)
Translates to: KSVSLMWPWLLSMMFSGLPASQS*RGDSIQ
Trigger: TTGAATTGAATCCCCACGGCAGCTCTGTGAGGCAGG...CAAGCCCGAGAACATCATGCTCAGCAGCCAGGGCCACATCAAACTGACCGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528964.5
ENST00000556575.5
3UTR-3UTR CCA 90 bp TCCACACGCCAGGCCAGAAGGTCGTCCCAATTCATGTGCCGGAAAAAGGGATGTCTCACAGAGCTGCCGTaGGGATTCAATTCAATTCAG +
Preference number: 2 (lower is better)
Translates to: STRQARRSSQFMCRKKGCLTELP*GFNSIQ
Trigger: CTGAATTGAATTGAATCCCCACGGCAGCTCTGTGAG...ACATCCCTTTTTCCGGCACATGAATTGGGACGACCTTCTGGCCTGGCGTGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528964.5
3UTR TCA 72 bp GACGGGGGCCCGGGGGCTACTGTTGAGGCGCCTGGGTaGGCGCAGCTTGGGCTGGAAGGAGAAGCCCTCCTT +
Preference number: 3 (lower is better)
Translates to: DGGPGATVEAPG*AQLGLEGEALL
Trigger: AAGGAGGGCTTCTCCTTCCAGCCCAAGCTGCGCTCACCCAGGCGCCTCAACAGTAGCCCCCGGGCCCCCGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
3UTR-3UTR CAA 90 bp GGCTCAAGGGCTACCCTCACCCCCACCCGGCTTCCTAGCGCCCTGGACGCCCACCCAAAGTCGGTCAGTTaGATGTGGCCCTGGCTGCTG +
Preference number: 3 (lower is better)
Translates to: GSRATLTPTRLPSALDAHPKSVS*MWPWLL
Trigger: CAGCAGCCAGGGCCACATCAAACTGACCGACTTTGG...GTGGGCGTCCAGGGCGCTAGGAAGCCGGGTGGGGGTGAGGGTAGCCCTTGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528964.5
3UTR GCA 72 bp ACACACCCCCAGGTCTCTGGAACTGGCCCAGGGTCCTaGTGCTCTCACAGCCGCAGGGACAGGGCTCAAGGG +
Preference number: 3 (lower is better)
Translates to: THPQVSGTGPGS*CSHSRRDRAQG
Trigger: CCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGCAGCAGGACCCTGGGCCAGTTCCAGAGACCTGGGGGTGTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
3UTR GCA 72 bp GGGCGGCCCTCCGTGCCCATGATTCAGGGGCACAGCTaGCCCAGCAGACACACACTTTCATACGCACTCACA +
Preference number: 3 (lower is better)
Translates to: GRPSVPMIQGHS*PSRHTLSYALT
Trigger: TGTGAGTGCGTATGAAAGTGTGTGTCTGCTGGGGCAGCTGTGCCCCTGAATCATGGGCACGGAGGGCCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312629.10
3UTR GCA 72 bp GCCGTATCTTCCAGGAAGATGCCCTCTCGCTCCAGATaGGTGAAGAGCTCGCCACCTGCCTCACAGAGCTGC +
Preference number: 3 (lower is better)
Translates to: AVSSRKMPSRSR*VKSSPPASQSC
Trigger: GCAGCTCTGTGAGGCAGGTGGCGAGCTCTTCACGCATCTGGAGCGAGAGGGCATCTTCCTGGAAGATACGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528964.5
ENST00000556575.5
3UTR TCA 72 bp TATCTTCCAGGAAGATGCCCTCTCGCTCCAGATGCGTaGAGAGCTCGCCACCTGCCTCACAGAGCTGCCGTG +
Preference number: 3 (lower is better)
Translates to: YLPGRCPLAPDA*RARHLPHRAAV
Trigger: CACGGCAGCTCTGTGAGGCAGGTGGCGAGCTCTTCACGCATCTGGAGCGAGAGGGCATCTTCCTGGAAGATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528964.5
ENST00000556575.5
3UTR TCA 72 bp CTGTGTCATCAGGACTGTCCACCGGCGTCTGCCGTGTaGAGCGGGTATCAAACTGGCTCACGTCCTCCTCTG +
Preference number: 3 (lower is better)
Translates to: LCHQDCPPASAV*SGYQTGSRPPL
Trigger: CAGAGGAGGACGTGAGCCAGTTTGATACCCGCTTCACACGGCAGACGCCGGTGGACAGTCCTGATGACACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
3UTR GCA 72 bp GCCCTCTCGCTCCAGATGCGTGAAGAGCTCGCCACCTaGCTCACAGAGCTGCCGTGGGGATTCAATTCAATT +
Preference number: 3 (lower is better)
Translates to: ALSLQMREELAT*LTELPWGFNSI
Trigger: AATTGAATTGAATCCCCACGGCAGCTCTGTGAGGCAGGTGGCGAGCTCTTCACGCATCTGGAGCGAGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528964.5
ENST00000556575.5
3UTR GCA 72 bp TCCACACGCCAGGCCAGAAGGTCGTCCCAATTCATGTaGCGGAAAAAGGGATGTCTCTGCACATCAGCAGCA +
Preference number: 3 (lower is better)
Translates to: STRQARRSSQFM*RKKGCLCTSAA
Trigger: TGCTGCTGATGTGCAGAGACATCCCTTTTTCCGGCACATGAATTGGGACGACCTTCTGGCCTGGCGTGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR TCA 90 bp GTTGAGCGCGGGGCGTGGCGGGCGGCCCTCCGTGCCCATGATTCAGGGGCACAGCCCGGGGGCTACTGTTaGGGCGCCTGGGTGAGCGCA +
Preference number: 4 (lower is better)
Translates to: VERGAWRAALRAHDSGAQPGGYC*GAWVSA
Trigger: TGCGCTCACCCAGGCGCCTCAACAGTAGCCCCCGGG...CTGTGCCCCTGAATCATGGGCACGGAGGGCCGCCCGCCACGCCCCGCGCTCAAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000312629.10
CDS-3UTR TCA 90 bp GCTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACCCTCACCCCCACCCGGCTATGCGTCCGCGGGGCTaGGCTCTGGCTCGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: ALTAAGTGLKGYPHPHPAMRPRG*ALARPR
Trigger: GCGAGGGCGAGCCAGAGCTCAGCCCCGCGGACGCAT...AGCCGGGTGGGGGTGAGGGTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS-3UTR TCA 90 bp GTTGAGCGCGGGGCGTGGCGGGCGGCCCTCCGTGCCCATGATTCAGGGGCACAGGGCCCAGGGCCAGCGTaGTCTCAGCCAGGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: VERGAWRAALRAHDSGAQGPGPA*SQPGRS
Trigger: GCTTCTACCTGGCTGAGATCACGCTGGCCCTGGGCC...CTGTGCCCCTGAATCATGGGCACGGAGGGCCGCCCGCCACGCCCCGCGCTCAAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312629.10
CDS-3UTR TCA 90 bp TCTTCCACGGGAGCAGTTGAGCGCGGGGCGTGGCGGGCGGCCCTCCGTGCCCATGTGCCGCAGAAGGTGTaGGTGACGGCGCCCTCATGG +
Preference number: 4 (lower is better)
Translates to: SSTGAVERGAWRAALRAHVPQKV*VTAPSW
Trigger: CCATGAGGGCGCCGTCACTCACACCTTCTGCGGCAC...ATGGGCACGGAGGGCCGCCCGCCACGCCCCGCGCTCAACTGCTCCCGTGGAAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312629.10
CDS-3UTR TCA 90 bp CTGCTGCTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACCCTCACCCCCACCTTCCACGGGAGCAGTTaGGCGCGGGGCGTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: LLLSQPQGQGSRATLTPTFHGSS*ARGVAG
Trigger: GCCCGCCACGCCCCGCGCTCAACTGCTCCCGTGGAA...GGTGGGGGTGAGGGTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGCAGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312629.10
CDS-3UTR TCA 90 bp TCTTCCACGGGAGCAGTTGAGCGCGGGGCGTGGCGGGCGGCCCTCCGTGCCCATCCGGCGTCTGCCGTGTaGAGCGGGTATCAAACTGGC +
Preference number: 4 (lower is better)
Translates to: SSTGAVERGAWRAALRAHPASAV*SGYQTG
Trigger: GCCAGTTTGATACCCGCTTCACACGGCAGACGCCGG...ATGGGCACGGAGGGCCGCCCGCCACGCCCCGCGCTCAACTGCTCCCGTGGAAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312629.10
CDS-3UTR CCA 90 bp CTGGCCCAGGGTCCTGCTGCTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACTGGGCTCCGGCAGGCTaGGGCTGGGCCGAAACCCCT +
Preference number: 4 (lower is better)
Translates to: LAQGPAALTAAGTGLKGYWAPAG*GWAETP
Trigger: AGGGGTTTCGGCCCAGCCCCAGCCTGCCGGAGCCCA...GTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGCAGCAGGACCCTGGGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS-3UTR TCA 90 bp GTTGAGCGCGGGGCGTGGCGGGCGGCCCTCCGTGCCCATGATTCAGGGGCACAGGGTTGGCACTCTCGCTaGGGGCTGTGTCATCAGGAC +
Preference number: 4 (lower is better)
Translates to: VERGAWRAALRAHDSGAQGWHSR*GLCHQD
Trigger: GTCCTGATGACACAGCCCTCAGCGAGAGTGCCAACC...CTGTGCCCCTGAATCATGGGCACGGAGGGCCGCCCGCCACGCCCCGCGCTCAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312629.10
CDS-3UTR TCA 90 bp TGCTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACCCTCACCCCCACCCGGCGTTGAGGCGCCTGGGTaGGCGCAGCTTGGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: CSHSRRDRAQGLPSPPPGVEAPG*AQLGLE
Trigger: TTCCAGCCCAAGCTGCGCTCACCCAGGCGCCTCAAC...GCCGGGTGGGGGTGAGGGTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS-3UTR GCA 90 bp GCGTGGCGGGCGGCCCTCCGTGCCCATGATTCAGGGGCACAGCTGCCCCAGCAGCCCTCTCGCTCCAGATaGGTGAAGAGCTCGCCACCA +
Preference number: 4 (lower is better)
Translates to: AWRAALRAHDSGAQLPQQPSRSR*VKSSPP
Trigger: TGGTGGCGAGCTCTTCACGCATCTGGAGCGAGAGGG...CTGCTGGGGCAGCTGTGCCCCTGAATCATGGGCACGGAGGGCCGCCCGCCACGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312629.10
CDS-3UTR GCA 90 bp GCCCAGGGTCCTGCTGCTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACCCTGGCCCAGGGTCCTGCTaGTCTCACAGCCGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: AQGPAALTAAGTGLKGYPGPGSC*SHSRRD
Trigger: GTCCCTGCGGCTGTGAGAGCAGCAGGACCCTGGGCC...AGGGTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGCAGCAGGACCCTGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS-3UTR CCA 90 bp TCTTCCACGGGAGCAGTTGAGCGCGGGGCGTGGCGGGCGGCCCTCCGTGCCCATTGGGTGAGCGCAGCTTaGGCTGGAAGGAGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: SSTGAVERGAWRAALRAHWVSAA*AGRRSP
Trigger: AGGGCTTCTCCTTCCAGCCCAAGCTGCGCTCACCCA...ATGGGCACGGAGGGCCGCCCGCCACGCCCCGCGCTCAACTGCTCCCGTGGAAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312629.10
CDS-3UTR CCA 90 bp CCTGCTGCTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACCCTCACCCCCACGTAGAGGTAGCTCCGTaGGCTCCGGCAGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: PAALTAAGTGLKGYPHPHVEVAP*APAGWG
Trigger: GCCCCAGCCTGCCGGAGCCCACGGAGCTACCTCTAC...GTGGGGGTGAGGGTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGCAGCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS-3UTR TCA 90 bp AGCTTGGGCTGGAAGGAGAAGCCCTCCTTGATGCTGTCCAGGACAGACGGCGCCATGCGTCCGCGGGGCTaGGCTCTGGCTCGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: SLGWKEKPSLMLSRTDGAMRPRG*ALARPR
Trigger: GCGAGGGCGAGCCAGAGCTCAGCCCCGCGGACGCAT...GGCGCCGTCTGTCCTGGACAGCATCAAGGAGGGCTTCTCCTTCCAGCCCAAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528964.5
CDS-3UTR TCA 90 bp CCACCCGGCTTCCTAGCGCCCTGGACGCCCACGGCCCCTCTTGGACTTCTTGGTGTGCCGCAGAAGGTGTaGGTGACGGCGCCCTCATGG +
Preference number: 4 (lower is better)
Translates to: PPGFLAPWTPTAPLGLLGVPQKV*VTAPSW
Trigger: CCATGAGGGCGCCGTCACTCACACCTTCTGCGGCAC...ACCAAGAAGTCCAAGAGGGGCCGTGGGCGTCCAGGGCGCTAGGAAGCCGGGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528964.5
CDS-3UTR GCA 90 bp TGGCGGGCGGCCCTCCGTGCCCATGATTCAGGGGCACAGCTGCCCCAGCAGACACGCCCTCGCCCTCGCTaGCTTCCTCCGTCTCCAAAT +
Preference number: 4 (lower is better)
Translates to: WRAALRAHDSGAQLPQQTRPRPR*LPPSPN
Trigger: ATTTGGAGACGGAGGAAGGCAGCGAGGGCGAGGGCG...TGTCTGCTGGGGCAGCTGTGCCCCTGAATCATGGGCACGGAGGGCCGCCCGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312629.10
CDS-3UTR GCA 90 bp TGCTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACCCTCACCCCCACCCGGCAGCAGTGGGGCCCGATaGGCTCTGGGCCAACGTTCA +
Preference number: 4 (lower is better)
Translates to: CSHSRRDRAQGLPSPPPGSSGAR*ALGQRS
Trigger: TGAACGTTGGCCCAGAGCGCATCGGGCCCCACTGCT...GCCGGGTGGGGGTGAGGGTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS-3UTR GCA 90 bp CTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACCCTCACCCCCACCCGGCTTACTGGCCCAGGGTCCTaGTGCTCTCACAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: LSQPQGQGSRATLTPTRLTGPGS*CSHSRR
Trigger: CCTGCGGCTGTGAGAGCAGCAGGACCCTGGGCCAGT...AAGCCGGGTGGGGGTGAGGGTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS-3UTR CCA 90 bp TGCTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACCCTCACCCCCACCCGGCAGCAGCTCAAAGCAGTaGGGCCCGATGCGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: CSHSRRDRAQGLPSPPPGSSSKQ*GPMRSG
Trigger: CCCAGAGCGCATCGGGCCCCACTGCTTTGAGCTGCT...GCCGGGTGGGGGTGAGGGTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS-3UTR CCA 90 bp CTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACCCTCACCCCCACCCGGCTTCCCTGGGAGTGGAGATaGCCCAGGGCCAGCGTGATC +
Preference number: 4 (lower is better)
Translates to: LSQPQGQGSRATLTPTRLPWEWR*PRASVI
Trigger: GATCACGCTGGCCCTGGGCCATCTCCACTCCCAGGG...AAGCCGGGTGGGGGTGAGGGTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS-3UTR CCA 90 bp TGCTGCTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACCCTCACCCCCACCCCCCTGGGAGTGGAGATaGCCCAGGGCCAGCGTGATC +
Preference number: 4 (lower is better)
Translates to: CCSHSRRDRAQGLPSPPPPWEWR*PRASVI
Trigger: GATCACGCTGGCCCTGGGCCATCTCCACTCCCAGGG...GGGTGGGGGTGAGGGTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGCAGCA
68% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS-3UTR CCA 90 bp GGCGGGCGGCCCTCCGTGCCCATGATTCAGGGGCACAGCTGCCCCAGCAGACACTCCACAGCCCGGTTGTaGCCACTGCGCACCAGAATC +
Preference number: 4 (lower is better)
Translates to: GGRPSVPMIQGHSCPSRHSTARL*PLRTRI
Trigger: GATTCTGGTGCGCAGTGGCCACAACCGGGCTGTGGA...GTGTCTGCTGGGGCAGCTGTGCCCCTGAATCATGGGCACGGAGGGCCGCCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312629.10
CDS-3UTR CCA 90 bp GGCGGGCGGCCCTCCGTGCCCATGATTCAGGGGCACAGCTGCCCCAGCAGACACAAGCCCAGGAAGGCCTaGTTGGCACTCTCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: GGRPSVPMIQGHSCPSRHKPRKA*LALSLR
Trigger: CCTCAGCGAGAGTGCCAACCAGGCCTTCCTGGGCTT...GTGTCTGCTGGGGCAGCTGTGCCCCTGAATCATGGGCACGGAGGGCCGCCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312629.10
CDS-3UTR CCA 90 bp TGGCGGGCGGCCCTCCGTGCCCATGATTCAGGGGCACAGCTGCCCCAGCAGACAGCCCACGGCCCCTCTTaGACTTCTTGGTCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: WRAALRAHDSGAQLPQQTAHGPS*TSWSLR
Trigger: CCTCAGGGACCAAGAAGTCCAAGAGGGGCCGTGGGC...TGTCTGCTGGGGCAGCTGTGCCCCTGAATCATGGGCACGGAGGGCCGCCCGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312629.10
CDS-3UTR CCA 90 bp ACTGGCCCAGGGTCCTGCTGCTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTAGGCTTCCTAGCGCCCTaGACGCCCACGGCCCCTCTT +
Preference number: 4 (lower is better)
Translates to: TGPGSCCSHSRRDRAQGLGFLAP*TPTAPL
Trigger: AAGAGGGGCCGTGGGCGTCCAGGGCGCTAGGAAGCC...TAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGCAGCAGGACCCTGGGCCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS-3UTR TCA 90 bp CAGCCCTTTAATCTTCCACGGGAGCAGTTGAGCGCGGGGCGTGGCGGGCGGCCCAGGGCGGCGATCCAGTaGGCATGTCGTACATCAGGG +
Preference number: 4 (lower is better)
Translates to: QPFNLPREQLSAGRGGRPRAAIQ*ACRTSG
Trigger: CCCTGATGTACGACATGCTCACTGGATCGCCGCCCT...GGGCCGCCCGCCACGCCCCGCGCTCAACTGCTCCCGTGGAAGATTAAAGGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312629.10
CDS-3UTR TCA 90 bp GCCCAGGGTCCTGCTGCTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACCCTCCGGCGTCTGCCGTGTaGAGCGGGTATCAAACTGGC +
Preference number: 4 (lower is better)
Translates to: AQGPAALTAAGTGLKGYPPASAV*SGYQTG
Trigger: GCCAGTTTGATACCCGCTTCACACGGCAGACGCCGG...AGGGTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGCAGCAGGACCCTGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS-3UTR TCA 90 bp TGCTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACCCTCACCCCCACCCGGCAAGCTGGGGACAGGATaGAGAGACCCAGCCACTGCC +
Preference number: 4 (lower is better)
Translates to: CSHSRRDRAQGLPSPPPGKLGTG*RDPATA
Trigger: GGCAGTGGCTGGGTCTCTTCATCCTGTCCCCAGCTT...GCCGGGTGGGGGTGAGGGTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528964.5
CDS-3UTR TCA 90 bp CCACCCGGCTTCCTAGCGCCCTGGACGCCCACGGCCCCTCTTGGACTTCTTGGTCTCGCTCCAGATGCGTaGAGAGCTCGCCACCTGCCT +
Preference number: 4 (lower is better)
Translates to: PPGFLAPWTPTAPLGLLGLAPDA*RARHLP
Trigger: AGGCAGGTGGCGAGCTCTTCACGCATCTGGAGCGAG...ACCAAGAAGTCCAAGAGGGGCCGTGGGCGTCCAGGGCGCTAGGAAGCCGGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528964.5
CDS-3UTR GCA 90 bp TGCTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACCCTCACCCCCACCCGGCCTGTCCACCGGCGTCTaGCGTGTGAAGCGGGTATCA +
Preference number: 4 (lower is better)
Translates to: CSHSRRDRAQGLPSPPPGLSTGV*RVKRVS
Trigger: TGATACCCGCTTCACACGGCAGACGCCGGTGGACAG...GCCGGGTGGGGGTGAGGGTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS-3UTR CCA 90 bp GGAGCAGTTGAGCGCGGGGCGTGGCGGGCGGCCCTCCGTGCCCATGATTCAGGGGTGACGGCGCCCTCATaGATAGACTCCTTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: GAVERGAWRAALRAHDSGVTAPS*IDSLQS
Trigger: ACTCTGCAAGGAGTCTATCCATGAGGGCGCCGTCAC...CCCTGAATCATGGGCACGGAGGGCCGCCCGCCACGCCCCGCGCTCAACTGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312629.10
CDS-3UTR CCA 90 bp CTGCTGCTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACCCTCACCCCCACCATCAGCAGCATCCCCTaGGCCACCCCCAATCCGCTG +
Preference number: 4 (lower is better)
Translates to: LLLSQPQGQGSRATLTPTISSIP*ATPNPL
Trigger: CAGCGGATTGGGGGTGGCCCAGGGGATGCTGCTGAT...GGTGGGGGTGAGGGTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGCAGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS-3UTR CCA 90 bp GCTGCTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACCCTCACCCCCACCCGGAGCGCAGCTTGGGCTaGAAGGAGAAGCCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: AALTAAGTGLKGYPHPHPERSLG*KEKPSL
Trigger: CAAGGAGGGCTTCTCCTTCCAGCCCAAGCTGCGCTC...CGGGTGGGGGTGAGGGTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS-3UTR CCA 90 bp TGCTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACCCTCACCCCCACCCGGCGAGCGCAGCTTGGGCTaGAAGGAGAAGCCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: CSHSRRDRAQGLPSPPPGERSLG*KEKPSL
Trigger: CAAGGAGGGCTTCTCCTTCCAGCCCAAGCTGCGCTC...GCCGGGTGGGGGTGAGGGTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS-3UTR TCA 90 bp GCTGCTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACCCTCACCCCCACCCGAGGAGAAGCCCTCCTTaGTGCTGTCCAGGACAGACG +
Preference number: 4 (lower is better)
Translates to: AALTAAGTGLKGYPHPHPRRSPP*CCPGQT
Trigger: CGTCTGTCCTGGACAGCATCAAGGAGGGCTTCTCCT...CGGGTGGGGGTGAGGGTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS-3UTR TCA 90 bp ATGCTGTCCAGGACAGACGGCGCCACGTATGTGAAGCCCAGGAAGGCCTGGTTGCCCGGGGGCTACTGTTaGGGCGCCTGGGTGAGCGCA +
Preference number: 4 (lower is better)
Translates to: MLSRTDGATYVKPRKAWLPGGYC*GAWVSA
Trigger: TGCGCTCACCCAGGCGCCTCAACAGTAGCCCCCGGG...CAACCAGGCCTTCCTGGGCTTCACATACGTGGCGCCGTCTGTCCTGGACAGCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR TCA 90 bp AGGAAGATGCCCTCTCGCTCCAGATGCGTGAAGAGCTCGCCACCTGCCTCACAGCCCGGGGGCTACTGTTaGGGCGCCTGGGTGAGCGCA +
Preference number: 4 (lower is better)
Translates to: RKMPSRSRCVKSSPPASQPGGYC*GAWVSA
Trigger: TGCGCTCACCCAGGCGCCTCAACAGTAGCCCCCGGG...CTGTGAGGCAGGTGGCGAGCTCTTCACGCATCTGGAGCGAGAGGGCATCTTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528964.5
CDS-3UTR GCA 90 bp CAGCCCTTTAATCTTCCACGGGAGCAGTTGAGCGCGGGGCGTGGCGGGCGGCCCCTCAGCCCGTGTGTGTaGTGTGTCCTTGGCATTGCG +
Preference number: 4 (lower is better)
Translates to: QPFNLPREQLSAGRGGRPLSPCV*CVLGIA
Trigger: CGCAATGCCAAGGACACAGCACACACACGGGCTGAG...GGGCCGCCCGCCACGCCCCGCGCTCAACTGCTCCCGTGGAAGATTAAAGGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312629.10
CDS-3UTR GCA 90 bp CAGGGTCCTGCTGCTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACCCTCACCCCGGTTGTGGCCACTaGGCACCAGAATCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: QGPAALTAAGTGLKGYPHPGCGH*APESQG
Trigger: CCCCTGAGATTCTGGTGCGCAGTGGCCACAACCGGG...GTGAGGGTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGCAGCAGGACCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS-3UTR GCA 90 bp ACCCCCACCCGGCTTCCTAGCGCCCTGGACGCCCACGGCCCCTCTTGGACTTCTAAGAGACCCAGCCACTaGCCTCAGGACGCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: TPTRLPSALDAHGPSWTSKRPSH*PQDAQS
Trigger: AGACTGAGCGTCCTGAGGGCAGTGGCTGGGTCTCTT...AGAAGTCCAAGAGGGGCCGTGGGCGTCCAGGGCGCTAGGAAGCCGGGTGGGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528964.5
CDS-3UTR CCA 90 bp CAGCCCTTTAATCTTCCACGGGAGCAGTTGAGCGCGGGGCGTGGCGGGCGGCCCGGCCAACGTTCACGCTaGTCTCAGTCAGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: QPFNLPREQLSAGRGGRPGQRSR*SQSAPP
Trigger: AGGTGGAGCTGACTGAGACCAGCGTGAACGTTGGCC...GGGCCGCCCGCCACGCCCCGCGCTCAACTGCTCCCGTGGAAGATTAAAGGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312629.10
CDS-3UTR CCA 90 bp CAGGGTCCTGCTGCTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACCCTCACATCAGCAGCATCCCCTaGGCCACCCCCAATCCGCTG +
Preference number: 4 (lower is better)
Translates to: QGPAALTAAGTGLKGYPHISSIP*ATPNPL
Trigger: CAGCGGATTGGGGGTGGCCCAGGGGATGCTGCTGAT...GTGAGGGTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGCAGCAGGACCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS-3UTR CCA 90 bp TGCTGCTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACCCTCACCCCCACCCAAGCCCAGGAAGGCCTaGTTGGCACTCTCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: CCSHSRRDRAQGLPSPPPKPRKA*LALSLR
Trigger: CCTCAGCGAGAGTGCCAACCAGGCCTTCCTGGGCTT...GGGTGGGGGTGAGGGTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGCAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS-3UTR CCA 90 bp CACGTATGTGAAGCCCAGGAAGGCCTGGTTGGCACTCTCGCTGAGGGCTGTGTCTGGGCTCCGGCAGGCTaGGGCTGGGCCGAAACCCCT +
Preference number: 4 (lower is better)
Translates to: HVCEAQEGLVGTLAEGCVWAPAG*GWAETP
Trigger: AGGGGTTTCGGCCCAGCCCCAGCCTGCCGGAGCCCA...GACACAGCCCTCAGCGAGAGTGCCAACCAGGCCTTCCTGGGCTTCACATACGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528964.5
CDS-3UTR TCA 90 bp CGCCACGTATGTGAAGCCCAGGAAGGCCTGGTTGGCACTCTCGCTGAGGGCTGTGTGCCGCAGAAGGTGTaGGTGACGGCGCCCTCATGG +
Preference number: 4 (lower is better)
Translates to: RHVCEAQEGLVGTLAEGCVPQKV*VTAPSW
Trigger: CCATGAGGGCGCCGTCACTCACACCTTCTGCGGCAC...ACAGCCCTCAGCGAGAGTGCCAACCAGGCCTTCCTGGGCTTCACATACGTGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR GCA 90 bp TGCTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACCCTCACCCCCACCCGGCCCCAAGTTGGTGCCTTaGACCTTTCGCACCTGGAAC +
Preference number: 4 (lower is better)
Translates to: CSHSRRDRAQGLPSPPPGPKLVP*TFRTWN
Trigger: GTTCCAGGTGCGAAAGGTGCAAGGCACCAACTTGGG...GCCGGGTGGGGGTGAGGGTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS-3UTR GCA 90 bp CCTGCTGCTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACCCTCACCCCCACCTCAGCCCGTGTGTGTaGTGTGTCCTTGGCATTGCG +
Preference number: 4 (lower is better)
Translates to: PAALTAAGTGLKGYPHPHLSPCV*CVLGIA
Trigger: CGCAATGCCAAGGACACAGCACACACACGGGCTGAG...GTGGGGGTGAGGGTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGCAGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS-3UTR GCA 90 bp CTGGCCCAGGGTCCTGCTGCTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACTTTCTTCCGGTTCTCTaGGGTGAAGGGCGGCGATCC +
Preference number: 4 (lower is better)
Translates to: LAQGPAALTAAGTGLKGYFLPVL*GEGRRS
Trigger: GGATCGCCGCCCTTCACCGCAGAGAACCGGAAGAAA...GTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGCAGCAGGACCCTGGGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS-3UTR GCA 90 bp TGCTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACCCTCACCCCCACCCGGCATTCAGGGGCACAGCTaGCCCAGCAGACACACACTT +
Preference number: 4 (lower is better)
Translates to: CSHSRRDRAQGLPSPPPGIQGHS*PSRHTL
Trigger: AAGTGTGTGTCTGCTGGGGCAGCTGTGCCCCTGAAT...GCCGGGTGGGGGTGAGGGTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS-3UTR GCA 90 bp GCGCAGCTTGGGCTGGAAGGAGAAGCCCTCCTTGATGCTGTCCAGGACAGACGGCGGTGCCTGGCCCTGTaGTGGGTGAAGCTGGGGACA +
Preference number: 4 (lower is better)
Translates to: AQLGLEGEALLDAVQDRRRCLAL*WVKLGT
Trigger: TGTCCCCAGCTTCACCCAGCACAGGGCCAGGCACCG...CCGTCTGTCCTGGACAGCATCAAGGAGGGCTTCTCCTTCCAGCCCAAGCTGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528964.5
CDS-3UTR GCA 90 bp TCCACCGGCGTCTGCCGTGTGAAGCGGGTATCAAACTGGCTCACGTCCTCCTCTCCGACGCCTACTCGGTaGCTGGCCCTGTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: STGVCRVKRVSNWLTSSSPTPTR*LALCWV
Trigger: CACCCAGCACAGGGCCAGGCACCGAGTAGGCGTCGG...AGAGGAGGACGTGAGCCAGTTTGATACCCGCTTCACACGGCAGACGCCGGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528964.5
CDS-3UTR CCA 90 bp TCTTCCACGGGAGCAGTTGAGCGCGGGGCGTGGCGGGCGGCCCTCCGTGCCCATAGTTTGATGTGGCCCTaGCTGCTGAGCATGATGTTC +
Preference number: 4 (lower is better)
Translates to: SSTGAVERGAWRAALRAHSLMWP*LLSMMF
Trigger: GAACATCATGCTCAGCAGCCAGGGCCACATCAAACT...ATGGGCACGGAGGGCCGCCCGCCACGCCCCGCGCTCAACTGCTCCCGTGGAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312629.10
CDS-3UTR CCA 90 bp AGGGATGTCTCTGCACATCAGCAGCATCCCCTGGGCCACCCCCAATCCGCTGGCGCCCACGGCCCCTCTTaGACTTCTTGGTCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: RDVSAHQQHPLGHPQSAGAHGPS*TSWSLR
Trigger: CCTCAGGGACCAAGAAGTCCAAGAGGGGCCGTGGGC...GCCAGCGGATTGGGGGTGGCCCAGGGGATGCTGCTGATGTGCAGAGACATCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528964.5
CDS-3UTR TCA 90 bp TCCACCGGCGTCTGCCGTGTGAAGCGGGTATCAAACTGGCTCACGTCCTCCTCTGTTGAGGCGCCTGGGTaGGCGCAGCTTGGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: STGVCRVKRVSNWLTSSSVEAPG*AQLGLE
Trigger: TTCCAGCCCAAGCTGCGCTCACCCAGGCGCCTCAAC...AGAGGAGGACGTGAGCCAGTTTGATACCCGCTTCACACGGCAGACGCCGGTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR GCA 90 bp CGCCACGTATGTGAAGCCCAGGAAGGCCTGGTTGGCACTCTCGCTGAGGGCTGTAGCAGTGGGGCCCGATaGGCTCTGGGCCAACGTTCA +
Preference number: 4 (lower is better)
Translates to: RHVCEAQEGLVGTLAEGCSSGAR*ALGQRS
Trigger: TGAACGTTGGCCCAGAGCGCATCGGGCCCCACTGCT...ACAGCCCTCAGCGAGAGTGCCAACCAGGCCTTCCTGGGCTTCACATACGTGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528964.5
CDS-3UTR GCA 90 bp GTTGAGCGCGGGGCGTGGCGGGCGGCCCTCCGTGCCCATGATTCAGGGGCACAGTCGTCCCAATTCATGTaGCGGAAAAAGGGATGTCTC +
Preference number: 4 (lower is better)
Translates to: VERGAWRAALRAHDSGAQSSQFM*RKKGCL
Trigger: GAGACATCCCTTTTTCCGGCACATGAATTGGGACGA...CTGTGCCCCTGAATCATGGGCACGGAGGGCCGCCCGCCACGCCCCGCGCTCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000312629.10
CDS-3UTR GCA 90 bp CGCTCCAGATGCGTGAAGAGCTCGCCACCTGCCTCACAGAGCTGCCGTGGGGATCTGTCCACCGGCGTCTaGCGTGTGAAGCGGGTATCA +
Preference number: 4 (lower is better)
Translates to: RSRCVKSSPPASQSCRGDLSTGV*RVKRVS
Trigger: TGATACCCGCTTCACACGGCAGACGCCGGTGGACAG...ATCCCCACGGCAGCTCTGTGAGGCAGGTGGCGAGCTCTTCACGCATCTGGAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528964.5
CDS-3UTR GCA 90 bp GGCCGTATCTTCCAGGAAGATGCCCTCTCGCTCCAGATGCGTGAAGAGCTCGCCCGGTGCCTGGCCCTGTaGTGGGTGAAGCTGGGGACA +
Preference number: 4 (lower is better)
Translates to: GRIFQEDALSLQMREELARCLAL*WVKLGT
Trigger: TGTCCCCAGCTTCACCCAGCACAGGGCCAGGCACCG...GGCGAGCTCTTCACGCATCTGGAGCGAGAGGGCATCTTCCTGGAAGATACGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528964.5
ENST00000556575.5
CDS-3UTR GCA 90 bp ATCTTCCAGGAAGATGCCCTCTCGCTCCAGATGCGTGAAGAGCTCGCCACCTGCCCGACGCCTACTCGGTaGCTGGCCCTGTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: IFQEDALSLQMREELATCPTPTR*LALCWV
Trigger: CACCCAGCACAGGGCCAGGCACCGAGTAGGCGTCGG...GCAGGTGGCGAGCTCTTCACGCATCTGGAGCGAGAGGGCATCTTCCTGGAAGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528964.5
ENST00000556575.5
CDS-3UTR CCA 90 bp CAGGGTCCTGCTGCTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACCCTCACGGCCAACGTTCACGCTaGTCTCAGTCAGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: QGPAALTAAGTGLKGYPHGQRSR*SQSAPP
Trigger: AGGTGGAGCTGACTGAGACCAGCGTGAACGTTGGCC...GTGAGGGTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGCAGCAGGACCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS-3UTR CCA 90 bp AGGGTCCTGCTGCTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACCCTCACCCCACCCCCAATCCGCTaGCTGGGATTCCGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: RVLLLSQPQGQGSRATLTPPPIR*LGFRFR
Trigger: TCTGAAACGGAATCCCAGCCAGCGGATTGGGGGTGG...GGTGAGGGTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGCAGCAGGACCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS-3UTR TCA 90 bp AAAGTCGGTCAGTTTGATGTGGCCCTGGCTGCTGAGCATGATGTTCTCGGGCTTATGCGTCCGCGGGGCTaGGCTCTGGCTCGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: KVGQFDVALAAEHDVLGLMRPRG*ALARPR
Trigger: GCGAGGGCGAGCCAGAGCTCAGCCCCGCGGACGCAT...AAGCCCGAGAACATCATGCTCAGCAGCCAGGGCCACATCAAACTGACCGACTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528964.5
ENST00000556575.5
CDS-3UTR TCA 90 bp CTGTCCAGGACAGACGGCGCCACGTATGTGAAGCCCAGGAAGGCCTGGTTGGCAAGGGCGGCGATCCAGTaGGCATGTCGTACATCAGGG +
Preference number: 4 (lower is better)
Translates to: LSRTDGATYVKPRKAWLARAAIQ*ACRTSG
Trigger: CCCTGATGTACGACATGCTCACTGGATCGCCGCCCT...TGCCAACCAGGCCTTCCTGGGCTTCACATACGTGGCGCCGTCTGTCCTGGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR GCA 90 bp CAGCCCTTTAATCTTCCACGGGAGCAGTTGAGCGCGGGGCGTGGCGGGCGGCCCCTGTGTCCTTGGCATTaGGCACAATTTTGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: QPFNLPREQLSAGRGGRPLCPWH*AQFWPS
Trigger: GGAAGGCCAAAATTGTGCGCAATGCCAAGGACACAG...GGGCCGCCCGCCACGCCCCGCGCTCAACTGCTCCCGTGGAAGATTAAAGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312629.10
CDS-3UTR GCA 90 bp CGCTCCAGATGCGTGAAGAGCTCGCCACCTGCCTCACAGAGCTGCCGTGGGGATCTCAGCCCGTGTGTGTaGTGTGTCCTTGGCATTGCG +
Preference number: 4 (lower is better)
Translates to: RSRCVKSSPPASQSCRGDLSPCV*CVLGIA
Trigger: CGCAATGCCAAGGACACAGCACACACACGGGCTGAG...ATCCCCACGGCAGCTCTGTGAGGCAGGTGGCGAGCTCTTCACGCATCTGGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528964.5
ENST00000556575.5
CDS-3UTR GCA 90 bp AGGAAGATGCCCTCTCGCTCCAGATGCGTGAAGAGCTCGCCACCTGCCTCACAGCCCGGTTGTGGCCACTaGGCACCAGAATCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: RKMPSRSRCVKSSPPASQPGCGH*APESQG
Trigger: CCCCTGAGATTCTGGTGCGCAGTGGCCACAACCGGG...CTGTGAGGCAGGTGGCGAGCTCTTCACGCATCTGGAGCGAGAGGGCATCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528964.5
CDS-3UTR GCA 90 bp GGTCCACACGCCAGGCCAGAAGGTCGTCCCAATTCATGTGCCGGAAAAAGGGATGGCCCAGGGTCCTGCTaGTCTCACAGCCGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: GPHARPEGRPNSCAGKRDGPGSC*SHSRRD
Trigger: GTCCCTGCGGCTGTGAGAGCAGCAGGACCCTGGGCC...ATCCCTTTTTCCGGCACATGAATTGGGACGACCTTCTGGCCTGGCGTGTGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528964.5
CDS-3UTR GCA 90 bp CGCCACGTATGTGAAGCCCAGGAAGGCCTGGTTGGCACTCTCGCTGAGGGCTGTCCCTCTCGCTCCAGATaGGTGAAGAGCTCGCCACCT +
Preference number: 4 (lower is better)
Translates to: RHVCEAQEGLVGTLAEGCPSRSR*VKSSPP
Trigger: AGGTGGCGAGCTCTTCACGCATCTGGAGCGAGAGGG...ACAGCCCTCAGCGAGAGTGCCAACCAGGCCTTCCTGGGCTTCACATACGTGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528964.5
CDS-3UTR CCA 90 bp GGCTGGAAGGAGAAGCCCTCCTTGATGCTGTCCAGGACAGACGGCGCCACGTATAGCAGCTCAAAGCAGTaGGGCCCGATGCGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: GWKEKPSLMLSRTDGATYSSSKQ*GPMRSG
Trigger: CCCAGAGCGCATCGGGCCCCACTGCTTTGAGCTGCT...ATACGTGGCGCCGTCTGTCCTGGACAGCATCAAGGAGGGCTTCTCCTTCCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528964.5
CDS-3UTR CCA 90 bp ATCTTCCAGGAAGATGCCCTCTCGCTCCAGATGCGTGAAGAGCTCGCCACCTGCCCCTGGGAGTGGAGATaGCCCAGGGCCAGCGTGATC +
Preference number: 4 (lower is better)
Translates to: IFQEDALSLQMREELATCPWEWR*PRASVI
Trigger: GATCACGCTGGCCCTGGGCCATCTCCACTCCCAGGG...GCAGGTGGCGAGCTCTTCACGCATCTGGAGCGAGAGGGCATCTTCCTGGAAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528964.5
ENST00000556575.5
CDS-3UTR CCA 90 bp CTGGCCCAGGGTCCTGCTGCTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACCCCCAATCCGCTGGCTaGGATTCCGTTTCAGAAACT +
Preference number: 4 (lower is better)
Translates to: LAQGPAALTAAGTGLKGYPQSAG*DSVSET
Trigger: AGTTTCTGAAACGGAATCCCAGCCAGCGGATTGGGG...GTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGCAGCAGGACCCTGGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS-3UTR CCA 90 bp AGGGATGTCTCTGCACATCAGCAGCATCCCCTGGGCCACCCCCAATCCGCTGGCCCACCCCCAATCCGCTaGCTGGGATTCCGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: RDVSAHQQHPLGHPQSAGPPPIR*LGFRFR
Trigger: TCTGAAACGGAATCCCAGCCAGCGGATTGGGGGTGG...GCCAGCGGATTGGGGGTGGCCCAGGGGATGCTGCTGATGTGCAGAGACATCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR CCA 90 bp TGCTGCTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACCCTCACCCCCACCCAAGCGGGTATCAAACTaGCTCACGTCCTCCTCTGAC +
Preference number: 4 (lower is better)
Translates to: CCSHSRRDRAQGLPSPPPKRVSN*LTSSSD
Trigger: GTCAGAGGAGGACGTGAGCCAGTTTGATACCCGCTT...GGGTGGGGGTGAGGGTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS-3UTR CCA 90 bp TTCTCTGCGGTGAAGGGCGGCGATCCAGTGAGCATGTCGTACATCAGGGCCCCCAAGCCCAGGAAGGCCTaGTTGGCACTCTCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: FSAVKGGDPVSMSYIRAPKPRKA*LALSLR
Trigger: CCTCAGCGAGAGTGCCAACCAGGCCTTCCTGGGCTT...GGGGGCCCTGATGTACGACATGCTCACTGGATCGCCGCCCTTCACCGCAGAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
3UTR CAA 72 bp GGTGAGCGCAGCTTGGGCTGGAAGGAGAAGCCCTCCTaGATGCTGTCCAGGACAGACGGCGCCACGTATGTG +
Preference number: 4 (lower is better)
Translates to: GERSLGWKEKPS*MLSRTDGATYV
Trigger: CACATACGTGGCGCCGTCTGTCCTGGACAGCATCAAGGAGGGCTTCTCCTTCCAGCCCAAGCTGCGCTCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR TCA 90 bp TGCTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACCCTCACCCCCACCCGGCGTTTCAGAAACTTTTTaGCAAGGTCCCGGGCATCTG +
Preference number: 4 (lower is better)
Translates to: CSHSRRDRAQGLPSPPPGVSETF*QGPGHL
Trigger: CAGATGCCCGGGACCTTGTCAAAAAGTTTCTGAAAC...GCCGGGTGGGGGTGAGGGTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS-3UTR TCA 90 bp CATGGTTTTCTTCCGGTTCTCTGCGGTGAAGGGCGGCGATCCAGTGAGCATGTCGTTGAGGCGCCTGGGTaGGCGCAGCTTGGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: HGFLPVLCGEGRRSSEHVVEAPG*AQLGLE
Trigger: TTCCAGCCCAAGCTGCGCTCACCCAGGCGCCTCAAC...GACATGCTCACTGGATCGCCGCCCTTCACCGCAGAGAACCGGAAGAAAACCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR GCA 90 bp ATCTTCCAGGAAGATGCCCTCTCGCTCCAGATGCGTGAAGAGCTCGCCACCTGCCGCCCTCGCCCTCGCTaGCTTCCTCCGTCTCCAAAT +
Preference number: 4 (lower is better)
Translates to: IFQEDALSLQMREELATCRPRPR*LPPSPN
Trigger: ATTTGGAGACGGAGGAAGGCAGCGAGGGCGAGGGCG...GCAGGTGGCGAGCTCTTCACGCATCTGGAGCGAGAGGGCATCTTCCTGGAAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528964.5
ENST00000556575.5
CDS-3UTR GCA 90 bp CTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACCCTCACCCCCACCCGGCTTTTTTGCCCAAGTTGGTaGCTTGCACCTTTCGCACCT +
Preference number: 4 (lower is better)
Translates to: LSQPQGQGSRATLTPTRLFCPSW*LAPFAP
Trigger: AGGTGCGAAAGGTGCAAGGCACCAACTTGGGCAAAA...AAGCCGGGTGGGGGTGAGGGTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS-3UTR GCA 90 bp CGTGTGAAGCGGGTATCAAACTGGCTCACGTCCTCCTCTGACTGCAGACAGGGCCCCGGTTGTGGCCACTaGGCACCAGAATCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: RVKRVSNWLTSSSDCRQGPGCGH*APESQG
Trigger: CCCCTGAGATTCTGGTGCGCAGTGGCCACAACCGGG...GCCCTGTCTGCAGTCAGAGGAGGACGTGAGCCAGTTTGATACCCGCTTCACACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR GCA 90 bp CTGTCCAGGACAGACGGCGCCACGTATGTGAAGCCCAGGAAGGCCTGGTTGGCATTTCTTCCGGTTCTCTaGGGTGAAGGGCGGCGATCC +
Preference number: 4 (lower is better)
Translates to: LSRTDGATYVKPRKAWLAFLPVL*GEGRRS
Trigger: GGATCGCCGCCCTTCACCGCAGAGAACCGGAAGAAA...TGCCAACCAGGCCTTCCTGGGCTTCACATACGTGGCGCCGTCTGTCCTGGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR GCA 90 bp GATGCTGTCCAGGACAGACGGCGCCACGTATGTGAAGCCCAGGAAGGCCTGGTTCTGTCCACCGGCGTCTaGCGTGTGAAGCGGGTATCA +
Preference number: 4 (lower is better)
Translates to: DAVQDRRRHVCEAQEGLVLSTGV*RVKRVS
Trigger: TGATACCCGCTTCACACGGCAGACGCCGGTGGACAG...AACCAGGCCTTCCTGGGCTTCACATACGTGGCGCCGTCTGTCCTGGACAGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR GCA 90 bp ATCTTCCAGGAAGATGCCCTCTCGCTCCAGATGCGTGAAGAGCTCGCCACCTGCGAAGAGCTCGCCACCTaGCTCACAGAGCTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: IFQEDALSLQMREELATCEELAT*LTELPW
Trigger: CCACGGCAGCTCTGTGAGGCAGGTGGCGAGCTCTTC...GCAGGTGGCGAGCTCTTCACGCATCTGGAGCGAGAGGGCATCTTCCTGGAAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528964.5
ENST00000556575.5
CDS-3UTR CCA 90 bp TCCACCGGCGTCTGCCGTGTGAAGCGGGTATCAAACTGGCTCACGTCCTCCTCTTCCACAGCCCGGTTGTaGCCACTGCGCACCAGAATC +
Preference number: 4 (lower is better)
Translates to: STGVCRVKRVSNWLTSSSSTARL*PLRTRI
Trigger: GATTCTGGTGCGCAGTGGCCACAACCGGGCTGTGGA...AGAGGAGGACGTGAGCCAGTTTGATACCCGCTTCACACGGCAGACGCCGGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR CCA 90 bp ACTGGCCCAGGGTCCTGCTGCTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACCCCAATCCGCTGGCTaGGATTCCGTTTCAGAAACT +
Preference number: 4 (lower is better)
Translates to: TGPGSCCSHSRRDRAQGLPQSAG*DSVSET
Trigger: AGTTTCTGAAACGGAATCCCAGCCAGCGGATTGGGG...TAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGCAGCAGGACCCTGGGCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS-3UTR CCA 90 bp GGCTGGAAGGAGAAGCCCTCCTTGATGCTGTCCAGGACAGACGGCGCCACGTATGAGCGCAGCTTGGGCTaGAAGGAGAAGCCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: GWKEKPSLMLSRTDGATYERSLG*KEKPSL
Trigger: CAAGGAGGGCTTCTCCTTCCAGCCCAAGCTGCGCTC...ATACGTGGCGCCGTCTGTCCTGGACAGCATCAAGGAGGGCTTCTCCTTCCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR CCA 90 bp GCCCTCCTTGATGCTGTCCAGGACAGACGGCGCCACGTATGTGAAGCCCAGGAATGGGTGAGCGCAGCTTaGGCTGGAAGGAGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: ALLDAVQDRRRHVCEAQEWVSAA*AGRRSP
Trigger: AGGGCTTCTCCTTCCAGCCCAAGCTGCGCTCACCCA...TTCCTGGGCTTCACATACGTGGCGCCGTCTGTCCTGGACAGCATCAAGGAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR CCA 90 bp GATGCTGTCCAGGACAGACGGCGCCACGTATGTGAAGCCCAGGAAGGCCTGGTTTGGGTGAGCGCAGCTTaGGCTGGAAGGAGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: DAVQDRRRHVCEAQEGLVWVSAA*AGRRSP
Trigger: AGGGCTTCTCCTTCCAGCCCAAGCTGCGCTCACCCA...AACCAGGCCTTCCTGGGCTTCACATACGTGGCGCCGTCTGTCCTGGACAGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR CCA 90 bp TCCACACGCCAGGCCAGAAGGTCGTCCCAATTCATGTGCCGGAAAAAGGGATGTGGCTTCCTAGCGCCCTaGACGCCCACGGCCCCTCTT +
Preference number: 4 (lower is better)
Translates to: STRQARRSSQFMCRKKGCGFLAP*TPTAPL
Trigger: AAGAGGGGCCGTGGGCGTCCAGGGCGCTAGGAAGCC...ACATCCCTTTTTCCGGCACATGAATTGGGACGACCTTCTGGCCTGGCGTGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528964.5
CDS-3UTR TCA 90 bp AAGAGCTCGCCACCTGCCTCACAGAGCTGCCGTGGGGATTCAATTCAATTCAGCGGCCCAGGGCCAGCGTaGTCTCAGCCAGGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: KSSPPASQSCRGDSIQFSGPGPA*SQPGRS
Trigger: GCTTCTACCTGGCTGAGATCACGCTGGCCCTGGGCC...GCTGAATTGAATTGAATCCCCACGGCAGCTCTGTGAGGCAGGTGGCGAGCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528964.5
ENST00000556575.5
CDS-3UTR TCA 90 bp ATGCTGTCCAGGACAGACGGCGCCACGTATGTGAAGCCCAGGAAGGCCTGGTTGAGGAGAAGCCCTCCTTaGTGCTGTCCAGGACAGACG +
Preference number: 4 (lower is better)
Translates to: MLSRTDGATYVKPRKAWLRRSPP*CCPGQT
Trigger: CGTCTGTCCTGGACAGCATCAAGGAGGGCTTCTCCT...CAACCAGGCCTTCCTGGGCTTCACATACGTGGCGCCGTCTGTCCTGGACAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR TCA 90 bp GTCGGTCAGTTTGATGTGGCCCTGGCTGCTGAGCATGATGTTCTCGGGCTTGAGCTCGCTCCAGATGCGTaGAGAGCTCGCCACCTGCCT +
Preference number: 4 (lower is better)
Translates to: VGQFDVALAAEHDVLGLELAPDA*RARHLP
Trigger: AGGCAGGTGGCGAGCTCTTCACGCATCTGGAGCGAG...CTCAAGCCCGAGAACATCATGCTCAGCAGCCAGGGCCACATCAAACTGACCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528964.5
ENST00000556575.5
CDS-3UTR GCA 90 bp GTATCTTCCAGGAAGATGCCCTCTCGCTCCAGATGCGTGAAGAGCTCGCCACCTCGCCCTCGCCCTCGCTaGCTTCCTCCGTCTCCAAAT +
Preference number: 4 (lower is better)
Translates to: VSSRKMPSRSRCVKSSPPRPRPR*LPPSPN
Trigger: ATTTGGAGACGGAGGAAGGCAGCGAGGGCGAGGGCG...AGGTGGCGAGCTCTTCACGCATCTGGAGCGAGAGGGCATCTTCCTGGAAGATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528964.5
ENST00000556575.5
CDS-3UTR GCA 90 bp ACTGTCCACCGGCGTCTGCCGTGTGAAGCGGGTATCAAACTGGCTCACGTCCTCCTCAGCCCGTGTGTGTaGTGTGTCCTTGGCATTGCG +
Preference number: 4 (lower is better)
Translates to: TVHRRLPCEAGIKLAHVLLSPCV*CVLGIA
Trigger: CGCAATGCCAAGGACACAGCACACACACGGGCTGAG...GAGGACGTGAGCCAGTTTGATACCCGCTTCACACGGCAGACGCCGGTGGACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR GCA 90 bp TTCTCTGCGGTGAAGGGCGGCGATCCAGTGAGCATGTCGTACATCAGGGCCCCCATTCAGGGGCACAGCTaGCCCAGCAGACACACACTT +
Preference number: 4 (lower is better)
Translates to: FSAVKGGDPVSMSYIRAPIQGHS*PSRHTL
Trigger: AAGTGTGTGTCTGCTGGGGCAGCTGTGCCCCTGAAT...GGGGGCCCTGATGTACGACATGCTCACTGGATCGCCGCCCTTCACCGCAGAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528964.5
CDS-3UTR GCA 90 bp CGCTCCAGATGCGTGAAGAGCTCGCCACCTGCCTCACAGAGCTGCCGTGGGGATCCTGCCTCACAGAGCTaGCGTGGGGATTCAATTCAA +
Preference number: 4 (lower is better)
Translates to: RSRCVKSSPPASQSCRGDPASQS*RGDSIQ
Trigger: TTGAATTGAATCCCCACGGCAGCTCTGTGAGGCAGG...ATCCCCACGGCAGCTCTGTGAGGCAGGTGGCGAGCTCTTCACGCATCTGGAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528964.5
ENST00000556575.5
CDS-3UTR GCA 90 bp AAGGAGAAGCCCTCCTTGATGCTGTCCAGGACAGACGGCGCCACGTATGTGAAGGAAGAGCTCGCCACCTaGCTCACAGAGCTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: KEKPSLMLSRTDGATYVKEELAT*LTELPW
Trigger: CCACGGCAGCTCTGTGAGGCAGGTGGCGAGCTCTTC...CTTCACATACGTGGCGCCGTCTGTCCTGGACAGCATCAAGGAGGGCTTCTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528964.5
CDS-3UTR CCA 90 bp GGCCAGAAGGTCGTCCCAATTCATGTGCCGGAAAAAGGGATGTCTCTGCACATCGTAGAGGTAGCTCCGTaGGCTCCGGCAGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GQKVVPIHVPEKGMSLHIVEVAP*APAGWG
Trigger: GCCCCAGCCTGCCGGAGCCCACGGAGCTACCTCTAC...GATGTGCAGAGACATCCCTTTTTCCGGCACATGAATTGGGACGACCTTCTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528964.5
CDS-3UTR TCA 90 bp CTTATCCATGGTTTTCTTCCGGTTCTCTGCGGTGAAGGGCGGCGATCCAGTGAGCCGGCGTCTGCCGTGTaGAGCGGGTATCAAACTGGC +
Preference number: 4 (lower is better)
Translates to: LIHGFLPVLCGEGRRSSEPASAV*SGYQTG
Trigger: GCCAGTTTGATACCCGCTTCACACGGCAGACGCCGG...CTCACTGGATCGCCGCCCTTCACCGCAGAGAACCGGAAGAAAACCATGGATAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR TCA 90 bp GGTCCACACGCCAGGCCAGAAGGTCGTCCCAATTCATGTGCCGGAAAAAGGGATGGTTGGCACTCTCGCTaGGGGCTGTGTCATCAGGAC +
Preference number: 4 (lower is better)
Translates to: GPHARPEGRPNSCAGKRDGWHSR*GLCHQD
Trigger: GTCCTGATGACACAGCCCTCAGCGAGAGTGCCAACC...ATCCCTTTTTCCGGCACATGAATTGGGACGACCTTCTGGCCTGGCGTGTGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR TCA 90 bp GTCGGTCAGTTTGATGTGGCCCTGGCTGCTGAGCATGATGTTCTCGGGCTTGAGAAGCTGGGGACAGGATaGAGAGACCCAGCCACTGCC +
Preference number: 4 (lower is better)
Translates to: VGQFDVALAAEHDVLGLEKLGTG*RDPATA
Trigger: GGCAGTGGCTGGGTCTCTTCATCCTGTCCCCAGCTT...CTCAAGCCCGAGAACATCATGCTCAGCAGCCAGGGCCACATCAAACTGACCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528964.5
ENST00000556575.5
CDS-3UTR CCA 90 bp CTGGCCCAGGGTCCTGCTGCTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACATATTTTGCCCAAGTTaGTGCCTTGCACCTTTCGCA +
Preference number: 4 (lower is better)
Translates to: LAQGPAALTAAGTGLKGYIFCPS*CLAPFA
Trigger: TGCGAAAGGTGCAAGGCACCAACTTGGGCAAAATAT...GTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGCAGCAGGACCCTGGGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS-3UTR CCA 90 bp CGCTCCAGATGCGTGAAGAGCTCGCCACCTGCCTCACAGAGCTGCCGTGGGGATAGTTTGATGTGGCCCTaGCTGCTGAGCATGATGTTC +
Preference number: 4 (lower is better)
Translates to: RSRCVKSSPPASQSCRGDSLMWP*LLSMMF
Trigger: GAACATCATGCTCAGCAGCCAGGGCCACATCAAACT...ATCCCCACGGCAGCTCTGTGAGGCAGGTGGCGAGCTCTTCACGCATCTGGAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528964.5
ENST00000556575.5
CDS-3UTR CCA 90 bp GAGAAGCCCTCCTTGATGCTGTCCAGGACAGACGGCGCCACGTATGTGAAGCCCGTGACGGCGCCCTCATaGATAGACTCCTTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: EKPSLMLSRTDGATYVKPVTAPS*IDSLQS
Trigger: ACTCTGCAAGGAGTCTATCCATGAGGGCGCCGTCAC...GGGCTTCACATACGTGGCGCCGTCTGTCCTGGACAGCATCAAGGAGGGCTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR CCA 90 bp CATGGTTTTCTTCCGGTTCTCTGCGGTGAAGGGCGGCGATCCAGTGAGCATGTCTCCACAGCCCGGTTGTaGCCACTGCGCACCAGAATC +
Preference number: 4 (lower is better)
Translates to: HGFLPVLCGEGRRSSEHVSTARL*PLRTRI
Trigger: GATTCTGGTGCGCAGTGGCCACAACCGGGCTGTGGA...GACATGCTCACTGGATCGCCGCCCTTCACCGCAGAGAACCGGAAGAAAACCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR TCA 90 bp AAGTCGGTCAGTTTGATGTGGCCCTGGCTGCTGAGCATGATGTTCTCGGGCTTGGGTTGGCACTCTCGCTaGGGGCTGTGTCATCAGGAC +
Preference number: 4 (lower is better)
Translates to: KSVSLMWPWLLSMMFSGLGWHSR*GLCHQD
Trigger: GTCCTGATGACACAGCCCTCAGCGAGAGTGCCAACC...CAAGCCCGAGAACATCATGCTCAGCAGCCAGGGCCACATCAAACTGACCGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528964.5
CDS-3UTR GCA 90 bp GCCCAGGGTCCTGCTGCTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACCCTTCATGGCATATATTTTaGCCAAGTTGGTGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: AQGPAALTAAGTGLKGYPSWHIF*PSWCLA
Trigger: TGCAAGGCACCAACTTGGGCAAAATATATGCCATGA...AGGGTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGCAGCAGGACCCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS-3UTR GCA 90 bp CTGTCCAGGACAGACGGCGCCACGTATGTGAAGCCCAGGAAGGCCTGGTTGGCACTGTGTCCTTGGCATTaGGCACAATTTTGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: LSRTDGATYVKPRKAWLALCPWH*AQFWPS
Trigger: GGAAGGCCAAAATTGTGCGCAATGCCAAGGACACAG...TGCCAACCAGGCCTTCCTGGGCTTCACATACGTGGCGCCGTCTGTCCTGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR GCA 90 bp CATGGTTTTCTTCCGGTTCTCTGCGGTGAAGGGCGGCGATCCAGTGAGCATGTCTTTCTTCCGGTTCTCTaGGGTGAAGGGCGGCGATCC +
Preference number: 4 (lower is better)
Translates to: HGFLPVLCGEGRRSSEHVFLPVL*GEGRRS
Trigger: GGATCGCCGCCCTTCACCGCAGAGAACCGGAAGAAA...GACATGCTCACTGGATCGCCGCCCTTCACCGCAGAGAACCGGAAGAAAACCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR GCA 90 bp AAGAGCTCGCCACCTGCCTCACAGAGCTGCCGTGGGGATTCAATTCAATTCAGCCCCTCTCGCTCCAGATaGGTGAAGAGCTCGCCACCT +
Preference number: 4 (lower is better)
Translates to: KSSPPASQSCRGDSIQFSPSRSR*VKSSPP
Trigger: AGGTGGCGAGCTCTTCACGCATCTGGAGCGAGAGGG...GCTGAATTGAATTGAATCCCCACGGCAGCTCTGTGAGGCAGGTGGCGAGCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528964.5
ENST00000556575.5
CDS-3UTR GCA 90 bp GTATCTTCCAGGAAGATGCCCTCTCGCTCCAGATGCGTGAAGAGCTCGCCACCTAAGAGACCCAGCCACTaGCCTCAGGACGCTCAGTCA +
Preference number: 4 (lower is better)
Translates to: VSSRKMPSRSRCVKSSPPKRPSH*PQDAQS
Trigger: TGACTGAGCGTCCTGAGGGCAGTGGCTGGGTCTCTT...AGGTGGCGAGCTCTTCACGCATCTGGAGCGAGAGGGCATCTTCCTGGAAGATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556575.5
CDS-3UTR CCA 90 bp GGCTGGAAGGAGAAGCCCTCCTTGATGCTGTCCAGGACAGACGGCGCCACGTATCCCCAATCCGCTGGCTaGGATTCCGTTTCAGAAACT +
Preference number: 4 (lower is better)
Translates to: GWKEKPSLMLSRTDGATYPQSAG*DSVSET
Trigger: AGTTTCTGAAACGGAATCCCAGCCAGCGGATTGGGG...ATACGTGGCGCCGTCTGTCCTGGACAGCATCAAGGAGGGCTTCTCCTTCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR CCA 90 bp GTCTGCCGTGTGAAGCGGGTATCAAACTGGCTCACGTCCTCCTCTGACTGCAGACCACCCCCAATCCGCTaGCTGGGATTCCGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: VCRVKRVSNWLTSSSDCRPPPIR*LGFRFR
Trigger: TCTGAAACGGAATCCCAGCCAGCGGATTGGGGGTGG...TCTGCAGTCAGAGGAGGACGTGAGCCAGTTTGATACCCGCTTCACACGGCAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR CCA 90 bp GATGCTGTCCAGGACAGACGGCGCCACGTATGTGAAGCCCAGGAAGGCCTGGTTAAGCGGGTATCAAACTaGCTCACGTCCTCCTCTGAC +
Preference number: 4 (lower is better)
Translates to: DAVQDRRRHVCEAQEGLVKRVSN*LTSSSD
Trigger: GTCAGAGGAGGACGTGAGCCAGTTTGATACCCGCTT...AACCAGGCCTTCCTGGGCTTCACATACGTGGCGCCGTCTGTCCTGGACAGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR CCA 90 bp CGCTCCAGATGCGTGAAGAGCTCGCCACCTGCCTCACAGAGCTGCCGTGGGGATCTCACAGAGCTGCCGTaGGGATTCAATTCAATTCAG +
Preference number: 4 (lower is better)
Translates to: RSRCVKSSPPASQSCRGDLTELP*GFNSIQ
Trigger: CTGAATTGAATTGAATCCCCACGGCAGCTCTGTGAG...ATCCCCACGGCAGCTCTGTGAGGCAGGTGGCGAGCTCTTCACGCATCTGGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528964.5
ENST00000556575.5
CDS-3UTR CCA 90 bp ATGCTGTCCAGGACAGACGGCGCCACGTATGTGAAGCCCAGGAAGGCCTGGTTGTCGGTCAGTTTGATGTaGCCAGGCCGTATCTTCCAG +
Preference number: 4 (lower is better)
Translates to: MLSRTDGATYVKPRKAWLSVSLM*PGRIFQ
Trigger: CTGGAAGATACGGCCTGGCCACATCAAACTGACCGA...CAACCAGGCCTTCCTGGGCTTCACATACGTGGCGCCGTCTGTCCTGGACAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525996.7
CDS-3UTR TCA 90 bp GGCCAGAAGGTCGTCCCAATTCATGTGCCGGAAAAAGGGATGTCTCTGCACATCAGGGCGGCGATCCAGTaGGCATGTCGTACATCAGGG +
Preference number: 4 (lower is better)
Translates to: GQKVVPIHVPEKGMSLHIRAAIQ*ACRTSG
Trigger: CCCTGATGTACGACATGCTCACTGGATCGCCGCCCT...GATGTGCAGAGACATCCCTTTTTCCGGCACATGAATTGGGACGACCTTCTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR TCA 90 bp TCCACACGCCAGGCCAGAAGGTCGTCCCAATTCATGTGCCGGAAAAAGGGATGTAGGAGAAGCCCTCCTTaGTGCTGTCCAGGACAGACG +
Preference number: 4 (lower is better)
Translates to: STRQARRSSQFMCRKKGCRRSPP*CCPGQT
Trigger: CGTCTGTCCTGGACAGCATCAAGGAGGGCTTCTCCT...ACATCCCTTTTTCCGGCACATGAATTGGGACGACCTTCTGGCCTGGCGTGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR GCA 90 bp GATGCTGTCCAGGACAGACGGCGCCACGTATGTGAAGCCCAGGAAGGCCTGGTTTTTTGCCCAAGTTGGTaGCTTGCACCTTTCGCACCT +
Preference number: 4 (lower is better)
Translates to: DAVQDRRRHVCEAQEGLVFCPSW*LAPFAP
Trigger: AGGTGCGAAAGGTGCAAGGCACCAACTTGGGCAAAA...AACCAGGCCTTCCTGGGCTTCACATACGTGGCGCCGTCTGTCCTGGACAGCATC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR GCA 90 bp GAGAAGCCCTCCTTGATGCTGTCCAGGACAGACGGCGCCACGTATGTGAAGCCCTTTTGCCCAAGTTGGTaGCTTGCACCTTTCGCACCT +
Preference number: 4 (lower is better)
Translates to: EKPSLMLSRTDGATYVKPFCPSW*LAPFAP
Trigger: AGGTGCGAAAGGTGCAAGGCACCAACTTGGGCAAAA...GGGCTTCACATACGTGGCGCCGTCTGTCCTGGACAGCATCAAGGAGGGCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR GCA 90 bp CAGGAAGGCCTGGTTGGCACTCTCGCTGAGGGCTGTGTCATCAGGACTGTCCACCTGTGTCCTTGGCATTaGGCACAATTTTGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: QEGLVGTLAEGCVIRTVHLCPWH*AQFWPS
Trigger: GGAAGGCCAAAATTGTGCGCAATGCCAAGGACACAG...GTGGACAGTCCTGATGACACAGCCCTCAGCGAGAGTGCCAACCAGGCCTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR GCA 90 bp AGGAAGATGCCCTCTCGCTCCAGATGCGTGAAGAGCTCGCCACCTGCCTCACAGCTGTGTCCTTGGCATTaGGCACAATTTTGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: RKMPSRSRCVKSSPPASQLCPWH*AQFWPS
Trigger: GGAAGGCCAAAATTGTGCGCAATGCCAAGGACACAG...CTGTGAGGCAGGTGGCGAGCTCTTCACGCATCTGGAGCGAGAGGGCATCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528964.5
ENST00000556575.5
CDS-3UTR GCA 90 bp ACTGGCCCAGGGTCCTGCTGCTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTATCCACAATAAAGGGGTaGTTCACTGACTCTAGAATG +
Preference number: 4 (lower is better)
Translates to: TGPGSCCSHSRRDRAQGLSTIKG*FTDSRM
Trigger: CATTCTAGAGTCAGTGAAGCACCCCTTTATTGTGGA...TAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGCAGCAGGACCCTGGGCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS-3UTR GCA 90 bp CGTGTGAAGCGGGTATCAAACTGGCTCACGTCCTCCTCTGACTGCAGACAGGGCCCTGCCTCACAGAGCTaGCGTGGGGATTCAATTCAA +
Preference number: 4 (lower is better)
Translates to: RVKRVSNWLTSSSDCRQGPASQS*RGDSIQ
Trigger: TTGAATTGAATCCCCACGGCAGCTCTGTGAGGCAGG...GCCCTGTCTGCAGTCAGAGGAGGACGTGAGCCAGTTTGATACCCGCTTCACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528964.5
CDS-3UTR CCA 90 bp AAGAGCTCGCCACCTGCCTCACAGAGCTGCCGTGGGGATTCAATTCAATTCAGCGGCCAACGTTCACGCTaGTCTCAGTCAGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: KSSPPASQSCRGDSIQFSGQRSR*SQSAPP
Trigger: AGGTGGAGCTGACTGAGACCAGCGTGAACGTTGGCC...GCTGAATTGAATTGAATCCCCACGGCAGCTCTGTGAGGCAGGTGGCGAGCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528964.5
ENST00000556575.5
CDS-3UTR TCA 90 bp GATGCTGTCCAGGACAGACGGCGCCACGTATGTGAAGCCCAGGAAGGCCTGGTTGTTTCAGAAACTTTTTaGCAAGGTCCCGGGCATCTG +
Preference number: 4 (lower is better)
Translates to: DAVQDRRRHVCEAQEGLVVSETF*QGPGHL
Trigger: CAGATGCCCGGGACCTTGTCAAAAAGTTTCTGAAAC...AACCAGGCCTTCCTGGGCTTCACATACGTGGCGCCGTCTGTCCTGGACAGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR TCA 90 bp TCCACCGGCGTCTGCCGTGTGAAGCGGGTATCAAACTGGCTCACGTCCTCCTCTGTTTCAGAAACTTTTTaGCAAGGTCCCGGGCATCTG +
Preference number: 4 (lower is better)
Translates to: STGVCRVKRVSNWLTSSSVSETF*QGPGHL
Trigger: CAGATGCCCGGGACCTTGTCAAAAAGTTTCTGAAAC...AGAGGAGGACGTGAGCCAGTTTGATACCCGCTTCACACGGCAGACGCCGGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR GCA 90 bp AAGTCGGTCAGTTTGATGTGGCCCTGGCTGCTGAGCATGATGTTCTCGGGCTTGCCCAAGTTGGTGCCTTaGACCTTTCGCACCTGGAAC +
Preference number: 4 (lower is better)
Translates to: KSVSLMWPWLLSMMFSGLPKLVP*TFRTWN
Trigger: GTTCCAGGTGCGAAAGGTGCAAGGCACCAACTTGGG...CAAGCCCGAGAACATCATGCTCAGCAGCCAGGGCCACATCAAACTGACCGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528964.5
ENST00000556575.5
CDS-3UTR GCA 90 bp CGCTCCAGATGCGTGAAGAGCTCGCCACCTGCCTCACAGAGCTGCCGTGGGGATTCCACAATAAAGGGGTaGTTCACTGACTCTAGAATG +
Preference number: 4 (lower is better)
Translates to: RSRCVKSSPPASQSCRGDSTIKG*FTDSRM
Trigger: CATTCTAGAGTCAGTGAAGCACCCCTTTATTGTGGA...ATCCCCACGGCAGCTCTGTGAGGCAGGTGGCGAGCTCTTCACGCATCTGGAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528964.5
ENST00000556575.5
CDS-3UTR CCA 90 bp CGGTTCTCTGCGGTGAAGGGCGGCGATCCAGTGAGCATGTCGTACATCAGGGCCATATTTTGCCCAAGTTaGTGCCTTGCACCTTTCGCA +
Preference number: 4 (lower is better)
Translates to: RFSAVKGGDPVSMSYIRAIFCPS*CLAPFA
Trigger: TGCGAAAGGTGCAAGGCACCAACTTGGGCAAAATAT...GGCCCTGATGTACGACATGCTCACTGGATCGCCGCCCTTCACCGCAGAGAACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR CCA 90 bp ATTCAGCCCTTTAATCTTCCACGGGAGCAGTTGAGCGCGGGGCGTGGCGGGCGGCATTGCGCACAATTTTaGCCTTCCTTAGGACTTTCA +
Preference number: 4 (lower is better)
Translates to: IQPFNLPREQLSAGRGGRHCAQF*PSLGLS
Trigger: TGAAAGTCCTAAGGAAGGCCAAAATTGTGCGCAATG...CCGCCCGCCACGCCCCGCGCTCAACTGCTCCCGTGGAAGATTAAAGGGCTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312629.10
CDS-3UTR CCA 90 bp CTTATCCATGGTTTTCTTCCGGTTCTCTGCGGTGAAGGGCGGCGATCCAGTGAGGTGACGGCGCCCTCATaGATAGACTCCTTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: LIHGFLPVLCGEGRRSSEVTAPS*IDSLQS
Trigger: ACTCTGCAAGGAGTCTATCCATGAGGGCGCCGTCAC...CTCACTGGATCGCCGCCCTTCACCGCAGAGAACCGGAAGAAAACCATGGATAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR CCA 90 bp GTCTGCCGTGTGAAGCGGGTATCAAACTGGCTCACGTCCTCCTCTGACTGCAGAAAGCGGGTATCAAACTaGCTCACGTCCTCCTCTGAC +
Preference number: 4 (lower is better)
Translates to: VCRVKRVSNWLTSSSDCRKRVSN*LTSSSD
Trigger: GTCAGAGGAGGACGTGAGCCAGTTTGATACCCGCTT...TCTGCAGTCAGAGGAGGACGTGAGCCAGTTTGATACCCGCTTCACACGGCAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR CCA 90 bp ATGCTGTCCAGGACAGACGGCGCCACGTATGTGAAGCCCAGGAAGGCCTGGTTGCTCACAGAGCTGCCGTaGGGATTCAATTCAATTCAG +
Preference number: 4 (lower is better)
Translates to: MLSRTDGATYVKPRKAWLLTELP*GFNSIQ
Trigger: CTGAATTGAATTGAATCCCCACGGCAGCTCTGTGAG...CAACCAGGCCTTCCTGGGCTTCACATACGTGGCGCCGTCTGTCCTGGACAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528964.5
CDS-3UTR GCA 90 bp AGCTTGCCCCTGATGATCTTATCCATGGTTTTCTTCCGGTTCTCTGCGGTGAAGCCCTCTCGCTCCAGATaGGTGAAGAGCTCGCCACCA +
Preference number: 4 (lower is better)
Translates to: SLPLMILSMVFFRFSAVKPSRSR*VKSSPP
Trigger: TGGTGGCGAGCTCTTCACGCATCTGGAGCGAGAGGG...CTTCACCGCAGAGAACCGGAAGAAAACCATGGATAAGATCATCAGGGGCAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525996.7
CDS-3UTR GCA 90 bp CGTGTGAAGCGGGTATCAAACTGGCTCACGTCCTCCTCTGACTGCAGACAGGGCTCGTCCCAATTCATGTaGCGGAAAAAGGGATGTCTC +
Preference number: 4 (lower is better)
Translates to: RVKRVSNWLTSSSDCRQGSSQFM*RKKGCL
Trigger: GAGACATCCCTTTTTCCGGCACATGAATTGGGACGA...GCCCTGTCTGCAGTCAGAGGAGGACGTGAGCCAGTTTGATACCCGCTTCACACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR TCA 90 bp CCACCCCCAATCCGCTGGCTGGGATTCCGTTTCAGAAACTTTTTGACAAGGTCCCAAAGTCGGTCAGTTTaGTGTGGCCAGGCCGTATCT +
Preference number: 4 (lower is better)
Translates to: PPPIRWLGFRFRNFLTRSQSRSV*CGQAVS
Trigger: AGATACGGCCTGGCCACATCAAACTGACCGACTTTG...GGACCTTGTCAAAAAGTTTCTGAAACGGAATCCCAGCCAGCGGATTGGGGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000525996.7
CDS-3UTR GCA 90 bp GGGATTCCGTTTCAGAAACTTTTTGACAAGGTCCCGGGCATCTGGGGTGAGGTACCCAAGTTGGTGCCTTaGACCTTTCGCACCTGGAAC +
Preference number: 4 (lower is better)
Translates to: GIPFQKLFDKVPGIWGEVPKLVP*TFRTWN
Trigger: GTTCCAGGTGCGAAAGGTGCAAGGCACCAACTTGGG...TACCTCACCCCAGATGCCCGGGACCTTGTCAAAAAGTTTCTGAAACGGAATCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR GCA 90 bp GCTCGCCACCTGCCTCACAGAGCTGCCGTGGGGATTCAATTCAATTCAGCAAACTTTTGCCCAAGTTGGTaGCTTGCACCTTTCGCACCT +
Preference number: 4 (lower is better)
Translates to: ARHLPHRAAVGIQFNSANFCPSW*LAPFAP
Trigger: AGGTGCGAAAGGTGCAAGGCACCAACTTGGGCAAAA...GTTTGCTGAATTGAATTGAATCCCCACGGCAGCTCTGTGAGGCAGGTGGCGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528964.5
ENST00000556575.5
CDS-3UTR GCA 90 bp AGGAAGATGCCCTCTCGCTCCAGATGCGTGAAGAGCTCGCCACCTGCCTCACAGTCATGGCATATATTTTaGCCAAGTTGGTGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: RKMPSRSRCVKSSPPASQSWHIF*PSWCLA
Trigger: TGCAAGGCACCAACTTGGGCAAAATATATGCCATGA...CTGTGAGGCAGGTGGCGAGCTCTTCACGCATCTGGAGCGAGAGGGCATCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528964.5
ENST00000556575.5
CDS-3UTR GCA 90 bp CACGTATGTGAAGCCCAGGAAGGCCTGGTTGGCACTCTCGCTGAGGGCTGTGTCTCCACAATAAAGGGGTaGTTCACTGACTCTAGAATG +
Preference number: 4 (lower is better)
Translates to: HVCEAQEGLVGTLAEGCVSTIKG*FTDSRM
Trigger: CATTCTAGAGTCAGTGAAGCACCCCTTTATTGTGGA...GACACAGCCCTCAGCGAGAGTGCCAACCAGGCCTTCCTGGGCTTCACATACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR GCA 90 bp GAGAAGCCCTCCTTGATGCTGTCCAGGACAGACGGCGCCACGTATGTGAAGCCCTCCACAATAAAGGGGTaGTTCACTGACTCTAGAATG +
Preference number: 4 (lower is better)
Translates to: EKPSLMLSRTDGATYVKPSTIKG*FTDSRM
Trigger: CATTCTAGAGTCAGTGAAGCACCCCTTTATTGTGGA...GGGCTTCACATACGTGGCGCCGTCTGTCCTGGACAGCATCAAGGAGGGCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR GCA 90 bp GTATCTTCCAGGAAGATGCCCTCTCGCTCCAGATGCGTGAAGAGCTCGCCACCTTCGTCCCAATTCATGTaGCGGAAAAAGGGATGTCTC +
Preference number: 4 (lower is better)
Translates to: VSSRKMPSRSRCVKSSPPSSQFM*RKKGCL
Trigger: GAGACATCCCTTTTTCCGGCACATGAATTGGGACGA...AGGTGGCGAGCTCTTCACGCATCTGGAGCGAGAGGGCATCTTCCTGGAAGATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528964.5
CDS-3UTR CCA 90 bp GGCTGGAAGGAGAAGCCCTCCTTGATGCTGTCCAGGACAGACGGCGCCACGTATCATTGCGCACAATTTTaGCCTTCCTTAGGACTTTCA +
Preference number: 4 (lower is better)
Translates to: GWKEKPSLMLSRTDGATYHCAQF*PSLGLS
Trigger: TGAAAGTCCTAAGGAAGGCCAAAATTGTGCGCAATG...ATACGTGGCGCCGTCTGTCCTGGACAGCATCAAGGAGGGCTTCTCCTTCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR CCA 90 bp AAGAGCTCGCCACCTGCCTCACAGAGCTGCCGTGGGGATTCAATTCAATTCAGCAGTTTGATGTGGCCCTaGCTGCTGAGCATGATGTTC +
Preference number: 4 (lower is better)
Translates to: KSSPPASQSCRGDSIQFSSLMWP*LLSMMF
Trigger: GAACATCATGCTCAGCAGCCAGGGCCACATCAAACT...GCTGAATTGAATTGAATCCCCACGGCAGCTCTGTGAGGCAGGTGGCGAGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528964.5
ENST00000556575.5
CDS-3UTR CCA 90 bp AAGGAGAAGCCCTCCTTGATGCTGTCCAGGACAGACGGCGCCACGTATGTGAAGATATTTTGCCCAAGTTaGTGCCTTGCACCTTTCGCA +
Preference number: 4 (lower is better)
Translates to: KEKPSLMLSRTDGATYVKIFCPS*CLAPFA
Trigger: TGCGAAAGGTGCAAGGCACCAACTTGGGCAAAATAT...CTTCACATACGTGGCGCCGTCTGTCCTGGACAGCATCAAGGAGGGCTTCTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR GCA 90 bp AAGGAGAAGCCCTCCTTGATGCTGTCCAGGACAGACGGCGCCACGTATGTGAAGTCATGGCATATATTTTaGCCAAGTTGGTGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: KEKPSLMLSRTDGATYVKSWHIF*PSWCLA
Trigger: TGCAAGGCACCAACTTGGGCAAAATATATGCCATGA...CTTCACATACGTGGCGCCGTCTGTCCTGGACAGCATCAAGGAGGGCTTCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR CCA 90 bp GTCGGTCAGTTTGATGTGGCCCTGGCTGCTGAGCATGATGTTCTCGGGCTTGAGCATTGCGCACAATTTTaGCCTTCCTTAGGACTTTCA +
Preference number: 4 (lower is better)
Translates to: VGQFDVALAAEHDVLGLEHCAQF*PSLGLS
Trigger: TGAAAGTCCTAAGGAAGGCCAAAATTGTGCGCAATG...CTCAAGCCCGAGAACATCATGCTCAGCAGCCAGGGCCACATCAAACTGACCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528964.5
ENST00000556575.5
CDS-3UTR CCA 90 bp AGCTCGCCACCTGCCTCACAGAGCTGCCGTGGGGATTCAATTCAATTCAGCAAAATATTTTGCCCAAGTTaGTGCCTTGCACCTTTCGCA +
Preference number: 4 (lower is better)
Translates to: SSPPASQSCRGDSIQFSKIFCPS*CLAPFA
Trigger: TGCGAAAGGTGCAAGGCACCAACTTGGGCAAAATAT...TTTGCTGAATTGAATTGAATCCCCACGGCAGCTCTGTGAGGCAGGTGGCGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528964.5
ENST00000556575.5
CDS-3UTR CCA 90 bp AGCTCGCCACCTGCCTCACAGAGCTGCCGTGGGGATTCAATTCAATTCAGCAAACATTGCGCACAATTTTaGCCTTCCTTAGGACTTTCA +
Preference number: 4 (lower is better)
Translates to: SSPPASQSCRGDSIQFSKHCAQF*PSLGLS
Trigger: TGAAAGTCCTAAGGAAGGCCAAAATTGTGCGCAATG...TTTGCTGAATTGAATTGAATCCCCACGGCAGCTCTGTGAGGCAGGTGGCGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528964.5
ENST00000556575.5
CDS-3UTR GCA 90 bp ATGATCTTATCCATGGTTTTCTTCCGGTTCTCTGCGGTGAAGGGCGGCGATCCATCATGGCATATATTTTaGCCAAGTTGGTGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: MILSMVFFRFSAVKGGDPSWHIF*PSWCLA
Trigger: TGCAAGGCACCAACTTGGGCAAAATATATGCCATGA...TGGATCGCCGCCCTTCACCGCAGAGAACCGGAAGAAAACCATGGATAAGATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS CCA 90 bp TCGGAGCCCGCTCTGGGCGTGCGGAGCCGCCGCTCCGGCCTCGGCTaGGTGACAGGATCGGCTCCAGGATCCAGTCGCGCCAGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: SEPALGVRSRRSGLG*VTGSAPGSSRARAG
Trigger: CCCTGCCCTGGCGCGACTGGATCCTGGAGCCGATCCTGTCACCCAGCCGAGGCCGGAGCGGCGGCTCCGCACGCCCAGAGCGGGCTCCGA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS CCA 90 bp CGCTGCCTTCCTCCGTCTCCAAATCCAAATCAAACACGGCCGCCATaGCGGCGCCGGCCCCGCGGGCCCGTCGGCCCGTACCTGGCCGCG +
Preference number: 5 (lower is better)
Translates to: RCLPPSPNPNQTRPP*RRRPRGPVGPYLAA
Trigger: CGCGGCCAGGTACGGGCCGACGGGCCCGCGGGGCCGGCGCCGCCATGGCGGCCGTGTTTGATTTGGATTTGGAGACGGAGGAAGGCAGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312629.10
ENST00000420069.3
ENST00000524814.5
ENST00000524934.5
ENST00000530623.5
ENST00000556575.5
CDS-3UTR CAA 90 bp CCTGCTGCTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACCCTCACCCCCACGCCCGGGGGCTACTGTaGAGGCGCCTGGGTGAGCGC +
Preference number: 5 (lower is better)
Translates to: PAALTAAGTGLKGYPHPHARGLL*RRLGER
Trigger: GCGCTCACCCAGGCGCCTCAACAGTAGCCCCCGGGC...GTGGGGGTGAGGGTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGCAGCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS-3UTR CAA 90 bp TCCACGGGAGCAGTTGAGCGCGGGGCGTGGCGGGCGGCCCTCCGTGCCCATGATGGGGGCAGTGCCAGCTaGCCCCTGATGATCTTATCC +
Preference number: 5 (lower is better)
Translates to: STGAVERGAWRAALRAHDGGSAS*PLMILS
Trigger: GGATAAGATCATCAGGGGCAAGCTGGCACTGCCCCC...ATCATGGGCACGGAGGGCCGCCCGCCACGCCCCGCGCTCAACTGCTCCCGTGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000312629.10
CDS-3UTR CAA 90 bp ATTCAGCCCTTTAATCTTCCACGGGAGCAGTTGAGCGCGGGGCGTGGCGGGCGGCTTCCACGGGAGCAGTaGAGCGCGGGGCGTGGCGGG +
Preference number: 5 (lower is better)
Translates to: IQPFNLPREQLSAGRGGRLPREQ*SAGRGG
Trigger: CCCGCCACGCCCCGCGCTCAACTGCTCCCGTGGAAG...CCGCCCGCCACGCCCCGCGCTCAACTGCTCCCGTGGAAGATTAAAGGGCTGAAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312629.10
CDS-3UTR CAA 90 bp CCTGCTGCTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACCCTCACCCCCACCCCAGGAAGGCCTGGTaGGCACTCTCGCTGAGGGCT +
Preference number: 5 (lower is better)
Translates to: PAALTAAGTGLKGYPHPHPRKAW*ALSLRA
Trigger: AGCCCTCAGCGAGAGTGCCAACCAGGCCTTCCTGGG...GTGGGGGTGAGGGTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGCAGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS GCA 90 bp CCAGAGGCTCCCAGCACTCAGTCAGGGAAGGCAGCCTTTCCCACCTaGCCAGGCACACAGGCCGCGGGCTCCACAAACTCCCATCCAGGC +
Preference number: 5 (lower is better)
Translates to: PEAPSTQSGKAAFPT*PGTQAAGSTNSHPG
Trigger: GCCTGGATGGGAGTTTGTGGAGCCCGCGGCCTGTGTGCCTGGGCAGGTGGGAAAGGCTGCCTTCCCTGACTGAGTGCTGGGAGCCTCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525088.5
ENST00000531765.2
CDS TCA 90 bp TCAGTACCTGACGGGGGCCCGGGGGCTACTGTTGAGGCGCCTGGGTaGGCGCAGCTTGGGCTGGAAGGAGAAGCCCTCCTTGATGCTGTC +
Preference number: 5 (lower is better)
Translates to: SVPDGGPGATVEAPG*AQLGLEGEALLDAV
Trigger: GACAGCATCAAGGAGGGCTTCTCCTTCCAGCCCAAGCTGCGCTCACCCAGGCGCCTCAACAGTAGCCCCCGGGCCCCCGTCAGGTACTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000525088.5
ENST00000531765.2
CDS GCA 90 bp CCCCCTTGCCCAGCACACGCAGCAGCTCAAAGCAGTGGGGCCCGATaGGCTCTGGGCCAACGTTCACGCTGGTCTCAGTCAGCTCCACCT +
Preference number: 5 (lower is better)
Translates to: PPCPAHAAAQSSGAR*ALGQRSRWSQSAPP
Trigger: AGGTGGAGCTGACTGAGACCAGCGTGAACGTTGGCCCAGAGCGCATCGGGCCCCACTGCTTTGAGCTGCTGCGTGTGCTGGGCAAGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000312629.10
ENST00000420069.3
ENST00000524814.5
ENST00000524934.5
ENST00000525088.5
ENST00000528964.5
ENST00000530623.5
ENST00000556575.5
CDS CCA 90 bp TCCTTGATGCTGTCCAGGACAGACGGCGCCACGTATGTGAAGCCCTaGGGGGCGGAGGCAGGGCCATGCGACACTCAGTGCCTGCCATCC +
Preference number: 5 (lower is better)
Translates to: SLMLSRTDGATYVKP*GAEAGPCDTQCLPS
Trigger: GGATGGCAGGCACTGAGTGTCGCATGGCCCTGCCTCCGCCCCCCAGGGCTTCACATACGTGGCGCCGTCTGTCCTGGACAGCATCAAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531765.2
CDS-3UTR CAA 90 bp GCTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACCCTCACCCCCACCCGGCTCCAAAGTCGGTCAGTTaGATGTGGCCCTGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: ALTAAGTGLKGYPHPHPAPKSVS*MWPWLL
Trigger: CAGCAGCCAGGGCCACATCAAACTGACCGACTTTGG...AGCCGGGTGGGGGTGAGGGTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS-3UTR CAA 90 bp GCTGCTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACCCTCACCCCCACCCGCCAAAGTCGGTCAGTTaGATGTGGCCCTGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: AALTAAGTGLKGYPHPHPPKSVS*MWPWLL
Trigger: CAGCAGCCAGGGCCACATCAAACTGACCGACTTTGG...CGGGTGGGGGTGAGGGTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS-3UTR CAA 90 bp CGTGTGAAGCGGGTATCAAACTGGCTCACGTCCTCCTCTGACTGCAGACAGGGCGCCCGGGGGCTACTGTaGAGGCGCCTGGGTGAGCGC +
Preference number: 5 (lower is better)
Translates to: RVKRVSNWLTSSSDCRQGARGLL*RRLGER
Trigger: GCGCTCACCCAGGCGCCTCAACAGTAGCCCCCGGGC...GCCCTGTCTGCAGTCAGAGGAGGACGTGAGCCAGTTTGATACCCGCTTCACACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS GCA 90 bp GCCGTGCCCCTTCGGGCTGTCCTCCCGACCCCTGGGCCAGCCAGGTaGCACTTACATGTACTCAATGGTGCCGCAGAAGGTGTGAGTGAC +
Preference number: 5 (lower is better)
Translates to: AVPLRAVLPTPGPAR*HLHVLNGAAEGVSD
Trigger: GTCACTCACACCTTCTGCGGCACCATTGAGTACATGTAAGTGGCACCTGGCTGGCCCAGGGGTCGGGAGGACAGCCCGAAGGGGCACGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS-3UTR CAA 90 bp CTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACCCTCACCCCCACCCGGCTTGCCCAAGTTGGTGCCTaGCACCTTTCGCACCTGGAA +
Preference number: 5 (lower is better)
Translates to: LSQPQGQGSRATLTPTRLAQVGA*HLSHLE
Trigger: TTCCAGGTGCGAAAGGTGCAAGGCACCAACTTGGGC...AAGCCGGGTGGGGGTGAGGGTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS CCA 90 bp GCTCAAAGCAGTGGGGCCCGATGCGCTCTGGGCCAACGTTCACGCTaGTCTCAGTCAGCTCCACCTCTTCATAGTGTCCCACAGGCCGCG +
Preference number: 5 (lower is better)
Translates to: AQSSGARCALGQRSR*SQSAPPLHSVPQAA
Trigger: CGCGGCCTGTGGGACACTATGAAGAGGTGGAGCTGACTGAGACCAGCGTGAACGTTGGCCCAGAGCGCATCGGGCCCCACTGCTTTGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420069.3
ENST00000530623.5
CDS CCA 90 bp CCCATGATAGACACAGCAACCGAAGCCAACACTGGCCGACAGACGTaGCCAAGGCACCCAAGGCTGGAGCTGGCATCCTGCCTGCCAGCG +
Preference number: 5 (lower is better)
Translates to: PMIDTATEANTGRQT*PRHPRLELASCLPA
Trigger: CGCTGGCAGGCAGGATGCCAGCTCCAGCCTTGGGTGCCTTGGCCACGTCTGTCGGCCAGTGTTGGCTTCGGTTGCTGTGTCTATCATGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525088.5
ENST00000531765.2
CDS GCA 90 bp CAGGAAGATGCCCTCTCGCTCCAGATGCGTGAAGAGCTCGCCACCTaGCACACAAACACGTCAGCAGCCACGTGCTGGGTCCAAGCCCCT +
Preference number: 5 (lower is better)
Translates to: QEDALSLQMREELAT*HTNTSAATCWVQAP
Trigger: AGGGGCTTGGACCCAGCACGTGGCTGCTGACGTGTTTGTGTGGCAGGTGGCGAGCTCTTCACGCATCTGGAGCGAGAGGGCATCTTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525088.5
ENST00000525726.1
CDS GCA 90 bp GGACATGCGTCCTGTGAGAAACCGAGGGGTAAGAGCCAAGGAAGGTaGCAGGATACCTCCCCGCTCCCGTTCAGGTTGGACTGCGTGGCC +
Preference number: 5 (lower is better)
Translates to: GHASCEKPRGKSQGR*QDTSPLPFRLDCVA
Trigger: GGCCACGCAGTCCAACCTGAACGGGAGCGGGGAGGTATCCTGGCACCTTCCTTGGCTCTTACCCCTCGGTTTCTCACAGGACGCATGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS-3UTR CAA 90 bp CTGCTGCTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACCCTCACCCCCACCGCTGTGTCCTTGGCATaGCGCACAATTTTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: LLLSQPQGQGSRATLTPTAVSLA*RTILAF
Trigger: GAAGGCCAAAATTGTGCGCAATGCCAAGGACACAGC...GGTGGGGGTGAGGGTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGCAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS-3UTR CAA 90 bp CCTGATGATCTTATCCATGGTTTTCTTCCGGTTCTCTGCGGTGAAGGGCGGCGAGCCCGGGGGCTACTGTaGAGGCGCCTGGGTGAGCGC +
Preference number: 5 (lower is better)
Translates to: PDDLIHGFLPVLCGEGRRARGLL*RRLGER
Trigger: GCGCTCACCCAGGCGCCTCAACAGTAGCCCCCGGGC...TCGCCGCCCTTCACCGCAGAGAACCGGAAGAAAACCATGGATAAGATCATCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS GCA 90 bp GGATCAGAACTTAATAGAGACCGGGATCTGAGAAGGATCTGGGTCTaGAAAGAGTCGGAGCCCGCTCTGGGCGTGCGGAGCCGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: GSELNRDRDLRRIWV*KESEPALGVRSRRS
Trigger: GGAGCGGCGGCTCCGCACGCCCAGAGCGGGCTCCGACTCTTTGCAGACCCAGATCCTTCTCAGATCCCGGTCTCTATTAAGTTCTGATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS CCA 90 bp GCTCAAAGCAGTGGGGCCCGATGCGCTCTGGGCCAACGTTCACGCTaGTCTCAGTCAGCTCCACCTCTTCATAGTGTCCCACAGGCCTAC +
Preference number: 5 (lower is better)
Translates to: AQSSGARCALGQRSR*SQSAPPLHSVPQAY
Trigger: GTAGGCCTGTGGGACACTATGAAGAGGTGGAGCTGACTGAGACCAGCGTGAACGTTGGCCCAGAGCGCATCGGGCCCCACTGCTTTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS CCA 90 bp CCCTGGTGGTGGTCCCAAACCCACCTGCACATCAGCAGCATCCCCTaGGCCACCCCCAATCCGCTGGCTGGGATTCCGTTTCAGAAACTT +
Preference number: 5 (lower is better)
Translates to: PWWWSQTHLHISSIP*ATPNPLAGIPFQKL
Trigger: AAGTTTCTGAAACGGAATCCCAGCCAGCGGATTGGGGGTGGCCCAGGGGATGCTGCTGATGTGCAGGTGGGTTTGGGACCACCACCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS-3UTR CAA 90 bp TGCTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACCCTCACCCCCACCCGGCGCATTGCGCACAATTTaGGCCTTCCTTAGGACTTTC +
Preference number: 5 (lower is better)
Translates to: CSHSRRDRAQGLPSPPPGALRTI*AFLRTF
Trigger: GAAAGTCCTAAGGAAGGCCAAAATTGTGCGCAATGC...GCCGGGTGGGGGTGAGGGTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS-3UTR CAA 90 bp CAGGAAGGCCTGGTTGGCACTCTCGCTGAGGGCTGTGTCATCAGGACTGTCCACGGGGGCAGTGCCAGCTaGCCCCTGATGATCTTATCC +
Preference number: 5 (lower is better)
Translates to: QEGLVGTLAEGCVIRTVHGGSAS*PLMILS
Trigger: GGATAAGATCATCAGGGGCAAGCTGGCACTGCCCCC...GTGGACAGTCCTGATGACACAGCCCTCAGCGAGAGTGCCAACCAGGCCTTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR CAA 90 bp GCCCTCCTTGATGCTGTCCAGGACAGACGGCGCCACGTATGTGAAGCCCAGGAAGGGGGCAGTGCCAGCTaGCCCCTGATGATCTTATCC +
Preference number: 5 (lower is better)
Translates to: ALLDAVQDRRRHVCEAQEGGSAS*PLMILS
Trigger: GGATAAGATCATCAGGGGCAAGCTGGCACTGCCCCC...TTCCTGGGCTTCACATACGTGGCGCCGTCTGTCCTGGACAGCATCAAGGAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS TCA 90 bp AGCAGGCCGTATCTTCCAGGAAGATGCCCTCTCGCTCCAGATGCGTaGAGAGCTCGCCACCTGCCACACAAACACGTCAGCAGCCACGTG +
Preference number: 5 (lower is better)
Translates to: SRPYLPGRCPLAPDA*RARHLPHKHVSSHV
Trigger: CACGTGGCTGCTGACGTGTTTGTGTGGCAGGTGGCGAGCTCTTCACGCATCTGGAGCGAGAGGGCATCTTCCTGGAAGATACGGCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525088.5
ENST00000525726.1
CDS GCA 90 bp CCTGTGCTGGGTGAAGCTGGGGACAGGATGAAGAGACCCAGCCACTaGCCTCAGGACGCTCAGTCTACACTGAGGCACTCAAGGATGAGG +
Preference number: 5 (lower is better)
Translates to: PVLGEAGDRMKRPSH*PQDAQSTLRHSRMR
Trigger: CCTCATCCTTGAGTGCCTCAGTGTAGACTGAGCGTCCTGAGGGCAGTGGCTGGGTCTCTTCATCCTGTCCCCAGCTTCACCCAGCACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528964.5
CDS CCA 90 bp GCTCAAAGCAGTGGGGCCCGATGCGCTCTGGGCCAACGTTCACGCTaGTCTCAGTCAGCTCCACCTCTTCATAGTGTCCCACAGGCTCTA +
Preference number: 5 (lower is better)
Translates to: AQSSGARCALGQRSR*SQSAPPLHSVPQAL
Trigger: TAGAGCCTGTGGGACACTATGAAGAGGTGGAGCTGACTGAGACCAGCGTGAACGTTGGCCCAGAGCGCATCGGGCCCCACTGCTTTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312629.10
ENST00000524814.5
ENST00000524934.5
ENST00000528964.5
ENST00000556575.5
CDS CCA 90 bp AGGGTGGGATCAGAACTTAATAGAGACCGGGATCTGAGAAGGATCTaGGTCTGCAAAGAGTCGGAGCCCGCTCTGGGCGTGCGGAGCCGC +
Preference number: 5 (lower is better)
Translates to: RVGSELNRDRDLRRI*VCKESEPALGVRSR
Trigger: GCGGCTCCGCACGCCCAGAGCGGGCTCCGACTCTTTGCAGACCCAGATCCTTCTCAGATCCCGGTCTCTATTAAGTTCTGATCCCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS CCA 90 bp CGGAGCGAATGCAGAGCATGGAGGCAGAAGCTCGCAGGGTTCATCTaGCCCAAACGAGGGAAAGGCAGGTCAAGACTGCTCACAGCCTGC +
Preference number: 5 (lower is better)
Translates to: RSECRAWRQKLAGFI*PKRGKGRSRLLTAC
Trigger: GCAGGCTGTGAGCAGTCTTGACCTGCCTTTCCCTCGTTTGGGCCAGATGAACCCTGCGAGCTTCTGCCTCCATGCTCTGCATTCGCTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS-3UTR CAA 90 bp GCCCAGGGTCCTGCTGCTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACCCTTATATTTTGCCCAAGTaGGTGCCTTGCACCTTTCGC +
Preference number: 5 (lower is better)
Translates to: AQGPAALTAAGTGLKGYPYILPK*VPCTFR
Trigger: GCGAAAGGTGCAAGGCACCAACTTGGGCAAAATATA...AGGGTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGCAGCAGGACCCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS-3UTR CAA 90 bp TGGCGGGCGGCCCTCCGTGCCCATGATTCAGGGGCACAGCTGCCCCAGCAGACATTCATGGCATATATTTaGCCCAAGTTGGTGCCTTGC +
Preference number: 5 (lower is better)
Translates to: WRAALRAHDSGAQLPQQTFMAYI*PKLVPC
Trigger: GCAAGGCACCAACTTGGGCAAAATATATGCCATGAA...TGTCTGCTGGGGCAGCTGTGCCCCTGAATCATGGGCACGGAGGGCCGCCCGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312629.10
CDS-3UTR CAA 90 bp CCTGCTGCTCTCACAGCCGCAGGGACAGGGCTCAAGGGCTACCCTCACCCCCACCGTTTCAGAAACTTTTaGACAAGGTCCCGGGCATCT +
Preference number: 5 (lower is better)
Translates to: PAALTAAGTGLKGYPHPHRFRNF*TRSRAS
Trigger: AGATGCCCGGGACCTTGTCAAAAAGTTTCTGAAACG...GTGGGGGTGAGGGTAGCCCTTGAGCCCTGTCCCTGCGGCTGTGAGAGCAGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000528964.5
CDS-3UTR CAA 90 bp CCACCCGGCTTCCTAGCGCCCTGGACGCCCACGGCCCCTCTTGGACTTCTTGGTCGTTTCAGAAACTTTTaGACAAGGTCCCGGGCATCT +
Preference number: 5 (lower is better)
Translates to: PPGFLAPWTPTAPLGLLGRFRNF*TRSRAS
Trigger: AGATGCCCGGGACCTTGTCAAAAAGTTTCTGAAACG...ACCAAGAAGTCCAAGAGGGGCCGTGGGCGTCCAGGGCGCTAGGAAGCCGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528964.5
CDS-3UTR CAA 90 bp CTTATCCATGGTTTTCTTCCGGTTCTCTGCGGTGAAGGGCGGCGATCCAGTGAGCCCAGGAAGGCCTGGTaGGCACTCTCGCTGAGGGCT +
Preference number: 5 (lower is better)
Translates to: LIHGFLPVLCGEGRRSSEPRKAW*ALSLRA
Trigger: AGCCCTCAGCGAGAGTGCCAACCAGGCCTTCCTGGG...CTCACTGGATCGCCGCCCTTCACCGCAGAGAACCGGAAGAAAACCATGGATAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS TCA 90 bp CACAAACTCCCATCCAGGCAGCCTGGCCACAAGGGGTGTAGGAACTaGGGTCCCCATGATAGACACAGCAACCGAAGCCAACACTGGCCG +
Preference number: 5 (lower is better)
Translates to: HKLPSRQPGHKGCRN*GPHDRHSNRSQHWP
Trigger: CGGCCAGTGTTGGCTTCGGTTGCTGTGTCTATCATGGGGACCTCAGTTCCTACACCCCTTGTGGCCAGGCTGCCTGGATGGGAGTTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525088.5
ENST00000531765.2
CDS GCA 90 bp GCACTACTGACACCTGGGACCAGGTCATTCTTTGTTGTGGGAGGCTaGCCTGCGCATCGTGGGATGTTCAGCAGCATCCCTGGTCTCCAC +
Preference number: 5 (lower is better)
Translates to: ALLTPGTRSFFVVGG*PAHRGMFSSIPGLH
Trigger: GTGGAGACCAGGGATGCTGCTGAACATCCCACGATGCGCAGGGCAGCCTCCCACAACAAAGAATGACCTGGTCCCAGGTGTCAGTAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS-3UTR CAA 90 bp CTGTCCAGGACAGACGGCGCCACGTATGTGAAGCCCAGGAAGGCCTGGTTGGCAGCTGTGTCCTTGGCATaGCGCACAATTTTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: LSRTDGATYVKPRKAWLAAVSLA*RTILAF
Trigger: GAAGGCCAAAATTGTGCGCAATGCCAAGGACACAGC...TGCCAACCAGGCCTTCCTGGGCTTCACATACGTGGCGCCGTCTGTCCTGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR CAA 90 bp CCTGATGATCTTATCCATGGTTTTCTTCCGGTTCTCTGCGGTGAAGGGCGGCGACCCAGGAAGGCCTGGTaGGCACTCTCGCTGAGGGCT +
Preference number: 5 (lower is better)
Translates to: PDDLIHGFLPVLCGEGRRPRKAW*ALSLRA
Trigger: AGCCCTCAGCGAGAGTGCCAACCAGGCCTTCCTGGG...TCGCCGCCCTTCACCGCAGAGAACCGGAAGAAAACCATGGATAAGATCATCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR CAA 90 bp ATGCTGTCCAGGACAGACGGCGCCACGTATGTGAAGCCCAGGAAGGCCTGGTTGCCAAAGTCGGTCAGTTaGATGTGGCCAGGCCGTATC +
Preference number: 5 (lower is better)
Translates to: MLSRTDGATYVKPRKAWLPKSVS*MWPGRI
Trigger: GATACGGCCTGGCCACATCAAACTGACCGACTTTGG...CAACCAGGCCTTCCTGGGCTTCACATACGTGGCGCCGTCTGTCCTGGACAGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525996.7
CDS-3UTR CAA 90 bp GTCCACACGCCAGGCCAGAAGGTCGTCCCAATTCATGTGCCGGAAAAAGGGATGGCCCAAGTTGGTGCCTaGCACCTTTCGCACCTGGAA +
Preference number: 5 (lower is better)
Translates to: VHTPGQKVVPIHVPEKGMAQVGA*HLSHLE
Trigger: TTCCAGGTGCGAAAGGTGCAAGGCACCAACTTGGGC...CATCCCTTTTTCCGGCACATGAATTGGGACGACCTTCTGGCCTGGCGTGTGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR CAA 90 bp AGGAAGATGCCCTCTCGCTCCAGATGCGTGAAGAGCTCGCCACCTGCCTCACAGGCTGTGTCCTTGGCATaGCGCACAATTTTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: RKMPSRSRCVKSSPPASQAVSLA*RTILAF
Trigger: GAAGGCCAAAATTGTGCGCAATGCCAAGGACACAGC...CTGTGAGGCAGGTGGCGAGCTCTTCACGCATCTGGAGCGAGAGGGCATCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528964.5
ENST00000556575.5
CDS-3UTR CAA 90 bp GTCGGTCAGTTTGATGTGGCCCTGGCTGCTGAGCATGATGTTCTCGGGCTTGAGCCAAAGTCGGTCAGTTaGATGTGGCCCTGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: VGQFDVALAAEHDVLGLEPKSVS*MWPWLL
Trigger: CAGCAGCCAGGGCCACATCAAACTGACCGACTTTGG...CTCAAGCCCGAGAACATCATGCTCAGCAGCCAGGGCCACATCAAACTGACCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528964.5
ENST00000556575.5
CDS TCA 90 bp ATGGAGGAGGACACTACAGAGAATGAACCAGTTGGGCTGGGGACCTaGCAGGATGCAGGGCACACGGGAGAGAAGAACAAGACAGGGAGG +
Preference number: 5 (lower is better)
Translates to: MEEDTTENEPVGLGT*QDAGHTGEKNKTGR
Trigger: CCTCCCTGTCTTGTTCTTCTCTCCCGTGTGCCCTGCATCCTGTCAGGTCCCCAGCCCAACTGGTTCATTCTCTGTAGTGTCCTCCTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS CCA 90 bp GTGGACGGATGGAGGAGGACACTACAGAGAATGAACCAGTTGGGCTaGGGACCTGACAGGATGCAGGGCACACGGGAGAGAAGAACAAGA +
Preference number: 5 (lower is better)
Translates to: VDGWRRTLQRMNQLG*GPDRMQGTRERRTR
Trigger: TCTTGTTCTTCTCTCCCGTGTGCCCTGCATCCTGTCAGGTCCCCAGCCCAACTGGTTCATTCTCTGTAGTGTCCTCCTCCATCCGTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS-3UTR CAA 90 bp CTTATCCATGGTTTTCTTCCGGTTCTCTGCGGTGAAGGGCGGCGATCCAGTGAGGCCCAAGTTGGTGCCTaGCACCTTTCGCACCTGGAA +
Preference number: 5 (lower is better)
Translates to: LIHGFLPVLCGEGRRSSEAQVGA*HLSHLE
Trigger: TTCCAGGTGCGAAAGGTGCAAGGCACCAACTTGGGC...CTCACTGGATCGCCGCCCTTCACCGCAGAGAACCGGAAGAAAACCATGGATAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS TCA 90 bp CAGCCAGGTGCCACTTACATGTACTCAATGGTGCCGCAGAAGGTGTaGGTGACGGCGCCCTCATGGATAGACTCCTTGCAGAGTCCAAAG +
Preference number: 5 (lower is better)
Translates to: QPGATYMYSMVPQKV*VTAPSWIDSLQSPK
Trigger: CTTTGGACTCTGCAAGGAGTCTATCCATGAGGGCGCCGTCACTCACACCTTCTGCGGCACCATTGAGTACATGTAAGTGGCACCTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS GCA 90 bp AACCAGCAAACGCCAAAGTCAGGGATCCTCCTCCACTGTGTTCCCTaGTGTCTTCCCAAAGCCTGGTACAGCATGTTGGGAATGGCAGCC +
Preference number: 5 (lower is better)
Translates to: NQQTPKSGILLHCVP*CLPKAWYSMLGMAA
Trigger: GGCTGCCATTCCCAACATGCTGTACCAGGCTTTGGGAAGACAGCAGGGAACACAGTGGAGGAGGATCCCTGACTTTGGCGTTTGCTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS CCA 90 bp TGGGAAGAAACCGAAGGCAGGAAAGGGAGAATCGGGAGAAAAGGCTaGGGTTCTGGAAGAGAGGTCGGGGTGAGGGTGGGATCAGAACTT +
Preference number: 5 (lower is better)
Translates to: WEETEGRKGRIGRKG*GSGREVGVRVGSEL
Trigger: AAGTTCTGATCCCACCCTCACCCCGACCTCTCTTCCAGAACCCCAGCCTTTTCTCCCGATTCTCCCTTTCCTGCCTTCGGTTTCTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS CCA 90 bp AACAGAGAAAGCGCGGTTTGCTGGGACTTTAAGGGGATGCTGAGATaGACGGAGCGAATGCAGAGCATGGAGGCAGAAGCTCGCAGGGTT +
Preference number: 5 (lower is better)
Translates to: NRESAVCWDFKGMLR*TERMQSMEAEARRV
Trigger: AACCCTGCGAGCTTCTGCCTCCATGCTCTGCATTCGCTCCGTCCATCTCAGCATCCCCTTAAAGTCCCAGCAAACCGCGCTTTCTCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS-3UTR CAA 90 bp AGCTCGCCACCTGCCTCACAGAGCTGCCGTGGGGATTCAATTCAATTCAGCAAAGCCCAAGTTGGTGCCTaGCACCTTTCGCACCTGGAA +
Preference number: 5 (lower is better)
Translates to: SSPPASQSCRGDSIQFSKAQVGA*HLSHLE
Trigger: TTCCAGGTGCGAAAGGTGCAAGGCACCAACTTGGGC...TTTGCTGAATTGAATTGAATCCCCACGGCAGCTCTGTGAGGCAGGTGGCGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528964.5
ENST00000556575.5
CDS-3UTR CAA 90 bp TTCTCTGCGGTGAAGGGCGGCGATCCAGTGAGCATGTCGTACATCAGGGCCCCCTTCATGGCATATATTTaGCCCAAGTTGGTGCCTTGC +
Preference number: 5 (lower is better)
Translates to: FSAVKGGDPVSMSYIRAPFMAYI*PKLVPC
Trigger: GCAAGGCACCAACTTGGGCAAAATATATGCCATGAA...GGGGGCCCTGATGTACGACATGCTCACTGGATCGCCGCCCTTCACCGCAGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR CAA 90 bp TCCACCGGCGTCTGCCGTGTGAAGCGGGTATCAAACTGGCTCACGTCCTCCTCTGCATTGCGCACAATTTaGGCCTTCCTTAGGACTTTC +
Preference number: 5 (lower is better)
Translates to: STGVCRVKRVSNWLTSSSALRTI*AFLRTF
Trigger: GAAAGTCCTAAGGAAGGCCAAAATTGTGCGCAATGC...AGAGGAGGACGTGAGCCAGTTTGATACCCGCTTCACACGGCAGACGCCGGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR CAA 90 bp GGCCGTATCTTCCAGGAAGATGCCCTCTCGCTCCAGATGCGTGAAGAGCTCGCCGCATTGCGCACAATTTaGGCCTTCCTTAGGACTTTC +
Preference number: 5 (lower is better)
Translates to: GRIFQEDALSLQMREELAALRTI*AFLRTF
Trigger: GAAAGTCCTAAGGAAGGCCAAAATTGTGCGCAATGC...GGCGAGCTCTTCACGCATCTGGAGCGAGAGGGCATCTTCCTGGAAGATACGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528964.5
ENST00000556575.5
CDS-3UTR CAA 90 bp GAGAAGCCCTCCTTGATGCTGTCCAGGACAGACGGCGCCACGTATGTGAAGCCCCGTTTCAGAAACTTTTaGACAAGGTCCCGGGCATCT +
Preference number: 5 (lower is better)
Translates to: EKPSLMLSRTDGATYVKPRFRNF*TRSRAS
Trigger: AGATGCCCGGGACCTTGTCAAAAAGTTTCTGAAACG...GGGCTTCACATACGTGGCGCCGTCTGTCCTGGACAGCATCAAGGAGGGCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS GCA 90 bp GAAGAGACTCAACCATCCTCTGGACTTCTATCCAAATTCGCACCATaGCCATCCACCCCCAACACACGTGAGGGACACAGTAGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: EETQPSSGLLSKFAP*PSTPNTREGHSRCW
Trigger: CCAGCACCTACTGTGTCCCTCACGTGTGTTGGGGGTGGATGGGCATGGTGCGAATTTGGATAGAAGTCCAGAGGATGGTTGAGTCTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS-3UTR CAA 90 bp CTTATCCATGGTTTTCTTCCGGTTCTCTGCGGTGAAGGGCGGCGATCCAGTGAGGCTGTGTCCTTGGCATaGCGCACAATTTTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: LIHGFLPVLCGEGRRSSEAVSLA*RTILAF
Trigger: GAAGGCCAAAATTGTGCGCAATGCCAAGGACACAGC...CTCACTGGATCGCCGCCCTTCACCGCAGAGAACCGGAAGAAAACCATGGATAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR CAA 90 bp GGTCCACACGCCAGGCCAGAAGGTCGTCCCAATTCATGTGCCGGAAAAAGGGATGCATTGCGCACAATTTaGGCCTTCCTTAGGACTTTC +
Preference number: 5 (lower is better)
Translates to: GPHARPEGRPNSCAGKRDALRTI*AFLRTF
Trigger: GAAAGTCCTAAGGAAGGCCAAAATTGTGCGCAATGC...ATCCCTTTTTCCGGCACATGAATTGGGACGACCTTCTGGCCTGGCGTGTGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS-3UTR CAA 90 bp GTATCTTCCAGGAAGATGCCCTCTCGCTCCAGATGCGTGAAGAGCTCGCCACCTTTCATGGCATATATTTaGCCCAAGTTGGTGCCTTGC +
Preference number: 5 (lower is better)
Translates to: VSSRKMPSRSRCVKSSPPFMAYI*PKLVPC
Trigger: GCAAGGCACCAACTTGGGCAAAATATATGCCATGAA...AGGTGGCGAGCTCTTCACGCATCTGGAGCGAGAGGGCATCTTCCTGGAAGATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528964.5
ENST00000556575.5
CDS GCA 90 bp GTGAAGAGCTCGCCACCTTCCTTAGGACTTTCATGGCATATATTTTaGCCAAGTTGGTGCCTTGCACCTTTCGCACCTGGAACACCTTGC +
Preference number: 5 (lower is better)
Translates to: VKSSPPSLGLSWHIF*PSWCLAPFAPGTPC
Trigger: GCAAGGTGTTCCAGGTGCGAAAGGTGCAAGGCACCAACTTGGGCAAAATATATGCCATGAAAGTCCTAAGGAAGGTGGCGAGCTCTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524814.5
CDS-3UTR CAA 90 bp CCCCCAATCCGCTGGCTGGGATTCCGTTTCAGAAACTTTTTGACAAGGTCCCGGTTCATGGCATATATTTaGCCCAAGTTGGTGCCTTGC +
Preference number: 5 (lower is better)
Translates to: PPIRWLGFRFRNFLTRSRFMAYI*PKLVPC
Trigger: GCAAGGCACCAACTTGGGCAAAATATATGCCATGAA...CCGGGACCTTGTCAAAAAGTTTCTGAAACGGAATCCCAGCCAGCGGATTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000525996.7
ENST00000528964.5
CDS GCA 90 bp CTCAGCCAGGTAGAAGCTTCCTTAGGACTTTCATGGCATATATTTTaGCCAAGTTGGTGCCTTGCACCTTTCGCACCTGGAACACCTTGC +
Preference number: 5 (lower is better)
Translates to: LSQVEASLGLSWHIF*PSWCLAPFAPGTPC
Trigger: GCAAGGTGTTCCAGGTGCGAAAGGTGCAAGGCACCAACTTGGGCAAAATATATGCCATGAAAGTCCTAAGGAAGCTTCTACCTGGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420069.3
CDS GCA 90 bp TGCGCACAATTTTGGCCTTCCTTAGGACTTTCATGGCATATATTTTaGCCAAGTTGGTGCCTTGCACCTTTCGCACCTGGAACACCTTGC +
Preference number: 5 (lower is better)
Translates to: CAQFWPSLGLSWHIF*PSWCLAPFAPGTPC
Trigger: GCAAGGTGTTCCAGGTGCGAAAGGTGCAAGGCACCAACTTGGGCAAAATATATGCCATGAAAGTCCTAAGGAAGGCCAAAATTGTGCGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312629.10
ENST00000524934.5
ENST00000528964.5
ENST00000530623.5
ENST00000556575.5
CDS GCA 90 bp GGGGCAACCAGAGCTCCTCAGACCATCCATCTGTTTGTTAACTGCTaGATCCTCTGTCACTGCATTGTATTTCTCCATAATTCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: GATRAPQTIHLFVNC*ILCHCIVFLHNSAA
Trigger: AGCAGCAGAATTATGGAGAAATACAATGCAGTGACAGAGGATGCAGCAGTTAACAAACAGATGGATGGTCTGAGGAGCTCTGGTTGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS GCA 90 bp ATGGGGGCAACCAGAGCTCCTCAGACCATCCATCTGTTTGTTAACTaGTGCATCCTCTGTCACTGCATTGTATTTCTCCATAATTCTGCT +
Preference number: 5 (lower is better)
Translates to: MGATRAPQTIHLFVN*CILCHCIVFLHNSA
Trigger: AGCAGAATTATGGAGAAATACAATGCAGTGACAGAGGATGCAGCAGTTAACAAACAGATGGATGGTCTGAGGAGCTCTGGTTGCCCCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS GCA 90 bp CCTCAGACCATCCATCTGTTTGTTAACTGCTGCATCCTCTGTCACTaGATTGTATTTCTCCATAATTCTGCTGCTGTCAGCCACCATCAT +
Preference number: 5 (lower is better)
Translates to: PQTIHLFVNCCILCH*IVFLHNSAAVSHHH
Trigger: ATGATGGTGGCTGACAGCAGCAGAATTATGGAGAAATACAATGCAGTGACAGAGGATGCAGCAGTTAACAAACAGATGGATGGTCTGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS CCA 72 bp GCTCTGGGCGTGCGGAGCCGCCGCTCCGGCCTCGGCTaGGTGACAGGATCGGCTCCAGGATCCAGTCGCGCC +
Preference number: 6 (lower is better)
Translates to: ALGVRSRRSGLG*VTGSAPGSSRA
Trigger: GGCGCGACTGGATCCTGGAGCCGATCCTGTCACCCAGCCGAGGCCGGAGCGGCGGCTCCGCACGCCCAGAGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS GCA 72 bp GGCCCTGGGGTCCAGGTGGAACTGTCAGTCAGGCCGTaGCCCTTCGGGCTGTCCTCCCGACCCCTGGGCCAG +
Preference number: 6 (lower is better)
Translates to: GPGVQVELSVRP*PFGLSSRPLGQ
Trigger: CTGGCCCAGGGGTCGGGAGGACAGCCCGAAGGGGCACGGCCTGACTGACAGTTCCACCTGGACCCCAGGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS CCA 72 bp CCTCCGTCTCCAAATCCAAATCAAACACGGCCGCCATaGCGGCGCCGGCCCCGCGGGCCCGTCGGCCCGTAC +
Preference number: 6 (lower is better)
Translates to: PPSPNPNQTRPP*RRRPRGPVGPY
Trigger: GTACGGGCCGACGGGCCCGCGGGGCCGGCGCCGCCATGGCGGCCGTGTTTGATTTGGATTTGGAGACGGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312629.10
ENST00000420069.3
ENST00000524814.5
ENST00000524934.5
ENST00000525088.5
ENST00000528964.5
ENST00000530623.5
ENST00000556575.5
CDS CCA 72 bp GAAGGATCTGGGTCTGCAAAGAGTCGGAGCCCGCTCTaGGCGTGCGGAGCCGCCGCTCCGGCCTCGGCTGGG +
Preference number: 6 (lower is better)
Translates to: EGSGSAKSRSPL*ACGAAAPASAG
Trigger: CCCAGCCGAGGCCGGAGCGGCGGCTCCGCACGCCCAGAGCGGGCTCCGACTCTTTGCAGACCCAGATCCTTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS TCA 72 bp CCCCGCGGGCCCGTCGGCCCGTACCTGGCCGCGCACTaGCTGACAGTCCCGGACCTAAACATCATCTCTCCG +
Preference number: 6 (lower is better)
Translates to: PRGPVGPYLAAH*LTVPDLNIISP
Trigger: CGGAGAGATGATGTTTAGGTCCGGGACTGTCAGTCAGTGCGCGGCCAGGTACGGGCCGACGGGCCCGCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530623.5
CDS CAA 72 bp GTCCCTCAGTACCTGACGGGGGCCCGGGGGCTACTGTaGAGGCGCCTGGGTGAGCGCAGCTTGGGCTGGAAG +
Preference number: 6 (lower is better)
Translates to: VPQYLTGARGLL*RRLGERSLGWK
Trigger: CTTCCAGCCCAAGCTGCGCTCACCCAGGCGCCTCAACAGTAGCCCCCGGGCCCCCGTCAGGTACTGAGGGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000525088.5
ENST00000531765.2
CDS CCA 72 bp CTGTCCAGGACAGACGGCGCCACGTATGTGAAGCCCTaGGGGGCGGAGGCAGGGCCATGCGACACTCAGTGC +
Preference number: 6 (lower is better)
Translates to: LSRTDGATYVKP*GAEAGPCDTQC
Trigger: GCACTGAGTGTCGCATGGCCCTGCCTCCGCCCCCCAGGGCTTCACATACGTGGCGCCGTCTGTCCTGGACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531765.2
CDS GCA 72 bp CCCAGCACTCAGTCAGGGAAGGCAGCCTTTCCCACCTaGCCAGGCACACAGGCCGCGGGCTCCACAAACTCC +
Preference number: 6 (lower is better)
Translates to: PSTQSGKAAFPT*PGTQAAGSTNS
Trigger: GGAGTTTGTGGAGCCCGCGGCCTGTGTGCCTGGGCAGGTGGGAAAGGCTGCCTTCCCTGACTGAGTGCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525088.5
ENST00000531765.2
CDS GCA 72 bp CGACACTCAGTGCCTGCCATCCTTAGTCACGATCCGTaGCCTGGTCCCACAGGCCTCAGGCCCCCGCACTCA +
Preference number: 6 (lower is better)
Translates to: RHSVPAILSHDP*PGPTGLRPPHS
Trigger: TGAGTGCGGGGGCCTGAGGCCTGTGGGACCAGGGCACGGATCGTGACTAAGGATGGCAGGCACTGAGTGTCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531765.2
CDS CAA 72 bp GGAAGGTGCCAGGATACCTCCCCGCTCCCGTTCAGGTaGGACTGCGTGGCCCAGGAGAGAAGGGTGTCAGGG +
Preference number: 6 (lower is better)
Translates to: GRCQDTSPLPFR*DCVAQERRVSG
Trigger: CCCTGACACCCTTCTCTCCTGGGCCACGCAGTCCAACCTGAACGGGAGCGGGGAGGTATCCTGGCACCTTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS CAA 90 bp AGGCGCCTGGGTGAGCGCAGCTTGGGCTGGAAGGAGAAGCCCTCCTaGATGCTGTCCAGGACAGACGGCGCCACGTATGTGAAGCCCTGG +
Preference number: 6 (lower is better)
Translates to: RRLGERSLGWKEKPS*MLSRTDGATYVKPW
Trigger: CCAGGGCTTCACATACGTGGCGCCGTCTGTCCTGGACAGCATCAAGGAGGGCTTCTCCTTCCAGCCCAAGCTGCGCTCACCCAGGCGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531765.2
CDS TCA 72 bp CCGCACTCACCAGGAAGGCCTGGTTGGCACTCTCGCTaGGGGCTGTGTCATCAGGACTGTCCACCGGCGTCT +
Preference number: 6 (lower is better)
Translates to: PHSPGRPGWHSR*GLCHQDCPPAS
Trigger: AGACGCCGGTGGACAGTCCTGATGACACAGCCCTCAGCGAGAGTGCCAACCAGGCCTTCCTGGTGAGTGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531765.2
CDS GCA 72 bp GCCCTCTCGCTCCAGATGCGTGAAGAGCTCGCCACCTaGCACACAAACACGTCAGCAGCCACGTGCTGGGTC +
Preference number: 6 (lower is better)
Translates to: ALSLQMREELAT*HTNTSAATCWV
Trigger: GACCCAGCACGTGGCTGCTGACGTGTTTGTGTGGCAGGTGGCGAGCTCTTCACGCATCTGGAGCGAGAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525088.5
ENST00000525726.1
CDS CCA 72 bp GAAGGTGCCAGGATACCTCCCCGCTCCCGTTCAGGTTaGACTGCGTGGCCCAGGAGAGAAGGGTGTCAGGGA +
Preference number: 6 (lower is better)
Translates to: EGARIPPRSRSG*TAWPRREGCQG
Trigger: TCCCTGACACCCTTCTCTCCTGGGCCACGCAGTCCAACCTGAACGGGAGCGGGGAGGTATCCTGGCACCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS CCA 72 bp GACACAGCAACCGAAGCCAACACTGGCCGACAGACGTaGCCAAGGCACCCAAGGCTGGAGCTGGCATCCTGC +
Preference number: 6 (lower is better)
Translates to: DTATEANTGRQT*PRHPRLELASC
Trigger: GCAGGATGCCAGCTCCAGCCTTGGGTGCCTTGGCCACGTCTGTCGGCCAGTGTTGGCTTCGGTTGCTGTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525088.5
ENST00000531765.2
CDS CCA 72 bp TGGTCCCAAACCCACCTGCACATCAGCAGCATCCCCTaGGCCACCCCCAATCCGCTGGCTGGGATTCCGTTT +
Preference number: 6 (lower is better)
Translates to: WSQTHLHISSIP*ATPNPLAGIPF
Trigger: AAACGGAATCCCAGCCAGCGGATTGGGGGTGGCCCAGGGGATGCTGCTGATGTGCAGGTGGGTTTGGGACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS CCA 72 bp TTCCCGGCACCCTTGGAGACTCAGCCCTACCCCTGGTaGTGGTCCCAAACCCACCTGCACATCAGCAGCATC +
Preference number: 6 (lower is better)
Translates to: FPAPLETQPYPW*WSQTHLHISSI
Trigger: GATGCTGCTGATGTGCAGGTGGGTTTGGGACCACCACCAGGGGTAGGGCTGAGTCTCCAAGGGTGCCGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS GCA 72 bp GGTGAAGCTGGGGACAGGATGAAGAGACCCAGCCACTaGCCTCAGGACGCTCAGTCACTGAGGCACTCAAGG +
Preference number: 6 (lower is better)
Translates to: GEAGDRMKRPSH*PQDAQSLRHSR
Trigger: CCTTGAGTGCCTCAGTGACTGAGCGTCCTGAGGGCAGTGGCTGGGTCTCTTCATCCTGTCCCCAGCTTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556575.5
CDS CCA 72 bp AGTGGGGCCCGATGCGCTCTGGGCCAACGTTCACGCTaGTCTCAGTCAGCTCCACCTCTTCATAGTGTCCCA +
Preference number: 6 (lower is better)
Translates to: SGARCALGQRSR*SQSAPPLHSVP
Trigger: TGGGACACTATGAAGAGGTGGAGCTGACTGAGACCAGCGTGAACGTTGGCCCAGAGCGCATCGGGCCCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312629.10
ENST00000420069.3
ENST00000524814.5
ENST00000524934.5
ENST00000525088.5
ENST00000528964.5
ENST00000530623.5
ENST00000556575.5
CDS CCA 72 bp TCTGGCCACCCCACCAGGCCCCTGAGAGTGGACGGATaGAGGAGGACACTACAGAGAATGAACCAGTTGGGC +
Preference number: 6 (lower is better)
Translates to: SGHPTRPLRVDG*RRTLQRMNQLG
Trigger: GCCCAACTGGTTCATTCTCTGTAGTGTCCTCCTCCATCCGTCCACTCTCAGGGGCCTGGTGGGGTGGCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS CCA 72 bp GGTCCCCATGATAGACACAGCAACCGAAGCCAACACTaGCCGACAGACGTGGCCAAGGCACCCAAGGCTGGA +
Preference number: 6 (lower is better)
Translates to: GPHDRHSNRSQH*PTDVAKAPKAG
Trigger: TCCAGCCTTGGGTGCCTTGGCCACGTCTGTCGGCCAGTGTTGGCTTCGGTTGCTGTGTCTATCATGGGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525088.5
ENST00000531765.2
CDS GCA 72 bp GCCGTATCTTCCAGGAAGATGCCCTCTCGCTCCAGATaGGTGAAGAGCTCGCCACCACTGAGGCACTCAAGG +
Preference number: 6 (lower is better)
Translates to: AVSSRKMPSRSR*VKSSPPLRHSR
Trigger: CCTTGAGTGCCTCAGTGGTGGCGAGCTCTTCACGCATCTGGAGCGAGAGGGCATCTTCCTGGAAGATACGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312629.10
ENST00000525996.7
CDS GCA 72 bp TCCTGTGAGAAACCGAGGGGTAAGAGCCAAGGAAGGTaGCAGGATACCTCCCCGCTCCCGTTCAGGTTGGAC +
Preference number: 6 (lower is better)
Translates to: SCEKPRGKSQGR*QDTSPLPFRLD
Trigger: GTCCAACCTGAACGGGAGCGGGGAGGTATCCTGGCACCTTCCTTGGCTCTTACCCCTCGGTTTCTCACAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524934.5
ENST00000525088.5
CDS GCA 72 bp CTTAATAGAGACCGGGATCTGAGAAGGATCTGGGTCTaGAAAGAGTCGGAGCCCGCTCTGGGCGTGCGGAGC +
Preference number: 6 (lower is better)
Translates to: LNRDRDLRRIWV*KESEPALGVRS
Trigger: GCTCCGCACGCCCAGAGCGGGCTCCGACTCTTTGCAGACCCAGATCCTTCTCAGATCCCGGTCTCTATTAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS GCA 72 bp GGTGAAGCTGGGGACAGGATGAAGAGACCCAGCCACTaGCCTCAGGACGCTCAGTCTACACTGAGGCACTCA +
Preference number: 6 (lower is better)
Translates to: GEAGDRMKRPSH*PQDAQSTLRHS
Trigger: TGAGTGCCTCAGTGTAGACTGAGCGTCCTGAGGGCAGTGGCTGGGTCTCTTCATCCTGTCCCCAGCTTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528964.5
CDS TCA 72 bp CCTCAGCAGTCGGCAGAGGAGACACTAGAAAGCAGGTaGGCGGGAGGCCTCAGCCCAGTTAGAAAAGTGCTC +
Preference number: 6 (lower is better)
Translates to: PQQSAEETLESR*AGGLSPVRKVL
Trigger: GAGCACTTTTCTAACTGGGCTGAGGCCTCCCGCTCACCTGCTTTCTAGTGTCTCCTCTGCCGACTGCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS GCA 72 bp CTCGCCACCTGCCACACAAACACGTCAGCAGCCACGTaGTGGGTCCAAGCCCCTTTGTGCTTTCTGAGTCTT +
Preference number: 6 (lower is better)
Translates to: LATCHTNTSAAT*WVQAPLCFLSL
Trigger: AAGACTCAGAAAGCACAAAGGGGCTTGGACCCAGCACGTGGCTGCTGACGTGTTTGTGTGGCAGGTGGCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525088.5
ENST00000525726.1
CDS GCA 72 bp ACACCTGGGACCAGGTCATTCTTTGTTGTGGGAGGCTaGCCTGCGCATCGTGGGATGTTCAGCAGCATCCCT +
Preference number: 6 (lower is better)
Translates to: TPGTRSFFVVGG*PAHRGMFSSIP
Trigger: AGGGATGCTGCTGAACATCCCACGATGCGCAGGGCAGCCTCCCACAACAAAGAATGACCTGGTCCCAGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS CCA 72 bp TGGAGGAGGACACTACAGAGAATGAACCAGTTGGGCTaGGGACCTGACAGGATGCAGGGCACACGGGAGAGA +
Preference number: 6 (lower is better)
Translates to: WRRTLQRMNQLG*GPDRMQGTRER
Trigger: TCTCTCCCGTGTGCCCTGCATCCTGTCAGGTCCCCAGCCCAACTGGTTCATTCTCTGTAGTGTCCTCCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS TCA 72 bp TATCTTCCAGGAAGATGCCCTCTCGCTCCAGATGCGTaGAGAGCTCGCCACCTGCCACACAAACACGTCAGC +
Preference number: 6 (lower is better)
Translates to: YLPGRCPLAPDA*RARHLPHKHVS
Trigger: GCTGACGTGTTTGTGTGGCAGGTGGCGAGCTCTTCACGCATCTGGAGCGAGAGGGCATCTTCCTGGAAGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525088.5
ENST00000525726.1
CDS TCA 72 bp CACCCACCGGGTGCCAGTAACACTCCCCTCTTGCCTTaGCAATCAAAAATGTGTCCATGCCAGGCGCAGTGG +
Preference number: 6 (lower is better)
Translates to: HPPGASNTPLLP*QSKMCPCQAQW
Trigger: CCACTGCGCCTGGCATGGACACATTTTTGATTGTCAAGGCAAGAGGGGAGTGTTACTGGCACCCGGTGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS GCA 72 bp GTCTCCACCCACCGGGTGCCAGTAACACTCCCCTCTTaGCTTGACAATCAAAAATGTGTCCATGCCAGGCGC +
Preference number: 6 (lower is better)
Translates to: VSTHRVPVTLPS*LDNQKCVHARR
Trigger: GCGCCTGGCATGGACACATTTTTGATTGTCAAGGCAAGAGGGGAGTGTTACTGGCACCCGGTGGGTGGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS CCA 72 bp AGCGCGGTTTGCTGGGACTTTAAGGGGATGCTGAGATaGACGGAGCGAATGCAGAGCATGGAGGCAGAAGCT +
Preference number: 6 (lower is better)
Translates to: SAVCWDFKGMLR*TERMQSMEAEA
Trigger: AGCTTCTGCCTCCATGCTCTGCATTCGCTCCGTCCATCTCAGCATCCCCTTAAAGTCCCAGCAAACCGCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS TCA 72 bp GACACTACAGAGAATGAACCAGTTGGGCTGGGGACCTaGCAGGATGCAGGGCACACGGGAGAGAAGAACAAG +
Preference number: 6 (lower is better)
Translates to: DTTENEPVGLGT*QDAGHTGEKNK
Trigger: CTTGTTCTTCTCTCCCGTGTGCCCTGCATCCTGTCAGGTCCCCAGCCCAACTGGTTCATTCTCTGTAGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS TCA 72 bp GCCACTTACATGTACTCAATGGTGCCGCAGAAGGTGTaGGTGACGGCGCCCTCATGGATAGACTCCTTGCAG +
Preference number: 6 (lower is better)
Translates to: ATYMYSMVPQKV*VTAPSWIDSLQ
Trigger: CTGCAAGGAGTCTATCCATGAGGGCGCCGTCACTCACACCTTCTGCGGCACCATTGAGTACATGTAAGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS GCA 72 bp GCCGTATCTTCCAGGAAGATGCCCTCTCGCTCCAGATaGGTGAAGAGCTCGCCACCTTCCTTAGGACTTTCA +
Preference number: 6 (lower is better)
Translates to: AVSSRKMPSRSR*VKSSPPSLGLS
Trigger: TGAAAGTCCTAAGGAAGGTGGCGAGCTCTTCACGCATCTGGAGCGAGAGGGCATCTTCCTGGAAGATACGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524814.5
CDS CCA 72 bp TCAGAACTTAATAGAGACCGGGATCTGAGAAGGATCTaGGTCTGCAAAGAGTCGGAGCCCGCTCTGGGCGTG +
Preference number: 6 (lower is better)
Translates to: SELNRDRDLRRI*VCKESEPALGV
Trigger: CACGCCCAGAGCGGGCTCCGACTCTTTGCAGACCCAGATCCTTCTCAGATCCCGGTCTCTATTAAGTTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS GCA 72 bp CAACCATCCTCTGGACTTCTATCCAAATTCGCACCATaGCCATCCACCCCCAACACACGTGAGGGACACAGT +
Preference number: 6 (lower is better)
Translates to: QPSSGLLSKFAP*PSTPNTREGHS
Trigger: ACTGTGTCCCTCACGTGTGTTGGGGGTGGATGGGCATGGTGCGAATTTGGATAGAAGTCCAGAGGATGGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS CAA 72 bp AGAATGTTCCGCTCAGCCCGTGTGTGTGCTGTGTCCTaGGCATTGCGCACAATTTTGGCCTGGAGATACAGG +
Preference number: 6 (lower is better)
Translates to: RMFRSARVCAVS*ALRTILAWRYR
Trigger: CCTGTATCTCCAGGCCAAAATTGTGCGCAATGCCAAGGACACAGCACACACACGGGCTGAGCGGAACATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS CCA 72 bp TTCCCTGCTGTCTTCCCAAAGCCTGGTACAGCATGTTaGGAATGGCAGCCACACAGTATTCGTTGGCTGAAC +
Preference number: 6 (lower is better)
Translates to: FPAVFPKPGTAC*EWQPHSIRWLN
Trigger: GTTCAGCCAACGAATACTGTGTGGCTGCCATTCCCAACATGCTGTACCAGGCTTTGGGAAGACAGCAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS CCA 72 bp ACAGGGAGGGGAGTAGGAAGAGACTCAACCATCCTCTaGACTTCTATCCAAATTCGCACCATGCCCATCCAC +
Preference number: 6 (lower is better)
Translates to: TGRGVGRDSTIL*TSIQIRTMPIH
Trigger: GTGGATGGGCATGGTGCGAATTTGGATAGAAGTCCAGAGGATGGTTGAGTCTCTTCCTACTCCCCTCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS CCA 72 bp ATCCCAACAGAACAGAACAGAGAAAGCGCGGTTTGCTaGGACTTTAAGGGGATGCTGAGATGGACGGAGCGA +
Preference number: 6 (lower is better)
Translates to: IPTEQNRESAVC*DFKGMLRWTER
Trigger: TCGCTCCGTCCATCTCAGCATCCCCTTAAAGTCCCAGCAAACCGCGCTTTCTCTGTTCTGTTCTGTTGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS CAA 72 bp AGAATGTTCCGCTCAGCCCGTGTGTGTGCTGTGTCCTaGGCATTGCGCACAATTTTGGCCTTCCTTAGGACT +
Preference number: 6 (lower is better)
Translates to: RMFRSARVCAVS*ALRTILAFLRT
Trigger: AGTCCTAAGGAAGGCCAAAATTGTGCGCAATGCCAAGGACACAGCACACACACGGGCTGAGCGGAACATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312629.10
ENST00000525996.7
ENST00000528964.5
ENST00000530623.5
ENST00000556575.5
CDS CAA 72 bp GTTCCCTGCTGTCTTCCCAAAGCCTGGTACAGCATGTaGGGAATGGCAGCCACACAGTATTCGTTGGCTGAA +
Preference number: 6 (lower is better)
Translates to: VPCCLPKAWYSM*GMAATQYSLAE
Trigger: TTCAGCCAACGAATACTGTGTGGCTGCCATTCCCAACATGCTGTACCAGGCTTTGGGAAGACAGCAGGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS CAA 90 bp ACTGACTCTAGAATGTTCCGCTCAGCCCGTGTGTGTGCTGTGTCCTaGGCATTGCGCACAATTTTGGCCTTCCTTAGGACTTTCATGGCA +
Preference number: 6 (lower is better)
Translates to: TDSRMFRSARVCAVS*ALRTILAFLRTFMA
Trigger: TGCCATGAAAGTCCTAAGGAAGGCCAAAATTGTGCGCAATGCCAAGGACACAGCACACACACGGGCTGAGCGGAACATTCTAGAGTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312629.10
ENST00000525996.7
ENST00000528964.5
ENST00000530623.5
ENST00000556575.5
CDS CAA 90 bp ACTGACTCTAGAATGTTCCGCTCAGCCCGTGTGTGTGCTGTGTCCTaGGCATTGCGCACAATTTTGGCCTGGAGATACAGGAATTGGTTA +
Preference number: 6 (lower is better)
Translates to: TDSRMFRSARVCAVS*ALRTILAWRYRNWL
Trigger: TAACCAATTCCTGTATCTCCAGGCCAAAATTGTGCGCAATGCCAAGGACACAGCACACACACGGGCTGAGCGGAACATTCTAGAGTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS TCA 72 bp CATGTTGGGAATGGCAGCCACACAGTATTCGTTGGCTaGACGAGTGACTCACCTTCCTTAGGACTTTCATGG +
Preference number: 6 (lower is better)
Translates to: HVGNGSHTVFVG*TSDSPSLGLSW
Trigger: CCATGAAAGTCCTAAGGAAGGTGAGTCACTCGTTCAGCCAACGAATACTGTGTGGCTGCCATTCCCAACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS CAA 90 bp TCTAGAATGTTCCGCTCAGCCCGTGTGTGTGCTGTGTCCTTGGCATaGCGCACAATTTTGGCCTGGAGATACAGGAATTGGTTAGAAACT +
Preference number: 6 (lower is better)
Translates to: SRMFRSARVCAVSLA*RTILAWRYRNWLET
Trigger: AGTTTCTAACCAATTCCTGTATCTCCAGGCCAAAATTGTGCGCAATGCCAAGGACACAGCACACACACGGGCTGAGCGGAACATTCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS TCA 72 bp CCAAAAGATCTCGCAGAGAAGACAGGGAAGACAGAGTaGATCCCAACAGAACAGAACAGAGAAAGCGCGGTT +
Preference number: 6 (lower is better)
Translates to: PKDLAEKTGKTE*IPTEQNRESAV
Trigger: AACCGCGCTTTCTCTGTTCTGTTCTGTTGGGATTCACTCTGTCTTCCCTGTCTTCTCTGCGAGATCTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS CCA 72 bp TCCTTAGGACTTTCATGGCATATATTTTGCCCAAGTTaGTGCCTTGCACCTTTCGCACCTGGAACACCTTGC +
Preference number: 6 (lower is better)
Translates to: SLGLSWHIFCPS*CLAPFAPGTPC
Trigger: GCAAGGTGTTCCAGGTGCGAAAGGTGCAAGGCACCAACTTGGGCAAAATATATGCCATGAAAGTCCTAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312629.10
ENST00000420069.3
ENST00000524814.5
ENST00000524934.5
ENST00000525088.5
ENST00000528964.5
ENST00000530623.5
ENST00000556575.5
CDS CAA 72 bp CGTGTGTGTGCTGTGTCCTTGGCATTGCGCACAATTTaGGCCTGGAGATACAGGAATTGGTTAGAAACTGAG +
Preference number: 6 (lower is better)
Translates to: RVCAVSLALRTI*AWRYRNWLETE
Trigger: CTCAGTTTCTAACCAATTCCTGTATCTCCAGGCCAAAATTGTGCGCAATGCCAAGGACACAGCACACACACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS CAA 72 bp TTCCTTAGGACTTTCATGGCATATATTTTGCCCAAGTaGGTGCCTTGCACCTTTCGCACCTGGAACACCTTG +
Preference number: 6 (lower is better)
Translates to: FLRTFMAYILPK*VPCTFRTWNTL
Trigger: CAAGGTGTTCCAGGTGCGAAAGGTGCAAGGCACCAACTTGGGCAAAATATATGCCATGAAAGTCCTAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000312629.10
ENST00000420069.3
ENST00000524814.5
ENST00000524934.5
ENST00000525088.5
ENST00000528964.5
ENST00000530623.5
ENST00000556575.5
CDS CAA 72 bp ATCTGTTTGTTAACTGCTGCATCCTCTGTCACTGCATaGTATTTCTCCATAATTCTGCTGCTGTCAGCCACC +
Preference number: 6 (lower is better)
Translates to: ICLLTAASSVTA*YFSIILLLSAT
Trigger: GGTGGCTGACAGCAGCAGAATTATGGAGAAATACAATGCAGTGACAGAGGATGCAGCAGTTAACAAACAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525088.5
CDS CAA 90 bp AGACCATCCATCTGTTTGTTAACTGCTGCATCCTCTGTCACTGCATaGTATTTCTCCATAATTCTGCTGCTGTCAGCCACCATCATTTTC +
Preference number: 6 (lower is better)
Translates to: RPSICLLTAASSVTA*YFSIILLLSATIIF
Trigger: GAAAATGATGGTGGCTGACAGCAGCAGAATTATGGAGAAATACAATGCAGTGACAGAGGATGCAGCAGTTAACAAACAGATGGATGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525088.5