Pregenerated sensors for RPS6KB1 (Homo sapiens)
Ensembl gene IDs: ENSG00000108443Ensembl transcript IDs: ENST00000225577.9, ENST00000393021.7, ENST00000406116.7, ENST00000443572.6, ENST00000472940.5, ENST00000477179.5, ENST00000489824.1, ENST00000590928.1, ENST00000592726.1
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TTCTCACAATGTTCCATGCCAAGTTCATATGGTCCAACTCCCCCATGGTCCATGGCAGCAGAGCCCCCTTaGTCCCGAAATAAAACTCCT | + |
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Preference number: 2 (lower is better) Translates to: FSQCSMPSSYGPTPPWSMAAEPP*SRNKTP Trigger: AGGAGTTTTATTTCGGGAGCAAGGGGGCTCTGCTGC...CATGGACCATGGGGGAGTTGGACCATATGAACTTGGCATGGAACATTGTGAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000489824.1 |
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| 3UTR-3UTR CAA 90 bp | TTCTCACAATGTTCCATGCCAAGTTCATATGGTCCAACTCCCCCATGGTCCATGCTGACCCCTGGAAGATaGGAAGATGCAGCAGAGCCC | + |
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Preference number: 3 (lower is better) Translates to: FSQCSMPSSYGPTPPWSMLTPGR*EDAAEP Trigger: GGGCTCTGCTGCATCTTCCAATCTTCCAGGGGTCAG...CATGGACCATGGGGGAGTTGGACCATATGAACTTGGCATGGAACATTGTGAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000489824.1 |
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| CDS-3UTR CCA 90 bp | ATAAAACTCCTGGTGGCTGTAACAGCAGCGGCAGTGCTACTCCCGACAGAAGTTTCCTTCGTCGCCTCATaGGCCCGGACCCGCCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: IKLLVAVTAAAVLLPTEVSFVAS*ARTRRS Trigger: GCTGCGGCGGGTCCGGGCCCATGAGGCGACGAAGGA...AACTTCTGTCGGGAGTAGCACTGCCGCTGCTGTTACAGCCACCAGGAGTTTTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489824.1 |
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| CDS-3UTR CCA 90 bp | CCCGAAATAAAACTCCTGGTGGCTGTAACAGCAGCGGCAGTGCTACTCCCGACATCGGAAGTCCGGGGCTaGGTAAAAGCCGTCCCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PEIKLLVAVTAAAVLLPTSEVRG*VKAVPP Trigger: AGGCGGGACGGCTTTTACCCAGCCCCGGACTTCCGA...TGTCGGGAGTAGCACTGCCGCTGCTGTTACAGCCACCAGGAGTTTTATTTCGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000489824.1 |
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| CDS-3UTR CCA 90 bp | ATAAAACTCCTGGTGGCTGTAACAGCAGCGGCAGTGCTACTCCCGACAGAAGTTAGAGCCCGCGTCCTCTaGCTGGTCCAGGTCTATGTC | + |
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Preference number: 4 (lower is better) Translates to: IKLLVAVTAAAVLLPTEVRARVL*LVQVYV Trigger: GACATAGACCTGGACCAGCCAGAGGACGCGGGCTCT...AACTTCTGTCGGGAGTAGCACTGCCGCTGCTGTTACAGCCACCAGGAGTTTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489824.1 |
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| CDS-3UTR GCA 90 bp | ATAAAACTCCTGGTGGCTGTAACAGCAGCGGCAGTGCTACTCCCGACAGAAGTTGCAGCAGAGCCCCCTTaGTCCCGAAATAAAACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: IKLLVAVTAAAVLLPTEVAAEPP*SRNKTP Trigger: AGGAGTTTTATTTCGGGAGCAAGGGGGCTCTGCTGC...AACTTCTGTCGGGAGTAGCACTGCCGCTGCTGTTACAGCCACCAGGAGTTTTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000489824.1 |
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| CDS-3UTR TCA 90 bp | AATGTTCCATGCCAAGTTCATATGGTCCAACTCCCCCATGGTCCATGCTTTCATGTCACTTCTAACAGCTaGGCGCTTCCCCCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NVPCQVHMVQLPHGPCFHVTSNS*ALPPPP Trigger: TGGAGGAGGGGGAAGCGCTCAGCTGTTAGAAGTGAC...ATGAAAGCATGGACCATGGGGGAGTTGGACCATATGAACTTGGCATGGAACATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000489824.1 |
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| CDS-3UTR CCA 90 bp | ATTTCTCACAATGTTCCATGCCAAGTTCATATGGTCCAACTCCCCCATGGTCCACCCGCGTCCTCTGGCTaGTCCAGGTCTATGTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ISHNVPCQVHMVQLPHGPPASSG*SRSMSN Trigger: GTTTGACATAGACCTGGACCAGCCAGAGGACGCGGG...TGGACCATGGGGGAGTTGGACCATATGAACTTGGCATGGAACATTGTGAGAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000489824.1 |
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| CDS-3UTR CCA 90 bp | GTTCATATGGTCCAACTCCCCCATGGTCCATGCTTTCATTTAACTGACCCCTGGGGTCCAACTCCCCCATaGTCCATGCTTTCATTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: VHMVQLPHGPCFHLTDPWGPTPP*SMLSFN Trigger: GTTAAATGAAAGCATGGACCATGGGGGAGTTGGACC...CCAGGGGTCAGTTAAATGAAAGCATGGACCATGGGGGAGTTGGACCATATGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000489824.1 |
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| CDS-3UTR CCA 90 bp | TTCTCACAATGTTCCATGCCAAGTTCATATGGTCCAACTCCCCCATGGTCCATGCATGCCAAGTTCATATaGTCCAACTCCCCCATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FSQCSMPSSYGPTPPWSMHAKFI*SNSPMV Trigger: GACCATGGGGGAGTTGGACCATATGAACTTGGCATG...CATGGACCATGGGGGAGTTGGACCATATGAACTTGGCATGGAACATTGTGAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000489824.1 |
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| CDS-3UTR CCA 90 bp | GTTCATATGGTCCAACTCCCCCATGGTCCATGCTTTCATTTAACTGACCCCTGGCATTTAACTGACCCCTaGAAGATTGGAAGATGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VHMVQLPHGPCFHLTDPWHLTDP*KIGRCS Trigger: GCTGCATCTTCCAATCTTCCAGGGGTCAGTTAAATG...CCAGGGGTCAGTTAAATGAAAGCATGGACCATGGGGGAGTTGGACCATATGAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000489824.1 |
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| CDS-3UTR GCA 90 bp | ATTTCTCACAATGTTCCATGCCAAGTTCATATGGTCCAACTCCCCCATGGTCCATATGTCAAACACTCCTaGCATGTCCTCAGCTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ISHNVPCQVHMVQLPHGPYVKHS*HVLSFP Trigger: AGGGAAGCTGAGGACATGGCAGGAGTGTTTGACATA...TGGACCATGGGGGAGTTGGACCATATGAACTTGGCATGGAACATTGTGAGAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000489824.1 |
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| CDS-3UTR TCA 90 bp | AATGTTCCATGCCAAGTTCATATGGTCCAACTCCCCCATGGTCCATGCTTTCATATGCTTTCATTTAACTaGCCCCTGGAAGATTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: NVPCQVHMVQLPHGPCFHMLSFN*PLEDWK Trigger: CTTCCAATCTTCCAGGGGTCAGTTAAATGAAAGCAT...ATGAAAGCATGGACCATGGGGGAGTTGGACCATATGAACTTGGCATGGAACATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000489824.1 |
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| CDS CCA 90 bp | CACTCCTGCCATGTCCTCAGCTTCCCTGTCTCGGAAGTCCGGGGCTaGGTAAAAGCCGTCCCGCCTCCTTCGTCGCCTCATGGGCCCGGA | + |
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Preference number: 5 (lower is better) Translates to: HSCHVLSFPVSEVRG*VKAVPPPSSPHGPG Trigger: TCCGGGCCCATGAGGCGACGAAGGAGGCGGGACGGCTTTTACCCAGCCCCGGACTTCCGAGACAGGGAAGCTGAGGACATGGCAGGAGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000225577.9 ENST00000393021.7 ENST00000406116.7 ENST00000443572.6 ENST00000472940.5 ENST00000477179.5 ENST00000489824.1 |
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| CDS TCA 90 bp | GCTGAGGCAGGAGAATGGCGTGAACCCGTGAGGCGGAGCTTGCAGTaGGCCAAGATCGCGCCACTGCAGCAGTCCAGCCTGGGCAACAGA | + |
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Preference number: 5 (lower is better) Translates to: AEAGEWREPVRRSLQ*AKIAPLQQSSLGNR Trigger: TCTGTTGCCCAGGCTGGACTGCTGCAGTGGCGCGATCTTGGCTCACTGCAAGCTCCGCCTCACGGGTTCACGCCATTCTCCTGCCTCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592726.1 |
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| CDS GCA 90 bp | AGAGCCCGCGTCCTCTGGCTGGTCCAGGTCTATGTCAAACACTCCTaGCATGTCCTCAGCTTCCCTGTCTCGGAAGTCCGGGGCTGGGTA | + |
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Preference number: 5 (lower is better) Translates to: RARVLWLVQVYVKHS*HVLSFPVSEVRGWV Trigger: TACCCAGCCCCGGACTTCCGAGACAGGGAAGCTGAGGACATGGCAGGAGTGTTTGACATAGACCTGGACCAGCCAGAGGACGCGGGCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000225577.9 ENST00000393021.7 ENST00000406116.7 ENST00000443572.6 ENST00000472940.5 ENST00000477179.5 ENST00000489824.1 |
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| CDS-3UTR CAA 90 bp | AATGTTCCATGCCAAGTTCATATGGTCCAACTCCCCCATGGTCCATGCTTTCATCTGACCCCTGGAAGATaGGAAGATGCAGCAGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: NVPCQVHMVQLPHGPCFHLTPGR*EDAAEP Trigger: GGGCTCTGCTGCATCTTCCAATCTTCCAGGGGTCAG...ATGAAAGCATGGACCATGGGGGAGTTGGACCATATGAACTTGGCATGGAACATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000489824.1 |
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| CDS TCA 90 bp | AGTTCATATGGTCCAACTCCCCCATGGTCCATGCTTTCATTTAACTaGCCCAAATTGGTCACGGATTCAACTGAATCCTATCAAAACCCC | + |
|
Preference number: 5 (lower is better) Translates to: SSYGPTPPWSMLSFN*PKLVTDSTESYQNP Trigger: GGGGTTTTGATAGGATTCAGTTGAATCCGTGACCAATTTGGGTCAGTTAAATGAAAGCATGGACCATGGGGGAGTTGGACCATATGAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000592726.1 |
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| CDS TCA 90 bp | TCAACTGAATCCTATCAAAACCCCAGGTTCCTTTCTTGCAGAAATTaGCAAGCTGATCCTAAATTTCATATAGAAATGCAAGGGACCACC | + |
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Preference number: 5 (lower is better) Translates to: STESYQNPRFLSCRN*QADPKFHIEMQGTT Trigger: GGTGGTCCCTTGCATTTCTATATGAAATTTAGGATCAGCTTGTCAATTTCTGCAAGAAAGGAACCTGGGGTTTTGATAGGATTCAGTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592726.1 |
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| CDS CCA 72 bp | CATGTCCTCAGCTTCCCTGTCTCGGAAGTCCGGGGCTaGGTAAAAGCCGTCCCGCCTCCTTCGTCGCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: HVLSFPVSEVRG*VKAVPPPSSPH Trigger: ATGAGGCGACGAAGGAGGCGGGACGGCTTTTACCCAGCCCCGGACTTCCGAGACAGGGAAGCTGAGGACATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000225577.9 ENST00000393021.7 ENST00000406116.7 ENST00000443572.6 ENST00000472940.5 ENST00000477179.5 ENST00000489824.1 |
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| CDS TCA 72 bp | GGTCCAACTCCCCCATGGTCCATGCTTTCATTTAACTaGCCCAAATTGGTCACGGATTCAACTGAATCCTAT | + |
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Preference number: 6 (lower is better) Translates to: GPTPPWSMLSFN*PKLVTDSTESY Trigger: ATAGGATTCAGTTGAATCCGTGACCAATTTGGGTCAGTTAAATGAAAGCATGGACCATGGGGGAGTTGGACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000592726.1 |
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| CDS GCA 72 bp | AAGGGCATTATCTATTCAACATCTATTTCACAGGCCTaGCATGACATAGATCATTTAAAAGAAAATGTTTCG | + |
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Preference number: 6 (lower is better) Translates to: KGIIYSTSISQA*HDIDHLKENVS Trigger: CGAAACATTTTCTTTTAAATGATCTATGTCATGGCAGGCCTGTGAAATAGATGTTGAATAGATAATGCCCTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000590928.1 |
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