RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RPS6KA6 (Homo sapiens)

Ensembl gene IDs: ENSG00000072133

Ensembl transcript IDs: ENST00000262752.5, ENST00000460730.1, ENST00000620340.4

Found 278 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGCAGTAGTAGCTaGTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAA +
Preference number: 1 (lower is better)
Translates to: SSSSSSSSSSSSSSS*CCCCSNGIFFNNVK
Trigger: TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACTGCTACTACTACTACTACTACTACTACTACTACTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR CCA 90 bp CATCCAGTAGCATACCTGTATCTTTTATACACTGTCAGTCCTCACTaGGTGATCAGAAATCATGCTGTTCATTGCTTAATTCTTATAGTG +
Preference number: 1 (lower is better)
Translates to: HPVAYLYLLYTVSPH*VIRNHAVHCLILIV
Trigger: CACTATAAGAATTAAGCAATGAACAGCATGATTTCTGATCACCCAGTGAGGACTGACAGTGTATAAAAGATACAGGTATGCTACTGGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR TCA 90 bp CTACAGCAAGATGTCAACTGTATTATCATAGGATTCAAGGTAGAATaGTATGCTACACTGTACTTCAAAGCACATCGAAGTCAGAAAAAC +
Preference number: 1 (lower is better)
Translates to: LQQDVNCIIIGFKVE*YATLYFKAHRSQKN
Trigger: GTTTTTCTGACTTCGATGTGCTTTGAAGTACAGTGTAGCATATCATTCTACCTTGAATCCTATGATAATACAGTTGACATCTTGCTGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR GCA 90 bp GCAAGATGTCAACTGTATTATCATAGGATTCAAGGTAGAATGATATaGTACACTGTACTTCAAAGCACATCGAAGTCAGAAAAACAACAG +
Preference number: 1 (lower is better)
Translates to: ARCQLYYHRIQGRMI*YTVLQSTSKSEKQQ
Trigger: CTGTTGTTTTTCTGACTTCGATGTGCTTTGAAGTACAGTGTAGCATATCATTCTACCTTGAATCCTATGATAATACAGTTGACATCTTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR GCA 90 bp GTATCTTTTATACACTGTCAGTCCTCACTGGGTGATCAGAAATCATaGTGTTCATTGCTTAATTCTTATAGTGTTCCTTTTATGATAGGA +
Preference number: 1 (lower is better)
Translates to: VSFIHCQSSLGDQKS*CSLLNSYSVPFMIG
Trigger: TCCTATCATAAAAGGAACACTATAAGAATTAAGCAATGAACAGCATGATTTCTGATCACCCAGTGAGGACTGACAGTGTATAAAAGATAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR TCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTTGTGCAGAGAAGTTGTaGGGACCTGGTGGACACCAA +
Preference number: 2 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGCAEKL*GPGGHQ
Trigger: TTGGTGTCCACCAGGTCCTCACAACTTCTCTGCACA...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR TCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATTGTGCAGAGAAGTTGTaGGGACCTGGTGGACACCAA +
Preference number: 2 (lower is better)
Translates to: CSNKIDSMKGLESQEKENCAEKL*GPGGHQ
Trigger: TTGGTGTCCACCAGGTCCTCACAACTTCTCTGCACA...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR TCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTTCAGTCCTCACTGGGTaGTCAGAAATCATGCTGTTC +
Preference number: 2 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGSVLTG*SEIMLF
Trigger: GAACAGCATGATTTCTGATCACCCAGTGAGGACTGA...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR GCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATAGCAGTAGTAGCTGCTaGTGTTGTTGTAGCAACGGT +
Preference number: 2 (lower is better)
Translates to: CSNKIDSMKGLESQEKENSSSSC*CCCSNG
Trigger: ACCGTTGCTACAACAACAGCAGCAGCTACTACTGCT...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR GCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTAGTAGCAGTAGTAGCTaGTGCTGTTGTTGTAGCAAC +
Preference number: 2 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGSSSSS*CCCCSN
Trigger: GTTGCTACAACAACAGCAGCAGCTACTACTGCTACT...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR CCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTACTGTCAGTCCTCACTaGGTGATCAGAAATCATGCT +
Preference number: 2 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGTVSPH*VIRNHA
Trigger: AGCATGATTTCTGATCACCCAGTGAGGACTGACAGT...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR CCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTCATCTTCATCCAGTTTaGCCTAGGAACACCACAAAT +
Preference number: 2 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGHLHPV*PRNTTN
Trigger: ATTTGTGGTGTTCCTAGGCCAAACTGGATGAAGATG...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR CCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTGTTGTGAGGACCTGGTaGACACCAATTATATGCTTA +
Preference number: 2 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGVVRTW*TPIICL
Trigger: TAAGCATATAATTGGTGTCCACCAGGTCCTCACAAC...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR CCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATGAAGTTGTGAGGACCTaGTGGACACCAATTATATGC +
Preference number: 2 (lower is better)
Translates to: CSNKIDSMKGLESQEKENEVVRT*WTPIIC
Trigger: GCATATAATTGGTGTCCACCAGGTCCTCACAACTTC...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR CCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATACTGTCAGTCCTCACTaGGTGATCAGAAATCATGCT +
Preference number: 2 (lower is better)
Translates to: CSNKIDSMKGLESQEKENTVSPH*VIRNHA
Trigger: AGCATGATTTCTGATCACCCAGTGAGGACTGACAGT...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR CCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTCTGCATTTTTGGCTATaGAGTTCTAGCCAAACTGGA +
Preference number: 2 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGLHFWL*SSSQTG
Trigger: TCCAGTTTGGCTAGAACTCCATAGCCAAAAATGCAG...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR CCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATGTTGTGAGGACCTGGTaGACACCAATTATATGCTTA +
Preference number: 2 (lower is better)
Translates to: CSNKIDSMKGLESQEKENVVRTW*TPIICL
Trigger: TAAGCATATAATTGGTGTCCACCAGGTCCTCACAAC...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR CCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTTATGATAGGACTGTATaGCATGACCTTTCTGAGCAA +
Preference number: 2 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGYDRTV*HDLSEQ
Trigger: TTGCTCAGAAAGGTCATGCCATACAGTCCTATCATA...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR CCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATCTGCATTTTTGGCTATaGAGTTCTAGCCAAACTGGA +
Preference number: 2 (lower is better)
Translates to: CSNKIDSMKGLESQEKENLHFWL*SSSQTG
Trigger: TCCAGTTTGGCTAGAACTCCATAGCCAAAAATGCAG...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR GCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATAGCACAAATGTATTTTaGTCTGGCACCAAACCACTA +
Preference number: 2 (lower is better)
Translates to: CSNKIDSMKGLESQEKENSTNVF*SGTKPL
Trigger: TAGTGGTTTGGTGCCAGAGCAAAATACATTTGTGCT...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR GCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTCAAGGTAGAATGATATaGTACACTGTACTTCAAAGC +
Preference number: 2 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGQGRMI*YTVLQS
Trigger: GCTTTGAAGTACAGTGTAGCATATCATTCTACCTTG...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR CCA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAACATCTTCATCCAGTTTaGCCTAGGAACACCACAAAT +
Preference number: 2 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKHLHPV*PRNTTN
Trigger: ATTTGTGGTGTTCCTAGGCCAAACTGGATGAAGATG...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR CCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTATGAATGGAGTCCTTTaGTTTTACGGAATAACAAGC +
Preference number: 2 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGMNGVL*FYGITS
Trigger: GCTTGTTATTCCGTAAAACCAAAGGACTCCATTCAT...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR CCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATCCAAATCTGCATTTTTaGCTATGGAGTTCTAGCCAA +
Preference number: 2 (lower is better)
Translates to: CSNKIDSMKGLESQEKENPNLHF*LWSSSQ
Trigger: TTGGCTAGAACTCCATAGCCAAAAATGCAGATTTGG...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR CCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATACTAGTCAATCTGTATaGAAGTTTCTCTGGGCAGTA +
Preference number: 2 (lower is better)
Translates to: CSNKIDSMKGLESQEKENTSQSV*KFLWAV
Trigger: TACTGCCCAGAGAAACTTCCATACAGATTGACTAGT...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR GCA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAAAGCACAAATGTATTTTaGTCTGGCACCAAACCACTA +
Preference number: 2 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKSTNVF*SGTKPL
Trigger: TAGTGGTTTGGTGCCAGAGCAAAATACATTTGTGCT...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR GCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCAAGTAGCAGTAGTAGCTaGTGCTGTTGTTGTAGCAAC +
Preference number: 2 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSSSSSS*CCCCSN
Trigger: GTTGCTACAACAACAGCAGCAGCTACTACTGCTACT...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR GCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTGGTGATCAGAAATCATaGTGTTCATTGCTTAATTCT +
Preference number: 2 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGGDQKS*CSLLNS
Trigger: AGAATTAAGCAATGAACAGCATGATTTCTGATCACC...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR GCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTTGTTCAATCCAAATCTaGATTTTTGGCTATGGAGTT +
Preference number: 2 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGCSIQI*IFGYGV
Trigger: AACTCCATAGCCAAAAATGCAGATTTGGATTGAACA...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR CCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATATGAATGGAGTCCTTTaGTTTTACGGAATAACAAGC +
Preference number: 2 (lower is better)
Translates to: CSNKIDSMKGLESQEKENMNGVL*FYGITS
Trigger: GCTTGTTATTCCGTAAAACCAAAGGACTCCATTCAT...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR CCA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAAAGTGAGTCAAATGAATaGAGTCCTTTGGTTTTACGG +
Preference number: 2 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKSESNE*SPLVLR
Trigger: CCGTAAAACCAAAGGACTCCATTCATTTGACTCACT...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR TCA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAATGCAAACACATAGTATaGATATTGTGGACCTGTGAA +
Preference number: 2 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKCKHIV*ILWTCE
Trigger: TTCACAGGTCCACAATATTCATACTATGTGTTTGCA...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR TCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCAATAGAATGGATATCCTaGTTTGGGGAAGAGGAAGAG +
Preference number: 2 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSIEWIS*FGEEEE
Trigger: CTCTTCCTCTTCCCCAAATCAGGATATCCATTCTAT...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR GCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATATATACAGATCTGCCTaGACACATTATCTGAGATAT +
Preference number: 2 (lower is better)
Translates to: CSNKIDSMKGLESQEKENIYRSA*THYLRY
Trigger: ATATCTCAGATAATGTGTGCAGGCAGATCTGTATAT...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR GCA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAAGATAATATACAGATCTaGCTGCACACATTATCTGAG +
Preference number: 2 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKDNIQI*LHTLSE
Trigger: CTCAGATAATGTGTGCAGGCAGATCTGTATATTATC...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR GCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATATACTATATCATGTGTaGTATATGCACAAGTCCACT +
Preference number: 2 (lower is better)
Translates to: CSNKIDSMKGLESQEKENILYHV*YMHKST
Trigger: AGTGGACTTGTGCATATAGCACACATGATATAGTAT...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR GCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCACCCCATCACCAGCACTaGATTCGAATTTTCTTGAAA +
Preference number: 2 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSPHHQH*IRIFLK
Trigger: TTTCAAGAAAATTCGAATGCAGTGCTGGTGATGGGG...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR GCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCACTTAAGGTTGTGGGTTaGCTAAACATATGGAATCCC +
Preference number: 2 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSLKVVG*LNIWNP
Trigger: GGGATTCCATATGTTTAGGCAACCCACAACCTTAAG...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR CCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCAGGTTGCCTAAACATATaGAATCCCTTTGAGCCAAAC +
Preference number: 2 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSGCLNI*NPFEPN
Trigger: GTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACC...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR TCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCAGGATTCAAGGTAGAATaGTATGCTACACTGTACTTC +
Preference number: 2 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSGFKVE*YATLYF
Trigger: GAAGTACAGTGTAGCATATCATTCTACCTTGAATCC...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR TCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCAGCTCCTTCTACAAAATaGCAGTATGTTTTGAAGCTC +
Preference number: 2 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSAPSTK*QYVLKL
Trigger: GAGCTTCAAAACATACTGTCATTTTGTAGAAGGAGC...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR CCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCAACTAGTCAATCTGTATaGAAGTTTCTCTGGGCAGTA +
Preference number: 2 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSTSQSV*KFLWAV
Trigger: TACTGCCCAGAGAAACTTCCATACAGATTGACTAGT...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR CAA 90 bp GTCAATCTGTATGGAAGTTTCTCTGGGCAGTACTATTTTAACATGTaGTTCCAATGGGCAGACATTATAAATACCAAGCATCTGTTCTTA +
Preference number: 2 (lower is better)
Translates to: VNLYGSFSGQYYFNM*FQWADIINTKHLFL
Trigger: TAAGAACAGATGCTTGGTATTTATAATGTCTGCCCATTGGAACAACATGTTAAAATAGTACTGCCCAGAGAAACTTCCATACAGATTGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR TCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCATGCAAACACATAGTATaGATATTGTGGACCTGTGAA +
Preference number: 2 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSCKHIV*ILWTCE
Trigger: TTCACAGGTCCACAATATTCATACTATGTGTTTGCA...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR GCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCACAAGGTAGAATGATATaGTACACTGTACTTCAAAGC +
Preference number: 2 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSQGRMI*YTVLQS
Trigger: GCTTTGAAGTACAGTGTAGCATATCATTCTACCTTG...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR GCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCAATTCATGGTAGTATGTaGTTAAGGACAACAGGTTGT +
Preference number: 2 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSIHGSM*LRTTGC
Trigger: ACAACCTGTTGTCCTTAAGCACATACTACCATGAAT...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR GCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCAATATACAGATCTGCCTaGACACATTATCTGAGATAT +
Preference number: 2 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSIYRSA*THYLRY
Trigger: ATATCTCAGATAATGTGTGCAGGCAGATCTGTATAT...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR GCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCAATACTATATCATGTGTaGTATATGCACAAGTCCACT +
Preference number: 2 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSILYHV*YMHKST
Trigger: AGTGGACTTGTGCATATAGCACACATGATATAGTAT...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR GCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCAGGTGATCAGAAATCATaGTGTTCATTGCTTAATTCT +
Preference number: 2 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSGDQKS*CSLLNS
Trigger: AGAATTAAGCAATGAACAGCATGATTTCTGATCACC...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR CAA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATACATATGGAATCCCTTaGAGCCAAACAGAGGTGCTA +
Preference number: 3 (lower is better)
Translates to: CSNKIDSMKGLESQEKENTYGIP*SQTEVL
Trigger: TAGCACCTCTGTTTGGCTCAAAGGGATTCCATATGT...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR CCA 72 bp GCATCTGTTCTTAAGGTTGTGGGTTGCCTAAACATATaGAATCCCTTTGAGCCAAACAGAGGTGCTATCAAA +
Preference number: 3 (lower is better)
Translates to: ASVLKVVGCLNI*NPFEPNRGAIK
Trigger: TTTGATAGCACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAGAACAGATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR CAA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTCCAGGAAACAGATATTaGTGCATGGGGTATAGATTA +
Preference number: 3 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGPGNRY*CMGYRL
Trigger: TAATCTATACCCCATGCACAAATATCTGTTTCCTGG...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR TCA 72 bp GGATTAGGCATCCTTACCTGGGCTCCTTCTACAAAATaGCAGTATGTTTTGAAGCTCTCCCATATAATAAGG +
Preference number: 3 (lower is better)
Translates to: GLGILTWAPSTK*QYVLKLSHIIR
Trigger: CCTTATTATATGGGAGAGCTTCAAAACATACTGTCATTTTGTAGAAGGAGCCCAGGTAAGGATGCCTAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR CAA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTAATGAATGGAGTCCTTaGGTTTTACGGAATAACAAG +
Preference number: 3 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGNEWSP*VLRNNK
Trigger: CTTGTTATTCCGTAAAACCAAAGGACTCCATTCATT...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR CAA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATAATGAATGGAGTCCTTaGGTTTTACGGAATAACAAG +
Preference number: 3 (lower is better)
Translates to: CSNKIDSMKGLESQEKENNEWSP*VLRNNK
Trigger: CTTGTTATTCCGTAAAACCAAAGGACTCCATTCATT...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR CAA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCATCCCATATAATAAGGTaGCCCCCTACTACTGTGGTT +
Preference number: 3 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSSHIIR*PPTTVV
Trigger: AACCACAGTAGTAGGGGGCAACCTTATTATATGGGA...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR CAA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATAGGTTGTTAGTCTATTaGAGCAAACCTGATGTTTTC +
Preference number: 3 (lower is better)
Translates to: CSNKIDSMKGLESQEKENRLLVY*SKPDVF
Trigger: GAAAACATCAGGTTTGCTCAAATAGACTAACAACCT...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR CAA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATCTTAAGGACAACAGGTaGTTAGTCTATTTGAGCAAA +
Preference number: 3 (lower is better)
Translates to: CSNKIDSMKGLESQEKENLKDNR*LVYLSK
Trigger: TTTGCTCAAATAGACTAACAACCTGTTGTCCTTAAG...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR GCA 72 bp AGTAGTAGTAGTAGTAGTAGTAGCAGTAGTAGCTGCTaGTGTTGTTGTAGCAACGGTATTTTCTTCAACAAC +
Preference number: 3 (lower is better)
Translates to: SSSSSSSSSSSC*CCCSNGIFFNN
Trigger: GTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACTGCTACTACTACTACTACTACTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR GCA 72 bp AGTAGTAGTAGTAGTAGTAGTAGTAGCAGTAGTAGCTaGTGCTGTTGTTGTAGCAACGGTATTTTCTTCAAC +
Preference number: 3 (lower is better)
Translates to: SSSSSSSSSSSS*CCCCSNGIFFN
Trigger: GTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACTGCTACTACTACTACTACTACTACTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR CAA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCATATCACCTTGTTAGATaGCCTGAAGATCCAGCAACT +
Preference number: 3 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSYHLVR*PEDPAT
Trigger: AGTTGCTGGATCTTCAGGCAATCTAACAAGGTGATA...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR CAA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCATACCACAAATATGCTTaGCCCACTTTAAAGCCTAAG +
Preference number: 3 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSYHKYA*PTLKPK
Trigger: CTTAGGCTTTAAAGTGGGCAAAGCATATTTGTGGTA...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR GCA 72 bp ATACACTGTCAGTCCTCACTGGGTGATCAGAAATCATaGTGTTCATTGCTTAATTCTTATAGTGTTCCTTTT +
Preference number: 3 (lower is better)
Translates to: IHCQSSLGDQKS*CSLLNSYSVPF
Trigger: AAAAGGAACACTATAAGAATTAAGCAATGAACAGCATGATTTCTGATCACCCAGTGAGGACTGACAGTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR CAA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCACTTAAGGACAACAGGTaGTTAGTCTATTTGAGCAAA +
Preference number: 3 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSLKDNR*LVYLSK
Trigger: TTTGCTCAAATAGACTAACAACCTGTTGTCCTTAAG...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR-3UTR CAA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCACCAGCAACTAAAAACTaGATTAATGCACAACTTCCT +
Preference number: 3 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSPATKN*INAQLP
Trigger: AGGAAGTTGTGCATTAATCAAGTTTTTAGTTGCTGG...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTGGGTCTCTCAGAGGCTaGGAGCTGGGGGTCGCCGCC +
Preference number: 4 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGGSLRG*ELGVAA
Trigger: GGCGGCGACCCCCAGCTCCCAGCCTCTGAGAGACCC...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262752.5
CDS-3UTR GCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATGCCTTCAGCGAGCGCTaGCCTCGCCGCCGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: CSNKIDSMKGLESQEKENAFSER*PRRRVS
Trigger: AGAGACCCGGCGGCGAGGGCAGCGCTCGCTGAAGGC...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262752.5
CDS-3UTR GCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATTGCCTCTCCAAGAGCTaGCGCTCGGCTCGCGCTCAC +
Preference number: 4 (lower is better)
Translates to: CSNKIDSMKGLESQEKENCLSKS*RSARAH
Trigger: GTGAGCGCGAGCCGAGCGGCAGCTCTTGGAGAGGCA...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262752.5
CDS-3UTR CCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCAGCTGCCGCCTACCGCTaGCGCGGCCGCGCATCCTGT +
Preference number: 4 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSAAAYR*RGRASC
Trigger: ACAGGATGCGCGGCCGCGCCAGCGGTAGGCGGCAGC...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262752.5
CDS-3UTR TCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATTCGCGCCGCCGCCGCTaGACACTTCCATTTCTCGGT +
Preference number: 4 (lower is better)
Translates to: CSNKIDSMKGLESQEKENSRRRR*TLPFLG
Trigger: ACCGAGAAATGGAAGTGTTCAGCGGCGGCGGCGCGA...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262752.5
CDS-3UTR GCA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAAGCTCGCGCTCACCACTaGCACCACAACGACAGCCGC +
Preference number: 4 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKARAHH*HHNDSR
Trigger: GCGGCTGTCGTTGTGGTGGCAGTGGTGAGCGCGAGC...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262752.5
CDS-3UTR GCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTAGGCATGAGCCACTGTaGCCGGCCGGCTGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGRHEPL*PAGCFL
Trigger: CAAGAAACAGCCGGCCGGGCACAGTGGCTCATGCCT...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCAGCGCATCCTGTCTATTaGACTGGCCCGCCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSAHPVY*TGPPPP
Trigger: CGGCGGCGGCGGGCCAGTTCAATAGACAGGATGCGC...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262752.5
CDS-3UTR TCA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAATCCCAGGGCTCGTCCTaGGGAGCGAATGGTAGCATC +
Preference number: 4 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKSQGSS*GANGSI
Trigger: GATGCTACCATTCGCTCCTCAGGACGAGCCCTGGGA...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262752.5
CDS-3UTR TCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTTTGCCCAGGCTGGAGTaGAATTGGCACAATCTCGGC +
Preference number: 4 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGLPRLE*NWHNLG
Trigger: GCCGAGATTGTGCCAATTTCACTCCAGCCTGGGCAA...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCACACTCAAACAGGAGCTaGCGCCTACCGCTGGCGCGG +
Preference number: 4 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSHSNRS*RLPLAR
Trigger: CCGCGCCAGCGGTAGGCGGCAGCTCCTGTTTGAGTG...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262752.5
CDS-3UTR GCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTGAGCTGATGAGCATTTaGACTGGCTGGCAAACCGGG +
Preference number: 4 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGELMSI*TGWQTG
Trigger: CCCGGTTTGCCAGCCAGTGCAAATGCTCATCAGCTC...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTGCTCACCGCAACCTCTaGCTCCCAGGTTCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGAHRNL*LPGSSD
Trigger: ATCACTTGAACCTGGGAGGCAGAGGTTGCGGTGAGC...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATAAGACAACTCTGTGCTaGCTCTCCAAGAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: CSNKIDSMKGLESQEKENKTTLC*LSKSCR
Trigger: GCGGCAGCTCTTGGAGAGGCAGCACAGAGTTGTCTT...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262752.5
CDS-3UTR TCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTCCTGACCAAGAACCTTaGGCAACTCAAACTGTGCAG +
Preference number: 4 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGPDQEP*ATQTVQ
Trigger: CTGCACAGTTTGAGTTGCTCAAGGTTCTTGGTCAGG...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATGAGAAGACAACTCTGTaGTGCCTCTCCAAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: CSNKIDSMKGLESQEKENEKTTL*CLSKSC
Trigger: GCAGCTCTTGGAGAGGCAGCACAGAGTTGTCTTCTC...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262752.5
CDS-3UTR GCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTATGTTCGCTTTTTCATaGTCCGTCGCTGGGCTAAGC +
Preference number: 4 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGMFAFS*SVAGLS
Trigger: GCTTAGCCCAGCGACGGAGCATGAAAAAGCGAACAT...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCAAGGCATGAGCCACTGTaGCCGGCCGGCTGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSRHEPL*PAGCFL
Trigger: CAAGAAACAGCCGGCCGGGCACAGTGGCTCATGCCT...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATTTCATGCTCCGTCGCTaGGCTAAGCTTGAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: CSNKIDSMKGLESQEKENFMLRR*AKLEAA
Trigger: AGCTGCTTCAAGCTTAGCCCAGCGACGGAGCATGAA...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATCCTAATTGGTGCAGATaGTCCAAAGCAAGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: CSNKIDSMKGLESQEKENPNWCR*SKARAS
Trigger: ACTGGCCCTTGCTTTGGATCATCTGCACCAATTAGG...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAATGTGCAGAGAAGTTGTaGGGACCTGGTGGACACCAA +
Preference number: 4 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKCAEKL*GPGGHQ
Trigger: TTGGTGTCCACCAGGTCCTCACAACTTCTCTGCACA...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTCAGGGCAGAGTATGTTaGAACCATTGCTCCCTTAAC +
Preference number: 4 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGQGRVC*NHCSLN
Trigger: GTTAAGGGAGCAATGGTTGCAACATACTCTGCCCTG...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTAGCATTTGCACTGGCTaGCAAACCGGGAGAATCTTT +
Preference number: 4 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGSICTG*QTGRIF
Trigger: AAAGATTCTCCCGGTTTGCCAGCCAGTGCAAATGCT...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATGATGAGCATTTGCACTaGCTGGCAAACCGGGAGAAT +
Preference number: 4 (lower is better)
Translates to: CSNKIDSMKGLESQEKENDEHLH*LANREN
Trigger: ATTCTCCCGGTTTGCCAGCCAGTGCAAATGCTCATC...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CCA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAATTCATGCTCCGTCGCTaGGCTAAGCTTGAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKFMLRR*AKLEAA
Trigger: AGCTGCTTCAAGCTTAGCCCAGCGACGGAGCATGAA...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTACAACTCCTTCATCATaGCAAGAATCTGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGTTPSS*QESASP
Trigger: GGGAGAAGCAGATTCTTGTCATGATGAAGGAGTTGT...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAACCTGACCAAGAACCTTaGGCAACTCAAACTGTGCAG +
Preference number: 4 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKPDQEP*ATQTVQ
Trigger: CTGCACAGTTTGAGTTGCTCAAGGTTCTTGGTCAGG...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAACCTAATTGGTGCAGATaGTCCAAAGCAAGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKPNWCR*SKARAS
Trigger: ACTGGCCCTTGCTTTGGATCATCTGCACCAATTAGG...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTCATAAGAACACCATATaGCCACCAATCAGCACTCTG +
Preference number: 4 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGHKNTI*PPISTL
Trigger: CAGAGTGCTGATTGGTGGTCATATGGTGTTCTTATG...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTTTCCAGAAGCAGGTTTaGAAGGAGGTTGAACTTCTC +
Preference number: 4 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGFQKQV*KEVELL
Trigger: GAGAAGTTCAACCTCCTTTCAAACCTGCTTCTGGAA...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATGGCAACTGGTCTCTGTaGGTTATCCATGAGTGCTTT +
Preference number: 4 (lower is better)
Translates to: CSNKIDSMKGLESQEKENGNWSL*VIHECF
Trigger: AAAGCACTCATGGATAACTCACAGAGACCAGTTGCC...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCATTGCCCAGGCTGGAGTaGAATTGGCACAATCTCGGC +
Preference number: 4 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSLPRLE*NWHNLG
Trigger: GCCGAGATTGTGCCAATTTCACTCCAGCCTGGGCAA...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATAGCAAGGGCCAGTTCTaGGAGGTAGAATTTCACATC +
Preference number: 4 (lower is better)
Translates to: CSNKIDSMKGLESQEKENSKGQF*EVEFHI
Trigger: GATGTGAAATTCTACCTCGCAGAACTGGCCCTTGCT...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCAGAGCTGATGAGCATTTaGACTGGCTGGCAAACCGGG +
Preference number: 4 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSELMSI*TGWQTG
Trigger: CCCGGTTTGCCAGCCAGTGCAAATGCTCATCAGCTC...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATCAGGGCAGAGTATGTTaGAACCATTGCTCCCTTAAC +
Preference number: 4 (lower is better)
Translates to: CSNKIDSMKGLESQEKENQGRVC*NHCSLN
Trigger: GTTAAGGGAGCAATGGTTGCAACATACTCTGCCCTG...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAAATGTTCGCTTTTTCATaGTCCGTCGCTGGGCTAAGC +
Preference number: 4 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKMFAFS*SVAGLS
Trigger: GCTTAGCCCAGCGACGGAGCATGAAAAAGCGAACAT...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CCA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAAGATGAGCATTTGCACTaGCTGGCAAACCGGGAGAAT +
Preference number: 4 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKDEHLH*LANREN
Trigger: ATTCTCCCGGTTTGCCAGCCAGTGCAAATGCTCATC...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATACAACTCCTTCATCATaGCAAGAATCTGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: CSNKIDSMKGLESQEKENTTPSS*QESASP
Trigger: GGGAGAAGCAGATTCTTGTCATGATGAAGGAGTTGT...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTAAAAACCTTTCCAAATaGCCCCTGACCAAGAACCTT +
Preference number: 4 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGKNLSK*PLTKNL
Trigger: AAGGTTCTTGGTCAGGGGTCATTTGGAAAGGTTTTT...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTCTTTTCTTGATCTACTaGCTCCTTGCTGAGTCCAAA +
Preference number: 4 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGLFLIY*LLAESK
Trigger: TTTGGACTCAGCAAGGAGTCAGTAGATCAAGAAAAG...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTTTCTTCAACTCCTTCTaGTCCCAATCTATTTGCTGG +
Preference number: 4 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGFFNSF*SQSICW
Trigger: CCAGCAAATAGATTGGGATCAGAAGGAGTTGAAGAA...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTCAAAATCACATATCCTaGTTGAATCTGCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGQNHIS*LNLHWL
Trigger: CAGCCAGTGCAGATTCAATCAGGATATGTGATTTTG...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATATCCTTTGCTCCGTCTaGAATATTGTCCCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: CSNKIDSMKGLESQEKENILCSV*NIVPVS
Trigger: GGAAACTGGGACAATATTTCAGACGGAGCAAAGGAT...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCATGTGCAGAGAAGTTGTaGGGACCTGGTGGACACCAA +
Preference number: 4 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSCAEKL*GPGGHQ
Trigger: TTGGTGTCCACCAGGTCCTCACAACTTCTCTGCACA...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAATCAGTCCTCACTGGGTaGTCAGAAATCATGCTGTTC +
Preference number: 4 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKSVLTG*SEIMLF
Trigger: GAACAGCATGATTTCTGATCACCCAGTGAGGACTGA...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATCATATGGAATCCCTTTaGGCCAAACAGAGGTGCTAT +
Preference number: 4 (lower is better)
Translates to: CSNKIDSMKGLESQEKENHMESL*AKQRCY
Trigger: ATAGCACCTCTGTTTGGCTCAAAGGGATTCCATATG...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTAAACTGTGCAGGATCTaGTTTCTCATAGCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGKLCRI*FLIAFL
Trigger: AAGGAAGGCTATGAGAAAGCAGATCCTGCACAGTTT...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTGAGCAACTCAAACTGTaGAGGATCTGCTTTCTCATA +
Preference number: 4 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGEQLKL*RICFLI
Trigger: TATGAGAAAGCAGATCCTGCACAGTTTGAGTTGCTC...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATGCATCATATCCCTGTTaGATAAGAACCTCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: CSNKIDSMKGLESQEKENASYPC*IRTSGA
Trigger: TGCACCTGAGGTTCTTATGCAACAGGGATATGATGC...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTCTTAAGGTTGTGGGTTaGCTAAACATATGGAATCCC +
Preference number: 4 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGLKVVG*LNIWNP
Trigger: GGGATTCCATATGTTTAGGCAACCCACAACCTTAAG...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATTCAGCACTCTGGGAATaGCCTCTCCTATTTACTACT +
Preference number: 4 (lower is better)
Translates to: CSNKIDSMKGLESQEKENSALWE*PLLFTT
Trigger: AGTAGTAAATAGGAGAGGCCATTCCCAGAGTGCTGA...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CCA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAAAGCATTTGCACTGGCTaGCAAACCGGGAGAATCTTT +
Preference number: 4 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKSICTG*QTGRIF
Trigger: AAAGATTCTCCCGGTTTGCCAGCCAGTGCAAATGCT...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTCTACTGACTCCTTGCTaGGTCCAAAATCTGTTAATT +
Preference number: 4 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGLLTPC*VQNLLI
Trigger: AATTAACAGATTTTGGACTCAGCAAGGAGTCAGTAG...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATCTTTTCTTGATCTACTaGCTCCTTGCTGAGTCCAAA +
Preference number: 4 (lower is better)
Translates to: CSNKIDSMKGLESQEKENLFLIY*LLAESK
Trigger: TTTGGACTCAGCAAGGAGTCAGTAGATCAAGAAAAG...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTTCAGCACTAAGAAATTaGGGCATTCCAAGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGSALRN*GIPSFA
Trigger: AGCAAAACTTGGAATGCCTCAATTTCTTAGTGCTGA...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTTCCCTTAACAACATGTaGCACATCATTTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGSLNNM*HIISLW
Trigger: CCAAAGAGAAATGATGTGTCACATGTTGTTAAGGGA...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTGCTCCTTCTACAAAATaGCAGTATGTTTTGAAGCTC +
Preference number: 4 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGAPSTK*QYVLKL
Trigger: GAGCTTCAAAACATACTGTCATTTTGTAGAAGGAGC...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAACATATGGAATCCCTTTaGGCCAAACAGAGGTGCTAT +
Preference number: 4 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKHMESL*AKQRCY
Trigger: ATAGCACCTCTGTTTGGCTCAAAGGGATTCCATATG...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATAAACTGTGCAGGATCTaGTTTCTCATAGCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: CSNKIDSMKGLESQEKENKLCRI*FLIAFL
Trigger: AAGGAAGGCTATGAGAAAGCAGATCCTGCACAGTTT...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAAAGTAGCAGTAGTAGCTaGTGCTGTTGTTGTAGCAAC +
Preference number: 4 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKSSSSS*CCCCSN
Trigger: GTTGCTACAACAACAGCAGCAGCTACTACTGCTACT...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CCA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAATCAGCACTCTGGGAATaGCCTCTCCTATTTACTACT +
Preference number: 4 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKSALWE*PLLFTT
Trigger: AGTAGTAAATAGGAGAGGCCATTCCCAGAGTGCTGA...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATAGTATACCGCTGATGTaGGTCCATATGAAGCATATG +
Preference number: 4 (lower is better)
Translates to: CSNKIDSMKGLESQEKENSIPLM*VHMKHM
Trigger: CATATGCTTCATATGGACCCACATCAGCGGTATACT...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CCA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAACTTTGGCTGATCATTTaGCAACTGGTCTCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKLWLII*QLVSVS
Trigger: ACTCACAGAGACCAGTTGCCAAATGATCAGCCAAAG...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTCCAAATCTGCATTTTTaGCTATGGAGTTCTAGCCAA +
Preference number: 4 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGPNLHF*LWSSSQ
Trigger: TTGGCTAGAACTCCATAGCCAAAAATGCAGATTTGG...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATGGTTGCCTAAACATATaGAATCCCTTTGAGCCAAAC +
Preference number: 4 (lower is better)
Translates to: CSNKIDSMKGLESQEKENGCLNI*NPFEPN
Trigger: GTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACC...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTGGCTATAGCAAACTGTaGTTGCTTCATAAAGCCTAT +
Preference number: 4 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGGYSKL*LLHKAY
Trigger: ATAGGCTTTATGAAGCAACCACAGTTTGCTATAGCC...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTGAATTCAAAAGTGCTTaGGATGTGTTGGCAAACCAA +
Preference number: 4 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGEFKSA*DVLANQ
Trigger: TTGGTTTGCCAACACATCCCAAGCACTTTTGAATTC...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATCTACTGACTCCTTGCTaGGTCCAAAATCTGTTAATT +
Preference number: 4 (lower is better)
Translates to: CSNKIDSMKGLESQEKENLLTPC*VQNLLI
Trigger: AATTAACAGATTTTGGACTCAGCAAGGAGTCAGTAG...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTTTGCTGGATTCCTTTTaGATAACATCCTTAGAAGAC +
Preference number: 4 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGLLDSF*ITSLED
Trigger: GTCTTCTAAGGATGTTATTCAAAAGGAATCCAGCAA...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAACAAAATCACATATCCTaGTTGAATCTGCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKQNHIS*LNLHWL
Trigger: CAGCCAGTGCAGATTCAATCAGGATATGTGATTTTG...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCAGGCAACTGGTCTCTGTaGGTTATCCATGAGTGCTTT +
Preference number: 4 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSGNWSL*VIHECF
Trigger: AAAGCACTCATGGATAACTCACAGAGACCAGTTGCC...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAATCATTTCTCTTTGGCTaGTCATTTGGCAACTGGTCT +
Preference number: 4 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKSFLFG*SFGNWS
Trigger: AGACCAGTTGCCAAATGATCAGCCAAAGAGAAATGA...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATTCCCTTAACAACATGTaGCACATCATTTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: CSNKIDSMKGLESQEKENSLNNM*HIISLW
Trigger: CCAAAGAGAAATGATGTGTCACATGTTGTTAAGGGA...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATGGATTCAAGGTAGAATaGTATGCTACACTGTACTTC +
Preference number: 4 (lower is better)
Translates to: CSNKIDSMKGLESQEKENGFKVE*YATLYF
Trigger: GAAGTACAGTGTAGCATATCATTCTACCTTGAATCC...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAAATAGAATGGATATCCTaGTTTGGGGAAGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKIEWIS*FGEEEE
Trigger: CTCTTCCTCTTCCCCAAATCAGGATATCCATTCTAT...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAAGAGCAACTCAAACTGTaGAGGATCTGCTTTCTCATA +
Preference number: 4 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKEQLKL*RICFLI
Trigger: TATGAGAAAGCAGATCCTGCACAGTTTGAGTTGCTC...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCAAGCAAGGGCCAGTTCTaGGAGGTAGAATTTCACATC +
Preference number: 4 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSSKGQF*EVEFHI
Trigger: GATGTGAAATTCTACCTCGCAGAACTGGCCCTTGCT...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTAAGAGAATTTTCCATTaGCTATACGCAGCAGTATCT +
Preference number: 4 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGKRIFH*LYAAVS
Trigger: AGATACTGCTGCGTATAGGCAATGGAAAATTCTCTT...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAACCCCATCACCAGCACTaGATTCGAATTTTCTTGAAA +
Preference number: 4 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKPHHQH*IRIFLK
Trigger: TTTCAAGAAAATTCGAATGCAGTGCTGGTGATGGGG...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAACTTAAGGTTGTGGGTTaGCTAAACATATGGAATCCC +
Preference number: 4 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKLKVVG*LNIWNP
Trigger: GGGATTCCATATGTTTAGGCAACCCACAACCTTAAG...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTAGTATTGCTGTGAGGTaGTCAAATAAGATAGATAGC +
Preference number: 4 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGSIAVR*SNKIDS
Trigger: GCTATCTATCTTATTTGAGCACCTCACAGCAATACT...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTTTAGGAATTCAAAAGTaGTTGGGATGTGTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGLGIQK*LGCVGK
Trigger: TTTGCCAACACATCCCAAGCACTTTTGAATTCCTAA...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CCA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAAGTTGTGAGGACCTGGTaGACACCAATTATATGCTTA +
Preference number: 4 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKVVRTW*TPIICL
Trigger: TAAGCATATAATTGGTGTCCACCAGGTCCTCACAAC...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATTATGATAGGACTGTATaGCATGACCTTTCTGAGCAA +
Preference number: 4 (lower is better)
Translates to: CSNKIDSMKGLESQEKENYDRTV*HDLSEQ
Trigger: TTGCTCAGAAAGGTCATGCCATACAGTCCTATCATA...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CCA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAAGGTTGCCTAAACATATaGAATCCCTTTGAGCCAAAC +
Preference number: 4 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKGCLNI*NPFEPN
Trigger: GTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACC...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTCTAGGTCCTAAAATCTaGAAAAGGGATCTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGLGPKI*KRDLEK
Trigger: TTTTTCCAGATCCCTTTTCCAGATTTTAGGACCTAG...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATGAATTCAAAAGTGCTTaGGATGTGTTGGCAAACCAA +
Preference number: 4 (lower is better)
Translates to: CSNKIDSMKGLESQEKENEFKSA*DVLANQ
Trigger: TTGGTTTGCCAACACATCCCAAGCACTTTTGAATTC...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTATAGTTTTTGAACACTaGGGATTGTTTAACTGCAGC +
Preference number: 4 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGIVFEH*GLFNCS
Trigger: GCTGCAGTTAAACAATCCCCAGTGTTCAAAAACTAT...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAAAAACATCTCCTCCCCTaGGAAAATCCAGTATTAAGT +
Preference number: 4 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKKHLLP*ENPVLS
Trigger: ACTTAATACTGGATTTTCTCAGGGGAGGAGATGTTT...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCACATAAGAACACCATATaGCCACCAATCAGCACTCTG +
Preference number: 4 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSHKNTI*PPISTL
Trigger: CAGAGTGCTGATTGGTGGTCATATGGTGTTCTTATG...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAATCAGCACTAAGAAATTaGGGCATTCCAAGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKSALRN*GIPSFA
Trigger: AGCAAAACTTGGAATGCCTCAATTTCTTAGTGCTGA...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCATTCCAGAAGCAGGTTTaGAAGGAGGTTGAACTTCTC +
Preference number: 4 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSFQKQV*KEVELL
Trigger: GAGAAGTTCAACCTCCTTTCAAACCTGCTTCTGGAA...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATTATTTCAATCTCTTCTaGAGGGTCTCGCTTACTTTT +
Preference number: 4 (lower is better)
Translates to: CSNKIDSMKGLESQEKENYFNLF*RVSLTF
Trigger: AAAAGTAAGCGAGACCCTTCAGAAGAGATTGAAATA...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCAATCCTTTGCTCCGTCTaGAATATTGTCCCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSILCSV*NIVPVS
Trigger: GGAAACTGGGACAATATTTCAGACGGAGCAAAGGAT...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATTGCAAACACATAGTATaGATATTGTGGACCTGTGAA +
Preference number: 4 (lower is better)
Translates to: CSNKIDSMKGLESQEKENCKHIV*ILWTCE
Trigger: TTCACAGGTCCACAATATTCATACTATGTGTTTGCA...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAAGCTCCTTCTACAAAATaGCAGTATGTTTTGAAGCTC +
Preference number: 4 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKAPSTK*QYVLKL
Trigger: GAGCTTCAAAACATACTGTCATTTTGTAGAAGGAGC...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTTTCTGCAATAGAAGTTaGAACAAAGCTGAATCCTTT +
Preference number: 4 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGFCNRS*NKAESF
Trigger: AAAGGATTCAGCTTTGTTGCAACTTCTATTGCAGAA...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCAGCATCATATCCCTGTTaGATAAGAACCTCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSASYPC*IRTSGA
Trigger: TGCACCTGAGGTTCTTATGCAACAGGGATATGATGC...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATAAGAGAATTTTCCATTaGCTATACGCAGCAGTATCT +
Preference number: 4 (lower is better)
Translates to: CSNKIDSMKGLESQEKENKRIFH*LYAAVS
Trigger: AGATACTGCTGCGTATAGGCAATGGAAAATTCTCTT...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATCAAGGTAGAATGATATaGTACACTGTACTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: CSNKIDSMKGLESQEKENQGRMI*YTVLQS
Trigger: GCTTTGAAGTACAGTGTAGCATATCATTCTACCTTG...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTATACTATATCATGTGTaGTATATGCACAAGTCCACT +
Preference number: 4 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGILYHV*YMHKST
Trigger: AGTGGACTTGTGCATATAGCACACATGATATAGTAT...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATATTCATGGTAGTATGTaGTTAAGGACAACAGGTTGT +
Preference number: 4 (lower is better)
Translates to: CSNKIDSMKGLESQEKENIHGSM*LRTTGC
Trigger: ACAACCTGTTGTCCTTAAGCACATACTACCATGAAT...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAAATCACCTTGTTAGATTaGCTGAAGATCCAGCAACTA +
Preference number: 4 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKITLLD*LKIQQL
Trigger: TAGTTGCTGGATCTTCAGGCAATCTAACAAGGTGAT...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATTTAGGAATTCAAAAGTaGTTGGGATGTGTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: CSNKIDSMKGLESQEKENLGIQK*LGCVGK
Trigger: TTTGCCAACACATCCCAAGCACTTTTGAATTCCTAA...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CCA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTAAGCAAAATGTTTTCTaGCTTCAGGTCTCTATAAAC +
Preference number: 4 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGKQNVF*LQVSIN
Trigger: GTTTATAGAGACCTGAAGCCAGAAAACATTTTGCTT...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CCA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAACACATCATTTCTCTTTaGCTGATCATTTGGCAACTG +
Preference number: 4 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKHIISL*LIIWQL
Trigger: CAGTTGCCAAATGATCAGCCAAAGAGAAATGATGTG...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATATAGTTTTTGAACACTaGGGATTGTTTAACTGCAGC +
Preference number: 4 (lower is better)
Translates to: CSNKIDSMKGLESQEKENIVFEH*GLFNCS
Trigger: GCTGCAGTTAAACAATCCCCAGTGTTCAAAAACTAT...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCAAAAAACCTTTCCAAATaGCCCCTGACCAAGAACCTT +
Preference number: 4 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSKNLSK*PLTKNL
Trigger: AAGGTTCTTGGTCAGGGGTCATTTGGAAAGGTTTTT...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAATACTGTACCACAAAATaGGTAAGCCTTCTTTTCTTG +
Preference number: 4 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKYCTTK*VSLLFL
Trigger: CAAGAAAAGAAGGCTTACTCATTTTGTGGTACAGTA...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCATTCTTCAACTCCTTCTaGTCCCAATCTATTTGCTGG +
Preference number: 4 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSFFNSF*SQSICW
Trigger: CCAGCAAATAGATTGGGATCAGAAGGAGTTGAAGAA...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAATATTTCAATCTCTTCTaGAGGGTCTCGCTTACTTTT +
Preference number: 4 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKYFNLF*RVSLTF
Trigger: AAAAGTAAGCGAGACCCTTCAGAAGAGATTGAAATA...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCATCATTTCTCTTTGGCTaGTCATTTGGCAACTGGTCT +
Preference number: 4 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSSFLFG*SFGNWS
Trigger: AGACCAGTTGCCAAATGATCAGCCAAAGAGAAATGA...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCATTCCATGTTGGTAGTTaGATGTATGCATCGCTTGCA +
Preference number: 4 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSFHVGS*MYASLA
Trigger: TGCAAGCGATGCATACATGCAACTACCAACATGGAA...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAACAAGGTAGAATGATATaGTACACTGTACTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKQGRMI*YTVLQS
Trigger: GCTTTGAAGTACAGTGTAGCATATCATTCTACCTTG...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAAATTCATGGTAGTATGTaGTTAAGGACAACAGGTTGT +
Preference number: 4 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKIHGSM*LRTTGC
Trigger: ACAACCTGTTGTCCTTAAGCACATACTACCATGAAT...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CCA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATAAGCAAAATGTTTTCTaGCTTCAGGTCTCTATAAAC +
Preference number: 4 (lower is better)
Translates to: CSNKIDSMKGLESQEKENKQNVF*LQVSIN
Trigger: GTTTATAGAGACCTGAAGCCAGAAAACATTTTGCTT...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCACATCTTCATCCAGTTTaGCCTAGGAACACCACAAAT +
Preference number: 4 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSHLHPV*PRNTTN
Trigger: ATTTGTGGTGTTCCTAGGCCAAACTGGATGAAGATG...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCAGTTGTGAGGACCTGGTaGACACCAATTATATGCTTA +
Preference number: 4 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSVVRTW*TPIICL
Trigger: TAAGCATATAATTGGTGTCCACCAGGTCCTCACAAC...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCACTGCATTTTTGGCTATaGAGTTCTAGCCAAACTGGA +
Preference number: 4 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSLHFWL*SSSQTG
Trigger: TCCAGTTTGGCTAGAACTCCATAGCCAAAAATGCAG...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAATTCTGCAATAGAAGTTaGAACAAAGCTGAATCCTTT +
Preference number: 4 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKFCNRS*NKAESF
Trigger: AAAGGATTCAGCTTTGTTGCAACTTCTATTGCAGAA...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAAATACTATATCATGTGTaGTATATGCACAAGTCCACT +
Preference number: 4 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKILYHV*YMHKST
Trigger: AGTGGACTTGTGCATATAGCACACATGATATAGTAT...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCAATCACCTTGTTAGATTaGCTGAAGATCCAGCAACTA +
Preference number: 4 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSITLLD*LKIQQL
Trigger: TAGTTGCTGGATCTTCAGGCAATCTAACAAGGTGAT...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAATATCTTGAGAACTGTTaGTCACAGAGTTTTAACAAG +
Preference number: 4 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKYLENC*SQSFNK
Trigger: CTTGTTAAAACTCTGTGAGCAACAGTTCTCAAGATA...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCATTCTCCCTCTTCCATTaGCTCATCAACCATTTTAAG +
Preference number: 4 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSFSLFH*LINHFK
Trigger: CTTAAAATGGTTGATGAGCCAATGGAAGAGGGAGAA...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCACACATCATTTCTCTTTaGCTGATCATTTGGCAACTG +
Preference number: 4 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSHIISL*LIIWQL
Trigger: CAGTTGCCAAATGATCAGCCAAAGAGAAATGATGTG...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCAAGTGAGTCAAATGAATaGAGTCCTTTGGTTTTACGG +
Preference number: 4 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSSESNE*SPLVLR
Trigger: CCGTAAAACCAAAGGACTCCATTCATTTGACTCACT...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCACCAAATCTGCATTTTTaGCTATGGAGTTCTAGCCAA +
Preference number: 4 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSPNLHF*LWSSSQ
Trigger: TTGGCTAGAACTCCATAGCCAAAAATGCAGATTTGG...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCAGGCTATAGCAAACTGTaGTTGCTTCATAAAGCCTAT +
Preference number: 4 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSGYSKL*LLHKAY
Trigger: ATAGGCTTTATGAAGCAACCACAGTTTGCTATAGCC...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR TCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCAGCTTACTTTTGTCAATaGTCTTCACTGCAAATTCCA +
Preference number: 4 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSAYFCQ*SSLQIP
Trigger: TGGAATTTGCAGTGAAGATCATTGACAAAAGTAAGC...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCAGATAATATACAGATCTaGCTGCACACATTATCTGAG +
Preference number: 4 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSDNIQI*LHTLSE
Trigger: CTCAGATAATGTGTGCAGGCAGATCTGTATATTATC...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCAAGTATTGCTGTGAGGTaGTCAAATAAGATAGATAGC +
Preference number: 4 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSSIAVR*SNKIDS
Trigger: GCTATCTATCTTATTTGAGCACCTCACAGCAATACT...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCACTAGGTCCTAAAATCTaGAAAAGGGATCTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSLGPKI*KRDLEK
Trigger: TTTTTCCAGATCCCTTTTCCAGATTTTAGGACCTAG...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCATACTTCACCAAATTGTaGAGCATTTCCATTTATCTG +
Preference number: 4 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSYFTKL*SISIYL
Trigger: CAGATAAATGGAAATGCTGCACAATTTGGTGAAGTA...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCATGTTCAATCCAAATCTaGATTTTTGGCTATGGAGTT +
Preference number: 4 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSCSIQI*IFGYGV
Trigger: AACTCCATAGCCAAAAATGCAGATTTGGATTGAACA...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR GCA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCATATCTTGAGAACTGTTaGTCACAGAGTTTTAACAAG +
Preference number: 4 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSYLENC*SQSFNK
Trigger: CTTGTTAAAACTCTGTGAGCAACAGTTCTCAAGATA...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
3UTR CAA 72 bp TATGGAAGTTTCTCTGGGCAGTACTATTTTAACATGTaGTTCCAATGGGCAGACATTATAAATACCAAGCAT +
Preference number: 4 (lower is better)
Translates to: YGSFSGQYYFNM*FQWADIINTKH
Trigger: ATGCTTGGTATTTATAATGTCTGCCCATTGGAACAACATGTTAAAATAGTACTGCCCAGAGAAACTTCCATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS GCA 90 bp CGCCGCCGCCGCCGCCCGGTGATTCCCATAGAGAAGACAACTCTGTaGTGCCTCTCCAAGAGCTGCCGCTCGGCTCGCGCTCACCACTGC +
Preference number: 5 (lower is better)
Translates to: RRRRRPVIPIEKTTL*CLSKSCRSARAHHC
Trigger: GCAGTGGTGAGCGCGAGCCGAGCGGCAGCTCTTGGAGAGGCAGCACAGAGTTGTCTTCTCTATGGGAATCACCGGGCGGCGGCGGCGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262752.5
CDS CCA 90 bp CATCTCCCCTTCAGGAGCACTCAAACAGGAGCTGCCGCCTACCGCTaGCGCGGCCGCGCATCCTGTCTATTGAACTGGCCCGCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: HLPFRSTQTGAAAYR*RGRASCLLNWPAAA
Trigger: GGCGGCGGCGGGCCAGTTCAATAGACAGGATGCGCGGCCGCGCCAGCGGTAGGCGGCAGCTCCTGTTTGAGTGCTCCTGAAGGGGAGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262752.5
CDS GCA 90 bp CGCCGCCGCCGCCCGGTGATTCCCATAGAGAAGACAACTCTGTGCTaGCTCTCCAAGAGCTGCCGCTCGGCTCGCGCTCACCACTGCCAC +
Preference number: 5 (lower is better)
Translates to: RRRRPVIPIEKTTLC*LSKSCRSARAHHCH
Trigger: GTGGCAGTGGTGAGCGCGAGCCGAGCGGCAGCTCTTGGAGAGGCAGCACAGAGTTGTCTTCTCTATGGGAATCACCGGGCGGCGGCGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262752.5
CDS GCA 90 bp GTGATTCCCATAGAGAAGACAACTCTGTGCTGCCTCTCCAAGAGCTaGCGCTCGGCTCGCGCTCACCACTGCCACCACAACGACAGCCGC +
Preference number: 5 (lower is better)
Translates to: VIPIEKTTLCCLSKS*RSARAHHCHHNDSR
Trigger: GCGGCTGTCGTTGTGGTGGCAGTGGTGAGCGCGAGCCGAGCGGCAGCTCTTGGAGAGGCAGCACAGAGTTGTCTTCTCTATGGGAATCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262752.5
CDS GCA 90 bp GAGCGAATGGTAGCATCTCCCCTTCAGGAGCACTCAAACAGGAGCTaGCGCCTACCGCTGGCGCGGCCGCGCATCCTGTCTATTGAACTG +
Preference number: 5 (lower is better)
Translates to: ERMVASPLQEHSNRS*RLPLARPRILSIEL
Trigger: CAGTTCAATAGACAGGATGCGCGGCCGCGCCAGCGGTAGGCGGCAGCTCCTGTTTGAGTGCTCCTGAAGGGGAGATGCTACCATTCGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262752.5
CDS TCA 90 bp CCGCCGCCGCTGAACACTTCCATTTCTCGGTCCCAGGGCTCGTCCTaGGGAGCGAATGGTAGCATCTCCCCTTCAGGAGCACTCAAACAG +
Preference number: 5 (lower is better)
Translates to: PPPLNTSISRSQGSS*GANGSISPSGALKQ
Trigger: CTGTTTGAGTGCTCCTGAAGGGGAGATGCTACCATTCGCTCCTCAGGACGAGCCCTGGGACCGAGAAATGGAAGTGTTCAGCGGCGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262752.5
CDS-3UTR CAA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTCGCGCATCCTGTCTATaGAACTGGCCCGCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGRASCL*NWPAAA
Trigger: GGCGGCGGCGGGCCAGTTCAATAGACAGGATGCGCG...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262752.5
CDS GCA 90 bp AGGAACACCACAAATCTTACAGGCCAGTTGATGTTCGCTTTTTCATaGTCCGTCGCTGGGCTAAGCTTGAAGCAGCTACAGGCTCTAGGA +
Preference number: 5 (lower is better)
Translates to: RNTTNLTGQLMFAFS*SVAGLSLKQLQALG
Trigger: TCCTAGAGCCTGTAGCTGCTTCAAGCTTAGCCCAGCGACGGAGCATGAAAAAGCGAACATCAACTGGCCTGTAAGATTTGTGGTGTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATAGAGCTGATGAGCATTaGCACTGGCTGGCAAACCGG +
Preference number: 5 (lower is better)
Translates to: CSNKIDSMKGLESQEKENRADEH*HWLANR
Trigger: CCGGTTTGCCAGCCAGTGCAAATGCTCATCAGCTCT...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAAAGAGCTGATGAGCATTaGCACTGGCTGGCAAACCGG +
Preference number: 5 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKRADEH*HWLANR
Trigger: CCGGTTTGCCAGCCAGTGCAAATGCTCATCAGCTCT...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAAGTCGCTGGGCTAAGCTaGAAGCAGCTACAGGCTCTA +
Preference number: 5 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKVAGLS*KQLQAL
Trigger: TAGAGCCTGTAGCTGCTTCAAGCTTAGCCCAGCGAC...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAACCGGCCGGCTGTTTCTaGATAGACTGCTTTCCTGCT +
Preference number: 5 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKPAGCF*IDCFPA
Trigger: AGCAGGAAAGCAGTCTATCAAGAAACAGCCGGCCGG...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTTATCCCTCTCCATCTTaGTCCGAACTCTGTCTCGAA +
Preference number: 5 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGYPSPS*SELCLE
Trigger: TTCGAGACAGAGTTCGGACAAAGATGGAGAGGGATA...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTAGCATCATATCCCTGTaGCATAAGAACCTCAGGTGC +
Preference number: 5 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGSIISL*HKNLRC
Trigger: GCACCTGAGGTTCTTATGCAACAGGGATATGATGCT...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATAGCATCATATCCCTGTaGCATAAGAACCTCAGGTGC +
Preference number: 5 (lower is better)
Translates to: CSNKIDSMKGLESQEKENSIISL*HKNLRC
Trigger: GCACCTGAGGTTCTTATGCAACAGGGATATGATGCT...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTTCTTCAGGAGTATCATaGGGGCCATTAGCAAATGGA +
Preference number: 5 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGSSGVS*GPLANG
Trigger: TCCATTTGCTAATGGCCCCAATGATACTCCTGAAGA...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTAATGGATATCCTGATTaGGGGAAGAGGAAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGNGYPD*GKRKRK
Trigger: CTTCCTCTTCCTCTTCCCCAAATCAGGATATCCATT...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTGACTCCATGAGTAGTTaGGATTCAATCTCTCTGTGC +
Preference number: 5 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGDSMSS*DSISLC
Trigger: GCACAGAGAGATTGAATCCAAACTACTCATGGAGTC...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCACCGGCCGGCTGTTTCTaGATAGACTGCTTTCCTGCT +
Preference number: 5 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSPAGCF*IDCFPA
Trigger: AGCAGGAAAGCAGTCTATCAAGAAACAGCCGGCCGG...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTGGAATTCAAAAGTGCTaGGGATGTGTTGGCAAACCA +
Preference number: 5 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGGIQKC*GCVGKP
Trigger: TGGTTTGCCAACACATCCCAAGCACTTTTGAATTCC...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTTTGCAGCCTTTTTATTaGGTACCCAGAGAATGCCAG +
Preference number: 5 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGLQPFY*VPRECQ
Trigger: CTGGCATTCTCTGGGTACCAAATAAAAAGGCTGCAA...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTTTTTTAACACCTTCATaGCATAGAGCTGCCCAGCAT +
Preference number: 5 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGFLTPS*HRAAQH
Trigger: ATGCTGGGCAGCTCTATGCAATGAAGGTGTTAAAAA...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTTATCACCTTGTTAGATaGCCTGAAGATCCAGCAACT +
Preference number: 5 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGYHLVR*PEDPAT
Trigger: AGTTGCTGGATCTTCAGGCAATCTAACAAGGTGATA...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTTTCAGCACTAAGAAATaGAGGCATTCCAAGTTTTGC +
Preference number: 5 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGFSTKK*RHSKFC
Trigger: GCAAAACTTGGAATGCCTCAATTTCTTAGTGCTGAA...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTACGATGAACAACTCCTaGACAATGAAGATAGTCAAC +
Preference number: 5 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGTMNNS*TMKIVN
Trigger: GTTGACTATCTTCATTGTCAAGGAGTTGTTCATCGT...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATGGGAAAGCAAATCCTTaGCTCCGTCTGAAATATTGT +
Preference number: 5 (lower is better)
Translates to: CSNKIDSMKGLESQEKENGKANP*LRLKYC
Trigger: ACAATATTTCAGACGGAGCAAAGGATTTGCTTTCCC...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTACACATCATTTCTCTTaGGCTGATCATTTGGCAACT +
Preference number: 5 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGTHHFS*ADHLAT
Trigger: AGTTGCCAAATGATCAGCCAAAGAGAAATGATGTGT...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATAATCTTACAGGCCAGTaGATGTTCGCTTTTTCATGC +
Preference number: 5 (lower is better)
Translates to: CSNKIDSMKGLESQEKENNLTGQ*MFAFSC
Trigger: GCATGAAAAAGCGAACATCAACTGGCCTGTAAGATT...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAATCCCATATAATAAGGTaGCCCCCTACTACTGTGGTT +
Preference number: 5 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKSHIIR*PPTTVV
Trigger: AACCACAGTAGTAGGGGGCAACCTTATTATATGGGA...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAAACATATGGAATCCCTTaGAGCCAAACAGAGGTGCTA +
Preference number: 5 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKTYGIP*SQTEVL
Trigger: TAGCACCTCTGTTTGGCTCAAAGGGATTCCATATGT...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAAAATGGATATCCTGATTaGGGGAAGAGGAAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKNGYPD*GKRKRK
Trigger: CTTCCTCTTCCTCTTCCCCAAATCAGGATATCCATT...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAATTTTTAACACCTTCATaGCATAGAGCTGCCCAGCAT +
Preference number: 5 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKFLTPS*HRAAQH
Trigger: ATGCTGGGCAGCTCTATGCAATGAAGGTGTTAAAAA...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCATATCCCTCTCCATCTTaGTCCGAACTCTGTCTCGAA +
Preference number: 5 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSYPSPS*SELCLE
Trigger: TTCGAGACAGAGTTCGGACAAAGATGGAGAGGGATA...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTAATAATGTTGGGATGTaGTCCATAGCGCATCAATAT +
Preference number: 5 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGNNVGM*SIAHQY
Trigger: ATATTGATGCGCTATGGACAACATCCCAACATTATT...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATCTCCTCGAAGTTGTTTaGCAAACCCAAAATCACATA +
Preference number: 5 (lower is better)
Translates to: CSNKIDSMKGLESQEKENLLEVV*QTQNHI
Trigger: TATGTGATTTTGGGTTTGCAAAACAACTTCGAGGAG...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCATCTTTGGCTGATCATTaGGCAACTGGTCTCTGTGAG +
Preference number: 5 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSSLADH*ATGLCE
Trigger: CTCACAGAGACCAGTTGCCAAATGATCAGCCAAAGA...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATCCAGGAAACAGATATTaGTGCATGGGGTATAGATTA +
Preference number: 5 (lower is better)
Translates to: CSNKIDSMKGLESQEKENPGNRY*CMGYRL
Trigger: TAATCTATACCCCATGCACAAATATCTGTTTCCTGG...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTAGGTTGTTAGTCTATTaGAGCAAACCTGATGTTTTC +
Preference number: 5 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGRLLVY*SKPDVF
Trigger: GAAAACATCAGGTTTGCTCAAATAGACTAACAACCT...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAAGGGATCTGGAAAAATTaGGACTCCATGAGTAGTTTG +
Preference number: 5 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKGIWKN*DSMSSL
Trigger: CAAACTACTCATGGAGTCCAAATTTTTCCAGATCCC...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp CTTAAGGTTGTGGGTTGCCTAAACATATGGAATCCCTTTGAGCCAAACAGAGGTTATAGCAAACTGTGGTaGCTTCATAAAGCCTATGTA +
Preference number: 5 (lower is better)
Translates to: LKVVGCLNIWNPFEPNRGYSKLW*LHKAYV
Trigger: TACATAGGCTTTATGAAGCAACCACAGTTTGCTATA...ACCTCTGTTTGGCTCAAAGGGATTCCATATGTTTAGGCAACCCACAACCTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAATTCAGCACTAAGAAATaGAGGCATTCCAAGTTTTGC +
Preference number: 5 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKFSTKK*RHSKFC
Trigger: GCAAAACTTGGAATGCCTCAATTTCTTAGTGCTGAA...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATAATAATGTTGGGATGTaGTCCATAGCGCATCAATAT +
Preference number: 5 (lower is better)
Translates to: CSNKIDSMKGLESQEKENNNVGM*SIAHQY
Trigger: ATATTGATGCGCTATGGACAACATCCCAACATTATT...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATTTCCGAGAAACATTTTaGTTTGAGAATACGGTCAAG +
Preference number: 5 (lower is better)
Translates to: CSNKIDSMKGLESQEKENFRETF*FENTVK
Trigger: CTTGACCGTATTCTCAAACAAAAATGTTTCTCGGAA...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCATCTTCAGGAGTATCATaGGGGCCATTAGCAAATGGA +
Preference number: 5 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSSSGVS*GPLANG
Trigger: TCCATTTGCTAATGGCCCCAATGATACTCCTGAAGA...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAAAAAGAGAATTTTCCATaGCCTATACGCAGCAGTATC +
Preference number: 5 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKKENFP*PIRSSI
Trigger: GATACTGCTGCGTATAGGCAATGGAAAATTCTCTTT...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAAACACATCATTTCTCTTaGGCTGATCATTTGGCAACT +
Preference number: 5 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKTHHFS*ADHLAT
Trigger: AGTTGCCAAATGATCAGCCAAAGAGAAATGATGTGT...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCAGACTCCATGAGTAGTTaGGATTCAATCTCTCTGTGC +
Preference number: 5 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSDSMSS*DSISLC
Trigger: GCACAGAGAGATTGAATCCAAACTACTCATGGAGTC...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATCAACAATCATTGATCTaGAGGTACATGCCAAAAATG +
Preference number: 5 (lower is better)
Translates to: CSNKIDSMKGLESQEKENQQSLI*RYMPKM
Trigger: CATTTTTGGCATGTACCTCAAGATCAATGATTGTTG...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp TGCTCAAATAAGATAGATAGCATGAAGGGGCTGGAAAGCCAGGAGAAAGAGAATTATAGCAAACTGTGGTaGCTTCATAAAGCCTATGTA +
Preference number: 5 (lower is better)
Translates to: CSNKIDSMKGLESQEKENYSKLW*LHKAYV
Trigger: TACATAGGCTTTATGAAGCAACCACAGTTTGCTATA...ATTCTCTTTCTCCTGGCTTTCCAGCCCCTTCATGCTATCTATCTTATTTGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAATTTGAACACTGGGGATaGTTTAACTGCAGCTTTGAA +
Preference number: 5 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKFEHWG*FNCSFE
Trigger: TTCAAAGCTGCAGTTAAACAATCCCCAGTGTTCAAA...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCAGGGAAAGCAAATCCTTaGCTCCGTCTGAAATATTGT +
Preference number: 5 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSGKANP*LRLKYC
Trigger: ACAATATTTCAGACGGAGCAAAGGATTTGCTTTCCC...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCAAATCTTACAGGCCAGTaGATGTTCGCTTTTTCATGC +
Preference number: 5 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSNLTGQ*MFAFSC
Trigger: GCATGAAAAAGCGAACATCAACTGGCCTGTAAGATT...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAAAGGTTGTTAGTCTATTaGAGCAAACCTGATGTTTTC +
Preference number: 5 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKRLLVY*SKPDVF
Trigger: GAAAACATCAGGTTTGCTCAAATAGACTAACAACCT...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAACTTAAGGACAACAGGTaGTTAGTCTATTTGAGCAAA +
Preference number: 5 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKLKDNR*LVYLSK
Trigger: TTTGCTCAAATAGACTAACAACCTGTTGTCCTTAAG...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAACCAGCAACTAAAAACTaGATTAATGCACAACTTCCT +
Preference number: 5 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKPATKN*INAQLP
Trigger: AGGAAGTTGTGCATTAATCAAGTTTTTAGTTGCTGG...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCAGGGATCTGGAAAAATTaGGACTCCATGAGTAGTTTG +
Preference number: 5 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSGIWKN*DSMSSL
Trigger: CAAACTACTCATGGAGTCCAAATTTTTCCAGATCCC...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp AGTAGTAGCTGCTGCTGTTGTTGTAGCAACGGTATTTTCTTCAACAACGTGAAACAACAATCATTGATCTaGAGGTACATGCCAAAAATG +
Preference number: 5 (lower is better)
Translates to: SSSCCCCCSNGIFFNNVKQQSLI*RYMPKM
Trigger: CATTTTTGGCATGTACCTCAAGATCAATGATTGTTG...TTTCACGTTGTTGAAGAAAATACCGTTGCTACAACAACAGCAGCAGCTACTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCACTCCTCGAAGTTGTTTaGCAAACCCAAAATCACATA +
Preference number: 5 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSLLEVV*QTQNHI
Trigger: TATGTGATTTTGGGTTTGCAAAACAACTTCGAGGAG...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCACCAGGAAACAGATATTaGTGCATGGGGTATAGATTA +
Preference number: 5 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSPGNRY*CMGYRL
Trigger: TAATCTATACCCCATGCACAAATATCTGTTTCCTGG...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCATTTGAACACTGGGGATaGTTTAACTGCAGCTTTGAA +
Preference number: 5 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSFEHWG*FNCSFE
Trigger: TTCAAAGCTGCAGTTAAACAATCCCCAGTGTTCAAA...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS-3UTR CAA 90 bp AAATCTGGAAAAGGGATCTGGAAAAATTTGGACTCCATGAGTAGTTTGGATTCATTCCGAGAAACATTTTaGTTTGAGAATACGGTCAAG +
Preference number: 5 (lower is better)
Translates to: KSGKGIWKNLDSMSSLDSFRETF*FENTVK
Trigger: CTTGACCGTATTCTCAAACAAAAATGTTTCTCGGAA...TGAATCCAAACTACTCATGGAGTCCAAATTTTTCCAGATCCCTTTTCCAGATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS CAA 90 bp ACAGGAGCTGCCGCCTACCGCTGGCGCGGCCGCGCATCCTGTCTATaGAACTGGCCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCG +
Preference number: 6 (lower is better)
Translates to: TGAAAYRWRGRASCL*NWPAAAAAAAAAAA
Trigger: CGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGGCCAGTTCAATAGACAGGATGCGCGGCCGCGCCAGCGGTAGGCGGCAGCTCCTGT
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262752.5
CDS TCA 72 bp AGCCAGCAAACTCGCCGCTGCTCGCGCCGCCGCCGCTaGACACTTCCATTTCTCGGTCCCAGGGCTCGTCCT +
Preference number: 6 (lower is better)
Translates to: SQQTRRCSRRRR*TLPFLGPRARP
Trigger: AGGACGAGCCCTGGGACCGAGAAATGGAAGTGTTCAGCGGCGGCGGCGCGAGCAGCGGCGAGTTTGCTGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460730.1
CDS TCA 72 bp GACCATTTACCTCGCCGCTGCTCGCGCCGCCGCCGCTaGACACTTCCATTTCTCGGTCCCAGGGCTCGTCCT +
Preference number: 6 (lower is better)
Translates to: DHLPRRCSRRRR*TLPFLGPRARP
Trigger: AGGACGAGCCCTGGGACCGAGAAATGGAAGTGTTCAGCGGCGGCGGCGCGAGCAGCGGCGAGGTAAATGGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262752.5
CDS GCA 72 bp GTAGCATCTCCCCTTCAGGAGCACTCAAACAGGAGCTaGCGCCTACCGCTGGCGCGGCCGCGCATCCTGTCT +
Preference number: 6 (lower is better)
Translates to: VASPLQEHSNRS*RLPLARPRILS
Trigger: AGACAGGATGCGCGGCCGCGCCAGCGGTAGGCGGCAGCTCCTGTTTGAGTGCTCCTGAAGGGGAGATGCTAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262752.5
CDS GCA 72 bp CGCCGCCCGGTGATTCCCATAGAGAAGACAACTCTGTaGTGCCTCTCCAAGAGCTGCCGCTCGGCTCGCGCT +
Preference number: 6 (lower is better)
Translates to: RRPVIPIEKTTL*CLSKSCRSARA
Trigger: AGCGCGAGCCGAGCGGCAGCTCTTGGAGAGGCAGCACAGAGTTGTCTTCTCTATGGGAATCACCGGGCGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262752.5
CDS CCA 72 bp TTCAGGAGCACTCAAACAGGAGCTGCCGCCTACCGCTaGCGCGGCCGCGCATCCTGTCTATTGAACTGGCCC +
Preference number: 6 (lower is better)
Translates to: FRSTQTGAAAYR*RGRASCLLNWP
Trigger: GGGCCAGTTCAATAGACAGGATGCGCGGCCGCGCCAGCGGTAGGCGGCAGCTCCTGTTTGAGTGCTCCTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262752.5
CDS GCA 72 bp CGCCCGGTGATTCCCATAGAGAAGACAACTCTGTGCTaGCTCTCCAAGAGCTGCCGCTCGGCTCGCGCTCAC +
Preference number: 6 (lower is better)
Translates to: RPVIPIEKTTLC*LSKSCRSARAH
Trigger: GTGAGCGCGAGCCGAGCGGCAGCTCTTGGAGAGGCAGCACAGAGTTGTCTTCTCTATGGGAATCACCGGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262752.5
CDS GCA 72 bp ATAGAGAAGACAACTCTGTGCTGCCTCTCCAAGAGCTaGCGCTCGGCTCGCGCTCACCACTGCCACCACAAC +
Preference number: 6 (lower is better)
Translates to: IEKTTLCCLSKS*RSARAHHCHHN
Trigger: GTTGTGGTGGCAGTGGTGAGCGCGAGCCGAGCGGCAGCTCTTGGAGAGGCAGCACAGAGTTGTCTTCTCTAT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262752.5
CDS TCA 72 bp CTGAACACTTCCATTTCTCGGTCCCAGGGCTCGTCCTaGGGAGCGAATGGTAGCATCTCCCCTTCAGGAGCA +
Preference number: 6 (lower is better)
Translates to: LNTSISRSQGSS*GANGSISPSGA
Trigger: TGCTCCTGAAGGGGAGATGCTACCATTCGCTCCTCAGGACGAGCCCTGGGACCGAGAAATGGAAGTGTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262752.5
CDS CCA 72 bp AGGCCAGTTGATGTTCGCTTTTTCATGCTCCGTCGCTaGGCTAAGCTTGAAGCAGCTACAGGCTCTAGGACT +
Preference number: 6 (lower is better)
Translates to: RPVDVRFFMLRR*AKLEAATGSRT
Trigger: AGTCCTAGAGCCTGTAGCTGCTTCAAGCTTAGCCCAGCGACGGAGCATGAAAAAGCGAACATCAACTGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS CCA 72 bp GAAAAGGATCCAACTTTCTTGGTGTGTTTGTTGCACTaGGTTCGTAAAGCGTCCGGGGTTCAACAGCGAGCT +
Preference number: 6 (lower is better)
Translates to: EKDPTFLVCLLH*VRKASGVQQRA
Trigger: AGCTCGCTGTTGAACCCCGGACGCTTTACGAACCCAGTGCAACAAACACACCAAGAAAGTTGGATCCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460730.1
CDS CAA 72 bp GTTTGGCCTAGGAACACCACAAATCTTACAGGCCAGTaGATGTTCGCTTTTTCATGCTCCGTCGCTGGGCTA +
Preference number: 6 (lower is better)
Translates to: VWPRNTTNLTGQ*MFAFSCSVAGL
Trigger: TAGCCCAGCGACGGAGCATGAAAAAGCGAACATCAACTGGCCTGTAAGATTTGTGGTGTTCCTAGGCCAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS CAA 90 bp CTTCATCCAGTTTGGCCTAGGAACACCACAAATCTTACAGGCCAGTaGATGTTCGCTTTTTCATGCTCCGTCGCTGGGCTAAGCTTGAAG +
Preference number: 6 (lower is better)
Translates to: LHPVWPRNTTNLTGQ*MFAFSCSVAGLSLK
Trigger: CTTCAAGCTTAGCCCAGCGACGGAGCATGAAAAAGCGAACATCAACTGGCCTGTAAGATTTGTGGTGTTCCTAGGCCAAACTGGATGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS GCA 72 bp TATCAGAAAAGGATCCAACTTTCTTGGTGTGTTTGTTaGACTGGGTTCGTAAAGCGTCCGGGGTTCAACAGC +
Preference number: 6 (lower is better)
Translates to: YQKRIQLSWCVC*TGFVKRPGFNS
Trigger: GCTGTTGAACCCCGGACGCTTTACGAACCCAGTGCAACAAACACACCAAGAAAGTTGGATCCTTTTCTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460730.1
CDS CCA 72 bp GAATCCTTTGAAGAGCTGATGAGCATTTGCACTGGCTaGCAAACCGGGAGAATCTTTAGGTGTTTTTGCAGT +
Preference number: 6 (lower is better)
Translates to: ESFEELMSICTG*QTGRIFRCFCS
Trigger: ACTGCAAAAACACCTAAAGATTCTCCCGGTTTGCCAGCCAGTGCAAATGCTCATCAGCTCTTCAAAGGATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4
CDS CAA 72 bp CAACATGTGACACATCATTTCTCTTTGGCTGATCATTaGGCAACTGGTCTCTGTGAGTTATCCATGAGTGCT +
Preference number: 6 (lower is better)
Translates to: QHVTHHFSLADH*ATGLCELSMSA
Trigger: AGCACTCATGGATAACTCACAGAGACCAGTTGCCAAATGATCAGCCAAAGAGAAATGATGTGTCACATGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262752.5
ENST00000620340.4