RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RPS6KA5 (Homo sapiens)

Ensembl gene IDs: ENSG00000100784

Ensembl transcript IDs: ENST00000418736.6, ENST00000536315.6, ENST00000554206.1, ENST00000556178.5, ENST00000556304.1, ENST00000556594.1, ENST00000614987.5, ENST00000648062.1

Found 876 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCTTCCCTTAGGTGGGAGAAAGAAGGAATACCATGGAGGTGTGTGTaGATGTGTACGCACACAGGAGAGAGTCGGGGCTGGTGGGGAGGC +
Preference number: 1 (lower is better)
Translates to: ASLRWEKEGIPWRCV*MCTHTGESRGWWGG
Trigger: GCCTCCCCACCAGCCCCGACTCTCTCCTGTGTGCGTACACATCCACACACACCTCCATGGTATTCCTTCTTTCTCCCACCTAAGGGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR CCA 90 bp CCACAGGTCACAGGACTCATCGTAGCCGTTCTGATTCAAGAGCTCTaGGGCGGCATAATGAAGGGTGAAGCATGGAGTCTTCAGGGGCTG +
Preference number: 1 (lower is better)
Translates to: PQVTGLIVAVLIQEL*GGIMKGEAWSLQGL
Trigger: CAGCCCCTGAAGACTCCATGCTTCACCCTTCATTATGCCGCCCCAGAGCTCTTGAATCAGAACGGCTACGATGAGTCCTGTGACCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR TCA 90 bp CGTAGCCGTTCTGATTCAAGAGCTCTGGGGCGGCATAATGAAGGGTaGAGCATGGAGTCTTCAGGGGCTGATTATCCGGTGGCTTTAGCC +
Preference number: 1 (lower is better)
Translates to: RSRSDSRALGRHNEG*SMESSGADYPVALA
Trigger: GGCTAAAGCCACCGGATAATCAGCCCCTGAAGACTCCATGCTTCACCCTTCATTATGCCGCCCCAGAGCTCTTGAATCAGAACGGCTACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR CCA 90 bp ACGGTGACCTGGACTGCAGCAAGATCGGGCACAGCTTCCCTTAGGTaGGAGAAAGAAGGAATACCATGGAGGTGTGTGTGGATGTGTACG +
Preference number: 1 (lower is better)
Translates to: TVTWTAARSGTASLR*EKEGIPWRCVWMCT
Trigger: CGTACACATCCACACACACCTCCATGGTATTCCTTCTTTCTCCCACCTAAGGGAAGCTGTGCCCGATCTTGCTGCAGTCCAGGTCACCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR TCA 90 bp CAGATCCCTGTGCACCACTCCAACATCATGCATGTGGCTTACAGCTaGAACAAGCTTCCTCATGATGTAGCTGGCTTCCGTCTCACTGAA +
Preference number: 1 (lower is better)
Translates to: QIPVHHSNIMHVAYS*NKLPHDVAGFRLTE
Trigger: TTCAGTGAGACGGAAGCCAGCTACATCATGAGGAAGCTTGTTTCAGCTGTAAGCCACATGCATGATGTTGGAGTGGTGCACAGGGATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR CCA 90 bp CGGCAGCTCCGGAAGATCCTAGAATATCCGGAGTCATCAGAGGATTaGAGGACAGCTGACTTCCATCTTGTAGCCATTCATTGTACCTCA +
Preference number: 1 (lower is better)
Translates to: RQLRKILEYPESSED*RTADFHLVAIHCTS
Trigger: TGAGGTACAATGAATGGCTACAAGATGGAAGTCAGCTGTCCTCCAATCCTCTGATGACTCCGGATATTCTAGGATCTTCCGGAGCTGCCG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR GCA 90 bp CTCTTGTATTTGTTAAAGGCGTGGAAGGTTGCTTTCACACAGGTATaGACGGCAGCTCCGGAAGATCCTAGAATATCCGGAGTCATCAGA +
Preference number: 1 (lower is better)
Translates to: LLYLLKAWKVAFTQV*TAAPEDPRISGVIR
Trigger: TCTGATGACTCCGGATATTCTAGGATCTTCCGGAGCTGCCGTGCATACCTGTGTGAAAGCAACCTTCCACGCCTTTAACAAATACAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR GCA 90 bp AATACCAAGCCACAGGTGCTCAAGATGGCGAATCTGTCCTCCCAGTaGAGCCTAGTTTCTATGGAGCTACCATATATGACAGTGTCCTAT +
Preference number: 1 (lower is better)
Translates to: NTKPQVLKMANLSSQ*SLVSMELPYMTVSY
Trigger: ATAGGACACTGTCATATATGGTAGCTCCATAGAAACTAGGCTGCACTGGGAGGACAGATTCGCCATCTTGAGCACCTGTGGCTTGGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR CCA 90 bp AAAATCCCAGAGCGAAGAAACCTCAGGGAAGTGAGCCTGAAATACTaGTACAGTATCTCCTTGAGGTGTCTGCCAATTGCAGACTCCTGT +
Preference number: 1 (lower is better)
Translates to: KIPERRNLREVSLKY*YSISLRCLPIADSC
Trigger: ACAGGAGTCTGCAATTGGCAGACACCTCAAGGAGATACTGTACCAGTATTTCAGGCTCACTTCCCTGAGGTTTCTTCGCTCTGGGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR GCA 90 bp CTGGTACAGTATCTCCTTGAGGTGTCTGCCAATTGCAGACTCCTGTaGAACAAGGTGAGACTTCAAGAAATCCAGCAAAAAGCAGCAGAT +
Preference number: 1 (lower is better)
Translates to: LVQYLLEVSANCRLL*NKVRLQEIQQKAAD
Trigger: ATCTGCTGCTTTTTGCTGGATTTCTTGAAGTCTCACCTTGTTGCACAGGAGTCTGCAATTGGCAGACACCTCAAGGAGATACTGTACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR GCA 90 bp GAGCCTGAAATACTGGTACAGTATCTCCTTGAGGTGTCTGCCAATTaGAGACTCCTGTGCAACAAGGTGAGACTTCAAGAAATCCAGCAA +
Preference number: 1 (lower is better)
Translates to: EPEILVQYLLEVSAN*RLLCNKVRLQEIQQ
Trigger: TTGCTGGATTTCTTGAAGTCTCACCTTGTTGCACAGGAGTCTGCAATTGGCAGACACCTCAAGGAGATACTGTACCAGTATTTCAGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR TCA 90 bp TTCTTCATGATTTCCACCGCGCTGGTACACGTCAAACTTCGGTCATaGGATTGGAAGGGAACCTGTCCTGACAACATTGTGTACAAAATG +
Preference number: 1 (lower is better)
Translates to: FFMISTALVHVKLRS*DWKGTCPDNIVYKM
Trigger: CATTTTGTACACAATGTTGTCAGGACAGGTTCCCTTCCAATCTCATGACCGAAGTTTGACGTGTACCAGCGCGGTGGAAATCATGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR TCA 90 bp GAAGATCCTAGAATATCCGGAGTCATCAGAGGATTGGAGGACAGCTaGCTTCCATCTTGTAGCCATTCATTGTACCTCAAGCCAGACATT +
Preference number: 1 (lower is better)
Translates to: EDPRISGVIRGLEDS*LPSCSHSLYLKPDI
Trigger: AATGTCTGGCTTGAGGTACAATGAATGGCTACAAGATGGAAGTCAGCTGTCCTCCAATCCTCTGATGACTCCGGATATTCTAGGATCTTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR TCA 90 bp TGGTTTTTACTAATAAAGCTGGGCACAGGCCAAGGCAGACATGAATaGCAGGCTTTATCTTTCATGGCTCAGTTCTCACAAGAGGCTCAC +
Preference number: 1 (lower is better)
Translates to: WFLLIKLGTGQGRHE*QALSFMAQFSQEAH
Trigger: GTGAGCCTCTTGTGAGAACTGAGCCATGAAAGATAAAGCCTGTCATTCATGTCTGCCTTGGCCTGTGCCCAGCTTTATTAGTAAAAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR CCA 90 bp CAATATGATCACTATCTATATGTAGTTTTAGTGCTCCATTTGGACTaGTCTCTGGCCACTGGATGTCAGTGTTTGGAGCAGTGGGCAGCA +
Preference number: 1 (lower is better)
Translates to: QYDHYLYVVLVLHLD*SLATGCQCLEQWAA
Trigger: TGCTGCCCACTGCTCCAAACACTGACATCCAGTGGCCAGAGACCAGTCCAAATGGAGCACTAAAACTACATATAGATAGTGATCATATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR CCA 90 bp TGGGAAAAGTATGATTCCCAAGGAGGTTCCCTTTCTCTGTTAAGCTaGAACTTTGGTGTTTCCTGTAAGAGGCAAGTTTACTTTGTCCCC +
Preference number: 1 (lower is better)
Translates to: WEKYDSQGGSLSLLS*NFGVSCKRQVYFVP
Trigger: GGGGACAAAGTAAACTTGCCTCTTACAGGAAACACCAAAGTTCCAGCTTAACAGAGAAAGGGAACCTCCTTGGGAATCATACTTTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR TCA 90 bp GGACCACATCCCAATCTCTTCTTGGGATCTTTCATCAAAAGACGCTaGATTAGGTCTTTCGCTAAAGCACTCATTTCTTGGGGATATGGA +
Preference number: 1 (lower is better)
Translates to: GPHPNLFLGSFIKRR*IRSFAKALISWGYG
Trigger: TCCATATCCCCAAGAAATGAGTGCTTTAGCGAAAGACCTAATTCAGCGTCTTTTGATGAAAGATCCCAAGAAGAGATTGGGATGTGGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
3UTR TCA 90 bp TTTTATCTTATGAATAGATCCACTTTGGTTGGTAATTCTTCTGCCTaGCAGGCTGCCTTGGGCTACTACACAGCTGATATGAGTGGACAG +
Preference number: 1 (lower is better)
Translates to: FYLMNRSTLVGNSSA*QAALGYYTADMSGQ
Trigger: CTGTCCACTCATATCAGCTGTGTAGTAGCCCAAGGCAGCCTGTCAGGCAGAAGAATTACCAACCAAAGTGGATCTATTCATAAGATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR CCA 90 bp ATTCATGAAACAGGGTGGACAACAGCCTTGTGTAGGGGAAGCATTTaGAATGGTAATCAACTACTTAATTACATAACAGGGAGCTGGGCA +
Preference number: 1 (lower is better)
Translates to: IHETGWTTALCRGSI*NGNQLLNYITGSWA
Trigger: TGCCCAGCTCCCTGTTATGTAATTAAGTAGTTGATTACCATTCCAAATGCTTCCCCTACACAAGGCTGTTGTCCACCCTGTTTCATGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR CCA 90 bp GTGGTGCGATCAAGGCTCACTGCAGCCAGCTGTTTCACTTTTAAGTaGACACACAAGAGAAATGAGTGTACGTGTCCATTAAAATATATG +
Preference number: 1 (lower is better)
Translates to: VVRSRLTAASCFTFK*THKRNECTCPLKYM
Trigger: CATATATTTTAATGGACACGTACACTCATTTCTCTTGTGTGTCCACTTAAAAGTGAAACAGCTGGCTGCAGTGAGCCTTGATCGCACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR CCA 90 bp ACAACACAGGGAAATAAATACCTAGCAGCAAGCAGTAATCCCACTTaGTTGAAGAGACAAAAGTTGGAGCTTGGGAAAGTAGCTAGGACT +
Preference number: 1 (lower is better)
Translates to: TTQGNKYLAASSNPT*LKRQKLELGKVART
Trigger: AGTCCTAGCTACTTTCCCAAGCTCCAACTTTTGTCTCTTCAACCAAGTGGGATTACTGCTTGCTGCTAGGTATTTATTTCCCTGTGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR CCA 90 bp GAAAATATTAGGCACCTACTTAATTCACAAATTCATGAAACAGGGTaGACAACAGCCTTGTGTAGGGGAAGCATTTGGAATGGTAATCAA +
Preference number: 1 (lower is better)
Translates to: ENIRHLLNSQIHETG*TTALCRGSIWNGNQ
Trigger: TTGATTACCATTCCAAATGCTTCCCCTACACAAGGCTGTTGTCCACCCTGTTTCATGAATTTGTGAATTAAGTAGGTGCCTAATATTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR CCA 90 bp AATATACTAGAGCTAAACGAAAGTAATAATAAAAGCGAGAGTTCGTaGCAAAGTTATCTTGGGGTAAATACTGCAGCAGCAAGTGCTGCT +
Preference number: 1 (lower is better)
Translates to: NILELNESNNKSESS*QSYLGVNTAAASAA
Trigger: AGCAGCACTTGCTGCTGCAGTATTTACCCCAAGATAACTTTGCCACGAACTCTCGCTTTTATTATTACTTTCGTTTAGCTCTAGTATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR GCA 90 bp AGTCCGACTCGGCAACCATTTAGTAGCCTTTCTATAAAAACAGGCTaGAAGTGCCAAAGTGACACAGATCTTATCTTAAATATTGTTATA +
Preference number: 1 (lower is better)
Translates to: SPTRQPFSSLSIKTG*KCQSDTDLILNIVI
Trigger: TATAACAATATTTAAGATAAGATCTGTGTCACTTTGGCACTTGCAGCCTGTTTTTATAGAAAGGCTACTAAATGGTTGCCGAGTCGGACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR CCA 90 bp AAAGAACATCGAAATAACTTCATATCTATAGCAACGAAGGGAACATaGAACATTAGCCCTCCTAAACAATTCCAGAAGAGGGAAGTTCAT +
Preference number: 1 (lower is better)
Translates to: KEHRNNFISIATKGT*NISPPKQFQKREVH
Trigger: ATGAACTTCCCTCTTCTGGAATTGTTTAGGAGGGCTAATGTTCCATGTTCCCTTCGTTGCTATAGATATGAAGTTATTTCGATGTTCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR TCA 90 bp TCACAAACATTTCCCAGCTCTGTCCCAATCAAGTTCTTATTTCTCTaGACGGAATTACAATTTATAAATGTAGGTCCACATGCAGATATC +
Preference number: 1 (lower is better)
Translates to: SQTFPSSVPIKFLFL*TELQFINVGPHADI
Trigger: GATATCTGCATGTGGACCTACATTTATAAATTGTAATTCCGTTCAGAGAAATAAGAACTTGATTGGGACAGAGCTGGGAAATGTTTGTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR TCA 90 bp CAACTTTCCCACAAAGAAAACTTCTCATTCAAGTGGCTTCAATGGTaGATTATTTTAAACAGGAGGAATAATATCAGGTGCAAACTCTTC +
Preference number: 1 (lower is better)
Translates to: QLSHKENFSFKWLQW*IILNRRNNIRCKLF
Trigger: GAAGAGTTTGCACCTGATATTATTCCTCCTGTTTAAAATAATTCACCATTGAAGCCACTTGAATGAGAAGTTTTCTTTGTGGGAAAGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR TCA 90 bp TCTTTCCTCTGGGATCCCGTCAGCTTCTCCTTCCCCAGAGGTCCTGACATTGCTCCTCCCGGGTTAAAGTaGTTCTCCTGCCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: SFLWDPVSFSFPRGPDIAPPGLK*FSCLSL
Trigger: GAGGCTGAGGCAGGAGAATCACTTTAACCCGGGAGG...AGCAATGTCAGGACCTCTGGGGAAGGAGAAGCTGACGGGATCCCAGAGGAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR GCA 90 bp GGTCTCCGGGTTATTGCTGTCGGCAGGATTGCTGGGCTGCAGTGTCTTGGTGGGACCACTCCAACATCATaGATGTGGCTTACAGCTGAA +
Preference number: 2 (lower is better)
Translates to: GLRVIAVGRIAGLQCLGGTTPTS*MWLTAE
Trigger: TTCAGCTGTAAGCCACATGCATGATGTTGGAGTGGT...CCCACCAAGACACTGCAGCCCAGCAATCCTGCCGACAGCAATAACCCGGAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR GCA 90 bp CGAGCTGAGCAGCTCTTAGTACTGAGGAGGGAAAGGTTGGAATTCAAGGTCACCAGGCTCCTGCTCTGTTaGCCAGGTGGGAGTACAGTG +
Preference number: 2 (lower is better)
Translates to: RAEQLLVLRRERLEFKVTRLLLC*PGGSTV
Trigger: CACTGTACTCCCACCTGGGCAACAGAGCAGGAGCCT...GGTGACCTTGAATTCCAACCTTTCCCTCCTCAGTACTAAGAGCTGCTCAGCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR CCA 90 bp GGTCTCCGGGTTATTGCTGTCGGCAGGATTGCTGGGCTGCAGTGTCTTGGTGGGCCAACATCATGCATGTaGCTTACAGCTGAAACAAGC +
Preference number: 2 (lower is better)
Translates to: GLRVIAVGRIAGLQCLGGPTSCM*LTAETS
Trigger: GCTTGTTTCAGCTGTAAGCCACATGCATGATGTTGG...CCCACCAAGACACTGCAGCCCAGCAATCCTGCCGACAGCAATAACCCGGAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR TCA 90 bp AGCTCCACAGGTCACAGGACTCATCGTAGCCGTTCTGATTCAAGAGCTCTGGGGTGCCTTGTCATGTCCTaGATCTCCCCCTCTGACAAT +
Preference number: 2 (lower is better)
Translates to: SSTGHRTHRSRSDSRALGCLVMS*ISPSDN
Trigger: ATTGTCAGAGGGGGAGATTCAGGACATGACAAGGCA...CCCCAGAGCTCTTGAATCAGAACGGCTACGATGAGTCCTGTGACCTGTGGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR TCA 90 bp GTTAAAGGCGTGGAAGGTTGCTTTCACACAGGTATGCACGGCAGCTCCGGAAGACGGCATAATGAAGGGTaGAGCATGGAGTCTTCAGGG +
Preference number: 2 (lower is better)
Translates to: VKGVEGCFHTGMHGSSGRRHNEG*SMESSG
Trigger: CCCTGAAGACTCCATGCTTCACCCTTCATTATGCCG...TCTTCCGGAGCTGCCGTGCATACCTGTGTGAAAGCAACCTTCCACGCCTTTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR TCA 90 bp CGAGCTGAGCAGCTCTTAGTACTGAGGAGGGAAAGGTTGGAATTCAAGGTCACCGGTGGGCAGATCACTTaGGGTCAGGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: RAEQLLVLRRERLEFKVTGGQIT*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAAGTGATCTGCCCACC...GGTGACCTTGAATTCCAACCTTTCCCTCCTCAGTACTAAGAGCTGCTCAGCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR GCA 90 bp TCTTTCCTCTGGGATCCCGTCAGCTTCTCCTTCCCCAGAGGTCCTGACATTGCTAATCTGTCCTCCCAGTaGAGCCTAGTTTCTATGGAG +
Preference number: 2 (lower is better)
Translates to: SFLWDPVSFSFPRGPDIANLSSQ*SLVSME
Trigger: CTCCATAGAAACTAGGCTGCACTGGGAGGACAGATT...AGCAATGTCAGGACCTCTGGGGAAGGAGAAGCTGACGGGATCCCAGAGGAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR TCA 90 bp AACTGGAAGAGGGTCTCCGGGTTATTGCTGTCGGCAGGATTGCTGGGCTGCAGTCATCTGGAAAACCTGTaGCTTACAAGCAGCTCAAAT +
Preference number: 2 (lower is better)
Translates to: NWKRVSGLLLSAGLLGCSHLENL*LTSSSN
Trigger: ATTTGAGCTGCTTGTAAGTCACAGGTTTTCCAGATG...ACTGCAGCCCAGCAATCCTGCCGACAGCAATAACCCGGAGACCCTCTTCCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648062.1
3UTR-3UTR TCA 90 bp TTAAAGGCGTGGAAGGTTGCTTTCACACAGGTATGCACGGCAGCTCCGGAAGATTGCCTTGTCATGTCCTaGATCTCCCCCTCTGACAAT +
Preference number: 2 (lower is better)
Translates to: LKAWKVAFTQVCTAAPEDCLVMS*ISPSDN
Trigger: ATTGTCAGAGGGGGAGATTCAGGACATGACAAGGCA...ATCTTCCGGAGCTGCCGTGCATACCTGTGTGAAAGCAACCTTCCACGCCTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR TCA 90 bp GTTAAAGGCGTGGAAGGTTGCTTTCACACAGGTATGCACGGCAGCTCCGGAAGAACATTGTGTACAAAATaGCGCCCAAGCTCCACAGGT +
Preference number: 2 (lower is better)
Translates to: VKGVEGCFHTGMHGSSGRTLCTK*RPSSTG
Trigger: ACCTGTGGAGCTTGGGCGTCATTTTGTACACAATGT...TCTTCCGGAGCTGCCGTGCATACCTGTGTGAAAGCAACCTTCCACGCCTTTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR TCA 90 bp AACTGGAAGAGGGTCTCCGGGTTATTGCTGTCGGCAGGATTGCTGGGCTGCAGTGAAGGGAACCTGTCCTaGCAACATTGTGTACAAAAT +
Preference number: 2 (lower is better)
Translates to: NWKRVSGLLLSAGLLGCSEGNLS*QHCVQN
Trigger: ATTTTGTACACAATGTTGTCAGGACAGGTTCCCTTC...ACTGCAGCCCAGCAATCCTGCCGACAGCAATAACCCGGAGACCCTCTTCCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR TCA 90 bp TCTTTCCTCTGGGATCCCGTCAGCTTCTCCTTCCCCAGAGGTCCTGACATTGCTAGGCCAAGGCAGACATaGATGACAGGCTTTATCTTT +
Preference number: 2 (lower is better)
Translates to: SFLWDPVSFSFPRGPDIARPRQT*MTGFIF
Trigger: AAAGATAAAGCCTGTCATTCATGTCTGCCTTGGCCT...AGCAATGTCAGGACCTCTGGGGAAGGAGAAGCTGACGGGATCCCAGAGGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR TCA 90 bp TCTTTCCTCTGGGATCCCGTCAGCTTCTCCTTCCCCAGAGGTCCTGACATTGCTGCCATTGACCTGAAATaGACTGCTTCAACGTGTTCT +
Preference number: 2 (lower is better)
Translates to: SFLWDPVSFSFPRGPDIAAIDLK*TASTCS
Trigger: AGAACACGTTGAAGCAGTTCATTTCAGGTCAATGGC...AGCAATGTCAGGACCTCTGGGGAAGGAGAAGCTGACGGGATCCCAGAGGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR GCA 90 bp AACTGGAAGAGGGTCTCCGGGTTATTGCTGTCGGCAGGATTGCTGGGCTGCAGTTTCTTTGATTTCATCTaGATCACGTGGACCACATCC +
Preference number: 2 (lower is better)
Translates to: NWKRVSGLLLSAGLLGCSFFDFI*ITWTTS
Trigger: GGATGTGGTCCACGTGATGCAGATGAAATCAAAGAA...ACTGCAGCCCAGCAATCCTGCCGACAGCAATAACCCGGAGACCCTCTTCCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR GCA 90 bp AACTGGAAGAGGGTCTCCGGGTTATTGCTGTCGGCAGGATTGCTGGGCTGCAGTAGAGTCCTTCATCATTaGACTCCTGGCAACATTTGT +
Preference number: 2 (lower is better)
Translates to: NWKRVSGLLLSAGLLGCSRVLHH*TPGNIC
Trigger: ACAAATGTTGCCAGGAGTGCAATGATGAAGGACTCT...ACTGCAGCCCAGCAATCCTGCCGACAGCAATAACCCGGAGACCCTCTTCCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR CCA 90 bp TCTTTCCTCTGGGATCCCGTCAGCTTCTCCTTCCCCAGAGGTCCTGACATTGCTGTGAGCCTGAAATACTaGTACAGTATCTCCTTGAGG +
Preference number: 2 (lower is better)
Translates to: SFLWDPVSFSFPRGPDIAVSLKY*YSISLR
Trigger: CCTCAAGGAGATACTGTACCAGTATTTCAGGCTCAC...AGCAATGTCAGGACCTCTGGGGAAGGAGAAGCTGACGGGATCCCAGAGGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR TCA 90 bp CGAGCTGAGCAGCTCTTAGTACTGAGGAGGGAAAGGTTGGAATTCAAGGTCACCAAGTGGCTGACTACATaGCACAACATGCCCCATTCT +
Preference number: 2 (lower is better)
Translates to: RAEQLLVLRRERLEFKVTKWLTT*HNMPHS
Trigger: AGAATGGGGCATGTTGTGTCATGTAGTCAGCCACTT...GGTGACCTTGAATTCCAACCTTTCCCTCCTCAGTACTAAGAGCTGCTCAGCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR GCA 90 bp GATGAATTAGCTACTGCTTATCAGGCAACTAACAGAGCCGGCAACAGAAAGGTTAGTGAGCCAAGATCGTaGCACTGCACTGCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: DELATAYQATNRAGNRKVSEPRS*HCTAAW
Trigger: CCAGGCTGCAGTGCAGTGGCACGATCTTGGCTCACT...AACCTTTCTGTTGCCGGCTCTGTTAGTTGCCTGATAAGCAGTAGCTAATTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR CCA 90 bp CCACCGCGCTGGTACACGTCAAACTTCGGTCATGAGATTGGAAGGGAACCTGTCTCTGTCAGCACCACATaGCCATTAGAATCAAGTAGA +
Preference number: 2 (lower is better)
Translates to: PPRWYTSNFGHEIGREPVSVSTT*PLESSR
Trigger: TCTACTTGATTCTAATGGCCATGTGGTGCTGACAGA...GACAGGTTCCCTTCCAATCTCATGACCGAAGTTTGACGTGTACCAGCGCGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556178.5
3UTR-3UTR TCA 90 bp TCATCATTGCACTCCTGGCAACATTTGTCACTCCAGGACGTTCAACTCCCATGTCTGAATCTCCCCCTCTaGCAATATCTGGTGCCATGT +
Preference number: 2 (lower is better)
Translates to: SSLHSWQHLSLQDVQLPCLNLPL*QYLVPC
Trigger: ACATGGCACCAGATATTGTCAGAGGGGGAGATTCAG...ACATGGGAGTTGAACGTCCTGGAGTGACAAATGTTGCCAGGAGTGCAATGATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR CCA 90 bp GATGAATTAGCTACTGCTTATCAGGCAACTAACAGAGCCGGCAACAGAAAGGTTAGCCTCCCACGTAGCTaGGATTACAGGCATGCACCA +
Preference number: 2 (lower is better)
Translates to: DELATAYQATNRAGNRKVSLPRS*DYRHAP
Trigger: TGGTGCATGCCTGTAATCCCAGCTACGTGGGAGGCT...AACCTTTCTGTTGCCGGCTCTGTTAGTTGCCTGATAAGCAGTAGCTAATTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR CAA 90 bp TCATGGCTCAGTTCTCACAAGAGGCTCACTGTACAAGGTCCAACTTaGCATCTAACTTCAACACACAGCCTTCCCAATCATCTCACAGCG +
Preference number: 2 (lower is better)
Translates to: SWLSSHKRLTVQGPT*HLTSTHSLPNHLTA
Trigger: CGCTGTGAGATGATTGGGAAGGCTGTGTGTTGAAGTTAGATGCAAAGTTGGACCTTGTACAGTGAGCCTCTTGTGAGAACTGAGCCATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR TCA 90 bp GTTAAAGGCGTGGAAGGTTGCTTTCACACAGGTATGCACGGCAGCTCCGGAAGAGCTGTTATTTCCTTTTaGGTATTGGCTTCCATCCTT +
Preference number: 2 (lower is better)
Translates to: VKGVEGCFHTGMHGSSGRAVISF*VLASIL
Trigger: AAGGATGGAAGCCAATACTCAAAAGGAAATAACAGC...TCTTCCGGAGCTGCCGTGCATACCTGTGTGAAAGCAACCTTCCACGCCTTTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR TCA 90 bp GGAACTCTCACTGGAACTGCTGCGCGTCTCGGTACTGGTGCTAGTCTTTTTCATGAAGGGAACCTGTCCTaGCAACATTGTGTACAAAAT +
Preference number: 2 (lower is better)
Translates to: GTLTGTAARLGTGASLFHEGNLS*QHCVQN
Trigger: ATTTTGTACACAATGTTGTCAGGACAGGTTCCCTTC...ATGAAAAAGACTAGCACCAGTACCGAGACGCGCAGCAGTTCCAGTGAGAGTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR TCA 90 bp TCACTATCTATATGTAGTTTTAGTGCTCCATTTGGACTGGTCTCTGGCCACTGGGGCAGGCTCATCAGTTaGCAGCTAGCCTATCTTTCC +
Preference number: 2 (lower is better)
Translates to: SLSICSFSAPFGLVSGHWGRLIS*QLAYLS
Trigger: GGAAAGATAGGCTAGCTGTCAACTGATGAGCCTGCC...CCAGTGGCCAGAGACCAGTCCAAATGGAGCACTAAAACTACATATAGATAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR TCA 90 bp CGAGCTGAGCAGCTCTTAGTACTGAGGAGGGAAAGGTTGGAATTCAAGGTCACCCTCATAAGTGGGAGTTaGACAATGAGAACACATGGA +
Preference number: 2 (lower is better)
Translates to: RAEQLLVLRRERLEFKVTLISGS*TMRTHG
Trigger: TCCATGTGTTCTCATTGTTCAACTCCCACTTATGAG...GGTGACCTTGAATTCCAACCTTTCCCTCCTCAGTACTAAGAGCTGCTCAGCTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR GCA 90 bp TCACTATCTATATGTAGTTTTAGTGCTCCATTTGGACTGGTCTCTGGCCACTGGCTGAGGTACAAGGATTaGTTGAGCCCAGGAGGTGGA +
Preference number: 2 (lower is better)
Translates to: SLSICSFSAPFGLVSGHWLRYKD*LSPGGG
Trigger: TCCACCTCCTGGGCTCAAGCAATCCTTGTACCTCAG...CCAGTGGCCAGAGACCAGTCCAAATGGAGCACTAAAACTACATATAGATAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR CCA 90 bp GAGGATTGGAGGACAGCTGACTTCCATCTTGTAGCCATTCATTGTACCTCAAGCTTCAGTAGTTCCATGTaGATGGGGGAGGTCTCACAA +
Preference number: 2 (lower is better)
Translates to: EDWRTADFHLVAIHCTSSFSSSM*MGEVSQ
Trigger: TTGTGAGACCTCCCCCATCCACATGGAACTACTGAA...GCTTGAGGTACAATGAATGGCTACAAGATGGAAGTCAGCTGTCCTCCAATCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648062.1
3UTR CAA 90 bp GTTGATAGAATGGAGAGTCCTTCATCATTGCACTCCTGGCAACATTaGTCACTCCAGGACGTTCAACTCCCATGTGAAACTGAAGAGGGT +
Preference number: 2 (lower is better)
Translates to: VDRMESPSSLHSWQH*SLQDVQLPCETEEG
Trigger: ACCCTCTTCAGTTTCACATGGGAGTTGAACGTCCTGGAGTGACAAATGTTGCCAGGAGTGCAATGATGAAGGACTCTCCATTCTATCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR CAA 90 bp CAAGGCCACCTTCGCAACCAGCCCTTTGAAACTGGAAACAAAGTTTaGGCCAGAGATGAACACGCACCCATATGTCTGAAGACAAAAGTT +
Preference number: 2 (lower is better)
Translates to: QGHLRNQPFETGNKV*ARDEHAPICLKTKV
Trigger: AACTTTTGTCTTCAGACATATGGGTGCGTGTTCATCTCTGGCCAAAACTTTGTTTCCAGTTTCAAAGGGCTGGTTGCGAAGGTGGCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR TCA 90 bp GAGCAACAAAGGAATAGCCCTGAAACAGCTTCTCAGAACTCTGGGGCAGGGCTGTTCATCAAAAGACGCTaGATTAGGTCTTTCGCTAAA +
Preference number: 2 (lower is better)
Translates to: EQQRNSPETASQNSGAGLFIKRR*IRSFAK
Trigger: TTTAGCGAAAGACCTAATTCAGCGTCTTTTGATGAA...CAGCCCTGCCCCAGAGTTCTGAGAAGCTGTTTCAGGGCTATTCCTTTGTTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR TCA 90 bp CGAGCTGAGCAGCTCTTAGTACTGAGGAGGGAAAGGTTGGAATTCAAGGTCACCTTCTTCCTGTTAGTCTaGCTGCCTTTTTACCCATTT +
Preference number: 2 (lower is better)
Translates to: RAEQLLVLRRERLEFKVTFFLLV*LPFYPF
Trigger: AAATGGGTAAAAAGGCAGTCAGACTAACAGGAAGAA...GGTGACCTTGAATTCCAACCTTTCCCTCCTCAGTACTAAGAGCTGCTCAGCTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR GCA 90 bp TCATCATTGCACTCCTGGCAACATTTGTCACTCCAGGACGTTCAACTCCCATGTACACATAGCTTAGCATaGATCTCAGATGGATCCCGA +
Preference number: 2 (lower is better)
Translates to: SSLHSWQHLSLQDVQLPCTHSLA*ISDGSR
Trigger: TCGGGATCCATCTGAGATGCATGCTAAGCTATGTGT...ACATGGGAGTTGAACGTCCTGGAGTGACAAATGTTGCCAGGAGTGCAATGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648062.1
3UTR-3UTR GCA 90 bp CGAGCTGAGCAGCTCTTAGTACTGAGGAGGGAAAGGTTGGAATTCAAGGTCACCTGCATAGGACCTAACTaGTTCAAACTTGGCATCAAA +
Preference number: 2 (lower is better)
Translates to: RAEQLLVLRRERLEFKVTCIGPN*FKLGIK
Trigger: TTTGATGCCAAGTTTGAAGCAGTTAGGTCCTATGCA...GGTGACCTTGAATTCCAACCTTTCCCTCCTCAGTACTAAGAGCTGCTCAGCTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR GCA 90 bp TCTTTCCTCTGGGATCCCGTCAGCTTCTCCTTCCCCAGAGGTCCTGACATTGCTACATTTACAATGTCTTaGAACCATTACCACTACCTA +
Preference number: 2 (lower is better)
Translates to: SFLWDPVSFSFPRGPDIATFTMS*NHYHYL
Trigger: TAGGTAGTGGTAATGGTTGCAAGACATTGTAAATGT...AGCAATGTCAGGACCTCTGGGGAAGGAGAAGCTGACGGGATCCCAGAGGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR CCA 90 bp TCATCATTGCACTCCTGGCAACATTTGTCACTCCAGGACGTTCAACTCCCATGTTTCATCTGCATCACGTaGACCACATCCCAATCTCTT +
Preference number: 2 (lower is better)
Translates to: SSLHSWQHLSLQDVQLPCFICIT*TTSQSL
Trigger: AAGAGATTGGGATGTGGTCCACGTGATGCAGATGAA...ACATGGGAGTTGAACGTCCTGGAGTGACAAATGTTGCCAGGAGTGCAATGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR CCA 90 bp GATGAATTAGCTACTGCTTATCAGGCAACTAACAGAGCCGGCAACAGAAAGGTTGTAATCCCAGCTACCTaGGAGGCTGAGACACAAGAA +
Preference number: 2 (lower is better)
Translates to: DELATAYQATNRAGNRKVVIPAT*EAETQE
Trigger: TTCTTGTGTCTCAGCCTCCCAGGTAGCTGGGATTAC...AACCTTTCTGTTGCCGGCTCTGTTAGTTGCCTGATAAGCAGTAGCTAATTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR TCA 90 bp GAGGATTGGAGGACAGCTGACTTCCATCTTGTAGCCATTCATTGTACCTCAAGCTCTGTCCAGTGCTTTTaGATGAGGATAACCAAACAG +
Preference number: 2 (lower is better)
Translates to: EDWRTADFHLVAIHCTSSSVQCF*MRITKQ
Trigger: CTGTTTGGTTATCCTCATTCAAAAGCACTGGACAGA...GCTTGAGGTACAATGAATGGCTACAAGATGGAAGTCAGCTGTCCTCCAATCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648062.1
3UTR-3UTR TCA 90 bp CAGGGCTGCGGGAGAATAAGTGGGATCCATTTCTGTGAACTCTTCTGCAAAGTTTTTCTCCATCAACAGTaGAAGGAGATGCTCCAGTTA +
Preference number: 2 (lower is better)
Translates to: QGCGRISGIHFCELFCKVFLHQQ*KEMLQL
Trigger: TAACTGGAGCATCTCCTTTCACTGTTGATGGAGAAA...AACTTTGCAGAAGAGTTCACAGAAATGGATCCCACTTATTCTCCCGCAGCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR GCA 90 bp GGGCAGGGCTGCGGGAGAATAAGTGGGATCCATTTCTGTGAACTCTTCTGCAAATCTGACAATATCTGGTaGCATGTATTCAATAGTTCC +
Preference number: 2 (lower is better)
Translates to: GQGCGRISGIHFCELFCKSDNIW*HVFNSS
Trigger: GGAACTATTGAATACATGGCACCAGATATTGTCAGA...TTTGCAGAAGAGTTCACAGAAATGGATCCCACTTATTCTCCCGCAGCCCTGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR GCA 90 bp CAGGGCTGCGGGAGAATAAGTGGGATCCATTTCTGTGAACTCTTCTGCAAAGTTTTCTTTGATTTCATCTaGATCACGTGGACCACATCC +
Preference number: 2 (lower is better)
Translates to: QGCGRISGIHFCELFCKVFFDFI*ITWTTS
Trigger: GGATGTGGTCCACGTGATGCAGATGAAATCAAAGAA...AACTTTGCAGAAGAGTTCACAGAAATGGATCCCACTTATTCTCCCGCAGCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR GCA 90 bp GAGGATTGGAGGACAGCTGACTTCCATCTTGTAGCCATTCATTGTACCTCAAGCAGAGTCCTTCATCATTaGACTCCTGGCAACATTTGT +
Preference number: 2 (lower is better)
Translates to: EDWRTADFHLVAIHCTSSRVLHH*TPGNIC
Trigger: ACAAATGTTGCCAGGAGTGCAATGATGAAGGACTCT...GCTTGAGGTACAATGAATGGCTACAAGATGGAAGTCAGCTGTCCTCCAATCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR GCA 90 bp CGAGCTGAGCAGCTCTTAGTACTGAGGAGGGAAAGGTTGGAATTCAAGGTCACCAAATACGAGAAAAAGTaGATGTACGGAGTATGGGAT +
Preference number: 2 (lower is better)
Translates to: RAEQLLVLRRERLEFKVTKYEKK*MYGVWD
Trigger: ATCCCATACTCCGTACATGCACTTTTTCTCGTATTT...GGTGACCTTGAATTCCAACCTTTCCCTCCTCAGTACTAAGAGCTGCTCAGCTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR GCA 90 bp GATGAATTAGCTACTGCTTATCAGGCAACTAACAGAGCCGGCAACAGAAAGGTTATACCAAGCCACAGGTaGTCAAGATGGCGAATCTGT +
Preference number: 2 (lower is better)
Translates to: DELATAYQATNRAGNRKVIPSHR*SRWRIC
Trigger: ACAGATTCGCCATCTTGAGCACCTGTGGCTTGGTAT...AACCTTTCTGTTGCCGGCTCTGTTAGTTGCCTGATAAGCAGTAGCTAATTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR CCA 90 bp TATTTGTTAAAGGCGTGGAAGGTTGCTTTCACACAGGTATGCACGGCAGCTCCGCCCTCTGACAATATCTaGTGCCATGTATTCAATAGT +
Preference number: 2 (lower is better)
Translates to: YLLKAWKVAFTQVCTAAPPSDNI*CHVFNS
Trigger: ACTATTGAATACATGGCACCAGATATTGTCAGAGGG...CGGAGCTGCCGTGCATACCTGTGTGAAAGCAACCTTCCACGCCTTTAACAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR CCA 90 bp CAGGGCTGCGGGAGAATAAGTGGGATCCATTTCTGTGAACTCTTCTGCAAAGTTAAAGCACTCATTTCTTaGGGATATGGAGGCTCACTT +
Preference number: 2 (lower is better)
Translates to: QGCGRISGIHFCELFCKVKALIS*GYGGSL
Trigger: AAGTGAGCCTCCATATCCCCAAGAAATGAGTGCTTT...AACTTTGCAGAAGAGTTCACAGAAATGGATCCCACTTATTCTCCCGCAGCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
3UTR CAA 90 bp GTCTTTTCAAAAGCCCATTTGAGATTATTCAGGCAGGCTCATCAGTaGACAGCTAGCCTATCTTTCCTTCTTCCTGTTAGTCTGACTGCC +
Preference number: 2 (lower is better)
Translates to: VFSKAHLRLFRQAHQ*TASLSFLLPVSLTA
Trigger: GGCAGTCAGACTAACAGGAAGAAGGAAAGATAGGCTAGCTGTCAACTGATGAGCCTGCCTGAATAATCTCAAATGGGCTTTTGAAAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR TCA 90 bp CAAGCCAGACATTTTAAGCCTTTTGTTTGGATCTACTGTGAGAAGTCCTTGGATGCCTCAGGCATATGCTaGGGGAATAAAGGTGCAATG +
Preference number: 2 (lower is better)
Translates to: QARHFKPFVWIYCEKSLDASGIC*GNKGAM
Trigger: CATTGCACCTTTATTCCCTCAGCATATGCCTGAGGC...ATCCAAGGACTTCTCACAGTAGATCCAAACAAAAGGCTTAAAATGTCTGGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648062.1
3UTR-3UTR TCA 90 bp GATGAATTAGCTACTGCTTATCAGGCAACTAACAGAGCCGGCAACAGAAAGGTTAAACATACAGCACTTTaGCATCTGTCCGAGCACTAC +
Preference number: 2 (lower is better)
Translates to: DELATAYQATNRAGNRKVKHTAL*HLSEHY
Trigger: GTAGTGCTCGGACAGATGTCAAAGTGCTGTATGTTT...AACCTTTCTGTTGCCGGCTCTGTTAGTTGCCTGATAAGCAGTAGCTAATTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR GCA 90 bp TCACTATCTATATGTAGTTTTAGTGCTCCATTTGGACTGGTCTCTGGCCACTGGTATCCCAGTTTCCTGTaGTCTGAAGAACAGCTGCTA +
Preference number: 2 (lower is better)
Translates to: SLSICSFSAPFGLVSGHWYPSFL*SEEQLL
Trigger: TAGCAGCTGTTCTTCAGAGCACAGGAAACTGGGATA...CCAGTGGCCAGAGACCAGTCCAAATGGAGCACTAAAACTACATATAGATAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR CCA 90 bp AGGACAGCTGACTTCCATCTTGTAGCCATTCATTGTACCTCAAGCCAGACATTTCCAACATCATGCATGTaGCTTACAGCTGAAACAAGC +
Preference number: 2 (lower is better)
Translates to: RTADFHLVAIHCTSSQTFPTSCM*LTAETS
Trigger: GCTTGTTTCAGCTGTAAGCCACATGCATGATGTTGG...AAATGTCTGGCTTGAGGTACAATGAATGGCTACAAGATGGAAGTCAGCTGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR CCA 90 bp TATTTGTTAAAGGCGTGGAAGGTTGCTTTCACACAGGTATGCACGGCAGCTCCGTTTAAGCCTTTTGTTTaGATCTACTGTGAGAAGTCC +
Preference number: 2 (lower is better)
Translates to: YLLKAWKVAFTQVCTAAPFKPFV*IYCEKS
Trigger: GGACTTCTCACAGTAGATCCAAACAAAAGGCTTAAA...CGGAGCTGCCGTGCATACCTGTGTGAAAGCAACCTTCCACGCCTTTAACAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR TCA 90 bp AGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATCTGGAAAGCCTCAGGCATATGCTaGGGGAATAAAGGTGCAATG +
Preference number: 2 (lower is better)
Translates to: SKRYHHSMSHFLLADIWKASGIC*GNKGAM
Trigger: CATTGCACCTTTATTCCCTCAGCATATGCCTGAGGC...TTTCCAGATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
3UTR-3UTR TCA 90 bp CAGGGCTGCGGGAGAATAAGTGGGATCCATTTCTGTGAACTCTTCTGCAAAGTTTTCATCAAAAGACGCTaGATTAGGTCTTTCGCTAAA +
Preference number: 2 (lower is better)
Translates to: QGCGRISGIHFCELFCKVFIKRR*IRSFAK
Trigger: TTTAGCGAAAGACCTAATTCAGCGTCTTTTGATGAA...AACTTTGCAGAAGAGTTCACAGAAATGGATCCCACTTATTCTCCCGCAGCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR TCA 90 bp TCACTATCTATATGTAGTTTTAGTGCTCCATTTGGACTGGTCTCTGGCCACTGGGAAATGGGGGCAAGGTaGATAAGTATCCAGTCAATT +
Preference number: 2 (lower is better)
Translates to: SLSICSFSAPFGLVSGHWEMGAR*ISIQSI
Trigger: AATTGACTGGATACTTATTCACCTTGCCCCCATTTC...CCAGTGGCCAGAGACCAGTCCAAATGGAGCACTAAAACTACATATAGATAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR CAA 90 bp GACAAGAGTGCAACAGTGTTTGTTAAGGTCTTTTCAAAAGCCCATTaGAGATTATTCAGGCAGGCTCATCAGTTGACAGCTAGCCTATCT +
Preference number: 2 (lower is better)
Translates to: DKSATVFVKVFSKAH*RLFRQAHQLTASLS
Trigger: AGATAGGCTAGCTGTCAACTGATGAGCCTGCCTGAATAATCTCAAATGGGCTTTTGAAAAGACCTTAACAAACACTGTTGCACTCTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR TCA 90 bp TTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCGCCTCAGGCATATGCTaGGGGAATAAAGGTGCAATG +
Preference number: 2 (lower is better)
Translates to: LLKRVICALFTVTFSVQCASGIC*GNKGAM
Trigger: CATTGCACCTTTATTCCCTCAGCATATGCCTGAGGC...GCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTTAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
3UTR-3UTR TCA 90 bp AAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATGGAGGCAGATTCCAATaGGACCAACGGGAAACATTT +
Preference number: 2 (lower is better)
Translates to: KAKQKVSSQYESFLVGRHGGRFQ*DQRETF
Trigger: AAATGTTTCCCGTTGGTCTCATTGGAATCTGCCTCC...ATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
3UTR-3UTR TCA 90 bp TCAACAGTGAAAGGAGATGCTCCAGTTAGTAATTCATACATTAGAACACCCAAACTGAATCTCCCCCTCTaGCAATATCTGGTGCCATGT +
Preference number: 2 (lower is better)
Translates to: STVKGDAPVSNSYIRTPKLNLPL*QYLVPC
Trigger: ACATGGCACCAGATATTGTCAGAGGGGGAGATTCAG...TTTGGGTGTTCTAATGTATGAATTACTAACTGGAGCATCTCCTTTCACTGTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR TCA 90 bp AGATGTTCTTTGATTTCATCTGCATCACGTGGACCACATCCCAATCTCTTCTTGTTTCTCCATCAACAGTaGAAGGAGATGCTCCAGTTA +
Preference number: 2 (lower is better)
Translates to: RCSLISSASRGPHPNLFLFLHQQ*KEMLQL
Trigger: TAACTGGAGCATCTCCTTTCACTGTTGATGGAGAAA...CAAGAAGAGATTGGGATGTGGTCCACGTGATGCAGATGAAATCAAAGAACATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR TCA 90 bp AGGACAGCTGACTTCCATCTTGTAGCCATTCATTGTACCTCAAGCCAGACATTTACACTTTCGACAAATTaGAAAACTACCTTCTCCCAG +
Preference number: 2 (lower is better)
Translates to: RTADFHLVAIHCTSSQTFTLSTN*KTTFSQ
Trigger: CTGGGAGAAGGTAGTTTTTCAATTTGTCGAAAGTGT...AAATGTCTGGCTTGAGGTACAATGAATGGCTACAAGATGGAAGTCAGCTGTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR GCA 90 bp TTGATCCTTGATGTGAGAATAACTGTATTCCTTGCATGTTCAGAATGTCCTTATGAGGTCTCTCTATGTTaGCCAGGCTGGTCTCCAACT +
Preference number: 2 (lower is better)
Translates to: LILDVRITVFLACSECPYEVSLC*PGWSPT
Trigger: AGTTGGAGACCAGCCTGGGCAACATAGAGAGACCTC...ATAAGGACATTCTGAACATGCAAGGAATACAGTTATTCTCACATCAAGGATCAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR CAA 90 bp TTTAAACAATATGATCACTATCTATATGTAGTTTTAGTGCTCCATTaGGACTGGTCTCTGGCCACTGGATGTCAGTGTTTGGAGCAGTGG +
Preference number: 2 (lower is better)
Translates to: FKQYDHYLYVVLVLH*DWSLATGCQCLEQW
Trigger: CCACTGCTCCAAACACTGACATCCAGTGGCCAGAGACCAGTCCAAATGGAGCACTAAAACTACATATAGATAGTGATCATATTGTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR TCA 90 bp TCACTATCTATATGTAGTTTTAGTGCTCCATTTGGACTGGTCTCTGGCCACTGGTGTCCATACGGGCACTaGAATAACATTTTTGTAAAG +
Preference number: 2 (lower is better)
Translates to: SLSICSFSAPFGLVSGHWCPYGH*NNIFVK
Trigger: CTTTACAAAAATGTTATTTCAGTGCCCGTATGGACA...CCAGTGGCCAGAGACCAGTCCAAATGGAGCACTAAAACTACATATAGATAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR CCA 90 bp ATGCAACTTCACAATATTGGGGTGTCCTTCACAGAGTTTCAGAGCTGTTATTTCAGCATGCATCTCAGATaGATCCCGAATACAGAGTAT +
Preference number: 2 (lower is better)
Translates to: MQLHNIGVSFTEFQSCYFSMHLR*IPNTEY
Trigger: ATACTCTGTATTCGGGATCCATCTGAGATGCATGCT...GAAATAACAGCTCTGAAACTCTGTGAAGGACACCCCAATATTGTGAAGTTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648062.1
3UTR CAA 90 bp TCTTGTAGCCATTCATTGTACCTCAAGCCAGACATTTTAAGCCTTTaGTTTGGATCTACTGTGAGAAGTCCTTGGATCAAATCTTTAGCC +
Preference number: 2 (lower is better)
Translates to: SCSHSLYLKPDILSL*FGSTVRSPWIKSLA
Trigger: GGCTAAAGATTTGATCCAAGGACTTCTCACAGTAGATCCAAACAAAAGGCTTAAAATGTCTGGCTTGAGGTACAATGAATGGCTACAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR TCA 90 bp TTGATCCTTGATGTGAGAATAACTGTATTCCTTGCATGTTCAGAATGTCCTTATGGAGGCAGATTCCAATaGGACCAACGGGAAACATTT +
Preference number: 2 (lower is better)
Translates to: LILDVRITVFLACSECPYGGRFQ*DQRETF
Trigger: AAATGTTTCCCGTTGGTCTCATTGGAATCTGCCTCC...ATAAGGACATTCTGAACATGCAAGGAATACAGTTATTCTCACATCAAGGATCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR TCA 90 bp TTGTTTGAAGGGTGCAAATTTCAAAAACCCACATTGTCCACAAGGCAAAGCAAATCTGTCCAGTGCTTTTaGATGAGGATAACCAAACAG +
Preference number: 2 (lower is better)
Translates to: LFEGCKFQKPTLSTRQSKSVQCF*MRITKQ
Trigger: CTGTTTGGTTATCCTCATTCAAAAGCACTGGACAGA...TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAATTTGCACCCTTCAAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
3UTR-3UTR TCA 90 bp CAATATTGGGGTGTCCTTCACAGAGTTTCAGAGCTGTTATTTCCTTTTGAGTATTTTCTCCATCAACAGTaGAAGGAGATGCTCCAGTTA +
Preference number: 2 (lower is better)
Translates to: QYWGVLHRVSELLFPFEYFLHQQ*KEMLQL
Trigger: TAACTGGAGCATCTCCTTTCACTGTTGATGGAGAAA...ATACTCAAAAGGAAATAACAGCTCTGAAACTCTGTGAAGGACACCCCAATATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR GCA 90 bp AAGAGATGTTCTTTGATTTCATCTGCATCACGTGGACCACATCCCAATCTCTTCTCCACAAAAGGAATATaGTCTTTCAGTTTCATCAGC +
Preference number: 2 (lower is better)
Translates to: KRCSLISSASRGPHPNLFSTKGI*SFSFIS
Trigger: GCTGATGAAACTGAAAGAGCATATTCCTTTTGTGGA...GAAGAGATTGGGATGTGGTCCACGTGATGCAGATGAAATCAAAGAACATCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556178.5
3UTR-3UTR GCA 90 bp ATTGGGGTGTCCTTCACAGAGTTTCAGAGCTGTTATTTCCTTTTGAGTATTGGCTCTGACAATATCTGGTaGCATGTATTCAATAGTTCC +
Preference number: 2 (lower is better)
Translates to: IGVSFTEFQSCYFLLSIGSDNIW*HVFNSS
Trigger: GGAACTATTGAATACATGGCACCAGATATTGTCAGA...GCCAATACTCAAAAGGAAATAACAGCTCTGAAACTCTGTGAAGGACACCCCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR CCA 90 bp TCAAAAGACGCTGAATTAGGTCTTTCGCTAAAGCACTCATTTCTTGGGGATATGGGAATAAAGGTGCAATaGATCACTGATACACTCCTA +
Preference number: 2 (lower is better)
Translates to: SKDAELGLSLKHSFLGDMGIKVQ*ITDTLL
Trigger: TAGGAGTGTATCAGTGATCCATTGCACCTTTATTCC...CATATCCCCAAGAAATGAGTGCTTTAGCGAAAGACCTAATTCAGCGTCTTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648062.1
3UTR-3UTR CCA 90 bp TCAAAAGACGCTGAATTAGGTCTTTCGCTAAAGCACTCATTTCTTGGGGATATGCCCTCTGACAATATCTaGTGCCATGTATTCAATAGT +
Preference number: 2 (lower is better)
Translates to: SKDAELGLSLKHSFLGDMPSDNI*CHVFNS
Trigger: ACTATTGAATACATGGCACCAGATATTGTCAGAGGG...CATATCCCCAAGAAATGAGTGCTTTAGCGAAAGACCTAATTCAGCGTCTTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR CCA 90 bp GATGAATTAGCTACTGCTTATCAGGCAACTAACAGAGCCGGCAACAGAAAGGTTTGTTTCACTTTTAAGTaGACACACAAGAGAAATGAG +
Preference number: 2 (lower is better)
Translates to: DELATAYQATNRAGNRKVCFTFK*THKRNE
Trigger: CTCATTTCTCTTGTGTGTCCACTTAAAAGTGAAACA...AACCTTTCTGTTGCCGGCTCTGTTAGTTGCCTGATAAGCAGTAGCTAATTCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR CCA 90 bp TTGATCCTTGATGTGAGAATAACTGTATTCCTTGCATGTTCAGAATGTCCTTATGCAACTTCTGCTTCCTaGACTCAAGTGATTCTCCCA +
Preference number: 2 (lower is better)
Translates to: LILDVRITVFLACSECPYATSAS*TQVILP
Trigger: TGGGAGAATCACTTGAGTCCAGGAAGCAGAAGTTGC...ATAAGGACATTCTGAACATGCAAGGAATACAGTTATTCTCACATCAAGGATCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR CCA 90 bp TTGATCCTTGATGTGAGAATAACTGTATTCCTTGCATGTTCAGAATGTCCTTATTTCTTACCTGGCAGCTaGCACCACATTAGAATCTCC +
Preference number: 2 (lower is better)
Translates to: LILDVRITVFLACSECPYFLPGS*HHIRIS
Trigger: GGAGATTCTAATGTGGTGCCAGCTGCCAGGTAAGAA...ATAAGGACATTCTGAACATGCAAGGAATACAGTTATTCTCACATCAAGGATCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR CAA 90 bp CAGCCTAGTTTCTATGGAGCTACCATATATGACAGTGTCCTATTATaGCTGCCTTTTGATCACATGAACATGGATCATAATCAGAAGTAC +
Preference number: 2 (lower is better)
Translates to: QPSFYGATIYDSVLL*LPFDHMNMDHNQKY
Trigger: GTACTTCTGATTATGATCCATGTTCATGTGATCAAAAGGCAGCAATAATAGGACACTGTCATATATGGTAGCTCCATAGAAACTAGGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR GCA 90 bp TTGATCCTTGATGTGAGAATAACTGTATTCCTTGCATGTTCAGAATGTCCTTATACACATAGCTTAGCATaGATCTCAGATGGATCCCGA +
Preference number: 2 (lower is better)
Translates to: LILDVRITVFLACSECPYTHSLA*ISDGSR
Trigger: TCGGGATCCATCTGAGATGCATGCTAAGCTATGTGT...ATAAGGACATTCTGAACATGCAAGGAATACAGTTATTCTCACATCAAGGATCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR GCA 90 bp TTGATCCTTGATGTGAGAATAACTGTATTCCTTGCATGTTCAGAATGTCCTTATGTTCACTGCAACTTCTaGTTCCTGGACTCAAGTGAT +
Preference number: 2 (lower is better)
Translates to: LILDVRITVFLACSECPYVHCNF*FLDSSD
Trigger: ATCACTTGAGTCCAGGAAGCAGAAGTTGCAGTGAAC...ATAAGGACATTCTGAACATGCAAGGAATACAGTTATTCTCACATCAAGGATCAA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR CCA 90 bp TTGATCCTTGATGTGAGAATAACTGTATTCCTTGCATGTTCAGAATGTCCTTATGTGGCAAAGTTATCTTaGGGTAAATACTGCAGCAGC +
Preference number: 2 (lower is better)
Translates to: LILDVRITVFLACSECPYVAKLS*GKYCSS
Trigger: GCTGCTGCAGTATTTACCCCAAGATAACTTTGCCAC...ATAAGGACATTCTGAACATGCAAGGAATACAGTTATTCTCACATCAAGGATCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR TCA 90 bp GAAAACAGACCCCTTTCTCTGATAAATCATTGTTTGAAGGGTGCAAATTTCAAACATCTGGAAAACCTGTaGCTTACAAGCAGCTCAAAT +
Preference number: 2 (lower is better)
Translates to: ENRPLSLINHCLKGANFKHLENL*LTSSSN
Trigger: ATTTGAGCTGCTTGTAAGTCACAGGTTTTCCAGATG...TTTGAAATTTGCACCCTTCAAACAATGATTTATCAGAGAAAGGGGTCTGTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
3UTR-3UTR TCA 90 bp TTGTTTGAAGGGTGCAAATTTCAAAAACCCACATTGTCCACAAGGCAAAGCAAATTCATCAAAAGACGCTaGATTAGGTCTTTCGCTAAA +
Preference number: 2 (lower is better)
Translates to: LFEGCKFQKPTLSTRQSKFIKRR*IRSFAK
Trigger: TTTAGCGAAAGACCTAATTCAGCGTCTTTTGATGAA...TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAATTTGCACCCTTCAAACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648062.1
3UTR-3UTR TCA 90 bp TTGATCCTTGATGTGAGAATAACTGTATTCCTTGCATGTTCAGAATGTCCTTATAGTGCACATTTCACATaGCCAGCCTCTTATGTAGTT +
Preference number: 2 (lower is better)
Translates to: LILDVRITVFLACSECPYSAHFT*PASYVV
Trigger: AACTACATAAGAGGCTGGTCATGTGAAATGTGCACT...ATAAGGACATTCTGAACATGCAAGGAATACAGTTATTCTCACATCAAGGATCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR GCA 90 bp TTGATCCTTGATGTGAGAATAACTGTATTCCTTGCATGTTCAGAATGTCCTTATAATTGCAGACTCCTGTaGAACAAGGTGAGACTTCAA +
Preference number: 2 (lower is better)
Translates to: LILDVRITVFLACSECPYNCRLL*NKVRLQ
Trigger: TTGAAGTCTCACCTTGTTGCACAGGAGTCTGCAATT...ATAAGGACATTCTGAACATGCAAGGAATACAGTTATTCTCACATCAAGGATCAA
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR CCA 90 bp TGTTGGCATCATGCTAGGTTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAGGAATAAAGGTGCAATaGATCACTGATACACTCCTA +
Preference number: 2 (lower is better)
Translates to: CWHHARLLKRVICALFTVGIKVQ*ITDTLL
Trigger: TAGGAGTGTATCAGTGATCCATTGCACCTTTATTCC...TACTGTGAATAGAGCACATATTACTCTTTTTAGCAACCTAGCATGATGCCAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
3UTR-3UTR CCA 90 bp TGTTGGCATCATGCTAGGTTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTATTGTTGGCAGACATCTaGAAAACCTGTGACTTACAA +
Preference number: 2 (lower is better)
Translates to: CWHHARLLKRVICALFTVLLADI*KTCDLQ
Trigger: TTGTAAGTCACAGGTTTTCCAGATGTCTGCCAACAA...TACTGTGAATAGAGCACATATTACTCTTTTTAGCAACCTAGCATGATGCCAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
3UTR-3UTR CCA 90 bp TCAACAGTGAAAGGAGATGCTCCAGTTAGTAATTCATACATTAGAACACCCAAACCCTCTGACAATATCTaGTGCCATGTATTCAATAGT +
Preference number: 2 (lower is better)
Translates to: STVKGDAPVSNSYIRTPKPSDNI*CHVFNS
Trigger: ACTATTGAATACATGGCACCAGATATTGTCAGAGGG...TTTGGGTGTTCTAATGTATGAATTACTAACTGGAGCATCTCCTTTCACTGTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR CCA 90 bp TGTCCTTCAAATCTAGGTCATAGTGTTGATAGAATGGAGAGTCCTTCATCATTGATAGTGTTGATAGAATaGAGAGTCCTTCATCATTGC +
Preference number: 2 (lower is better)
Translates to: CPSNLGHSVDRMESPSSLIVLIE*RVLHHC
Trigger: GCAATGATGAAGGACTCTCCATTCTATCAACACTAT...CAATGATGAAGGACTCTCCATTCTATCAACACTATGACCTAGATTTGAAGGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR CCA 90 bp AAACATTTCCTATTTTGCACTAGGGTGAAGAAACCAAGACACAAACATTTGGAATTGGTCTCTAACTCCTaGTTTCAAGTGATTCTCCAG +
Preference number: 2 (lower is better)
Translates to: KHFLFCTRVKKPRHKHLELVSNS*FQVILQ
Trigger: CTGGAGAATCACTTGAAACCAGGAGTTAGAGACCAA...TTCCAAATGTTTGTGTCTTGGTTTCTTCACCCTAGTGCAAAATAGGAAATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR CAA 90 bp TCTGATAAATCATTGTTTGAAGGGTGCAAATTTCAAAAACCCACATaGTCCACAAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCAT +
Preference number: 2 (lower is better)
Translates to: SDKSLFEGCKFQKPT*STRQSKRYHHSMSH
Trigger: ATGACTCATACTGTGATGATACCTTTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAATTTGCACCCTTCAAACAATGATTTATCAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
3UTR CAA 90 bp TGCAAGTGCCAAAGTGACACAGATCTTATCTTAAATATTGTTATATaGCTTGTGTCTAGAGTAATACCTGGCCTGAAAGAAGTGCTCAAA +
Preference number: 2 (lower is better)
Translates to: CKCQSDTDLILNIVI*LVSRVIPGLKEVLK
Trigger: TTTGAGCACTTCTTTCAGGCCAGGTATTACTCTAGACACAAGCAATATAACAATATTTAAGATAAGATCTGTGTCACTTTGGCACTTGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR GCA 90 bp TTGTTTGAAGGGTGCAAATTTCAAAAACCCACATTGTCCACAAGGCAAAGCAAAATTACTAGAGATCTGTaGCTGATGGAATCACATTTT +
Preference number: 2 (lower is better)
Translates to: LFEGCKFQKPTLSTRQSKITRDL*LMESHF
Trigger: AAAATGTGATTCCATCAGGCACAGATCTCTAGTAAT...TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAATTTGCACCCTTCAAACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR CCA 90 bp GAAAACAGACCCCTTTCTCTGATAAATCATTGTTTGAAGGGTGCAAATTTCAAAGGAATAAAGGTGCAATaGATCACTGATACACTCCTA +
Preference number: 2 (lower is better)
Translates to: ENRPLSLINHCLKGANFKGIKVQ*ITDTLL
Trigger: TAGGAGTGTATCAGTGATCCATTGCACCTTTATTCC...TTTGAAATTTGCACCCTTCAAACAATGATTTATCAGAGAAAGGGGTCTGTTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
3UTR-3UTR CCA 90 bp TTGATCCTTGATGTGAGAATAACTGTATTCCTTGCATGTTCAGAATGTCCTTATTTGTTGGCAGACATCTaGAAAACCTGTGACTTACAA +
Preference number: 2 (lower is better)
Translates to: LILDVRITVFLACSECPYLLADI*KTCDLQ
Trigger: TTGTAAGTCACAGGTTTTCCAGATGTCTGCCAACAA...ATAAGGACATTCTGAACATGCAAGGAATACAGTTATTCTCACATCAAGGATCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR CCA 90 bp TTGATCCTTGATGTGAGAATAACTGTATTCCTTGCATGTTCAGAATGTCCTTATCCCGAATACAGAGTATaGGACCTTGAGTTCTTATAT +
Preference number: 2 (lower is better)
Translates to: LILDVRITVFLACSECPYPEYRV*DLEFLY
Trigger: ATATAAGAACTCAAGGTCCCATACTCTGTATTCGGG...ATAAGGACATTCTGAACATGCAAGGAATACAGTTATTCTCACATCAAGGATCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR GCA 90 bp AAACATTTCCTATTTTGCACTAGGGTGAAGAAACCAAGACACAAACATTTGGAATCCCATGAGCCACCATaGTCAGCTAATTTTTATTTT +
Preference number: 2 (lower is better)
Translates to: KHFLFCTRVKKPRHKHLESHEPP*SANFYF
Trigger: AAAATAAAAATTAGCTGAGCATGGTGGCTCATGGGA...TTCCAAATGTTTGTGTCTTGGTTTCTTCACCCTAGTGCAAAATAGGAAATGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR GCA 90 bp TTGATCCTTGATGTGAGAATAACTGTATTCCTTGCATGTTCAGAATGTCCTTATAATATTTCAGCTAACTaGACAAATGAGCCTGCTTCT +
Preference number: 2 (lower is better)
Translates to: LILDVRITVFLACSECPYNISAN*TNEPAS
Trigger: AGAAGCAGGCTCATTTGTGCAGTTAGCTGAAATATT...ATAAGGACATTCTGAACATGCAAGGAATACAGTTATTCTCACATCAAGGATCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR GCA 72 bp GCTGGAGTGCAGTGGTGTGGTGCGATCTTGGCTCACTaGAAGTTCTGCTTCCCGGGTTCACGCCATTCTCCT +
Preference number: 3 (lower is better)
Translates to: AGVQWCGAILAH*KFCFPGSRHSP
Trigger: AGGAGAATGGCGTGAACCCGGGAAGCAGAACTTGCAGTGAGCCAAGATCGCACCACACCACTGCACTCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR TCA 72 bp GGTTTCACCATGTTAGCCAGGATGGTCTCGACCTCGTaGTCTGCCCGCCTCGGCCTCCCAACACTTTTGTTT +
Preference number: 3 (lower is better)
Translates to: GFTMLARMVSTS*SARLGLPTLLF
Trigger: AAACAAAAGTGTTGGGAGGCCGAGGCGGGCAGATCACGAGGTCGAGACCATCCTGGCTAACATGGTGAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR CCA 72 bp AGGTGGGAGAAAGAAGGAATACCATGGAGGTGTGTGTaGATGTGTACGCACACAGGAGAGAGTCGGGGCTGG +
Preference number: 3 (lower is better)
Translates to: RWEKEGIPWRCV*MCTHTGESRGW
Trigger: CCAGCCCCGACTCTCTCCTGTGTGCGTACACATCCACACACACCTCCATGGTATTCCTTCTTTCTCCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR CAA 90 bp AGAGGGTCTCCGGGTTATTGCTGTCGGCAGGATTGCTGGGCTGCAGTGTCTTGGTGCAACTTCACAATATaGGGGTGTCCTTCACAGAGT +
Preference number: 3 (lower is better)
Translates to: RGSPGYCCRQDCWAAVSWCNFTI*GCPSQS
Trigger: ACTCTGTGAAGGACACCCCAATATTGTGAAGTTGCA...CCAAGACACTGCAGCCCAGCAATCCTGCCGACAGCAATAACCCGGAGACCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR CAA 90 bp AACTGGAAGAGGGTCTCCGGGTTATTGCTGTCGGCAGGATTGCTGGGCTGCAGTCAAAACCCCTCTCTCTaGTATTTGTTAAAGGCGTGG +
Preference number: 3 (lower is better)
Translates to: NWKRVSGLLLSAGLLGCSQNPSL*YLLKAW
Trigger: CCACGCCTTTAACAAATACAAGAGAGAGGGGTTTTG...ACTGCAGCCCAGCAATCCTGCCGACAGCAATAACCCGGAGACCCTCTTCCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR CAA 90 bp TCTTTCCTCTGGGATCCCGTCAGCTTCTCCTTCCCCAGAGGTCCTGACATTGCTACTATGTTGCCCAGGTaGGTCTCTAACTCCTGGTTT +
Preference number: 3 (lower is better)
Translates to: SFLWDPVSFSFPRGPDIATMLPR*VSNSWF
Trigger: AAACCAGGAGTTAGAGACCAACCTGGGCAACATAGT...AGCAATGTCAGGACCTCTGGGGAAGGAGAAGCTGACGGGATCCCAGAGGAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR TCA 72 bp TTCTGCCTGACAGGCTGCCTTGGGCTACTACACAGCTaGTATGAGTGGACAGCAAAGAGCTGTGTAAACCTG +
Preference number: 3 (lower is better)
Translates to: FCLTGCLGLLHS*YEWTAKSCVNL
Trigger: CAGGTTTACACAGCTCTTTGCTGTCCACTCATATCAGCTGTGTAGTAGCCCAAGGCAGCCTGTCAGGCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR GCA 72 bp CCCAGGTGGGAGTACAGTGGTACAATCTTGGTTCACTaGAACTTCTGCTTCCTGGACTCAAGTGATTCTCCC +
Preference number: 3 (lower is better)
Translates to: PRWEYSGTILVH*NFCFLDSSDSP
Trigger: GGGAGAATCACTTGAGTCCAGGAAGCAGAAGTTGCAGTGAACCAAGATTGTACCACTGTACTCCCACCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR CCA 72 bp ACAGGACTCATCGTAGCCGTTCTGATTCAAGAGCTCTaGGGCGGCATAATGAAGGGTGAAGCATGGAGTCTT +
Preference number: 3 (lower is better)
Translates to: TGLIVAVLIQEL*GGIMKGEAWSL
Trigger: AAGACTCCATGCTTCACCCTTCATTATGCCGCCCCAGAGCTCTTGAATCAGAACGGCTACGATGAGTCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR CAA 90 bp TCTTTCCTCTGGGATCCCGTCAGCTTCTCCTTCCCCAGAGGTCCTGACATTGCTACTCATAAGTGGGAGTaGAACAATGAGAACACATGG +
Preference number: 3 (lower is better)
Translates to: SFLWDPVSFSFPRGPDIATHKWE*NNENTW
Trigger: CCATGTGTTCTCATTGTTCAACTCCCACTTATGAGT...AGCAATGTCAGGACCTCTGGGGAAGGAGAAGCTGACGGGATCCCAGAGGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR CAA 90 bp TCTTTCCTCTGGGATCCCGTCAGCTTCTCCTTCCCCAGAGGTCCTGACATTGCTAGTAATCCCACTTGGTaGAAGAGACAAAAGTTGGAG +
Preference number: 3 (lower is better)
Translates to: SFLWDPVSFSFPRGPDIASNPTW*KRQKLE
Trigger: CTCCAACTTTTGTCTCTTCAACCAAGTGGGATTACT...AGCAATGTCAGGACCTCTGGGGAAGGAGAAGCTGACGGGATCCCAGAGGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR TCA 72 bp GTGCACCACTCCAACATCATGCATGTGGCTTACAGCTaGAACAAGCTTCCTCATGATGTAGCTGGCTTCCGT +
Preference number: 3 (lower is better)
Translates to: VHHSNIMHVAYS*NKLPHDVAGFR
Trigger: ACGGAAGCCAGCTACATCATGAGGAAGCTTGTTTCAGCTGTAAGCCACATGCATGATGTTGGAGTGGTGCAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR TCA 72 bp ATTTCCACCGCGCTGGTACACGTCAAACTTCGGTCATaGGATTGGAAGGGAACCTGTCCTGACAACATTGTG +
Preference number: 3 (lower is better)
Translates to: ISTALVHVKLRS*DWKGTCPDNIV
Trigger: CACAATGTTGTCAGGACAGGTTCCCTTCCAATCTCATGACCGAAGTTTGACGTGTACCAGCGCGGTGGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR TCA 72 bp ATCCAGCAAAAAGCAGCAGATGAGAGGCTAACGAGCTaGGCAGCTCTTAGTACTGAGGAGGGAAAGGTTGGA +
Preference number: 3 (lower is better)
Translates to: IQQKAADERLTS*AALSTEEGKVG
Trigger: TCCAACCTTTCCCTCCTCAGTACTAAGAGCTGCTCAGCTCGTTAGCCTCTCATCTGCTGCTTTTTGCTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR GCA 72 bp TTGTTAAAGGCGTGGAAGGTTGCTTTCACACAGGTATaGACGGCAGCTCCGGAAGATCCTAGAATATCCGGA +
Preference number: 3 (lower is better)
Translates to: LLKAWKVAFTQV*TAAPEDPRISG
Trigger: TCCGGATATTCTAGGATCTTCCGGAGCTGCCGTGCATACCTGTGTGAAAGCAACCTTCCACGCCTTTAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR GCA 72 bp CGAGAGTTCGTGGCAAAGTTATCTTGGGGTAAATACTaGAGCAGCAAGTGCTGCTGGCAAGTATTCTTGGGG +
Preference number: 3 (lower is better)
Translates to: REFVAKLSWGKY*SSKCCWQVFLG
Trigger: CCCCAAGAATACTTGCCAGCAGCACTTGCTGCTGCAGTATTTACCCCAAGATAACTTTGCCACGAACTCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR GCA 72 bp CCACAGGTGCTCAAGATGGCGAATCTGTCCTCCCAGTaGAGCCTAGTTTCTATGGAGCTACCATATATGACA +
Preference number: 3 (lower is better)
Translates to: PQVLKMANLSSQ*SLVSMELPYMT
Trigger: TGTCATATATGGTAGCTCCATAGAAACTAGGCTGCACTGGGAGGACAGATTCGCCATCTTGAGCACCTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR CCA 72 bp TCAACACATTGTCTCACAGCTTTCTTACCTGGCAGCTaGCACCACATTAGAATCTCCATGGCCGTGCATGGT +
Preference number: 3 (lower is better)
Translates to: STHCLTAFLPGS*HHIRISMAVHG
Trigger: ACCATGCACGGCCATGGAGATTCTAATGTGGTGCCAGCTGCCAGGTAAGAAAGCTGTGAGACAATGTGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR CAA 90 bp AGAGGGTCTATGACAGCTGCATTACGCTTGAATAGGATGGAAGGAGCAACAAAGCACCAGTCAACTGCCTaGTCATGTCCTGAATCTCCC +
Preference number: 3 (lower is better)
Translates to: RGSMTAALRLNRMEGATKHQSTA*SCPESP
Trigger: GGGAGATTCAGGACATGACAAGGCAGTTGACTGGTG...CTTTGTTGCTCCTTCCATCCTATTCAAGCGTAATGCAGCTGTCATAGACCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR CAA 90 bp GAGGATTGGAGGACAGCTGACTTCCATCTTGTAGCCATTCATTGTACCTCAAGCCCTTCTCCCAGGGGTTaGTCCTTCAAATCTAGGTCA +
Preference number: 3 (lower is better)
Translates to: EDWRTADFHLVAIHCTSSPSPRG*SFKSRS
Trigger: TGACCTAGATTTGAAGGACAAACCCCTGGGAGAAGG...GCTTGAGGTACAATGAATGGCTACAAGATGGAAGTCAGCTGTCCTCCAATCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR TCA 72 bp CCCAGAGGTCCTGACATTGCTTACCAGCCATTGACCTaGAATGAACTGCTTCAACGTGTTCTGAAGGACCTT +
Preference number: 3 (lower is better)
Translates to: PRGPDIAYQPLT*NELLQRVLKDL
Trigger: AAGGTCCTTCAGAACACGTTGAAGCAGTTCATTTCAGGTCAATGGCTGGTAAGCAATGTCAGGACCTCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR GCA 72 bp TCAGGTTTCAGATCCCTGTGCACCACTCCAACATCATaGATGTGGCTTACAGCTGAAACAAGCTTCCTCATG +
Preference number: 3 (lower is better)
Translates to: SGFRSLCTTPTS*MWLTAETSFLM
Trigger: CATGAGGAAGCTTGTTTCAGCTGTAAGCCACATGCATGATGTTGGAGTGGTGCACAGGGATCTGAAACCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR CCA 72 bp GAGCGAAGAAACCTCAGGGAAGTGAGCCTGAAATACTaGTACAGTATCTCCTTGAGGTGTCTGCCAATTGCA +
Preference number: 3 (lower is better)
Translates to: ERRNLREVSLKY*YSISLRCLPIA
Trigger: TGCAATTGGCAGACACCTCAAGGAGATACTGTACCAGTATTTCAGGCTCACTTCCCTGAGGTTTCTTCGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR CAA 90 bp GGAACTCTCACTGGAACTGCTGCGCGTCTCGGTACTGGTGCTAGTCTTTTTCATTCTTGTAGCCATTCATaGTACCTCAAGCCAGACATT +
Preference number: 3 (lower is better)
Translates to: GTLTGTAARLGTGASLFHSCSHS*YLKPDI
Trigger: AATGTCTGGCTTGAGGTACAATGAATGGCTACAAGA...ATGAAAAAGACTAGCACCAGTACCGAGACGCGCAGCAGTTCCAGTGAGAGTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR CAA 90 bp TCTTTCCTCTGGGATCCCGTCAGCTTCTCCTTCCCCAGAGGTCCTGACATTGCTCATAAAATTCCTGCATaGTTGGGAAGTGGTAATGTA +
Preference number: 3 (lower is better)
Translates to: SFLWDPVSFSFPRGPDIAHKIPA*LGSGNV
Trigger: TACATTACCACTTCCCAACAATGCAGGAATTTTATG...AGCAATGTCAGGACCTCTGGGGAAGGAGAAGCTGACGGGATCCCAGAGGAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR CAA 90 bp AGATGTTCTTTGATTTCATCTGCATCACGTGGACCACATCCCAATCTCTTCTTGCACCAGTCAACTGCCTaGTCATGTCCTGAATCTCCC +
Preference number: 3 (lower is better)
Translates to: RCSLISSASRGPHPNLFLHQSTA*SCPESP
Trigger: GGGAGATTCAGGACATGACAAGGCAGTTGACTGGTG...CAAGAAGAGATTGGGATGTGGTCCACGTGATGCAGATGAAATCAAAGAACATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR CAA 90 bp TTCAACTCCCATGTGAAACTGAAGAGGGTCTATGACAGCTGCATTACGCTTGAACCTTCTCCCAGGGGTTaGTCCTTCAAATCTAGGTCA +
Preference number: 3 (lower is better)
Translates to: FNSHVKLKRVYDSCITLEPSPRG*SFKSRS
Trigger: TGACCTAGATTTGAAGGACAAACCCCTGGGAGAAGG...TTCAAGCGTAATGCAGCTGTCATAGACCCTCTTCAGTTTCACATGGGAGTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR CCA 72 bp CGGAAGATCCTAGAATATCCGGAGTCATCAGAGGATTaGAGGACAGCTGACTTCCATCTTGTAGCCATTCAT +
Preference number: 3 (lower is better)
Translates to: RKILEYPESSED*RTADFHLVAIH
Trigger: ATGAATGGCTACAAGATGGAAGTCAGCTGTCCTCCAATCCTCTGATGACTCCGGATATTCTAGGATCTTCCG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR CAA 90 bp GGGCAGGGCTGCGGGAGAATAAGTGGGATCCATTTCTGTGAACTCTTCTGCAAATGGCATCATGCTAGGTaGCTAAAAAGAGTAATATGT +
Preference number: 3 (lower is better)
Translates to: GQGCGRISGIHFCELFCKWHHAR*LKRVIC
Trigger: ACATATTACTCTTTTTAGCAACCTAGCATGATGCCA...TTTGCAGAAGAGTTCACAGAAATGGATCCCACTTATTCTCCCGCAGCCCTGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648062.1
3UTR-3UTR CAA 90 bp TATTTGTTAAAGGCGTGGAAGGTTGCTTTCACACAGGTATGCACGGCAGCTCCGTTGGCTTCCATCCTTTaGCTGATTATTTTGACTGCA +
Preference number: 3 (lower is better)
Translates to: YLLKAWKVAFTQVCTAAPLASIL*LIILTA
Trigger: TGCAGTCAAAATAATCAGCAAAAGGATGGAAGCCAA...CGGAGCTGCCGTGCATACCTGTGTGAAAGCAACCTTCCACGCCTTTAACAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR CAA 90 bp TTAAAGGCGTGGAAGGTTGCTTTCACACAGGTATGCACGGCAGCTCCGGAAGATGACATTTTAAGCCTTTaGTTTGGATCTACTGTGAGA +
Preference number: 3 (lower is better)
Translates to: LKAWKVAFTQVCTAAPEDDILSL*FGSTVR
Trigger: TCTCACAGTAGATCCAAACAAAAGGCTTAAAATGTC...ATCTTCCGGAGCTGCCGTGCATACCTGTGTGAAAGCAACCTTCCACGCCTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR CAA 90 bp GATGAATTAGCTACTGCTTATCAGGCAACTAACAGAGCCGGCAACAGAAAGGTTAGACACAAGAATCACTaGAACCTAGGAGGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: DELATAYQATNRAGNRKVRHKNH*NLGGGG
Trigger: ACCTCCACCTCCTAGGTTCAAGTGATTCTTGTGTCT...AACCTTTCTGTTGCCGGCTCTGTTAGTTGCCTGATAAGCAGTAGCTAATTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR TCA 72 bp GGGATTACTGGCAGGGCAGATAGTCGATTTAAGGAGTaGGGGGCAGTCTTATTAATTTGGTATTGTAAGCCC +
Preference number: 3 (lower is better)
Translates to: GITGRADSRFKE*GAVLLIWYCKP
Trigger: GGGCTTACAATACCAAATTAATAAGACTGCCCCTCACTCCTTAAATCGACTATCTGCCCTGCCAGTAATCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR TCA 72 bp CTAATAAAGCTGGGCACAGGCCAAGGCAGACATGAATaGCAGGCTTTATCTTTCATGGCTCAGTTCTCACAA +
Preference number: 3 (lower is better)
Translates to: LIKLGTGQGRHE*QALSFMAQFSQ
Trigger: TTGTGAGAACTGAGCCATGAAAGATAAAGCCTGTCATTCATGTCTGCCTTGGCCTGTGCCCAGCTTTATTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR TCA 72 bp ATGAATAGATCCACTTTGGTTGGTAATTCTTCTGCCTaGCAGGCTGCCTTGGGCTACTACACAGCTGATATG +
Preference number: 3 (lower is better)
Translates to: MNRSTLVGNSSA*QAALGYYTADM
Trigger: CATATCAGCTGTGTAGTAGCCCAAGGCAGCCTGTCAGGCAGAAGAATTACCAACCAAAGTGGATCTATTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR GCA 72 bp GCAAAGTTATCTTGGGGTAAATACTGCAGCAGCAAGTaGTGCTGGCAAGTATTCTTGGGGCAAACAGGAAAA +
Preference number: 3 (lower is better)
Translates to: AKLSWGKYCSSK*CWQVFLGQTGK
Trigger: TTTTCCTGTTTGCCCCAAGAATACTTGCCAGCAGCACTTGCTGCTGCAGTATTTACCCCAAGATAACTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR CCA 72 bp CACTATCTATATGTAGTTTTAGTGCTCCATTTGGACTaGTCTCTGGCCACTGGATGTCAGTGTTTGGAGCAG +
Preference number: 3 (lower is better)
Translates to: HYLYVVLVLHLD*SLATGCQCLEQ
Trigger: CTGCTCCAAACACTGACATCCAGTGGCCAGAGACCAGTCCAAATGGAGCACTAAAACTACATATAGATAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR CCA 72 bp CAGAGGTCAGAGTGGTGGTTATGTATGAGGACTGACTaGGAGCCTCATCTTGATCTGAATGATGGTTATATG +
Preference number: 3 (lower is better)
Translates to: QRSEWWLCMRTD*EPHLDLNDGYM
Trigger: CATATAACCATCATTCAGATCAAGATGAGGCTCCCAGTCAGTCCTCATACATAACCACCACTCTGACCTCTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR CCA 72 bp CAAAAGGAATATGCTCTTTCAGTAGTTCCATGTGGATaGGGGAGGTCTCACAATCATGGTGGAAGGCAAGAA +
Preference number: 3 (lower is better)
Translates to: QKEYALSVVPCG*GRSHNHGGRQE
Trigger: TTCTTGCCTTCCACCATGATTGTGAGACCTCCCCCATCCACATGGAACTACTGAAAGAGCATATTCCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648062.1
3UTR-3UTR CAA 90 bp CAAGCCAGACATTTTAAGCCTTTTGTTTGGATCTACTGTGAGAAGTCCTTGGATGGTGCAGGCACTTTTTaGGCGGCTAAATCATCCCAA +
Preference number: 3 (lower is better)
Translates to: QARHFKPFVWIYCEKSLDGAGTF*AAKSSQ
Trigger: TTGGGATGATTTAGCCGCCAAAAAAGTGCCTGCACC...ATCCAAGGACTTCTCACAGTAGATCCAAACAAAAGGCTTAAAATGTCTGGCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR CAA 90 bp AGGACAGCTGACTTCCATCTTGTAGCCATTCATTGTACCTCAAGCCAGACATTTCAAATCTTTAGCCTCTaGGGATACATTCTTCCAGGC +
Preference number: 3 (lower is better)
Translates to: RTADFHLVAIHCTSSQTFQIFSL*GYILPG
Trigger: GCCTGGAAGAATGTATCCCAAGAGGCTAAAGATTTG...AAATGTCTGGCTTGAGGTACAATGAATGGCTACAAGATGGAAGTCAGCTGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR-3UTR CAA 90 bp GATGAATTAGCTACTGCTTATCAGGCAACTAACAGAGCCGGCAACAGAAAGGTTGTTAGGGAATTGGGCTaGCAAAAGGTAGGCCAAATA +
Preference number: 3 (lower is better)
Translates to: DELATAYQATNRAGNRKVVRELG*QKVGQI
Trigger: TATTTGGCCTACCTTTTGCAAGCCCAATTCCCTAAC...AACCTTTCTGTTGCCGGCTCTGTTAGTTGCCTGATAAGCAGTAGCTAATTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR CAA 90 bp GATGAATTAGCTACTGCTTATCAGGCAACTAACAGAGCCGGCAACAGAAAGGTTGAAACATACAGCACTTaGACATCTGTCCGAGCACTA +
Preference number: 3 (lower is better)
Translates to: DELATAYQATNRAGNRKVETYST*TSVRAL
Trigger: TAGTGCTCGGACAGATGTCAAAGTGCTGTATGTTTC...AACCTTTCTGTTGCCGGCTCTGTTAGTTGCCTGATAAGCAGTAGCTAATTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR TCA 72 bp GCAGGGCTGCGGGAGAATAAGTGGGATCCATTTCTGTaGACTCTTCTGCAAAGTTACTCACATCTAATTCAT +
Preference number: 3 (lower is better)
Translates to: AGLRENKWDPFL*TLLQSYSHLIH
Trigger: ATGAATTAGATGTGAGTAACTTTGCAGAAGAGTTCACAGAAATGGATCCCACTTATTCTCCCGCAGCCCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
3UTR TCA 72 bp CCCTTTAGGTTTTCCTCACATTGGTGCATAAGTGGCTaGCTACATGACACAACATGCCCCATTCTACTTGTT +
Preference number: 3 (lower is better)
Translates to: PFRFSSHWCISG*LHDTTCPILLV
Trigger: AACAAGTAGAATGGGGCATGTTGTGTCATGTAGTCAGCCACTTATGCACCAATGTGAGGAAAACCTAAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614987.5
ENST00000648062.1
3UTR TCA 72 bp ATAACATTAGGAGAAATACCTAATTTGGTGACAGGTTaGTGGGTGCAGCAAACCACCAGGGCACGTGTATAC +
Preference number: 3 (lower is better)
Translates to: ITLGEIPNLVTG*WVQQTTRARVY
Trigger: GTATACACGTGCCCTGGTGGTTTGCTGCACCCATCAACCTGTCACCAAATTAGGTATTTCTCCTAATGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR TCA 72 bp TTTACTAATAAAGCTGGGCACAGGCCAAGGCAGACATaGATGACAGGCTTTATCTTTCATGGCTCAGTTCTC +
Preference number: 3 (lower is better)
Translates to: FTNKAGHRPRQT*MTGFIFHGSVL
Trigger: GAGAACTGAGCCATGAAAGATAAAGCCTGTCATTCATGTCTGCCTTGGCCTGTGCCCAGCTTTATTAGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR GCA 72 bp TATCTCCTTGAGGTGTCTGCCAATTGCAGACTCCTGTaGAACAAGGTGAGACTTCAAGAAATCCAGCAAAAA +
Preference number: 3 (lower is better)
Translates to: YLLEVSANCRLL*NKVRLQEIQQK
Trigger: TTTTTGCTGGATTTCTTGAAGTCTCACCTTGTTGCACAGGAGTCTGCAATTGGCAGACACCTCAAGGAGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR CCA 72 bp TATGCAATACAATCAGTAAGTGAAGAAGGGAGGGGGTaGTGTGGCTCTAGTCCCAAAGTTAATGTCATAAGG +
Preference number: 3 (lower is better)
Translates to: YAIQSVSEEGRG*CGSSPKVNVIR
Trigger: CCTTATGACATTAACTTTGGGACTAGAGCCACACCACCCCCTCCCTTCTTCACTTACTGATTGTATTGCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR CCA 72 bp TCAAGGCTCACTGCAGCCAGCTGTTTCACTTTTAAGTaGACACACAAGAGAAATGAGTGTACGTGTCCATTA +
Preference number: 3 (lower is better)
Translates to: SRLTAASCFTFK*THKRNECTCPL
Trigger: TAATGGACACGTACACTCATTTCTCTTGTGTGTCCACTTAAAAGTGAAACAGCTGGCTGCAGTGAGCCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR CCA 72 bp TTGTACCAGAGAAAACTCTGTATATACCAGTACAGGTaGGGGATTACTGGCAGGGCAGATAGTCGATTTAAG +
Preference number: 3 (lower is better)
Translates to: LYQRKLCIYQYR*GITGRADSRFK
Trigger: CTTAAATCGACTATCTGCCCTGCCAGTAATCCCCCACCTGTACTGGTATATACAGAGTTTTCTCTGGTACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR CAA 90 bp CAAGCCAGACATTTTAAGCCTTTTGTTTGGATCTACTGTGAGAAGTCCTTGGATACAGCTGCATTACGCTaGAATAGGATGGAAGGAGCA +
Preference number: 3 (lower is better)
Translates to: QARHFKPFVWIYCEKSLDTAALR*NRMEGA
Trigger: TGCTCCTTCCATCCTATTCAAGCGTAATGCAGCTGT...ATCCAAGGACTTCTCACAGTAGATCCAAACAAAAGGCTTAAAATGTCTGGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
3UTR TCA 72 bp GTTTTCCTCACATTGGTGCATAAGTGGCTGACTACATaGCACAACATGCCCCATTCTACTTGTTGCATACAA +
Preference number: 3 (lower is better)
Translates to: VFLTLVHKWLTT*HNMPHSTCCIQ
Trigger: TTGTATGCAACAAGTAGAATGGGGCATGTTGTGTCATGTAGTCAGCCACTTATGCACCAATGTGAGGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614987.5
ENST00000648062.1
3UTR TCA 72 bp GAGACCCTGTCTCACACAAAGGCAACTCATTTGAGCTaGGGCTTGGCTATACTTTTAATTGTCCACATAGAA +
Preference number: 3 (lower is better)
Translates to: ETLSHTKATHLS*GLAILLIVHIE
Trigger: TTCTATGTGGACAATTAAAAGTATAGCCAAGCCTCAGCTCAAATGAGTTGCCTTTGTGTGAGACAGGGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR CAA 90 bp TCACTATCTATATGTAGTTTTAGTGCTCCATTTGGACTGGTCTCTGGCCACTGGCTAACTGCTTCAAACTaGGCATCAAATGCTGTCTTT +
Preference number: 3 (lower is better)
Translates to: SLSICSFSAPFGLVSGHWLTASN*ASNAVF
Trigger: AAAGACAGCATTTGATGCCAAGTTTGAAGCAGTTAG...CCAGTGGCCAGAGACCAGTCCAAATGGAGCACTAAAACTACATATAGATAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR CCA 72 bp TCTATGGATTTGCCCATTCTGGACATTTCATGTAAGTaGAATCATACAATACGTGGCCTTGTGTGTCTGGTT +
Preference number: 3 (lower is better)
Translates to: SMDLPILDISCK*NHTIRGLVCLV
Trigger: AACCAGACACACAAGGCCACGTATTGTATGATTCCACTTACATGAAATGTCCAGAATGGGCAAATCCATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR CAA 90 bp TTGATCCTTGATGTGAGAATAACTGTATTCCTTGCATGTTCAGAATGTCCTTATAGGCAGGCTCATCAGTaGACAGCTAGCCTATCTTTC +
Preference number: 3 (lower is better)
Translates to: LILDVRITVFLACSECPYRQAHQ*TASLSF
Trigger: GAAAGATAGGCTAGCTGTCAACTGATGAGCCTGCCT...ATAAGGACATTCTGAACATGCAAGGAATACAGTTATTCTCACATCAAGGATCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR CAA 90 bp GATGAATTAGCTACTGCTTATCAGGCAACTAACAGAGCCGGCAACAGAAAGGTTTCAAATGCTGTCTTTTaGGTACTTATAAGTAGGGTG +
Preference number: 3 (lower is better)
Translates to: DELATAYQATNRAGNRKVSNAVF*VLISRV
Trigger: CACCCTACTTATAAGTACCAAAAAGACAGCATTTGA...AACCTTTCTGTTGCCGGCTCTGTTAGTTGCCTGATAAGCAGTAGCTAATTCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR CAA 90 bp TTGTTTGAAGGGTGCAAATTTCAAAAACCCACATTGTCCACAAGGCAAAGCAAAATGAGTCATTTCTTGTaGGCAGACATCTGGAAAACC +
Preference number: 3 (lower is better)
Translates to: LFEGCKFQKPTLSTRQSKMSHFL*ADIWKT
Trigger: GGTTTTCCAGATGTCTGCCAACAAGAAATGACTCAT...TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAATTTGCACCCTTCAAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
3UTR TCA 72 bp GAGTCATTTCTTGTTGGCAGACATCTGGAAAACCTGTaGCTTACAAGCAGCTCAAATCTAGCCCTAATTAAA +
Preference number: 3 (lower is better)
Translates to: ESFLVGRHLENL*LTSSSNLALIK
Trigger: TTTAATTAGGGCTAGATTTGAGCTGCTTGTAAGTCACAGGTTTTCCAGATGTCTGCCAACAAGAAATGACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
3UTR TCA 72 bp AAAATACGAGAAAAAGTGCATGTACGGAGTATGGGATaGACTGATGCAGTTAAGGAAGACAACTCACAAAGC +
Preference number: 3 (lower is better)
Translates to: KIREKVHVRSMG*TDAVKEDNSQS
Trigger: GCTTTGTGAGTTGTCTTCCTTAACTGCATCAGTTCATCCCATACTCCGTACATGCACTTTTTCTCGTATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR TCA 72 bp ACTCTAAGATTCTCGTATGTGCTGAAAACACTGCTATaGCGACAGTTTGATCTGATCATCTATGCATTCCTC +
Preference number: 3 (lower is better)
Translates to: TLRFSYVLKTLL*RQFDLIIYAFL
Trigger: GAGGAATGCATAGATGATCAGATCAAACTGTCGTCATAGCAGTGTTTTCAGCACATACGAGAATCTTAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR CCA 72 bp CGAAATAACTTCATATCTATAGCAACGAAGGGAACATaGAACATTAGCCCTCCTAAACAATTCCAGAAGAGG +
Preference number: 3 (lower is better)
Translates to: RNNFISIATKGT*NISPPKQFQKR
Trigger: CCTCTTCTGGAATTGTTTAGGAGGGCTAATGTTCCATGTTCCCTTCGTTGCTATAGATATGAAGTTATTTCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR-3UTR CAA 90 bp TTGTTTGAAGGGTGCAAATTTCAAAAACCCACATTGTCCACAAGGCAAAGCAAATTTCAAAAACCCACATaGTCCACAAGGCAAAGCAAA +
Preference number: 3 (lower is better)
Translates to: LFEGCKFQKPTLSTRQSKFQKPT*STRQSK
Trigger: TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAA...TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAATTTGCACCCTTCAAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
3UTR GCA 72 bp CGGCAACCATTTAGTAGCCTTTCTATAAAAACAGGCTaGAAGTGCCAAAGTGACACAGATCTTATCTTAAAT +
Preference number: 3 (lower is better)
Translates to: RQPFSSLSIKTG*KCQSDTDLILN
Trigger: ATTTAAGATAAGATCTGTGTCACTTTGGCACTTGCAGCCTGTTTTTATAGAAAGGCTACTAAATGGTTGCCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR CCA 72 bp TATCAATGCCAGAAGCCACTGCGGAGAAATCAACAATaGCGATTAAAAATGATTACCACCAGATTTTTGCTT +
Preference number: 3 (lower is better)
Translates to: YQCQKPLRRNQQ*RLKMITTRFLL
Trigger: AAGCAAAAATCTGGTGGTAATCATTTTTAATCGCCATTGTTGATTTCTCCGCAGTGGCTTCTGGCATTGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR CCA 72 bp GGATGTGGAAGAACTAGAACACTTACACATTATTGGTaGGTATGTAAATTGGTACAACCATTGTTGAAAACC +
Preference number: 3 (lower is better)
Translates to: GCGRTRTLTHYW*VCKLVQPLLKT
Trigger: GGTTTTCAACAATGGTTGTACCAATTTACATACCCACCAATAATGTGTAAGTGTTCTAGTTCTTCCACATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR CCA 72 bp ACACTAATCTTTCTGTCTCTATGGATTTGCCCATTCTaGACATTTCATGTAAGTGGAATCATACAATACGTG +
Preference number: 3 (lower is better)
Translates to: TLIFLSLWICPF*TFHVSGIIQYV
Trigger: CACGTATTGTATGATTCCACTTACATGAAATGTCCAGAATGGGCAAATCCATAGAGACAGAAAGATTAGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR TCA 72 bp TTCATCTCTTTGCTTTGCCAGGAACAAAGTTTCAAGTaGTATCTCCATCAGCGAATAAAAAGATGTATAAGT +
Preference number: 3 (lower is better)
Translates to: FISLLCQEQSFK*YLHQRIKRCIS
Trigger: ACTTATACATCTTTTTATTCGCTGATGGAGATATCACTTGAAACTTTGTTCCTGGCAAAGCAAAGAGATGAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR TCA 72 bp AATGGAGTACTAACCACTAATTTCCAGTTTGCCACATaGAAGGCATACTTCCAACTTTTATTTTATCCACAT +
Preference number: 3 (lower is better)
Translates to: NGVLTTNFQFAT*KAYFQLLFYPH
Trigger: ATGTGGATAAAATAAAAGTTGGAAGTATGCCTTTCATGTGGCAAACTGGAAATTAGTGGTTAGTACTCCATT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR GCA 72 bp AGCAACGAAAAAGAACAAACTACTGTTATTGCTACATaGAACAACATAGATGCATTTCACAGACATAATGCT +
Preference number: 3 (lower is better)
Translates to: SNEKEQTTVIAT*NNIDAFHRHNA
Trigger: AGCATTATGTCTGTGAAATGCATCTATGTTGTTGCATGTAGCAATAACAGTAGTTTGTTCTTTTTCGTTGCT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR CCA 72 bp CTGATCAAATTAAACCAGACACAAAAACCTATAGACTaGATAATTCCATGTATAGGAATGTCAACAACAGTG +
Preference number: 3 (lower is better)
Translates to: LIKLNQTQKPID*IIPCIGMSTTV
Trigger: CACTGTTGTTGACATTCCTATACATGGAATTATCCAGTCTATAGGTTTTTGTGTCTGGTTTAATTTGATCAG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp AGAACTCTGGGGCAGGGCTGCGGGAGAATAAGTGGGATCCATTTCTGTGAACTCCGGCGCCGCCGCTGCTaGCACCCTCCTCCTCCATCT +
Preference number: 4 (lower is better)
Translates to: RTLGQGCGRISGIHFCELRRRRC*HPPPPS
Trigger: AGATGGAGGAGGAGGGTGGCAGCAGCGGCGGCGCCG...GAGTTCACAGAAATGGATCCCACTTATTCTCCCGCAGCCCTGCCCCAGAGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554206.1
ENST00000648062.1
CDS-3UTR CCA 90 bp GGTCTCCGGGTTATTGCTGTCGGCAGGATTGCTGGGCTGCAGTGTCTTGGTGGGTGTCGGCAGGATTGCTaGGCTGCAGTGTCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: GLRVIAVGRIAGLQCLGGCRQDC*AAVSWW
Trigger: CCACCAAGACACTGCAGCCCAGCAATCCTGCCGACA...CCCACCAAGACACTGCAGCCCAGCAATCCTGCCGACAGCAATAACCCGGAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR GCA 90 bp AACTGGAAGAGGGTCTCCGGGTTATTGCTGTCGGCAGGATTGCTGGGCTGCAGTTCTCACTGGAACTGCTaGGCGTCTCGGTACTGGTGC +
Preference number: 4 (lower is better)
Translates to: NWKRVSGLLLSAGLLGCSSHWNC*ASRYWC
Trigger: GCACCAGTACCGAGACGCGCAGCAGTTCCAGTGAGA...ACTGCAGCCCAGCAATCCTGCCGACAGCAATAACCCGGAGACCCTCTTCCAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR TCA 90 bp CCACAGGTCACAGGACTCATCGTAGCCGTTCTGATTCAAGAGCTCTGGGGCGGCCGGCATAATGAAGGGTaGAGCATGGAGTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: PQVTGLIVAVLIQELWGGRHNEG*SMESSG
Trigger: CCCTGAAGACTCCATGCTTCACCCTTCATTATGCCG...GCCGCCCCAGAGCTCTTGAATCAGAACGGCTACGATGAGTCCTGTGACCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR GCA 90 bp GGTCTCCGGGTTATTGCTGTCGGCAGGATTGCTGGGCTGCAGTGTCTTGGTGGGGGTTTCAGATCCCTGTaGACCACTCCAACATCATGC +
Preference number: 4 (lower is better)
Translates to: GLRVIAVGRIAGLQCLGGGFRSL*TTPTSC
Trigger: GCATGATGTTGGAGTGGTGCACAGGGATCTGAAACC...CCCACCAAGACACTGCAGCCCAGCAATCCTGCCGACAGCAATAACCCGGAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR GCA 90 bp AGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACTGATACACTGCGCTGGCCCCGATaGCTGGTGCCCGCCGCTCAT +
Preference number: 4 (lower is better)
Translates to: RSPQAYAEGIKVQWITDTLRWPR*LVPAAH
Trigger: ATGAGCGGCGGGCACCAGGCATCGGGGCCAGCGCAG...TGTATCAGTGATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536315.6
CDS-3UTR TCA 90 bp GGTCTCCGGGTTATTGCTGTCGGCAGGATTGCTGGGCTGCAGTGTCTTGGTGGGGCACCTCATGCTCTGTaGAACGCTCTCTTTGAGAAA +
Preference number: 4 (lower is better)
Translates to: GLRVIAVGRIAGLQCLGGAPHAL*NALFEK
Trigger: TTTCTCAAAGAGAGCGTTTCACAGAGCATGAGGTGC...CCCACCAAGACACTGCAGCCCAGCAATCCTGCCGACAGCAATAACCCGGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648062.1
CDS-3UTR TCA 90 bp TCTTTCCTCTGGGATCCCGTCAGCTTCTCCTTCCCCAGAGGTCCTGACATTGCTGAGGCAAAGGGAGGCTaGGTGATTTGCTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: SFLWDPVSFSFPRGPDIAEAKGG*VICSGS
Trigger: TGACCCTGAGCAAATCACTCAGCCTCCCTTTGCCTC...AGCAATGTCAGGACCTCTGGGGAAGGAGAAGCTGACGGGATCCCAGAGGAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp TTCCTAGGACCTTCAGGAGCTCAAAATTTTCTATTCCCACCTTCTCAGCATGTCCCCCAGGAGTCGGGGTaGGGCGGCTCCAGAACTCGG +
Preference number: 4 (lower is better)
Translates to: FLGPSGAQNFLFPPSQHVPQESG*GGSRTR
Trigger: CCGAGTTCTGGAGCCGCCGCACCCCGACTCCTGGGG...GACATGCTGAGAAGGTGGGAATAGAAAATTTTGAGCTCCTGAAGGTCCTAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000556594.1
CDS-3UTR GCA 90 bp GATGAATTAGCTACTGCTTATCAGGCAACTAACAGAGCCGGCAACAGAAAGGTTCGGCGCCGCCGCTGCTaGCACCCTCCTCCTCCATCT +
Preference number: 4 (lower is better)
Translates to: DELATAYQATNRAGNRKVRRRRC*HPPPPS
Trigger: AGATGGAGGAGGAGGGTGGCAGCAGCGGCGGCGCCG...AACCTTTCTGTTGCCGGCTCTGTTAGTTGCCTGATAAGCAGTAGCTAATTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp AGGACAGCTGACTTCCATCTTGTAGCCATTCATTGTACCTCAAGCCAGACATTTCGGCGCCGCCGCTGCTaGCACCCTCCTCCTCCATCT +
Preference number: 4 (lower is better)
Translates to: RTADFHLVAIHCTSSQTFRRRRC*HPPPPS
Trigger: AGATGGAGGAGGAGGGTGGCAGCAGCGGCGGCGCCG...AAATGTCTGGCTTGAGGTACAATGAATGGCTACAAGATGGAAGTCAGCTGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648062.1
CDS-3UTR GCA 90 bp GTTAAAGGCGTGGAAGGTTGCTTTCACACAGGTATGCACGGCAGCTCCGGAAGAGGGTCTCCGGGTTATTaGTGTCGGCAGGATTGCTGG +
Preference number: 4 (lower is better)
Translates to: VKGVEGCFHTGMHGSSGRGSPGY*CRQDCW
Trigger: CCAGCAATCCTGCCGACAGCAATAACCCGGAGACCC...TCTTCCGGAGCTGCCGTGCATACCTGTGTGAAAGCAACCTTCCACGCCTTTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CCA 90 bp CAGGGCTGCGGGAGAATAAGTGGGATCCATTTCTGTGAACTCTTCTGCAAAGTTGTCTCTTTCCCGCTCTaGCCGCACGGCTCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: QGCGRISGIHFCELFCKVVSFPL*PHGSLL
Trigger: GAGGAGCGAGCCGTGCGGCCAGAGCGGGAAAGAGAC...AACTTTGCAGAAGAGTTCACAGAAATGGATCCCACTTATTCTCCCGCAGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554206.1
ENST00000648062.1
CDS-3UTR CCA 90 bp TCTTTCCTCTGGGATCCCGTCAGCTTCTCCTTCCCCAGAGGTCCTGACATTGCTTGGAGTGCAGTGGTGTaGTGCGATCTTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: SFLWDPVSFSFPRGPDIAWSAVV*CDLGSL
Trigger: CAGTGAGCCAAGATCGCACCACACCACTGCACTCCA...AGCAATGTCAGGACCTCTGGGGAAGGAGAAGCTGACGGGATCCCAGAGGAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp AGAGGGTCTCCGGGTTATTGCTGTCGGCAGGATTGCTGGGCTGCAGTGTCTTGGCAGCTGCATTACGCTTaGATAGGATGGAAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: RGSPGYCCRQDCWAAVSWQLHYA*IGWKEQ
Trigger: TTGCTCCTTCCATCCTATTCAAGCGTAATGCAGCTG...CCAAGACACTGCAGCCCAGCAATCCTGCCGACAGCAATAACCCGGAGACCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR TCA 90 bp TCTTTCCTCTGGGATCCCGTCAGCTTCTCCTTCCCCAGAGGTCCTGACATTGCTTACATGCCAGCTGAGTaGCTTGCAAAGGTTTGCCCC +
Preference number: 4 (lower is better)
Translates to: SFLWDPVSFSFPRGPDIAYMPAE*LAKVCP
Trigger: GGGGCAAACCTTTGCAAGTCACTCAGCTGGCATGTA...AGCAATGTCAGGACCTCTGGGGAAGGAGAAGCTGACGGGATCCCAGAGGAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATCCCCAGGAGTCGGGGTaGGGCGGCTCCAGAACTCGG +
Preference number: 4 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNPQESG*GGSRTR
Trigger: CCGAGTTCTGGAGCCGCCGCACCCCGACTCCTGGGG...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR GCA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATCGGCGCCGCCGCTGCTaGCACCCTCCTCCTCCATCT +
Preference number: 4 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNRRRRC*HPPPPS
Trigger: AGATGGAGGAGGAGGGTGGCAGCAGCGGCGGCGCCG...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR GCA 90 bp TCATCATTGCACTCCTGGCAACATTTGTCACTCCAGGACGTTCAACTCCCATGTTTGACAGTGAGGAGCTaGTCTCCTCCGTCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: SSLHSWQHLSLQDVQLPCLTVRS*SPPSPP
Trigger: CGGCGGCGACGGAGGAGAGCAGCTCCTCACTGTCAA...ACATGGGAGTTGAACGTCCTGGAGTGACAAATGTTGCCAGGAGTGCAATGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648062.1
CDS-3UTR CCA 90 bp AGCTCCACAGGTCACAGGACTCATCGTAGCCGTTCTGATTCAAGAGCTCTGGGGACTGAGTCCGAGAACTaGAAGAGGGTCTCCGGGTTA +
Preference number: 4 (lower is better)
Translates to: SSTGHRTHRSRSDSRALGTESEN*KRVSGL
Trigger: TAACCCGGAGACCCTCTTCCAGTTCTCGGACTCAGT...CCCCAGAGCTCTTGAATCAGAACGGCTACGATGAGTCCTGTGACCTGTGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CCA 90 bp AGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACTGATACAACGGCTGGGCAAAGCTaGGAGGCTGAGGCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: RSPQAYAEGIKVQWITDTTAGQS*EAEAGG
Trigger: TCCTCCCGCCTCAGCCTCCCAGCTTTGCCCAGCCGT...TGTATCAGTGATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp TCTTTCCTCTGGGATCCCGTCAGCTTCTCCTTCCCCAGAGGTCCTGACATTGCTGGCAGGAAATTGCACTaGGTGAGCTCTAAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: SFLWDPVSFSFPRGPDIAGRKLH*VSSKAP
Trigger: AGGAGCCTTAGAGCTCACCCAGTGCAATTTCCTGCC...AGCAATGTCAGGACCTCTGGGGAAGGAGAAGCTGACGGGATCCCAGAGGAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp GGTCTCCGGGTTATTGCTGTCGGCAGGATTGCTGGGCTGCAGTGTCTTGGTGGGGAAGGGAACCTGTCCTaGCAACATTGTGTACAAAAT +
Preference number: 4 (lower is better)
Translates to: GLRVIAVGRIAGLQCLGGEGNLS*QHCVQN
Trigger: ATTTTGTACACAATGTTGTCAGGACAGGTTCCCTTC...CCCACCAAGACACTGCAGCCCAGCAATCCTGCCGACAGCAATAACCCGGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR TCA 90 bp AGCTCCACAGGTCACAGGACTCATCGTAGCCGTTCTGATTCAAGAGCTCTGGGGGGATTGGAGGACAGCTaGCTTCCATCTTGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: SSTGHRTHRSRSDSRALGGLEDS*LPSCSH
Trigger: ATGGCTACAAGATGGAAGTCAGCTGTCCTCCAATCC...CCCCAGAGCTCTTGAATCAGAACGGCTACGATGAGTCCTGTGACCTGTGGAGCT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR GCA 90 bp CCATCAACAGTGAAAGGAGATGCTCCAGTTAGTAATTCATACATTAGAACACCCCCCCAGGAGTCGGGGTaGGGCGGCTCCAGAACTCGG +
Preference number: 4 (lower is better)
Translates to: PSTVKGDAPVSNSYIRTPPQESG*GGSRTR
Trigger: CCGAGTTCTGGAGCCGCCGCACCCCGACTCCTGGGG...GGGTGTTCTAATGTATGAATTACTAACTGGAGCATCTCCTTTCACTGTTGATGG
53% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000554206.1
ENST00000648062.1
CDS-3UTR GCA 90 bp AGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACTGATACATTGACAGTGAGGAGCTaGTCTCCTCCGTCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: RSPQAYAEGIKVQWITDTLTVRS*SPPSPP
Trigger: CGGCGGCGACGGAGGAGAGCAGCTCCTCACTGTCAA...TGTATCAGTGATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614987.5
ENST00000648062.1
CDS-3UTR GCA 90 bp TTGTTTGAAGGGTGCAAATTTCAAAAACCCACATTGTCCACAAGGCAAAGCAAAGGCCCCGATGCCTGGTaGCCGCCGCTCATTCCCGGG +
Preference number: 4 (lower is better)
Translates to: LFEGCKFQKPTLSTRQSKGPDAW*PPLIPG
Trigger: CCCGGGAATGAGCGGCGGGCACCAGGCATCGGGGCC...TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAATTTGCACCCTTCAAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536315.6
CDS-3UTR GCA 90 bp ACCCACATTGTCCACAAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTATCCTCGGAGGTGCGTaGCACGGGCAGCGGTCGGCG +
Preference number: 4 (lower is better)
Translates to: THIVHKAKQKVSSQYESFILGGA*HGQRSA
Trigger: CGCCGACCGCTGCCCGTGGCACGCACCTCCGAGGAT...AAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTTGTGGACAATGTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536315.6
CDS-3UTR CCA 90 bp TCTTTCCTCTGGGATCCCGTCAGCTTCTCCTTCCCCAGAGGTCCTGACATTGCTAGCAATCCTTCCTCTTaGCCTCCCAAAGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: SFLWDPVSFSFPRGPDIASNPSS*PPKVLG
Trigger: TCCCAACACTTTGGGAGGCCAAGAGGAAGGATTGCT...AGCAATGTCAGGACCTCTGGGGAAGGAGAAGCTGACGGGATCCCAGAGGAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp TCTTTCCTCTGGGATCCCGTCAGCTTCTCCTTCCCCAGAGGTCCTGACATTGCTGCGCAGGCACCTTGGTaGTCTGAATCTAATAGATGC +
Preference number: 4 (lower is better)
Translates to: SFLWDPVSFSFPRGPDIAAQAPW*SESNRC
Trigger: GCATCTATTAGATTCAGACCACCAAGGTGCCTGCGC...AGCAATGTCAGGACCTCTGGGGAAGGAGAAGCTGACGGGATCCCAGAGGAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp GTTAAAGGCGTGGAAGGTTGCTTTCACACAGGTATGCACGGCAGCTCCGGAAGATGCCTTGTCATGTCCTaGATCTCCCCCTCTGACAAT +
Preference number: 4 (lower is better)
Translates to: VKGVEGCFHTGMHGSSGRCLVMS*ISPSDN
Trigger: ATTGTCAGAGGGGGAGATTCAGGACATGACAAGGCA...TCTTCCGGAGCTGCCGTGCATACCTGTGTGAAAGCAACCTTCCACGCCTTTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR TCA 90 bp CCACCGCGCTGGTACACGTCAAACTTCGGTCATGAGATTGGAAGGGAACCTGTCACATTGTGTACAAAATaGCGCCCAAGCTCCACAGGT +
Preference number: 4 (lower is better)
Translates to: PPRWYTSNFGHEIGREPVTLCTK*RPSSTG
Trigger: ACCTGTGGAGCTTGGGCGTCATTTTGTACACAATGT...GACAGGTTCCCTTCCAATCTCATGACCGAAGTTTGACGTGTACCAGCGCGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR TCA 90 bp CGAGCTGAGCAGCTCTTAGTACTGAGGAGGGAAAGGTTGGAATTCAAGGTCACCCCATGCCTAAGCTACTaGGTCCGAGAACTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: RAEQLLVLRRERLEFKVTPCLSY*VRELEE
Trigger: CTCTTCCAGTTCTCGGACTCAGTAGCTTAGGCATGG...GGTGACCTTGAATTCCAACCTTTCCCTCCTCAGTACTAAGAGCTGCTCAGCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp TCTTTCCTCTGGGATCCCGTCAGCTTCTCCTTCCCCAGAGGTCCTGACATTGCTAGATGGAACAAAGGGTaGCGTTACCCGTTGATGCTA +
Preference number: 4 (lower is better)
Translates to: SFLWDPVSFSFPRGPDIARWNKG*RYPLML
Trigger: TAGCATCAACGGGTAACGTCACCCTTTGTTCCATCT...AGCAATGTCAGGACCTCTGGGGAAGGAGAAGCTGACGGGATCCCAGAGGAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp TTGTTTGAAGGGTGCAAATTTCAAAAACCCACATTGTCCACAAGGCAAAGCAAACCCCAGGAGTCGGGGTaGGGCGGCTCCAGAACTCGG +
Preference number: 4 (lower is better)
Translates to: LFEGCKFQKPTLSTRQSKPQESG*GGSRTR
Trigger: CCGAGTTCTGGAGCCGCCGCACCCCGACTCCTGGGG...TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAATTTGCACCCTTCAAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000614987.5
ENST00000648062.1
CDS-3UTR GCA 90 bp TTCCTAGGACCTTCAGGAGCTCAAAATTTTCTATTCCCACCTTCTCAGCATGTCTTGACAGTGAGGAGCTaGTCTCCTCCGTCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: FLGPSGAQNFLFPPSQHVLTVRS*SPPSPP
Trigger: CGGCGGCGACGGAGGAGAGCAGCTCCTCACTGTCAA...GACATGCTGAGAAGGTGGGAATAGAAAATTTTGAGCTCCTGAAGGTCCTAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556594.1
CDS-3UTR GCA 90 bp AGAGGGTCTATGACAGCTGCATTACGCTTGAATAGGATGGAAGGAGCAACAAAGGCAGTCCGCAGCTCGTaGTTGACAGTGAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: RGSMTAALRLNRMEGATKAVRSS*LTVRSC
Trigger: GCAGCTCCTCACTGTCAAGCACGAGCTGCGGACTGC...CTTTGTTGCTCCTTCCATCCTATTCAAGCGTAATGCAGCTGTCATAGACCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554206.1
ENST00000648062.1
CDS-3UTR GCA 90 bp ACCCACATTGTCCACAAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTCGACATCCTCGGAGGTaGGTGCCACGGGCAGCGGTC +
Preference number: 4 (lower is better)
Translates to: THIVHKAKQKVSSQYESFRHPRR*VPRAAV
Trigger: GACCGCTGCCCGTGGCACGCACCTCCGAGGATGTCG...AAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTTGTGGACAATGTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536315.6
CDS-3UTR GCA 90 bp AGCTCCACAGGTCACAGGACTCATCGTAGCCGTTCTGATTCAAGAGCTCTGGGGAAAGGCGTGGAAGGTTaGTTTCACACAGGTATGCAC +
Preference number: 4 (lower is better)
Translates to: SSTGHRTHRSRSDSRALGKGVEG*FHTGMH
Trigger: GTGCATACCTGTGTGAAAGCAACCTTCCACGCCTTT...CCCCAGAGCTCTTGAATCAGAACGGCTACGATGAGTCCTGTGACCTGTGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR GCA 90 bp TATTTGTTAAAGGCGTGGAAGGTTGCTTTCACACAGGTATGCACGGCAGCTCCGGCAGGATTGCTGGGCTaGAGTGTCTTGGTGGGTGTA +
Preference number: 4 (lower is better)
Translates to: YLLKAWKVAFTQVCTAAPAGLLG*SVLVGV
Trigger: TACACCCACCAAGACACTGCAGCCCAGCAATCCTGC...CGGAGCTGCCGTGCATACCTGTGTGAAAGCAACCTTCCACGCCTTTAACAAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR GCA 90 bp CGAGCTGAGCAGCTCTTAGTACTGAGGAGGGAAAGGTTGGAATTCAAGGTCACCCAGGGAATCAGAGGTTaGAGTGAGCCAAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: RAEQLLVLRRERLEFKVTQGIRG*SEPRSC
Trigger: GCACGATCTTGGCTCACTGCAACCTCTGATTCCCTG...GGTGACCTTGAATTCCAACCTTTCCCTCCTCAGTACTAAGAGCTGCTCAGCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp GATGAATTAGCTACTGCTTATCAGGCAACTAACAGAGCCGGCAACAGAAAGGTTCGCCTCCCGGGTTCATaGCATTCTCCTGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: DELATAYQATNRAGNRKVRLPGS*HSPASA
Trigger: GGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCG...AACCTTTCTGTTGCCGGCTCTGTTAGTTGCCTGATAAGCAGTAGCTAATTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp CCACAGGTCACAGGACTCATCGTAGCCGTTCTGATTCAAGAGCTCTGGGGCGGCAAAGCACTCATTTCTTaGGGATATGGAGGCTCACTT +
Preference number: 4 (lower is better)
Translates to: PQVTGLIVAVLIQELWGGKALIS*GYGGSL
Trigger: AAGTGAGCCTCCATATCCCCAAGAAATGAGTGCTTT...GCCGCCCCAGAGCTCTTGAATCAGAACGGCTACGATGAGTCCTGTGACCTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CCA 90 bp AGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATCTGGAAAGCTGGCCCCGATGCCTaGTGCCCGCCGCTCATTCCC +
Preference number: 4 (lower is better)
Translates to: SKRYHHSMSHFLLADIWKAGPDA*CPPLIP
Trigger: GGGAATGAGCGGCGGGCACCAGGCATCGGGGCCAGC...TTTCCAGATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536315.6
CDS-3UTR CCA 90 bp CGAGCTGAGCAGCTCTTAGTACTGAGGAGGGAAAGGTTGGAATTCAAGGTCACCCCCGCGCAGGCACCTTaGTGGTCTGAATCTAATAGA +
Preference number: 4 (lower is better)
Translates to: RAEQLLVLRRERLEFKVTPAQAP*WSESNR
Trigger: TCTATTAGATTCAGACCACCAAGGTGCCTGCGCGGG...GGTGACCTTGAATTCCAACCTTTCCCTCCTCAGTACTAAGAGCTGCTCAGCTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp TTAAAGGCGTGGAAGGTTGCTTTCACACAGGTATGCACGGCAGCTCCGGAAGATGGTGCAATGGATCACTaGTACACTCCTACCATGCCT +
Preference number: 4 (lower is better)
Translates to: LKAWKVAFTQVCTAAPEDGAMDH*YTPTMP
Trigger: AGGCATGGTAGGAGTGTATCAGTGATCCATTGCACC...ATCTTCCGGAGCTGCCGTGCATACCTGTGTGAAAGCAACCTTCCACGCCTTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648062.1
CDS-3UTR TCA 90 bp TCTTTCCTCTGGGATCCCGTCAGCTTCTCCTTCCCCAGAGGTCCTGACATTGCTCAGTTTCCTGTGCTCTaGAGAACAGCTGCTATACTA +
Preference number: 4 (lower is better)
Translates to: SFLWDPVSFSFPRGPDIAQFPVL*RTAAIL
Trigger: TAGTATAGCAGCTGTTCTTCAGAGCACAGGAAACTG...AGCAATGTCAGGACCTCTGGGGAAGGAGAAGCTGACGGGATCCCAGAGGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp AGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACTGATACACTGTTCTCCAACTCCTaGCCTCAGGTGATCCACCCG +
Preference number: 4 (lower is better)
Translates to: RSPQAYAEGIKVQWITDTLFSNS*PQVIHP
Trigger: CGGGTGGATCACCTGAGGTCAGGAGTTGGAGAACAG...TGTATCAGTGATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp TCAACAGTGAAAGGAGATGCTCCAGTTAGTAATTCATACATTAGAACACCCAAACCCCAGGAGTCGGGGTaGGGCGGCTCCAGAACTCGG +
Preference number: 4 (lower is better)
Translates to: STVKGDAPVSNSYIRTPKPQESG*GGSRTR
Trigger: CCGAGTTCTGGAGCCGCCGCACCCCGACTCCTGGGG...TTTGGGTGTTCTAATGTATGAATTACTAACTGGAGCATCTCCTTTCACTGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554206.1
ENST00000648062.1
CDS-3UTR GCA 90 bp TGGCATACAGCTTTCCAGTATCATGGCCACTTATTTTACGAACTAGAAATACTTCGGCGCCGCCGCTGCTaGCACCCTCCTCCTCCATCT +
Preference number: 4 (lower is better)
Translates to: WHTAFQYHGHLFYELEILRRRRC*HPPPPS
Trigger: AGATGGAGGAGGAGGGTGGCAGCAGCGGCGGCGCCG...AAGTATTTCTAGTTCGTAAAATAAGTGGCCATGATACTGGAAAGCTGTATGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556594.1
CDS-3UTR GCA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATTTGACAGTGAGGAGCTaGTCTCCTCCGTCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNLTVRS*SPPSPP
Trigger: CGGCGGCGACGGAGGAGAGCAGCTCCTCACTGTCAA...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR GCA 90 bp TCACTATCTATATGTAGTTTTAGTGCTCCATTTGGACTGGTCTCTGGCCACTGGGCAGTCCGCAGCTCGTaGTTGACAGTGAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SLSICSFSAPFGLVSGHWAVRSS*LTVRSC
Trigger: GCAGCTCCTCACTGTCAAGCACGAGCTGCGGACTGC...CCAGTGGCCAGAGACCAGTCCAAATGGAGCACTAAAACTACATATAGATAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp TCTTTCCTCTGGGATCCCGTCAGCTTCTCCTTCCCCAGAGGTCCTGACATTGCTACCACTCCAACATCATaGATGTGGCTTACAGCTGAA +
Preference number: 4 (lower is better)
Translates to: SFLWDPVSFSFPRGPDIATTPTS*MWLTAE
Trigger: TTCAGCTGTAAGCCACATGCATGATGTTGGAGTGGT...AGCAATGTCAGGACCTCTGGGGAAGGAGAAGCTGACGGGATCCCAGAGGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp AGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACTGATACAGGGTCTCCGGGTTATTaGTGTCGGCAGGATTGCTGG +
Preference number: 4 (lower is better)
Translates to: RSPQAYAEGIKVQWITDTGSPGY*CRQDCW
Trigger: CCAGCAATCCTGCCGACAGCAATAACCCGGAGACCC...TGTATCAGTGATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR GCA 90 bp CCAGTTCCTAGGACCTTCAGGAGCTCAAAATTTTCTATTCCCACCTTCTCAGCATCAGTCCGCAGCTCGTaGTTGACAGTGAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PVPRTFRSSKFSIPTFSASVRSS*LTVRSC
Trigger: GCAGCTCCTCACTGTCAAGCACGAGCTGCGGACTGA...TGCTGAGAAGGTGGGAATAGAAAATTTTGAGCTCCTGAAGGTCCTAGGAACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556594.1
CDS-3UTR GCA 90 bp AGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACTGATACACCAAGATCGTGCCACTaGACTGCAGCCTGGCGACAA +
Preference number: 4 (lower is better)
Translates to: RSPQAYAEGIKVQWITDTPRSCH*TAAWRQ
Trigger: TTGTCGCCAGGCTGCAGTGCAGTGGCACGATCTTGG...TGTATCAGTGATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp TCATCATTGCACTCCTGGCAACATTTGTCACTCCAGGACGTTCAACTCCCATGTAATGGGAACTCTCACTaGAACTGCTGCGCGTCTCGG +
Preference number: 4 (lower is better)
Translates to: SSLHSWQHLSLQDVQLPCNGNSH*NCCASR
Trigger: CCGAGACGCGCAGCAGTTCCAGTGAGAGTTCCCATT...ACATGGGAGTTGAACGTCCTGGAGTGACAAATGTTGCCAGGAGTGCAATGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CCA 90 bp AGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACTGATACATGTCGGCAGGATTGCTaGGCTGCAGTGTCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: RSPQAYAEGIKVQWITDTCRQDC*AAVSWW
Trigger: CCACCAAGACACTGCAGCCCAGCAATCCTGCCGACA...TGTATCAGTGATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp TCACTATCTATATGTAGTTTTAGTGCTCCATTTGGACTGGTCTCTGGCCACTGGAGCCTCCCGAGCAGCTaGGACTACAGTCATCCGCCA +
Preference number: 4 (lower is better)
Translates to: SLSICSFSAPFGLVSGHWSLPSS*DYSHPP
Trigger: TGGCGGATGACTGTAGTCCCAGCTGCTCGGGAGGCT...CCAGTGGCCAGAGACCAGTCCAAATGGAGCACTAAAACTACATATAGATAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp CCACCGCGCTGGTACACGTCAAACTTCGGTCATGAGATTGGAAGGGAACCTGTCTGGGATCCATTTCTGTaGACTCTTCTGCAAAGTTAC +
Preference number: 4 (lower is better)
Translates to: PPRWYTSNFGHEIGREPVWDPFL*TLLQSY
Trigger: GTAACTTTGCAGAAGAGTTCACAGAAATGGATCCCA...GACAGGTTCCCTTCCAATCTCATGACCGAAGTTTGACGTGTACCAGCGCGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR TCA 90 bp AGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACTGATACAGGAGTCTTCAGGGGCTaGTTATCCGGTGGCTTTAGC +
Preference number: 4 (lower is better)
Translates to: RSPQAYAEGIKVQWITDTGVFRG*LSGGFS
Trigger: GCTAAAGCCACCGGATAATCAGCCCCTGAAGACTCC...TGTATCAGTGATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR TCA 90 bp GGAATATGCTCTTTCAGTAGTTCCATGTGGATGGGGGAGGTCTCACAATCATGGCCATGCCTAAGCTACTaGGTCCGAGAACTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: GICSFSSSMWMGEVSQSWPCLSY*VRELEE
Trigger: CTCTTCCAGTTCTCGGACTCAGTAGCTTAGGCATGG...CCATGATTGTGAGACCTCCCCCATCCACATGGAACTACTGAAAGAGCATATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648062.1
CDS-3UTR GCA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATGCAGTCCGCAGCTCGTaGTTGACAGTGAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNAVRSS*LTVRSC
Trigger: GCAGCTCCTCACTGTCAAGCACGAGCTGCGGACTGC...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR GCA 90 bp GAGCAACAAAGGAATAGCCCTGAAACAGCTTCTCAGAACTCTGGGGCAGGGCTGACCAAAAATGGCGACTaGCTAATGTGTTCCAGGACT +
Preference number: 4 (lower is better)
Translates to: EQQRNSPETASQNSGAGLTKNGD*LMCSRT
Trigger: AGTCCTGGAACACATTAGGCAGTCGCCATTTTTGGT...CAGCCCTGCCCCAGAGTTCTGAGAAGCTGTTTCAGGGCTATTCCTTTGTTGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
CDS-3UTR GCA 90 bp AGGACAGCTGACTTCCATCTTGTAGCCATTCATTGTACCTCAAGCCAGACATTTTCTCACTGGAACTGCTaGGCGTCTCGGTACTGGTGC +
Preference number: 4 (lower is better)
Translates to: RTADFHLVAIHCTSSQTFSHWNC*ASRYWC
Trigger: GCACCAGTACCGAGACGCGCAGCAGTTCCAGTGAGA...AAATGTCTGGCTTGAGGTACAATGAATGGCTACAAGATGGAAGTCAGCTGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR GCA 90 bp GATGAATTAGCTACTGCTTATCAGGCAACTAACAGAGCCGGCAACAGAAAGGTTAGGCTCCTGCTCTGTTaGCCAGGTGGGAGTACAGTG +
Preference number: 4 (lower is better)
Translates to: DELATAYQATNRAGNRKVRLLLC*PGGSTV
Trigger: CACTGTACTCCCACCTGGGCAACAGAGCAGGAGCCT...AACCTTTCTGTTGCCGGCTCTGTTAGTTGCCTGATAAGCAGTAGCTAATTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp AAGCATAAAAGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCTTCACGCCATTCTTCTaGCTCAGCCTCCCGAGCAGC +
Preference number: 4 (lower is better)
Translates to: KHKRSPQAYAEGIKVQWIFTPFF*LSLPSS
Trigger: GCTGCTCGGGAGGCTGAGGCAGAAGAATGGCGTGAA...GATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCTTTTATGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp GTTAAAGGCGTGGAAGGTTGCTTTCACACAGGTATGCACGGCAGCTCCGGAAGATTCATCTCGAATGACTaGCTTAAATGGTGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: VKGVEGCFHTGMHGSSGRFISND*LKWCRH
Trigger: GTGCCTGCACCATTTAAGCCAGTCATTCGAGATGAA...TCTTCCGGAGCTGCCGTGCATACCTGTGTGAAAGCAACCTTCCACGCCTTTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CCA 90 bp CGAGCTGAGCAGCTCTTAGTACTGAGGAGGGAAAGGTTGGAATTCAAGGTCACCCAGAGGTCAGAGTGGTaGTTATGTATGAGGACTGAC +
Preference number: 4 (lower is better)
Translates to: RAEQLLVLRRERLEFKVTQRSEW*LCMRTD
Trigger: GTCAGTCCTCATACATAACCACCACTCTGACCTCTG...GGTGACCTTGAATTCCAACCTTTCCCTCCTCAGTACTAAGAGCTGCTCAGCTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp TCACTATCTATATGTAGTTTTAGTGCTCCATTTGGACTGGTCTCTGGCCACTGGGCAATGGTGCGACCTTaGCTCACTGCAACCTCCCTC +
Preference number: 4 (lower is better)
Translates to: SLSICSFSAPFGLVSGHWAMVRP*LTATSL
Trigger: GAGGGAGGTTGCAGTGAGCCAAGGTCGCACCATTGC...CCAGTGGCCAGAGACCAGTCCAAATGGAGCACTAAAACTACATATAGATAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp AGAACTCTGGGGCAGGGCTGCGGGAGAATAAGTGGGATCCATTTCTGTGAACTCTGGGATCCATTTCTGTaGACTCTTCTGCAAAGTTAC +
Preference number: 4 (lower is better)
Translates to: RTLGQGCGRISGIHFCELWDPFL*TLLQSY
Trigger: GTAACTTTGCAGAAGAGTTCACAGAAATGGATCCCA...GAGTTCACAGAAATGGATCCCACTTATTCTCCCGCAGCCCTGCCCCAGAGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
CDS-3UTR TCA 90 bp CATACATTAGAACACCCAAACTCCACCAGTCAACTGCCTTGTCATGTCCTGAATGGAGTCTTCAGGGGCTaGTTATCCGGTGGCTTTAGC +
Preference number: 4 (lower is better)
Translates to: HTLEHPNSTSQLPCHVLNGVFRG*LSGGFS
Trigger: GCTAAAGCCACCGGATAATCAGCCCCTGAAGACTCC...ATTCAGGACATGACAAGGCAGTTGACTGGTGGAGTTTGGGTGTTCTAATGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR TCA 90 bp CTGTGCACCACTCCAACATCATGCATGTGGCTTACAGCTGAAACAAGCTTCCTCACATTGTGTACAAAATaGCGCCCAAGCTCCACAGGT +
Preference number: 4 (lower is better)
Translates to: LCTTPTSCMWLTAETSFLTLCTK*RPSSTG
Trigger: ACCTGTGGAGCTTGGGCGTCATTTTGTACACAATGT...GAGGAAGCTTGTTTCAGCTGTAAGCCACATGCATGATGTTGGAGTGGTGCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR TCA 90 bp CAGGGCTGCGGGAGAATAAGTGGGATCCATTTCTGTGAACTCTTCTGCAAAGTTGGATTGGAGGACAGCTaGCTTCCATCTTGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: QGCGRISGIHFCELFCKVGLEDS*LPSCSH
Trigger: ATGGCTACAAGATGGAAGTCAGCTGTCCTCCAATCC...AACTTTGCAGAAGAGTTCACAGAAATGGATCCCACTTATTCTCCCGCAGCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR TCA 90 bp TCTTTCCTCTGGGATCCCGTCAGCTTCTCCTTCCCCAGAGGTCCTGACATTGCTTTCTTCCTGTTAGTCTaGCTGCCTTTTTACCCATTT +
Preference number: 4 (lower is better)
Translates to: SFLWDPVSFSFPRGPDIAFFLLV*LPFYPF
Trigger: AAATGGGTAAAAAGGCAGTCAGACTAACAGGAAGAA...AGCAATGTCAGGACCTCTGGGGAAGGAGAAGCTGACGGGATCCCAGAGGAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp AGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACTGATACAAGTGGTGGTTATGTATaGGGACTGACTGGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: RSPQAYAEGIKVQWITDTSGGYV*GLTGSL
Trigger: GAGGCTCCCAGTCAGTCCTCATACATAACCACCACT...TGTATCAGTGATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp AGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACTGATACAGCAAAAAGCAGCAGATaGGAGGCTAACGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: RSPQAYAEGIKVQWITDTAKSSR*EANELS
Trigger: GCTCAGCTCGTTAGCCTCTCATCTGCTGCTTTTTGC...TGTATCAGTGATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp TCAAAAGACGCTGAATTAGGTCTTTCGCTAAAGCACTCATTTCTTGGGGATATGGCAGTCCGCAGCTCGTaGTTGACAGTGAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SKDAELGLSLKHSFLGDMAVRSS*LTVRSC
Trigger: GCAGCTCCTCACTGTCAAGCACGAGCTGCGGACTGC...CATATCCCCAAGAAATGAGTGCTTTAGCGAAAGACCTAATTCAGCGTCTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554206.1
ENST00000648062.1
CDS-3UTR GCA 90 bp AACTGGAAGAGGGTCTCCGGGTTATTGCTGTCGGCAGGATTGCTGGGCTGCAGTTCTGACAATATCTGGTaGCATGTATTCAATAGTTCC +
Preference number: 4 (lower is better)
Translates to: NWKRVSGLLLSAGLLGCSSDNIW*HVFNSS
Trigger: GGAACTATTGAATACATGGCACCAGATATTGTCAGA...ACTGCAGCCCAGCAATCCTGCCGACAGCAATAACCCGGAGACCCTCTTCCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR GCA 90 bp AGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACTGATACAGCTTTCACACAGGTATaGACGGCAGCTCCGGAAGAT +
Preference number: 4 (lower is better)
Translates to: RSPQAYAEGIKVQWITDTAFTQV*TAAPED
Trigger: ATCTTCCGGAGCTGCCGTGCATACCTGTGTGAAAGC...TGTATCAGTGATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR GCA 90 bp AAGCATAAAAGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCTTCACGCCATTCTCCTaGCTCAGCCTCCCAAGTACC +
Preference number: 4 (lower is better)
Translates to: KHKRSPQAYAEGIKVQWIFTPFS*LSLPST
Trigger: GGTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAA...GATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCTTTTATGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp GGGCAGGGCTGCGGGAGAATAAGTGGGATCCATTTCTGTGAACTCTTCTGCAAATTCATCTCGAATGACTaGCTTAAATGGTGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: GQGCGRISGIHFCELFCKFISND*LKWCRH
Trigger: GTGCCTGCACCATTTAAGCCAGTCATTCGAGATGAA...TTTGCAGAAGAGTTCACAGAAATGGATCCCACTTATTCTCCCGCAGCCCTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CCA 90 bp TTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCGTCTCTTTCCCGCTCTaGCCGCACGGCTCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: LLKRVICALFTVTFSVQCVSFPL*PHGSLL
Trigger: GAGGAGCGAGCCGTGCGGCCAGAGCGGGAAAGAGAC...GCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTTAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp TCACTATCTATATGTAGTTTTAGTGCTCCATTTGGACTGGTCTCTGGCCACTGGCAGGCTGGAGTGCAATaGTGCGATCTAGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: SLSICSFSAPFGLVSGHWQAGVQ*CDLGSL
Trigger: CAGTGAGCCTAGATCGCACCATTGCACTCCAGCCTG...CCAGTGGCCAGAGACCAGTCCAAATGGAGCACTAAAACTACATATAGATAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp AAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATAGCCTCCCAAGTAGCTaGGCCCACAGGCACCCACCA +
Preference number: 4 (lower is better)
Translates to: KAKQKVSSQYESFLVGRHSLPSS*AHRHPP
Trigger: TGGTGGGTGCCTGTGGGCCCAGCTACTTGGGAGGCT...ATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp GGAACTCTCACTGGAACTGCTGCGCGTCTCGGTACTGGTGCTAGTCTTTTTCATTTTCTCCATCAACAGTaGAAGGAGATGCTCCAGTTA +
Preference number: 4 (lower is better)
Translates to: GTLTGTAARLGTGASLFHFLHQQ*KEMLQL
Trigger: TAACTGGAGCATCTCCTTTCACTGTTGATGGAGAAA...ATGAAAAAGACTAGCACCAGTACCGAGACGCGCAGCAGTTCCAGTGAGAGTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR TCA 90 bp GAGCAACAAAGGAATAGCCCTGAAACAGCTTCTCAGAACTCTGGGGCAGGGCTGACACTTTCGACAAATTaGAAAACTACCTTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: EQQRNSPETASQNSGAGLTLSTN*KTTFSQ
Trigger: CTGGGAGAAGGTAGTTTTTCAATTTGTCGAAAGTGT...CAGCCCTGCCCCAGAGTTCTGAGAAGCTGTTTCAGGGCTATTCCTTTGTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR TCA 90 bp AGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACTGATACAGGTGCAATGGATCACTaGTACACTCCTACCATGCCT +
Preference number: 4 (lower is better)
Translates to: RSPQAYAEGIKVQWITDTGAMDH*YTPTMP
Trigger: AGGCATGGTAGGAGTGTATCAGTGATCCATTGCACC...TGTATCAGTGATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR TCA 90 bp TCTTTCCTCTGGGATCCCGTCAGCTTCTCCTTCCCCAGAGGTCCTGACATTGCTTTCTGGATGTGTATATaGGCAGGGTTTGATTATTCT +
Preference number: 4 (lower is better)
Translates to: SFLWDPVSFSFPRGPDIAFWMCI*AGFDYS
Trigger: AGAATAATCAAACCCTGCTCATATACACATCCAGAA...AGCAATGTCAGGACCTCTGGGGAAGGAGAAGCTGACGGGATCCCAGAGGAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp GATGAATTAGCTACTGCTTATCAGGCAACTAACAGAGCCGGCAACAGAAAGGTTCAAAGGGAGGCTGAGTaGTTTGCTCAGGGTCACCAA +
Preference number: 4 (lower is better)
Translates to: DELATAYQATNRAGNRKVQREAE*FAQGHQ
Trigger: TTGGTGACCCTGAGCAAATCACTCAGCCTCCCTTTG...AACCTTTCTGTTGCCGGCTCTGTTAGTTGCCTGATAAGCAGTAGCTAATTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp GAAAACAGACCCCTTTCTCTGATAAATCATTGTTTGAAGGGTGCAAATTTCAAAGGTGGCAGGATCGCTTaGGCCCAGCCTGGGCAACAC +
Preference number: 4 (lower is better)
Translates to: ENRPLSLINHCLKGANFKGGRIA*AQPGQH
Trigger: GTGTTGCCCAGGCTGGGCTCAAGCGATCCTGCCACC...TTTGAAATTTGCACCCTTCAAACAATGATTTATCAGAGAAAGGGGTCTGTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp GGAACTCTCACTGGAACTGCTGCGCGTCTCGGTACTGGTGCTAGTCTTTTTCATTTCTTTGATTTCATCTaGATCACGTGGACCACATCC +
Preference number: 4 (lower is better)
Translates to: GTLTGTAARLGTGASLFHFFDFI*ITWTTS
Trigger: GGATGTGGTCCACGTGATGCAGATGAAATCAAAGAA...ATGAAAAAGACTAGCACCAGTACCGAGACGCGCAGCAGTTCCAGTGAGAGTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR GCA 90 bp AGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACTGATACAGGTTTCAGATCCCTGTaGACCACTCCAACATCATGC +
Preference number: 4 (lower is better)
Translates to: RSPQAYAEGIKVQWITDTGFRSL*TTPTSC
Trigger: GCATGATGTTGGAGTGGTGCACAGGGATCTGAAACC...TGTATCAGTGATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR GCA 90 bp AAGAGATGTTCTTTGATTTCATCTGCATCACGTGGACCACATCCCAATCTCTTCAACTCTCACTGGAACTaGTGCGCGTCTCGGTACTGG +
Preference number: 4 (lower is better)
Translates to: KRCSLISSASRGPHPNLFNSHWN*CASRYW
Trigger: CCAGTACCGAGACGCGCAGCAGTTCCAGTGAGAGTT...GAAGAGATTGGGATGTGGTCCACGTGATGCAGATGAAATCAAAGAACATCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR GCA 90 bp AGATGTTCTTTGATTTCATCTGCATCACGTGGACCACATCCCAATCTCTTCTTGGCAGGATTGCTGGGCTaGAGTGTCTTGGTGGGTGTA +
Preference number: 4 (lower is better)
Translates to: RCSLISSASRGPHPNLFLAGLLG*SVLVGV
Trigger: TACACCCACCAAGACACTGCAGCCCAGCAATCCTGC...CAAGAAGAGATTGGGATGTGGTCCACGTGATGCAGATGAAATCAAAGAACATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR GCA 90 bp CAAGCCAGACATTTTAAGCCTTTTGTTTGGATCTACTGTGAGAAGTCCTTGGATGGGTCTCCGGGTTATTaGTGTCGGCAGGATTGCTGG +
Preference number: 4 (lower is better)
Translates to: QARHFKPFVWIYCEKSLDGSPGY*CRQDCW
Trigger: CCAGCAATCCTGCCGACAGCAATAACCCGGAGACCC...ATCCAAGGACTTCTCACAGTAGATCCAAACAAAAGGCTTAAAATGTCTGGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR GCA 90 bp CGAGCTGAGCAGCTCTTAGTACTGAGGAGGGAAAGGTTGGAATTCAAGGTCACCCTACATGACACAACATaGCCCATTCTACTTGTTGCA +
Preference number: 4 (lower is better)
Translates to: RAEQLLVLRRERLEFKVTLHDTT*PILLVA
Trigger: TGCAACAAGTAGAATGGGGCATGTTGTGTCATGTAG...GGTGACCTTGAATTCCAACCTTTCCCTCCTCAGTACTAAGAGCTGCTCAGCTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp AAGCATAAAAGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCCTGAGGTACAAGGATTaGTTGAGCCCAGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: KHKRSPQAYAEGIKVQWILRYKD*LSPGGG
Trigger: TCCACCTCCTGGGCTCAAGCAATCCTTGTACCTCAG...GATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCTTTTATGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp TATTTGTTAAAGGCGTGGAAGGTTGCTTTCACACAGGTATGCACGGCAGCTCCGCCAACATCATGCATGTaGCTTACAGCTGAAACAAGC +
Preference number: 4 (lower is better)
Translates to: YLLKAWKVAFTQVCTAAPPTSCM*LTAETS
Trigger: GCTTGTTTCAGCTGTAAGCCACATGCATGATGTTGG...CGGAGCTGCCGTGCATACCTGTGTGAAAGCAACCTTCCACGCCTTTAACAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CCA 90 bp TCATCATTGCACTCCTGGCAACATTTGTCACTCCAGGACGTTCAACTCCCATGTATGAAGGGTGAAGCATaGAGTCTTCAGGGGCTGATT +
Preference number: 4 (lower is better)
Translates to: SSLHSWQHLSLQDVQLPCMKGEA*SLQGLI
Trigger: AATCAGCCCCTGAAGACTCCATGCTTCACCCTTCAT...ACATGGGAGTTGAACGTCCTGGAGTGACAAATGTTGCCAGGAGTGCAATGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CCA 90 bp TACCTTCTCCCAGGGGTTTGTCCTTCAAATCTAGGTCATAGTGTTGATAGAATGAATGGGAACTCTCACTaGAACTGCTGCGCGTCTCGG +
Preference number: 4 (lower is better)
Translates to: YLLPGVCPSNLGHSVDRMNGNSH*NCCASR
Trigger: CCGAGACGCGCAGCAGTTCCAGTGAGAGTTCCCATT...CATTCTATCAACACTATGACCTAGATTTGAAGGACAAACCCCTGGGAGAAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CCA 90 bp CCATCAACAGTGAAAGGAGATGCTCCAGTTAGTAATTCATACATTAGAACACCCTGTCGGCAGGATTGCTaGGCTGCAGTGTCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: PSTVKGDAPVSNSYIRTPCRQDC*AAVSWW
Trigger: CCACCAAGACACTGCAGCCCAGCAATCCTGCCGACA...GGGTGTTCTAATGTATGAATTACTAACTGGAGCATCTCCTTTCACTGTTGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CCA 90 bp AACTCTTCTGCAAAGTTACTCACATCTAATTCATCTCGAATGACTGGCTTAAATGTCTCTTTCCCGCTCTaGCCGCACGGCTCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: NSSAKLLTSNSSRMTGLNVSFPL*PHGSLL
Trigger: GAGGAGCGAGCCGTGCGGCCAGAGCGGGAAAGAGAC...ATTTAAGCCAGTCATTCGAGATGAATTAGATGTGAGTAACTTTGCAGAAGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554206.1
ENST00000648062.1
CDS-3UTR CCA 90 bp CGAGCTGAGCAGCTCTTAGTACTGAGGAGGGAAAGGTTGGAATTCAAGGTCACCTTGGTCTCTAACTCCTaGTTTCAAGTGATTCTCCAG +
Preference number: 4 (lower is better)
Translates to: RAEQLLVLRRERLEFKVTLVSNS*FQVILQ
Trigger: CTGGAGAATCACTTGAAACCAGGAGTTAGAGACCAA...GGTGACCTTGAATTCCAACCTTTCCCTCCTCAGTACTAAGAGCTGCTCAGCTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp AAGCATAAAAGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCCAATCTGGAGTGCAATaGTGCGACCTTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: KHKRSPQAYAEGIKVQWIQSGVQ*CDLGSL
Trigger: CAGTGAGCCAAGGTCGCACCATTGCACTCCAGATTG...GATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCTTTTATGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp CGAGCTGAGCAGCTCTTAGTACTGAGGAGGGAAAGGTTGGAATTCAAGGTCACCAGGCTTTATCTTTCATaGCTCAGTTCTCACAAGAGG +
Preference number: 4 (lower is better)
Translates to: RAEQLLVLRRERLEFKVTRLYLS*LSSHKR
Trigger: CCTCTTGTGAGAACTGAGCCATGAAAGATAAAGCCT...GGTGACCTTGAATTCCAACCTTTCCCTCCTCAGTACTAAGAGCTGCTCAGCTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp TCTTTCCTCTGGGATCCCGTCAGCTTCTCCTTCCCCAGAGGTCCTGACATTGCTAAATATCATTCCCTCTaGGGGGAATTAATGCTAGAT +
Preference number: 4 (lower is better)
Translates to: SFLWDPVSFSFPRGPDIAKYHSL*GELMLD
Trigger: ATCTAGCATTAATTCCCCCCAGAGGGAATGATATTT...AGCAATGTCAGGACCTCTGGGGAAGGAGAAGCTGACGGGATCCCAGAGGAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp CCTGGCAACATTTGTCACTCCAGGACGTTCAACTCCCATGTGAAACTGAAGAGGTTTCTCCATCAACAGTaGAAGGAGATGCTCCAGTTA +
Preference number: 4 (lower is better)
Translates to: PGNICHSRTFNSHVKLKRFLHQQ*KEMLQL
Trigger: TAACTGGAGCATCTCCTTTCACTGTTGATGGAGAAA...CCTCTTCAGTTTCACATGGGAGTTGAACGTCCTGGAGTGACAAATGTTGCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR TCA 90 bp GAGGATTGGAGGACAGCTGACTTCCATCTTGTAGCCATTCATTGTACCTCAAGCCATGTGGCTTACAGCTaGAACAAGCTTCCTCATGAT +
Preference number: 4 (lower is better)
Translates to: EDWRTADFHLVAIHCTSSHVAYS*NKLPHD
Trigger: ATCATGAGGAAGCTTGTTTCAGCTGTAAGCCACATG...GCTTGAGGTACAATGAATGGCTACAAGATGGAAGTCAGCTGTCCTCCAATCCTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR TCA 90 bp AGAGGGTCTATGACAGCTGCATTACGCTTGAATAGGATGGAAGGAGCAACAAAGGTCAAACTTCGGTCATaGGATTGGAAGGGAACCTGT +
Preference number: 4 (lower is better)
Translates to: RGSMTAALRLNRMEGATKVKLRS*DWKGTC
Trigger: ACAGGTTCCCTTCCAATCTCATGACCGAAGTTTGAC...CTTTGTTGCTCCTTCCATCCTATTCAAGCGTAATGCAGCTGTCATAGACCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR TCA 90 bp AGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACTGATACAGTCAAACTTCGGTCATaGGATTGGAAGGGAACCTGT +
Preference number: 4 (lower is better)
Translates to: RSPQAYAEGIKVQWITDTVKLRS*DWKGTC
Trigger: ACAGGTTCCCTTCCAATCTCATGACCGAAGTTTGAC...TGTATCAGTGATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR TCA 90 bp TCACTATCTATATGTAGTTTTAGTGCTCCATTTGGACTGGTCTCTGGCCACTGGGGTGCAATGGATCACTaGTACACTCCTACCATGCCT +
Preference number: 4 (lower is better)
Translates to: SLSICSFSAPFGLVSGHWGAMDH*YTPTMP
Trigger: AGGCATGGTAGGAGTGTATCAGTGATCCATTGCACC...CCAGTGGCCAGAGACCAGTCCAAATGGAGCACTAAAACTACATATAGATAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp AAGCATAAAAGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCGAATGTCAACAACAGTaGCAGAGGTCAGAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: KHKRSPQAYAEGIKVQWIECQQQ*QRSEWW
Trigger: CCACCACTCTGACCTCTGTCACTGTTGTTGACATTC...GATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCTTTTATGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp AGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACTGATACATCCTGTGCAACAAGGTaGGACTTCAAGAAATCCAGC +
Preference number: 4 (lower is better)
Translates to: RSPQAYAEGIKVQWITDTSCATR*DFKKSS
Trigger: GCTGGATTTCTTGAAGTCTCACCTTGTTGCACAGGA...TGTATCAGTGATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp GAAAACAGACCCCTTTCTCTGATAAATCATTGTTTGAAGGGTGCAAATTTCAAAACTCCTGACCTCACGTaGTCCACCCGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: ENRPLSLINHCLKGANFKTPDLT*STRLGL
Trigger: GAGGCCAAGGCGGGTGGATCACGTGAGGTCAGGAGT...TTTGAAATTTGCACCCTTCAAACAATGATTTATCAGAGAAAGGGGTCTGTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp CGAGCTGAGCAGCTCTTAGTACTGAGGAGGGAAAGGTTGGAATTCAAGGTCACCAGTCGATTTAAGGAGTaGGGGGCAGTCTTATTAATT +
Preference number: 4 (lower is better)
Translates to: RAEQLLVLRRERLEFKVTSRFKE*GAVLLI
Trigger: AATTAATAAGACTGCCCCTCACTCCTTAAATCGACT...GGTGACCTTGAATTCCAACCTTTCCCTCCTCAGTACTAAGAGCTGCTCAGCTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp AACTCTTCTGCAAAGTTACTCACATCTAATTCATCTCGAATGACTGGCTTAAATTTGACAGTGAGGAGCTaGTCTCCTCCGTCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: NSSAKLLTSNSSRMTGLNLTVRS*SPPSPP
Trigger: CGGCGGCGACGGAGGAGAGCAGCTCCTCACTGTCAA...ATTTAAGCCAGTCATTCGAGATGAATTAGATGTGAGTAACTTTGCAGAAGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554206.1
ENST00000648062.1
CDS-3UTR GCA 90 bp CTGTGCACCACTCCAACATCATGCATGTGGCTTACAGCTGAAACAAGCTTCCTCTTCTTTGATTTCATCTaGATCACGTGGACCACATCC +
Preference number: 4 (lower is better)
Translates to: LCTTPTSCMWLTAETSFLFFDFI*ITWTTS
Trigger: GGATGTGGTCCACGTGATGCAGATGAAATCAAAGAA...GAGGAAGCTTGTTTCAGCTGTAAGCCACATGCATGATGTTGGAGTGGTGCACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR GCA 90 bp TATTTGTTAAAGGCGTGGAAGGTTGCTTTCACACAGGTATGCACGGCAGCTCCGTCCGTCTCACTGAAGTaGTTCTTTTTCTTAATGCGC +
Preference number: 4 (lower is better)
Translates to: YLLKAWKVAFTQVCTAAPSVSLK*FFFLMR
Trigger: GCGCATTAAGAAAAAGAAGCACTTCAGTGAGACGGA...CGGAGCTGCCGTGCATACCTGTGTGAAAGCAACCTTCCACGCCTTTAACAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR GCA 90 bp AAGCATAAAAGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCGGTTTCAGATCCCTGTaGACCACTCCAACATCATGC +
Preference number: 4 (lower is better)
Translates to: KHKRSPQAYAEGIKVQWIGFRSL*TTPTSC
Trigger: GCATGATGTTGGAGTGGTGCACAGGGATCTGAAACC...GATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCTTTTATGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR GCA 90 bp CATACATTAGAACACCCAAACTCCACCAGTCAACTGCCTTGTCATGTCCTGAATGGTTTCAGATCCCTGTaGACCACTCCAACATCATGC +
Preference number: 4 (lower is better)
Translates to: HTLEHPNSTSQLPCHVLNGFRSL*TTPTSC
Trigger: GCATGATGTTGGAGTGGTGCACAGGGATCTGAAACC...ATTCAGGACATGACAAGGCAGTTGACTGGTGGAGTTTGGGTGTTCTAATGTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR GCA 90 bp TCAGGGGCTGATTATCCGGTGGCTTTAGCCGTGCAAATCCAAAATCAATTATTTGCTTTCACACAGGTATaGACGGCAGCTCCGGAAGAT +
Preference number: 4 (lower is better)
Translates to: SGADYPVALAVQIQNQLFAFTQV*TAAPED
Trigger: ATCTTCCGGAGCTGCCGTGCATACCTGTGTGAAAGC...AAATAATTGATTTTGGATTTGCACGGCTAAAGCCACCGGATAATCAGCCCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR GCA 90 bp AGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACTGATACAAAAGGCGTGGAAGGTTaGTTTCACACAGGTATGCAC +
Preference number: 4 (lower is better)
Translates to: RSPQAYAEGIKVQWITDTKGVEG*FHTGMH
Trigger: GTGCATACCTGTGTGAAAGCAACCTTCCACGCCTTT...TGTATCAGTGATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR GCA 90 bp AGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATCTGGAAATCTCACTGGAACTGCTaGGCGTCTCGGTACTGGTGC +
Preference number: 4 (lower is better)
Translates to: SKRYHHSMSHFLLADIWKSHWNC*ASRYWC
Trigger: GCACCAGTACCGAGACGCGCAGCAGTTCCAGTGAGA...TTTCCAGATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR GCA 90 bp ACCCACATTGTCCACAAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTGCAGGATTGCTGGGCTaGAGTGTCTTGGTGGGTGTA +
Preference number: 4 (lower is better)
Translates to: THIVHKAKQKVSSQYESFAGLLG*SVLVGV
Trigger: TACACCCACCAAGACACTGCAGCCCAGCAATCCTGC...AAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTTGTGGACAATGTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR GCA 90 bp TTGTTTGAAGGGTGCAAATTTCAAAAACCCACATTGTCCACAAGGCAAAGCAAAAGTGAGCCAAGATCGTaGCACTGCACTGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: LFEGCKFQKPTLSTRQSKSEPRS*HCTAAW
Trigger: CCAGGCTGCAGTGCAGTGGCACGATCTTGGCTCACT...TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAATTTGCACCCTTCAAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp TCACTATCTATATGTAGTTTTAGTGCTCCATTTGGACTGGTCTCTGGCCACTGGCTAGGATTACAGGCATaGACTACCACTCCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: SLSICSFSAPFGLVSGHWLGLQA*TTTPGS
Trigger: TGAGCCAGGAGTGGTAGTGCATGCCTGTAATCCTAG...CCAGTGGCCAGAGACCAGTCCAAATGGAGCACTAAAACTACATATAGATAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp CGAGCTGAGCAGCTCTTAGTACTGAGGAGGGAAAGGTTGGAATTCAAGGTCACCGAGAACTTGACGAGCTaGAATAAAATAGCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: RAEQLLVLRRERLEFKVTENLTS*NKIAER
Trigger: CCTTTCAGCTATTTTATTGCAGCTCGTCAAGTTCTC...GGTGACCTTGAATTCCAACCTTTCCCTCCTCAGTACTAAGAGCTGCTCAGCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp AGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACTGATACAATACCAAGCCACAGGTaGTCAAGATGGCGAATCTGT +
Preference number: 4 (lower is better)
Translates to: RSPQAYAEGIKVQWITDTIPSHR*SRWRIC
Trigger: ACAGATTCGCCATCTTGAGCACCTGTGGCTTGGTAT...TGTATCAGTGATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp TTGTTTGAAGGGTGCAAATTTCAAAAACCCACATTGTCCACAAGGCAAAGCAAAAGGCATGAACCACCGTaGCCGGCCTGGGAGAAACAT +
Preference number: 4 (lower is better)
Translates to: LFEGCKFQKPTLSTRQSKRHEPP*PAWEKH
Trigger: ATGTTTCTCCCAGGCCGGGCACGGTGGTTCATGCCT...TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAATTTGCACCCTTCAAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp AGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATCTGGAAATACGGTGACCTGGACTaGAGCAAGATCGGGCACAGC +
Preference number: 4 (lower is better)
Translates to: SKRYHHSMSHFLLADIWKYGDLD*SKIGHS
Trigger: GCTGTGCCCGATCTTGCTGCAGTCCAGGTCACCGTA...TTTCCAGATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp AGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACTGATACAATAATCCCCAACTTGTaGAGATGTTCGAGGGCAAGC +
Preference number: 4 (lower is better)
Translates to: RSPQAYAEGIKVQWITDTIIPNL*RCSRAS
Trigger: GCTTGCCCTCGAACATCTCCACAAGTTGGGGATTAT...TGTATCAGTGATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp TATTTGTTAAAGGCGTGGAAGGTTGCTTTCACACAGGTATGCACGGCAGCTCCGTCTGTCAGCACCACATaGCCATTAGAATCAAGTAGA +
Preference number: 4 (lower is better)
Translates to: YLLKAWKVAFTQVCTAAPSVSTT*PLESSR
Trigger: TCTACTTGATTCTAATGGCCATGTGGTGCTGACAGA...CGGAGCTGCCGTGCATACCTGTGTGAAAGCAACCTTCCACGCCTTTAACAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CCA 90 bp CAGGGCTGCGGGAGAATAAGTGGGATCCATTTCTGTGAACTCTTCTGCAAAGTTTTCATCTGCATCACGTaGACCACATCCCAATCTCTT +
Preference number: 4 (lower is better)
Translates to: QGCGRISGIHFCELFCKVFICIT*TTSQSL
Trigger: AAGAGATTGGGATGTGGTCCACGTGATGCAGATGAA...AACTTTGCAGAAGAGTTCACAGAAATGGATCCCACTTATTCTCCCGCAGCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CCA 90 bp CCTGGCAACATTTGTCACTCCAGGACGTTCAACTCCCATGTGAAACTGAAGAGGGCAACTTCACAATATTaGGGTGTCCTTCACAGAGTT +
Preference number: 4 (lower is better)
Translates to: PGNICHSRTFNSHVKLKRATSQY*GVLHRV
Trigger: AACTCTGTGAAGGACACCCCAATATTGTGAAGTTGC...CCTCTTCAGTTTCACATGGGAGTTGAACGTCCTGGAGTGACAAATGTTGCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CCA 90 bp GAGGATTGGAGGACAGCTGACTTCCATCTTGTAGCCATTCATTGTACCTCAAGCCCAACATCATGCATGTaGCTTACAGCTGAAACAAGC +
Preference number: 4 (lower is better)
Translates to: EDWRTADFHLVAIHCTSSPTSCM*LTAETS
Trigger: GCTTGTTTCAGCTGTAAGCCACATGCATGATGTTGG...GCTTGAGGTACAATGAATGGCTACAAGATGGAAGTCAGCTGTCCTCCAATCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CCA 90 bp CATGACACAACATGCCCCATTCTACTTGTTGCATACAAAGTAGAAGAGGAATGTAATGGGAACTCTCACTaGAACTGCTGCGCGTCTCGG +
Preference number: 4 (lower is better)
Translates to: HDTTCPILLVAYKVEEECNGNSH*NCCASR
Trigger: CCGAGACGCGCAGCAGTTCCAGTGAGAGTTCCCATT...ACATTCCTCTTCTACTTTGTATGCAACAAGTAGAATGGGGCATGTTGTGTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp AGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATCTGGAAATGTCGGCAGGATTGCTaGGCTGCAGTGTCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: SKRYHHSMSHFLLADIWKCRQDC*AAVSWW
Trigger: CCACCAAGACACTGCAGCCCAGCAATCCTGCCGACA...TTTCCAGATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp TCACTATCTATATGTAGTTTTAGTGCTCCATTTGGACTGGTCTCTGGCCACTGGCTGGTCTCCAACTCCTaGGCTAAAGCAATCCTTCCT +
Preference number: 4 (lower is better)
Translates to: SLSICSFSAPFGLVSGHWLVSNS*AKAILP
Trigger: AGGAAGGATTGCTTTAGCCCAGGAGTTGGAGACCAG...CCAGTGGCCAGAGACCAGTCCAAATGGAGCACTAAAACTACATATAGATAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp AAGCATAAAAGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCAGCCTCTCAAGTAGCTaGGATTACAGGCATGCGCTA +
Preference number: 4 (lower is better)
Translates to: KHKRSPQAYAEGIKVQWISLSSS*DYRHAL
Trigger: TAGCGCATGCCTGTAATCCCAGCTACTTGAGAGGCT...GATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCTTTTATGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR CAA 72 bp ATGGAGAGTCCTTCATCATTGCACTCCTGGCAACATTaGTCACTCCAGGACGTTCAACTCCCATGTGAAACT +
Preference number: 4 (lower is better)
Translates to: MESPSSLHSWQH*SLQDVQLPCET
Trigger: AGTTTCACATGGGAGTTGAACGTCCTGGAGTGACAAATGTTGCCAGGAGTGCAATGATGAAGGACTCTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR TCA 90 bp AAGCATAAAAGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCGCACCTCATGCTCTGTaGAACGCTCTCTTTGAGAAA +
Preference number: 4 (lower is better)
Translates to: KHKRSPQAYAEGIKVQWIAPHAL*NALFEK
Trigger: TTTCTCAAAGAGAGCGTTTCACAGAGCATGAGGTGC...GATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCTTTTATGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR TCA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATCTGAATCTCCCCCTCTaGCAATATCTGGTGCCATGT +
Preference number: 4 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNLNLPL*QYLVPC
Trigger: ACATGGCACCAGATATTGTCAGAGGGGGAGATTCAG...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR TCA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATTGCCTTGTCATGTCCTaGATCTCCCCCTCTGACAAT +
Preference number: 4 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNCLVMS*ISPSDN
Trigger: ATTGTCAGAGGGGGAGATTCAGGACATGACAAGGCA...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR TCA 90 bp AGGACAGCTGACTTCCATCTTGTAGCCATTCATTGTACCTCAAGCCAGACATTTAAACAAGCTTCCTCATaGTGTAGCTGGCTTCCGTCT +
Preference number: 4 (lower is better)
Translates to: RTADFHLVAIHCTSSQTFKQASS*CSWLPS
Trigger: AGACGGAAGCCAGCTACATCATGAGGAAGCTTGTTT...AAATGTCTGGCTTGAGGTACAATGAATGGCTACAAGATGGAAGTCAGCTGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR TCA 90 bp ACCCACATTGTCCACAAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTCGGCATAATGAAGGGTaGAGCATGGAGTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: THIVHKAKQKVSSQYESFRHNEG*SMESSG
Trigger: CCCTGAAGACTCCATGCTTCACCCTTCATTATGCCG...AAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTTGTGGACAATGTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR TCA 90 bp GATGAATTAGCTACTGCTTATCAGGCAACTAACAGAGCCGGCAACAGAAAGGTTACATTGTGTACAAAATaGCGCCCAAGCTCCACAGGT +
Preference number: 4 (lower is better)
Translates to: DELATAYQATNRAGNRKVTLCTK*RPSSTG
Trigger: ACCTGTGGAGCTTGGGCGTCATTTTGTACACAATGT...AACCTTTCTGTTGCCGGCTCTGTTAGTTGCCTGATAAGCAGTAGCTAATTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp TTCAACTCCCATGTGAAACTGAAGAGGGTCTATGACAGCTGCATTACGCTTGAAGTCAAACTTCGGTCATaGGATTGGAAGGGAACCTGT +
Preference number: 4 (lower is better)
Translates to: FNSHVKLKRVYDSCITLEVKLRS*DWKGTC
Trigger: ACAGGTTCCCTTCCAATCTCATGACCGAAGTTTGAC...TTCAAGCGTAATGCAGCTGTCATAGACCCTCTTCAGTTTCACATGGGAGTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR TCA 90 bp GATGAATTAGCTACTGCTTATCAGGCAACTAACAGAGCCGGCAACAGAAAGGTTGCCTTATCAACATTCTaGAGGCAAAACCCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: DELATAYQATNRAGNRKVALSTF*RQNPSL
Trigger: GAGAGAGGGGTTTTGCCTTCAGAATGTTGATAAGGC...AACCTTTCTGTTGCCGGCTCTGTTAGTTGCCTGATAAGCAGTAGCTAATTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp AAGCATAAAAGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCTGGTGCATAAGTGGCTaGCTACATGACACAACATGC +
Preference number: 4 (lower is better)
Translates to: KHKRSPQAYAEGIKVQWIWCISG*LHDTTC
Trigger: GCATGTTGTGTCATGTAGTCAGCCACTTATGCACCA...GATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCTTTTATGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614987.5
ENST00000648062.1
CDS-3UTR TCA 90 bp TTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCCCTCCCGGGTTAAAGTaGTTCTCCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LLKRVICALFTVTFSVQCPPGLK*FSCLSL
Trigger: GAGGCTGAGGCAGGAGAATCACTTTAACCCGGGAGG...GCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTTAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp AGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACTGATACAAGGCCAAGGCAGACATaGATGACAGGCTTTATCTTT +
Preference number: 4 (lower is better)
Translates to: RSPQAYAEGIKVQWITDTRPRQT*MTGFIF
Trigger: AAAGATAAAGCCTGTCATTCATGTCTGCCTTGGCCT...TGTATCAGTGATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp AAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCTTTTGGATCTCCTGACCTCGTaGTCCACCCTCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: KKSNMCSIHSNILCPVLLDLLTS*STLLSL
Trigger: GAGGCTGAGGAGGGTGGATCACGAGGTCAGGAGATC...CAAAAGCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp AAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATATGGTCTTGATCTCCTaGCCTCGTGATCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: KAKQKVSSQYESFLVGRHMVLIS*PRDPPS
Trigger: GGAGGGTGGATCACGAGGTCAGGAGATCAAGACCAT...ATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp AGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACTGATACACGTTCTGTCCTTGTATaGTCTGTGGTTTTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: RSPQAYAEGIKVQWITDTRSVLV*SVVLAF
Trigger: AAAGGCCAAAACCACAGAGCATACAAGGACAGAACG...TGTATCAGTGATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR GCA 90 bp GACGCTGAATTAGGTCTTTCGCTAAAGCACTCATTTCTTGGGGATATGGAGGCTACCACTCCAACATCATaGATGTGGCTTACAGCTGAA +
Preference number: 4 (lower is better)
Translates to: DAELGLSLKHSFLGDMEATTPTS*MWLTAE
Trigger: TTCAGCTGTAAGCCACATGCATGATGTTGGAGTGGT...AGCCTCCATATCCCCAAGAAATGAGTGCTTTAGCGAAAGACCTAATTCAGCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR GCA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATGGTTTCAGATCCCTGTaGACCACTCCAACATCATGC +
Preference number: 4 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNGFRSL*TTPTSC
Trigger: GCATGATGTTGGAGTGGTGCACAGGGATCTGAAACC...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR GCA 90 bp CCATCAACAGTGAAAGGAGATGCTCCAGTTAGTAATTCATACATTAGAACACCCGCTTTCACACAGGTATaGACGGCAGCTCCGGAAGAT +
Preference number: 4 (lower is better)
Translates to: PSTVKGDAPVSNSYIRTPAFTQV*TAAPED
Trigger: ATCTTCCGGAGCTGCCGTGCATACCTGTGTGAAAGC...GGGTGTTCTAATGTATGAATTACTAACTGGAGCATCTCCTTTCACTGTTGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR GCA 90 bp AAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATAACTCTCACTGGAACTaGTGCGCGTCTCGGTACTGG +
Preference number: 4 (lower is better)
Translates to: KAKQKVSSQYESFLVGRHNSHWN*CASRYW
Trigger: CCAGTACCGAGACGCGCAGCAGTTCCAGTGAGAGTT...ATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR GCA 90 bp TTGTTTGAAGGGTGCAAATTTCAAAAACCCACATTGTCCACAAGGCAAAGCAAAGCAGGATTGCTGGGCTaGAGTGTCTTGGTGGGTGTA +
Preference number: 4 (lower is better)
Translates to: LFEGCKFQKPTLSTRQSKAGLLG*SVLVGV
Trigger: TACACCCACCAAGACACTGCAGCCCAGCAATCCTGC...TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAATTTGCACCCTTCAAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR GCA 90 bp AGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACTGATACAACACATAGCTTAGCATaGATCTCAGATGGATCCCGA +
Preference number: 4 (lower is better)
Translates to: RSPQAYAEGIKVQWITDTTHSLA*ISDGSR
Trigger: TCGGGATCCATCTGAGATGCATGCTAAGCTATGTGT...TGTATCAGTGATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614987.5
ENST00000648062.1
CDS-3UTR GCA 90 bp TTGTTTGAAGGGTGCAAATTTCAAAAACCCACATTGTCCACAAGGCAAAGCAAAATGACCTTGGCTCACTaGAACCTCTGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: LFEGCKFQKPTLSTRQSKMTLAH*NLCLLG
Trigger: ACCCAGGAGGCAGAGGTTGCAGTGAGCCAAGGTCAT...TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAATTTGCACCCTTCAAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp GAAAACAGACCCCTTTCTCTGATAAATCATTGTTTGAAGGGTGCAAATTTCAAACGCCTCCCGGGTTCATaGCATTCTCCTGTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: ENRPLSLINHCLKGANFKRLPGS*HSPVSA
Trigger: GGCTGAGACAGGAGAATGGCATGAACCCGGGAGGCG...TTTGAAATTTGCACCCTTCAAACAATGATTTATCAGAGAAAGGGGTCTGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp ACCCACATTGTCCACAAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTAGTGCAGTGGTGTGGTaGGATCTTGGCTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: THIVHKAKQKVSSQYESFSAVVW*DLGSLQ
Trigger: TTGCAGTGAGCCAAGATCGCACCACACCACTGCACT...AAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTTGTGGACAATGTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp TTGTTTGAAGGGTGCAAATTTCAAAAACCCACATTGTCCACAAGGCAAAGCAAATTCTGCCTGACAGGCTaGCTTGGGCTACTACACAGC +
Preference number: 4 (lower is better)
Translates to: LFEGCKFQKPTLSTRQSKFCLTG*LGLLHS
Trigger: GCTGTGTAGTAGCCCAAGGCAGCCTGTCAGGCAGAA...TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAATTTGCACCCTTCAAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp CCTGGCAACATTTGTCACTCCAGGACGTTCAACTCCCATGTGAAACTGAAGAGGTTGTTGGCAGACATCTaGAAAACCTGTGACTTACAA +
Preference number: 4 (lower is better)
Translates to: PGNICHSRTFNSHVKLKRLLADI*KTCDLQ
Trigger: TTGTAAGTCACAGGTTTTCCAGATGTCTGCCAACAA...CCTCTTCAGTTTCACATGGGAGTTGAACGTCCTGGAGTGACAAATGTTGCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648062.1
CDS-3UTR CCA 90 bp AAGCATAAAAGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCCAGGTGGGAGTACAGTaGTACAATCTTGGTTCACTG +
Preference number: 4 (lower is better)
Translates to: KHKRSPQAYAEGIKVQWIQVGVQ*YNLGSL
Trigger: CAGTGAACCAAGATTGTACCACTGTACTCCCACCTG...GATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCTTTTATGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp TGTTGGCATCATGCTAGGTTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTACTCAGTACGGTGACCTaGACTGCAGCAAGATCGGGC +
Preference number: 4 (lower is better)
Translates to: CWHHARLLKRVICALFTVLSTVT*TAARSG
Trigger: GCCCGATCTTGCTGCAGTCCAGGTCACCGTACTGAG...TACTGTGAATAGAGCACATATTACTCTTTTTAGCAACCTAGCATGATGCCAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp GATGAATTAGCTACTGCTTATCAGGCAACTAACAGAGCCGGCAACAGAAAGGTTAAACAGTGCACTTGGTaGCTACATACGGCTAATCGC +
Preference number: 4 (lower is better)
Translates to: DELATAYQATNRAGNRKVKQCTW*LHTANR
Trigger: GCGATTAGCCGTATGTAGCCACCAAGTGCACTGTTT...AACCTTTCTGTTGCCGGCTCTGTTAGTTGCCTGATAAGCAGTAGCTAATTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATGCACCTCATGCTCTGTaGAACGCTCTCTTTGAGAAA +
Preference number: 4 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNAPHAL*NALFEK
Trigger: TTTCTCAAAGAGAGCGTTTCACAGAGCATGAGGTGC...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR TCA 90 bp AAGTTACTCACATCTAATTCATCTCGAATGACTGGCTTAAATGGTGCAGGCACTTGCCTTGTCATGTCCTaGATCTCCCCCTCTGACAAT +
Preference number: 4 (lower is better)
Translates to: KLLTSNSSRMTGLNGAGTCLVMS*ISPSDN
Trigger: ATTGTCAGAGGGGGAGATTCAGGACATGACAAGGCA...AGTGCCTGCACCATTTAAGCCAGTCATTCGAGATGAATTAGATGTGAGTAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
CDS-3UTR TCA 90 bp AGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACTGATACATTTCTCCATCAACAGTaGAAGGAGATGCTCCAGTTA +
Preference number: 4 (lower is better)
Translates to: RSPQAYAEGIKVQWITDTFLHQQ*KEMLQL
Trigger: TAACTGGAGCATCTCCTTTCACTGTTGATGGAGAAA...TGTATCAGTGATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR TCA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATCAGCTGCATTACGCTTaGATAGGATGGAAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNQLHYA*IGWKEQ
Trigger: TTGCTCCTTCCATCCTATTCAAGCGTAATGCAGCTG...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR TCA 90 bp AGATGTTCTTTGATTTCATCTGCATCACGTGGACCACATCCCAATCTCTTCTTGCAGCTGCATTACGCTTaGATAGGATGGAAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: RCSLISSASRGPHPNLFLQLHYA*IGWKEQ
Trigger: TTGCTCCTTCCATCCTATTCAAGCGTAATGCAGCTG...CAAGAAGAGATTGGGATGTGGTCCACGTGATGCAGATGAAATCAAAGAACATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
CDS-3UTR TCA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATAAACAAGCTTCCTCATaGTGTAGCTGGCTTCCGTCT +
Preference number: 4 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNKQASS*CSWLPS
Trigger: AGACGGAAGCCAGCTACATCATGAGGAAGCTTGTTT...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR TCA 90 bp TCTCCATCAACAGTGAAAGGAGATGCTCCAGTTAGTAATTCATACATTAGAACAGGAGTCTTCAGGGGCTaGTTATCCGGTGGCTTTAGC +
Preference number: 4 (lower is better)
Translates to: SPSTVKGDAPVSNSYIRTGVFRG*LSGGFS
Trigger: GCTAAAGCCACCGGATAATCAGCCCCTGAAGACTCC...TGTTCTAATGTATGAATTACTAACTGGAGCATCTCCTTTCACTGTTGATGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR TCA 90 bp AAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATCGGCATAATGAAGGGTaGAGCATGGAGTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: KAKQKVSSQYESFLVGRHRHNEG*SMESSG
Trigger: CCCTGAAGACTCCATGCTTCACCCTTCATTATGCCG...ATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR TCA 90 bp TCATGTCCTGAATCTCCCCCTCTGACAATATCTGGTGCCATGTATTCAATAGTTGGAGGCAGATTCCAATaGGACCAACGGGAAACATTT +
Preference number: 4 (lower is better)
Translates to: SCPESPPLTISGAMYSIVGGRFQ*DQRETF
Trigger: AAATGTTTCCCGTTGGTCTCATTGGAATCTGCCTCC...AACTATTGAATACATGGCACCAGATATTGTCAGAGGGGGAGATTCAGGACATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648062.1
CDS-3UTR TCA 90 bp TTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCGGTACAAGGATTGCTTaGGCCCAGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: LLKRVICALFTVTFSVQCGTRIA*AQEVEV
Trigger: AACCTCCACCTCCTGGGCTCAAGCAATCCTTGTACC...GCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTTAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp GATGAATTAGCTACTGCTTATCAGGCAACTAACAGAGCCGGCAACAGAAAGGTTGTACGGAGTATGGGATaGACTGATGCAGTTAAGGAA +
Preference number: 4 (lower is better)
Translates to: DELATAYQATNRAGNRKVVRSMG*TDAVKE
Trigger: TTCCTTAACTGCATCAGTTCATCCCATACTCCGTAC...AACCTTTCTGTTGCCGGCTCTGTTAGTTGCCTGATAAGCAGTAGCTAATTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp GATGAATTAGCTACTGCTTATCAGGCAACTAACAGAGCCGGCAACAGAAAGGTTGGACAAAGGAACAAATaGATAAACCGGGTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: DELATAYQATNRAGNRKVGQRNK*INRVPS
Trigger: TGAAGGCACCCGGTTTATTCATTTGTTCCTTTGTCC...AACCTTTCTGTTGCCGGCTCTGTTAGTTGCCTGATAAGCAGTAGCTAATTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp AGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACTGATACACAAGGCAGACATGAATaGCAGGCTTTATCTTTCATG +
Preference number: 4 (lower is better)
Translates to: RSPQAYAEGIKVQWITDTQGRHE*QALSFM
Trigger: CATGAAAGATAAAGCCTGTCATTCATGTCTGCCTTG...TGTATCAGTGATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp TGTTGGCATCATGCTAGGTTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAGGTAATTCTTCTGCCTaGCAGGCTGCCTTGGGCTAC +
Preference number: 4 (lower is better)
Translates to: CWHHARLLKRVICALFTVGNSSA*QAALGY
Trigger: GTAGCCCAAGGCAGCCTGTCAGGCAGAAGAATTACC...TACTGTGAATAGAGCACATATTACTCTTTTTAGCAACCTAGCATGATGCCAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp CATACATTAGAACACCCAAACTCCACCAGTCAACTGCCTTGTCATGTCCTGAATCGTTCTGTCCTTGTATaGTCTGTGGTTTTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: HTLEHPNSTSQLPCHVLNRSVLV*SVVLAF
Trigger: AAAGGCCAAAACCACAGAGCATACAAGGACAGAACG...ATTCAGGACATGACAAGGCAGTTGACTGGTGGAGTTTGGGTGTTCTAATGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
CDS-3UTR GCA 90 bp AAGCATAAAAGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACCAAAAATGGCGACTaGCTAATGTGTTCCAGGACT +
Preference number: 4 (lower is better)
Translates to: KHKRSPQAYAEGIKVQWITKNGD*LMCSRT
Trigger: AGTCCTGGAACACATTAGGCAGTCGCCATTTTTGGT...GATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCTTTTATGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR GCA 90 bp AGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACTGATACATTCTTTGATTTCATCTaGATCACGTGGACCACATCC +
Preference number: 4 (lower is better)
Translates to: RSPQAYAEGIKVQWITDTFFDFI*ITWTTS
Trigger: GGATGTGGTCCACGTGATGCAGATGAAATCAAAGAA...TGTATCAGTGATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR GCA 90 bp AAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATGCTTTCACACAGGTATaGACGGCAGCTCCGGAAGAT +
Preference number: 4 (lower is better)
Translates to: KAKQKVSSQYESFLVGRHAFTQV*TAAPED
Trigger: ATCTTCCGGAGCTGCCGTGCATACCTGTGTGAAAGC...ATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR GCA 90 bp TTGATCCTTGATGTGAGAATAACTGTATTCCTTGCATGTTCAGAATGTCCTTATTCTCACTGGAACTGCTaGGCGTCTCGGTACTGGTGC +
Preference number: 4 (lower is better)
Translates to: LILDVRITVFLACSECPYSHWNC*ASRYWC
Trigger: GCACCAGTACCGAGACGCGCAGCAGTTCCAGTGAGA...ATAAGGACATTCTGAACATGCAAGGAATACAGTTATTCTCACATCAAGGATCAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp TTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCAACTCTCACTGGAACTaGTGCGCGTCTCGGTACTGG +
Preference number: 4 (lower is better)
Translates to: LLKRVICALFTVTFSVQCNSHWN*CASRYW
Trigger: CCAGTACCGAGACGCGCAGCAGTTCCAGTGAGAGTT...GCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTTAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR GCA 90 bp TTGATCCTTGATGTGAGAATAACTGTATTCCTTGCATGTTCAGAATGTCCTTATGGGTCTCCGGGTTATTaGTGTCGGCAGGATTGCTGG +
Preference number: 4 (lower is better)
Translates to: LILDVRITVFLACSECPYGSPGY*CRQDCW
Trigger: CCAGCAATCCTGCCGACAGCAATAACCCGGAGACCC...ATAAGGACATTCTGAACATGCAAGGAATACAGTTATTCTCACATCAAGGATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp AAACATTTCCTATTTTGCACTAGGGTGAAGAAACCAAGACACAAACATTTGGAAGTGATCACAGCTCACTaGAGCCTCGAACTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: KHFLFCTRVKKPRHKHLEVITAH*SLELLG
Trigger: GCCCAGGAGTTCGAGGCTGCAGTGAGCTGTGATCAC...TTCCAAATGTTTGTGTCTTGGTTTCTTCACCCTAGTGCAAAATAGGAAATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp CATGACACAACATGCCCCATTCTACTTGTTGCATACAAAGTAGAAGAGGAATGTTCTTGGGGTAAATACTaGAGCAGCAAGTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: HDTTCPILLVAYKVEEECSWGKY*SSKCCW
Trigger: CCAGCAGCACTTGCTGCTGCAGTATTTACCCCAAGA...ACATTCCTCTTCTACTTTGTATGCAACAAGTAGAATGGGGCATGTTGTGTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp AGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATCTGGAAATTCATGCCATTCTCCTaGCTCAGCCTCGTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: SKRYHHSMSHFLLADIWKFMPFS*LSLVSS
Trigger: GCTACTCACGAGGCTGAGGCAGGAGAATGGCATGAA...TTTCCAGATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp AAGCATAAAAGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACCTGTCTAAAACAGTaGACTTGGTGGCTACATACG +
Preference number: 4 (lower is better)
Translates to: KHKRSPQAYAEGIKVQWITCLKQ*TWWLHT
Trigger: CGTATGTAGCCACCAAGTGCACTGTTTTAGACAGGT...GATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCTTTTATGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp CAGGGCTGCGGGAGAATAAGTGGGATCCATTTCTGTGAACTCTTCTGCAAAGTTTATGCTCTGTGGTTTTaGCCTTTTGAACGATTGTTG +
Preference number: 4 (lower is better)
Translates to: QGCGRISGIHFCELFCKVYALWF*PFERLL
Trigger: CAACAATCGTTCAAAAGGCCAAAACCACAGAGCATA...AACTTTGCAGAAGAGTTCACAGAAATGGATCCCACTTATTCTCCCGCAGCCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CCA 90 bp AGAGGGTCTATGACAGCTGCATTACGCTTGAATAGGATGGAAGGAGCAACAAAGTCCTTGTATGCTCTGTaGTTTTGGCCTTTTGAACGA +
Preference number: 4 (lower is better)
Translates to: RGSMTAALRLNRMEGATKSLYAL*FWPFER
Trigger: TCGTTCAAAAGGCCAAAACCACAGAGCATACAAGGA...CTTTGTTGCTCCTTCCATCCTATTCAAGCGTAATGCAGCTGTCATAGACCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CCA 90 bp CCAGTTCCTAGGACCTTCAGGAGCTCAAAATTTTCTATTCCCACCTTCTCAGCATCCTTGTATGCTCTGTaGTTTTGGCCTTTTGAACGA +
Preference number: 4 (lower is better)
Translates to: PVPRTFRSSKFSIPTFSASLYAL*FWPFER
Trigger: TCGTTCAAAAGGCCAAAACCACAGAGCATACAAGGA...TGCTGAGAAGGTGGGAATAGAAAATTTTGAGCTCCTGAAGGTCCTAGGAACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000556594.1
CDS-3UTR CCA 90 bp AGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACTGATACATCCTTGTATGCTCTGTaGTTTTGGCCTTTTGAACGA +
Preference number: 4 (lower is better)
Translates to: RSPQAYAEGIKVQWITDTSLYAL*FWPFER
Trigger: TCGTTCAAAAGGCCAAAACCACAGAGCATACAAGGA...TGTATCAGTGATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATATAATCCCCAACTTGTaGAGATGTTCGAGGGCAAGC +
Preference number: 4 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNIIPNL*RCSRAS
Trigger: GCTTGCCCTCGAACATCTCCACAAGTTGGGGATTAT...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR CCA 90 bp TCAGGGGCTGATTATCCGGTGGCTTTAGCCGTGCAAATCCAAAATCAATTATTTATAATCCCCAACTTGTaGAGATGTTCGAGGGCAAGC +
Preference number: 4 (lower is better)
Translates to: SGADYPVALAVQIQNQLFIIPNL*RCSRAS
Trigger: GCTTGCCCTCGAACATCTCCACAAGTTGGGGATTAT...AAATAATTGATTTTGGATTTGCACGGCTAAAGCCACCGGATAATCAGCCCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648062.1
CDS-3UTR CCA 90 bp GCCTTGTCATGTCCTGAATCTCCCCCTCTGACAATATCTGGTGCCATGTATTCACCCTCTGACAATATCTaGTGCCATGTATTCAATAGT +
Preference number: 4 (lower is better)
Translates to: ALSCPESPPLTISGAMYSPSDNI*CHVFNS
Trigger: ACTATTGAATACATGGCACCAGATATTGTCAGAGGG...TGAATACATGGCACCAGATATTGTCAGAGGGGGAGATTCAGGACATGACAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CCA 90 bp AAGCATAAAAGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCTTCATCTGCATCACGTaGACCACATCCCAATCTCTT +
Preference number: 4 (lower is better)
Translates to: KHKRSPQAYAEGIKVQWIFICIT*TTSQSL
Trigger: AAGAGATTGGGATGTGGTCCACGTGATGCAGATGAA...GATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCTTTTATGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp TCACTATCTATATGTAGTTTTAGTGCTCCATTTGGACTGGTCTCTGGCCACTGGCCAACATCATGCATGTaGCTTACAGCTGAAACAAGC +
Preference number: 4 (lower is better)
Translates to: SLSICSFSAPFGLVSGHWPTSCM*LTAETS
Trigger: GCTTGTTTCAGCTGTAAGCCACATGCATGATGTTGG...CCAGTGGCCAGAGACCAGTCCAAATGGAGCACTAAAACTACATATAGATAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp TCAGGGGCTGATTATCCGGTGGCTTTAGCCGTGCAAATCCAAAATCAATTATTTATGAAGGGTGAAGCATaGAGTCTTCAGGGGCTGATT +
Preference number: 4 (lower is better)
Translates to: SGADYPVALAVQIQNQLFMKGEA*SLQGLI
Trigger: AATCAGCCCCTGAAGACTCCATGCTTCACCCTTCAT...AAATAATTGATTTTGGATTTGCACGGCTAAAGCCACCGGATAATCAGCCCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CCA 90 bp GGAATATGCTCTTTCAGTAGTTCCATGTGGATGGGGGAGGTCTCACAATCATGGACTGTGAGAAGTCCTTaGATCAAATCTTTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: GICSFSSSMWMGEVSQSWTVRSP*IKSLAS
Trigger: AGAGGCTAAAGATTTGATCCAAGGACTTCTCACAGT...CCATGATTGTGAGACCTCCCCCATCCACATGGAACTACTGAAAGAGCATATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648062.1
CDS-3UTR CCA 90 bp TTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCAATGGGAACTCTCACTaGAACTGCTGCGCGTCTCGG +
Preference number: 4 (lower is better)
Translates to: LLKRVICALFTVTFSVQCNGNSH*NCCASR
Trigger: CCGAGACGCGCAGCAGTTCCAGTGAGAGTTCCCATT...GCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTTAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp AAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATCTGGATGTCAGTGTTTaGAGCAGTGGGCAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: KAKQKVSSQYESFLVGRHLDVSV*SSGQQE
Trigger: TTCCTGCTGCCCACTGCTCCAAACACTGACATCCAG...ATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp ACCCACATTGTCCACAAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTCTCTATCGCCCAGGATaGAATGTAGTGGTGCGATCA +
Preference number: 4 (lower is better)
Translates to: THIVHKAKQKVSSQYESFLYRPG*NVVVRS
Trigger: TGATCGCACCACTACATTCCATCCTGGGCGATAGAG...AAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTTGTGGACAATGTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp TTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCAGCCTCCCACGTAGCTaGGATTACAGGCATGCACCA +
Preference number: 4 (lower is better)
Translates to: LLKRVICALFTVTFSVQCSLPRS*DYRHAP
Trigger: TGGTGCATGCCTGTAATCCCAGCTACGTGGGAGGCT...GCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTTAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp AGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACTGATACAACAGTGGTACAATCTTaGTTCACTGCAACTTCTGCT +
Preference number: 4 (lower is better)
Translates to: RSPQAYAEGIKVQWITDTTVVQS*FTATSA
Trigger: AGCAGAAGTTGCAGTGAACCAAGATTGTACCACTGT...TGTATCAGTGATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp TCACTATCTATATGTAGTTTTAGTGCTCCATTTGGACTGGTCTCTGGCCACTGGGTGAGCCTGAAATACTaGTACAGTATCTCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: SLSICSFSAPFGLVSGHWVSLKY*YSISLR
Trigger: CCTCAAGGAGATACTGTACCAGTATTTCAGGCTCAC...CCAGTGGCCAGAGACCAGTCCAAATGGAGCACTAAAACTACATATAGATAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp GATGAATTAGCTACTGCTTATCAGGCAACTAACAGAGCCGGCAACAGAAAGGTTGTGGCAAAGTTATCTTaGGGTAAATACTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: DELATAYQATNRAGNRKVVAKLS*GKYCSS
Trigger: GCTGCTGCAGTATTTACCCCAAGATAACTTTGCCAC...AACCTTTCTGTTGCCGGCTCTGTTAGTTGCCTGATAAGCAGTAGCTAATTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp TTGATCCTTGATGTGAGAATAACTGTATTCCTTGCATGTTCAGAATGTCCTTATCAGGCTGGAGTGCAGTaGTGTGGTGCGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LILDVRITVFLACSECPYQAGVQ*CGAILA
Trigger: AGCCAAGATCGCACCACACCACTGCACTCCAGCCTG...ATAAGGACATTCTGAACATGCAAGGAATACAGTTATTCTCACATCAAGGATCAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR CAA 72 bp AGTTCTCACAAGAGGCTCACTGTACAAGGTCCAACTTaGCATCTAACTTCAACACACAGCCTTCCCAATCAT +
Preference number: 4 (lower is better)
Translates to: SSHKRLTVQGPT*HLTSTHSLPNH
Trigger: ATGATTGGGAAGGCTGTGTGTTGAAGTTAGATGCAAAGTTGGACCTTGTACAGTGAGCCTCTTGTGAGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp TTGTTTGAAGGGTGCAAATTTCAAAAACCCACATTGTCCACAAGGCAAAGCAAATGCCTTGTCATGTCCTaGATCTCCCCCTCTGACAAT +
Preference number: 4 (lower is better)
Translates to: LFEGCKFQKPTLSTRQSKCLVMS*ISPSDN
Trigger: ATTGTCAGAGGGGGAGATTCAGGACATGACAAGGCA...TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAATTTGCACCCTTCAAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR TCA 90 bp ATGCAACTTCACAATATTGGGGTGTCCTTCACAGAGTTTCAGAGCTGTTATTTCCAGCTGCATTACGCTTaGATAGGATGGAAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: MQLHNIGVSFTEFQSCYFQLHYA*IGWKEQ
Trigger: TTGCTCCTTCCATCCTATTCAAGCGTAATGCAGCTG...GAAATAACAGCTCTGAAACTCTGTGAAGGACACCCCAATATTGTGAAGTTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR TCA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATCATGTGGCTTACAGCTaGAACAAGCTTCCTCATGAT +
Preference number: 4 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNHVAYS*NKLPHD
Trigger: ATCATGAGGAAGCTTGTTTCAGCTGTAAGCCACATG...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR TCA 90 bp AAACATTTCCTATTTTGCACTAGGGTGAAGAAACCAAGACACAAACATTTGGAAGGAGTCTTCAGGGGCTaGTTATCCGGTGGCTTTAGC +
Preference number: 4 (lower is better)
Translates to: KHFLFCTRVKKPRHKHLEGVFRG*LSGGFS
Trigger: GCTAAAGCCACCGGATAATCAGCCCCTGAAGACTCC...TTCCAAATGTTTGTGTCTTGGTTTCTTCACCCTAGTGCAAAATAGGAAATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp AAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATGGATTGGAGGACAGCTaGCTTCCATCTTGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: KAKQKVSSQYESFLVGRHGLEDS*LPSCSH
Trigger: ATGGCTACAAGATGGAAGTCAGCTGTCCTCCAATCC...ATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR TCA 90 bp AGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATCTGGAAAGGATTGGAGGACAGCTaGCTTCCATCTTGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: SKRYHHSMSHFLLADIWKGLEDS*LPSCSH
Trigger: ATGGCTACAAGATGGAAGTCAGCTGTCCTCCAATCC...TTTCCAGATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR TCA 90 bp TGTTGGCATCATGCTAGGTTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTACCATGCCTAAGCTACTaGGTCCGAGAACTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: CWHHARLLKRVICALFTVPCLSY*VRELEE
Trigger: CTCTTCCAGTTCTCGGACTCAGTAGCTTAGGCATGG...TACTGTGAATAGAGCACATATTACTCTTTTTAGCAACCTAGCATGATGCCAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR TCA 90 bp AAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATGCCTCAGGCATATGCTaGGGGAATAAAGGTGCAATG +
Preference number: 4 (lower is better)
Translates to: KAKQKVSSQYESFLVGRHASGIC*GNKGAM
Trigger: CATTGCACCTTTATTCCCTCAGCATATGCCTGAGGC...ATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR TCA 90 bp TTGTTTGAAGGGTGCAAATTTCAAAAACCCACATTGTCCACAAGGCAAAGCAAAGCCTCAGGCATATGCTaGGGGAATAAAGGTGCAATG +
Preference number: 4 (lower is better)
Translates to: LFEGCKFQKPTLSTRQSKASGIC*GNKGAM
Trigger: CATTGCACCTTTATTCCCTCAGCATATGCCTGAGGC...TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAATTTGCACCCTTCAAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR TCA 90 bp GTGAACTCTTCTGCAAAGTTACTCACATCTAATTCATCTCGAATGACTGGCTTAGCCTCAGGCATATGCTaGGGGAATAAAGGTGCAATG +
Preference number: 4 (lower is better)
Translates to: VNSSAKLLTSNSSRMTGLASGIC*GNKGAM
Trigger: CATTGCACCTTTATTCCCTCAGCATATGCCTGAGGC...TAAGCCAGTCATTCGAGATGAATTAGATGTGAGTAACTTTGCAGAAGAGTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648062.1
CDS-3UTR TCA 90 bp ACCCACATTGTCCACAAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTGGAGGCAGATTCCAATaGGACCAACGGGAAACATTT +
Preference number: 4 (lower is better)
Translates to: THIVHKAKQKVSSQYESFGGRFQ*DQRETF
Trigger: AAATGTTTCCCGTTGGTCTCATTGGAATCTGCCTCC...AAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTTGTGGACAATGTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR TCA 90 bp TCACTATCTATATGTAGTTTTAGTGCTCCATTTGGACTGGTCTCTGGCCACTGGTCTGTCCAGTGCTTTTaGATGAGGATAACCAAACAG +
Preference number: 4 (lower is better)
Translates to: SLSICSFSAPFGLVSGHWSVQCF*MRITKQ
Trigger: CTGTTTGGTTATCCTCATTCAAAAGCACTGGACAGA...CCAGTGGCCAGAGACCAGTCCAAATGGAGCACTAAAACTACATATAGATAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp ATGCAACTTCACAATATTGGGGTGTCCTTCACAGAGTTTCAGAGCTGTTATTTCAAGTGGCTGACTACATaGCACAACATGCCCCATTCT +
Preference number: 4 (lower is better)
Translates to: MQLHNIGVSFTEFQSCYFKWLTT*HNMPHS
Trigger: AGAATGGGGCATGTTGTGTCATGTAGTCAGCCACTT...GAAATAACAGCTCTGAAACTCTGTGAAGGACACCCCAATATTGTGAAGTTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648062.1
CDS-3UTR TCA 90 bp AGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACTGATACAACTATTAGGAATAACTaGATGCCTACCACAGCAACA +
Preference number: 4 (lower is better)
Translates to: RSPQAYAEGIKVQWITDTTIRNN*MPTTAT
Trigger: TGTTGCTGTGGTAGGCATTCAGTTATTCCTAATAGT...TGTATCAGTGATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp AGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACTGATACATGGAGCTACCATATATaGCAGTGTCCTATTATTGCT +
Preference number: 4 (lower is better)
Translates to: RSPQAYAEGIKVQWITDTWSYHI*QCPIIA
Trigger: AGCAATAATAGGACACTGTCATATATGGTAGCTCCA...TGTATCAGTGATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp AAGCATAAAAGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCGGGAAAAACAGCATCTaGTATGTGCACCCTATTGTA +
Preference number: 4 (lower is better)
Translates to: KHKRSPQAYAEGIKVQWIGKNSI*YVHPIV
Trigger: TACAATAGGGTGCACATATCAGATGCTGTTTTTCCC...GATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCTTTTATGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp TCACTATCTATATGTAGTTTTAGTGCTCCATTTGGACTGGTCTCTGGCCACTGGAAGGAAGGAATTAAGTaGGCTCTTTGGGTAACCTTG +
Preference number: 4 (lower is better)
Translates to: SLSICSFSAPFGLVSGHWKEGIK*ALWVTL
Trigger: CAAGGTTACCCAAAGAGCTCACTTAATTCCTTCCTT...CCAGTGGCCAGAGACCAGTCCAAATGGAGCACTAAAACTACATATAGATAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp TTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCCTCATCTCAGTACGGTaGCCTGGACTGCAGCAAGAT +
Preference number: 4 (lower is better)
Translates to: LLKRVICALFTVTFSVQCLISVR*PGLQQD
Trigger: ATCTTGCTGCAGTCCAGGTCACCGTACTGAGATGAG...GCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTTAGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp TTGTTTGAAGGGTGCAAATTTCAAAAACCCACATTGTCCACAAGGCAAAGCAAAGGGCTACTACACAGCTaGTATGAGTGGACAGCAAAG +
Preference number: 4 (lower is better)
Translates to: LFEGCKFQKPTLSTRQSKGLLHS*YEWTAK
Trigger: CTTTGCTGTCCACTCATATCAGCTGTGTAGTAGCCC...TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAATTTGCACCCTTCAAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp TCACTATCTATATGTAGTTTTAGTGCTCCATTTGGACTGGTCTCTGGCCACTGGTCGCAACCAGCCCTTTaGAACTGGAAACAAAGTTTT +
Preference number: 4 (lower is better)
Translates to: SLSICSFSAPFGLVSGHWSQPAL*NWKQSF
Trigger: AAAACTTTGTTTCCAGTTTCAAAGGGCTGGTTGCGA...CCAGTGGCCAGAGACCAGTCCAAATGGAGCACTAAAACTACATATAGATAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATCGTTCTGTCCTTGTATaGTCTGTGGTTTTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNRSVLV*SVVLAF
Trigger: AAAGGCCAAAACCACAGAGCATACAAGGACAGAACG...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR GCA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATACCAAAAATGGCGACTaGCTAATGTGTTCCAGGACT +
Preference number: 4 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNTKNGD*LMCSRT
Trigger: AGTCCTGGAACACATTAGGCAGTCGCCATTTTTGGT...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR GCA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATACCACTCCAACATCATaGATGTGGCTTACAGCTGAA +
Preference number: 4 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNTTPTS*MWLTAE
Trigger: TTCAGCTGTAAGCCACATGCATGATGTTGGAGTGGT...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR GCA 90 bp TCAAAAGACGCTGAATTAGGTCTTTCGCTAAAGCACTCATTTCTTGGGGATATGAAAGGCGTGGAAGGTTaGTTTCACACAGGTATGCAC +
Preference number: 4 (lower is better)
Translates to: SKDAELGLSLKHSFLGDMKGVEG*FHTGMH
Trigger: GTGCATACCTGTGTGAAAGCAACCTTCCACGCCTTT...CATATCCCCAAGAAATGAGTGCTTTAGCGAAAGACCTAATTCAGCGTCTTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR GCA 90 bp TTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCTTGCCCAATCTGGAGTaGAATGGTGCGACCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LLKRVICALFTVTFSVQCLPNLE*NGATLA
Trigger: AGCCAAGGTCGCACCATTGCACTCCAGATTGGGCAA...GCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTTAGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp AGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACTGATACATCTATAAAAACAGGCTaGAAGTGCCAAAGTGACACA +
Preference number: 4 (lower is better)
Translates to: RSPQAYAEGIKVQWITDTSIKTG*KCQSDT
Trigger: TGTGTCACTTTGGCACTTGCAGCCTGTTTTTATAGA...TGTATCAGTGATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp AAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCTTTTGGAATCTCCATGGCCGTaGATGGTGGCTCATGCCTGT +
Preference number: 4 (lower is better)
Translates to: KKSNMCSIHSNILCPVLLESPWP*MVAHAC
Trigger: ACAGGCATGAGCCACCATGCACGGCCATGGAGATTC...CAAAAGCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATTTCATCTGCATCACGTaGACCACATCCCAATCTCTT +
Preference number: 4 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNFICIT*TTSQSL
Trigger: AAGAGATTGGGATGTGGTCCACGTGATGCAGATGAA...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR CCA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATTTCATCTCGAATGACTaGCTTAAATGGTGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNFISND*LKWCRH
Trigger: GTGCCTGCACCATTTAAGCCAGTCATTCGAGATGAA...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR CCA 90 bp AGGACAGCTGACTTCCATCTTGTAGCCATTCATTGTACCTCAAGCCAGACATTTGCAACTTCACAATATTaGGGTGTCCTTCACAGAGTT +
Preference number: 4 (lower is better)
Translates to: RTADFHLVAIHCTSSQTFATSQY*GVLHRV
Trigger: AACTCTGTGAAGGACACCCCAATATTGTGAAGTTGC...AAATGTCTGGCTTGAGGTACAATGAATGGCTACAAGATGGAAGTCAGCTGTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CCA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATCCAACATCATGCATGTaGCTTACAGCTGAAACAAGC +
Preference number: 4 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNPTSCM*LTAETS
Trigger: GCTTGTTTCAGCTGTAAGCCACATGCATGATGTTGG...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR CCA 90 bp TTGTTTGAAGGGTGCAAATTTCAAAAACCCACATTGTCCACAAGGCAAAGCAAACTGATTCAAGAGCTCTaGGGCGGCATAATGAAGGGT +
Preference number: 4 (lower is better)
Translates to: LFEGCKFQKPTLSTRQSKLIQEL*GGIMKG
Trigger: ACCCTTCATTATGCCGCCCCAGAGCTCTTGAATCAG...TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAATTTGCACCCTTCAAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp AGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATCTGGAAACTGATTCAAGAGCTCTaGGGCGGCATAATGAAGGGT +
Preference number: 4 (lower is better)
Translates to: SKRYHHSMSHFLLADIWKLIQEL*GGIMKG
Trigger: ACCCTTCATTATGCCGCCCCAGAGCTCTTGAATCAG...TTTCCAGATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp ACCCACATTGTCCACAAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTGAGTCATCAGAGGATTaGAGGACAGCTGACTTCCAT +
Preference number: 4 (lower is better)
Translates to: THIVHKAKQKVSSQYESFESSED*RTADFH
Trigger: ATGGAAGTCAGCTGTCCTCCAATCCTCTGATGACTC...AAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTTGTGGACAATGTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp CAAGCCAGACATTTTAAGCCTTTTGTTTGGATCTACTGTGAGAAGTCCTTGGATGAGTCATCAGAGGATTaGAGGACAGCTGACTTCCAT +
Preference number: 4 (lower is better)
Translates to: QARHFKPFVWIYCEKSLDESSED*RTADFH
Trigger: ATGGAAGTCAGCTGTCCTCCAATCCTCTGATGACTC...ATCCAAGGACTTCTCACAGTAGATCCAAACAAAAGGCTTAAAATGTCTGGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CCA 90 bp TTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCACTGAGTCCGAGAACTaGAAGAGGGTCTCCGGGTTA +
Preference number: 4 (lower is better)
Translates to: LLKRVICALFTVTFSVQCTESEN*KRVSGL
Trigger: TAACCCGGAGACCCTCTTCCAGTTCTCGGACTCAGT...GCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTTAGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp TCTCCATCAACAGTGAAAGGAGATGCTCCAGTTAGTAATTCATACATTAGAACAACTGAGTCCGAGAACTaGAAGAGGGTCTCCGGGTTA +
Preference number: 4 (lower is better)
Translates to: SPSTVKGDAPVSNSYIRTTESEN*KRVSGL
Trigger: TAACCCGGAGACCCTCTTCCAGTTCTCGGACTCAGT...TGTTCTAATGTATGAATTACTAACTGGAGCATCTCCTTTCACTGTTGATGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CCA 90 bp AGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACTGATACAGGAATAAAGGTGCAATaGATCACTGATACACTCCTA +
Preference number: 4 (lower is better)
Translates to: RSPQAYAEGIKVQWITDTGIKVQ*ITDTLL
Trigger: TAGGAGTGTATCAGTGATCCATTGCACCTTTATTCC...TGTATCAGTGATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp AAACATTTCCTATTTTGCACTAGGGTGAAGAAACCAAGACACAAACATTTGGAAGAAGAAGGGAGGGGGTaGTGTGGCTCTAGTCCCAAA +
Preference number: 4 (lower is better)
Translates to: KHFLFCTRVKKPRHKHLEEEGRG*CGSSPK
Trigger: TTTGGGACTAGAGCCACACCACCCCCTCCCTTCTTC...TTCCAAATGTTTGTGTCTTGGTTTCTTCACCCTAGTGCAAAATAGGAAATGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp AGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATCTGGAAAAGCCTCCCAGGTATTTaGTACTACAGGTGTGCACCA +
Preference number: 4 (lower is better)
Translates to: SKRYHHSMSHFLLADIWKSLPGI*YYRCAP
Trigger: TGGTGCACACCTGTAGTACCAAATACCTGGGAGGCT...TTTCCAGATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp AAACATTTCCTATTTTGCACTAGGGTGAAGAAACCAAGACACAAACATTTGGAAAGCCTCGTGAGTAGCTaGGACTACAGGCGCTCATCA +
Preference number: 4 (lower is better)
Translates to: KHFLFCTRVKKPRHKHLESLVSS*DYRRSS
Trigger: TGATGAGCGCCTGTAGTCCCAGCTACTCACGAGGCT...TTCCAAATGTTTGTGTCTTGGTTTCTTCACCCTAGTGCAAAATAGGAAATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp TTGATCCTTGATGTGAGAATAACTGTATTCCTTGCATGTTCAGAATGTCCTTATGTAATCCCATCACTTTaGGAGGCCCAGGTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LILDVRITVFLACSECPYVIPSL*EAQVAG
Trigger: TCCTGCCACCTGGGCCTCCCAAAGTGATGGGATTAC...ATAAGGACATTCTGAACATGCAAGGAATACAGTTATTCTCACATCAAGGATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp ATGCAACTTCACAATATTGGGGTGTCCTTCACAGAGTTTCAGAGCTGTTATTTCTTCAGTAGTTCCATGTaGATGGGGGAGGTCTCACAA +
Preference number: 4 (lower is better)
Translates to: MQLHNIGVSFTEFQSCYFFSSSM*MGEVSQ
Trigger: TTGTGAGACCTCCCCCATCCACATGGAACTACTGAA...GAAATAACAGCTCTGAAACTCTGTGAAGGACACCCCAATATTGTGAAGTTGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648062.1
CDS-3UTR TCA 90 bp TTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCTGCCTTGTCATGTCCTaGATCTCCCCCTCTGACAAT +
Preference number: 4 (lower is better)
Translates to: LLKRVICALFTVTFSVQCCLVMS*ISPSDN
Trigger: ATTGTCAGAGGGGGAGATTCAGGACATGACAAGGCA...GCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTTAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR TCA 90 bp TCAACAGTGAAAGGAGATGCTCCAGTTAGTAATTCATACATTAGAACACCCAAATGCCTTGTCATGTCCTaGATCTCCCCCTCTGACAAT +
Preference number: 4 (lower is better)
Translates to: STVKGDAPVSNSYIRTPKCLVMS*ISPSDN
Trigger: ATTGTCAGAGGGGGAGATTCAGGACATGACAAGGCA...TTTGGGTGTTCTAATGTATGAATTACTAACTGGAGCATCTCCTTTCACTGTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
CDS-3UTR TCA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATTTTCTCCATCAACAGTaGAAGGAGATGCTCCAGTTA +
Preference number: 4 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNFLHQQ*KEMLQL
Trigger: TAACTGGAGCATCTCCTTTCACTGTTGATGGAGAAA...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR TCA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATTGGGATCCATTTCTGTaGACTCTTCTGCAAAGTTAC +
Preference number: 4 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNWDPFL*TLLQSY
Trigger: GTAACTTTGCAGAAGAGTTCACAGAAATGGATCCCA...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR TCA 90 bp TCATGTCCTGAATCTCCCCCTCTGACAATATCTGGTGCCATGTATTCAATAGTTTGGGATCCATTTCTGTaGACTCTTCTGCAAAGTTAC +
Preference number: 4 (lower is better)
Translates to: SCPESPPLTISGAMYSIVWDPFL*TLLQSY
Trigger: GTAACTTTGCAGAAGAGTTCACAGAAATGGATCCCA...AACTATTGAATACATGGCACCAGATATTGTCAGAGGGGGAGATTCAGGACATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
CDS-3UTR TCA 90 bp AAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATAAACAAGCTTCCTCATaGTGTAGCTGGCTTCCGTCT +
Preference number: 4 (lower is better)
Translates to: KAKQKVSSQYESFLVGRHKQASS*CSWLPS
Trigger: AGACGGAAGCCAGCTACATCATGAGGAAGCTTGTTT...ATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR TCA 90 bp TTGTTTGAAGGGTGCAAATTTCAAAAACCCACATTGTCCACAAGGCAAAGCAAAACATTGTGTACAAAATaGCGCCCAAGCTCCACAGGT +
Preference number: 4 (lower is better)
Translates to: LFEGCKFQKPTLSTRQSKTLCTK*RPSSTG
Trigger: ACCTGTGGAGCTTGGGCGTCATTTTGTACACAATGT...TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAATTTGCACCCTTCAAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR TCA 90 bp TTGTTTGAAGGGTGCAAATTTCAAAAACCCACATTGTCCACAAGGCAAAGCAAAGTCAAACTTCGGTCATaGGATTGGAAGGGAACCTGT +
Preference number: 4 (lower is better)
Translates to: LFEGCKFQKPTLSTRQSKVKLRS*DWKGTC
Trigger: ACAGGTTCCCTTCCAATCTCATGACCGAAGTTTGAC...TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAATTTGCACCCTTCAAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR TCA 90 bp TTCTTTTTCTTAATGCGCTCAAACAGTTCTCCTCCATTCAGAAGTTCCATCACTGCCTTATCAACATTCTaGAGGCAAAACCCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: FFFLMRSNSSPPFRSSITALSTF*RQNPSL
Trigger: GAGAGAGGGGTTTTGCCTTCAGAATGTTGATAAGGC...AGTGATGGAACTTCTGAATGGAGGAGAACTGTTTGAGCGCATTAAGAAAAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR TCA 90 bp TGTCCTTCAAATCTAGGTCATAGTGTTGATAGAATGGAGAGTCCTTCATCATTGGCCTTATCAACATTCTaGAGGCAAAACCCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: CPSNLGHSVDRMESPSSLALSTF*RQNPSL
Trigger: GAGAGAGGGGTTTTGCCTTCAGAATGTTGATAAGGC...CAATGATGAAGGACTCTCCATTCTATCAACACTATGACCTAGATTTGAAGGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR TCA 90 bp AAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATAAGTGGCTGACTACATaGCACAACATGCCCCATTCT +
Preference number: 4 (lower is better)
Translates to: KAKQKVSSQYESFLVGRHKWLTT*HNMPHS
Trigger: AGAATGGGGCATGTTGTGTCATGTAGTCAGCCACTT...ATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614987.5
ENST00000648062.1
CDS-3UTR TCA 90 bp AGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATCTGGAAATGGTGCATAAGTGGCTaGCTACATGACACAACATGC +
Preference number: 4 (lower is better)
Translates to: SKRYHHSMSHFLLADIWKWCISG*LHDTTC
Trigger: GCATGTTGTGTCATGTAGTCAGCCACTTATGCACCA...TTTCCAGATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614987.5
ENST00000648062.1
CDS-3UTR TCA 90 bp AAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCTTTTGGGCAGGCTCATCAGTTaGCAGCTAGCCTATCTTTCC +
Preference number: 4 (lower is better)
Translates to: KKSNMCSIHSNILCPVLLGRLIS*QLAYLS
Trigger: GGAAAGATAGGCTAGCTGTCAACTGATGAGCCTGCC...CAAAAGCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp TCACTATCTATATGTAGTTTTAGTGCTCCATTTGGACTGGTCTCTGGCCACTGGGGTCTATCCTCCTTATaGTCCAAAAATCTTAGGCAA +
Preference number: 4 (lower is better)
Translates to: SLSICSFSAPFGLVSGHWGLSSL*SKNLRQ
Trigger: TTGCCTAAGATTTTTGGATCATAAGGAGGATAGACC...CCAGTGGCCAGAGACCAGTCCAAATGGAGCACTAAAACTACATATAGATAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp GATGAATTAGCTACTGCTTATCAGGCAACTAACAGAGCCGGCAACAGAAAGGTTGCTCTGTGTTCATTTTaGTTACTTCTTCAAGGCACT +
Preference number: 4 (lower is better)
Translates to: DELATAYQATNRAGNRKVALCSF*LLLQGT
Trigger: AGTGCCTTGAAGAAGTAATCAAAATGAACACAGAGC...AACCTTTCTGTTGCCGGCTCTGTTAGTTGCCTGATAAGCAGTAGCTAATTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp TTGTTTGAAGGGTGCAAATTTCAAAAACCCACATTGTCCACAAGGCAAAGCAAAGGGTGCCTTCACATATaGCCATGTGACAACCAAGTT +
Preference number: 4 (lower is better)
Translates to: LFEGCKFQKPTLSTRQSKGCLHI*PCDNQV
Trigger: AACTTGGTTGTCACATGGTCATATGTGAAGGCACCC...TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAATTTGCACCCTTCAAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp CATGACACAACATGCCCCATTCTACTTGTTGCATACAAAGTAGAAGAGGAATGTAGTGTGGGTGAACTGTaGACTGCATTAAGCTCTACA +
Preference number: 4 (lower is better)
Translates to: HDTTCPILLVAYKVEEECSVGEL*TALSST
Trigger: TGTAGAGCTTAATGCAGTTCACAGTTCACCCACACT...ACATTCCTCTTCTACTTTGTATGCAACAAGTAGAATGGGGCATGTTGTGTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp TTGATCCTTGATGTGAGAATAACTGTATTCCTTGCATGTTCAGAATGTCCTTATCTTCCCCAGAGGTCCTaGCATTGCTTACCAGCCATT +
Preference number: 4 (lower is better)
Translates to: LILDVRITVFLACSECPYLPQRS*HCLPAI
Trigger: AATGGCTGGTAAGCAATGTCAGGACCTCTGGGGAAG...ATAAGGACATTCTGAACATGCAAGGAATACAGTTATTCTCACATCAAGGATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATTTCTTTGATTTCATCTaGATCACGTGGACCACATCC +
Preference number: 4 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNFFDFI*ITWTTS
Trigger: GGATGTGGTCCACGTGATGCAGATGAAATCAAAGAA...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR GCA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATAGAGTCCTTCATCATTaGACTCCTGGCAACATTTGT +
Preference number: 4 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNRVLHH*TPGNIC
Trigger: ACAAATGTTGCCAGGAGTGCAATGATGAAGGACTCT...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR GCA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATTCCGTCTCACTGAAGTaGTTCTTTTTCTTAATGCGC +
Preference number: 4 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNSVSLK*FFFLMR
Trigger: GCGCATTAAGAAAAAGAAGCACTTCAGTGAGACGGA...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR GCA 90 bp TTGTTTGAAGGGTGCAAATTTCAAAAACCCACATTGTCCACAAGGCAAAGCAAAAAAGGCGTGGAAGGTTaGTTTCACACAGGTATGCAC +
Preference number: 4 (lower is better)
Translates to: LFEGCKFQKPTLSTRQSKKGVEG*FHTGMH
Trigger: GTGCATACCTGTGTGAAAGCAACCTTCCACGCCTTT...TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAATTTGCACCCTTCAAACAA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR GCA 90 bp AAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCTTTTGGAGGTCTCTCTATGTTaGCCAGGCTGGTCTCCAACT +
Preference number: 4 (lower is better)
Translates to: KKSNMCSIHSNILCPVLLEVSLC*PGWSPT
Trigger: AGTTGGAGACCAGCCTGGGCAACATAGAGAGACCTC...CAAAAGCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp GAAAACAGACCCCTTTCTCTGATAAATCATTGTTTGAAGGGTGCAAATTTCAAAAGGCGTGAGCCACAGTaGCCAGCCAGAGTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: ENRPLSLINHCLKGANFKRREPQ*PARVFK
Trigger: TTTAAAGACTCTGGCTGGGCACTGTGGCTCACGCCT...TTTGAAATTTGCACCCTTCAAACAATGATTTATCAGAGAAAGGGGTCTGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp TTGATCCTTGATGTGAGAATAACTGTATTCCTTGCATGTTCAGAATGTCCTTATTGCAGCAGCAAGTGCTaGTGGCAAGTATTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: LILDVRITVFLACSECPYCSSKC*WQVFLG
Trigger: CCCCAAGAATACTTGCCAGCAGCACTTGCTGCTGCA...ATAAGGACATTCTGAACATGCAAGGAATACAGTTATTCTCACATCAAGGATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp AGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACTGATACAGGTAATAAATCCAGCTaGTACAGAATGACAAGAAGA +
Preference number: 4 (lower is better)
Translates to: RSPQAYAEGIKVQWITDTGNKSS*YRMTRR
Trigger: TCTTCTTGTCATTCTGTAGCAGCTGGATTTATTACC...TGTATCAGTGATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp AAGCATAAAAGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCTATGCTCTGTGGTTTTaGCCTTTTGAACGATTGTTG +
Preference number: 4 (lower is better)
Translates to: KHKRSPQAYAEGIKVQWIYALWF*PFERLL
Trigger: CAACAATCGTTCAAAAGGCCAAAACCACAGAGCATA...GATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCTTTTATGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATTCCTTGTATGCTCTGTaGTTTTGGCCTTTTGAACGA +
Preference number: 4 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNSLYAL*FWPFER
Trigger: TCGTTCAAAAGGCCAAAACCACAGAGCATACAAGGA...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR CCA 90 bp TTGTTTGAAGGGTGCAAATTTCAAAAACCCACATTGTCCACAAGGCAAAGCAAAATAATCCCCAACTTGTaGAGATGTTCGAGGGCAAGC +
Preference number: 4 (lower is better)
Translates to: LFEGCKFQKPTLSTRQSKIIPNL*RCSRAS
Trigger: GCTTGCCCTCGAACATCTCCACAAGTTGGGGATTAT...TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAATTTGCACCCTTCAAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATTCTGTCAGCACCACATaGCCATTAGAATCAAGTAGA +
Preference number: 4 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNSVSTT*PLESSR
Trigger: TCTACTTGATTCTAATGGCCATGTGGTGCTGACAGA...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR CCA 90 bp AAGAGATGTTCTTTGATTTCATCTGCATCACGTGGACCACATCCCAATCTCTTCTCTGTCAGCACCACATaGCCATTAGAATCAAGTAGA +
Preference number: 4 (lower is better)
Translates to: KRCSLISSASRGPHPNLFSVSTT*PLESSR
Trigger: TCTACTTGATTCTAATGGCCATGTGGTGCTGACAGA...GAAGAGATTGGGATGTGGTCCACGTGATGCAGATGAAATCAAAGAACATCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CCA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATAAAGCACTCATTTCTTaGGGATATGGAGGCTCACTT +
Preference number: 4 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNKALIS*GYGGSL
Trigger: AAGTGAGCCTCCATATCCCCAAGAAATGAGTGCTTT...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR CCA 90 bp AAGTTACTCACATCTAATTCATCTCGAATGACTGGCTTAAATGGTGCAGGCACTTTCATCTGCATCACGTaGACCACATCCCAATCTCTT +
Preference number: 4 (lower is better)
Translates to: KLLTSNSSRMTGLNGAGTFICIT*TTSQSL
Trigger: AAGAGATTGGGATGTGGTCCACGTGATGCAGATGAA...AGTGCCTGCACCATTTAAGCCAGTCATTCGAGATGAATTAGATGTGAGTAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CCA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATGCAACTTCACAATATTaGGGTGTCCTTCACAGAGTT +
Preference number: 4 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNATSQY*GVLHRV
Trigger: AACTCTGTGAAGGACACCCCAATATTGTGAAGTTGC...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR CCA 90 bp TGTTGGCATCATGCTAGGTTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTACTGATTCAAGAGCTCTaGGGCGGCATAATGAAGGGT +
Preference number: 4 (lower is better)
Translates to: CWHHARLLKRVICALFTVLIQEL*GGIMKG
Trigger: ACCCTTCATTATGCCGCCCCAGAGCTCTTGAATCAG...TACTGTGAATAGAGCACATATTACTCTTTTTAGCAACCTAGCATGATGCCAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp TTCAACTCCCATGTGAAACTGAAGAGGGTCTATGACAGCTGCATTACGCTTGAAACTGTGAGAAGTCCTTaGATCAAATCTTTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: FNSHVKLKRVYDSCITLETVRSP*IKSLAS
Trigger: AGAGGCTAAAGATTTGATCCAAGGACTTCTCACAGT...TTCAAGCGTAATGCAGCTGTCATAGACCCTCTTCAGTTTCACATGGGAGTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CCA 90 bp AGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACTGATACATTTAAGCCTTTTGTTTaGATCTACTGTGAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: RSPQAYAEGIKVQWITDTFKPFV*IYCEKS
Trigger: GGACTTCTCACAGTAGATCCAAACAAAAGGCTTAAA...TGTATCAGTGATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp AAGCATAAAAGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCTATTTGTTAAAGGCGTaGAAGGTTGCTTTCACACAG +
Preference number: 4 (lower is better)
Translates to: KHKRSPQAYAEGIKVQWIYLLKA*KVAFTQ
Trigger: CTGTGTGAAAGCAACCTTCCACGCCTTTAACAAATA...GATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCTTTTATGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp GAAAACAGACCCCTTTCTCTGATAAATCATTGTTTGAAGGGTGCAAATTTCAAAACTGAGTCCGAGAACTaGAAGAGGGTCTCCGGGTTA +
Preference number: 4 (lower is better)
Translates to: ENRPLSLINHCLKGANFKTESEN*KRVSGL
Trigger: TAACCCGGAGACCCTCTTCCAGTTCTCGGACTCAGT...TTTGAAATTTGCACCCTTCAAACAATGATTTATCAGAGAAAGGGGTCTGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp AAGCATAAAAGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCTTGTTGGCAGACATCTaGAAAACCTGTGACTTACAA +
Preference number: 4 (lower is better)
Translates to: KHKRSPQAYAEGIKVQWILLADI*KTCDLQ
Trigger: TTGTAAGTCACAGGTTTTCCAGATGTCTGCCAACAA...GATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCTTTTATGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp TCACTATCTATATGTAGTTTTAGTGCTCCATTTGGACTGGTCTCTGGCCACTGGTTGTTGGCAGACATCTaGAAAACCTGTGACTTACAA +
Preference number: 4 (lower is better)
Translates to: SLSICSFSAPFGLVSGHWLLADI*KTCDLQ
Trigger: TTGTAAGTCACAGGTTTTCCAGATGTCTGCCAACAA...CCAGTGGCCAGAGACCAGTCCAAATGGAGCACTAAAACTACATATAGATAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp AAGCATAAAAGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCCCCGAATACAGAGTATaGGACCTTGAGTTCTTATAT +
Preference number: 4 (lower is better)
Translates to: KHKRSPQAYAEGIKVQWIPEYRV*DLEFLY
Trigger: ATATAAGAACTCAAGGTCCCATACTCTGTATTCGGG...GATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCTTTTATGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp AGATGTTCTTTGATTTCATCTGCATCACGTGGACCACATCCCAATCTCTTCTTGAGCATGCATCTCAGATaGATCCCGAATACAGAGTAT +
Preference number: 4 (lower is better)
Translates to: RCSLISSASRGPHPNLFLSMHLR*IPNTEY
Trigger: ATACTCTGTATTCGGGATCCATCTGAGATGCATGCT...CAAGAAGAGATTGGGATGTGGTCCACGTGATGCAGATGAAATCAAAGAACATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648062.1
CDS-3UTR CCA 90 bp AAACATTTCCTATTTTGCACTAGGGTGAAGAAACCAAGACACAAACATTTGGAAGTGCTCCATTTGGACTaGTCTCTGGCCACTGGATGT +
Preference number: 4 (lower is better)
Translates to: KHFLFCTRVKKPRHKHLEVLHLD*SLATGC
Trigger: ACATCCAGTGGCCAGAGACCAGTCCAAATGGAGCAC...TTCCAAATGTTTGTGTCTTGGTTTCTTCACCCTAGTGCAAAATAGGAAATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp TGTTGGCATCATGCTAGGTTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAGTAATCCCAGCTACCTaGGAGGCTGAGACACAAGAA +
Preference number: 4 (lower is better)
Translates to: CWHHARLLKRVICALFTVVIPAT*EAETQE
Trigger: TTCTTGTGTCTCAGCCTCCCAGGTAGCTGGGATTAC...TACTGTGAATAGAGCACATATTACTCTTTTTAGCAACCTAGCATGATGCCAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp TCACTATCTATATGTAGTTTTAGTGCTCCATTTGGACTGGTCTCTGGCCACTGGAGCAGTAATCCCACTTaGTTGAAGAGACAAAAGTTG +
Preference number: 4 (lower is better)
Translates to: SLSICSFSAPFGLVSGHWSSNPT*LKRQKL
Trigger: CAACTTTTGTCTCTTCAACCAAGTGGGATTACTGCT...CCAGTGGCCAGAGACCAGTCCAAATGGAGCACTAAAACTACATATAGATAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp TTGATCCTTGATGTGAGAATAACTGTATTCCTTGCATGTTCAGAATGTCCTTATGGTGTGGTGCGATCTTaGCTCACTGCAAGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LILDVRITVFLACSECPYGVVRS*LTASSA
Trigger: AGCAGAACTTGCAGTGAGCCAAGATCGCACCACACC...ATAAGGACATTCTGAACATGCAAGGAATACAGTTATTCTCACATCAAGGATCAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp TCACTATCTATATGTAGTTTTAGTGCTCCATTTGGACTGGTCTCTGGCCACTGGCATTCTACCCATCTTTaGAATCAGTGTACCTTATGG +
Preference number: 4 (lower is better)
Translates to: SLSICSFSAPFGLVSGHWHSTHL*NQCTLW
Trigger: CCATAAGGTACACTGATTCCAAAGATGGGTAGAATG...CCAGTGGCCAGAGACCAGTCCAAATGGAGCACTAAAACTACATATAGATAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp GAAAACAGACCCCTTTCTCTGATAAATCATTGTTTGAAGGGTGCAAATTTCAAACTGGGAAGGGATCTGTaGGCTTTCTACAAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: ENRPLSLINHCLKGANFKLGRDL*AFYKGA
Trigger: TGCTCCCTTGTAGAAAGCCCACAGATCCCTTCCCAG...TTTGAAATTTGCACCCTTCAAACAATGATTTATCAGAGAAAGGGGTCTGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp AAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATTTCTTACCTGGCAGCTaGCACCACATTAGAATCTCC +
Preference number: 4 (lower is better)
Translates to: KAKQKVSSQYESFLVGRHFLPGS*HHIRIS
Trigger: GGAGATTCTAATGTGGTGCCAGCTGCCAGGTAAGAA...ATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp ACCCACATTGTCCACAAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTGCAACGAAGGGAACATaGAACATTAGCCCTCCTAAA +
Preference number: 4 (lower is better)
Translates to: THIVHKAKQKVSSQYESFATKGT*NISPPK
Trigger: TTTAGGAGGGCTAATGTTCCATGTTCCCTTCGTTGC...AAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTTGTGGACAATGTGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR CAA 72 bp TATGATCACTATCTATATGTAGTTTTAGTGCTCCATTaGGACTGGTCTCTGGCCACTGGATGTCAGTGTTTG +
Preference number: 4 (lower is better)
Translates to: YDHYLYVVLVLH*DWSLATGCQCL
Trigger: CAAACACTGACATCCAGTGGCCAGAGACCAGTCCAAATGGAGCACTAAAACTACATATAGATAGTGATCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR CAA 72 bp AATAAATACCTAGCAGCAAGCAGTAATCCCACTTGGTaGAAGAGACAAAAGTTGGAGCTTGGGAAAGTAGCT +
Preference number: 4 (lower is better)
Translates to: NKYLAASSNPTW*KRQKLELGKVA
Trigger: AGCTACTTTCCCAAGCTCCAACTTTTGTCTCTTCAACCAAGTGGGATTACTGCTTGCTGCTAGGTATTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp AAGCATAAAAGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCTTCATCAAAAGACGCTaGATTAGGTCTTTCGCTAAA +
Preference number: 4 (lower is better)
Translates to: KHKRSPQAYAEGIKVQWIFIKRR*IRSFAK
Trigger: TTTAGCGAAAGACCTAATTCAGCGTCTTTTGATGAA...GATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCTTTTATGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR TCA 90 bp TTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCCAGCTGCATTACGCTTaGATAGGATGGAAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: LLKRVICALFTVTFSVQCQLHYA*IGWKEQ
Trigger: TTGCTCCTTCCATCCTATTCAAGCGTAATGCAGCTG...GCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTTAGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR TCA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATACACTTTCGACAAATTaGAAAACTACCTTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNTLSTN*KTTFSQ
Trigger: CTGGGAGAAGGTAGTTTTTCAATTTGTCGAAAGTGT...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR TCA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATGCTGTTATTTCCTTTTaGGTATTGGCTTCCATCCTT +
Preference number: 4 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNAVISF*VLASIL
Trigger: AAGGATGGAAGCCAATACTCAAAAGGAAATAACAGC...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR TCA 90 bp AGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATCTGGAAACATGTGGCTTACAGCTaGAACAAGCTTCCTCATGAT +
Preference number: 4 (lower is better)
Translates to: SKRYHHSMSHFLLADIWKHVAYS*NKLPHD
Trigger: ATCATGAGGAAGCTTGTTTCAGCTGTAAGCCACATG...TTTCCAGATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR TCA 90 bp ACCCACATTGTCCACAAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTGAAGGGAACCTGTCCTaGCAACATTGTGTACAAAAT +
Preference number: 4 (lower is better)
Translates to: THIVHKAKQKVSSQYESFEGNLS*QHCVQN
Trigger: ATTTTGTACACAATGTTGTCAGGACAGGTTCCCTTC...AAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTTGTGGACAATGTGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR TCA 90 bp CCATCAACAGTGAAAGGAGATGCTCCAGTTAGTAATTCATACATTAGAACACCCCATCTGGAAAACCTGTaGCTTACAAGCAGCTCAAAT +
Preference number: 4 (lower is better)
Translates to: PSTVKGDAPVSNSYIRTPHLENL*LTSSSN
Trigger: ATTTGAGCTGCTTGTAAGTCACAGGTTTTCCAGATG...GGGTGTTCTAATGTATGAATTACTAACTGGAGCATCTCCTTTCACTGTTGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648062.1
CDS-3UTR TCA 90 bp TCACTATCTATATGTAGTTTTAGTGCTCCATTTGGACTGGTCTCTGGCCACTGGATATGGTCATTTTCTTaGTTACTAGAGATCTGTGCC +
Preference number: 4 (lower is better)
Translates to: SLSICSFSAPFGLVSGHWIWSFS*LLEICA
Trigger: GGCACAGATCTCTAGTAATCAAGAAAATGACCATAT...CCAGTGGCCAGAGACCAGTCCAAATGGAGCACTAAAACTACATATAGATAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp GAAAACAGACCCCTTTCTCTGATAAATCATTGTTTGAAGGGTGCAAATTTCAAAGCCTCGCTAATGTGGTaGAGCCCCATCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: ENRPLSLINHCLKGANFKASLMW*SPISTK
Trigger: TTTAGTAGAGATGGGGCTTCACCACATTAGCGAGGC...TTTGAAATTTGCACCCTTCAAACAATGATTTATCAGAGAAAGGGGTCTGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp AAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATAAACATACAGCACTTTaGCATCTGTCCGAGCACTAC +
Preference number: 4 (lower is better)
Translates to: KAKQKVSSQYESFLVGRHKHTAL*HLSEHY
Trigger: GTAGTGCTCGGACAGATGTCAAAGTGCTGTATGTTT...ATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp CATGACACAACATGCCCCATTCTACTTGTTGCATACAAAGTAGAAGAGGAATGTTTCCAGTTTGCCACATaGAAGGCATACTTCCAACTT +
Preference number: 4 (lower is better)
Translates to: HDTTCPILLVAYKVEEECFQFAT*KAYFQL
Trigger: AAGTTGGAAGTATGCCTTTCATGTGGCAAACTGGAA...ACATTCCTCTTCTACTTTGTATGCAACAAGTAGAATGGGGCATGTTGTGTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp TTGTTTGAAGGGTGCAAATTTCAAAAACCCACATTGTCCACAAGGCAAAGCAAAGATTCTCGTATGTGCTaGAAACACTGCTATGACGAC +
Preference number: 4 (lower is better)
Translates to: LFEGCKFQKPTLSTRQSKDSRMC*KHCYDD
Trigger: GTCGTCATAGCAGTGTTTTCAGCACATACGAGAATC...TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAATTTGCACCCTTCAAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp AGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATCTGGAAATTGCTTACCAGCCATTaGCCTGAAATGAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: SKRYHHSMSHFLLADIWKLLTSH*PEMNCF
Trigger: GAAGCAGTTCATTTCAGGTCAATGGCTGGTAAGCAA...TTTCCAGATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp TTGTTTGAAGGGTGCAAATTTCAAAAACCCACATTGTCCACAAGGCAAAGCAAACGTTCTGTCCTTGTATaGTCTGTGGTTTTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: LFEGCKFQKPTLSTRQSKRSVLV*SVVLAF
Trigger: AAAGGCCAAAACCACAGAGCATACAAGGACAGAACG...TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAATTTGCACCCTTCAAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR GCA 90 bp CAATATTGGGGTGTCCTTCACAGAGTTTCAGAGCTGTTATTTCCTTTTGAGTATCGTTCTGTCCTTGTATaGTCTGTGGTTTTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: QYWGVLHRVSELLFPFEYRSVLV*SVVLAF
Trigger: AAAGGCCAAAACCACAGAGCATACAAGGACAGAACG...ATACTCAAAAGGAAATAACAGCTCTGAAACTCTGTGAAGGACACCCCAATATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR GCA 90 bp TGCCTTTTTCAAAACTTTCATGGCATACAGCTTTCCAGTATCATGGCCACTTATCGTTCTGTCCTTGTATaGTCTGTGGTTTTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: CLFQNFHGIQLSSIMATYRSVLV*SVVLAF
Trigger: AAAGGCCAAAACCACAGAGCATACAAGGACAGAACG...ATAAGTGGCCATGATACTGGAAAGCTGTATGCCATGAAAGTTTTGAAAAAGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000556594.1
CDS-3UTR GCA 90 bp TGTCCTTCAAATCTAGGTCATAGTGTTGATAGAATGGAGAGTCCTTCATCATTGACCAAAAATGGCGACTaGCTAATGTGTTCCAGGACT +
Preference number: 4 (lower is better)
Translates to: CPSNLGHSVDRMESPSSLTKNGD*LMCSRT
Trigger: AGTCCTGGAACACATTAGGCAGTCGCCATTTTTGGT...CAATGATGAAGGACTCTCCATTCTATCAACACTATGACCTAGATTTGAAGGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR GCA 90 bp ACCCACATTGTCCACAAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTTCCGTCTCACTGAAGTaGTTCTTTTTCTTAATGCGC +
Preference number: 4 (lower is better)
Translates to: THIVHKAKQKVSSQYESFSVSLK*FFFLMR
Trigger: GCGCATTAAGAAAAAGAAGCACTTCAGTGAGACGGA...AAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTTGTGGACAATGTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR GCA 90 bp CAAGCCAGACATTTTAAGCCTTTTGTTTGGATCTACTGTGAGAAGTCCTTGGATTCCGTCTCACTGAAGTaGTTCTTTTTCTTAATGCGC +
Preference number: 4 (lower is better)
Translates to: QARHFKPFVWIYCEKSLDSVSLK*FFFLMR
Trigger: GCGCATTAAGAAAAAGAAGCACTTCAGTGAGACGGA...ATCCAAGGACTTCTCACAGTAGATCCAAACAAAAGGCTTAAAATGTCTGGCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR GCA 90 bp CAATATTGGGGTGTCCTTCACAGAGTTTCAGAGCTGTTATTTCCTTTTGAGTATACCACTCCAACATCATaGATGTGGCTTACAGCTGAA +
Preference number: 4 (lower is better)
Translates to: QYWGVLHRVSELLFPFEYTTPTS*MWLTAE
Trigger: TTCAGCTGTAAGCCACATGCATGATGTTGGAGTGGT...ATACTCAAAAGGAAATAACAGCTCTGAAACTCTGTGAAGGACACCCCAATATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR GCA 90 bp TGTCCTTCAAATCTAGGTCATAGTGTTGATAGAATGGAGAGTCCTTCATCATTGACACATAGCTTAGCATaGATCTCAGATGGATCCCGA +
Preference number: 4 (lower is better)
Translates to: CPSNLGHSVDRMESPSSLTHSLA*ISDGSR
Trigger: TCGGGATCCATCTGAGATGCATGCTAAGCTATGTGT...CAATGATGAAGGACTCTCCATTCTATCAACACTATGACCTAGATTTGAAGGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648062.1
CDS-3UTR GCA 90 bp CATGACACAACATGCCCCATTCTACTTGTTGCATACAAAGTAGAAGAGGAATGTTTAGGAATAACTGAATaGCTACCACAGCAACAGAGC +
Preference number: 4 (lower is better)
Translates to: HDTTCPILLVAYKVEEECLGITE*LPQQQS
Trigger: GCTCTGTTGCTGTGGTAGGCATTCAGTTATTCCTAA...ACATTCCTCTTCTACTTTGTATGCAACAAGTAGAATGGGGCATGTTGTGTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp ACCCACATTGTCCACAAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTACTTCTTCAAGGCACTaGAAATTCACAACACAGGGA +
Preference number: 4 (lower is better)
Translates to: THIVHKAKQKVSSQYESFTSSRH*KFTTQG
Trigger: TCCCTGTGTTGTGAATTTGCAGTGCCTTGAAGAAGT...AAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTTGTGGACAATGTGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp AAGCATAAAAGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCAATATTTCAGCTAACTaGACAAATGAGCCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: KHKRSPQAYAEGIKVQWINISAN*TNEPAS
Trigger: AGAAGCAGGCTCATTTGTGCAGTTAGCTGAAATATT...GATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCTTTTATGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp AAGCATAAAAGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCTTCATCTCTTTGCTTTaGCAGGAACAAAGTTTCAAG +
Preference number: 4 (lower is better)
Translates to: KHKRSPQAYAEGIKVQWIFISLL*QEQSFK
Trigger: CTTGAAACTTTGTTCCTGGCAAAGCAAAGAGATGAA...GATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCTTTTATGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp GATGAATTAGCTACTGCTTATCAGGCAACTAACAGAGCCGGCAACAGAAAGGTTAAAAATCTCATTACATaGCAGCTGAGTGACTTGCAA +
Preference number: 4 (lower is better)
Translates to: DELATAYQATNRAGNRKVKNLIT*QLSDLQ
Trigger: TTGCAAGTCACTCAGCTGGCATGTAATGAGATTTTT...AACCTTTCTGTTGCCGGCTCTGTTAGTTGCCTGATAAGCAGTAGCTAATTCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATTATGCTCTGTGGTTTTaGCCTTTTGAACGATTGTTG +
Preference number: 4 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNYALWF*PFERLL
Trigger: CAACAATCGTTCAAAAGGCCAAAACCACAGAGCATA...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR CCA 90 bp TCATGTCCTGAATCTCCCCCTCTGACAATATCTGGTGCCATGTATTCAATAGTTTATGCTCTGTGGTTTTaGCCTTTTGAACGATTGTTG +
Preference number: 4 (lower is better)
Translates to: SCPESPPLTISGAMYSIVYALWF*PFERLL
Trigger: CAACAATCGTTCAAAAGGCCAAAACCACAGAGCATA...AACTATTGAATACATGGCACCAGATATTGTCAGAGGGGGAGATTCAGGACATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CCA 90 bp ACCCACATTGTCCACAAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTTCCTTGTATGCTCTGTaGTTTTGGCCTTTTGAACGA +
Preference number: 4 (lower is better)
Translates to: THIVHKAKQKVSSQYESFSLYAL*FWPFER
Trigger: TCGTTCAAAAGGCCAAAACCACAGAGCATACAAGGA...AAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTTGTGGACAATGTGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp TCAACAGTGAAAGGAGATGCTCCAGTTAGTAATTCATACATTAGAACACCCAAAATAATCCCCAACTTGTaGAGATGTTCGAGGGCAAGC +
Preference number: 4 (lower is better)
Translates to: STVKGDAPVSNSYIRTPKIIPNL*RCSRAS
Trigger: GCTTGCCCTCGAACATCTCCACAAGTTGGGGATTAT...TTTGGGTGTTCTAATGTATGAATTACTAACTGGAGCATCTCCTTTCACTGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554206.1
ENST00000648062.1
CDS-3UTR CCA 90 bp ACCCACATTGTCCACAAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTTCTGTCAGCACCACATaGCCATTAGAATCAAGTAGA +
Preference number: 4 (lower is better)
Translates to: THIVHKAKQKVSSQYESFSVSTT*PLESSR
Trigger: TCTACTTGATTCTAATGGCCATGTGGTGCTGACAGA...AAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTTGTGGACAATGTGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp CTTCACAATATTGGGGTGTCCTTCACAGAGTTTCAGAGCTGTTATTTCCTTTTGTCTGTCAGCACCACATaGCCATTAGAATCAAGTAGA +
Preference number: 4 (lower is better)
Translates to: LHNIGVSFTEFQSCYFLLSVSTT*PLESSR
Trigger: TCTACTTGATTCTAATGGCCATGTGGTGCTGACAGA...CAAAAGGAAATAACAGCTCTGAAACTCTGTGAAGGACACCCCAATATTGTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CCA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATCCCTCTGACAATATCTaGTGCCATGTATTCAATAGT +
Preference number: 4 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNPSDNI*CHVFNS
Trigger: ACTATTGAATACATGGCACCAGATATTGTCAGAGGG...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR CCA 90 bp AAGTTACTCACATCTAATTCATCTCGAATGACTGGCTTAAATGGTGCAGGCACTAAAGCACTCATTTCTTaGGGATATGGAGGCTCACTT +
Preference number: 4 (lower is better)
Translates to: KLLTSNSSRMTGLNGAGTKALIS*GYGGSL
Trigger: AAGTGAGCCTCCATATCCCCAAGAAATGAGTGCTTT...AGTGCCTGCACCATTTAAGCCAGTCATTCGAGATGAATTAGATGTGAGTAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CCA 90 bp AAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATTTCATCTGCATCACGTaGACCACATCCCAATCTCTT +
Preference number: 4 (lower is better)
Translates to: KAKQKVSSQYESFLVGRHFICIT*TTSQSL
Trigger: AAGAGATTGGGATGTGGTCCACGTGATGCAGATGAA...ATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp GTGAACTCTTCTGCAAAGTTACTCACATCTAATTCATCTCGAATGACTGGCTTATTCATCTCGAATGACTaGCTTAAATGGTGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: VNSSAKLLTSNSSRMTGLFISND*LKWCRH
Trigger: GTGCCTGCACCATTTAAGCCAGTCATTCGAGATGAA...TAAGCCAGTCATTCGAGATGAATTAGATGTGAGTAACTTTGCAGAAGAGTTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CCA 90 bp TTTTCTCCATCAACAGTGAAAGGAGATGCTCCAGTTAGTAATTCATACATTAGACTGATTCAAGAGCTCTaGGGCGGCATAATGAAGGGT +
Preference number: 4 (lower is better)
Translates to: FSPSTVKGDAPVSNSYIRLIQEL*GGIMKG
Trigger: ACCCTTCATTATGCCGCCCCAGAGCTCTTGAATCAG...TCTAATGTATGAATTACTAACTGGAGCATCTCCTTTCACTGTTGATGGAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CCA 90 bp TTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCGAGTCATCAGAGGATTaGAGGACAGCTGACTTCCAT +
Preference number: 4 (lower is better)
Translates to: LLKRVICALFTVTFSVQCESSED*RTADFH
Trigger: ATGGAAGTCAGCTGTCCTCCAATCCTCTGATGACTC...GCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTTAGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp TCAGGGGCTGATTATCCGGTGGCTTTAGCCGTGCAAATCCAAAATCAATTATTTTATTTGTTAAAGGCGTaGAAGGTTGCTTTCACACAG +
Preference number: 4 (lower is better)
Translates to: SGADYPVALAVQIQNQLFYLLKA*KVAFTQ
Trigger: CTGTGTGAAAGCAACCTTCCACGCCTTTAACAAATA...AAATAATTGATTTTGGATTTGCACGGCTAAAGCCACCGGATAATCAGCCCCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CCA 90 bp TACCTTCTCCCAGGGGTTTGTCCTTCAAATCTAGGTCATAGTGTTGATAGAATGTATTTGTTAAAGGCGTaGAAGGTTGCTTTCACACAG +
Preference number: 4 (lower is better)
Translates to: YLLPGVCPSNLGHSVDRMYLLKA*KVAFTQ
Trigger: CTGTGTGAAAGCAACCTTCCACGCCTTTAACAAATA...CATTCTATCAACACTATGACCTAGATTTGAAGGACAAACCCCTGGGAGAAGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CCA 90 bp CATGACACAACATGCCCCATTCTACTTGTTGCATACAAAGTAGAAGAGGAATGTAGCATGCATCTCAGATaGATCCCGAATACAGAGTAT +
Preference number: 4 (lower is better)
Translates to: HDTTCPILLVAYKVEEECSMHLR*IPNTEY
Trigger: ATACTCTGTATTCGGGATCCATCTGAGATGCATGCT...ACATTCCTCTTCTACTTTGTATGCAACAAGTAGAATGGGGCATGTTGTGTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp AGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACTGATACATGTTTCACTTTTAAGTaGACACACAAGAGAAATGAG +
Preference number: 4 (lower is better)
Translates to: RSPQAYAEGIKVQWITDTCFTFK*THKRNE
Trigger: CTCATTTCTCTTGTGTGTCCACTTAAAAGTGAAACA...TGTATCAGTGATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp TGTTGGCATCATGCTAGGTTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAGCTGGCAAGTATTCTTaGGGCAAACAGGAAAAGGGT +
Preference number: 4 (lower is better)
Translates to: CWHHARLLKRVICALFTVAGKYS*GKQEKG
Trigger: ACCCTTTTCCTGTTTGCCCCAAGAATACTTGCCAGC...TACTGTGAATAGAGCACATATTACTCTTTTTAGCAACCTAGCATGATGCCAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp AAGCATAAAAGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCAATATTGATGTAGTGTaGGTGAACTGTGAACTGCAT +
Preference number: 4 (lower is better)
Translates to: KHKRSPQAYAEGIKVQWINIDVV*VNCELH
Trigger: ATGCAGTTCACAGTTCACCCACACTACATCAATATT...GATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCTTTTATGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp TGTTGGCATCATGCTAGGTTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAGGAGTTTCTCCCTTTTaGTCAGGCTGTTCTCCAACT +
Preference number: 4 (lower is better)
Translates to: CWHHARLLKRVICALFTVGVSPF*SGCSPT
Trigger: AGTTGGAGAACAGCCTGACCAAAAGGGAGAAACTCC...TACTGTGAATAGAGCACATATTACTCTTTTTAGCAACCTAGCATGATGCCAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp ACCCACATTGTCCACAAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTCTAAAACAGTGCACTTaGTGGCTACATACGGCTAAT +
Preference number: 4 (lower is better)
Translates to: THIVHKAKQKVSSQYESFLKQCT*WLHTAN
Trigger: ATTAGCCGTATGTAGCCACCAAGTGCACTGTTTTAG...AAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTTGTGGACAATGTGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp AACTCTTCTGCAAAGTTACTCACATCTAATTCATCTCGAATGACTGGCTTAAATGCACCTCATGCTCTGTaGAACGCTCTCTTTGAGAAA +
Preference number: 4 (lower is better)
Translates to: NSSAKLLTSNSSRMTGLNAPHAL*NALFEK
Trigger: TTTCTCAAAGAGAGCGTTTCACAGAGCATGAGGTGC...ATTTAAGCCAGTCATTCGAGATGAATTAGATGTGAGTAACTTTGCAGAAGAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554206.1
ENST00000648062.1
CDS-3UTR TCA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATTTCATCAAAAGACGCTaGATTAGGTCTTTCGCTAAA +
Preference number: 4 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNFIKRR*IRSFAK
Trigger: TTTAGCGAAAGACCTAATTCAGCGTCTTTTGATGAA...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR TCA 90 bp AGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATCTGGAAATGGGATCCATTTCTGTaGACTCTTCTGCAAAGTTAC +
Preference number: 4 (lower is better)
Translates to: SKRYHHSMSHFLLADIWKWDPFL*TLLQSY
Trigger: GTAACTTTGCAGAAGAGTTCACAGAAATGGATCCCA...TTTCCAGATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR TCA 90 bp AAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCTTTTGCAGCTGCATTACGCTTaGATAGGATGGAAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: KKSNMCSIHSNILCPVLLQLHYA*IGWKEQ
Trigger: TTGCTCCTTCCATCCTATTCAAGCGTAATGCAGCTG...CAAAAGCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR TCA 90 bp ACCCACATTGTCCACAAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTACACTTTCGACAAATTaGAAAACTACCTTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: THIVHKAKQKVSSQYESFTLSTN*KTTFSQ
Trigger: CTGGGAGAAGGTAGTTTTTCAATTTGTCGAAAGTGT...AAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTTGTGGACAATGTGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR TCA 90 bp AAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCTTTTGAAACAAGCTTCCTCATaGTGTAGCTGGCTTCCGTCT +
Preference number: 4 (lower is better)
Translates to: KKSNMCSIHSNILCPVLLKQASS*CSWLPS
Trigger: AGACGGAAGCCAGCTACATCATGAGGAAGCTTGTTT...CAAAAGCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR TCA 90 bp AACTCTTCTGCAAAGTTACTCACATCTAATTCATCTCGAATGACTGGCTTAAATAAACAAGCTTCCTCATaGTGTAGCTGGCTTCCGTCT +
Preference number: 4 (lower is better)
Translates to: NSSAKLLTSNSSRMTGLNKQASS*CSWLPS
Trigger: AGACGGAAGCCAGCTACATCATGAGGAAGCTTGTTT...ATTTAAGCCAGTCATTCGAGATGAATTAGATGTGAGTAACTTTGCAGAAGAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR TCA 90 bp TTGTTTGAAGGGTGCAAATTTCAAAAACCCACATTGTCCACAAGGCAAAGCAAAGAAGGGAACCTGTCCTaGCAACATTGTGTACAAAAT +
Preference number: 4 (lower is better)
Translates to: LFEGCKFQKPTLSTRQSKEGNLS*QHCVQN
Trigger: ATTTTGTACACAATGTTGTCAGGACAGGTTCCCTTC...TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAATTTGCACCCTTCAAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR TCA 90 bp TCTGCAAAGTTACTCACATCTAATTCATCTCGAATGACTGGCTTAAATGGTGCAGAAGGGAACCTGTCCTaGCAACATTGTGTACAAAAT +
Preference number: 4 (lower is better)
Translates to: SAKLLTSNSSRMTGLNGAEGNLS*QHCVQN
Trigger: ATTTTGTACACAATGTTGTCAGGACAGGTTCCCTTC...TGCACCATTTAAGCCAGTCATTCGAGATGAATTAGATGTGAGTAACTTTGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR TCA 90 bp AAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCTTTTGGCCTTATCAACATTCTaGAGGCAAAACCCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: KKSNMCSIHSNILCPVLLALSTF*RQNPSL
Trigger: GAGAGAGGGGTTTTGCCTTCAGAATGTTGATAAGGC...CAAAAGCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR TCA 90 bp TTGTTTGAAGGGTGCAAATTTCAAAAACCCACATTGTCCACAAGGCAAAGCAAACATCTGGAAAACCTGTaGCTTACAAGCAGCTCAAAT +
Preference number: 4 (lower is better)
Translates to: LFEGCKFQKPTLSTRQSKHLENL*LTSSSN
Trigger: ATTTGAGCTGCTTGTAAGTCACAGGTTTTCCAGATG...TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAATTTGCACCCTTCAAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR TCA 90 bp TACCTTCTCCCAGGGGTTTGTCCTTCAAATCTAGGTCATAGTGTTGATAGAATGAATCCCCAACTAAAATaGGATGAAGTTTGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: YLLPGVCPSNLGHSVDRMNPQLK*DEVWFL
Trigger: CAGAAACCAAACTTCATCTCATTTTAGTTGGGGATT...CATTCTATCAACACTATGACCTAGATTTGAAGGACAAACCCCTGGGAGAAGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000556178.5
CDS-3UTR TCA 90 bp TTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCTGGGTAATGAACCTGTaGCTCCAAGACAGACAACAA +
Preference number: 4 (lower is better)
Translates to: LLKRVICALFTVTFSVQCWVMNL*LQDRQQ
Trigger: TTGTTGTCTGTCTTGGAGTCACAGGTTCATTACCCA...GCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTTAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp AAACATTTCCTATTTTGCACTAGGGTGAAGAAACCAAGACACAAACATTTGGAAACAATAACAGGCGCTTaGAATGGGGGCAAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: KHFLFCTRVKKPRHKHLETITGA*NGGKVN
Trigger: ATTCACCTTGCCCCCATTTCAAGCGCCTGTTATTGT...TTCCAAATGTTTGTGTCTTGGTTTCTTCACCCTAGTGCAAAATAGGAAATGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp AAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCTTTTGCAAAGGCAACTCATTTaGGCTGAGGCTTGGCTATAC +
Preference number: 4 (lower is better)
Translates to: KKSNMCSIHSNILCPVLLQRQLI*AEAWLY
Trigger: GTATAGCCAAGCCTCAGCTCAAATGAGTTGCCTTTG...CAAAAGCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp CATGACACAACATGCCCCATTCTACTTGTTGCATACAAAGTAGAAGAGGAATGTGACACACAAGAGAAATaGGTGTACGTGTCCATTAAA +
Preference number: 4 (lower is better)
Translates to: HDTTCPILLVAYKVEEECDTQEK*VYVSIK
Trigger: TTTAATGGACACGTACACTCATTTCTCTTGTGTGTC...ACATTCCTCTTCTACTTTGTATGCAACAAGTAGAATGGGGCATGTTGTGTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp AAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCTTTTGTCCCGGCTAAAACGGTaGAACCCCATCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: KKSNMCSIHSNILCPVLLSRLKR*NPISTK
Trigger: TTTAGTAGAGATGGGGTTTCACCGTTTTAGCCGGGA...CAAAAGCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp AGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATCTGGAAAACAGCACCAAATGACTaGCAACAGACAATGGAAACA +
Preference number: 4 (lower is better)
Translates to: SKRYHHSMSHFLLADIWKTAPND*QQTMET
Trigger: TGTTTCCATTGTCTGTTGTCAGTCATTTGGTGCTGT...TTTCCAGATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp TTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCGTAATCCCACTTGGTTaGAGAGACAAAAGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: LLKRVICALFTVTFSVQCVIPLG*RDKSWS
Trigger: GCTCCAACTTTTGTCTCTTCAACCAAGTGGGATTAC...GCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTTAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp AGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATCTGGAAAATAATGGGAAAAGTATaGTTCCCAAGGAGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: SKRYHHSMSHFLLADIWKIMGKV*FPRRFP
Trigger: AGGGAACCTCCTTGGGAATCATACTTTTCCCATTAT...TTTCCAGATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp ACCCACATTGTCCACAAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTGCTATGACGACAGTTTaGTCTGATCATCTATGCATT +
Preference number: 4 (lower is better)
Translates to: THIVHKAKQKVSSQYESFAMTTV*SDHLCI
Trigger: AATGCATAGATGATCAGATCAAACTGTCGTCATAGC...AAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTTGTGGACAATGTGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp TTGTTTGAAGGGTGCAAATTTCAAAAACCCACATTGTCCACAAGGCAAAGCAAACTGAAAACACTGCTATaGCGACAGTTTGATCTGATC +
Preference number: 4 (lower is better)
Translates to: LFEGCKFQKPTLSTRQSKLKTLL*RQFDLI
Trigger: GATCAGATCAAACTGTCGTCATAGCAGTGTTTTCAG...TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAATTTGCACCCTTCAAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp GAAAACAGACCCCTTTCTCTGATAAATCATTGTTTGAAGGGTGCAAATTTCAAAACTACACAGCTGATATaGGTGGACAGCAAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: ENRPLSLINHCLKGANFKTTQLI*VDSKEL
Trigger: CAGCTCTTTGCTGTCCACTCATATCAGCTGTGTAGT...TTTGAAATTTGCACCCTTCAAACAATGATTTATCAGAGAAAGGGGTCTGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATTCCACAAAAGGAATATaGTCTTTCAGTTTCATCAGC +
Preference number: 4 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNSTKGI*SFSFIS
Trigger: GCTGATGAAACTGAAAGAGCATATTCCTTTTGTGGA...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR GCA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATTCTGACAATATCTGGTaGCATGTATTCAATAGTTCC +
Preference number: 4 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNSDNIW*HVFNSS
Trigger: GGAACTATTGAATACATGGCACCAGATATTGTCAGA...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR GCA 90 bp TCATGTCCTGAATCTCCCCCTCTGACAATATCTGGTGCCATGTATTCAATAGTTTCTGACAATATCTGGTaGCATGTATTCAATAGTTCC +
Preference number: 4 (lower is better)
Translates to: SCPESPPLTISGAMYSIVSDNIW*HVFNSS
Trigger: GGAACTATTGAATACATGGCACCAGATATTGTCAGA...AACTATTGAATACATGGCACCAGATATTGTCAGAGGGGGAGATTCAGGACATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
CDS-3UTR GCA 90 bp TGTCCTTCAAATCTAGGTCATAGTGTTGATAGAATGGAGAGTCCTTCATCATTGAGAGTCCTTCATCATTaGACTCCTGGCAACATTTGT +
Preference number: 4 (lower is better)
Translates to: CPSNLGHSVDRMESPSSLRVLHH*TPGNIC
Trigger: ACAAATGTTGCCAGGAGTGCAATGATGAAGGACTCT...CAATGATGAAGGACTCTCCATTCTATCAACACTATGACCTAGATTTGAAGGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR GCA 90 bp TTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCACCACTCCAACATCATaGATGTGGCTTACAGCTGAA +
Preference number: 4 (lower is better)
Translates to: LLKRVICALFTVTFSVQCTTPTS*MWLTAE
Trigger: TTCAGCTGTAAGCCACATGCATGATGTTGGAGTGGT...GCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTTAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR GCA 90 bp AAGCATAAAAGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCAAACATTTCCTATTTTaGACTAGGGTGAAGAAACCA +
Preference number: 4 (lower is better)
Translates to: KHKRSPQAYAEGIKVQWIKHFLF*TRVKKP
Trigger: TGGTTTCTTCACCCTAGTGCAAAATAGGAAATGTTT...GATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCTTTTATGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp AAGCATAAAAGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCCTACTAAGAACAGAATaGTATAAAGAGAACGATGTC +
Preference number: 4 (lower is better)
Translates to: KHKRSPQAYAEGIKVQWILLRTE*YKENDV
Trigger: GACATCGTTCTCTTTATAGCATTCTGTTCTTAGTAG...GATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCTTTTATGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp TTGATCCTTGATGTGAGAATAACTGTATTCCTTGCATGTTCAGAATGTCCTTATCAACCAAGTTATCAATaGCAGAAGCCACTGCGGAGA +
Preference number: 4 (lower is better)
Translates to: LILDVRITVFLACSECPYQPSYQ*QKPLRR
Trigger: TCTCCGCAGTGGCTTCTGGCATTGATAACTTGGTTG...ATAAGGACATTCTGAACATGCAAGGAATACAGTTATTCTCACATCAAGGATCAA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp AAACATTTCCTATTTTGCACTAGGGTGAAGAAACCAAGACACAAACATTTGGAAAATCTGTCCTCCCAGTaGAGCCTAGTTTCTATGGAG +
Preference number: 4 (lower is better)
Translates to: KHFLFCTRVKKPRHKHLENLSSQ*SLVSME
Trigger: CTCCATAGAAACTAGGCTGCACTGGGAGGACAGATT...TTCCAAATGTTTGTGTCTTGGTTTCTTCACCCTAGTGCAAAATAGGAAATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp TCACTATCTATATGTAGTTTTAGTGCTCCATTTGGACTGGTCTCTGGCCACTGGACATTTACAATGTCTTaGAACCATTACCACTACCTA +
Preference number: 4 (lower is better)
Translates to: SLSICSFSAPFGLVSGHWTFTMS*NHYHYL
Trigger: TAGGTAGTGGTAATGGTTGCAAGACATTGTAAATGT...CCAGTGGCCAGAGACCAGTCCAAATGGAGCACTAAAACTACATATAGATAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp GTGAACTCTTCTGCAAAGTTACTCACATCTAATTCATCTCGAATGACTGGCTTATCCTTGTATGCTCTGTaGTTTTGGCCTTTTGAACGA +
Preference number: 4 (lower is better)
Translates to: VNSSAKLLTSNSSRMTGLSLYAL*FWPFER
Trigger: TCGTTCAAAAGGCCAAAACCACAGAGCATACAAGGA...TAAGCCAGTCATTCGAGATGAATTAGATGTGAGTAACTTTGCAGAAGAGTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CCA 90 bp AGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATCTGGAAAAAAGCACTCATTTCTTaGGGATATGGAGGCTCACTT +
Preference number: 4 (lower is better)
Translates to: SKRYHHSMSHFLLADIWKKALIS*GYGGSL
Trigger: AAGTGAGCCTCCATATCCCCAAGAAATGAGTGCTTT...TTTCCAGATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp TCTGCAAAGTTACTCACATCTAATTCATCTCGAATGACTGGCTTAAATGGTGCAAAAGCACTCATTTCTTaGGGATATGGAGGCTCACTT +
Preference number: 4 (lower is better)
Translates to: SAKLLTSNSSRMTGLNGAKALIS*GYGGSL
Trigger: AAGTGAGCCTCCATATCCCCAAGAAATGAGTGCTTT...TGCACCATTTAAGCCAGTCATTCGAGATGAATTAGATGTGAGTAACTTTGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CCA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATATAGTGTTGATAGAATaGAGAGTCCTTCATCATTGC +
Preference number: 4 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNIVLIE*RVLHHC
Trigger: GCAATGATGAAGGACTCTCCATTCTATCAACACTAT...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR CCA 90 bp AGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATCTGGAAAGCAACTTCACAATATTaGGGTGTCCTTCACAGAGTT +
Preference number: 4 (lower is better)
Translates to: SKRYHHSMSHFLLADIWKATSQY*GVLHRV
Trigger: AACTCTGTGAAGGACACCCCAATATTGTGAAGTTGC...TTTCCAGATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATAACTTCCCCCATGTTTaGGAGATCTTTAATAATGGT +
Preference number: 4 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNNFPHV*EIFNNG
Trigger: ACCATTATTAAAGATCTCCCAAACATGGGGGAAGTT...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR CCA 90 bp AAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCTTTTGATGAAGGGTGAAGCATaGAGTCTTCAGGGGCTGATT +
Preference number: 4 (lower is better)
Translates to: KKSNMCSIHSNILCPVLLMKGEA*SLQGLI
Trigger: AATCAGCCCCTGAAGACTCCATGCTTCACCCTTCAT...CAAAAGCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp TTGATCCTTGATGTGAGAATAACTGTATTCCTTGCATGTTCAGAATGTCCTTATATGAAGGGTGAAGCATaGAGTCTTCAGGGGCTGATT +
Preference number: 4 (lower is better)
Translates to: LILDVRITVFLACSECPYMKGEA*SLQGLI
Trigger: AATCAGCCCCTGAAGACTCCATGCTTCACCCTTCAT...ATAAGGACATTCTGAACATGCAAGGAATACAGTTATTCTCACATCAAGGATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp AGATGTTCTTTGATTTCATCTGCATCACGTGGACCACATCCCAATCTCTTCTTGTTTAAGCCTTTTGTTTaGATCTACTGTGAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: RCSLISSASRGPHPNLFLFKPFV*IYCEKS
Trigger: GGACTTCTCACAGTAGATCCAAACAAAAGGCTTAAA...CAAGAAGAGATTGGGATGTGGTCCACGTGATGCAGATGAAATCAAAGAACATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CCA 90 bp GAAAACAGACCCCTTTCTCTGATAAATCATTGTTTGAAGGGTGCAAATTTCAAAGAGTCATCAGAGGATTaGAGGACAGCTGACTTCCAT +
Preference number: 4 (lower is better)
Translates to: ENRPLSLINHCLKGANFKESSED*RTADFH
Trigger: ATGGAAGTCAGCTGTCCTCCAATCCTCTGATGACTC...TTTGAAATTTGCACCCTTCAAACAATGATTTATCAGAGAAAGGGGTCTGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp AAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCTTTTGGCAACTTCTGCTTCCTaGACTCAAGTGATTCTCCCA +
Preference number: 4 (lower is better)
Translates to: KKSNMCSIHSNILCPVLLATSAS*TQVILP
Trigger: TGGGAGAATCACTTGAGTCCAGGAAGCAGAAGTTGC...CAAAAGCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp GAAAACAGACCCCTTTCTCTGATAAATCATTGTTTGAAGGGTGCAAATTTCAAAACATTAGAATCTCCATaGCCGTGCATGGTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: ENRPLSLINHCLKGANFKTLESP*PCMVAH
Trigger: ATGAGCCACCATGCACGGCCATGGAGATTCTAATGT...TTTGAAATTTGCACCCTTCAAACAATGATTTATCAGAGAAAGGGGTCTGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR CAA 72 bp AGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTaGGCAGACATCTGGAAAACCTGTGACTTACAAGCA +
Preference number: 4 (lower is better)
Translates to: SKRYHHSMSHFL*ADIWKTCDLQA
Trigger: TGCTTGTAAGTCACAGGTTTTCCAGATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
3UTR CAA 72 bp AATTCACAAATTCATGAAACAGGGTGGACAACAGCCTaGTGTAGGGGAAGCATTTGGAATGGTAATCAACTA +
Preference number: 4 (lower is better)
Translates to: NSQIHETGWTTA*CRGSIWNGNQL
Trigger: TAGTTGATTACCATTCCAAATGCTTCCCCTACACAAGGCTGTTGTCCACCCTGTTTCATGAATTTGTGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR CAA 72 bp AAAGGGAAGCACACTTTGGTGAGCTCTGTGTTCATTTaGATTACTTCTTCAAGGCACTGCAAATTCACAACA +
Preference number: 4 (lower is better)
Translates to: KGKHTLVSSVFI*ITSSRHCKFTT
Trigger: TGTTGTGAATTTGCAGTGCCTTGAAGAAGTAATCAAAATGAACACAGAGCTCACCAAAGTGTGCTTCCCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp TTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCTTTCTCCATCAACAGTaGAAGGAGATGCTCCAGTTA +
Preference number: 4 (lower is better)
Translates to: LLKRVICALFTVTFSVQCFLHQQ*KEMLQL
Trigger: TAACTGGAGCATCTCCTTTCACTGTTGATGGAGAAA...GCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTTAGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR TCA 90 bp AAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATGCTGTTATTTCCTTTTaGGTATTGGCTTCCATCCTT +
Preference number: 4 (lower is better)
Translates to: KAKQKVSSQYESFLVGRHAVISF*VLASIL
Trigger: AAGGATGGAAGCCAATACTCAAAAGGAAATAACAGC...ATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR TCA 90 bp AACTCTTCTGCAAAGTTACTCACATCTAATTCATCTCGAATGACTGGCTTAAATCATGTGGCTTACAGCTaGAACAAGCTTCCTCATGAT +
Preference number: 4 (lower is better)
Translates to: NSSAKLLTSNSSRMTGLNHVAYS*NKLPHD
Trigger: ATCATGAGGAAGCTTGTTTCAGCTGTAAGCCACATG...ATTTAAGCCAGTCATTCGAGATGAATTAGATGTGAGTAACTTTGCAGAAGAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR TCA 90 bp TTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCTCTGTCCAGTGCTTTTaGATGAGGATAACCAAACAG +
Preference number: 4 (lower is better)
Translates to: LLKRVICALFTVTFSVQCSVQCF*MRITKQ
Trigger: CTGTTTGGTTATCCTCATTCAAAAGCACTGGACAGA...GCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTTAGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR TCA 90 bp TTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCAGTGCACATTTCACATaGCCAGCCTCTTATGTAGTT +
Preference number: 4 (lower is better)
Translates to: LLKRVICALFTVTFSVQCSAHFT*PASYVV
Trigger: AACTACATAAGAGGCTGGTCATGTGAAATGTGCACT...GCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTTAGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp TGTTGGCATCATGCTAGGTTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAGCAACTCATTTGAGCTaGGGCTTGGCTATACTTTTA +
Preference number: 4 (lower is better)
Translates to: CWHHARLLKRVICALFTVATHLS*GLAILL
Trigger: TAAAAGTATAGCCAAGCCTCAGCTCAAATGAGTTGC...TACTGTGAATAGAGCACATATTACTCTTTTTAGCAACCTAGCATGATGCCAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp CATGACACAACATGCCCCATTCTACTTGTTGCATACAAAGTAGAAGAGGAATGTGAAACCACAGTAGGATaGTTCTTCATCAGATTTCAT +
Preference number: 4 (lower is better)
Translates to: HDTTCPILLVAYKVEEECETTVG*FFIRFH
Trigger: ATGAAATCTGATGAAGAATCATCCTACTGTGGTTTC...ACATTCCTCTTCTACTTTGTATGCAACAAGTAGAATGGGGCATGTTGTGTCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp TTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCGACGACAGTTTGATCTaGTCATCTATGCATTCCTCT +
Preference number: 4 (lower is better)
Translates to: LLKRVICALFTVTFSVQCDDSLI*SSMHSS
Trigger: AGAGGAATGCATAGATGATCAGATCAAACTGTCGTC...GCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTTAGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp AAACATTTCCTATTTTGCACTAGGGTGAAGAAACCAAGACACAAACATTTGGAACGTTCTGTCCTTGTATaGTCTGTGGTTTTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: KHFLFCTRVKKPRHKHLERSVLV*SVVLAF
Trigger: AAAGGCCAAAACCACAGAGCATACAAGGACAGAACG...TTCCAAATGTTTGTGTCTTGGTTTCTTCACCCTAGTGCAAAATAGGAAATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp GAAAACAGACCCCTTTCTCTGATAAATCATTGTTTGAAGGGTGCAAATTTCAAAACCAAAAATGGCGACTaGCTAATGTGTTCCAGGACT +
Preference number: 4 (lower is better)
Translates to: ENRPLSLINHCLKGANFKTKNGD*LMCSRT
Trigger: AGTCCTGGAACACATTAGGCAGTCGCCATTTTTGGT...TTTGAAATTTGCACCCTTCAAACAATGATTTATCAGAGAAAGGGGTCTGTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR GCA 90 bp AACTCTTCTGCAAAGTTACTCACATCTAATTCATCTCGAATGACTGGCTTAAATACCAAAAATGGCGACTaGCTAATGTGTTCCAGGACT +
Preference number: 4 (lower is better)
Translates to: NSSAKLLTSNSSRMTGLNTKNGD*LMCSRT
Trigger: AGTCCTGGAACACATTAGGCAGTCGCCATTTTTGGT...ATTTAAGCCAGTCATTCGAGATGAATTAGATGTGAGTAACTTTGCAGAAGAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
CDS-3UTR GCA 90 bp CAAGCCAGACATTTTAAGCCTTTTGTTTGGATCTACTGTGAGAAGTCCTTGGATTCTGACAATATCTGGTaGCATGTATTCAATAGTTCC +
Preference number: 4 (lower is better)
Translates to: QARHFKPFVWIYCEKSLDSDNIW*HVFNSS
Trigger: GGAACTATTGAATACATGGCACCAGATATTGTCAGA...ATCCAAGGACTTCTCACAGTAGATCCAAACAAAAGGCTTAAAATGTCTGGCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR GCA 90 bp TCTCCATCAACAGTGAAAGGAGATGCTCCAGTTAGTAATTCATACATTAGAACATTCTTTGATTTCATCTaGATCACGTGGACCACATCC +
Preference number: 4 (lower is better)
Translates to: SPSTVKGDAPVSNSYIRTFFDFI*ITWTTS
Trigger: GGATGTGGTCCACGTGATGCAGATGAAATCAAAGAA...TGTTCTAATGTATGAATTACTAACTGGAGCATCTCCTTTCACTGTTGATGGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
CDS-3UTR GCA 90 bp TGTTGGCATCATGCTAGGTTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTATTCTTTGATTTCATCTaGATCACGTGGACCACATCC +
Preference number: 4 (lower is better)
Translates to: CWHHARLLKRVICALFTVFFDFI*ITWTTS
Trigger: GGATGTGGTCCACGTGATGCAGATGAAATCAAAGAA...TACTGTGAATAGAGCACATATTACTCTTTTTAGCAACCTAGCATGATGCCAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR GCA 90 bp TCTCCATCAACAGTGAAAGGAGATGCTCCAGTTAGTAATTCATACATTAGAACAAGAGTCCTTCATCATTaGACTCCTGGCAACATTTGT +
Preference number: 4 (lower is better)
Translates to: SPSTVKGDAPVSNSYIRTRVLHH*TPGNIC
Trigger: ACAAATGTTGCCAGGAGTGCAATGATGAAGGACTCT...TGTTCTAATGTATGAATTACTAACTGGAGCATCTCCTTTCACTGTTGATGGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR GCA 90 bp TGTTGGCATCATGCTAGGTTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTATCCGTCTCACTGAAGTaGTTCTTTTTCTTAATGCGC +
Preference number: 4 (lower is better)
Translates to: CWHHARLLKRVICALFTVSVSLK*FFFLMR
Trigger: GCGCATTAAGAAAAAGAAGCACTTCAGTGAGACGGA...TACTGTGAATAGAGCACATATTACTCTTTTTAGCAACCTAGCATGATGCCAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR GCA 90 bp AGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATCTGGAAATGCATAGGACCTAACTaGTTCAAACTTGGCATCAAA +
Preference number: 4 (lower is better)
Translates to: SKRYHHSMSHFLLADIWKCIGPN*FKLGIK
Trigger: TTTGATGCCAAGTTTGAAGCAGTTAGGTCCTATGCA...TTTCCAGATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp AAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCTTTTGAGTGTCTCACTATGTTaGCCAGGTTGGTCTCTAACT +
Preference number: 4 (lower is better)
Translates to: KKSNMCSIHSNILCPVLLSVSLC*PGWSLT
Trigger: AGTTAGAGACCAACCTGGGCAACATAGTGAGACACT...CAAAAGCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp AAACATTTCCTATTTTGCACTAGGGTGAAGAAACCAAGACACAAACATTTGGAATATCCCAGTTTCCTGTaGTCTGAAGAACAGCTGCTA +
Preference number: 4 (lower is better)
Translates to: KHFLFCTRVKKPRHKHLEYPSFL*SEEQLL
Trigger: TAGCAGCTGTTCTTCAGAGCACAGGAAACTGGGATA...TTCCAAATGTTTGTGTCTTGGTTTCTTCACCCTAGTGCAAAATAGGAAATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp ACCCACATTGTCCACAAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTAAATACGAGAAAAAGTaGATGTACGGAGTATGGGAT +
Preference number: 4 (lower is better)
Translates to: THIVHKAKQKVSSQYESFKYEKK*MYGVWD
Trigger: ATCCCATACTCCGTACATGCACTTTTTCTCGTATTT...AAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTTGTGGACAATGTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp AAACATTTCCTATTTTGCACTAGGGTGAAGAAACCAAGACACAAACATTTGGAAGTTCACTGCAACTTCTaGTTCCTGGACTCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: KHFLFCTRVKKPRHKHLEVHCNF*FLDSSD
Trigger: ATCACTTGAGTCCAGGAAGCAGAAGTTGCAGTGAAC...TTCCAAATGTTTGTGTCTTGGTTTCTTCACCCTAGTGCAAAATAGGAAATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp AAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCTTTTGACAATCTTGGTTCACTaGAACTTCTGCTTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: KKSNMCSIHSNILCPVLLTILVH*NFCFLD
Trigger: GTCCAGGAAGCAGAAGTTGCAGTGAACCAAGATTGT...CAAAAGCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp TTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCTCCTTGTATGCTCTGTaGTTTTGGCCTTTTGAACGA +
Preference number: 4 (lower is better)
Translates to: LLKRVICALFTVTFSVQCSLYAL*FWPFER
Trigger: TCGTTCAAAAGGCCAAAACCACAGAGCATACAAGGA...GCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTTAGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp TGTTGGCATCATGCTAGGTTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTATCTGTCAGCACCACATaGCCATTAGAATCAAGTAGA +
Preference number: 4 (lower is better)
Translates to: CWHHARLLKRVICALFTVSVSTT*PLESSR
Trigger: TCTACTTGATTCTAATGGCCATGTGGTGCTGACAGA...TACTGTGAATAGAGCACATATTACTCTTTTTAGCAACCTAGCATGATGCCAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp GAAAACAGACCCCTTTCTCTGATAAATCATTGTTTGAAGGGTGCAAATTTCAAATTCATCTGCATCACGTaGACCACATCCCAATCTCTT +
Preference number: 4 (lower is better)
Translates to: ENRPLSLINHCLKGANFKFICIT*TTSQSL
Trigger: AAGAGATTGGGATGTGGTCCACGTGATGCAGATGAA...TTTGAAATTTGCACCCTTCAAACAATGATTTATCAGAGAAAGGGGTCTGTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp AAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCTTTTGTTCATCTCGAATGACTaGCTTAAATGGTGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: KKSNMCSIHSNILCPVLLFISND*LKWCRH
Trigger: GTGCCTGCACCATTTAAGCCAGTCATTCGAGATGAA...CAAAAGCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp TTGATCCTTGATGTGAGAATAACTGTATTCCTTGCATGTTCAGAATGTCCTTATTTCATCTCGAATGACTaGCTTAAATGGTGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: LILDVRITVFLACSECPYFISND*LKWCRH
Trigger: GTGCCTGCACCATTTAAGCCAGTCATTCGAGATGAA...ATAAGGACATTCTGAACATGCAAGGAATACAGTTATTCTCACATCAAGGATCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp GAAAACAGACCCCTTTCTCTGATAAATCATTGTTTGAAGGGTGCAAATTTCAAACCAACATCATGCATGTaGCTTACAGCTGAAACAAGC +
Preference number: 4 (lower is better)
Translates to: ENRPLSLINHCLKGANFKPTSCM*LTAETS
Trigger: GCTTGTTTCAGCTGTAAGCCACATGCATGATGTTGG...TTTGAAATTTGCACCCTTCAAACAATGATTTATCAGAGAAAGGGGTCTGTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp CCATCAACAGTGAAAGGAGATGCTCCAGTTAGTAATTCATACATTAGAACACCCTTTAAGCCTTTTGTTTaGATCTACTGTGAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: PSTVKGDAPVSNSYIRTPFKPFV*IYCEKS
Trigger: GGACTTCTCACAGTAGATCCAAACAAAAGGCTTAAA...GGGTGTTCTAATGTATGAATTACTAACTGGAGCATCTCCTTTCACTGTTGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CCA 90 bp TTGTTTGAAGGGTGCAAATTTCAAAAACCCACATTGTCCACAAGGCAAAGCAAAGGAATAAAGGTGCAATaGATCACTGATACACTCCTA +
Preference number: 4 (lower is better)
Translates to: LFEGCKFQKPTLSTRQSKGIKVQ*ITDTLL
Trigger: TAGGAGTGTATCAGTGATCCATTGCACCTTTATTCC...TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAATTTGCACCCTTCAAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp GTGAACTCTTCTGCAAAGTTACTCACATCTAATTCATCTCGAATGACTGGCTTACCCGAATACAGAGTATaGGACCTTGAGTTCTTATAT +
Preference number: 4 (lower is better)
Translates to: VNSSAKLLTSNSSRMTGLPEYRV*DLEFLY
Trigger: ATATAAGAACTCAAGGTCCCATACTCTGTATTCGGG...TAAGCCAGTCATTCGAGATGAATTAGATGTGAGTAACTTTGCAGAAGAGTTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648062.1
CDS-3UTR CCA 90 bp TTGATCCTTGATGTGAGAATAACTGTATTCCTTGCATGTTCAGAATGTCCTTATTACATAACAGGGAGCTaGGCATACAAAGAAAAGGGC +
Preference number: 4 (lower is better)
Translates to: LILDVRITVFLACSECPYYITGS*AYKEKG
Trigger: GCCCTTTTCTTTGTATGCCCAGCTCCCTGTTATGTA...ATAAGGACATTCTGAACATGCAAGGAATACAGTTATTCTCACATCAAGGATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp AAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCTTTTGATTCATGAAACAGGGTaGACAACAGCCTTGTGTAGG +
Preference number: 4 (lower is better)
Translates to: KKSNMCSIHSNILCPVLLIHETG*TTALCR
Trigger: CCTACACAAGGCTGTTGTCCACCCTGTTTCATGAAT...CAAAAGCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp TTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCTGCATGTACGGAGTATaGGATGAACTGATGCAGTTA +
Preference number: 4 (lower is better)
Translates to: LLKRVICALFTVTFSVQCCMYGV*DELMQL
Trigger: TAACTGCATCAGTTCATCCCATACTCCGTACATGCA...GCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTTAGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp TTGTTTGAAGGGTGCAAATTTCAAAAACCCACATTGTCCACAAGGCAAAGCAAAATCTTTCTGTCTCTATaGATTTGCCCATTCTGGACA +
Preference number: 4 (lower is better)
Translates to: LFEGCKFQKPTLSTRQSKIFLSL*ICPFWT
Trigger: TGTCCAGAATGGGCAAATCCATAGAGACAGAAAGAT...TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAATTTGCACCCTTCAAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp AAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCTTTTGACAGCTTCCCTTAGGTaGGAGAAAGAAGGAATACCA +
Preference number: 4 (lower is better)
Translates to: KKSNMCSIHSNILCPVLLTASLR*EKEGIP
Trigger: TGGTATTCCTTCTTTCTCCCACCTAAGGGAAGCTGT...CAAAAGCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp GAAAACAGACCCCTTTCTCTGATAAATCATTGTTTGAAGGGTGCAAATTTCAAACTGGAAACAAAGTTTTaGCCAGAGATGAACACGCAC +
Preference number: 4 (lower is better)
Translates to: ENRPLSLINHCLKGANFKLETKF*PEMNTH
Trigger: GTGCGTGTTCATCTCTGGCCAAAACTTTGTTTCCAG...TTTGAAATTTGCACCCTTCAAACAATGATTTATCAGAGAAAGGGGTCTGTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR CAA 72 bp CCCCTGAAAAACACTAATCTTTCTGTCTCTATGGATTaGCCCATTCTGGACATTTCATGTAAGTGGAATCAT +
Preference number: 4 (lower is better)
Translates to: PLKNTNLSVSMD*PILDISCKWNH
Trigger: ATGATTCCACTTACATGAAATGTCCAGAATGGGCAAATCCATAGAGACAGAAAGATTAGTGTTTTTCAGGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp GAAAACAGACCCCTTTCTCTGATAAATCATTGTTTGAAGGGTGCAAATTTCAAATGGGATCCATTTCTGTaGACTCTTCTGCAAAGTTAC +
Preference number: 4 (lower is better)
Translates to: ENRPLSLINHCLKGANFKWDPFL*TLLQSY
Trigger: GTAACTTTGCAGAAGAGTTCACAGAAATGGATCCCA...TTTGAAATTTGCACCCTTCAAACAATGATTTATCAGAGAAAGGGGTCTGTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR TCA 90 bp GAAAACAGACCCCTTTCTCTGATAAATCATTGTTTGAAGGGTGCAAATTTCAAATCTGTCCAGTGCTTTTaGATGAGGATAACCAAACAG +
Preference number: 4 (lower is better)
Translates to: ENRPLSLINHCLKGANFKSVQCF*MRITKQ
Trigger: CTGTTTGGTTATCCTCATTCAAAAGCACTGGACAGA...TTTGAAATTTGCACCCTTCAAACAATGATTTATCAGAGAAAGGGGTCTGTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR TCA 90 bp AAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCTTTTGCATCTGGAAAACCTGTaGCTTACAAGCAGCTCAAAT +
Preference number: 4 (lower is better)
Translates to: KKSNMCSIHSNILCPVLLHLENL*LTSSSN
Trigger: ATTTGAGCTGCTTGTAAGTCACAGGTTTTCCAGATG...CAAAAGCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR TCA 90 bp AAACATTTCCTATTTTGCACTAGGGTGAAGAAACCAAGACACAAACATTTGGAAGAAATGGGGGCAAGGTaGATAAGTATCCAGTCAATT +
Preference number: 4 (lower is better)
Translates to: KHFLFCTRVKKPRHKHLEEMGAR*ISIQSI
Trigger: AATTGACTGGATACTTATTCACCTTGCCCCCATTTC...TTCCAAATGTTTGTGTCTTGGTTTCTTCACCCTAGTGCAAAATAGGAAATGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp AAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATTGTCCATACGGGCACTaGAATAACATTTTTGTAAAG +
Preference number: 4 (lower is better)
Translates to: KAKQKVSSQYESFLVGRHCPYGH*NNIFVK
Trigger: CTTTACAAAAATGTTATTTCAGTGCCCGTATGGACA...ATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp AGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATCTGGAAAGAACAAAGTTTCAAGTaGTATCTCCATCAGCGAATA +
Preference number: 4 (lower is better)
Translates to: SKRYHHSMSHFLLADIWKEQSFK*YLHQRI
Trigger: TATTCGCTGATGGAGATATCACTTGAAACTTTGTTC...TTTCCAGATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp TTGTTTGAAGGGTGCAAATTTCAAAAACCCACATTGTCCACAAGGCAAAGCAAATCTGACAATATCTGGTaGCATGTATTCAATAGTTCC +
Preference number: 4 (lower is better)
Translates to: LFEGCKFQKPTLSTRQSKSDNIW*HVFNSS
Trigger: GGAACTATTGAATACATGGCACCAGATATTGTCAGA...TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAATTTGCACCCTTCAAACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR GCA 90 bp GAAAACAGACCCCTTTCTCTGATAAATCATTGTTTGAAGGGTGCAAATTTCAAAAGAGTCCTTCATCATTaGACTCCTGGCAACATTTGT +
Preference number: 4 (lower is better)
Translates to: ENRPLSLINHCLKGANFKRVLHH*TPGNIC
Trigger: ACAAATGTTGCCAGGAGTGCAATGATGAAGGACTCT...TTTGAAATTTGCACCCTTCAAACAATGATTTATCAGAGAAAGGGGTCTGTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR GCA 90 bp AAACATTTCCTATTTTGCACTAGGGTGAAGAAACCAAGACACAAACATTTGGAAAGAGTCCTTCATCATTaGACTCCTGGCAACATTTGT +
Preference number: 4 (lower is better)
Translates to: KHFLFCTRVKKPRHKHLERVLHH*TPGNIC
Trigger: ACAAATGTTGCCAGGAGTGCAATGATGAAGGACTCT...TTCCAAATGTTTGTGTCTTGGTTTCTTCACCCTAGTGCAAAATAGGAAATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp TCAAAAGACGCTGAATTAGGTCTTTCGCTAAAGCACTCATTTCTTGGGGATATGTCCACAAAAGGAATATaGTCTTTCAGTCTTGAACAA +
Preference number: 4 (lower is better)
Translates to: SKDAELGLSLKHSFLGDMSTKGI*SFSLEQ
Trigger: TTGTTCAAGACTGAAAGAGCATATTCCTTTTGTGGA...CATATCCCCAAGAAATGAGTGCTTTAGCGAAAGACCTAATTCAGCGTCTTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554206.1
CDS-3UTR GCA 90 bp GAAAACAGACCCCTTTCTCTGATAAATCATTGTTTGAAGGGTGCAAATTTCAAACTACATGACACAACATaGCCCATTCTACTTGTTGCA +
Preference number: 4 (lower is better)
Translates to: ENRPLSLINHCLKGANFKLHDTT*PILLVA
Trigger: TGCAACAAGTAGAATGGGGCATGTTGTGTCATGTAG...TTTGAAATTTGCACCCTTCAAACAATGATTTATCAGAGAAAGGGGTCTGTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614987.5
ENST00000648062.1
CDS-3UTR GCA 90 bp CATGACACAACATGCCCCATTCTACTTGTTGCATACAAAGTAGAAGAGGAATGTATTACTAGAGATCTGTaGCTGATGGAATCACATTTT +
Preference number: 4 (lower is better)
Translates to: HDTTCPILLVAYKVEEECITRDL*LMESHF
Trigger: AAAATGTGATTCCATCAGGCACAGATCTCTAGTAAT...ACATTCCTCTTCTACTTTGTATGCAACAAGTAGAATGGGGCATGTTGTGTCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp TTGTTTGAAGGGTGCAAATTTCAAAAACCCACATTGTCCACAAGGCAAAGCAAATCCCATGAGCCACCATaGTCAGCTAATTTTTATTTT +
Preference number: 4 (lower is better)
Translates to: LFEGCKFQKPTLSTRQSKSHEPP*SANFYF
Trigger: AAAATAAAAATTAGCTGAGCATGGTGGCTCATGGGA...TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAATTTGCACCCTTCAAACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp AAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCTTTTGTTCTTAGCAAGATGTTaGCCCCCTGAAAATATGCTC +
Preference number: 4 (lower is better)
Translates to: KKSNMCSIHSNILCPVLLFLARC*PPENML
Trigger: GAGCATATTTTCAGGGGGGCAACATCTTGCTAAGAA...CAAAAGCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp TTGTTTGAAGGGTGCAAATTTCAAAAACCCACATTGTCCACAAGGCAAAGCAAAAGGAATAATATCAGGTaGAAACTCTTCCAGAGTGTA +
Preference number: 4 (lower is better)
Translates to: LFEGCKFQKPTLSTRQSKRNNIR*KLFQSV
Trigger: TACACTCTGGAAGAGTTTGCACCTGATATTATTCCT...TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAATTTGCACCCTTCAAACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp AAACATTTCCTATTTTGCACTAGGGTGAAGAAACCAAGACACAAACATTTGGAAAATTGCAGACTCCTGTaGAACAAGGTGAGACTTCAA +
Preference number: 4 (lower is better)
Translates to: KHFLFCTRVKKPRHKHLENCRLL*NKVRLQ
Trigger: TTGAAGTCTCACCTTGTTGCACAGGAGTCTGCAATT...TTCCAAATGTTTGTGTCTTGGTTTCTTCACCCTAGTGCAAAATAGGAAATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp ACCCACATTGTCCACAAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTTACATTTCATCTCTTTaGTTTGCCAGGAACAAAGTT +
Preference number: 4 (lower is better)
Translates to: THIVHKAKQKVSSQYESFYISSL*FARNKV
Trigger: AACTTTGTTCCTGGCAAAGCAAAGAGATGAAATGTA...AAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTTGTGGACAATGTGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp TGGCATACAGCTTTCCAGTATCATGGCCACTTATTTTACGAACTAGAAATACTTTATGCTCTGTGGTTTTaGCCTTTTGAACGATTGTTG +
Preference number: 4 (lower is better)
Translates to: WHTAFQYHGHLFYELEILYALWF*PFERLL
Trigger: CAACAATCGTTCAAAAGGCCAAAACCACAGAGCATA...AAGTATTTCTAGTTCGTAAAATAAGTGGCCATGATACTGGAAAGCTGTATGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000556594.1
CDS-3UTR CCA 90 bp TTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCCCCTCTGACAATATCTaGTGCCATGTATTCAATAGT +
Preference number: 4 (lower is better)
Translates to: LLKRVICALFTVTFSVQCPSDNI*CHVFNS
Trigger: ACTATTGAATACATGGCACCAGATATTGTCAGAGGG...GCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTTAGCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp GAAAACAGACCCCTTTCTCTGATAAATCATTGTTTGAAGGGTGCAAATTTCAAAAAAGCACTCATTTCTTaGGGATATGGAGGCTCACTT +
Preference number: 4 (lower is better)
Translates to: ENRPLSLINHCLKGANFKKALIS*GYGGSL
Trigger: AAGTGAGCCTCCATATCCCCAAGAAATGAGTGCTTT...TTTGAAATTTGCACCCTTCAAACAATGATTTATCAGAGAAAGGGGTCTGTTTTC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp TTCTTTTTCTTAATGCGCTCAAACAGTTCTCCTCCATTCAGAAGTTCCATCACTATAGTGTTGATAGAATaGAGAGTCCTTCATCATTGC +
Preference number: 4 (lower is better)
Translates to: FFFLMRSNSSPPFRSSITIVLIE*RVLHHC
Trigger: GCAATGATGAAGGACTCTCCATTCTATCAACACTAT...AGTGATGGAACTTCTGAATGGAGGAGAACTGTTTGAGCGCATTAAGAAAAAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CCA 90 bp AAACATTTCCTATTTTGCACTAGGGTGAAGAAACCAAGACACAAACATTTGGAAGCAACTTCACAATATTaGGGTGTCCTTCACAGAGTT +
Preference number: 4 (lower is better)
Translates to: KHFLFCTRVKKPRHKHLEATSQY*GVLHRV
Trigger: AACTCTGTGAAGGACACCCCAATATTGTGAAGTTGC...TTCCAAATGTTTGTGTCTTGGTTTCTTCACCCTAGTGCAAAATAGGAAATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp TTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCACTGTGAGAAGTCCTTaGATCAAATCTTTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: LLKRVICALFTVTFSVQCTVRSP*IKSLAS
Trigger: AGAGGCTAAAGATTTGATCCAAGGACTTCTCACAGT...GCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTTAGCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp AGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATCTGGAAATTTAAGCCTTTTGTTTaGATCTACTGTGAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: SKRYHHSMSHFLLADIWKFKPFV*IYCEKS
Trigger: GGACTTCTCACAGTAGATCCAAACAAAAGGCTTAAA...TTTCCAGATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp AGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATCTGGAAAAGACAGACAACAATGTaGAAATTAACTCAGGAGACT +
Preference number: 4 (lower is better)
Translates to: SKRYHHSMSHFLLADIWKRQTTM*KLTQET
Trigger: AGTCTCCTGAGTTAATTTCCACATTGTTGTCTGTCT...TTTCCAGATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp TTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCAATACAAAAATTAGCTaGGTGTGCTGGCTTGTGTCT +
Preference number: 4 (lower is better)
Translates to: LLKRVICALFTVTFSVQCNTKIS*VCWLVS
Trigger: AGACACAAGCCAGCACACCCAGCTAATTTTTGTATT...GCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTTAGCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp AAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATCCACAGCAAGGACACTaGAATTTAAAAATCTGGAAT +
Preference number: 4 (lower is better)
Translates to: KAKQKVSSQYESFLVGRHPQQGH*NLKIWN
Trigger: ATTCCAGATTTTTAAATTCCAGTGTCCTTGCTGTGG...ATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR CAA 72 bp AAGGAGTCCATTGTCATTACTTCATTTAGCATGTTATaGGAGGTCCTGATCAGCTCAATAAGGCAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: KESIVITSFSML*EVLISSIRQEK
Trigger: TTTTTCTTGCCTTATTGAGCTGATCAGGACCTCCAATAACATGCTAAATGAAGTAATGACAATGGACTCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp TCTCCATCAACAGTGAAAGGAGATGCTCCAGTTAGTAATTCATACATTAGAACATTCATCAAAAGACGCTaGATTAGGTCTTTCGCTAAA +
Preference number: 4 (lower is better)
Translates to: SPSTVKGDAPVSNSYIRTFIKRR*IRSFAK
Trigger: TTTAGCGAAAGACCTAATTCAGCGTCTTTTGATGAA...TGTTCTAATGTATGAATTACTAACTGGAGCATCTCCTTTCACTGTTGATGGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
CDS-3UTR TCA 90 bp TTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCTTCATCAAAAGACGCTaGATTAGGTCTTTCGCTAAA +
Preference number: 4 (lower is better)
Translates to: LLKRVICALFTVTFSVQCFIKRR*IRSFAK
Trigger: TTTAGCGAAAGACCTAATTCAGCGTCTTTTGATGAA...GCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTTAGCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR TCA 90 bp TTTTCTCCATCAACAGTGAAAGGAGATGCTCCAGTTAGTAATTCATACATTAGAACACTTTCGACAAATTaGAAAACTACCTTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: FSPSTVKGDAPVSNSYIRTLSTN*KTTFSQ
Trigger: CTGGGAGAAGGTAGTTTTTCAATTTGTCGAAAGTGT...TCTAATGTATGAATTACTAACTGGAGCATCTCCTTTCACTGTTGATGGAGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR TCA 90 bp GAAAACAGACCCCTTTCTCTGATAAATCATTGTTTGAAGGGTGCAAATTTCAAAGCTGTTATTTCCTTTTaGGTATTGGCTTCCATCCTT +
Preference number: 4 (lower is better)
Translates to: ENRPLSLINHCLKGANFKAVISF*VLASIL
Trigger: AAGGATGGAAGCCAATACTCAAAAGGAAATAACAGC...TTTGAAATTTGCACCCTTCAAACAATGATTTATCAGAGAAAGGGGTCTGTTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR TCA 90 bp TTTTCTCCATCAACAGTGAAAGGAGATGCTCCAGTTAGTAATTCATACATTAGAGCTGTTATTTCCTTTTaGGTATTGGCTTCCATCCTT +
Preference number: 4 (lower is better)
Translates to: FSPSTVKGDAPVSNSYIRAVISF*VLASIL
Trigger: AAGGATGGAAGCCAATACTCAAAAGGAAATAACAGC...TCTAATGTATGAATTACTAACTGGAGCATCTCCTTTCACTGTTGATGGAGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR TCA 90 bp AACTCTTCTGCAAAGTTACTCACATCTAATTCATCTCGAATGACTGGCTTAAATGCTGTTATTTCCTTTTaGGTATTGGCTTCCATCCTT +
Preference number: 4 (lower is better)
Translates to: NSSAKLLTSNSSRMTGLNAVISF*VLASIL
Trigger: AAGGATGGAAGCCAATACTCAAAAGGAAATAACAGC...ATTTAAGCCAGTCATTCGAGATGAATTAGATGTGAGTAACTTTGCAGAAGAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR TCA 90 bp TTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCATTACTAGGAATAACTaGAAGCTGGGAGTAGAAAAC +
Preference number: 4 (lower is better)
Translates to: LLKRVICALFTVTFSVQCITRNN*KLGVEN
Trigger: GTTTTCTACTCCCAGCTTTCAGTTATTCCTAGTAAT...GCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTTAGCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp TGTTGGCATCATGCTAGGTTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAAAGTGGCTTCAATGGTaGATTATTTTAAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: CWHHARLLKRVICALFTVKWLQW*IILNRR
Trigger: CCTCCTGTTTAAAATAATTCACCATTGAAGCCACTT...TACTGTGAATAGAGCACATATTACTCTTTTTAGCAACCTAGCATGATGCCAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp AAACATTTCCTATTTTGCACTAGGGTGAAGAAACCAAGACACAAACATTTGGAATCACATATGACCATGTaGCAACCAAGTTATCAATGC +
Preference number: 4 (lower is better)
Translates to: KHFLFCTRVKKPRHKHLESHMTM*QPSYQC
Trigger: GCATTGATAACTTGGTTGTCACATGGTCATATGTGA...TTCCAAATGTTTGTGTCTTGGTTTCTTCACCCTAGTGCAAAATAGGAAATGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp TGTTGGCATCATGCTAGGTTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTATCCACAAAAGGAATATaGTCTTTCAGTTTCATCAGC +
Preference number: 4 (lower is better)
Translates to: CWHHARLLKRVICALFTVSTKGI*SFSFIS
Trigger: GCTGATGAAACTGAAAGAGCATATTCCTTTTGTGGA...TACTGTGAATAGAGCACATATTACTCTTTTTAGCAACCTAGCATGATGCCAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536315.6
ENST00000614987.5
CDS-3UTR GCA 90 bp TTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCTCCACAAAAGGAATATaGTCTTTCAGTTTCATCAGC +
Preference number: 4 (lower is better)
Translates to: LLKRVICALFTVTFSVQCSTKGI*SFSFIS
Trigger: GCTGATGAAACTGAAAGAGCATATTCCTTTTGTGGA...GCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTTAGCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536315.6
ENST00000614987.5
CDS-3UTR GCA 90 bp TTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCTCTGACAATATCTGGTaGCATGTATTCAATAGTTCC +
Preference number: 4 (lower is better)
Translates to: LLKRVICALFTVTFSVQCSDNIW*HVFNSS
Trigger: GGAACTATTGAATACATGGCACCAGATATTGTCAGA...GCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTTAGCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp AAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCTTTTGCCCTCTGACAATATCTaGTGCCATGTATTCAATAGT +
Preference number: 4 (lower is better)
Translates to: KKSNMCSIHSNILCPVLLPSDNI*CHVFNS
Trigger: ACTATTGAATACATGGCACCAGATATTGTCAGAGGG...CAAAAGCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp GAAAACAGACCCCTTTCTCTGATAAATCATTGTTTGAAGGGTGCAAATTTCAAACCCTCTGACAATATCTaGTGCCATGTATTCAATAGT +
Preference number: 4 (lower is better)
Translates to: ENRPLSLINHCLKGANFKPSDNI*CHVFNS
Trigger: ACTATTGAATACATGGCACCAGATATTGTCAGAGGG...TTTGAAATTTGCACCCTTCAAACAATGATTTATCAGAGAAAGGGGTCTGTTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp TGTTGGCATCATGCTAGGTTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAATAGTGTTGATAGAATaGAGAGTCCTTCATCATTGC +
Preference number: 4 (lower is better)
Translates to: CWHHARLLKRVICALFTVIVLIE*RVLHHC
Trigger: GCAATGATGAAGGACTCTCCATTCTATCAACACTAT...TACTGTGAATAGAGCACATATTACTCTTTTTAGCAACCTAGCATGATGCCAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp TTGATCCTTGATGTGAGAATAACTGTATTCCTTGCATGTTCAGAATGTCCTTATACTGTGAGAAGTCCTTaGATCAAATCTTTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: LILDVRITVFLACSECPYTVRSP*IKSLAS
Trigger: AGAGGCTAAAGATTTGATCCAAGGACTTCTCACAGT...ATAAGGACATTCTGAACATGCAAGGAATACAGTTATTCTCACATCAAGGATCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp AAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCTTTTGTATTTGTTAAAGGCGTaGAAGGTTGCTTTCACACAG +
Preference number: 4 (lower is better)
Translates to: KKSNMCSIHSNILCPVLLYLLKA*KVAFTQ
Trigger: CTGTGTGAAAGCAACCTTCCACGCCTTTAACAAATA...CAAAAGCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp TTTTCTCCATCAACAGTGAAAGGAGATGCTCCAGTTAGTAATTCATACATTAGAGGAATAAAGGTGCAATaGATCACTGATACACTCCTA +
Preference number: 4 (lower is better)
Translates to: FSPSTVKGDAPVSNSYIRGIKVQ*ITDTLL
Trigger: TAGGAGTGTATCAGTGATCCATTGCACCTTTATTCC...TCTAATGTATGAATTACTAACTGGAGCATCTCCTTTCACTGTTGATGGAGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648062.1
CDS-3UTR CCA 90 bp TTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCTGTAGGGGAAGCATTTaGAATGGTAATCAACTACTT +
Preference number: 4 (lower is better)
Translates to: LLKRVICALFTVTFSVQCCRGSI*NGNQLL
Trigger: AAGTAGTTGATTACCATTCCAAATGCTTCCCCTACA...GCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTTAGCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp TTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCGTAGTAATCAGACACTaGATTTCTCAGACAAGAGTT +
Preference number: 4 (lower is better)
Translates to: LLKRVICALFTVTFSVQCVVIRH*ISQTRV
Trigger: AACTCTTGTCTGAGAAATCCAGTGTCTGATTACTAC...GCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTTAGCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp TTGTTTGAAGGGTGCAAATTTCAAAAACCCACATTGTCCACAAGGCAAAGCAAAACTGACAACAGACAATaGAAACAAACAACTAGTAGT +
Preference number: 4 (lower is better)
Translates to: LFEGCKFQKPTLSTRQSKTDNRQ*KQTTSS
Trigger: ACTACTAGTTGTTTGTTTCCATTGTCTGTTGTCAGT...TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAATTTGCACCCTTCAAACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp TGTTGGCATCATGCTAGGTTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAGACATTTCATGTAAGTaGAATCATACAATACGTGGC +
Preference number: 4 (lower is better)
Translates to: CWHHARLLKRVICALFTVDISCK*NHTIRG
Trigger: GCCACGTATTGTATGATTCCACTTACATGAAATGTC...TACTGTGAATAGAGCACATATTACTCTTTTTAGCAACCTAGCATGATGCCAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp AAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCTTTTGTGGATTTGCCCATTCTaGACATTTCATGTAAGTGGA +
Preference number: 4 (lower is better)
Translates to: KKSNMCSIHSNILCPVLLWICPF*TFHVSG
Trigger: TCCACTTACATGAAATGTCCAGAATGGGCAAATCCA...CAAAAGCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp TTGATCCTTGATGTGAGAATAACTGTATTCCTTGCATGTTCAGAATGTCCTTATCTTTCTCTGTTAAGCTaGAACTTTGGTGTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: LILDVRITVFLACSECPYLSLLS*NFGVSC
Trigger: ACAGGAAACACCAAAGTTCCAGCTTAACAGAGAAAG...ATAAGGACATTCTGAACATGCAAGGAATACAGTTATTCTCACATCAAGGATCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR TCA 90 bp GAAAACAGACCCCTTTCTCTGATAAATCATTGTTTGAAGGGTGCAAATTTCAAATTCATCAAAAGACGCTaGATTAGGTCTTTCGCTAAA +
Preference number: 4 (lower is better)
Translates to: ENRPLSLINHCLKGANFKFIKRR*IRSFAK
Trigger: TTTAGCGAAAGACCTAATTCAGCGTCTTTTGATGAA...TTTGAAATTTGCACCCTTCAAACAATGATTTATCAGAGAAAGGGGTCTGTTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR GCA 90 bp AACTCTTCTGCAAAGTTACTCACATCTAATTCATCTCGAATGACTGGCTTAAATTCCACAAAAGGAATATaGTCTTTCAGTTTCATCAGC +
Preference number: 4 (lower is better)
Translates to: NSSAKLLTSNSSRMTGLNSTKGI*SFSFIS
Trigger: GCTGATGAAACTGAAAGAGCATATTCCTTTTGTGGA...ATTTAAGCCAGTCATTCGAGATGAATTAGATGTGAGTAACTTTGCAGAAGAGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556178.5
CDS-3UTR GCA 90 bp TTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCAGGATTACAGTGATATaGCTGTATTTTATCAGACTG +
Preference number: 4 (lower is better)
Translates to: LLKRVICALFTVTFSVQCRITVI*LYFIRL
Trigger: CAGTCTGATAAAATACAGGCATATCACTGTAATCCT...GCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTTAGCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CCA 90 bp AAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCTTTTGATAGTGTTGATAGAATaGAGAGTCCTTCATCATTGC +
Preference number: 4 (lower is better)
Translates to: KKSNMCSIHSNILCPVLLIVLIE*RVLHHC
Trigger: GCAATGATGAAGGACTCTCCATTCTATCAACACTAT...CAAAAGCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CCA 90 bp GAAAACAGACCCCTTTCTCTGATAAATCATTGTTTGAAGGGTGCAAATTTCAAAATAGTGTTGATAGAATaGAGAGTCCTTCATCATTGC +
Preference number: 4 (lower is better)
Translates to: ENRPLSLINHCLKGANFKIVLIE*RVLHHC
Trigger: GCAATGATGAAGGACTCTCCATTCTATCAACACTAT...TTTGAAATTTGCACCCTTCAAACAATGATTTATCAGAGAAAGGGGTCTGTTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
3UTR CAA 72 bp TTCTCCATAAATCAGTTCCTGGAGTTTCAACTCAAATaGTCAAATAATTGTGCTCCCGGTGAGATTTTTATG +
Preference number: 4 (lower is better)
Translates to: FSINQFLEFQLK*SNNCAPGEIFM
Trigger: CATAAAAATCTCACCGGGAGCACAATTATTTGACAATTTGAGTTGAAACTCCAGGAACTGATTTATGGAGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
3UTR CAA 72 bp TTCTATGGAGCTACCATATATGACAGTGTCCTATTATaGCTGCCTTTTGATCACATGAACATGGATCATAAT +
Preference number: 4 (lower is better)
Translates to: FYGATIYDSVLL*LPFDHMNMDHN
Trigger: ATTATGATCCATGTTCATGTGATCAAAAGGCAGCAATAATAGGACACTGTCATATATGGTAGCTCCATAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR GCA 90 bp GAAAACAGACCCCTTTCTCTGATAAATCATTGTTTGAAGGGTGCAAATTTCAAACTTTTCAATACATTGTaGTGGGTCAAGTTAATACTC +
Preference number: 4 (lower is better)
Translates to: ENRPLSLINHCLKGANFKLFNTL*WVKLIL
Trigger: GAGTATTAACTTGACCCAGCACAATGTATTGAAAAG...TTTGAAATTTGCACCCTTCAAACAATGATTTATCAGAGAAAGGGGTCTGTTTTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS GCA 90 bp CAGCGACATCCTCGGAGGTGCGTGCCACGGGCAGCGGTCGGCGGCTaGGCTGGCCCCGATGCCTGGTGCCCGCCGCTCATTCCCGGGCTG +
Preference number: 5 (lower is better)
Translates to: QRHPRRCVPRAAVGG*AGPDAWCPPLIPGL
Trigger: CAGCCCGGGAATGAGCGGCGGGCACCAGGCATCGGGGCCAGCGCAGCCGCCGACCGCTGCCCGTGGCACGCACCTCCGAGGATGTCGCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536315.6
CDS CCA 90 bp ACATCCTCGGAGGTGCGTGCCACGGGCAGCGGTCGGCGGCTGCGCTaGCCCCGATGCCTGGTGCCCGCCGCTCATTCCCGGGCTGGGGAA +
Preference number: 5 (lower is better)
Translates to: TSSEVRATGSGRRLR*PRCLVPAAHSRAGE
Trigger: TTCCCCAGCCCGGGAATGAGCGGCGGGCACCAGGCATCGGGGCCAGCGCAGCCGCCGACCGCTGCCCGTGGCACGCACCTCCGAGGATGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536315.6
CDS GCA 90 bp ATTAGCTGTGCGGGAAGGGGGAGCAGCGACATCCTCGGAGGTGCGTaGCACGGGCAGCGGTCGGCGGCTGCGCTGGCCCCGATGCCTGGT +
Preference number: 5 (lower is better)
Translates to: ISCAGRGSSDILGGA*HGQRSAAALAPMPG
Trigger: ACCAGGCATCGGGGCCAGCGCAGCCGCCGACCGCTGCCCGTGGCACGCACCTCCGAGGATGTCGCTGCTCCCCCTTCCCGCACAGCTAAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536315.6
CDS CCA 90 bp GGCGGCTCCAGAACTCGGACGCAAAGACGAGTCTCTTTCCCGCTCTaGCCGCACGGCTCGCTCCTCGCCTCCTCCCCCTTCGGCGGGCAC +
Preference number: 5 (lower is better)
Translates to: GGSRTRTQRRVSFPL*PHGSLLASSPFGGH
Trigger: GTGCCCGCCGAAGGGGGAGGAGGCGAGGAGCGAGCCGTGCGGCCAGAGCGGGAAAGAGACTCGTCTTTGCGTCCGAGTTCTGGAGCCGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554206.1
ENST00000614987.5
CDS-3UTR CAA 90 bp TCTTTCCTCTGGGATCCCGTCAGCTTCTCCTTCCCCAGAGGTCCTGACATTGCTAGGGTCTCCGGGTTATaGCTGTCGGCAGGATTGCTG +
Preference number: 5 (lower is better)
Translates to: SFLWDPVSFSFPRGPDIARVSGL*LSAGLL
Trigger: CAGCAATCCTGCCGACAGCAATAACCCGGAGACCCT...AGCAATGTCAGGACCTCTGGGGAAGGAGAAGCTGACGGGATCCCAGAGGAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp GAGCAACAAAGGAATAGCCCTGAAACAGCTTCTCAGAACTCTGGGGCAGGGCTGAGGGTCTCCGGGTTATaGCTGTCGGCAGGATTGCTG +
Preference number: 5 (lower is better)
Translates to: EQQRNSPETASQNSGAGLRVSGL*LSAGLL
Trigger: CAGCAATCCTGCCGACAGCAATAACCCGGAGACCCT...CAGCCCTGCCCCAGAGTTCTGAGAAGCTGTTTCAGGGCTATTCCTTTGTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CAA 90 bp GGTCTCCGGGTTATTGCTGTCGGCAGGATTGCTGGGCTGCAGTGTCTTGGTGGGATGAGTCATTTCTTGTaGGCAGACATCTGGAAAACC +
Preference number: 5 (lower is better)
Translates to: GLRVIAVGRIAGLQCLGGMSHFL*ADIWKT
Trigger: GGTTTTCCAGATGTCTGCCAACAAGAAATGACTCAT...CCCACCAAGACACTGCAGCCCAGCAATCCTGCCGACAGCAATAACCCGGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648062.1
CDS-3UTR CAA 90 bp GGGCAGGGCTGCGGGAGAATAAGTGGGATCCATTTCTGTGAACTCTTCTGCAAACACCAGTCAACTGCCTaGTCATGTCCTGAATCTCCC +
Preference number: 5 (lower is better)
Translates to: GQGCGRISGIHFCELFCKHQSTA*SCPESP
Trigger: GGGAGATTCAGGACATGACAAGGCAGTTGACTGGTG...TTTGCAGAAGAGTTCACAGAAATGGATCCCACTTATTCTCCCGCAGCCCTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CAA 90 bp GAGCAACAAAGGAATAGCCCTGAAACAGCTTCTCAGAACTCTGGGGCAGGGCTGCCTTCTCCCAGGGGTTaGTCCTTCAAATCTAGGTCA +
Preference number: 5 (lower is better)
Translates to: EQQRNSPETASQNSGAGLPSPRG*SFKSRS
Trigger: TGACCTAGATTTGAAGGACAAACCCCTGGGAGAAGG...CAGCCCTGCCCCAGAGTTCTGAGAAGCTGTTTCAGGGCTATTCCTTTGTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CAA 90 bp TCTTTCCTCTGGGATCCCGTCAGCTTCTCCTTCCCCAGAGGTCCTGACATTGCTCATCACCTGTATACATaGTCACTCCCTATTTCCCCC +
Preference number: 5 (lower is better)
Translates to: SFLWDPVSFSFPRGPDIAHHLYT*SLPISP
Trigger: GGGGGAAATAGGGAGTGACAATGTATACAGGTGATG...AGCAATGTCAGGACCTCTGGGGAAGGAGAAGCTGACGGGATCCCAGAGGAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp GATGAATTAGCTACTGCTTATCAGGCAACTAACAGAGCCGGCAACAGAAAGGTTAGGTGGCAGGATCGCTaGAGCCCAGCCTGGGCAACA +
Preference number: 5 (lower is better)
Translates to: DELATAYQATNRAGNRKVRWQDR*SPAWAT
Trigger: TGTTGCCCAGGCTGGGCTCAAGCGATCCTGCCACCT...AACCTTTCTGTTGCCGGCTCTGTTAGTTGCCTGATAAGCAGTAGCTAATTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp TTCCTAGGACCTTCAGGAGCTCAAAATTTTCTATTCCCACCTTCTCAGCATGTCGTCCGCAGCTCGTGCTaGACAGTGAGGAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: FLGPSGAQNFLFPPSQHVVRSSC*TVRSCS
Trigger: AGAGCAGCTCCTCACTGTCAAGCACGAGCTGCGGAC...GACATGCTGAGAAGGTGGGAATAGAAAATTTTGAGCTCCTGAAGGTCCTAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556594.1
CDS-3UTR CAA 90 bp CCTGGCAACATTTGTCACTCCAGGACGTTCAACTCCCATGTGAAACTGAAGAGGCACCAGTCAACTGCCTaGTCATGTCCTGAATCTCCC +
Preference number: 5 (lower is better)
Translates to: PGNICHSRTFNSHVKLKRHQSTA*SCPESP
Trigger: GGGAGATTCAGGACATGACAAGGCAGTTGACTGGTG...CCTCTTCAGTTTCACATGGGAGTTGAACGTCCTGGAGTGACAAATGTTGCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CAA 90 bp CGAGCTGAGCAGCTCTTAGTACTGAGGAGGGAAAGGTTGGAATTCAAGGTCACCGGTGCAGGCACTTTTTaGGCGGCTAAATCATCCCAA +
Preference number: 5 (lower is better)
Translates to: RAEQLLVLRRERLEFKVTGAGTF*AAKSSQ
Trigger: TTGGGATGATTTAGCCGCCAAAAAAGTGCCTGCACC...GGTGACCTTGAATTCCAACCTTTCCCTCCTCAGTACTAAGAGCTGCTCAGCTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp CGAGCTGAGCAGCTCTTAGTACTGAGGAGGGAAAGGTTGGAATTCAAGGTCACCGTTTTAGTGCTCCATTaGGACTGGTCTCTGGCCACT +
Preference number: 5 (lower is better)
Translates to: RAEQLLVLRRERLEFKVTVLVLH*DWSLAT
Trigger: AGTGGCCAGAGACCAGTCCAAATGGAGCACTAAAAC...GGTGACCTTGAATTCCAACCTTTCCCTCCTCAGTACTAAGAGCTGCTCAGCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATGTCCGCAGCTCGTGCTaGACAGTGAGGAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNVRSSC*TVRSCS
Trigger: AGAGCAGCTCCTCACTGTCAAGCACGAGCTGCGGAC...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR CAA 90 bp TCATGTCCTGAATCTCCCCCTCTGACAATATCTGGTGCCATGTATTCAATAGTTGTCCGCAGCTCGTGCTaGACAGTGAGGAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: SCPESPPLTISGAMYSIVVRSSC*TVRSCS
Trigger: AGAGCAGCTCCTCACTGTCAAGCACGAGCTGCGGAC...AACTATTGAATACATGGCACCAGATATTGTCAGAGGGGGAGATTCAGGACATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554206.1
ENST00000648062.1
CDS-3UTR CAA 90 bp TACCTTCTCCCAGGGGTTTGTCCTTCAAATCTAGGTCATAGTGTTGATAGAATGGTCCGCAGCTCGTGCTaGACAGTGAGGAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: YLLPGVCPSNLGHSVDRMVRSSC*TVRSCS
Trigger: AGAGCAGCTCCTCACTGTCAAGCACGAGCTGCGGAC...CATTCTATCAACACTATGACCTAGATTTGAAGGACAAACCCCTGGGAGAAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648062.1
CDS-3UTR CAA 90 bp TCATCATTGCACTCCTGGCAACATTTGTCACTCCAGGACGTTCAACTCCCATGTCACCAGTCAACTGCCTaGTCATGTCCTGAATCTCCC +
Preference number: 5 (lower is better)
Translates to: SSLHSWQHLSLQDVQLPCHQSTA*SCPESP
Trigger: GGGAGATTCAGGACATGACAAGGCAGTTGACTGGTG...ACATGGGAGTTGAACGTCCTGGAGTGACAAATGTTGCCAGGAGTGCAATGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CAA 90 bp TATTTGTTAAAGGCGTGGAAGGTTGCTTTCACACAGGTATGCACGGCAGCTCCGGGTGCAGGCACTTTTTaGGCGGCTAAATCATCCCAA +
Preference number: 5 (lower is better)
Translates to: YLLKAWKVAFTQVCTAAPGAGTF*AAKSSQ
Trigger: TTGGGATGATTTAGCCGCCAAAAAAGTGCCTGCACC...CGGAGCTGCCGTGCATACCTGTGTGAAAGCAACCTTCCACGCCTTTAACAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CAA 90 bp TCTTTCCTCTGGGATCCCGTCAGCTTCTCCTTCCCCAGAGGTCCTGACATTGCTATACAATACGTGGCCTaGTGTGTCTGGTTTCTTTAC +
Preference number: 5 (lower is better)
Translates to: SFLWDPVSFSFPRGPDIAIQYVA*CVWFLY
Trigger: GTAAAGAAACCAGACACACAAGGCCACGTATTGTAT...AGCAATGTCAGGACCTCTGGGGAAGGAGAAGCTGACGGGATCCCAGAGGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp ACCCACATTGTCCACAAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTGTCCGCAGCTCGTGCTaGACAGTGAGGAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: THIVHKAKQKVSSQYESFVRSSC*TVRSCS
Trigger: AGAGCAGCTCCTCACTGTCAAGCACGAGCTGCGGAC...AAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTTGTGGACAATGTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CAA 90 bp CGAGCTGAGCAGCTCTTAGTACTGAGGAGGGAAAGGTTGGAATTCAAGGTCACCTATATAATCCCCAACTaGTGGAGATGTTCGAGGGCA +
Preference number: 5 (lower is better)
Translates to: RAEQLLVLRRERLEFKVTYIIPN*WRCSRA
Trigger: TGCCCTCGAACATCTCCACAAGTTGGGGATTATATA...GGTGACCTTGAATTCCAACCTTTCCCTCCTCAGTACTAAGAGCTGCTCAGCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp CAGGGCTGCGGGAGAATAAGTGGGATCCATTTCTGTGAACTCTTCTGCAAAGTTCACTCCTGGCAACATTaGTCACTCCAGGACGTTCAA +
Preference number: 5 (lower is better)
Translates to: QGCGRISGIHFCELFCKVHSWQH*SLQDVQ
Trigger: TTGAACGTCCTGGAGTGACAAATGTTGCCAGGAGTG...AACTTTGCAGAAGAGTTCACAGAAATGGATCCCACTTATTCTCCCGCAGCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CAA 90 bp GCCTTGTCATGTCCTGAATCTCCCCCTCTGACAATATCTGGTGCCATGTATTCACACTCCTGGCAACATTaGTCACTCCAGGACGTTCAA +
Preference number: 5 (lower is better)
Translates to: ALSCPESPPLTISGAMYSHSWQH*SLQDVQ
Trigger: TTGAACGTCCTGGAGTGACAAATGTTGCCAGGAGTG...TGAATACATGGCACCAGATATTGTCAGAGGGGGAGATTCAGGACATGACAAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CAA 90 bp AGCTCCACAGGTCACAGGACTCATCGTAGCCGTTCTGATTCAAGAGCTCTGGGGTTGGCTTCCATCCTTTaGCTGATTATTTTGACTGCA +
Preference number: 5 (lower is better)
Translates to: SSTGHRTHRSRSDSRALGLASIL*LIILTA
Trigger: TGCAGTCAAAATAATCAGCAAAAGGATGGAAGCCAA...CCCCAGAGCTCTTGAATCAGAACGGCTACGATGAGTCCTGTGACCTGTGGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CAA 90 bp TTAAAGGCGTGGAAGGTTGCTTTCACACAGGTATGCACGGCAGCTCCGGAAGATCCCTCTCTCTTGTATTaGTTAAAGGCGTGGAAGGTT +
Preference number: 5 (lower is better)
Translates to: LKAWKVAFTQVCTAAPEDPSLLY*LKAWKV
Trigger: AACCTTCCACGCCTTTAACAAATACAAGAGAGAGGG...ATCTTCCGGAGCTGCCGTGCATACCTGTGTGAAAGCAACCTTCCACGCCTTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CAA 90 bp CATGACACAACATGCCCCATTCTACTTGTTGCATACAAAGTAGAAGAGGAATGTGCGATCCTCCACATGTaGGCCTCCCATGAGCCACCA +
Preference number: 5 (lower is better)
Translates to: HDTTCPILLVAYKVEEECAILHM*ASHEPP
Trigger: TGGTGGCTCATGGGAGGCCAACATGTGGAGGATCGC...ACATTCCTCTTCTACTTTGTATGCAACAAGTAGAATGGGGCATGTTGTGTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp AAGCATAAAAGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACTGGATGTCAGTGTTaGGAGCAGTGGGCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: KHKRSPQAYAEGIKVQWITGCQC*EQWAAG
Trigger: TCCTGCTGCCCACTGCTCCAAACACTGACATCCAGT...GATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCTTTTATGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp TCACTATCTATATGTAGTTTTAGTGCTCCATTTGGACTGGTCTCTGGCCACTGGTGGTGTGGTGCGATCTaGGCTCACTGCAAGTTCTGC +
Preference number: 5 (lower is better)
Translates to: SLSICSFSAPFGLVSGHWWCGAI*AHCKFC
Trigger: GCAGAACTTGCAGTGAGCCAAGATCGCACCACACCA...CCAGTGGCCAGAGACCAGTCCAAATGGAGCACTAAAACTACATATAGATAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS TCA 90 bp CTCTGTATCTTGCCCACTCAGGACCTTTCTTCCTCACAGTTTCAGTaGGATGCCTGCAATAGCTCTTTTGCTTTTCTGCAGATGGCATGC +
Preference number: 5 (lower is better)
Translates to: LCILPTQDLSSSQFQ*DACNSSFAFLQMAC
Trigger: GCATGCCATCTGCAGAAAAGCAAAAGAGCTATTGCAGGCATCTCACTGAAACTGTGAGGAAGAAAGGTCCTGAGTGGGCAAGATACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556304.1
CDS-3UTR CAA 90 bp AGAACTCTGGGGCAGGGCTGCGGGAGAATAAGTGGGATCCATTTCTGTGAACTCTGTGGTTTTGGCCTTTaGAACGATTGTTGCCTTTTT +
Preference number: 5 (lower is better)
Translates to: RTLGQGCGRISGIHFCELCGFGL*NDCCLF
Trigger: AAAAAGGCAACAATCGTTCAAAAGGCCAAAACCACA...GAGTTCACAGAAATGGATCCCACTTATTCTCCCGCAGCCCTGCCCCAGAGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CAA 90 bp CGAGCTGAGCAGCTCTTAGTACTGAGGAGGGAAAGGTTGGAATTCAAGGTCACCTACTGTGAGAAGTCCTaGGATCAAATCTTTAGCCTC +
Preference number: 5 (lower is better)
Translates to: RAEQLLVLRRERLEFKVTYCEKS*DQIFSL
Trigger: GAGGCTAAAGATTTGATCCAAGGACTTCTCACAGTA...GGTGACCTTGAATTCCAACCTTTCCCTCCTCAGTACTAAGAGCTGCTCAGCTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp CCACCGCGCTGGTACACGTCAAACTTCGGTCATGAGATTGGAAGGGAACCTGTCTGGCATCATGCTAGGTaGCTAAAAAGAGTAATATGT +
Preference number: 5 (lower is better)
Translates to: PPRWYTSNFGHEIGREPVWHHAR*LKRVIC
Trigger: ACATATTACTCTTTTTAGCAACCTAGCATGATGCCA...GACAGGTTCCCTTCCAATCTCATGACCGAAGTTTGACGTGTACCAGCGCGGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648062.1
CDS-3UTR CAA 90 bp AAGCATAAAAGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCCTGAGGAGGGAAAGGTaGGAATTCAAGGTCACCGAG +
Preference number: 5 (lower is better)
Translates to: KHKRSPQAYAEGIKVQWILRRER*EFKVTE
Trigger: CTCGGTGACCTTGAATTCCAACCTTTCCCTCCTCAG...GATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCTTTTATGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp CAGGGCTGCGGGAGAATAAGTGGGATCCATTTCTGTGAACTCTTCTGCAAAGTTTATATAATCCCCAACTaGTGGAGATGTTCGAGGGCA +
Preference number: 5 (lower is better)
Translates to: QGCGRISGIHFCELFCKVYIIPN*WRCSRA
Trigger: TGCCCTCGAACATCTCCACAAGTTGGGGATTATATA...AACTTTGCAGAAGAGTTCACAGAAATGGATCCCACTTATTCTCCCGCAGCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554206.1
ENST00000648062.1
CDS-3UTR CAA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATCACCAGTCAACTGCCTaGTCATGTCCTGAATCTCCC +
Preference number: 5 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNHQSTA*SCPESP
Trigger: GGGAGATTCAGGACATGACAAGGCAGTTGACTGGTG...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR CAA 90 bp AAGCATAAAAGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCGGTGCAGGCACTTTTTaGGCGGCTAAATCATCCCAA +
Preference number: 5 (lower is better)
Translates to: KHKRSPQAYAEGIKVQWIGAGTF*AAKSSQ
Trigger: TTGGGATGATTTAGCCGCCAAAAAAGTGCCTGCACC...GATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCTTTTATGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CAA 90 bp GATGAATTAGCTACTGCTTATCAGGCAACTAACAGAGCCGGCAACAGAAAGGTTCACTCCTGGCAACATTaGTCACTCCAGGACGTTCAA +
Preference number: 5 (lower is better)
Translates to: DELATAYQATNRAGNRKVHSWQH*SLQDVQ
Trigger: TTGAACGTCCTGGAGTGACAAATGTTGCCAGGAGTG...AACCTTTCTGTTGCCGGCTCTGTTAGTTGCCTGATAAGCAGTAGCTAATTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp GAGGATTGGAGGACAGCTGACTTCCATCTTGTAGCCATTCATTGTACCTCAAGCTGCAACTTCACAATATaGGGGTGTCCTTCACAGAGT +
Preference number: 5 (lower is better)
Translates to: EDWRTADFHLVAIHCTSSCNFTI*GCPSQS
Trigger: ACTCTGTGAAGGACACCCCAATATTGTGAAGTTGCA...GCTTGAGGTACAATGAATGGCTACAAGATGGAAGTCAGCTGTCCTCCAATCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CAA 90 bp CTGTGCACCACTCCAACATCATGCATGTGGCTTACAGCTGAAACAAGCTTCCTCTCTTGTAGCCATTCATaGTACCTCAAGCCAGACATT +
Preference number: 5 (lower is better)
Translates to: LCTTPTSCMWLTAETSFLSCSHS*YLKPDI
Trigger: AATGTCTGGCTTGAGGTACAATGAATGGCTACAAGA...GAGGAAGCTTGTTTCAGCTGTAAGCCACATGCATGATGTTGGAGTGGTGCACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CAA 90 bp CAGGGCTGCGGGAGAATAAGTGGGATCCATTTCTGTGAACTCTTCTGCAAAGTTCAAAACCCCTCTCTCTaGTATTTGTTAAAGGCGTGG +
Preference number: 5 (lower is better)
Translates to: QGCGRISGIHFCELFCKVQNPSL*YLLKAW
Trigger: CCACGCCTTTAACAAATACAAGAGAGAGGGGTTTTG...AACTTTGCAGAAGAGTTCACAGAAATGGATCCCACTTATTCTCCCGCAGCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CAA 90 bp CCATCAACAGTGAAAGGAGATGCTCCAGTTAGTAATTCATACATTAGAACACCCCTGGGCTGCAGTGTCTaGGTGGGTGTAGTTTTACCG +
Preference number: 5 (lower is better)
Translates to: PSTVKGDAPVSNSYIRTPLGCSV*VGVVLP
Trigger: CGGTAAAACTACACCCACCAAGACACTGCAGCCCAG...GGGTGTTCTAATGTATGAATTACTAACTGGAGCATCTCCTTTCACTGTTGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CAA 90 bp AAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATAGGGTCTCCGGGTTATaGCTGTCGGCAGGATTGCTG +
Preference number: 5 (lower is better)
Translates to: KAKQKVSSQYESFLVGRHRVSGL*LSAGLL
Trigger: CAGCAATCCTGCCGACAGCAATAACCCGGAGACCCT...ATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CAA 90 bp GATGAATTAGCTACTGCTTATCAGGCAACTAACAGAGCCGGCAACAGAAAGGTTAGGCAGGCTCATCAGTaGACAGCTAGCCTATCTTTC +
Preference number: 5 (lower is better)
Translates to: DELATAYQATNRAGNRKVRQAHQ*TASLSF
Trigger: GAAAGATAGGCTAGCTGTCAACTGATGAGCCTGCCT...AACCTTTCTGTTGCCGGCTCTGTTAGTTGCCTGATAAGCAGTAGCTAATTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp AGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACTGATACAACTATGTTGCCCAGGTaGGTCTCTAACTCCTGGTTT +
Preference number: 5 (lower is better)
Translates to: RSPQAYAEGIKVQWITDTTMLPR*VSNSWF
Trigger: AAACCAGGAGTTAGAGACCAACCTGGGCAACATAGT...TGTATCAGTGATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp CATGACACAACATGCCCCATTCTACTTGTTGCATACAAAGTAGAAGAGGAATGTGGGTGGACAACAGCCTaGTGTAGGGGAAGCATTTGG +
Preference number: 5 (lower is better)
Translates to: HDTTCPILLVAYKVEEECGWTTA*CRGSIW
Trigger: CCAAATGCTTCCCCTACACAAGGCTGTTGTCCACCC...ACATTCCTCTTCTACTTTGTATGCAACAAGTAGAATGGGGCATGTTGTGTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp AAGCATAAAAGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCTGCTGGCAAGTATTCTaGGGGCAAACAGGAAAAGGG +
Preference number: 5 (lower is better)
Translates to: KHKRSPQAYAEGIKVQWICWQVF*GQTGKG
Trigger: CCCTTTTCCTGTTTGCCCCAAGAATACTTGCCAGCA...GATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCTTTTATGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp ACCCACATTGTCCACAAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTGCTTCCGGCAGGAAATaGCACTGGGTGAGCTCTAAG +
Preference number: 5 (lower is better)
Translates to: THIVHKAKQKVSSQYESFASGRK*HWVSSK
Trigger: CTTAGAGCTCACCCAGTGCAATTTCCTGCCGGAAGC...AAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTTGTGGACAATGTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp GACGCTGAATTAGGTCTTTCGCTAAAGCACTCATTTCTTGGGGATATGGAGGCTAATGTGTTCCAGGACTaGTCGTTCTGTCCTTGTATG +
Preference number: 5 (lower is better)
Translates to: DAELGLSLKHSFLGDMEANVFQD*SFCPCM
Trigger: CATACAAGGACAGAACGACAAGTCCTGGAACACATT...AGCCTCCATATCCCCAAGAAATGAGTGCTTTAGCGAAAGACCTAATTCAGCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CAA 90 bp AGAGGGTCTATGACAGCTGCATTACGCTTGAATAGGATGGAAGGAGCAACAAAGTATATAATCCCCAACTaGTGGAGATGTTCGAGGGCA +
Preference number: 5 (lower is better)
Translates to: RGSMTAALRLNRMEGATKYIIPN*WRCSRA
Trigger: TGCCCTCGAACATCTCCACAAGTTGGGGATTATATA...CTTTGTTGCTCCTTCCATCCTATTCAAGCGTAATGCAGCTGTCATAGACCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554206.1
ENST00000648062.1
CDS-3UTR CAA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATGGTGCAGGCACTTTTTaGGCGGCTAAATCATCCCAA +
Preference number: 5 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNGAGTF*AAKSSQ
Trigger: TTGGGATGATTTAGCCGCCAAAAAAGTGCCTGCACC...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR CAA 90 bp AGATGTTCTTTGATTTCATCTGCATCACGTGGACCACATCCCAATCTCTTCTTGGGTGCAGGCACTTTTTaGGCGGCTAAATCATCCCAA +
Preference number: 5 (lower is better)
Translates to: RCSLISSASRGPHPNLFLGAGTF*AAKSSQ
Trigger: TTGGGATGATTTAGCCGCCAAAAAAGTGCCTGCACC...CAAGAAGAGATTGGGATGTGGTCCACGTGATGCAGATGAAATCAAAGAACATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CAA 90 bp TCAGGGGCTGATTATCCGGTGGCTTTAGCCGTGCAAATCCAAAATCAATTATTTGGTGCAGGCACTTTTTaGGCGGCTAAATCATCCCAA +
Preference number: 5 (lower is better)
Translates to: SGADYPVALAVQIQNQLFGAGTF*AAKSSQ
Trigger: TTGGGATGATTTAGCCGCCAAAAAAGTGCCTGCACC...AAATAATTGATTTTGGATTTGCACGGCTAAAGCCACCGGATAATCAGCCCCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CAA 90 bp AGGACAGCTGACTTCCATCTTGTAGCCATTCATTGTACCTCAAGCCAGACATTTACAGCTGCATTACGCTaGAATAGGATGGAAGGAGCA +
Preference number: 5 (lower is better)
Translates to: RTADFHLVAIHCTSSQTFTAALR*NRMEGA
Trigger: TGCTCCTTCCATCCTATTCAAGCGTAATGCAGCTGT...AAATGTCTGGCTTGAGGTACAATGAATGGCTACAAGATGGAAGTCAGCTGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CAA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATCACTCCTGGCAACATTaGTCACTCCAGGACGTTCAA +
Preference number: 5 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNHSWQH*SLQDVQ
Trigger: TTGAACGTCCTGGAGTGACAAATGTTGCCAGGAGTG...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR CAA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATCCTTCTCCCAGGGGTTaGTCCTTCAAATCTAGGTCA +
Preference number: 5 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNPSPRG*SFKSRS
Trigger: TGACCTAGATTTGAAGGACAAACCCCTGGGAGAAGG...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR CAA 90 bp AGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACTGATACACAAATCTTTAGCCTCTaGGGATACATTCTTCCAGGC +
Preference number: 5 (lower is better)
Translates to: RSPQAYAEGIKVQWITDTQIFSL*GYILPG
Trigger: GCCTGGAAGAATGTATCCCAAGAGGCTAAAGATTTG...TGTATCAGTGATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CAA 90 bp AGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACTGATACACCCTCTCTCTTGTATTaGTTAAAGGCGTGGAAGGTT +
Preference number: 5 (lower is better)
Translates to: RSPQAYAEGIKVQWITDTPSLLY*LKAWKV
Trigger: AACCTTCCACGCCTTTAACAAATACAAGAGAGAGGG...TGTATCAGTGATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CAA 90 bp TTCTTTTTCTTAATGCGCTCAAACAGTTCTCCTCCATTCAGAAGTTCCATCACTCTGGGCTGCAGTGTCTaGGTGGGTGTAGTTTTACCG +
Preference number: 5 (lower is better)
Translates to: FFFLMRSNSSPPFRSSITLGCSV*VGVVLP
Trigger: CGGTAAAACTACACCCACCAAGACACTGCAGCCCAG...AGTGATGGAACTTCTGAATGGAGGAGAACTGTTTGAGCGCATTAAGAAAAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CAA 90 bp TGTTGGCATCATGCTAGGTTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTACTGCACAAGCACCTGTaGGTGAGGTCACCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: CWHHARLLKRVICALFTVLHKHL*VRSPGR
Trigger: CCTTCCTGGTGACCTCACCAACAGGTGCTTGTGCAG...TACTGTGAATAGAGCACATATTACTCTTTTTAGCAACCTAGCATGATGCCAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp GATGAATTAGCTACTGCTTATCAGGCAACTAACAGAGCCGGCAACAGAAAGGTTGTGACTTGCAAAGGTTaGCCCCAGAAGGGCTTTTTA +
Preference number: 5 (lower is better)
Translates to: DELATAYQATNRAGNRKVVTCKG*PQKGFL
Trigger: TAAAAAGCCCTTCTGGGGCAAACCTTTGCAAGTCAC...AACCTTTCTGTTGCCGGCTCTGTTAGTTGCCTGATAAGCAGTAGCTAATTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATACAGCTGCATTACGCTaGAATAGGATGGAAGGAGCA +
Preference number: 5 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNTAALR*NRMEGA
Trigger: TGCTCCTTCCATCCTATTCAAGCGTAATGCAGCTGT...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR CAA 90 bp AAGCATAAAAGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCTGCAACTTCACAATATaGGGGTGTCCTTCACAGAGT +
Preference number: 5 (lower is better)
Translates to: KHKRSPQAYAEGIKVQWICNFTI*GCPSQS
Trigger: ACTCTGTGAAGGACACCCCAATATTGTGAAGTTGCA...GATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCTTTTATGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CAA 90 bp TTCAACTCCCATGTGAAACTGAAGAGGGTCTATGACAGCTGCATTACGCTTGAACAAATCTTTAGCCTCTaGGGATACATTCTTCCAGGC +
Preference number: 5 (lower is better)
Translates to: FNSHVKLKRVYDSCITLEQIFSL*GYILPG
Trigger: GCCTGGAAGAATGTATCCCAAGAGGCTAAAGATTTG...TTCAAGCGTAATGCAGCTGTCATAGACCCTCTTCAGTTTCACATGGGAGTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CAA 90 bp AAGCATAAAAGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCCAAATCTTTAGCCTCTaGGGATACATTCTTCCAGGC +
Preference number: 5 (lower is better)
Translates to: KHKRSPQAYAEGIKVQWIQIFSL*GYILPG
Trigger: GCCTGGAAGAATGTATCCCAAGAGGCTAAAGATTTG...GATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCTTTTATGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CAA 90 bp TCACTATCTATATGTAGTTTTAGTGCTCCATTTGGACTGGTCTCTGGCCACTGGCAAAACCCCTCTCTCTaGTATTTGTTAAAGGCGTGG +
Preference number: 5 (lower is better)
Translates to: SLSICSFSAPFGLVSGHWQNPSL*YLLKAW
Trigger: CCACGCCTTTAACAAATACAAGAGAGAGGGGTTTTG...CCAGTGGCCAGAGACCAGTCCAAATGGAGCACTAAAACTACATATAGATAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp TTTTCTCCATCAACAGTGAAAGGAGATGCTCCAGTTAGTAATTCATACATTAGAAGGGTCTCCGGGTTATaGCTGTCGGCAGGATTGCTG +
Preference number: 5 (lower is better)
Translates to: FSPSTVKGDAPVSNSYIRRVSGL*LSAGLL
Trigger: CAGCAATCCTGCCGACAGCAATAACCCGGAGACCCT...TCTAATGTATGAATTACTAACTGGAGCATCTCCTTTCACTGTTGATGGAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CAA 90 bp AGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACTGATACAATGAGTCATTTCTTGTaGGCAGACATCTGGAAAACC +
Preference number: 5 (lower is better)
Translates to: RSPQAYAEGIKVQWITDTMSHFL*ADIWKT
Trigger: GGTTTTCCAGATGTCTGCCAACAAGAAATGACTCAT...TGTATCAGTGATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CAA 90 bp CATGACACAACATGCCCCATTCTACTTGTTGCATACAAAGTAGAAGAGGAATGTTGGAGTTTCTCCCTTTaGGTCAGGCTGTTCTCCAAC +
Preference number: 5 (lower is better)
Translates to: HDTTCPILLVAYKVEEECWSFSL*VRLFSN
Trigger: GTTGGAGAACAGCCTGACCAAAAGGGAGAAACTCCA...ACATTCCTCTTCTACTTTGTATGCAACAAGTAGAATGGGGCATGTTGTGTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp CCTAGGACCTTCAGGAGCTCAAAATTTTCTATTCCCACCTTCTCAGCATGTCCTTGTGGTTTTGGCCTTTaGAACGATTGTTGCCTTTTT +
Preference number: 5 (lower is better)
Translates to: PRTFRSSKFSIPTFSACPCGFGL*NDCCLF
Trigger: AAAAAGGCAACAATCGTTCAAAAGGCCAAAACCACA...AGGACATGCTGAGAAGGTGGGAATAGAAAATTTTGAGCTCCTGAAGGTCCTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000556594.1
CDS-3UTR CAA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATAATGTGTTCCAGGACTaGTCGTTCTGTCCTTGTATG +
Preference number: 5 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNNVFQD*SFCPCM
Trigger: CATACAAGGACAGAACGACAAGTCCTGGAACACATT...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR CAA 90 bp TCAGGGGCTGATTATCCGGTGGCTTTAGCCGTGCAAATCCAAAATCAATTATTTAATGTGTTCCAGGACTaGTCGTTCTGTCCTTGTATG +
Preference number: 5 (lower is better)
Translates to: SGADYPVALAVQIQNQLFNVFQD*SFCPCM
Trigger: CATACAAGGACAGAACGACAAGTCCTGGAACACATT...AAATAATTGATTTTGGATTTGCACGGCTAAAGCCACCGGATAATCAGCCCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CAA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATTATATAATCCCCAACTaGTGGAGATGTTCGAGGGCA +
Preference number: 5 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNYIIPN*WRCSRA
Trigger: TGCCCTCGAACATCTCCACAAGTTGGGGATTATATA...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR CAA 90 bp TGTTGGCATCATGCTAGGTTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTACACCAGTCAACTGCCTaGTCATGTCCTGAATCTCCC +
Preference number: 5 (lower is better)
Translates to: CWHHARLLKRVICALFTVHQSTA*SCPESP
Trigger: GGGAGATTCAGGACATGACAAGGCAGTTGACTGGTG...TACTGTGAATAGAGCACATATTACTCTTTTTAGCAACCTAGCATGATGCCAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CAA 90 bp AGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATCTGGAAACCTTCTCCCAGGGGTTaGTCCTTCAAATCTAGGTCA +
Preference number: 5 (lower is better)
Translates to: SKRYHHSMSHFLLADIWKPSPRG*SFKSRS
Trigger: TGACCTAGATTTGAAGGACAAACCCCTGGGAGAAGG...TTTCCAGATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CAA 90 bp TGTCCTTCAAATCTAGGTCATAGTGTTGATAGAATGGAGAGTCCTTCATCATTGCCTTCTCCCAGGGGTTaGTCCTTCAAATCTAGGTCA +
Preference number: 5 (lower is better)
Translates to: CPSNLGHSVDRMESPSSLPSPRG*SFKSRS
Trigger: TGACCTAGATTTGAAGGACAAACCCCTGGGAGAAGG...CAATGATGAAGGACTCTCCATTCTATCAACACTATGACCTAGATTTGAAGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CAA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATTGCAACTTCACAATATaGGGGTGTCCTTCACAGAGT +
Preference number: 5 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNCNFTI*GCPSQS
Trigger: ACTCTGTGAAGGACACCCCAATATTGTGAAGTTGCA...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR CAA 90 bp TCATCATTGCACTCCTGGCAACATTTGTCACTCCAGGACGTTCAACTCCCATGTGACATTTTAAGCCTTTaGTTTGGATCTACTGTGAGA +
Preference number: 5 (lower is better)
Translates to: SSLHSWQHLSLQDVQLPCDILSL*FGSTVR
Trigger: TCTCACAGTAGATCCAAACAAAAGGCTTAAAATGTC...ACATGGGAGTTGAACGTCCTGGAGTGACAAATGTTGCCAGGAGTGCAATGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CAA 90 bp GAAAACAGACCCCTTTCTCTGATAAATCATTGTTTGAAGGGTGCAAATTTCAAACTGGGCTGCAGTGTCTaGGTGGGTGTAGTTTTACCG +
Preference number: 5 (lower is better)
Translates to: ENRPLSLINHCLKGANFKLGCSV*VGVVLP
Trigger: CGGTAAAACTACACCCACCAAGACACTGCAGCCCAG...TTTGAAATTTGCACCCTTCAAACAATGATTTATCAGAGAAAGGGGTCTGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CAA 90 bp AAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCTTTTGTGTAGTGGCATGACCTaGGCTCACTGCAACCTCTGC +
Preference number: 5 (lower is better)
Translates to: KKSNMCSIHSNILCPVLLCSGMT*AHCNLC
Trigger: GCAGAGGTTGCAGTGAGCCAAGGTCATGCCACTACA...CAAAAGCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp AGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACTGATACAGATTGGAATGATATCTaGAAAATGGTGAACCTAGGC +
Preference number: 5 (lower is better)
Translates to: RSPQAYAEGIKVQWITDTDWNDI*KMVNLG
Trigger: GCCTAGGTTCACCATTTTCAAGATATCATTCCAATC...TGTATCAGTGATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp AAGCATAAAAGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCAGTAATCCCACTTGGTaGAAGAGACAAAAGTTGGAG +
Preference number: 5 (lower is better)
Translates to: KHKRSPQAYAEGIKVQWISNPTW*KRQKLE
Trigger: CTCCAACTTTTGTCTCTTCAACCAAGTGGGATTACT...GATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCTTTTATGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp ACCCACATTGTCCACAAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTCTCATAGTTAGGGAATaGGGCTTGCAAAAGGTAGGC +
Preference number: 5 (lower is better)
Translates to: THIVHKAKQKVSSQYESFLIVRE*GLQKVG
Trigger: GCCTACCTTTTGCAAGCCCAATTCCCTAACTATGAG...AAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTTGTGGACAATGTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp AAACATTTCCTATTTTGCACTAGGGTGAAGAAACCAAGACACAAACATTTGGAAGGGAGGCTGAGTGATTaGCTCAGGGTCACCAAGTCT +
Preference number: 5 (lower is better)
Translates to: KHFLFCTRVKKPRHKHLEGRLSD*LRVTKS
Trigger: AGACTTGGTGACCCTGAGCAAATCACTCAGCCTCCC...TTCCAAATGTTTGTGTCTTGGTTTCTTCACCCTAGTGCAAAATAGGAAATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp AGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCACTGATACATCATTCTACCCATCTTaGGAATCAGTGTACCTTATG +
Preference number: 5 (lower is better)
Translates to: RSPQAYAEGIKVQWITDTSFYPS*ESVYLM
Trigger: CATAAGGTACACTGATTCCAAAGATGGGTAGAATGA...TGTATCAGTGATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp ACCCACATTGTCCACAAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTTATATAATCCCCAACTaGTGGAGATGTTCGAGGGCA +
Preference number: 5 (lower is better)
Translates to: THIVHKAKQKVSSQYESFYIIPN*WRCSRA
Trigger: TGCCCTCGAACATCTCCACAAGTTGGGGATTATATA...AAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTTGTGGACAATGTGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CAA 90 bp AAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATACAGCTGCATTACGCTaGAATAGGATGGAAGGAGCA +
Preference number: 5 (lower is better)
Translates to: KAKQKVSSQYESFLVGRHTAALR*NRMEGA
Trigger: TGCTCCTTCCATCCTATTCAAGCGTAATGCAGCTGT...ATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CAA 90 bp TCACTATCTATATGTAGTTTTAGTGCTCCATTTGGACTGGTCTCTGGCCACTGGCACACTTTCGACAAATaGAAAAACTACCTTCTCCCA +
Preference number: 5 (lower is better)
Translates to: SLSICSFSAPFGLVSGHWHTFDK*KNYLLP
Trigger: TGGGAGAAGGTAGTTTTTCAATTTGTCGAAAGTGTG...CCAGTGGCCAGAGACCAGTCCAAATGGAGCACTAAAACTACATATAGATAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp AAGCATAAAAGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCCACACTTTCGACAAATaGAAAAACTACCTTCTCCCA +
Preference number: 5 (lower is better)
Translates to: KHKRSPQAYAEGIKVQWIHTFDK*KNYLLP
Trigger: TGGGAGAAGGTAGTTTTTCAATTTGTCGAAAGTGTG...GATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCTTTTATGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CAA 90 bp AGGACAGCTGACTTCCATCTTGTAGCCATTCATTGTACCTCAAGCCAGACATTTTTGGCTTCCATCCTTTaGCTGATTATTTTGACTGCA +
Preference number: 5 (lower is better)
Translates to: RTADFHLVAIHCTSSQTFLASIL*LIILTA
Trigger: TGCAGTCAAAATAATCAGCAAAAGGATGGAAGCCAA...AAATGTCTGGCTTGAGGTACAATGAATGGCTACAAGATGGAAGTCAGCTGTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CAA 90 bp TCACTATCTATATGTAGTTTTAGTGCTCCATTTGGACTGGTCTCTGGCCACTGGTTGGCTTCCATCCTTTaGCTGATTATTTTGACTGCA +
Preference number: 5 (lower is better)
Translates to: SLSICSFSAPFGLVSGHWLASIL*LIILTA
Trigger: TGCAGTCAAAATAATCAGCAAAAGGATGGAAGCCAA...CCAGTGGCCAGAGACCAGTCCAAATGGAGCACTAAAACTACATATAGATAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp TCACTATCTATATGTAGTTTTAGTGCTCCATTTGGACTGGTCTCTGGCCACTGGTTTCAAAAACCCACATaGTCCACAAGGCAAAGCAAA +
Preference number: 5 (lower is better)
Translates to: SLSICSFSAPFGLVSGHWFQKPT*STRQSK
Trigger: TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAA...CCAGTGGCCAGAGACCAGTCCAAATGGAGCACTAAAACTACATATAGATAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp TTCAACTCCCATGTGAAACTGAAGAGGGTCTATGACAGCTGCATTACGCTTGAATTTCAAAAACCCACATaGTCCACAAGGCAAAGCAAA +
Preference number: 5 (lower is better)
Translates to: FNSHVKLKRVYDSCITLEFQKPT*STRQSK
Trigger: TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAA...TTCAAGCGTAATGCAGCTGTCATAGACCCTCTTCAGTTTCACATGGGAGTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648062.1
CDS-3UTR CAA 90 bp TTGATCCTTGATGTGAGAATAACTGTATTCCTTGCATGTTCAGAATGTCCTTATAAGCAATCCTTCCTCTaGGCCTCCCAAAGTGTTGGG +
Preference number: 5 (lower is better)
Translates to: LILDVRITVFLACSECPYKQSFL*ASQSVG
Trigger: CCCAACACTTTGGGAGGCCAAGAGGAAGGATTGCTT...ATAAGGACATTCTGAACATGCAAGGAATACAGTTATTCTCACATCAAGGATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp CATGACACAACATGCCCCATTCTACTTGTTGCATACAAAGTAGAAGAGGAATGTTACAGTGGTACAATCTaGGTTCACTGCAACTTCTGC +
Preference number: 5 (lower is better)
Translates to: HDTTCPILLVAYKVEEECYSGTI*VHCNFC
Trigger: GCAGAAGTTGCAGTGAACCAAGATTGTACCACTGTA...ACATTCCTCTTCTACTTTGTATGCAACAAGTAGAATGGGGCATGTTGTGTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp AAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATAGACACAAGAATCACTaGAACCTAGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: KAKQKVSSQYESFLVGRHRHKNH*NLGGGG
Trigger: ACCTCCACCTCCTAGGTTCAAGTGATTCTTGTGTCT...ATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp CATGACACAACATGCCCCATTCTACTTGTTGCATACAAAGTAGAAGAGGAATGTACATCCTTTCCCTTCTaGCTCCCTCCCATAAATACT +
Preference number: 5 (lower is better)
Translates to: HDTTCPILLVAYKVEEECTSFPF*LPPINT
Trigger: AGTATTTATGGGAGGGAGCAAGAAGGGAAAGGATGT...ACATTCCTCTTCTACTTTGTATGCAACAAGTAGAATGGGGCATGTTGTGTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp TTGATCCTTGATGTGAGAATAACTGTATTCCTTGCATGTTCAGAATGTCCTTATTGCCAGCTGAGTGACTaGCAAAGGTTTGCCCCAGAA +
Preference number: 5 (lower is better)
Translates to: LILDVRITVFLACSECPYCQLSD*QRFAPE
Trigger: TTCTGGGGCAAACCTTTGCAAGTCACTCAGCTGGCA...ATAAGGACATTCTGAACATGCAAGGAATACAGTTATTCTCACATCAAGGATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATTGTGGTTTTGGCCTTTaGAACGATTGTTGCCTTTTT +
Preference number: 5 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNCGFGL*NDCCLF
Trigger: AAAAAGGCAACAATCGTTCAAAAGGCCAAAACCACA...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR CAA 90 bp GATGAATTAGCTACTGCTTATCAGGCAACTAACAGAGCCGGCAACAGAAAGGTTTGTGAAACGCTCTCTTaGAGAAAGATGAGTAAAAAG +
Preference number: 5 (lower is better)
Translates to: DELATAYQATNRAGNRKVCETLS*RKMSKK
Trigger: CTTTTTACTCATCTTTCTCAAAGAGAGCGTTTCACA...AACCTTTCTGTTGCCGGCTCTGTTAGTTGCCTGATAAGCAGTAGCTAATTCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp CATACATTAGAACACCCAAACTCCACCAGTCAACTGCCTTGTCATGTCCTGAATTGTGAAACGCTCTCTTaGAGAAAGATGAGTAAAAAG +
Preference number: 5 (lower is better)
Translates to: HTLEHPNSTSQLPCHVLNCETLS*RKMSKK
Trigger: CTTTTTACTCATCTTTCTCAAAGAGAGCGTTTCACA...ATTCAGGACATGACAAGGCAGTTGACTGGTGGAGTTTGGGTGTTCTAATGTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554206.1
ENST00000648062.1
CDS-3UTR CAA 90 bp AAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCTTTTGCACTCCTGGCAACATTaGTCACTCCAGGACGTTCAA +
Preference number: 5 (lower is better)
Translates to: KKSNMCSIHSNILCPVLLHSWQH*SLQDVQ
Trigger: TTGAACGTCCTGGAGTGACAAATGTTGCCAGGAGTG...CAAAAGCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CAA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATCACACTTTCGACAAATaGAAAAACTACCTTCTCCCA +
Preference number: 5 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNHTFDK*KNYLLP
Trigger: TGGGAGAAGGTAGTTTTTCAATTTGTCGAAAGTGTG...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR CAA 90 bp AAGAGATGTTCTTTGATTTCATCTGCATCACGTGGACCACATCCCAATCTCTTCCACACTTTCGACAAATaGAAAAACTACCTTCTCCCA +
Preference number: 5 (lower is better)
Translates to: KRCSLISSASRGPHPNLFHTFDK*KNYLLP
Trigger: TGGGAGAAGGTAGTTTTTCAATTTGTCGAAAGTGTG...GAAGAGATTGGGATGTGGTCCACGTGATGCAGATGAAATCAAAGAACATCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CAA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATTTGGCTTCCATCCTTTaGCTGATTATTTTGACTGCA +
Preference number: 5 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNLASIL*LIILTA
Trigger: TGCAGTCAAAATAATCAGCAAAAGGATGGAAGCCAA...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR CAA 90 bp TGTCCTTCAAATCTAGGTCATAGTGTTGATAGAATGGAGAGTCCTTCATCATTGTGCAACTTCACAATATaGGGGTGTCCTTCACAGAGT +
Preference number: 5 (lower is better)
Translates to: CPSNLGHSVDRMESPSSLCNFTI*GCPSQS
Trigger: ACTCTGTGAAGGACACCCCAATATTGTGAAGTTGCA...CAATGATGAAGGACTCTCCATTCTATCAACACTATGACCTAGATTTGAAGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CAA 90 bp ACCCACATTGTCCACAAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTTACTGTGAGAAGTCCTaGGATCAAATCTTTAGCCTC +
Preference number: 5 (lower is better)
Translates to: THIVHKAKQKVSSQYESFYCEKS*DQIFSL
Trigger: GAGGCTAAAGATTTGATCCAAGGACTTCTCACAGTA...AAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTTGTGGACAATGTGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CAA 90 bp CTTCACAATATTGGGGTGTCCTTCACAGAGTTTCAGAGCTGTTATTTCCTTTTGTACTGTGAGAAGTCCTaGGATCAAATCTTTAGCCTC +
Preference number: 5 (lower is better)
Translates to: LHNIGVSFTEFQSCYFLLYCEKS*DQIFSL
Trigger: GAGGCTAAAGATTTGATCCAAGGACTTCTCACAGTA...CAAAAGGAAATAACAGCTCTGAAACTCTGTGAAGGACACCCCAATATTGTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CAA 90 bp CAAGCCAGACATTTTAAGCCTTTTGTTTGGATCTACTGTGAGAAGTCCTTGGATTACTGTGAGAAGTCCTaGGATCAAATCTTTAGCCTC +
Preference number: 5 (lower is better)
Translates to: QARHFKPFVWIYCEKSLDYCEKS*DQIFSL
Trigger: GAGGCTAAAGATTTGATCCAAGGACTTCTCACAGTA...ATCCAAGGACTTCTCACAGTAGATCCAAACAAAAGGCTTAAAATGTCTGGCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CAA 90 bp AGGACAGCTGACTTCCATCTTGTAGCCATTCATTGTACCTCAAGCCAGACATTTGACATTTTAAGCCTTTaGTTTGGATCTACTGTGAGA +
Preference number: 5 (lower is better)
Translates to: RTADFHLVAIHCTSSQTFDILSL*FGSTVR
Trigger: TCTCACAGTAGATCCAAACAAAAGGCTTAAAATGTC...AAATGTCTGGCTTGAGGTACAATGAATGGCTACAAGATGGAAGTCAGCTGTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CAA 90 bp ACCCACATTGTCCACAAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTTCTTGTAGCCATTCATaGTACCTCAAGCCAGACATT +
Preference number: 5 (lower is better)
Translates to: THIVHKAKQKVSSQYESFSCSHS*YLKPDI
Trigger: AATGTCTGGCTTGAGGTACAATGAATGGCTACAAGA...AAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTTGTGGACAATGTGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CAA 90 bp CTTCACAATATTGGGGTGTCCTTCACAGAGTTTCAGAGCTGTTATTTCCTTTTGTCTTGTAGCCATTCATaGTACCTCAAGCCAGACATT +
Preference number: 5 (lower is better)
Translates to: LHNIGVSFTEFQSCYFLLSCSHS*YLKPDI
Trigger: AATGTCTGGCTTGAGGTACAATGAATGGCTACAAGA...CAAAAGGAAATAACAGCTCTGAAACTCTGTGAAGGACACCCCAATATTGTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CAA 90 bp TTGTTTGAAGGGTGCAAATTTCAAAAACCCACATTGTCCACAAGGCAAAGCAAACCCTCTCTCTTGTATTaGTTAAAGGCGTGGAAGGTT +
Preference number: 5 (lower is better)
Translates to: LFEGCKFQKPTLSTRQSKPSLLY*LKAWKV
Trigger: AACCTTCCACGCCTTTAACAAATACAAGAGAGAGGG...TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAATTTGCACCCTTCAAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CAA 90 bp AAGCATAAAAGATCGCCTCAGGCATATGCTGAGGGAATAAAGGTGCAATGGATCTGGCATCATGCTAGGTaGCTAAAAAGAGTAATATGT +
Preference number: 5 (lower is better)
Translates to: KHKRSPQAYAEGIKVQWIWHHAR*LKRVIC
Trigger: ACATATTACTCTTTTTAGCAACCTAGCATGATGCCA...GATCCATTGCACCTTTATTCCCTCAGCATATGCCTGAGGCGATCTTTTATGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CAA 90 bp GAAAACAGACCCCTTTCTCTGATAAATCATTGTTTGAAGGGTGCAAATTTCAAAGACAATAACAGGCGCTaGAAATGGGGGCAAGGTGAA +
Preference number: 5 (lower is better)
Translates to: ENRPLSLINHCLKGANFKDNNRR*KWGQGE
Trigger: TTCACCTTGCCCCCATTTCAAGCGCCTGTTATTGTC...TTTGAAATTTGCACCCTTCAAACAATGATTTATCAGAGAAAGGGGTCTGTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp TTGTTTGAAGGGTGCAAATTTCAAAAACCCACATTGTCCACAAGGCAAAGCAAAGTTAGGGAATTGGGCTaGCAAAAGGTAGGCCAAATA +
Preference number: 5 (lower is better)
Translates to: LFEGCKFQKPTLSTRQSKVRELG*QKVGQI
Trigger: TATTTGGCCTACCTTTTGCAAGCCCAATTCCCTAAC...TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAATTTGCACCCTTCAAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp GATGAATTAGCTACTGCTTATCAGGCAACTAACAGAGCCGGCAACAGAAAGGTTGAGTTTCAACTCAAATaGTCAAATAATTGTGCTCCC +
Preference number: 5 (lower is better)
Translates to: DELATAYQATNRAGNRKVEFQLK*SNNCAP
Trigger: GGGAGCACAATTATTTGACAATTTGAGTTGAAACTC...AACCTTTCTGTTGCCGGCTCTGTTAGTTGCCTGATAAGCAGTAGCTAATTCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp GATGAATTAGCTACTGCTTATCAGGCAACTAACAGAGCCGGCAACAGAAAGGTTTTTCATCTCTTTGCTTaGCCAGGAACAAAGTTTCAA +
Preference number: 5 (lower is better)
Translates to: DELATAYQATNRAGNRKVFHLFA*PGTKFQ
Trigger: TTGAAACTTTGTTCCTGGCAAAGCAAAGAGATGAAA...AACCTTTCTGTTGCCGGCTCTGTTAGTTGCCTGATAAGCAGTAGCTAATTCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp ACCCACATTGTCCACAAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTCCACTAATTTCCAGTTaGCCACATGAAAGGCATACT +
Preference number: 5 (lower is better)
Translates to: THIVHKAKQKVSSQYESFPLISS*PHERHT
Trigger: AGTATGCCTTTCATGTGGCAAACTGGAAATTAGTGG...AAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTTGTGGACAATGTGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp CCATCAACAGTGAAAGGAGATGCTCCAGTTAGTAATTCATACATTAGAACACCCTGTGGTTTTGGCCTTTaGAACGATTGTTGCCTTTTT +
Preference number: 5 (lower is better)
Translates to: PSTVKGDAPVSNSYIRTPCGFGL*NDCCLF
Trigger: AAAAAGGCAACAATCGTTCAAAAGGCCAAAACCACA...GGGTGTTCTAATGTATGAATTACTAACTGGAGCATCTCCTTTCACTGTTGATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CAA 90 bp ACCCACATTGTCCACAAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTTGTGGTTTTGGCCTTTaGAACGATTGTTGCCTTTTT +
Preference number: 5 (lower is better)
Translates to: THIVHKAKQKVSSQYESFCGFGL*NDCCLF
Trigger: AAAAAGGCAACAATCGTTCAAAAGGCCAAAACCACA...AAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTTGTGGACAATGTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CAA 90 bp ATGCAACTTCACAATATTGGGGTGTCCTTCACAGAGTTTCAGAGCTGTTATTTCTGTGGTTTTGGCCTTTaGAACGATTGTTGCCTTTTT +
Preference number: 5 (lower is better)
Translates to: MQLHNIGVSFTEFQSCYFCGFGL*NDCCLF
Trigger: AAAAAGGCAACAATCGTTCAAAAGGCCAAAACCACA...GAAATAACAGCTCTGAAACTCTGTGAAGGACACCCCAATATTGTGAAGTTGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CAA 90 bp TTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCAATGTGTTCCAGGACTaGTCGTTCTGTCCTTGTATG +
Preference number: 5 (lower is better)
Translates to: LLKRVICALFTVTFSVQCNVFQD*SFCPCM
Trigger: CATACAAGGACAGAACGACAAGTCCTGGAACACATT...GCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTTAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CAA 90 bp TCAACAGTGAAAGGAGATGCTCCAGTTAGTAATTCATACATTAGAACACCCAAAAATGTGTTCCAGGACTaGTCGTTCTGTCCTTGTATG +
Preference number: 5 (lower is better)
Translates to: STVKGDAPVSNSYIRTPKNVFQD*SFCPCM
Trigger: CATACAAGGACAGAACGACAAGTCCTGGAACACATT...TTTGGGTGTTCTAATGTATGAATTACTAACTGGAGCATCTCCTTTCACTGTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CAA 90 bp CCCAGAAACTTCCCCCATGTTTGGGAGATCTTTAATAATGGTGCTAGACTGAATTGTGAAACGCTCTCTTaGAGAAAGATGAGTAAAAAG +
Preference number: 5 (lower is better)
Translates to: PRNFPHVWEIFNNGARLNCETLS*RKMSKK
Trigger: CTTTTTACTCATCTTTCTCAAAGAGAGCGTTTCACA...ATTCAGTCTAGCACCATTATTAAAGATCTCCCAAACATGGGGGAAGTTTCTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000418736.6
CDS-3UTR CAA 90 bp AACTCTTCTGCAAAGTTACTCACATCTAATTCATCTCGAATGACTGGCTTAAATACAGCTGCATTACGCTaGAATAGGATGGAAGGAGCA +
Preference number: 5 (lower is better)
Translates to: NSSAKLLTSNSSRMTGLNTAALR*NRMEGA
Trigger: TGCTCCTTCCATCCTATTCAAGCGTAATGCAGCTGT...ATTTAAGCCAGTCATTCGAGATGAATTAGATGTGAGTAACTTTGCAGAAGAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000554206.1
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CAA 90 bp GAAAACAGACCCCTTTCTCTGATAAATCATTGTTTGAAGGGTGCAAATTTCAAAACAGCTGCATTACGCTaGAATAGGATGGAAGGAGCA +
Preference number: 5 (lower is better)
Translates to: ENRPLSLINHCLKGANFKTAALR*NRMEGA
Trigger: TGCTCCTTCCATCCTATTCAAGCGTAATGCAGCTGT...TTTGAAATTTGCACCCTTCAAACAATGATTTATCAGAGAAAGGGGTCTGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CAA 90 bp TGTTGGCATCATGCTAGGTTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTATGCAACTTCACAATATaGGGGTGTCCTTCACAGAGT +
Preference number: 5 (lower is better)
Translates to: CWHHARLLKRVICALFTVCNFTI*GCPSQS
Trigger: ACTCTGTGAAGGACACCCCAATATTGTGAAGTTGCA...TACTGTGAATAGAGCACATATTACTCTTTTTAGCAACCTAGCATGATGCCAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CAA 90 bp AGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATCTGGAAATCTTGTAGCCATTCATaGTACCTCAAGCCAGACATT +
Preference number: 5 (lower is better)
Translates to: SKRYHHSMSHFLLADIWKSCSHS*YLKPDI
Trigger: AATGTCTGGCTTGAGGTACAATGAATGGCTACAAGA...TTTCCAGATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CAA 90 bp TCAACAGTGAAAGGAGATGCTCCAGTTAGTAATTCATACATTAGAACACCCAAACAAAACCCCTCTCTCTaGTATTTGTTAAAGGCGTGG +
Preference number: 5 (lower is better)
Translates to: STVKGDAPVSNSYIRTPKQNPSL*YLLKAW
Trigger: CCACGCCTTTAACAAATACAAGAGAGAGGGGTTTTG...TTTGGGTGTTCTAATGTATGAATTACTAACTGGAGCATCTCCTTTCACTGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556178.5
ENST00000648062.1
CDS-3UTR CAA 90 bp AAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATATGAGTCATTTCTTGTaGGCAGACATCTGGAAAACC +
Preference number: 5 (lower is better)
Translates to: KAKQKVSSQYESFLVGRHMSHFL*ADIWKT
Trigger: GGTTTTCCAGATGTCTGCCAACAAGAAATGACTCAT...ATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CAA 90 bp AAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATCAATGCAGGGAGAACTaGACGAGCTGCAATAAAATA +
Preference number: 5 (lower is better)
Translates to: KAKQKVSSQYESFLVGRHQCREN*TSCNKI
Trigger: TATTTTATTGCAGCTCGTCAAGTTCTCCCTGCATTG...ATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp AGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATCTGGAAAGACAGTGTCCTATTATaGCTGCCTTTTGATCACATG +
Preference number: 5 (lower is better)
Translates to: SKRYHHSMSHFLLADIWKDSVLL*LPFDHM
Trigger: CATGTGATCAAAAGGCAGCAATAATAGGACACTGTC...TTTCCAGATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp TTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCGAAACATACAGCACTTaGACATCTGTCCGAGCACTA +
Preference number: 5 (lower is better)
Translates to: LLKRVICALFTVTFSVQCETYST*TSVRAL
Trigger: TAGTGCTCGGACAGATGTCAAAGTGCTGTATGTTTC...GCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTTAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp AAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATTTCGCAACCAGCCCTTaGAAACTGGAAACAAAGTTT +
Preference number: 5 (lower is better)
Translates to: KAKQKVSSQYESFLVGRHFATSP*KLETKF
Trigger: AAACTTTGTTTCCAGTTTCAAAGGGCTGGTTGCGAA...ATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS GCA 90 bp CCTCACAGTTTCAGTGAGATGCCTGCAATAGCTCTTTTGCTTTTCTaGAGATGGCATGCATTCTCATGGGTTGTTTATTTATTTCTATTT +
Preference number: 5 (lower is better)
Translates to: PHSFSEMPAIALLLF*RWHAFSWVVYLFLF
Trigger: AAATAGAAATAAATAAACAACCCATGAGAATGCATGCCATCTGCAGAAAAGCAAAAGAGCTATTGCAGGCATCTCACTGAAACTGTGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556304.1
CDS CCA 90 bp AGTTTCAGTGAGATGCCTGCAATAGCTCTTTTGCTTTTCTGCAGATaGCATGCATTCTCATGGGTTGTTTATTTATTTCTATTTGTCCTC +
Preference number: 5 (lower is better)
Translates to: SFSEMPAIALLLFCR*HAFSWVVYLFLFVL
Trigger: GAGGACAAATAGAAATAAATAAACAACCCATGAGAATGCATGCCATCTGCAGAAAAGCAAAAGAGCTATTGCAGGCATCTCACTGAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556304.1
CDS-3UTR CAA 90 bp AGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATCTGGAAATGTGGTTTTGGCCTTTaGAACGATTGTTGCCTTTTT +
Preference number: 5 (lower is better)
Translates to: SKRYHHSMSHFLLADIWKCGFGL*NDCCLF
Trigger: AAAAAGGCAACAATCGTTCAAAAGGCCAAAACCACA...TTTCCAGATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CAA 90 bp AAACATTTCCTATTTTGCACTAGGGTGAAGAAACCAAGACACAAACATTTGGAAAATGTGTTCCAGGACTaGTCGTTCTGTCCTTGTATG +
Preference number: 5 (lower is better)
Translates to: KHFLFCTRVKKPRHKHLENVFQD*SFCPCM
Trigger: CATACAAGGACAGAACGACAAGTCCTGGAACACATT...TTCCAAATGTTTGTGTCTTGGTTTCTTCACCCTAGTGCAAAATAGGAAATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp AAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATCACACTTTCGACAAATaGAAAAACTACCTTCTCCCA +
Preference number: 5 (lower is better)
Translates to: KAKQKVSSQYESFLVGRHHTFDK*KNYLLP
Trigger: TGGGAGAAGGTAGTTTTTCAATTTGTCGAAAGTGTG...ATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CAA 90 bp AGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATCTGGAAATTGGCTTCCATCCTTTaGCTGATTATTTTGACTGCA +
Preference number: 5 (lower is better)
Translates to: SKRYHHSMSHFLLADIWKLASIL*LIILTA
Trigger: TGCAGTCAAAATAATCAGCAAAAGGATGGAAGCCAA...TTTCCAGATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CAA 90 bp AAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCTTTTGCCCTCTCTCTTGTATTaGTTAAAGGCGTGGAAGGTT +
Preference number: 5 (lower is better)
Translates to: KKSNMCSIHSNILCPVLLPSLLY*LKAWKV
Trigger: AACCTTCCACGCCTTTAACAAATACAAGAGAGAGGG...CAAAAGCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CAA 90 bp GAAAACAGACCCCTTTCTCTGATAAATCATTGTTTGAAGGGTGCAAATTTCAAACAAAACCCCTCTCTCTaGTATTTGTTAAAGGCGTGG +
Preference number: 5 (lower is better)
Translates to: ENRPLSLINHCLKGANFKQNPSL*YLLKAW
Trigger: CCACGCCTTTAACAAATACAAGAGAGAGGGGTTTTG...TTTGAAATTTGCACCCTTCAAACAATGATTTATCAGAGAAAGGGGTCTGTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CAA 90 bp ACCCACATTGTCCACAAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTTCAAATGCTGTCTTTTaGGTACTTATAAGTAGGGTG +
Preference number: 5 (lower is better)
Translates to: THIVHKAKQKVSSQYESFSNAVF*VLISRV
Trigger: CACCCTACTTATAAGTACCAAAAAGACAGCATTTGA...AAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTTGTGGACAATGTGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp AAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATCTAACTGCTTCAAACTaGGCATCAAATGCTGTCTTT +
Preference number: 5 (lower is better)
Translates to: KAKQKVSSQYESFLVGRHLTASN*ASNAVF
Trigger: AAAGACAGCATTTGATGCCAAGTTTGAAGCAGTTAG...ATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp TTGTTTGAAGGGTGCAAATTTCAAAAACCCACATTGTCCACAAGGCAAAGCAAACCAAGACACAAACATTaGGAAGCCACTTTAGTTTCT +
Preference number: 5 (lower is better)
Translates to: LFEGCKFQKPTLSTRQSKPRHKH*EATLVS
Trigger: AGAAACTAAAGTGGCTTCCAAATGTTTGTGTCTTGG...TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAATTTGCACCCTTCAAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp AGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATCTGGAAAAAAATTCCTGCATTGTaGGGAAGTGGTAATGTACCA +
Preference number: 5 (lower is better)
Translates to: SKRYHHSMSHFLLADIWKKIPAL*GSGNVP
Trigger: TGGTACATTACCACTTCCCAACAATGCAGGAATTTT...TTTCCAGATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp TTGTTTGAAGGGTGCAAATTTCAAAAACCCACATTGTCCACAAGGCAAAGCAAAAGCTCTGTGTTCATTTaGATTACTTCTTCAAGGCAC +
Preference number: 5 (lower is better)
Translates to: LFEGCKFQKPTLSTRQSKSSVFI*ITSSRH
Trigger: GTGCCTTGAAGAAGTAATCAAAATGAACACAGAGCT...TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAATTTGCACCCTTCAAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp ACCCACATTGTCCACAAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTTACATTTACAATGTCTaGCAACCATTACCACTACCT +
Preference number: 5 (lower is better)
Translates to: THIVHKAKQKVSSQYESFYIYNV*QPLPLP
Trigger: AGGTAGTGGTAATGGTTGCAAGACATTGTAAATGTA...AAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTTGTGGACAATGTGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp TTGTTTGAAGGGTGCAAATTTCAAAAACCCACATTGTCCACAAGGCAAAGCAAAAGGAAAATCAACACATaGTCTCACAGCTTTCTTACC +
Preference number: 5 (lower is better)
Translates to: LFEGCKFQKPTLSTRQSKRKINT*SHSFLT
Trigger: GGTAAGAAAGCTGTGAGACAATGTGTTGATTTTCCT...TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAATTTGCACCCTTCAAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp AAACATTTCCTATTTTGCACTAGGGTGAAGAAACCAAGACACAAACATTTGGAAACTGGAAACAAAGTTTaGGCCAGAGATGAACACGCA +
Preference number: 5 (lower is better)
Translates to: KHFLFCTRVKKPRHKHLETGNKV*ARDEHA
Trigger: TGCGTGTTCATCTCTGGCCAAAACTTTGTTTCCAGT...TTCCAAATGTTTGTGTCTTGGTTTCTTCACCCTAGTGCAAAATAGGAAATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp AAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATTGTGAAACGCTCTCTTaGAGAAAGATGAGTAAAAAG +
Preference number: 5 (lower is better)
Translates to: KAKQKVSSQYESFLVGRHCETLS*RKMSKK
Trigger: CTTTTTACTCATCTTTCTCAAAGAGAGCGTTTCACA...ATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CAA 90 bp TCTGCAAAGTTACTCACATCTAATTCATCTCGAATGACTGGCTTAAATGGTGCATGTGAAACGCTCTCTTaGAGAAAGATGAGTAAAAAG +
Preference number: 5 (lower is better)
Translates to: SAKLLTSNSSRMTGLNGACETLS*RKMSKK
Trigger: CTTTTTACTCATCTTTCTCAAAGAGAGCGTTTCACA...TGCACCATTTAAGCCAGTCATTCGAGATGAATTAGATGTGAGTAACTTTGCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554206.1
ENST00000648062.1
CDS-3UTR CAA 90 bp AAGGCAAAGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATGACATTTTAAGCCTTTaGTTTGGATCTACTGTGAGA +
Preference number: 5 (lower is better)
Translates to: KAKQKVSSQYESFLVGRHDILSL*FGSTVR
Trigger: TCTCACAGTAGATCCAAACAAAAGGCTTAAAATGTC...ATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCTTTGCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CAA 90 bp AGCAAAAGGTATCATCACAGTATGAGTCATTTCTTGTTGGCAGACATCTGGAAAGACATTTTAAGCCTTTaGTTTGGATCTACTGTGAGA +
Preference number: 5 (lower is better)
Translates to: SKRYHHSMSHFLLADIWKDILSL*FGSTVR
Trigger: TCTCACAGTAGATCCAAACAAAAGGCTTAAAATGTC...TTTCCAGATGTCTGCCAACAAGAAATGACTCATACTGTGATGATACCTTTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CAA 90 bp TGTTGGCATCATGCTAGGTTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTATTTCAAAAACCCACATaGTCCACAAGGCAAAGCAAA +
Preference number: 5 (lower is better)
Translates to: CWHHARLLKRVICALFTVFQKPT*STRQSK
Trigger: TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAA...TACTGTGAATAGAGCACATATTACTCTTTTTAGCAACCTAGCATGATGCCAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000536315.6
ENST00000614987.5
ENST00000648062.1
CDS-3UTR CAA 90 bp TTGTTTGAAGGGTGCAAATTTCAAAAACCCACATTGTCCACAAGGCAAAGCAAAAGAGTGCAACAGTGTTaGTTAAGGTCTTTTCAAAAG +
Preference number: 5 (lower is better)
Translates to: LFEGCKFQKPTLSTRQSKRVQQC*LRSFQK
Trigger: CTTTTGAAAAGACCTTAACAAACACTGTTGCACTCT...TTTGCTTTGCCTTGTGGACAATGTGGGTTTTTGAAATTTGCACCCTTCAAACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp GAAAACAGACCCCTTTCTCTGATAAATCATTGTTTGAAGGGTGCAAATTTCAAATCATTTAGCATGTTATaGGAGGTCCTGATCAGCTCA +
Preference number: 5 (lower is better)
Translates to: ENRPLSLINHCLKGANFKSFSML*EVLISS
Trigger: TGAGCTGATCAGGACCTCCAATAACATGCTAAATGA...TTTGAAATTTGCACCCTTCAAACAATGATTTATCAGAGAAAGGGGTCTGTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp AAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCTTTTGTTGAAGAGACAAAAGTaGGAGCTTGGGAAAGTAGCT +
Preference number: 5 (lower is better)
Translates to: KKSNMCSIHSNILCPVLLLKRQK*ELGKVA
Trigger: AGCTACTTTCCCAAGCTCCAACTTTTGTCTCTTCAA...CAAAAGCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp GAAAACAGACCCCTTTCTCTGATAAATCATTGTTTGAAGGGTGCAAATTTCAAAGTACAAGGTCCAACTTaGCATCTAACTTCAACACAC +
Preference number: 5 (lower is better)
Translates to: ENRPLSLINHCLKGANFKVQGPT*HLTSTH
Trigger: GTGTGTTGAAGTTAGATGCAAAGTTGGACCTTGTAC...TTTGAAATTTGCACCCTTCAAACAATGATTTATCAGAGAAAGGGGTCTGTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp TTGCTAAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCCATAAAATTCCTGCATaGTTGGGAAGTGGTAATGTA +
Preference number: 5 (lower is better)
Translates to: LLKRVICALFTVTFSVQCHKIPA*LGSGNV
Trigger: TACATTACCACTTCCCAACAATGCAGGAATTTTATG...GCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTTAGCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp TTGATCCTTGATGTGAGAATAACTGTATTCCTTGCATGTTCAGAATGTCCTTATTGGTGGGTATGTAAATaGGTACAACCATTGTTGAAA +
Preference number: 5 (lower is better)
Translates to: LILDVRITVFLACSECPYWWVCK*VQPLLK
Trigger: TTTCAACAATGGTTGTACCAATTTACATACCCACCA...ATAAGGACATTCTGAACATGCAAGGAATACAGTTATTCTCACATCAAGGATCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp AAAAAGAGTAATATGTGCTCTATTCACAGTAACATTCTCTGTCCAGTGCTTTTGGAGGCCAGAATAATCTaGATACCAAAACTTGACAAA +
Preference number: 5 (lower is better)
Translates to: KKSNMCSIHSNILCPVLLEARII*IPKLDK
Trigger: TTTGTCAAGTTTTGGTATCAAGATTATTCTGGCCTC...CAAAAGCACTGGACAGAGAATGTTACTGTGAATAGAGCACATATTACTCTTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp TTGATCCTTGATGTGAGAATAACTGTATTCCTTGCATGTTCAGAATGTCCTTATATACATTTCATCTCTTaGCTTTGCCAGGAACAAAGT +
Preference number: 5 (lower is better)
Translates to: LILDVRITVFLACSECPYIHFIS*LCQEQS
Trigger: ACTTTGTTCCTGGCAAAGCAAAGAGATGAAATGTAT...ATAAGGACATTCTGAACATGCAAGGAATACAGTTATTCTCACATCAAGGATCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS-3UTR CAA 90 bp GAAAACAGACCCCTTTCTCTGATAAATCATTGTTTGAAGGGTGCAAATTTCAAAGTATATGAGCAGGGTTaGATTATTCTGACATCAGAA +
Preference number: 5 (lower is better)
Translates to: ENRPLSLINHCLKGANFKVYEQG*IILTSE
Trigger: TTCTGATGTCAGAATAATCAAACCCTGCTCATATAC...TTTGAAATTTGCACCCTTCAAACAATGATTTATCAGAGAAAGGGGTCTGTTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614987.5
CDS CCA 72 bp GAGGTGCGTGCCACGGGCAGCGGTCGGCGGCTGCGCTaGCCCCGATGCCTGGTGCCCGCCGCTCATTCCCGG +
Preference number: 6 (lower is better)
Translates to: EVRATGSGRRLR*PRCLVPAAHSR
Trigger: CCGGGAATGAGCGGCGGGCACCAGGCATCGGGGCCAGCGCAGCCGCCGACCGCTGCCCGTGGCACGCACCTC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536315.6
CDS GCA 72 bp CCTCGGAGGTGCGTGCCACGGGCAGCGGTCGGCGGCTaGGCTGGCCCCGATGCCTGGTGCCCGCCGCTCATT +
Preference number: 6 (lower is better)
Translates to: PRRCVPRAAVGG*AGPDAWCPPLI
Trigger: AATGAGCGGCGGGCACCAGGCATCGGGGCCAGCGCAGCCGCCGACCGCTGCCCGTGGCACGCACCTCCGAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536315.6
CDS GCA 72 bp CCCTCGCAGCCGCTGCCGCGGCCCCAGGAGTCGGGGTaGGGCGGCTCCAGAACTCGGACGCAAAGACGAGTC +
Preference number: 6 (lower is better)
Translates to: PSQPLPRPQESG*GGSRTRTQRRV
Trigger: GACTCGTCTTTGCGTCCGAGTTCTGGAGCCGCCGCACCCCGACTCCTGGGGCCGCGGCAGCGGCTGCGAGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000418736.6
ENST00000554206.1
ENST00000556594.1
ENST00000614987.5
ENST00000648062.1
CDS CCA 72 bp AGAACTCGGACGCAAAGACGAGTCTCTTTCCCGCTCTaGCCGCACGGCTCGCTCCTCGCCTCCTCCCCCTTC +
Preference number: 6 (lower is better)
Translates to: RTRTQRRVSFPL*PHGSLLASSPF
Trigger: GAAGGGGGAGGAGGCGAGGAGCGAGCCGTGCGGCCAGAGCGGGAAAGAGACTCGTCTTTGCGTCCGAGTTCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554206.1
ENST00000614987.5
CDS GCA 72 bp GGGCAACAGAGTAGACTCGTCTCAGTCCGCAGCTCGTaGTTGACAGTGAGGAGCTGCTCTCCTCCGTCGCCG +
Preference number: 6 (lower is better)
Translates to: GQQSRLVSVRSS*LTVRSCSPPSP
Trigger: CGGCGACGGAGGAGAGCAGCTCCTCACTGTCAAGCACGAGCTGCGGACTGAGACGAGTCTACTCTGTTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556594.1
CDS CAA 72 bp CAACAGAGTAGACTCGTCTCAGTCCGCAGCTCGTGCTaGACAGTGAGGAGCTGCTCTCCTCCGTCGCCGCCG +
Preference number: 6 (lower is better)
Translates to: QQSRLVSVRSSC*TVRSCSPPSPP
Trigger: CGGCGGCGACGGAGGAGAGCAGCTCCTCACTGTCAAGCACGAGCTGCGGACTGAGACGAGTCTACTCTGTTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556594.1
CDS CAA 72 bp GCATGTCCTGTCAAATTAGCAGTCCGCAGCTCGTGCTaGACAGTGAGGAGCTGCTCTCCTCCGTCGCCGCCG +
Preference number: 6 (lower is better)
Translates to: ACPVKLAVRSSC*TVRSCSPPSPP
Trigger: CGGCGGCGACGGAGGAGAGCAGCTCCTCACTGTCAAGCACGAGCTGCGGACTGCTAATTTGACAGGACATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418736.6
ENST00000554206.1
ENST00000614987.5
ENST00000648062.1
CDS GCA 72 bp TCAGCATGTCCTGTCAAATTAGCAGTCCGCAGCTCGTaGTTGACAGTGAGGAGCTGCTCTCCTCCGTCGCCG +
Preference number: 6 (lower is better)
Translates to: SACPVKLAVRSS*LTVRSCSPPSP
Trigger: CGGCGACGGAGGAGAGCAGCTCCTCACTGTCAAGCACGAGCTGCGGACTGCTAATTTGACAGGACATGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418736.6
ENST00000554206.1
ENST00000614987.5
ENST00000648062.1
CDS TCA 72 bp TTGCCCACTCAGGACCTTTCTTCCTCACAGTTTCAGTaGGATGCCTGCAATAGCTCTTTTGCTTTTCTGCAG +
Preference number: 6 (lower is better)
Translates to: LPTQDLSSSQFQ*DACNSSFAFLQ
Trigger: CTGCAGAAAAGCAAAAGAGCTATTGCAGGCATCTCACTGAAACTGTGAGGAAGAAAGGTCCTGAGTGGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556304.1
CDS CAA 72 bp TACCAAAAATGGCGACTGCCTAATGTGTTCCAGGACTaGTCGTTCTGTCCTTGTATGCTCTGTGGTTTTGGC +
Preference number: 6 (lower is better)
Translates to: YQKWRLPNVFQD*SFCPCMLCGFG
Trigger: GCCAAAACCACAGAGCATACAAGGACAGAACGACAAGTCCTGGAACACATTAGGCAGTCGCCATTTTTGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000418736.6
ENST00000536315.6
ENST00000554206.1
ENST00000556178.5
ENST00000614987.5
ENST00000648062.1
CDS GCA 72 bp TTCAGTGAGATGCCTGCAATAGCTCTTTTGCTTTTCTaGAGATGGCATGCATTCTCATGGGTTGTTTATTTA +
Preference number: 6 (lower is better)
Translates to: FSEMPAIALLLF*RWHAFSWVVYL
Trigger: TAAATAAACAACCCATGAGAATGCATGCCATCTGCAGAAAAGCAAAAGAGCTATTGCAGGCATCTCACTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556304.1