RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RPS6KA4 (Homo sapiens)

Ensembl gene IDs: ENSG00000162302

Ensembl transcript IDs: ENST00000334205.9, ENST00000528057.5, ENST00000528355.5, ENST00000530383.1, ENST00000530504.1, ENST00000531659.1, ENST00000532885.5

Found 465 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAGCGGGGGCGAGGAGCGCGCGCTGCCGTCCTGCAGCCACGAGCTaGCCCGCAGTCCCTCGAGCTTCAGCCGCTTGGCGGGGTCCACGG +
Preference number: 1 (lower is better)
Translates to: GAGARSARCRPAATS*PAVPRASAAWRGPR
Trigger: CCGTGGACCCCGCCAAGCGGCTGAAGCTCGAGGGACTGCGGGGCAGCTCGTGGCTGCAGGACGGCAGCGCGCGCTCCTCGCCCCCGCTCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR GCA 90 bp GGCGCCTGGCGCACCAGCTCCAGCACCGAGCGCTCGGTGCGCGTGTaGTCTTGCGTCTTGGCGCGCTGCACCAGCGCCGCCTTGCGCAGC +
Preference number: 1 (lower is better)
Translates to: GAWRTSSSTERSVRV*SCVLARCTSAALRS
Trigger: GCTGCGCAAGGCGGCGCTGGTGCAGCGCGCCAAGACGCAAGAGCACACGCGCACCGAGCGCTCGGTGCTGGAGCTGGTGCGCCAGGCGCC
74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR GCA 90 bp ACTCGAGCACGTCGGGCGTCCGGAGCGGGGGCGAGGAGCGCGCGCTaGCGTCCTGCAGCCACGAGCTGCCCCGCAGTCCCTCGAGCTTCA +
Preference number: 1 (lower is better)
Translates to: TRARRASGAGARSAR*RPAATSCPAVPRAS
Trigger: TGAAGCTCGAGGGACTGCGGGGCAGCTCGTGGCTGCAGGACGGCAGCGCGCGCTCCTCGCCCCCGCTCCGGACGCCCGACGTGCTCGAGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR GCA 90 bp CCAGGAAGGGCGCCTGGCGCACCAGCTCCAGCACCGAGCGCTCGGTaGGCGTGTGCTCTTGCGTCTTGGCGCGCTGCACCAGCGCCGCCT +
Preference number: 1 (lower is better)
Translates to: PGRAPGAPAPAPSAR*ACALASWRAAPAPP
Trigger: AGGCGGCGCTGGTGCAGCGCGCCAAGACGCAAGAGCACACGCGCACCGAGCGCTCGGTGCTGGAGCTGGTGCGCCAGGCGCCCTTCCTGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR GCA 90 bp GCCAGCAGCTCGGGGGCAGCGTACTGCAGCGTGAAGCAGGGCGTCTaGATGGGCACCCCGGGACTCTGCGGCCGCAACCGCGCGAACCCG +
Preference number: 1 (lower is better)
Translates to: ASSSGAAYCSVKQGV*MGTPGLCGRNRANP
Trigger: CGGGTTCGCGCGGTTGCGGCCGCAGAGTCCCGGGGTGCCCATGCAGACGCCCTGCTTCACGCTGCAGTACGCTGCCCCCGAGCTGCTGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR TCA 90 bp CGTAGCCCTGCTGCGCCAGCAGCTCGGGGGCAGCGTACTGCAGCGTaGAGCAGGGCGTCTGCATGGGCACCCCGGGACTCTGCGGCCGCA +
Preference number: 1 (lower is better)
Translates to: RSPAAPAARGQRTAA*SRASAWAPRDSAAA
Trigger: TGCGGCCGCAGAGTCCCGGGGTGCCCATGCAGACGCCCTGCTTCACGCTGCAGTACGCTGCCCCCGAGCTGCTGGCGCAGCAGGGCTACG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR GCA 90 bp CCTGGCCGCTCTGGCGCTGGCGGCAGCGGCGACACACAGAAAAGCTaGCCTGGCCCAGCGCAGGCTCCCGCAGGTCCAGCTCGTACTGCT +
Preference number: 1 (lower is better)
Translates to: PGRSGAGGSGDTQKS*PGPAQAPAGPARTA
Trigger: AGCAGTACGAGCTGGACCTGCGGGAGCCTGCGCTGGGCCAGGGCAGCTTTTCTGTGTGTCGCCGCTGCCGCCAGCGCCAGAGCGGCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR GCA 90 bp GCCCCGGTTGAATGCCATGAAGGTGGCGTTGAGACCCGAGCGCACTaGGGGCCCAGAGGACTCGAGCACGTCGGGCGTCCGGAGCGGGGG +
Preference number: 1 (lower is better)
Translates to: APVECHEGGVETRAH*GPRGLEHVGRPERG
Trigger: CCCCCGCTCCGGACGCCCGACGTGCTCGAGTCCTCTGGGCCCGCAGTGCGCTCGGGTCTCAACGCCACCTTCATGGCATTCAACCGGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR CCA 90 bp CCGCTCTGGCGCTGGCGGCAGCGGCGACACACAGAAAAGCTGCCCTaGCCCAGCGCAGGCTCCCGCAGGTCCAGCTCGTACTGCTGGAAG +
Preference number: 1 (lower is better)
Translates to: PLWRWRQRRHTEKLP*PSAGSRRSSSYCWK
Trigger: CTTCCAGCAGTACGAGCTGGACCTGCGGGAGCCTGCGCTGGGCCAGGGCAGCTTTTCTGTGTGTCGCCGCTGCCGCCAGCGCCAGAGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR CCA 90 bp CCTGCAGCCACGAGCTGCCCCGCAGTCCCTCGAGCTTCAGCCGCTTaGCGGGGTCCACGGTCAGGAGCCCTCGGACCAGCTCCTTGGCTT +
Preference number: 1 (lower is better)
Translates to: PAATSCPAVPRASAA*RGPRSGALGPAPWL
Trigger: AAGCCAAGGAGCTGGTCCGAGGGCTCCTGACCGTGGACCCCGCCAAGCGGCTGAAGCTCGAGGGACTGCGGGGCAGCTCGTGGCTGCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR CCA 90 bp CCCGGCGGGAGGCGGTGGCGCTCCGCAGCTTCTGCTTCCGCCGCTTaGCCAGGGGTGCATTCTCCACGCTCTTCAGGAAGAAGCCCTCCC +
Preference number: 1 (lower is better)
Translates to: PGGRRWRSAASASAA*PGVHSPRSSGRSPP
Trigger: GGGAGGGCTTCTTCCTGAAGAGCGTGGAGAATGCACCCCTGGCCAAGCGGCGGAAGCAGAAGCTGCGGAGCGCCACCGCCTCCCGCCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR GCA 90 bp GGCGGTGGCGCTCCGCAGCTTCTGCTTCCGCCGCTTGGCCAGGGGTaGATTCTCCACGCTCTTCAGGAAGAAGCCCTCCCGCTTGCCCCG +
Preference number: 1 (lower is better)
Translates to: GGGAPQLLLPPLGQG*ILHALQEEALPLAP
Trigger: CGGGGCAAGCGGGAGGGCTTCTTCCTGAAGAGCGTGGAGAATGCACCCCTGGCCAAGCGGCGGAAGCAGAAGCTGCGGAGCGCCACCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR CCA 90 bp GGGCGAGTCCTGCATCATAGCGCTCCTGGCCACCGCTGCCCGACCTaGCCGGTCTCCAGCACCAGGCGCTTCCAGCCCATCGGTCATCAC +
Preference number: 1 (lower is better)
Translates to: GRVLHHSAPGHRCPT*PVSSTRRFQPIGHH
Trigger: GTGATGACCGATGGGCTGGAAGCGCCTGGTGCTGGAGACCGGCCAGGTCGGGCAGCGGTGGCCAGGAGCGCTATGATGCAGGACTCGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR TCA 90 bp CGGCCGACACGAGGCTGCGCAGGATCTGGCTTGCTTCCGACTCGCTaGAGTGCCGCTTCTTGCGGATGTGCTCCAGCAGCTCCCCGCCCC +
Preference number: 1 (lower is better)
Translates to: RPTRGCAGSGLLPTR*SAASCGCAPAAPRP
Trigger: GGGGCGGGGAGCTGCTGGAGCACATCCGCAAGAAGCGGCACTTCAGCGAGTCGGAAGCAAGCCAGATCCTGCGCAGCCTCGTGTCGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR GCA 90 bp CTGGAAGAAGGGCGAGTCCTGCATCATAGCGCTCCTGGCCACCGCTaGCCGACCTGGCCGGTCTCCAGCACCAGGCGCTTCCAGCCCATC +
Preference number: 1 (lower is better)
Translates to: LEEGRVLHHSAPGHR*PTWPVSSTRRFQPI
Trigger: GATGGGCTGGAAGCGCCTGGTGCTGGAGACCGGCCAGGTCGGGCAGCGGTGGCCAGGAGCGCTATGATGCAGGACTCGCCCTTCTTCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR GCA 90 bp GACACGAGGCTGCGCAGGATCTGGCTTGCTTCCGACTCGCTGAAGTaGCGCTTCTTGCGGATGTGCTCCAGCAGCTCCCCGCCCCGCAGC +
Preference number: 1 (lower is better)
Translates to: DTRLRRIWLASDSLK*RFLRMCSSSSPPRS
Trigger: GCTGCGGGGCGGGGAGCTGCTGGAGCACATCCGCAAGAAGCGGCACTTCAGCGAGTCGGAAGCAAGCCAGATCCTGCGCAGCCTCGTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR CCA 90 bp CTGCGACTGAGGATCTTGACTGCGAACTCCTGGCCGCTCTGGCGCTaGCGGCAGCGGCGACACACAGAAAAGCTGCCCTGGCCCAGCGCA +
Preference number: 1 (lower is better)
Translates to: LRLRILTANSWPLWR*RQRRHTEKLPWPSA
Trigger: TGCGCTGGGCCAGGGCAGCTTTTCTGTGTGTCGCCGCTGCCGCCAGCGCCAGAGCGGCCAGGAGTTCGCAGTCAAGATCCTCAGTCGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR CCA 90 bp TCCAGCCTGCGACTGAGGATCTTGACTGCGAACTCCTGGCCGCTCTaGCGCTGGCGGCAGCGGCGACACACAGAAAAGCTGCCCTGGCCC +
Preference number: 1 (lower is better)
Translates to: SSLRLRILTANSWPL*RWRQRRHTEKLPWP
Trigger: GGGCCAGGGCAGCTTTTCTGTGTGTCGCCGCTGCCGCCAGCGCCAGAGCGGCCAGGAGTTCGCAGTCAAGATCCTCAGTCGCAGGCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR TCA 90 bp TCCGTCGAGACACCTCAGCCTGCGTGTTCCTCTCGCCCTCCAGGGTaGAGGGCGAGGCCCCCGTCAGCAGCTCGAAGAGCAAGATGCCCA +
Preference number: 1 (lower is better)
Translates to: SVETPQPACSSRPPG*RARPPSAARRARCP
Trigger: TGGGCATCTTGCTCTTCGAGCTGCTGACGGGGGCCTCGCCCTTCACCCTGGAGGGCGAGAGGAACACGCAGGCTGAGGTGTCTCGACGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR GCA 90 bp TACTGCAGCGTGAAGCAGGGCGTCTGCATGGGCACCCCGGGACTCTaGGGCCGCAACCGCGCGAACCCGAAGTCGATGATTTTCACCGGG +
Preference number: 1 (lower is better)
Translates to: YCSVKQGVCMGTPGL*GRNRANPKSMIFTG
Trigger: CCCGGTGAAAATCATCGACTTCGGGTTCGCGCGGTTGCGGCCGCAGAGTCCCGGGGTGCCCATGCAGACGCCCTGCTTCACGCTGCAGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR TCA 90 bp CAGCTGGTCGTGATGCACCTCGTGCAGATTCACCACGTTGGGGTGTaGCTGGCACAGGCGCAGGGCAGCCACTTCGCGCTGCGTGTTCGC +
Preference number: 1 (lower is better)
Translates to: QLVVMHLVQIHHVGV*LAQAQGSHFALRVR
Trigger: GCGAACACGCAGCGCGAAGTGGCTGCCCTGCGCCTGTGCCAGTCACACCCCAACGTGGTGAATCTGCACGAGGTGCATCACGACCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR CCA 90 bp GTGTTCGCCTCCAGCCTGCGACTGAGGATCTTGACTGCGAACTCCTaGCCGCTCTGGCGCTGGCGGCAGCGGCGACACACAGAAAAGCTG +
Preference number: 1 (lower is better)
Translates to: VFASSLRLRILTANS*PLWRWRQRRHTEKL
Trigger: CAGCTTTTCTGTGTGTCGCCGCTGCCGCCAGCGCCAGAGCGGCCAGGAGTTCGCAGTCAAGATCCTCAGTCGCAGGCTGGAGGCGAACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR CCA 90 bp ACGTGTGCAGCTGGTCGTGATGCACCTCGTGCAGATTCACCACGTTaGGGTGTGACTGGCACAGGCGCAGGGCAGCCACTTCGCGCTGCG +
Preference number: 1 (lower is better)
Translates to: TCAAGRDAPRADSPR*GVTGTGAGQPLRAA
Trigger: CGCAGCGCGAAGTGGCTGCCCTGCGCCTGTGCCAGTCACACCCCAACGTGGTGAATCTGCACGAGGTGCATCACGACCAGCTGCACACGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR GCA 90 bp GTGCATGAAGCTCACGGCCGACACGAGGCTGCGCAGGATCTGGCTTaGTTCCGACTCGCTGAAGTGCCGCTTCTTGCGGATGTGCTCCAG +
Preference number: 1 (lower is better)
Translates to: VHEAHGRHEAAQDLA*FRLAEVPLLADVLQ
Trigger: CTGGAGCACATCCGCAAGAAGCGGCACTTCAGCGAGTCGGAAGCAAGCCAGATCCTGCGCAGCCTCGTGTCGGCCGTGAGCTTCATGCAC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR CCA 90 bp CCAGCTCTGAGCGGATTTGGGGCCGGAATGGGGCTGGAATCTTCCTaGCAGCCAGAGCCACCCAATCGAGGCCCTGGAAGAAGGGATGGT +
Preference number: 1 (lower is better)
Translates to: PALSGFGAGMGLESS*QPEPPNRGPGRRDG
Trigger: ACCATCCCTTCTTCCAGGGCCTCGATTGGGTGGCTCTGGCTGCCAGGAAGATTCCAGCCCCATTCCGGCCCCAAATCCGCTCAGAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR CCA 90 bp TCCTCGTGCATGAAGCTCACGGCCGACACGAGGCTGCGCAGGATCTaGCTTGCTTCCGACTCGCTGAAGTGCCGCTTCTTGCGGATGTGC +
Preference number: 1 (lower is better)
Translates to: SSCMKLTADTRLRRI*LASDSLKCRFLRMC
Trigger: GCACATCCGCAAGAAGCGGCACTTCAGCGAGTCGGAAGCAAGCCAGATCCTGCGCAGCCTCGTGTCGGCCGTGAGCTTCATGCACGAGGA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR CCA 90 bp TCGAGGCCCTGGAAGAAGGGATGGTTCCGGACTTCTTGTGCCCCCTaGGGCCCCGCGCCCAATCGCTTCTTAGGATCCTTACAAAGCAGC +
Preference number: 1 (lower is better)
Translates to: SRPWKKGWFRTSCAP*GPAPNRFLGSLQSS
Trigger: GCTGCTTTGTAAGGATCCTAAGAAGCGATTGGGCGCGGGGCCCCAGGGGGCACAAGAAGTCCGGAACCATCCCTTCTTCCAGGGCCTCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR TCA 90 bp CTCCAGCCGAGTGAATTCCTCCGCAAAGTTGCCCACATCCAGCTCTaGGCGGATTTGGGGCCGGAATGGGGCTGGAATCTTCCTGGCAGC +
Preference number: 1 (lower is better)
Translates to: LQPSEFLRKVAHIQL*ADLGPEWGWNLPGS
Trigger: GCTGCCAGGAAGATTCCAGCCCCATTCCGGCCCCAAATCCGCTCAGAGCTGGATGTGGGCAACTTTGCGGAGGAATTCACTCGGCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR CCA 90 bp GTGAATTCCTCCGCAAAGTTGCCCACATCCAGCTCTGAGCGGATTTaGGGCCGGAATGGGGCTGGAATCTTCCTGGCAGCCAGAGCCACC +
Preference number: 1 (lower is better)
Translates to: VNSSAKLPTSSSERI*GRNGAGIFLAARAT
Trigger: GGTGGCTCTGGCTGCCAGGAAGATTCCAGCCCCATTCCGGCCCCAAATCCGCTCAGAGCTGGATGTGGGCAACTTTGCGGAGGAATTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR CCA 90 bp CTTCCAGCCCATCGGTCATCACCGCGTTGTTGTGGTCAAAGAGAATaGAGGGTGCCACAAAGGAGTATCCCTGAAAGATTCGGGGGTCCC +
Preference number: 1 (lower is better)
Translates to: LPAHRSSPRCCGQRE*RVPQRSIPERFGGP
Trigger: GGGACCCCCGAATCTTTCAGGGATACTCCTTTGTGGCACCCTCCATTCTCTTTGACCACAACAACGCGGTGATGACCGATGGGCTGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR GCA 90 bp CGGCGGGAGGCGGTGGCGCTCCGCAGCTTCTGCTTCCGCCGCTTGGCCAGGGGTGCTCCTGGCCACCGCTaGCCGACCTGGCCGGTCTCC +
Preference number: 2 (lower is better)
Translates to: RREAVALRSFCFRRLARGAPGHR*PTWPVS
Trigger: GGAGACCGGCCAGGTCGGGCAGCGGTGGCCAGGAGC...ACCCCTGGCCAAGCGGCGGAAGCAGAAGCTGCGGAGCGCCACCGCCTCCCGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR CCA 90 bp CGGCGGGAGGCGGTGGCGCTCCGCAGCTTCTGCTTCCGCCGCTTGGCCAGGGGTAACTCCTGGCCGCTCTaGCGCTGGCGGCAGCGGCGA +
Preference number: 2 (lower is better)
Translates to: RREAVALRSFCFRRLARGNSWPL*RWRQRR
Trigger: TCGCCGCTGCCGCCAGCGCCAGAGCGGCCAGGAGTT...ACCCCTGGCCAAGCGGCGGAAGCAGAAGCTGCGGAGCGCCACCGCCTCCCGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR GCA 90 bp CGGCGGGAGGCGGTGGCGCTCCGCAGCTTCTGCTTCCGCCGCTTGGCCAGGGGTCGCTTCTTGCGGATGTaGTCCAGCAGCTCCCCGCCC +
Preference number: 2 (lower is better)
Translates to: RREAVALRSFCFRRLARGRFLRM*SSSSPP
Trigger: GGGCGGGGAGCTGCTGGAGCACATCCGCAAGAAGCG...ACCCCTGGCCAAGCGGCGGAAGCAGAAGCTGCGGAGCGCCACCGCCTCCCGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR TCA 90 bp CAGGCGCAGGGCAGCCACTTCGCGCTGCGTGTTCGCCTCCAGCCTGCGACTGAGTCTCGCCCTCCAGGGTaGAGGGCGAGGCCCCCGTCA +
Preference number: 2 (lower is better)
Translates to: QAQGSHFALRVRLQPATESRPPG*RARPPS
Trigger: TGACGGGGGCCTCGCCCTTCACCCTGGAGGGCGAGA...CTCAGTCGCAGGCTGGAGGCGAACACGCAGCGCGAAGTGGCTGCCCTGCGCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR GCA 90 bp GTACTGCAGCGTGAAGCAGGGCGTCTGCATGGGCACCCCGGGACTCTGCGGCCGTGCGTCTTGGCGCGCTaGACCAGCGCCGCCTTGCGC +
Preference number: 2 (lower is better)
Translates to: VLQREAGRLHGHPGTLRPCVLAR*TSAALR
Trigger: GCGCAAGGCGGCGCTGGTGCAGCGCGCCAAGACGCA...CGGCCGCAGAGTCCCGGGGTGCCCATGCAGACGCCCTGCTTCACGCTGCAGTAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR CAA 90 bp CCCTGCCAGGCCTCCCCGTCAAGGGAGAAGCGCCCCTCGCGGATTTaGCACATGATCTCGGCCGCCTGGCTCTGCCCGCCCTGGCCAGAG +
Preference number: 2 (lower is better)
Translates to: PCQASPSREKRPSRI*HMISAAWLCPPWPE
Trigger: CTCTGGCCAGGGCGGGCAGAGCCAGGCGGCCGAGATCATGTGCAAAATCCGCGAGGGGCGCTTCTCCCTTGACGGGGAGGCCTGGCAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR CAA 90 bp TCCTGCAGCCACGAGCTGCCCCGCAGTCCCTCGAGCTTCAGCCGCTaGGCGGGGTCCACGGTCAGGAGCCCTCGGACCAGCTCCTTGGCT +
Preference number: 2 (lower is better)
Translates to: SCSHELPRSPSSFSR*AGSTVRSPRTSSLA
Trigger: AGCCAAGGAGCTGGTCCGAGGGCTCCTGACCGTGGACCCCGCCAAGCGGCTGAAGCTCGAGGGACTGCGGGGCAGCTCGTGGCTGCAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR CAA 90 bp CCCCGGCGGGAGGCGGTGGCGCTCCGCAGCTTCTGCTTCCGCCGCTaGGCCAGGGGTGCATTCTCCACGCTCTTCAGGAAGAAGCCCTCC +
Preference number: 2 (lower is better)
Translates to: PRREAVALRSFCFRR*ARGAFSTLFRKKPS
Trigger: GGAGGGCTTCTTCCTGAAGAGCGTGGAGAATGCACCCCTGGCCAAGCGGCGGAAGCAGAAGCTGCGGAGCGCCACCGCCTCCCGCCGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR TCA 90 bp AGCAGCTCGGGGGCAGCGTACTGCAGCGTGAAGCAGGGCGTCTGCATGGGCACCGGGGCTGCCAGGGGGTaGGTAGACAGGCTCCAGCCG +
Preference number: 2 (lower is better)
Translates to: SSSGAAYCSVKQGVCMGTGAARG*VDRLQP
Trigger: CGGCTGGAGCCTGTCTACTCACCCCCTGGCAGCCCC...GGTGCCCATGCAGACGCCCTGCTTCACGCTGCAGTACGCTGCCCCCGAGCTGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR CCA 90 bp AGGCGCAGGGCAGCCACTTCGCGCTGCGTGTTCGCCTCCAGCCTGCGACTGAGGACCAGGAAGGGCGCCTaGCGCACCAGCTCCAGCACC +
Preference number: 2 (lower is better)
Translates to: RRRAATSRCVFASSLRLRTRKGA*RTSSST
Trigger: GGTGCTGGAGCTGGTGCGCCAGGCGCCCTTCCTGGT...CCTCAGTCGCAGGCTGGAGGCGAACACGCAGCGCGAAGTGGCTGCCCTGCGCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR TCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTAGAGGCCTCCGGGAGTaGGCCGGGCTCCCAGGTCAC +
Preference number: 2 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSRGLRE*AGLPGH
Trigger: GTGACCTGGGAGCCCGGCTCACTCCCGGAGGCCTCT...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
3UTR-3UTR TCA 90 bp CCGCTTGCCCCGGTTGAATGCCATGAAGGTGGCGTTGAGACCCGAGCGCACTGCAGAGGCCTCCGGGAGTaGGCCGGGCTCCCAGGTCAC +
Preference number: 2 (lower is better)
Translates to: PLAPVECHEGGVETRAHCRGLRE*AGLPGH
Trigger: GTGACCTGGGAGCCCGGCTCACTCCCGGAGGCCTCT...GCAGTGCGCTCGGGTCTCAACGCCACCTTCATGGCATTCAACCGGGGCAAGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR TCA 90 bp AGGCGCAGGGCAGCCACTTCGCGCTGCGTGTTCGCCTCCAGCCTGCGACTGAGGTCAGCCCGAAGTCCGTaGGGACAATGTGGCCCTCGG +
Preference number: 2 (lower is better)
Translates to: RRRAATSRCVFASSLRLRSARSP*GQCGPR
Trigger: CCGAGGGCCACATTGTCCTCACGGACTTCGGGCTGA...CCTCAGTCGCAGGCTGGAGGCGAACACGCAGCGCGAAGTGGCTGCCCTGCGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR CCA 90 bp AGGCGCAGGGCAGCCACTTCGCGCTGCGTGTTCGCCTCCAGCCTGCGACTGAGGGGGCCGGAATGGGGCTaGAATCTTCCTGGCAGCCAG +
Preference number: 2 (lower is better)
Translates to: RRRAATSRCVFASSLRLRGPEWG*NLPGSQ
Trigger: CTGGCTGCCAGGAAGATTCCAGCCCCATTCCGGCCC...CCTCAGTCGCAGGCTGGAGGCGAACACGCAGCGCGAAGTGGCTGCCCTGCGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR CCA 90 bp TCCGACTCGCTGAAGTGCCGCTTCTTGCGGATGTGCTCCAGCAGCTCCCCGCCCTGTGCTCTTGCGTCTTaGCGCGCTGCACCAGCGCCG +
Preference number: 2 (lower is better)
Translates to: SDSLKCRFLRMCSSSSPPCALAS*RAAPAP
Trigger: CGGCGCTGGTGCAGCGCGCCAAGACGCAAGAGCACA...GGGCGGGGAGCTGCTGGAGCACATCCGCAAGAAGCGGCACTTCAGCGAGTCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR TCA 90 bp AGGCGCAGGGCAGCCACTTCGCGCTGCGTGTTCGCCTCCAGCCTGCGACTGAGGGCACCTCAGCCTCCTTaGAGTACTGGCGCTGGTAGA +
Preference number: 2 (lower is better)
Translates to: RRRAATSRCVFASSLRLRAPQPP*STGAGR
Trigger: TCTACCAGCGCCAGTACTTCAAGGAGGCTGAGGTGC...CCTCAGTCGCAGGCTGGAGGCGAACACGCAGCGCGAAGTGGCTGCCCTGCGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR GCA 90 bp AGGCGCAGGGCAGCCACTTCGCGCTGCGTGTTCGCCTCCAGCCTGCGACTGAGGATGATGCCGAGCTTGTaGAGGTGTTCCAGGGCCAGC +
Preference number: 2 (lower is better)
Translates to: RRRAATSRCVFASSLRLRMMPSL*RCSRAS
Trigger: GCTGGCCCTGGAACACCTGCACAAGCTCGGCATCAT...CCTCAGTCGCAGGCTGGAGGCGAACACGCAGCGCGAAGTGGCTGCCCTGCGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR GCA 90 bp ACGAGGCTGCGCAGGATCTGGCTTGCTTCCGACTCGCTGAAGTGCCGCTTCTTGCGCTGCAGCAGGTCCTaGGCCACGGGCCCGATCCGA +
Preference number: 2 (lower is better)
Translates to: TRLRRIWLASDSLKCRFLRCSRS*ATGPIR
Trigger: TCGGATCGGGCCCGTGGCGCAGGACCTGCTGCAGCG...CAAGAAGCGGCACTTCAGCGAGTCGGAAGCAAGCCAGATCCTGCGCAGCCTCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR CCA 90 bp CCGCTTGCCCCGGTTGAATGCCATGAAGGTGGCGTTGAGACCCGAGCGCACTGCTTGACTGCGAACTCCTaGCCGCTCTGGCGCTGGCGG +
Preference number: 2 (lower is better)
Translates to: PLAPVECHEGGVETRAHCLTANS*PLWRWR
Trigger: CCGCCAGCGCCAGAGCGGCCAGGAGTTCGCAGTCAA...GCAGTGCGCTCGGGTCTCAACGCCACCTTCATGGCATTCAACCGGGGCAAGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR GCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGGCAGTGACCATGGATaGCCAGCCCAGACCCCCAAG +
Preference number: 2 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSGSDHG*PAQTPK
Trigger: CTTGGGGGTCTGGGCTGGGCATCCATGGTCACTGCC...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
3UTR-3UTR GCA 90 bp GGGCTGGAATCTTCCTGGCAGCCAGAGCCACCCAATCGAGGCCCTGGAAGAAGGGTGCGCGTGTGCTCTTaGGTCTTGGCGCGCTGCACC +
Preference number: 2 (lower is better)
Translates to: GLESSWQPEPPNRGPGRRVRVCS*VLARCT
Trigger: GGTGCAGCGCGCCAAGACGCAAGAGCACACGCGCAC...CCTTCTTCCAGGGCCTCGATTGGGTGGCTCTGGCTGCCAGGAAGATTCCAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR GCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTCGAGACACCTCAGCCTaGGTGTTCCTCTCGCCCTCC +
Preference number: 2 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSRDTSA*VFLSPS
Trigger: GGAGGGCGAGAGGAACACGCAGGCTGAGGTGTCTCG...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR GCA 90 bp AGCAGCTCGGGGGCAGCGTACTGCAGCGTGAAGCAGGGCGTCTGCATGGGCACCTCCGACTCGCTGAAGTaGCGCTTCTTGCGGATGTGC +
Preference number: 2 (lower is better)
Translates to: SSSGAAYCSVKQGVCMGTSDSLK*RFLRMC
Trigger: GCACATCCGCAAGAAGCGGCACTTCAGCGAGTCGGA...GGTGCCCATGCAGACGCCCTGCTTCACGCTGCAGTACGCTGCCCCCGAGCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR CCA 90 bp ACGAGGCTGCGCAGGATCTGGCTTGCTTCCGACTCGCTGAAGTGCCGCTTCTTGACTTCTTGTGCCCCCTaGGGCCCCGCGCCCAATCGC +
Preference number: 2 (lower is better)
Translates to: TRLRRIWLASDSLKCRFLTSCAP*GPAPNR
Trigger: GCGATTGGGCGCGGGGCCCCAGGGGGCACAAGAAGT...CAAGAAGCGGCACTTCAGCGAGTCGGAAGCAAGCCAGATCCTGCGCAGCCTCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR CCA 90 bp GACACGAGGCTGCGCAGGATCTGGCTTGCTTCCGACTCGCTGAAGTGCCGCTTCACGTTGGGGTGTGACTaGCACAGGCGCAGGGCAGCC +
Preference number: 2 (lower is better)
Translates to: DTRLRRIWLASDSLKCRFTLGCD*HRRRAA
Trigger: GGCTGCCCTGCGCCTGTGCCAGTCACACCCCAACGT...GAAGCGGCACTTCAGCGAGTCGGAAGCAAGCCAGATCCTGCGCAGCCTCGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR TCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGAGAGGCCTCCGGGAGTaGGCCGGGCTCCCAGGTCAC +
Preference number: 2 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQRGLRE*AGLPGH
Trigger: GTGACCTGGGAGCCCGGCTCACTCCCGGAGGCCTCT...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
3UTR-3UTR TCA 90 bp ACGAGGCTGCGCAGGATCTGGCTTGCTTCCGACTCGCTGAAGTGCCGCTTCTTGAAGCGTAGTGCAGCGTaGCCAGGAAGGGCGCCTGGC +
Preference number: 2 (lower is better)
Translates to: TRLRRIWLASDSLKCRFLKRSAA*PGRAPG
Trigger: GCCAGGCGCCCTTCCTGGTCACGCTGCACTACGCTT...CAAGAAGCGGCACTTCAGCGAGTCGGAAGCAAGCCAGATCCTGCGCAGCCTCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR GCA 90 bp ACGAGGCTGCGCAGGATCTGGCTTGCTTCCGACTCGCTGAAGTGCCGCTTCTTGGCAGCCACTTCGCGCTaGGTGTTCGCCTCCAGCCTG +
Preference number: 2 (lower is better)
Translates to: TRLRRIWLASDSLKCRFLAATSR*VFASSL
Trigger: CAGGCTGGAGGCGAACACGCAGCGCGAAGTGGCTGC...CAAGAAGCGGCACTTCAGCGAGTCGGAAGCAAGCCAGATCCTGCGCAGCCTCGT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR CCA 90 bp CCCGCAGCAGCTCCAGGACCAGGTACGTGTGCAGCTGGTCGTGATGCACCTCGTAGCTCTGAGCGGATTTaGGGCCGGAATGGGGCTGGA +
Preference number: 2 (lower is better)
Translates to: PAAAPGPGTCAAGRDAPRSSERI*GRNGAG
Trigger: TCCAGCCCCATTCCGGCCCCAAATCCGCTCAGAGCT...ACGAGGTGCATCACGACCAGCTGCACACGTACCTGGTCCTGGAGCTGCTGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR TCA 90 bp CAGGGCCAGCACGATCTCACCCCCATACACGCGCACCTCAGCCTCCTTGAAGTAGCTGGTAGAGGTGGGTaGACATCTCCCCGCCGCTCA +
Preference number: 2 (lower is better)
Translates to: QGQHDLTPIHAHLSLLEVAGRGG*TSPRRS
Trigger: TGAGCGGCGGGGAGATGTTCACCCACCTCTACCAGC...TACTTCAAGGAGGCTGAGGTGCGCGTGTATGGGGGTGAGATCGTGCTGGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR GCA 90 bp GACACGAGGCTGCGCAGGATCTGGCTTGCTTCCGACTCGCTGAAGTGCCGCTTCGACACACAGAAAAGCTaGCCTGGCCCAGCGCAGGCT +
Preference number: 2 (lower is better)
Translates to: DTRLRRIWLASDSLKCRFDTQKS*PGPAQA
Trigger: AGCCTGCGCTGGGCCAGGGCAGCTTTTCTGTGTGTC...GAAGCGGCACTTCAGCGAGTCGGAAGCAAGCCAGATCCTGCGCAGCCTCGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR TCA 90 bp GGATACACCCTGCCAGGCCTCCCCGTCAAGGGAGAAGCGCCCCTCGCGGATTTTTCACATAGTCCAGGATaGGGTGCAGCTTGGCATCCG +
Preference number: 2 (lower is better)
Translates to: GYTLPGLPVKGEAPLADFSHSPG*GAAWHP
Trigger: CGGATGCCAAGCTGCACCTCATCCTGGACTATGTGA...AAAATCCGCGAGGGGCGCTTCTCCCTTGACGGGGAGGCCTGGCAGGGTGTATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR GCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGGTGACAGTTGAGGGGTaGCCCTCCCAGGAACGGGGC +
Preference number: 2 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQVTVEG*PSQERG
Trigger: GCCCCGTTCCTGGGAGGGGCACCCCTCAACTGTCAC...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
3UTR-3UTR GCA 90 bp CGAGTGAATTCCTCCGCAAAGTTGCCCACATCCAGCTCTGAGCGGATTTGGGGCGCACCGAGCGCTCGGTaGGCGTGTGCTCTTGCGTCT +
Preference number: 2 (lower is better)
Translates to: RVNSSAKLPTSSSERIWGAPSAR*ACALAS
Trigger: AGACGCAAGAGCACACGCGCACCGAGCGCTCGGTGC...GCCCCAAATCCGCTCAGAGCTGGATGTGGGCAACTTTGCGGAGGAATTCACTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR CCA 90 bp CTCCCGCAGGTCCAGCTCGTACTGCTGGAAGAAGGGCGAGTCCTGCATCATAGCTCCGTGAGGACAATGTaGCCCTCGGAGTCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: LPQVQLVLLEEGRVLHHSSVRTM*PSESSS
Trigger: GCTGCTGGACTCCGAGGGCCACATTGTCCTCACGGA...GCTATGATGCAGGACTCGCCCTTCTTCCAGCAGTACGAGCTGGACCTGCGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR TCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTAGACAGTCCATAAAGTaGCAGTTGAGGGGTGCCCCT +
Preference number: 2 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSRQSIK*QLRGAP
Trigger: AGGGGCACCCCTCAACTGTCACTTTATGGACTGTCT...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
3UTR-3UTR TCA 90 bp GGGCTGGAATCTTCCTGGCAGCCAGAGCCACCCAATCGAGGCCCTGGAAGAAGGCCGTCTTGCTACGGATaGTTTCGGGGGCCATGTACT +
Preference number: 2 (lower is better)
Translates to: GLESSWQPEPPNRGPGRRPSCYG*FRGPCT
Trigger: AGTACATGGCCCCCGAAATCATCCGTAGCAAGACGG...CCTTCTTCCAGGGCCTCGATTGGGTGGCTCTGGCTGCCAGGAAGATTCCAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR GCA 90 bp CTCCCGCAGGTCCAGCTCGTACTGCTGGAAGAAGGGCGAGTCCTGCATCATAGCACCAGTCCACAGCCTTaGCATGCCCCGTCTTGCTAC +
Preference number: 2 (lower is better)
Translates to: LPQVQLVLLEEGRVLHHSTSPQP*HAPSCY
Trigger: GTAGCAAGACGGGGCATGGCAAGGCTGTGGACTGGT...GCTATGATGCAGGACTCGCCCTTCTTCCAGCAGTACGAGCTGGACCTGCGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR CCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGTTGGAGCAGTCCCCCTaGAGGGGCCTTCTGCCCAGA +
Preference number: 2 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQLEQSP*RGLLPR
Trigger: TCTGGGCAGAAGGCCCCTCCAGGGGGACTGCTCCAA...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
3UTR-3UTR CCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGGGGGCTCTTTCCTGTTaGAGCAGTCCCCCTGGAGGG +
Preference number: 2 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQGALSC*SSPPGG
Trigger: CCCTCCAGGGGGACTGCTCCAACAGGAAAGAGCCCC...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
3UTR-3UTR CCA 90 bp CTCCCGCAGGTCCAGCTCGTACTGCTGGAAGAAGGGCGAGTCCTGCATCATAGCGATTTGGGGCCGGAATaGGGCTGGAATCTTCCTGGC +
Preference number: 2 (lower is better)
Translates to: LPQVQLVLLEEGRVLHHSDLGPE*GWNLPG
Trigger: GCCAGGAAGATTCCAGCCCCATTCCGGCCCCAAATC...GCTATGATGCAGGACTCGCCCTTCTTCCAGCAGTACGAGCTGGACCTGCGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR CAA 90 bp CGGTCTCCAGCACCAGGCGCTTCCAGCCCATCGGTCATCACCGCGTaGTTGTGGTCAAAGAGAATGGAGGGTGCCACAAAGGAGTATCCC +
Preference number: 2 (lower is better)
Translates to: RSPAPGASSPSVITA*LWSKRMEGATKEYP
Trigger: GGGATACTCCTTTGTGGCACCCTCCATTCTCTTTGACCACAACAACGCGGTGATGACCGATGGGCTGGAAGCGCCTGGTGCTGGAGACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR GCA 90 bp CATCACCGCGTTGTTGTGGTCAAAGAGAATGGAGGGTGCCACAAAGGAGTATCCCGCTCGGTGCGCGTGTaGTCTTGCGTCTTGGCGCGC +
Preference number: 2 (lower is better)
Translates to: HHRVVVVKENGGCHKGVSRSVRV*SCVLAR
Trigger: GCGCGCCAAGACGCAAGAGCACACGCGCACCGAGCG...GGATACTCCTTTGTGGCACCCTCCATTCTCTTTGACCACAACAACGCGGTGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR CCA 90 bp CTCCCGCAGGTCCAGCTCGTACTGCTGGAAGAAGGGCGAGTCCTGCATCATAGCCCCTGGAAGAAGGGATaGTTCCGGACTTCTTGTGCC +
Preference number: 2 (lower is better)
Translates to: LPQVQLVLLEEGRVLHHSPWKKG*FRTSCA
Trigger: GGCACAAGAAGTCCGGAACCATCCCTTCTTCCAGGG...GCTATGATGCAGGACTCGCCCTTCTTCCAGCAGTACGAGCTGGACCTGCGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR GCA 90 bp CGAGTGAATTCCTCCGCAAAGTTGCCCACATCCAGCTCTGAGCGGATTTGGGGCTCCACAGCCTTGCCATaGCCCGTCTTGCTACGGATG +
Preference number: 2 (lower is better)
Translates to: RVNSSAKLPTSSSERIWGSTALP*PVLLRM
Trigger: CATCCGTAGCAAGACGGGGCATGGCAAGGCTGTGGA...GCCCCAAATCCGCTCAGAGCTGGATGTGGGCAACTTTGCGGAGGAATTCACTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR CCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGGAAAGGACAGTCCCTTaGGGATCAGGTCAGCCGCAG +
Preference number: 2 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQERTVP*GSGQPQ
Trigger: CTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
3UTR-3UTR CCA 90 bp GTAGACAGGCTCCAGCCGAGTGAATTCCTCCGCAAAGTTGCCCACATCCAGCTCTACTTCTGCTCTGTCTaGGAGTGGGGTGGGGTAGGA +
Preference number: 2 (lower is better)
Translates to: VDRLQPSEFLRKVAHIQLYFCSV*EWGGVG
Trigger: TCCTACCCCACCCCACTCCCAGACAGAGCAGAAGTA...GAGCTGGATGTGGGCAACTTTGCGGAGGAATTCACTCGGCTGGAGCCTGTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR CAA 90 bp GAGGGTCCCCCAGGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTaGGTGGACGTAATTGCACAGACAGTCCATAAAGTGACAGTTGAG +
Preference number: 2 (lower is better)
Translates to: EGPPGPLLQYPQHGS*VDVIAQTVHKVTVE
Trigger: CTCAACTGTCACTTTATGGACTGTCTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCCTGGGGGACCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
3UTR-3UTR CCA 90 bp CATCACCGCGTTGTTGTGGTCAAAGAGAATGGAGGGTGCCACAAAGGAGTATCCGAAAGGACAGTCCCTTaGGGATCAGGTCAGCCGCAG +
Preference number: 2 (lower is better)
Translates to: HHRVVVVKENGGCHKGVSERTVP*GSGQPQ
Trigger: CTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC...GGATACTCCTTTGTGGCACCCTCCATTCTCTTTGACCACAACAACGCGGTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR CCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTTGCCACACACAGCACTaGGTGGACTTTTATTTTAAA +
Preference number: 2 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSCHTQH*VDFYFK
Trigger: TTTAAAATAAAAGTCCACCCAGTGCTGTGTGTGGCA...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
3UTR-3UTR CCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTACACACAGCACTGGGTaGACTTTTATTTTAAAGTCA +
Preference number: 2 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSTHSTG*TFILKS
Trigger: TGACTTTAAAATAAAAGTCCACCCAGTGCTGTGTGT...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
3UTR-3UTR CCA 90 bp AACAGGGTAGGGGGTCCCAGTTTAGGAGTTAGCACTCCTAACTCAGTGCTTAGATACTTCTGCTCTGTCTaGGAGTGGGGTGGGGTAGGA +
Preference number: 2 (lower is better)
Translates to: NRVGGPSLGVSTPNSVLRYFCSV*EWGGVG
Trigger: TCCTACCCCACCCCACTCCCAGACAGAGCAGAAGTA...TCTAAGCACTGAGTTAGGAGTGCTAACTCCTAAACTGGGACCCCCTACCCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
3UTR GCA 72 bp CGCACCAGCTCCAGCACCGAGCGCTCGGTGCGCGTGTaGTCTTGCGTCTTGGCGCGCTGCACCAGCGCCGCC +
Preference number: 3 (lower is better)
Translates to: RTSSSTERSVRV*SCVLARCTSAA
Trigger: GGCGGCGCTGGTGCAGCGCGCCAAGACGCAAGAGCACACGCGCACCGAGCGCTCGGTGCTGGAGCTGGTGCG
74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR GCA 72 bp GAGCCCCGGCGGGAGGCGGTGGCGCTCCGCAGCTTCTaGTTCCGCCGCTTGGCCAGGGGTGCATTCTCCACG +
Preference number: 3 (lower is better)
Translates to: EPRREAVALRSF*FRRLARGAFST
Trigger: CGTGGAGAATGCACCCCTGGCCAAGCGGCGGAAGCAGAAGCTGCGGAGCGCCACCGCCTCCCGCCGGGGCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR GCA 72 bp AGCTCCAGCACCGAGCGCTCGGTGCGCGTGTGCTCTTaGGTCTTGGCGCGCTGCACCAGCGCCGCCTTGCGC +
Preference number: 3 (lower is better)
Translates to: SSSTERSVRVCS*VLARCTSAALR
Trigger: GCGCAAGGCGGCGCTGGTGCAGCGCGCCAAGACGCAAGAGCACACGCGCACCGAGCGCTCGGTGCTGGAGCT
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR GCA 72 bp GCGCCTGGCGCACCAGCTCCAGCACCGAGCGCTCGGTaGGCGTGTGCTCTTGCGTCTTGGCGCGCTGCACCA +
Preference number: 3 (lower is better)
Translates to: APGAPAPAPSAR*ACALASWRAAP
Trigger: TGGTGCAGCGCGCCAAGACGCAAGAGCACACGCGCACCGAGCGCTCGGTGCTGGAGCTGGTGCGCCAGGCGC
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR GCA 72 bp TCGGGGGCAGCGTACTGCAGCGTGAAGCAGGGCGTCTaGATGGGCACCCCGGGACTCTGCGGCCGCAACCGC +
Preference number: 3 (lower is better)
Translates to: SGAAYCSVKQGV*MGTPGLCGRNR
Trigger: GCGGTTGCGGCCGCAGAGTCCCGGGGTGCCCATGCAGACGCCCTGCTTCACGCTGCAGTACGCTGCCCCCGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR CCA 72 bp GCACCGAGCGCTCGGTGCGCGTGTGCTCTTGCGTCTTaGCGCGCTGCACCAGCGCCGCCTTGCGCAGCACCT +
Preference number: 3 (lower is better)
Translates to: APSARCACALAS*RAAPAPPCAAP
Trigger: AGGTGCTGCGCAAGGCGGCGCTGGTGCAGCGCGCCAAGACGCAAGAGCACACGCGCACCGAGCGCTCGGTGC
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR TCA 72 bp GCTGCGCCAGCAGCTCGGGGGCAGCGTACTGCAGCGTaGAGCAGGGCGTCTGCATGGGCACCCCGGGACTCT +
Preference number: 3 (lower is better)
Translates to: AAPAARGQRTAA*SRASAWAPRDS
Trigger: AGAGTCCCGGGGTGCCCATGCAGACGCCCTGCTTCACGCTGCAGTACGCTGCCCCCGAGCTGCTGGCGCAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR GCA 72 bp GGGCGAGTCCTGCATCATAGCGCTCCTGGCCACCGCTaGCCGACCTGGCCGGTCTCCAGCACCAGGCGCTTC +
Preference number: 3 (lower is better)
Translates to: GRVLHHSAPGHR*PTWPVSSTRRF
Trigger: GAAGCGCCTGGTGCTGGAGACCGGCCAGGTCGGGCAGCGGTGGCCAGGAGCGCTATGATGCAGGACTCGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR GCA 72 bp GGCTTGAGGTCGCGGTGCACCACGCCCGCCTCCTCGTaGATGAAGCTCACGGCCGACACGAGGCTGCGCAGG +
Preference number: 3 (lower is better)
Translates to: GLRSRCTTPASS*MKLTADTRLRR
Trigger: CCTGCGCAGCCTCGTGTCGGCCGTGAGCTTCATGCACGAGGAGGCGGGCGTGGTGCACCGCGACCTCAAGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR CCA 72 bp CGCTGGCGGCAGCGGCGACACACAGAAAAGCTGCCCTaGCCCAGCGCAGGCTCCCGCAGGTCCAGCTCGTAC +
Preference number: 3 (lower is better)
Translates to: RWRQRRHTEKLP*PSAGSRRSSSY
Trigger: GTACGAGCTGGACCTGCGGGAGCCTGCGCTGGGCCAGGGCAGCTTTTCTGTGTGTCGCCGCTGCCGCCAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR CCA 72 bp ACGAGCTGCCCCGCAGTCCCTCGAGCTTCAGCCGCTTaGCGGGGTCCACGGTCAGGAGCCCTCGGACCAGCT +
Preference number: 3 (lower is better)
Translates to: TSCPAVPRASAA*RGPRSGALGPA
Trigger: AGCTGGTCCGAGGGCTCCTGACCGTGGACCCCGCCAAGCGGCTGAAGCTCGAGGGACTGCGGGGCAGCTCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR CAA 90 bp CAGGCGCAGGGCAGCCACTTCGCGCTGCGTGTTCGCCTCCAGCCTGCGACTGAGGGTGCGCGTGTGCTCTaGCGTCTTGGCGCGCTGCAC +
Preference number: 3 (lower is better)
Translates to: QAQGSHFALRVRLQPATEGARVL*RLGALH
Trigger: GTGCAGCGCGCCAAGACGCAAGAGCACACGCGCACC...CTCAGTCGCAGGCTGGAGGCGAACACGCAGCGCGAAGTGGCTGCCCTGCGCCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR CCA 72 bp CTGCATCATAGCGCTCCTGGCCACCGCTGCCCGACCTaGCCGGTCTCCAGCACCAGGCGCTTCCAGCCCATC +
Preference number: 3 (lower is better)
Translates to: LHHSAPGHRCPT*PVSSTRRFQPI
Trigger: GATGGGCTGGAAGCGCCTGGTGCTGGAGACCGGCCAGGTCGGGCAGCGGTGGCCAGGAGCGCTATGATGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR TCA 72 bp CGTCAAGGGAGAAGCGCCCCTCGCGGATTTTGCACATaGTCTCGGCCGCCTGGCTCTGCCCGCCCTGGCCAG +
Preference number: 3 (lower is better)
Translates to: RQGRSAPRGFCT*SRPPGSARPGQ
Trigger: CTGGCCAGGGCGGGCAGAGCCAGGCGGCCGAGATCATGTGCAAAATCCGCGAGGGGCGCTTCTCCCTTGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR GCA 72 bp CGTGTTCGCCTCCAGCCTGCGACTGAGGATCTTGACTaGGAACTCCTGGCCGCTCTGGCGCTGGCGGCAGCG +
Preference number: 3 (lower is better)
Translates to: RVRLQPATEDLD*ELLAALALAAA
Trigger: CGCTGCCGCCAGCGCCAGAGCGGCCAGGAGTTCGCAGTCAAGATCCTCAGTCGCAGGCTGGAGGCGAACACG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR GCA 72 bp GAATGCCATGAAGGTGGCGTTGAGACCCGAGCGCACTaGGGGCCCAGAGGACTCGAGCACGTCGGGCGTCCG +
Preference number: 3 (lower is better)
Translates to: ECHEGGVETRAH*GPRGLEHVGRP
Trigger: CGGACGCCCGACGTGCTCGAGTCCTCTGGGCCCGCAGTGCGCTCGGGTCTCAACGCCACCTTCATGGCATTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR CAA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGTGCTCTTGCGTCTaGGCGCGCTGCACCAGCGCC +
Preference number: 3 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGVCSCV*ARCTSA
Trigger: GGCGCTGGTGCAGCGCGCCAAGACGCAAGAGCACAC...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR GCA 72 bp GTGAAGCAGGGCGTCTGCATGGGCACCCCGGGACTCTaGGGCCGCAACCGCGCGAACCCGAAGTCGATGATT +
Preference number: 3 (lower is better)
Translates to: VKQGVCMGTPGL*GRNRANPKSMI
Trigger: AATCATCGACTTCGGGTTCGCGCGGTTGCGGCCGCAGAGTCCCGGGGTGCCCATGCAGACGCCCTGCTTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR CAA 90 bp GTACTGCAGCGTGAAGCAGGGCGTCTGCATGGGCACCCCGGGACTCTGCGGCCGAGGATGAGGTGCAGCTaGGCATCCGTCTGGAAAGCG +
Preference number: 3 (lower is better)
Translates to: VLQREAGRLHGHPGTLRPRMRCS*ASVWKA
Trigger: CGCTTTCCAGACGGATGCCAAGCTGCACCTCATCCT...CGGCCGCAGAGTCCCGGGGTGCCCATGCAGACGCCCTGCTTCACGCTGCAGTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR TCA 72 bp GCAGCTTGGCATCCGTCTGGAAAGCGTAGTGCAGCGTaGCCAGGAAGGGCGCCTGGCGCACCAGCTCCAGCA +
Preference number: 3 (lower is better)
Translates to: AAWHPSGKRSAA*PGRAPGAPAPA
Trigger: TGCTGGAGCTGGTGCGCCAGGCGCCCTTCCTGGTCACGCTGCACTACGCTTTCCAGACGGATGCCAAGCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR GCA 72 bp GGGGAGCACTTCAGGATCCGTCGAGACACCTCAGCCTaGGTGTTCCTCTCGCCCTCCAGGGTGAAGGGCGAG +
Preference number: 3 (lower is better)
Translates to: GEHFRIRRDTSA*VFLSPSRVKGE
Trigger: CTCGCCCTTCACCCTGGAGGGCGAGAGGAACACGCAGGCTGAGGTGTCTCGACGGATCCTGAAGTGCTCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR GCA 72 bp TGTGACTGGCACAGGCGCAGGGCAGCCACTTCGCGCTaGGTGTTCGCCTCCAGCCTGCGACTGAGGATCTTG +
Preference number: 3 (lower is better)
Translates to: CDWHRRRAATSR*VFASSLRLRIL
Trigger: CAAGATCCTCAGTCGCAGGCTGGAGGCGAACACGCAGCGCGAAGTGGCTGCCCTGCGCCTGTGCCAGTCACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR CCA 72 bp CCCAGCGCAGGCTCCCGCAGGTCCAGCTCGTACTGCTaGAAGAAGGGCGAGTCCTGCATCATAGCGCTCCTG +
Preference number: 3 (lower is better)
Translates to: PSAGSRRSSSYC*KKGESCIIALL
Trigger: CAGGAGCGCTATGATGCAGGACTCGCCCTTCTTCCAGCAGTACGAGCTGGACCTGCGGGAGCCTGCGCTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR CCA 72 bp AGGATCTTGACTGCGAACTCCTGGCCGCTCTGGCGCTaGCGGCAGCGGCGACACACAGAAAAGCTGCCCTGG +
Preference number: 3 (lower is better)
Translates to: RILTANSWPLWR*RQRRHTEKLPW
Trigger: CCAGGGCAGCTTTTCTGTGTGTCGCCGCTGCCGCCAGCGCCAGAGCGGCCAGGAGTTCGCAGTCAAGATCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR CCA 72 bp TGCACCTCGTGCAGATTCACCACGTTGGGGTGTGACTaGCACAGGCGCAGGGCAGCCACTTCGCGCTGCGTG +
Preference number: 3 (lower is better)
Translates to: CTSCRFTTLGCD*HRRRAATSRCV
Trigger: CACGCAGCGCGAAGTGGCTGCCCTGCGCCTGTGCCAGTCACACCCCAACGTGGTGAATCTGCACGAGGTGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR CCA 72 bp AGGCGGTGGCGCTCCGCAGCTTCTGCTTCCGCCGCTTaGCCAGGGGTGCATTCTCCACGCTCTTCAGGAAGA +
Preference number: 3 (lower is better)
Translates to: RRWRSAASASAA*PGVHSPRSSGR
Trigger: TCTTCCTGAAGAGCGTGGAGAATGCACCCCTGGCCAAGCGGCGGAAGCAGAAGCTGCGGAGCGCCACCGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR CAA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTAGGGGCTCTTTCCTGTaGGAGCAGTCCCCCTGGAGG +
Preference number: 3 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSRGSFL*EQSPWR
Trigger: CCTCCAGGGGGACTGCTCCAACAGGAAAGAGCCCCT...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
3UTR-3UTR CAA 90 bp TCCGACTCGCTGAAGTGCCGCTTCTTGCGGATGTGCTCCAGCAGCTCCCCGCCCCTGCGACTGAGGATCTaGACTGCGAACTCCTGGCCG +
Preference number: 3 (lower is better)
Translates to: SDSLKCRFLRMCSSSSPPLRLRI*TANSWP
Trigger: CGGCCAGGAGTTCGCAGTCAAGATCCTCAGTCGCAG...GGGCGGGGAGCTGCTGGAGCACATCCGCAAGAAGCGGCACTTCAGCGAGTCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR TCA 72 bp GTGATGCACCTCGTGCAGATTCACCACGTTGGGGTGTaGCTGGCACAGGCGCAGGGCAGCCACTTCGCGCTG +
Preference number: 3 (lower is better)
Translates to: VMHLVQIHHVGV*LAQAQGSHFAL
Trigger: CAGCGCGAAGTGGCTGCCCTGCGCCTGTGCCAGTCACACCCCAACGTGGTGAATCTGCACGAGGTGCATCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR GCA 72 bp CCCAATCGCTTCTTAGGATCCTTACAAAGCAGCCGCTaGAGCAGGTCCTGCGCCACGGGCCCGATCCGAGGG +
Preference number: 3 (lower is better)
Translates to: PNRFLGSLQSSR*SRSCATGPIRG
Trigger: CCCTCGGATCGGGCCCGTGGCGCAGGACCTGCTGCAGCGGCTGCTTTGTAAGGATCCTAAGAAGCGATTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR GCA 72 bp CTGCGCAGGATCTGGCTTGCTTCCGACTCGCTGAAGTaGCGCTTCTTGCGGATGTGCTCCAGCAGCTCCCCG +
Preference number: 3 (lower is better)
Translates to: LRRIWLASDSLK*RFLRMCSSSSP
Trigger: CGGGGAGCTGCTGGAGCACATCCGCAAGAAGCGGCACTTCAGCGAGTCGGAAGCAAGCCAGATCCTGCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR GCA 72 bp GCTCACGGCCGACACGAGGCTGCGCAGGATCTGGCTTaGTTCCGACTCGCTGAAGTGCCGCTTCTTGCGGAT +
Preference number: 3 (lower is better)
Translates to: AHGRHEAAQDLA*FRLAEVPLLAD
Trigger: ATCCGCAAGAAGCGGCACTTCAGCGAGTCGGAAGCAAGCCAGATCCTGCGCAGCCTCGTGTCGGCCGTGAGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR CCA 72 bp CGACTGAGGATCTTGACTGCGAACTCCTGGCCGCTCTaGCGCTGGCGGCAGCGGCGACACACAGAAAAGCTG +
Preference number: 3 (lower is better)
Translates to: RLRILTANSWPL*RWRQRRHTEKL
Trigger: CAGCTTTTCTGTGTGTCGCCGCTGCCGCCAGCGCCAGAGCGGCCAGGAGTTCGCAGTCAAGATCCTCAGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR CAA 90 bp CCCGCAGCAGCTCCAGGACCAGGTACGTGTGCAGCTGGTCGTGATGCACCTCGTTCCGTCAGGAACTCCTaGCTCAGCCCGAAGTCCGTG +
Preference number: 3 (lower is better)
Translates to: PAAAPGPGTCAAGRDAPRSVRNS*LSPKSV
Trigger: CACGGACTTCGGGCTGAGCAAGGAGTTCCTGACGGA...ACGAGGTGCATCACGACCAGCTGCACACGTACCTGGTCCTGGAGCTGCTGCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR CAA 90 bp CCCGCAGCAGCTCCAGGACCAGGTACGTGTGCAGCTGGTCGTGATGCACCTCGTTTGCCATGCCCCGTCTaGCTACGGATGATTTCGGGG +
Preference number: 3 (lower is better)
Translates to: PAAAPGPGTCAAGRDAPRLPCPV*LRMISG
Trigger: CCCCGAAATCATCCGTAGCAAGACGGGGCATGGCAA...ACGAGGTGCATCACGACCAGCTGCACACGTACCTGGTCCTGGAGCTGCTGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR CAA 90 bp GTACTGCAGCGTGAAGCAGGGCGTCTGCATGGGCACCCCGGGACTCTGCGGCCGTCGGTCATCACCGCGTaGTTGTGGTCAAAGAGAATG +
Preference number: 3 (lower is better)
Translates to: VLQREAGRLHGHPGTLRPSVITA*LWSKRM
Trigger: CATTCTCTTTGACCACAACAACGCGGTGATGACCGA...CGGCCGCAGAGTCCCGGGGTGCCCATGCAGACGCCCTGCTTCACGCTGCAGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR TCA 72 bp CGAGGCTGCGCAGGATCTGGCTTGCTTCCGACTCGCTaGAGTGCCGCTTCTTGCGGATGTGCTCCAGCAGCT +
Preference number: 3 (lower is better)
Translates to: RGCAGSGLLPTR*SAASCGCAPAA
Trigger: AGCTGCTGGAGCACATCCGCAAGAAGCGGCACTTCAGCGAGTCGGAAGCAAGCCAGATCCTGCGCAGCCTCG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR CCA 72 bp AGCGGATTTGGGGCCGGAATGGGGCTGGAATCTTCCTaGCAGCCAGAGCCACCCAATCGAGGCCCTGGAAGA +
Preference number: 3 (lower is better)
Translates to: SGFGAGMGLESS*QPEPPNRGPGR
Trigger: TCTTCCAGGGCCTCGATTGGGTGGCTCTGGCTGCCAGGAAGATTCCAGCCCCATTCCGGCCCCAAATCCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR CCA 72 bp GCTGGTCGTGATGCACCTCGTGCAGATTCACCACGTTaGGGTGTGACTGGCACAGGCGCAGGGCAGCCACTT +
Preference number: 3 (lower is better)
Translates to: AGRDAPRADSPR*GVTGTGAGQPL
Trigger: AAGTGGCTGCCCTGCGCCTGTGCCAGTCACACCCCAACGTGGTGAATCTGCACGAGGTGCATCACGACCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR CAA 90 bp AGCAGCTCGGGGGCAGCGTACTGCAGCGTGAAGCAGGGCGTCTGCATGGGCACCGTCATCACCGCGTTGTaGTGGTCAAAGAGAATGGAG +
Preference number: 3 (lower is better)
Translates to: SSSGAAYCSVKQGVCMGTVITAL*WSKRME
Trigger: CTCCATTCTCTTTGACCACAACAACGCGGTGATGAC...GGTGCCCATGCAGACGCCCTGCTTCACGCTGCAGTACGCTGCCCCCGAGCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR CCA 72 bp TCCGCAAAGTTGCCCACATCCAGCTCTGAGCGGATTTaGGGCCGGAATGGGGCTGGAATCTTCCTGGCAGCC +
Preference number: 3 (lower is better)
Translates to: SAKLPTSSSERI*GRNGAGIFLAA
Trigger: GGCTGCCAGGAAGATTCCAGCCCCATTCCGGCCCCAAATCCGCTCAGAGCTGGATGTGGGCAACTTTGCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR CCA 72 bp ATGAAGCTCACGGCCGACACGAGGCTGCGCAGGATCTaGCTTGCTTCCGACTCGCTGAAGTGCCGCTTCTTG +
Preference number: 3 (lower is better)
Translates to: MKLTADTRLRRI*LASDSLKCRFL
Trigger: CAAGAAGCGGCACTTCAGCGAGTCGGAAGCAAGCCAGATCCTGCGCAGCCTCGTGTCGGCCGTGAGCTTCAT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR CAA 90 bp CAAAGTTGCCCACATCCAGCTCTGAGCGGATTTGGGGCCGGAATGGGGCTGGAACACCAGTCCACAGCCTaGCCATGCCCCGTCTTGCTA +
Preference number: 3 (lower is better)
Translates to: QSCPHPALSGFGAGMGLEHQSTA*PCPVLL
Trigger: TAGCAAGACGGGGCATGGCAAGGCTGTGGACTGGTG...TTCCAGCCCCATTCCGGCCCCAAATCCGCTCAGAGCTGGATGTGGGCAACTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR CCA 72 bp TGGAAGAAGGGATGGTTCCGGACTTCTTGTGCCCCCTaGGGCCCCGCGCCCAATCGCTTCTTAGGATCCTTA +
Preference number: 3 (lower is better)
Translates to: WKKGWFRTSCAP*GPAPNRFLGSL
Trigger: TAAGGATCCTAAGAAGCGATTGGGCGCGGGGCCCCAGGGGGCACAAGAAGTCCGGAACCATCCCTTCTTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR CAA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGGGAAAGGACAGTCCCTaGGGGATCAGGTCAGCCGCA +
Preference number: 3 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQGKDSP*GIRSAA
Trigger: TGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCC...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
3UTR-3UTR CAA 90 bp GTCAAAGAGAATGGAGGGTGCCACAAAGGAGTATCCCTGAAAGATTCGGGGGTCGGAAAGGACAGTCCCTaGGGGATCAGGTCAGCCGCA +
Preference number: 3 (lower is better)
Translates to: VKENGGCHKGVSLKDSGVGKDSP*GIRSAA
Trigger: TGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCC...GACCCCCGAATCTTTCAGGGATACTCCTTTGTGGCACCCTCCATTCTCTTTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR TCA 72 bp AGTGAATTCCTCCGCAAAGTTGCCCACATCCAGCTCTaGGCGGATTTGGGGCCGGAATGGGGCTGGAATCTT +
Preference number: 3 (lower is better)
Translates to: SEFLRKVAHIQL*ADLGPEWGWNL
Trigger: AAGATTCCAGCCCCATTCCGGCCCCAAATCCGCTCAGAGCTGGATGTGGGCAACTTTGCGGAGGAATTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR CCA 72 bp GGCGCTTCCAGCCCATCGGTCATCACCGCGTTGTTGTaGTCAAAGAGAATGGAGGGTGCCACAAAGGAGTAT +
Preference number: 3 (lower is better)
Translates to: GASSPSVITALL*SKRMEGATKEY
Trigger: ATACTCCTTTGTGGCACCCTCCATTCTCTTTGACCACAACAACGCGGTGATGACCGATGGGCTGGAAGCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR-3UTR CAA 90 bp AACAGGGTAGGGGGTCCCAGTTTAGGAGTTAGCACTCCTAACTCAGTGCTTAGAGGAAAGGACAGTCCCTaGGGGATCAGGTCAGCCGCA +
Preference number: 3 (lower is better)
Translates to: NRVGGPSLGVSTPNSVLRGKDSP*GIRSAA
Trigger: TGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCC...TCTAAGCACTGAGTTAGGAGTGCTAACTCCTAAACTGGGACCCCCTACCCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
3UTR GCA 72 bp CATCACCGCGTTGTTGTGGTCAAAGAGAATGGAGGGTaGCACAAAGGAGTATCCCTGAAAGATTCGGGGGTC +
Preference number: 3 (lower is better)
Translates to: HHRVVVVKENGG*HKGVSLKDSGV
Trigger: GACCCCCGAATCTTTCAGGGATACTCCTTTGTGGCACCCTCCATTCTCTTTGACCACAACAACGCGGTGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR CCA 72 bp CATCGGTCATCACCGCGTTGTTGTGGTCAAAGAGAATaGAGGGTGCCACAAAGGAGTATCCCTGAAAGATTC +
Preference number: 3 (lower is better)
Translates to: HRSSPRCCGQRE*RVPQRSIPERF
Trigger: GAATCTTTCAGGGATACTCCTTTGTGGCACCCTCCATTCTCTTTGACCACAACAACGCGGTGATGACCGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR TCA 90 bp CGGCGGGAGGCGGTGGCGCTCCGCAGCTTCTGCTTCCGCCGCTTGGCCAGGGGTCCGCCTCCTCGTGCATaGAGCTCACGGCCGACACGA +
Preference number: 4 (lower is better)
Translates to: RREAVALRSFCFRRLARGPPPRA*SSRPTR
Trigger: TCGTGTCGGCCGTGAGCTTCATGCACGAGGAGGCGG...ACCCCTGGCCAAGCGGCGGAAGCAGAAGCTGCGGAGCGCCACCGCCTCCCGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR GCA 90 bp CGGCGGGAGGCGGTGGCGCTCCGCAGCTTCTGCTTCCGCCGCTTGGCCAGGGGTGCACCAGCGCCGCCTTaGGCAGCACCTTCATGGCGT +
Preference number: 4 (lower is better)
Translates to: RREAVALRSFCFRRLARGAPAPP*AAPSWR
Trigger: ACGCCATGAAGGTGCTGCGCAAGGCGGCGCTGGTGC...ACCCCTGGCCAAGCGGCGGAAGCAGAAGCTGCGGAGCGCCACCGCCTCCCGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR GCA 90 bp CGGCGGGAGGCGGTGGCGCTCCGCAGCTTCTGCTTCCGCCGCTTGGCCAGGGGTGCACCGAGCGCTCGGTaGGCGTGTGCTCTTGCGTCT +
Preference number: 4 (lower is better)
Translates to: RREAVALRSFCFRRLARGAPSAR*ACALAS
Trigger: AGACGCAAGAGCACACGCGCACCGAGCGCTCGGTGC...ACCCCTGGCCAAGCGGCGGAAGCAGAAGCTGCGGAGCGCCACCGCCTCCCGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR CAA 72 bp AGCACCGAGCGCTCGGTGCGCGTGTGCTCTTGCGTCTaGGCGCGCTGCACCAGCGCCGCCTTGCGCAGCACC +
Preference number: 4 (lower is better)
Translates to: STERSVRVCSCV*ARCTSAALRST
Trigger: GGTGCTGCGCAAGGCGGCGCTGGTGCAGCGCGCCAAGACGCAAGAGCACACGCGCACCGAGCGCTCGGTGCT
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR CAA 72 bp CAGCTCCAGCACCGAGCGCTCGGTGCGCGTGTGCTCTaGCGTCTTGGCGCGCTGCACCAGCGCCGCCTTGCG +
Preference number: 4 (lower is better)
Translates to: QLQHRALGARVL*RLGALHQRRLA
Trigger: CGCAAGGCGGCGCTGGTGCAGCGCGCCAAGACGCAAGAGCACACGCGCACCGAGCGCTCGGTGCTGGAGCTG
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR CAA 72 bp CACGAGCTGCCCCGCAGTCCCTCGAGCTTCAGCCGCTaGGCGGGGTCCACGGTCAGGAGCCCTCGGACCAGC +
Preference number: 4 (lower is better)
Translates to: HELPRSPSSFSR*AGSTVRSPRTS
Trigger: GCTGGTCCGAGGGCTCCTGACCGTGGACCCCGCCAAGCGGCTGAAGCTCGAGGGACTGCGGGGCAGCTCGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR GCA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCGCTCCTGGCCACCGCTaGCCGACCTGGCCGGTCTCC +
Preference number: 4 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSAPGHR*PTWPVS
Trigger: GGAGACCGGCCAGGTCGGGCAGCGGTGGCCAGGAGC...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR GCA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCGCGAGGAGCGCGCGCTaGCGTCCTGCAGCCACGAGC +
Preference number: 4 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSARSAR*RPAATS
Trigger: GCTCGTGGCTGCAGGACGGCAGCGCGCGCTCCTCGC...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR GCA 90 bp AGCAGCTCGGGGGCAGCGTACTGCAGCGTGAAGCAGGGCGTCTGCATGGGCACCCGCTGCAGCAGGTCCTaGGCCACGGGCCCGATCCGA +
Preference number: 4 (lower is better)
Translates to: SSSGAAYCSVKQGVCMGTRCSRS*ATGPIR
Trigger: TCGGATCGGGCCCGTGGCGCAGGACCTGCTGCAGCG...GGTGCCCATGCAGACGCCCTGCTTCACGCTGCAGTACGCTGCCCCCGAGCTGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CCA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCCACCGCTGCCCGACCTaGCCGGTCTCCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSHRCPT*PVSSTR
Trigger: CCTGGTGCTGGAGACCGGCCAGGTCGGGCAGCGGTG...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR CCA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCTGGCCGCTCTGGCGCTaGCGGCAGCGGCGACACACA +
Preference number: 4 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSWPLWR*RQRRHT
Trigger: TGTGTGTCGCCGCTGCCGCCAGCGCCAGAGCGGCCA...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR CCA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCAACTCCTGGCCGCTCTaGCGCTGGCGGCAGCGGCGA +
Preference number: 4 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSNSWPL*RWRQRR
Trigger: TCGCCGCTGCCGCCAGCGCCAGAGCGGCCAGGAGTT...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR CCA 90 bp TGGCGCACCAGCTCCAGCACCGAGCGCTCGGTGCGCGTGTGCTCTTGCGTCTTGTGGCTCTGCCCGCCCTaGCCAGAGGCCCCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: WRTSSSTERSVRVCSCVLWLCPP*PEAPWK
Trigger: CTTCCAGGGGGCCTCTGGCCAGGGCGGGCAGAGCCA...CAAGACGCAAGAGCACACGCGCACCGAGCGCTCGGTGCTGGAGCTGGTGCGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR GCA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCCGCTCGGTGCGCGTGTaGTCTTGCGTCTTGGCGCGC +
Preference number: 4 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSRSVRV*SCVLAR
Trigger: GCGCGCCAAGACGCAAGAGCACACGCGCACCGAGCG...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR GCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGCTCCTGGCCACCGCTaGCCGACCTGGCCGGTCTCC +
Preference number: 4 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSAPGHR*PTWPVS
Trigger: GGAGACCGGCCAGGTCGGGCAGCGGTGGCCAGGAGC...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR GCA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGCTCCTGGCCACCGCTaGCCGACCTGGCCGGTCTCC +
Preference number: 4 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGAPGHR*PTWPVS
Trigger: GGAGACCGGCCAGGTCGGGCAGCGGTGGCCAGGAGC...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR GCA 90 bp AGGCGCAGGGCAGCCACTTCGCGCTGCGTGTTCGCCTCCAGCCTGCGACTGAGGGCAGCCACTTCGCGCTaGGTGTTCGCCTCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: RRRAATSRCVFASSLRLRAATSR*VFASSL
Trigger: CAGGCTGGAGGCGAACACGCAGCGCGAAGTGGCTGC...CCTCAGTCGCAGGCTGGAGGCGAACACGCAGCGCGAAGTGGCTGCCCTGCGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR GCA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGGCACCCCGGGACTCTaGGGCCGCAACCGCGCGAAC +
Preference number: 4 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGGTPGL*GRNRAN
Trigger: GTTCGCGCGGTTGCGGCCGCAGAGTCCCGGGGTGCC...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR GCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGGCACCCCGGGACTCTaGGGCCGCAACCGCGCGAAC +
Preference number: 4 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSGTPGL*GRNRAN
Trigger: GTTCGCGCGGTTGCGGCCGCAGAGTCCCGGGGTGCC...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR GCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGCGAGGAGCGCGCGCTaGCGTCCTGCAGCCACGAGC +
Preference number: 4 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSARSAR*RPAATS
Trigger: GCTCGTGGCTGCAGGACGGCAGCGCGCGCTCCTCGC...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR CCA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCACCAGGAAGGGCGCCTaGCGCACCAGCTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSTRKGA*RTSSST
Trigger: GGTGCTGGAGCTGGTGCGCCAGGCGCCCTTCCTGGT...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR CCA 90 bp CCACGTTGGGGTGTGACTGGCACAGGCGCAGGGCAGCCACTTCGCGCTGCGTGTACTTCTTGTGCCCCCTaGGGCCCCGCGCCCAATCGC +
Preference number: 4 (lower is better)
Translates to: PRWGVTGTGAGQPLRAACTSCAP*GPAPNR
Trigger: GCGATTGGGCGCGGGGCCCCAGGGGGCACAAGAAGT...ACACGCAGCGCGAAGTGGCTGCCCTGCGCCTGTGCCAGTCACACCCCAACGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CCA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCAGCAGGGCGTCTGCATaGGCACCCCGGGACTCTGCG +
Preference number: 4 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSSRASA*APRDSA
Trigger: CGCAGAGTCCCGGGGTGCCCATGCAGACGCCCTGCT...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
3UTR CAA 72 bp GCCTCCCCGTCAAGGGAGAAGCGCCCCTCGCGGATTTaGCACATGATCTCGGCCGCCTGGCTCTGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: ASPSREKRPSRI*HMISAAWLCPP
Trigger: GGGCGGGCAGAGCCAGGCGGCCGAGATCATGTGCAAAATCCGCGAGGGGCGCTTCTCCCTTGACGGGGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR TCA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCAAGCGTAGTGCAGCGTaGCCAGGAAGGGCGCCTGGC +
Preference number: 4 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSKRSAA*PGRAPG
Trigger: GCCAGGCGCCCTTCCTGGTCACGCTGCACTACGCTT...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR TCA 90 bp CGGCGGGAGGCGGTGGCGCTCCGCAGCTTCTGCTTCCGCCGCTTGGCCAGGGGTTCACATAGTCCAGGATaGGGTGCAGCTTGGCATCCG +
Preference number: 4 (lower is better)
Translates to: RREAVALRSFCFRRLARGSHSPG*GAAWHP
Trigger: CGGATGCCAAGCTGCACCTCATCCTGGACTATGTGA...ACCCCTGGCCAAGCGGCGGAAGCAGAAGCTGCGGAGCGCCACCGCCTCCCGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR TCA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGATCTCGCCCTCCAGGGTaGAGGGCGAGGCCCCCGTCA +
Preference number: 4 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGSRPPG*RARPPS
Trigger: TGACGGGGGCCTCGCCCTTCACCCTGGAGGGCGAGA...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR TCA 90 bp GTACTGCAGCGTGAAGCAGGGCGTCTGCATGGGCACCCCGGGACTCTGCGGCCGCAGCGTACTGCAGCGTaGAGCAGGGCGTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: VLQREAGRLHGHPGTLRPQRTAA*SRASAW
Trigger: CCATGCAGACGCCCTGCTTCACGCTGCAGTACGCTG...CGGCCGCAGAGTCCCGGGGTGCCCATGCAGACGCCCTGCTTCACGCTGCAGTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR TCA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCGCTGGGCTGAGGCAGTaGCCATGGATGCCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSAGLRQ*PWMPSP
Trigger: TGGGCTGGGCATCCATGGTCACTGCCTCAGCCCAGC...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR GCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTTGCGTCTTGGCGCGCTaGACCAGCGCCGCCTTGCGC +
Preference number: 4 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSCVLAR*TSAALR
Trigger: GCGCAAGGCGGCGCTGGTGCAGCGCGCCAAGACGCA...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR GCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTCGCTGCAGCAGGTCCTaGGCCACGGGCCCGATCCGA +
Preference number: 4 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSRCSRS*ATGPIR
Trigger: TCGGATCGGGCCCGTGGCGCAGGACCTGCTGCAGCG...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR GCA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCGTGACAGTTGAGGGGTaGCCCTCCCAGGAACGGGGC +
Preference number: 4 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSVTVEG*PSQERG
Trigger: GCCCCGTTCCTGGGAGGGGCACCCCTCAACTGTCAC...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTCACCGCTGCCCGACCTaGCCGGTCTCCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSHRCPT*PVSSTR
Trigger: CCTGGTGCTGGAGACCGGCCAGGTCGGGCAGCGGTG...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR CCA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGATGGCCGCTCTGGCGCTaGCGGCAGCGGCGACACACA +
Preference number: 4 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGWPLWR*RQRRHT
Trigger: TGTGTGTCGCCGCTGCCGCCAGCGCCAGAGCGGCCA...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR CCA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCTTGACTGCGAACTCCTaGCCGCTCTGGCGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSLTANS*PLWRWR
Trigger: CCGCCAGCGCCAGAGCGGCCAGGAGTTCGCAGTCAA...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR CCA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCACGTTGGGGTGTGACTaGCACAGGCGCAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSTLGCD*HRRRAA
Trigger: GGCTGCCCTGCGCCTGTGCCAGTCACACCCCAACGT...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR CCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTTGGCTCTGCCCGCCCTaGCCAGAGGCCCCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSWLCPP*PEAPWK
Trigger: CTTCCAGGGGGCCTCTGGCCAGGGCGGGCAGAGCCA...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR TCA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCTCAGGTTGGCTTCTGTaGTCCGCAGCTCCACGGCGC +
Preference number: 4 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSSGWLL*SAAPRR
Trigger: GCGCCGTGGAGCTGCGGATCACAGAAGCCAACCTGA...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR TCA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCGCTGGTAGAGGTGGGTaGACATCTCCCCGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSAGRGG*TSPRRS
Trigger: TGAGCGGCGGGGAGATGTTCACCCACCTCTACCAGC...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR TCA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCGCCCACATCCAGCTCTaGGCGGATTTGGGGCCGGAA +
Preference number: 4 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSAHIQL*ADLGPE
Trigger: TTCCGGCCCCAAATCCGCTCAGAGCTGGATGTGGGC...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR TCA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGACACCACGTTGGGGTGTaGCTGGCACAGGCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGHHVGV*LAQAQG
Trigger: GCCCTGCGCCTGTGCCAGTCACACCCCAACGTGGTG...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR TCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTCACCACGTTGGGGTGTaGCTGGCACAGGCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSHHVGV*LAQAQG
Trigger: GCCCTGCGCCTGTGCCAGTCACACCCCAACGTGGTG...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR TCA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCCAGCGTACTGCAGCGTaGAGCAGGGCGTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSQRTAA*SRASAW
Trigger: CCATGCAGACGCCCTGCTTCACGCTGCAGTACGCTG...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR GCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTCGCTCGGTGCGCGTGTaGTCTTGCGTCTTGGCGCGC +
Preference number: 4 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSRSVRV*SCVLAR
Trigger: GCGCGCCAAGACGCAAGAGCACACGCGCACCGAGCG...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR GCA 90 bp CCACGTTGGGGTGTGACTGGCACAGGCGCAGGGCAGCCACTTCGCGCTGCGTGTCGAGACACCTCAGCCTaGGTGTTCCTCTCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: PRWGVTGTGAGQPLRAACRDTSA*VFLSPS
Trigger: GGAGGGCGAGAGGAACACGCAGGCTGAGGTGTCTCG...ACACGCAGCGCGAAGTGGCTGCCCTGCGCCTGTGCCAGTCACACCCCAACGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR GCA 90 bp CCAGCACCGAGCGCTCGGTGCGCGTGTGCTCTTGCGTCTTGGCGCGCTGCACCACCCTGGAAGGGGACCTaGCCCGACAGCATCATGTAC +
Preference number: 4 (lower is better)
Translates to: PAPSARCACALASWRAAPPWKGT*PDSIMY
Trigger: GTACATGATGCTGTCGGGGCAGGTCCCCTTCCAGGG...TGGTGCAGCGCGCCAAGACGCAAGAGCACACGCGCACCGAGCGCTCGGTGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR GCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGACCCGAGCGCACTaGGGGCCCAGAGGACTCGAG +
Preference number: 4 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSETRAH*GPRGLE
Trigger: CTCGAGTCCTCTGGGCCCGCAGTGCGCTCGGGTCTC...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR GCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGCGCTCCGCAGCTTCTaGTTCCGCCGCTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSALRSF*FRRLAR
Trigger: CCTGGCCAAGCGGCGGAAGCAGAAGCTGCGGAGCGC...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR GCA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCCCTGGAGGGGCCTTCTaGCCAGAAGAGGCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSPGGAF*PEEAVS
Trigger: GGACACTGCCTCTTCTGGGCAGAAGGCCCCTCCAGG...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CCA 90 bp GACACGAGGCTGCGCAGGATCTGGCTTGCTTCCGACTCGCTGAAGTGCCGCTTCAACTCCTGGCCGCTCTaGCGCTGGCGGCAGCGGCGA +
Preference number: 4 (lower is better)
Translates to: DTRLRRIWLASDSLKCRFNSWPL*RWRQRR
Trigger: TCGCCGCTGCCGCCAGCGCCAGAGCGGCCAGGAGTT...GAAGCGGCACTTCAGCGAGTCGGAAGCAAGCCAGATCCTGCGCAGCCTCGTGTC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CCA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAAGCAGGGCGTCTGCATaGGCACCCCGGGACTCTGCG +
Preference number: 4 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGSRASA*APRDSA
Trigger: CGCAGAGTCCCGGGGTGCCCATGCAGACGCCCTGCT...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR CCA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAATGATCTCGGCCGCCTaGCTCTGCCCGCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGMISAA*LCPPWP
Trigger: TGGCCAGGGCGGGCAGAGCCAGGCGGCCGAGATCAT...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR CCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTATGATCTCGGCCGCCTaGCTCTGCCCGCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSMISAA*LCPPWP
Trigger: TGGCCAGGGCGGGCAGAGCCAGGCGGCCGAGATCAT...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR CCA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCTTGGAGCAGTCCCCCTaGAGGGGCCTTCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSLEQSP*RGLLPR
Trigger: TCTGGGCAGAAGGCCCCTCCAGGGGGACTGCTCCAA...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR TCA 90 bp TCCGACTCGCTGAAGTGCCGCTTCTTGCGGATGTGCTCCAGCAGCTCCCCGCCCTCAGGTTGGCTTCTGTaGTCCGCAGCTCCACGGCGC +
Preference number: 4 (lower is better)
Translates to: SDSLKCRFLRMCSSSSPPSGWLL*SAAPRR
Trigger: GCGCCGTGGAGCTGCGGATCACAGAAGCCAACCTGA...GGGCGGGGAGCTGCTGGAGCACATCCGCAAGAAGCGGCACTTCAGCGAGTCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR TCA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCCCGTGCCCAGCACCTTaGGCAGCTCGAAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSPCPAP*AARSSP
Trigger: TGGAGAACTTCGAGCTGCTCAAGGTGCTGGGCACGG...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR TCA 90 bp CAGGGCCAGCACGATCTCACCCCCATACACGCGCACCTCAGCCTCCTTGAAGTAGGGGCTGCCAGGGGGTaGGTAGACAGGCTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: QGQHDLTPIHAHLSLLEVGAARG*VDRLQP
Trigger: CGGCTGGAGCCTGTCTACTCACCCCCTGGCAGCCCC...TACTTCAAGGAGGCTGAGGTGCGCGTGTATGGGGGTGAGATCGTGCTGGCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR TCA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCCGCGGATTTTGCACATaGTCTCGGCCGCCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSRGFCT*SRPPGS
Trigger: AGAGCCAGGCGGCCGAGATCATGTGCAAAATCCGCG...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR TCA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGCTGGGCTGAGGCAGTaGCCATGGATGCCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGAGLRQ*PWMPSP
Trigger: TGGGCTGGGCATCCATGGTCACTGCCTCAGCCCAGC...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR GCA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGCACCAGCGCCGCCTTaGGCAGCACCTTCATGGCGT +
Preference number: 4 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGAPAPP*AAPSWR
Trigger: ACGCCATGAAGGTGCTGCGCAAGGCGGCGCTGGTGC...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR GCA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGCGCGTGTGCTCTTaGGTCTTGGCGCGCTGCACC +
Preference number: 4 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGVRVCS*VLARCT
Trigger: GGTGCAGCGCGCCAAGACGCAAGAGCACACGCGCAC...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR GCA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCTTACAAAGCAGCCGCTaGAGCAGGTCCTGCGCCACG +
Preference number: 4 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSLQSSR*SRSCAT
Trigger: CGTGGCGCAGGACCTGCTGCAGCGGCTGCTTTGTAA...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR GCA 90 bp AGCAGCTCGGGGGCAGCGTACTGCAGCGTGAAGCAGGGCGTCTGCATGGGCACCTTACAAAGCAGCCGCTaGAGCAGGTCCTGCGCCACG +
Preference number: 4 (lower is better)
Translates to: SSSGAAYCSVKQGVCMGTLQSSR*SRSCAT
Trigger: CGTGGCGCAGGACCTGCTGCAGCGGCTGCTTTGTAA...GGTGCCCATGCAGACGCCCTGCTTCACGCTGCAGTACGCTGCCCCCGAGCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR GCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGCAGCCACTTCGCGCTaGGTGTTCGCCTCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSAATSR*VFASSL
Trigger: CAGGCTGGAGGCGAACACGCAGCGCGAAGTGGCTGC...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR GCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTCGCTTCTTGCGGATGTaGTCCAGCAGCTCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSRFLRM*SSSSPP
Trigger: GGGCGGGGAGCTGCTGGAGCACATCCGCAAGAAGCG...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR GCA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAACGCCCGCCTCCTCGTaGATGAAGCTCACGGCCGAC +
Preference number: 4 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGTPASS*MKLTAD
Trigger: GTCGGCCGTGAGCTTCATGCACGAGGAGGCGGGCGT...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR GCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGTGAAGCAGGGCGTCTaGATGGGCACCCCGGGACTC +
Preference number: 4 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSVKQGV*MGTPGL
Trigger: GAGTCCCGGGGTGCCCATGCAGACGCCCTGCTTCAC...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR GCA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAAGCAGGGCGTCTaGATGGGCACCCCGGGACTC +
Preference number: 4 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGVKQGV*MGTPGL
Trigger: GAGTCCCGGGGTGCCCATGCAGACGCCCTGCTTCAC...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR GCA 90 bp CCCGCAGCAGCTCCAGGACCAGGTACGTGTGCAGCTGGTCGTGATGCACCTCGTGTGAAGCAGGGCGTCTaGATGGGCACCCCGGGACTC +
Preference number: 4 (lower is better)
Translates to: PAAAPGPGTCAAGRDAPRVKQGV*MGTPGL
Trigger: GAGTCCCGGGGTGCCCATGCAGACGCCCTGCTTCAC...ACGAGGTGCATCACGACCAGCTGCACACGTACCTGGTCCTGGAGCTGCTGCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR GCA 90 bp TCCGACTCGCTGAAGTGCCGCTTCTTGCGGATGTGCTCCAGCAGCTCCCCGCCCTCCTCGGATACACCCTaGCAGGCCTCCCCGTCAAGG +
Preference number: 4 (lower is better)
Translates to: SDSLKCRFLRMCSSSSPPSSDTP*QASPSR
Trigger: CCTTGACGGGGAGGCCTGGCAGGGTGTATCCGAGGA...GGGCGGGGAGCTGCTGGAGCACATCCGCAAGAAGCGGCACTTCAGCGAGTCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR GCA 90 bp CAAAGTTGCCCACATCCAGCTCTGAGCGGATTTGGGGCCGGAATGGGGCTGGAAGCGAGGAGCGCGCGCTaGCGTCCTGCAGCCACGAGC +
Preference number: 4 (lower is better)
Translates to: QSCPHPALSGFGAGMGLEARSAR*RPAATS
Trigger: GCTCGTGGCTGCAGGACGGCAGCGCGCGCTCCTCGC...TTCCAGCCCCATTCCGGCCCCAAATCCGCTCAGAGCTGGATGTGGGCAACTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CCA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGATGTGCTCTTGCGTCTTaGCGCGCTGCACCAGCGCCG +
Preference number: 4 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGCALAS*RAAPAP
Trigger: CGGCGCTGGTGCAGCGCGCCAAGACGCAAGAGCACA...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR CCA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCTCCGTGAGGACAATGTaGCCCTCGGAGTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSSVRTM*PSESSS
Trigger: GCTGCTGGACTCCGAGGGCCACATTGTCCTCACGGA...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR CCA 90 bp TGGCGCACCAGCTCCAGCACCGAGCGCTCGGTGCGCGTGTGCTCTTGCGTCTTGTCCGTGAGGACAATGTaGCCCTCGGAGTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: WRTSSSTERSVRVCSCVLSVRTM*PSESSS
Trigger: GCTGCTGGACTCCGAGGGCCACATTGTCCTCACGGA...CAAGACGCAAGAGCACACGCGCACCGAGCGCTCGGTGCTGGAGCTGGTGCGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CCA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCAGCTCTGAGCGGATTTaGGGCCGGAATGGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSSSERI*GRNGAG
Trigger: TCCAGCCCCATTCCGGCCCCAAATCCGCTCAGAGCT...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR CCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTACAGAAAAGCTGCCCTaGCCCAGCGCAGGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSTEKLP*PSAGSR
Trigger: GCGGGAGCCTGCGCTGGGCCAGGGCAGCTTTTCTGT...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR CCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTCGAGCTTCAGCCGCTTaGCGGGGTCCACGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSRASAA*RGPRSG
Trigger: TCCTGACCGTGGACCCCGCCAAGCGGCTGAAGCTCG...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR TCA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGATCAGGTTGGCTTCTGTaGTCCGCAGCTCCACGGCGC +
Preference number: 4 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGSGWLL*SAAPRR
Trigger: GCGCCGTGGAGCTGCGGATCACAGAAGCCAACCTGA...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR TCA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGATCAGCCCGAAGTCCGTaGGGACAATGTGGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGSARSP*GQCGPR
Trigger: CCGAGGGCCACATTGTCCTCACGGACTTCGGGCTGA...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR TCA 90 bp AAGGTCCGCTCTTTCTCCTCCGTCAGGAACTCCTTGCTCAGCCCGAAGTCCGTGTCTCGCCCTCCAGGGTaGAGGGCGAGGCCCCCGTCA +
Preference number: 4 (lower is better)
Translates to: KVRSFSSVRNSLLSPKSVSRPPG*RARPPS
Trigger: TGACGGGGGCCTCGCCCTTCACCCTGGAGGGCGAGA...CACGGACTTCGGGCTGAGCAAGGAGTTCCTGACGGAGGAGAAAGAGCGGACCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR TCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGCCCACATCCAGCTCTaGGCGGATTTGGGGCCGGAA +
Preference number: 4 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSAHIQL*ADLGPE
Trigger: TTCCGGCCCCAAATCCGCTCAGAGCTGGATGTGGGC...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR TCA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCCAGGCTCCAGCCGAGTaGATTCCTCCGCAAAGTTGC +
Preference number: 4 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSQAPAE*IPPQSC
Trigger: GCAACTTTGCGGAGGAATTCACTCGGCTGGAGCCTG...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR TCA 90 bp AAGGTCCGCTCTTTCTCCTCCGTCAGGAACTCCTTGCTCAGCCCGAAGTCCGTGAGAGGCCTCCGGGAGTaGGCCGGGCTCCCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: KVRSFSSVRNSLLSPKSVRGLRE*AGLPGH
Trigger: GTGACCTGGGAGCCCGGCTCACTCCCGGAGGCCTCT...CACGGACTTCGGGCTGAGCAAGGAGTTCCTGACGGAGGAGAAAGAGCGGACCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR GCA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCCTCACCTTCTCCTCGTaGCCGGTCAGGTTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSLTFSS*PVRLAS
Trigger: AGAAGCCAACCTGACCGGGCACGAGGAGAAGGTGAG...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR GCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGCACCAGGAACACCTTaGCGTAGGCTCCCGTGCCCA +
Preference number: 4 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSAPGTP*RRLPCP
Trigger: TGGGCACGGGAGCCTACGGCAAGGTGTTCCTGGTGC...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR GCA 90 bp TGCAGATTCACCACGTTGGGGTGTGACTGGCACAGGCGCAGGGCAGCCACTTCGGTGCGCGTGTGCTCTTaGGTCTTGGCGCGCTGCACC +
Preference number: 4 (lower is better)
Translates to: CRFTTLGCDWHRRRAATSVRVCS*VLARCT
Trigger: GGTGCAGCGCGCCAAGACGCAAGAGCACACGCGCAC...CGAAGTGGCTGCCCTGCGCCTGTGCCAGTCACACCCCAACGTGGTGAATCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR GCA 90 bp ACGAGGCTGCGCAGGATCTGGCTTGCTTCCGACTCGCTGAAGTGCCGCTTCTTGCGCTCGGTGCGCGTGTaGTCTTGCGTCTTGGCGCGC +
Preference number: 4 (lower is better)
Translates to: TRLRRIWLASDSLKCRFLRSVRV*SCVLAR
Trigger: GCGCGCCAAGACGCAAGAGCACACGCGCACCGAGCG...CAAGAAGCGGCACTTCAGCGAGTCGGAAGCAAGCCAGATCCTGCGCAGCCTCGT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR GCA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCATGATGCCGAGCTTGTaGAGGTGTTCCAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSMMPSL*RCSRAS
Trigger: GCTGGCCCTGGAACACCTGCACAAGCTCGGCATCAT...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR GCA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCTCCGACTCGCTGAAGTaGCGCTTCTTGCGGATGTGC +
Preference number: 4 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSSDSLK*RFLRMC
Trigger: GCACATCCGCAAGAAGCGGCACTTCAGCGAGTCGGA...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR GCA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGACGGCCGACACGAGGCTaGGCAGGATCTGGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGRPTRG*AGSGLL
Trigger: AAGCAAGCCAGATCCTGCGCAGCCTCGTGTCGGCCG...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR GCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTCGGCCGACACGAGGCTaGGCAGGATCTGGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSRPTRG*AGSGLL
Trigger: AAGCAAGCCAGATCCTGCGCAGCCTCGTGTCGGCCG...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR GCA 90 bp CCCGCAGCAGCTCCAGGACCAGGTACGTGTGCAGCTGGTCGTGATGCACCTCGTCGGCCGACACGAGGCTaGGCAGGATCTGGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: PAAAPGPGTCAAGRDAPRRPTRG*AGSGLL
Trigger: AAGCAAGCCAGATCCTGCGCAGCCTCGTGTCGGCCG...ACGAGGTGCATCACGACCAGCTGCACACGTACCTGGTCCTGGAGCTGCTGCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR GCA 90 bp ACAGGCTCCAGCCGAGTGAATTCCTCCGCAAAGTTGCCCACATCCAGCTCTGAGGGCACCCCGGGACTCTaGGGCCGCAACCGCGCGAAC +
Preference number: 4 (lower is better)
Translates to: TGSSRVNSSAKLPTSSSEGTPGL*GRNRAN
Trigger: GTTCGCGCGGTTGCGGCCGCAGAGTCCCGGGGTGCC...CTCAGAGCTGGATGTGGGCAACTTTGCGGAGGAATTCACTCGGCTGGAGCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR GCA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGATCCTCGGATACACCCTaGCAGGCCTCCCCGTCAAGG +
Preference number: 4 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGSSDTP*QASPSR
Trigger: CCTTGACGGGGAGGCCTGGCAGGGTGTATCCGAGGA...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR GCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTTCCTCGGATACACCCTaGCAGGCCTCCCCGTCAAGG +
Preference number: 4 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSSSDTP*QASPSR
Trigger: CCTTGACGGGGAGGCCTGGCAGGGTGTATCCGAGGA...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR GCA 90 bp CAGGGCCAGCACGATCTCACCCCCATACACGCGCACCTCAGCCTCCTTGAAGTAGCGCTCCGCAGCTTCTaGTTCCGCCGCTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: QGQHDLTPIHAHLSLLEVALRSF*FRRLAR
Trigger: CCTGGCCAAGCGGCGGAAGCAGAAGCTGCGGAGCGC...TACTTCAAGGAGGCTGAGGTGCGCGTGTATGGGGGTGAGATCGTGCTGGCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR GCA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGGCAGTGACCATGGATaGCCAGCCCAGACCCCCAAG +
Preference number: 4 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGGSDHG*PAQTPK
Trigger: CTTGGGGGTCTGGGCTGGGCATCCATGGTCACTGCC...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR GCA 90 bp AGCAGCTCGGGGGCAGCGTACTGCAGCGTGAAGCAGGGCGTCTGCATGGGCACCGCACCAGGAACACCTTaGCGTAGGCTTCTCCTCGTG +
Preference number: 4 (lower is better)
Translates to: SSSGAAYCSVKQGVCMGTAPGTP*RRLLLV
Trigger: CACGAGGAGAAGCCTACGGCAAGGTGTTCCTGGTGC...GGTGCCCATGCAGACGCCCTGCTTCACGCTGCAGTACGCTGCCCCCGAGCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CCA 90 bp ACGAGGCTGCGCAGGATCTGGCTTGCTTCCGACTCGCTGAAGTGCCGCTTCTTGACCAGGAAGGGCGCCTaGCGCACCAGCTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: TRLRRIWLASDSLKCRFLTRKGA*RTSSST
Trigger: GGTGCTGGAGCTGGTGCGCCAGGCGCCCTTCCTGGT...CAAGAAGCGGCACTTCAGCGAGTCGGAAGCAAGCCAGATCCTGCGCAGCCTCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CCA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGGGCCGGAATGGGGCTaGAATCTTCCTGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGGPEWG*NLPGSQ
Trigger: CTGGCTGCCAGGAAGATTCCAGCCCCATTCCGGCCC...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR CCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGGGCCGGAATGGGGCTaGAATCTTCCTGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSGPEWG*NLPGSQ
Trigger: CTGGCTGCCAGGAAGATTCCAGCCCCATTCCGGCCC...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR CCA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCTCCAGCTCGTACTGCTaGAAGAAGGGCGAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSSSSYC*KKGESC
Trigger: GCAGGACTCGCCCTTCTTCCAGCAGTACGAGCTGGA...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528355.5
CDS-3UTR CCA 90 bp TGCAGATTCACCACGTTGGGGTGTGACTGGCACAGGCGCAGGGCAGCCACTTCGACAGAAAAGCTGCCCTaGCCCAGCGCAGGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: CRFTTLGCDWHRRRAATSTEKLP*PSAGSR
Trigger: GCGGGAGCCTGCGCTGGGCCAGGGCAGCTTTTCTGT...CGAAGTGGCTGCCCTGCGCCTGTGCCAGTCACACCCCAACGTGGTGAATCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CCA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCCTCGGACCAGCTCCTTaGCTTCCTCGGATACACCCT +
Preference number: 4 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSLGPAP*LPRIHP
Trigger: AGGGTGTATCCGAGGAAGCCAAGGAGCTGGTCCGAG...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR CCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGCCCGGCGGGAGGCGGTaGCGCTCCGCAGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQPGGRR*RSAASA
Trigger: AGCAGAAGCTGCGGAGCGCCACCGCCTCCCGCCGGG...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CCA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCGAAAGGACAGTCCCTTaGGGATCAGGTCAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSERTVP*GSGQPQ
Trigger: CTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR CCA 90 bp TCCTGCATCATAGCGCTCCTGGCCACCGCTGCCCGACCTGGCCGGTCTCCAGCAGAAAGGACAGTCCCTTaGGGATCAGGTCAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: SCIIALLATAARPGRSPAERTVP*GSGQPQ
Trigger: CTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC...TGCTGGAGACCGGCCAGGTCGGGCAGCGGTGGCCAGGAGCGCTATGATGCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CCA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGGGGCTCTTTCCTGTTaGAGCAGTCCCCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGGALSC*SSPPGG
Trigger: CCCTCCAGGGGGACTGCTCCAACAGGAAAGAGCCCC...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR TCA 90 bp GGGCTGGAATCTTCCTGGCAGCCAGAGCCACCCAATCGAGGCCCTGGAAGAAGGTCAGCCCGAAGTCCGTaGGGACAATGTGGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: GLESSWQPEPPNRGPGRRSARSP*GQCGPR
Trigger: CCGAGGGCCACATTGTCCTCACGGACTTCGGGCTGA...CCTTCTTCCAGGGCCTCGATTGGGTGGCTCTGGCTGCCAGGAAGATTCCAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR TCA 90 bp TGGCGCACCAGCTCCAGCACCGAGCGCTCGGTGCGCGTGTGCTCTTGCGTCTTGCCGTCTTGCTACGGATaGTTTCGGGGGCCATGTACT +
Preference number: 4 (lower is better)
Translates to: WRTSSSTERSVRVCSCVLPSCYG*FRGPCT
Trigger: AGTACATGGCCCCCGAAATCATCCGTAGCAAGACGG...CAAGACGCAAGAGCACACGCGCACCGAGCGCTCGGTGCTGGAGCTGGTGCGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR TCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGTCTCGCCCTCCAGGGTaGAGGGCGAGGCCCCCGTCA +
Preference number: 4 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQSRPPG*RARPPS
Trigger: TGACGGGGGCCTCGCCCTTCACCCTGGAGGGCGAGA...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR TCA 90 bp AAGGTCCGCTCTTTCTCCTCCGTCAGGAACTCCTTGCTCAGCCCGAAGTCCGTGCACCACGTTGGGGTGTaGCTGGCACAGGCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: KVRSFSSVRNSLLSPKSVHHVGV*LAQAQG
Trigger: GCCCTGCGCCTGTGCCAGTCACACCCCAACGTGGTG...CACGGACTTCGGGCTGAGCAAGGAGTTCCTGACGGAGGAGAAAGAGCGGACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR GCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGTGCGTCTTGGCGCGCTaGACCAGCGCCGCCTTGCGC +
Preference number: 4 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQCVLAR*TSAALR
Trigger: GCGCAAGGCGGCGCTGGTGCAGCGCGCCAAGACGCA...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR GCA 90 bp CAGGCGCAGGGCAGCCACTTCGCGCTGCGTGTTCGCCTCCAGCCTGCGACTGAGATTCCTCCGCAAAGTTaGCCACATCCAGCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: QAQGSHFALRVRLQPATEIPPQS*PHPALS
Trigger: GCTCAGAGCTGGATGTGGGCAACTTTGCGGAGGAAT...CTCAGTCGCAGGCTGGAGGCGAACACGCAGCGCGAAGTGGCTGCCCTGCGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR GCA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGACACACAGAAAAGCTaGCCTGGCCCAGCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGDTQKS*PGPAQA
Trigger: AGCCTGCGCTGGGCCAGGGCAGCTTTTCTGTGTGTC...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR GCA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCACTGAGGATCTTGACTaGGAACTCCTGGCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSTEDLD*ELLAAL
Trigger: CAGAGCGGCCAGGAGTTCGCAGTCAAGATCCTCAGT...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR GCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTCCCTGGAAGGGGACCTaGCCCGACAGCATCATGTAC +
Preference number: 4 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSPWKGT*PDSIMY
Trigger: GTACATGATGCTGTCGGGGCAGGTCCCCTTCCAGGG...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR GCA 90 bp AAGGTCCGCTCTTTCTCCTCCGTCAGGAACTCCTTGCTCAGCCCGAAGTCCGTGGAGACCCGAGCGCACTaGGGGCCCAGAGGACTCGAG +
Preference number: 4 (lower is better)
Translates to: KVRSFSSVRNSLLSPKSVETRAH*GPRGLE
Trigger: CTCGAGTCCTCTGGGCCCGCAGTGCGCTCGGGTCTC...CACGGACTTCGGGCTGAGCAAGGAGTTCCTGACGGAGGAGAAAGAGCGGACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR GCA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCGCACTCCTAACTCAGTaGTTAGAAGTGGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSALLTQ*LEVGEG
Trigger: CCCCTCCCCCACTTCTAAGCACTGAGTTAGGAGTGC...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CCA 90 bp GGATACACCCTGCCAGGCCTCCCCGTCAAGGGAGAAGCGCCCCTCGCGGATTTTTGCGCAGCACCTTCATaGCGTACAGCTTCCCCGCGT +
Preference number: 4 (lower is better)
Translates to: GYTLPGLPVKGEAPLADFCAAPS*RTASPR
Trigger: ACGCGGGGAAGCTGTACGCCATGAAGGTGCTGCGCA...AAAATCCGCGAGGGGCGCTTCTCCCTTGACGGGGAGGCCTGGCAGGGTGTATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CCA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGATCCGTGAGGACAATGTaGCCCTCGGAGTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGSVRTM*PSESSS
Trigger: GCTGCTGGACTCCGAGGGCCACATTGTCCTCACGGA...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR CCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGTGGCCGCTCTGGCGCTaGCGGCAGCGGCGACACACA +
Preference number: 4 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQWPLWR*RQRRHT
Trigger: TGTGTGTCGCCGCTGCCGCCAGCGCCAGAGCGGCCA...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGTGGCTCTGCCCGCCCTaGCCAGAGGCCCCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQWLCPP*PEAPWK
Trigger: CTTCCAGGGGGCCTCTGGCCAGGGCGGGCAGAGCCA...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CCA 90 bp AAGGTCCGCTCTTTCTCCTCCGTCAGGAACTCCTTGCTCAGCCCGAAGTCCGTGATGATCTCGGCCGCCTaGCTCTGCCCGCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: KVRSFSSVRNSLLSPKSVMISAA*LCPPWP
Trigger: TGGCCAGGGCGGGCAGAGCCAGGCGGCCGAGATCAT...CACGGACTTCGGGCTGAGCAAGGAGTTCCTGACGGAGGAGAAAGAGCGGACCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTTCTGCTTCCGCCGCTTaGCCAGGGGTGCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSSASAA*PGVHSP
Trigger: TGGAGAATGCACCCCTGGCCAAGCGGCGGAAGCAGA...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR TCA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGCACCTCAGCCTCCTTaGAGTACTGGCGCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGAPQPP*STGAGR
Trigger: TCTACCAGCGCCAGTACTTCAAGGAGGCTGAGGTGC...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR TCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTCAGGCTCCAGCCGAGTaGATTCCTCCGCAAAGTTGC +
Preference number: 4 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSQAPAE*IPPQSC
Trigger: GCAACTTTGCGGAGGAATTCACTCGGCTGGAGCCTG...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR TCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGTGTGCAGCTGGTCGTaGTGCACCTCGTGCAGATTC +
Preference number: 4 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSVCSWS*CTSCRF
Trigger: GAATCTGCACGAGGTGCATCACGACCAGCTGCACAC...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR TCA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCAGACAGTCCATAAAGTaGCAGTTGAGGGGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSRQSIK*QLRGAP
Trigger: AGGGGCACCCCTCAACTGTCACTTTATGGACTGTCT...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR GCA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGACTCACCTTCTCCTCGTaGCCGGTCAGGTTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGLTFSS*PVRLAS
Trigger: AGAAGCCAACCTGACCGGGCACGAGGAGAAGGTGAG...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR GCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTATGATGCCGAGCTTGTaGAGGTGTTCCAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSMMPSL*RCSRAS
Trigger: GCTGGCCCTGGAACACCTGCACAAGCTCGGCATCAT...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR GCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTTCCACAGCCTTGCCATaGCCCGTCTTGCTACGGATG +
Preference number: 4 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSSTALP*PVLLRM
Trigger: CATCCGTAGCAAGACGGGGCATGGCAAGGCTGTGGA...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR GCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTACCAGTCCACAGCCTTaGCATGCCCCGTCTTGCTAC +
Preference number: 4 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSTSPQP*HAPSCY
Trigger: GTAGCAAGACGGGGCATGGCAAGGCTGTGGACTGGT...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR GCA 90 bp CCGCTTGCCCCGGTTGAATGCCATGAAGGTGGCGTTGAGACCCGAGCGCACTGCACCAGTCCACAGCCTTaGCATGCCCCGTCTTGCTAC +
Preference number: 4 (lower is better)
Translates to: PLAPVECHEGGVETRAHCTSPQP*HAPSCY
Trigger: GTAGCAAGACGGGGCATGGCAAGGCTGTGGACTGGT...GCAGTGCGCTCGGGTCTCAACGCCACCTTCATGGCATTCAACCGGGGCAAGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR GCA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGCTCGAAGAGCAAGATaGCCAGGCTCCACCAGTCCA +
Preference number: 4 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGARRAR*PGSTSP
Trigger: TGGACTGGTGGAGCCTGGGCATCTTGCTCTTCGAGC...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR GCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTTCCGACTCGCTGAAGTaGCGCTTCTTGCGGATGTGC +
Preference number: 4 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSSDSLK*RFLRMC
Trigger: GCACATCCGCAAGAAGCGGCACTTCAGCGAGTCGGA...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR GCA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGCGCAGGATCTGGCTTaGTTCCGACTCGCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGAQDLA*FRLAEV
Trigger: CACTTCAGCGAGTCGGAAGCAAGCCAGATCCTGCGC...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR GCA 90 bp AAGGTCCGCTCTTTCTCCTCCGTCAGGAACTCCTTGCTCAGCCCGAAGTCCGTGTCGGGGGCAGCGTACTaGAGCGTGAAGCAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: KVRSFSSVRNSLLSPKSVSGAAY*SVKQGV
Trigger: GACGCCCTGCTTCACGCTGCAGTACGCTGCCCCCGA...CACGGACTTCGGGCTGAGCAAGGAGTTCCTGACGGAGGAGAAAGAGCGGACCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGACTTCTTGTGCCCCCTaGGGCCCCGCGCCCAATCGC +
Preference number: 4 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQTSCAP*GPAPNR
Trigger: GCGATTGGGCGCGGGGCCCCAGGGGGCACAAGAAGT...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CCA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGATTTGGGGCCGGAATaGGGCTGGAATCTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGDLGPE*GWNLPG
Trigger: GCCAGGAAGATTCCAGCCCCATTCCGGCCCCAAATC...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR CCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGCAGATTCACCACGTTaGGGTGTGACTGGCACAGGC +
Preference number: 4 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSADSPR*GVTGTG
Trigger: GCCTGTGCCAGTCACACCCCAACGTGGTGAATCTGC...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR CCA 90 bp GACACGAGGCTGCGCAGGATCTGGCTTGCTTCCGACTCGCTGAAGTGCCGCTTCAGGCTGCGCAGGATCTaGCTTGCTTCCGACTCGCTG +
Preference number: 4 (lower is better)
Translates to: DTRLRRIWLASDSLKCRFRLRRI*LASDSL
Trigger: CAGCGAGTCGGAAGCAAGCCAGATCCTGCGCAGCCT...GAAGCGGCACTTCAGCGAGTCGGAAGCAAGCCAGATCCTGCGCAGCCTCGTGTC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTCTCGGACCAGCTCCTTaGCTTCCTCGGATACACCCT +
Preference number: 4 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSLGPAP*LPRIHP
Trigger: AGGGTGTATCCGAGGAAGCCAAGGAGCTGGTCCGAG...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR CCA 90 bp AAGGTCCGCTCTTTCTCCTCCGTCAGGAACTCCTTGCTCAGCCCGAAGTCCGTGCGAGCTTCAGCCGCTTaGCGGGGTCCACGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: KVRSFSSVRNSLLSPKSVRASAA*RGPRSG
Trigger: TCCTGACCGTGGACCCCGCCAAGCGGCTGAAGCTCG...CACGGACTTCGGGCTGAGCAAGGAGTTCCTGACGGAGGAGAAAGAGCGGACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR TCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGAAGCGTAGTGCAGCGTaGCCAGGAAGGGCGCCTGGC +
Preference number: 4 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQKRSAA*PGRAPG
Trigger: GCCAGGCGCCCTTCCTGGTCACGCTGCACTACGCTT...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR TCA 90 bp ACAGGCTCCAGCCGAGTGAATTCCTCCGCAAAGTTGCCCACATCCAGCTCTGAGAAGCGTAGTGCAGCGTaGCCAGGAAGGGCGCCTGGC +
Preference number: 4 (lower is better)
Translates to: TGSSRVNSSAKLPTSSSEKRSAA*PGRAPG
Trigger: GCCAGGCGCCCTTCCTGGTCACGCTGCACTACGCTT...CTCAGAGCTGGATGTGGGCAACTTTGCGGAGGAATTCACTCGGCTGGAGCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR TCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTCCGTCTTGCTACGGATaGTTTCGGGGGCCATGTACT +
Preference number: 4 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSPSCYG*FRGPCT
Trigger: AGTACATGGCCCCCGAAATCATCCGTAGCAAGACGG...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR TCA 90 bp CAAAGTTGCCCACATCCAGCTCTGAGCGGATTTGGGGCCGGAATGGGGCTGGAAGCCCACATCCAGCTCTaGGCGGATTTGGGGCCGGAA +
Preference number: 4 (lower is better)
Translates to: QSCPHPALSGFGAGMGLEAHIQL*ADLGPE
Trigger: TTCCGGCCCCAAATCCGCTCAGAGCTGGATGTGGGC...TTCCAGCCCCATTCCGGCCCCAAATCCGCTCAGAGCTGGATGTGGGCAACTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR TCA 90 bp TGCAGATTCACCACGTTGGGGTGTGACTGGCACAGGCGCAGGGCAGCCACTTCGTTGCTTCCGACTCGCTaGAGTGCCGCTTCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: CRFTTLGCDWHRRRAATSLLPTR*SAASCG
Trigger: TCCGCAAGAAGCGGCACTTCAGCGAGTCGGAAGCAA...CGAAGTGGCTGCCCTGCGCCTGTGCCAGTCACACCCCAACGTGGTGAATCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR TCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGCCGCCTCCTCGTGCATaGAGCTCACGGCCGACACGA +
Preference number: 4 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQPPPRA*SSRPTR
Trigger: TCGTGTCGGCCGTGAGCTTCATGCACGAGGAGGCGG...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR TCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGCATCATGTACAGAATaGCGCCCAGGCTCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSASCTE*RPGSRG
Trigger: ACCTCTGGAGCCTGGGCGTCATTCTGTACATGATGC...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR GCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGGCACCAGCGCCGCCTTaGGCAGCACCTTCATGGCGT +
Preference number: 4 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQAPAPP*AAPSWR
Trigger: ACGCCATGAAGGTGCTGCGCAAGGCGGCGCTGGTGC...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR GCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGGTGCGCGTGTGCTCTTaGGTCTTGGCGCGCTGCACC +
Preference number: 4 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQVRVCS*VLARCT
Trigger: GGTGCAGCGCGCCAAGACGCAAGAGCACACGCGCAC...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR GCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGGCACCGAGCGCTCGGTaGGCGTGTGCTCTTGCGTCT +
Preference number: 4 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQAPSAR*ACALAS
Trigger: AGACGCAAGAGCACACGCGCACCGAGCGCTCGGTGC...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR GCA 90 bp TGCAGATTCACCACGTTGGGGTGTGACTGGCACAGGCGCAGGGCAGCCACTTCGTCCACAGCCTTGCCATaGCCCGTCTTGCTACGGATG +
Preference number: 4 (lower is better)
Translates to: CRFTTLGCDWHRRRAATSSTALP*PVLLRM
Trigger: CATCCGTAGCAAGACGGGGCATGGCAAGGCTGTGGA...CGAAGTGGCTGCCCTGCGCCTGTGCCAGTCACACCCCAACGTGGTGAATCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR GCA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAACTGAGGATCTTGACTaGGAACTCCTGGCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGTEDLD*ELLAAL
Trigger: CAGAGCGGCCAGGAGTTCGCAGTCAAGATCCTCAGT...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR GCA 90 bp GTAGACAGGCTCCAGCCGAGTGAATTCCTCCGCAAAGTTGCCCACATCCAGCTCACGCCCGCCTCCTCGTaGATGAAGCTCACGGCCGAC +
Preference number: 4 (lower is better)
Translates to: VDRLQPSEFLRKVAHIQLTPASS*MKLTAD
Trigger: GTCGGCCGTGAGCTTCATGCACGAGGAGGCGGGCGT...GAGCTGGATGTGGGCAACTTTGCGGAGGAATTCACTCGGCTGGAGCCTGTCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR GCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGTCGGGGGCAGCGTACTaGAGCGTGAAGCAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQSGAAY*SVKQGV
Trigger: GACGCCCTGCTTCACGCTGCAGTACGCTGCCCCCGA...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGTGTGCTCTTGCGTCTTaGCGCGCTGCACCAGCGCCG +
Preference number: 4 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQCALAS*RAAPAP
Trigger: CGGCGCTGGTGCAGCGCGCCAAGACGCAAGAGCACA...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CCA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGACCCTGGAAGAAGGGATaGTTCCGGACTTCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGPWKKG*FRTSCA
Trigger: GGCACAAGAAGTCCGGAACCATCCCTTCTTCCAGGG...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR CCA 90 bp AGGCGCAGGGCAGCCACTTCGCGCTGCGTGTTCGCCTCCAGCCTGCGACTGAGGATCACCGCGTTGTTGTaGTCAAAGAGAATGGAGGGT +
Preference number: 4 (lower is better)
Translates to: RRRAATSRCVFASSLRLRITALL*SKRMEG
Trigger: ACCCTCCATTCTCTTTGACCACAACAACGCGGTGAT...CCTCAGTCGCAGGCTGGAGGCGAACACGCAGCGCGAAGTGGCTGCCCTGCGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGACAGAAAAGCTGCCCTaGCCCAGCGCAGGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQTEKLP*PSAGSR
Trigger: GCGGGAGCCTGCGCTGGGCCAGGGCAGCTTTTCTGT...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CCA 90 bp GTAGACAGGCTCCAGCCGAGTGAATTCCTCCGCAAAGTTGCCCACATCCAGCTCACGTTGGGGTGTGACTaGCACAGGCGCAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: VDRLQPSEFLRKVAHIQLTLGCD*HRRRAA
Trigger: GGCTGCCCTGCGCCTGTGCCAGTCACACCCCAACGT...GAGCTGGATGTGGGCAACTTTGCGGAGGAATTCACTCGGCTGGAGCCTGTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CCA 90 bp GGGCTGGAATCTTCCTGGCAGCCAGAGCCACCCAATCGAGGCCCTGGAAGAAGGGCAGATTCACCACGTTaGGGTGTGACTGGCACAGGC +
Preference number: 4 (lower is better)
Translates to: GLESSWQPEPPNRGPGRRADSPR*GVTGTG
Trigger: GCCTGTGCCAGTCACACCCCAACGTGGTGAATCTGC...CCTTCTTCCAGGGCCTCGATTGGGTGGCTCTGGCTGCCAGGAAGATTCCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGCGAGCTTCAGCCGCTTaGCGGGGTCCACGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQRASAA*RGPRSG
Trigger: TCCTGACCGTGGACCCCGCCAAGCGGCTGAAGCTCG...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CCA 90 bp GTCAAAGAGAATGGAGGGTGCCACAAAGGAGTATCCCTGAAAGATTCGGGGGTCCCCGGCGGGAGGCGGTaGCGCTCCGCAGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: VKENGGCHKGVSLKDSGVPGGRR*RSAASA
Trigger: AGCAGAAGCTGCGGAGCGCCACCGCCTCCCGCCGGG...GACCCCCGAATCTTTCAGGGATACTCCTTTGTGGCACCCTCCATTCTCTTTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTTACTTCTGCTCTGTCTaGGAGTGGGGTGGGGTAGGA +
Preference number: 4 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSYFCSV*EWGGVG
Trigger: TCCTACCCCACCCCACTCCCAGACAGAGCAGAAGTA...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR CCA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGGGTGGGTGAGAAGATaGCCTCCTCTTTTAGGAGCC +
Preference number: 4 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGGWVRR*PPLLGA
Trigger: GGCTCCTAAAAGAGGAGGCCATCTTCTCACCCACCC...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR TCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGGCTGGTAGAGGTGGGTaGACATCTCCCCGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQAGRGG*TSPRRS
Trigger: TGAGCGGCGGGGAGATGTTCACCCACCTCTACCAGC...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR TCA 90 bp ACAGGCTCCAGCCGAGTGAATTCCTCCGCAAAGTTGCCCACATCCAGCTCTGAGGCTGGTAGAGGTGGGTaGACATCTCCCCGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: TGSSRVNSSAKLPTSSSEAGRGG*TSPRRS
Trigger: TGAGCGGCGGGGAGATGTTCACCCACCTCTACCAGC...CTCAGAGCTGGATGTGGGCAACTTTGCGGAGGAATTCACTCGGCTGGAGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR TCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTTCAGGTCTCGGTAAATaGTGCCGAGCTTGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSSGLGK*CRACAG
Trigger: ACCTGCACAAGCTCGGCATCATTTACCGAGACCTGA...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR TCA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGATCAGGTCTCGGTAAATaGTGCCGAGCTTGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGSGLGK*CRACAG
Trigger: ACCTGCACAAGCTCGGCATCATTTACCGAGACCTGA...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR TCA 90 bp AAGGTCCGCTCTTTCTCCTCCGTCAGGAACTCCTTGCTCAGCCCGAAGTCCGTGCGCGGATTTTGCACATaGTCTCGGCCGCCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: KVRSFSSVRNSLLSPKSVRGFCT*SRPPGS
Trigger: AGAGCCAGGCGGCCGAGATCATGTGCAAAATCCGCG...CACGGACTTCGGGCTGAGCAAGGAGTTCCTGACGGAGGAGAAAGAGCGGACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR TCA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAAGACAGTCCATAAAGTaGCAGTTGAGGGGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGRQSIK*QLRGAP
Trigger: AGGGGCACCCCTCAACTGTCACTTTATGGACTGTCT...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR GCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGGCACCAGGAACACCTTaGCGTAGGCTCCCGTGCCCA +
Preference number: 4 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQAPGTP*RRLPCP
Trigger: TGGGCACGGGAGCCTACGGCAAGGTGTTCCTGGTGC...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR GCA 90 bp AACAGGGTAGGGGGTCCCAGTTTAGGAGTTAGCACTCCTAACTCAGTGCTTAGAAGCTTCCCCGCGTCGTaGCCGCCCGCCTTCCGCACC +
Preference number: 4 (lower is better)
Translates to: NRVGGPSLGVSTPNSVLRSFPAS*PPAFRT
Trigger: GGTGCGGAAGGCGGGCGGGCACGACGCGGGGAAGCT...TCTAAGCACTGAGTTAGGAGTGCTAACTCCTAAACTGGGACCCCCTACCCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR GCA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAATTCCTCCGCAAAGTTaGCCACATCCAGCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGIPPQS*PHPALS
Trigger: GCTCAGAGCTGGATGTGGGCAACTTTGCGGAGGAAT...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR GCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTATTCCTCCGCAAAGTTaGCCACATCCAGCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSIPPQS*PHPALS
Trigger: GCTCAGAGCTGGATGTGGGCAACTTTGCGGAGGAAT...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR GCA 90 bp ACGAGGCTGCGCAGGATCTGGCTTGCTTCCGACTCGCTGAAGTGCCGCTTCTTGAGGTCCAGCTCGTACTaGTGGAAGAAGGGCGAGTCC +
Preference number: 4 (lower is better)
Translates to: TRLRRIWLASDSLKCRFLRSSSY*WKKGES
Trigger: GGACTCGCCCTTCTTCCAGCAGTACGAGCTGGACCT...CAAGAAGCGGCACTTCAGCGAGTCGGAAGCAAGCCAGATCCTGCGCAGCCTCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR GCA 90 bp GACACGAGGCTGCGCAGGATCTGGCTTGCTTCCGACTCGCTGAAGTGCCGCTTCACTGAGGATCTTGACTaGGAACTCCTGGCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: DTRLRRIWLASDSLKCRFTEDLD*ELLAAL
Trigger: CAGAGCGGCCAGGAGTTCGCAGTCAAGATCCTCAGT...GAAGCGGCACTTCAGCGAGTCGGAAGCAAGCCAGATCCTGCGCAGCCTCGTGTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR GCA 90 bp ACGAGGCTGCGCAGGATCTGGCTTGCTTCCGACTCGCTGAAGTGCCGCTTCTTGGCGCAGGATCTGGCTTaGTTCCGACTCGCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: TRLRRIWLASDSLKCRFLAQDLA*FRLAEV
Trigger: CACTTCAGCGAGTCGGAAGCAAGCCAGATCCTGCGC...CAAGAAGCGGCACTTCAGCGAGTCGGAAGCAAGCCAGATCCTGCGCAGCCTCGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CCA 90 bp TGCAGATTCACCACGTTGGGGTGTGACTGGCACAGGCGCAGGGCAGCCACTTCGCCCTGGAAGAAGGGATaGTTCCGGACTTCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: CRFTTLGCDWHRRRAATSPWKKG*FRTSCA
Trigger: GGCACAAGAAGTCCGGAACCATCCCTTCTTCCAGGG...CGAAGTGGCTGCCCTGCGCCTGTGCCAGTCACACCCCAACGTGGTGAATCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CCA 90 bp GTAGACAGGCTCCAGCCGAGTGAATTCCTCCGCAAAGTTGCCCACATCCAGCTCGGGCCGGAATGGGGCTaGAATCTTCCTGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: VDRLQPSEFLRKVAHIQLGPEWG*NLPGSQ
Trigger: CTGGCTGCCAGGAAGATTCCAGCCCCATTCCGGCCC...GAGCTGGATGTGGGCAACTTTGCGGAGGAATTCACTCGGCTGGAGCCTGTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CCA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCATCACCGCGTTGTTGTaGTCAAAGAGAATGGAGGGT +
Preference number: 4 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSITALL*SKRMEG
Trigger: ACCCTCCATTCTCTTTGACCACAACAACGCGGTGAT...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR CCA 90 bp CTCCCGCAGGTCCAGCTCGTACTGCTGGAAGAAGGGCGAGTCCTGCATCATAGCCTCGGACCAGCTCCTTaGCTTCCTCGGATACACCCT +
Preference number: 4 (lower is better)
Translates to: LPQVQLVLLEEGRVLHHSLGPAP*LPRIHP
Trigger: AGGGTGTATCCGAGGAAGCCAAGGAGCTGGTCCGAG...GCTATGATGCAGGACTCGCCCTTCTTCCAGCAGTACGAGCTGGACCTGCGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CCA 90 bp AACAGGGTAGGGGGTCCCAGTTTAGGAGTTAGCACTCCTAACTCAGTGCTTAGACCCGGCGGGAGGCGGTaGCGCTCCGCAGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: NRVGGPSLGVSTPNSVLRPGGRR*RSAASA
Trigger: AGCAGAAGCTGCGGAGCGCCACCGCCTCCCGCCGGG...TCTAAGCACTGAGTTAGGAGTGCTAACTCCTAAACTGGGACCCCCTACCCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR TCA 90 bp CAAAGTTGCCCACATCCAGCTCTGAGCGGATTTGGGGCCGGAATGGGGCTGGAAGCACCTCAGCCTCCTTaGAGTACTGGCGCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: QSCPHPALSGFGAGMGLEAPQPP*STGAGR
Trigger: TCTACCAGCGCCAGTACTTCAAGGAGGCTGAGGTGC...TTCCAGCCCCATTCCGGCCCCAAATCCGCTCAGAGCTGGATGTGGGCAACTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR TCA 90 bp AACAGGGTAGGGGGTCCCAGTTTAGGAGTTAGCACTCCTAACTCAGTGCTTAGAGGGGCTGCCAGGGGGTaGGTAGACAGGCTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: NRVGGPSLGVSTPNSVLRGAARG*VDRLQP
Trigger: CGGCTGGAGCCTGTCTACTCACCCCCTGGCAGCCCC...TCTAAGCACTGAGTTAGGAGTGCTAACTCCTAAACTGGGACCCCCTACCCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR TCA 90 bp AACAGGGTAGGGGGTCCCAGTTTAGGAGTTAGCACTCCTAACTCAGTGCTTAGAAGAGGCCTCCGGGAGTaGGCCGGGCTCCCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: NRVGGPSLGVSTPNSVLRRGLRE*AGLPGH
Trigger: GTGACCTGGGAGCCCGGCTCACTCCCGGAGGCCTCT...TCTAAGCACTGAGTTAGGAGTGCTAACTCCTAAACTGGGACCCCCTACCCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR TCA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCGCAGATGACATAAAGTaGGGCAGAAATGCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSADDIK*GRNASE
Trigger: CTCTGAAGCATTTCTGCCTCACTTTATGTCATCTGC...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR GCA 90 bp AACAGGGTAGGGGGTCCCAGTTTAGGAGTTAGCACTCCTAACTCAGTGCTTAGATGCGTCTTGGCGCGCTaGACCAGCGCCGCCTTGCGC +
Preference number: 4 (lower is better)
Translates to: NRVGGPSLGVSTPNSVLRCVLAR*TSAALR
Trigger: GCGCAAGGCGGCGCTGGTGCAGCGCGCCAAGACGCA...TCTAAGCACTGAGTTAGGAGTGCTAACTCCTAAACTGGGACCCCCTACCCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR GCA 90 bp AACAGGGTAGGGGGTCCCAGTTTAGGAGTTAGCACTCCTAACTCAGTGCTTAGACGCTGCAGCAGGTCCTaGGCCACGGGCCCGATCCGA +
Preference number: 4 (lower is better)
Translates to: NRVGGPSLGVSTPNSVLRRCSRS*ATGPIR
Trigger: TCGGATCGGGCCCGTGGCGCAGGACCTGCTGCAGCG...TCTAAGCACTGAGTTAGGAGTGCTAACTCCTAAACTGGGACCCCCTACCCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR GCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGTTACAAAGCAGCCGCTaGAGCAGGTCCTGCGCCACG +
Preference number: 4 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQLQSSR*SRSCAT
Trigger: CGTGGCGCAGGACCTGCTGCAGCGGCTGCTTTGTAA...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR GCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGGACACACAGAAAAGCTaGCCTGGCCCAGCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQDTQKS*PGPAQA
Trigger: AGCCTGCGCTGGGCCAGGGCAGCTTTTCTGTGTGTC...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR GCA 90 bp AAGGTCCGCTCTTTCTCCTCCGTCAGGAACTCCTTGCTCAGCCCGAAGTCCGTGTCCGACTCGCTGAAGTaGCGCTTCTTGCGGATGTGC +
Preference number: 4 (lower is better)
Translates to: KVRSFSSVRNSLLSPKSVSDSLK*RFLRMC
Trigger: GCACATCCGCAAGAAGCGGCACTTCAGCGAGTCGGA...CACGGACTTCGGGCTGAGCAAGGAGTTCCTGACGGAGGAGAAAGAGCGGACCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR GCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGCCCTGGAAGGGGACCTaGCCCGACAGCATCATGTAC +
Preference number: 4 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQPWKGT*PDSIMY
Trigger: GTACATGATGCTGTCGGGGCAGGTCCCCTTCCAGGG...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGTGCGCAGCACCTTCATaGCGTACAGCTTCCCCGCGT +
Preference number: 4 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQCAAPS*RTASPR
Trigger: ACGCGGGGAAGCTGTACGCCATGAAGGTGCTGCGCA...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGAGCTCTGAGCGGATTTaGGGCCGGAATGGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQSSERI*GRNGAG
Trigger: TCCAGCCCCATTCCGGCCCCAAATCCGCTCAGAGCT...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CCA 90 bp GTAGACAGGCTCCAGCCGAGTGAATTCCTCCGCAAAGTTGCCCACATCCAGCTCAGCTCTGAGCGGATTTaGGGCCGGAATGGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: VDRLQPSEFLRKVAHIQLSSERI*GRNGAG
Trigger: TCCAGCCCCATTCCGGCCCCAAATCCGCTCAGAGCT...GAGCTGGATGTGGGCAACTTTGCGGAGGAATTCACTCGGCTGGAGCCTGTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGAGGCTGCGCAGGATCTaGCTTGCTTCCGACTCGCTG +
Preference number: 4 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQRLRRI*LASDSL
Trigger: CAGCGAGTCGGAAGCAAGCCAGATCCTGCGCAGCCT...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CCA 90 bp CATCACCGCGTTGTTGTGGTCAAAGAGAATGGAGGGTGCCACAAAGGAGTATCCAGCAGGGCGTCTGCATaGGCACCCCGGGACTCTGCG +
Preference number: 4 (lower is better)
Translates to: HHRVVVVKENGGCHKGVSSRASA*APRDSA
Trigger: CGCAGAGTCCCGGGGTGCCCATGCAGACGCCCTGCT...GGATACTCCTTTGTGGCACCCTCCATTCTCTTTGACCACAACAACGCGGTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGTCTGCTTCCGCCGCTTaGCCAGGGGTGCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQSASAA*PGVHSP
Trigger: TGGAGAATGCACCCCTGGCCAAGCGGCGGAAGCAGA...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR TCA 90 bp CGAGTGAATTCCTCCGCAAAGTTGCCCACATCCAGCTCTGAGCGGATTTGGGGCGTGTGCAGCTGGTCGTaGTGCACCTCGTGCAGATTC +
Preference number: 4 (lower is better)
Translates to: RVNSSAKLPTSSSERIWGVCSWS*CTSCRF
Trigger: GAATCTGCACGAGGTGCATCACGACCAGCTGCACAC...GCCCCAAATCCGCTCAGAGCTGGATGTGGGCAACTTTGCGGAGGAATTCACTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR TCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGTTGCTTCCGACTCGCTaGAGTGCCGCTTCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQLLPTR*SAASCG
Trigger: TCCGCAAGAAGCGGCACTTCAGCGAGTCGGAAGCAA...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR TCA 90 bp CAAAGTTGCCCACATCCAGCTCTGAGCGGATTTGGGGCCGGAATGGGGCTGGAAGCATCATGTACAGAATaGCGCCCAGGCTCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: QSCPHPALSGFGAGMGLEASCTE*RPGSRG
Trigger: ACCTCTGGAGCCTGGGCGTCATTCTGTACATGATGC...TTCCAGCCCCATTCCGGCCCCAAATCCGCTCAGAGCTGGATGTGGGCAACTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR TCA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTCAGGGGAGAAGCAGATaGCATAAAGTGAGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSQGRSR*HKVRQK
Trigger: TTTCTGCCTCACTTTATGTCATCTGCTTCTCCCCTG...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR GCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGACCAGTCCACAGCCTTaGCATGCCCCGTCTTGCTAC +
Preference number: 4 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQTSPQP*HAPSCY
Trigger: GTAGCAAGACGGGGCATGGCAAGGCTGTGGACTGGT...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR GCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGGCGCAGGATCTGGCTTaGTTCCGACTCGCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQAQDLA*FRLAEV
Trigger: CACTTCAGCGAGTCGGAAGCAAGCCAGATCCTGCGC...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR GCA 90 bp CGAGTGAATTCCTCCGCAAAGTTGCCCACATCCAGCTCTGAGCGGATTTGGGGCGTAGGCTTCTCCTCGTaGCCGGTCAGGTTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: RVNSSAKLPTSSSERIWGVGFSS*PVRLAS
Trigger: AGAAGCCAACCTGACCGGGCACGAGGAGAAGCCTAC...GCCCCAAATCCGCTCAGAGCTGGATGTGGGCAACTTTGCGGAGGAATTCACTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CCA 90 bp AACAGGGTAGGGGGTCCCAGTTTAGGAGTTAGCACTCCTAACTCAGTGCTTAGAACTTCTTGTGCCCCCTaGGGCCCCGCGCCCAATCGC +
Preference number: 4 (lower is better)
Translates to: NRVGGPSLGVSTPNSVLRTSCAP*GPAPNR
Trigger: GCGATTGGGCGCGGGGCCCCAGGGGGCACAAGAAGT...TCTAAGCACTGAGTTAGGAGTGCTAACTCCTAAACTGGGACCCCCTACCCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGGATTTGGGGCCGGAATaGGGCTGGAATCTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQDLGPE*GWNLPG
Trigger: GCCAGGAAGATTCCAGCCCCATTCCGGCCCCAAATC...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CCA 90 bp GTAGACAGGCTCCAGCCGAGTGAATTCCTCCGCAAAGTTGCCCACATCCAGCTCGATTTGGGGCCGGAATaGGGCTGGAATCTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: VDRLQPSEFLRKVAHIQLDLGPE*GWNLPG
Trigger: GCCAGGAAGATTCCAGCCCCATTCCGGCCCCAAATC...GAGCTGGATGTGGGCAACTTTGCGGAGGAATTCACTCGGCTGGAGCCTGTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CCA 90 bp CATCACCGCGTTGTTGTGGTCAAAGAGAATGGAGGGTGCCACAAAGGAGTATCCTTGACTGCGAACTCCTaGCCGCTCTGGCGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: HHRVVVVKENGGCHKGVSLTANS*PLWRWR
Trigger: CCGCCAGCGCCAGAGCGGCCAGGAGTTCGCAGTCAA...GGATACTCCTTTGTGGCACCCTCCATTCTCTTTGACCACAACAACGCGGTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR CAA 72 bp CCAGGCGCTTCCAGCCCATCGGTCATCACCGCGTTGTaGTGGTCAAAGAGAATGGAGGGTGCCACAAAGGAG +
Preference number: 4 (lower is better)
Translates to: PGASSPSVITAL*WSKRMEGATKE
Trigger: CTCCTTTGTGGCACCCTCCATTCTCTTTGACCACAACAACGCGGTGATGACCGATGGGCTGGAAGCGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR CAA 72 bp GCACCAGGCGCTTCCAGCCCATCGGTCATCACCGCGTaGTTGTGGTCAAAGAGAATGGAGGGTGCCACAAAG +
Preference number: 4 (lower is better)
Translates to: APGASSPSVITA*LWSKRMEGATK
Trigger: CTTTGTGGCACCCTCCATTCTCTTTGACCACAACAACGCGGTGATGACCGATGGGCTGGAAGCGCCTGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
3UTR CAA 72 bp GCATTCTCCACGCTCTTCAGGAAGAAGCCCTCCCGCTaGCCCCGGTTGAATGCCATGAAGGTGGCGTTGAGA +
Preference number: 4 (lower is better)
Translates to: AFSTLFRKKPSR*PRLNAMKVALR
Trigger: TCTCAACGCCACCTTCATGGCATTCAACCGGGGCAAGCGGGAGGGCTTCTTCCTGAAGAGCGTGGAGAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR TCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGTCACATAGTCCAGGATaGGGTGCAGCTTGGCATCCG +
Preference number: 4 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQSHSPG*GAAWHP
Trigger: CGGATGCCAAGCTGCACCTCATCCTGGACTATGTGA...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR TCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGCCGTCTTGCTACGGATaGTTTCGGGGGCCATGTACT +
Preference number: 4 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQPSCYG*FRGPCT
Trigger: AGTACATGGCCCCCGAAATCATCCGTAGCAAGACGG...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR TCA 90 bp AACAGGGTAGGGGGTCCCAGTTTAGGAGTTAGCACTCCTAACTCAGTGCTTAGACCGCCTCCTCGTGCATaGAGCTCACGGCCGACACGA +
Preference number: 4 (lower is better)
Translates to: NRVGGPSLGVSTPNSVLRPPPRA*SSRPTR
Trigger: TCGTGTCGGCCGTGAGCTTCATGCACGAGGAGGCGG...TCTAAGCACTGAGTTAGGAGTGCTAACTCCTAAACTGGGACCCCCTACCCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR TCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGGCATCATGTACAGAATaGCGCCCAGGCTCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQASCTE*RPGSRG
Trigger: ACCTCTGGAGCCTGGGCGTCATTCTGTACATGATGC...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR TCA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGCAGATGACATAAAGTaGGGCAGAAATGCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGADDIK*GRNASE
Trigger: CTCTGAAGCATTTCTGCCTCACTTTATGTCATCTGC...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR GCA 90 bp TCCAGCCGAGTGAATTCCTCCGCAAAGTTGCCCACATCCAGCTCTGAGCGGATTGCTCGAAGAGCAAGATaGCCAGGCTCCACCAGTCCA +
Preference number: 4 (lower is better)
Translates to: SSRVNSSAKLPTSSSERIARRAR*PGSTSP
Trigger: TGGACTGGTGGAGCCTGGGCATCTTGCTCTTCGAGC...AATCCGCTCAGAGCTGGATGTGGGCAACTTTGCGGAGGAATTCACTCGGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR GCA 90 bp AACAGGGTAGGGGGTCCCAGTTTAGGAGTTAGCACTCCTAACTCAGTGCTTAGAGCAGCCACTTCGCGCTaGGTGTTCGCCTCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: NRVGGPSLGVSTPNSVLRAATSR*VFASSL
Trigger: CAGGCTGGAGGCGAACACGCAGCGCGAAGTGGCTGC...TCTAAGCACTGAGTTAGGAGTGCTAACTCCTAAACTGGGACCCCCTACCCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR GCA 90 bp AACAGGGTAGGGGGTCCCAGTTTAGGAGTTAGCACTCCTAACTCAGTGCTTAGAACGCCCGCCTCCTCGTaGATGAAGCTCACGGCCGAC +
Preference number: 4 (lower is better)
Translates to: NRVGGPSLGVSTPNSVLRTPASS*MKLTAD
Trigger: GTCGGCCGTGAGCTTCATGCACGAGGAGGCGGGCGT...TCTAAGCACTGAGTTAGGAGTGCTAACTCCTAAACTGGGACCCCCTACCCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR GCA 90 bp AACAGGGTAGGGGGTCCCAGTTTAGGAGTTAGCACTCCTAACTCAGTGCTTAGATCGGGGGCAGCGTACTaGAGCGTGAAGCAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: NRVGGPSLGVSTPNSVLRSGAAY*SVKQGV
Trigger: GACGCCCTGCTTCACGCTGCAGTACGCTGCCCCCGA...TCTAAGCACTGAGTTAGGAGTGCTAACTCCTAAACTGGGACCCCCTACCCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR GCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGGCACTCCTAACTCAGTaGTTAGAAGTGGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQALLTQ*LEVGEG
Trigger: CCCCTCCCCCACTTCTAAGCACTGAGTTAGGAGTGC...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CCA 90 bp TGCAGATTCACCACGTTGGGGTGTGACTGGCACAGGCGCAGGGCAGCCACTTCGTGTGGTCAAAGAGAATaGAGGGTGCCACAAAGGAGT +
Preference number: 4 (lower is better)
Translates to: CRFTTLGCDWHRRRAATSCGQRE*RVPQRS
Trigger: ACTCCTTTGTGGCACCCTCCATTCTCTTTGACCACA...CGAAGTGGCTGCCCTGCGCCTGTGCCAGTCACACCCCAACGTGGTGAATCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CCA 90 bp TCCAGCCGAGTGAATTCCTCCGCAAAGTTGCCCACATCCAGCTCTGAGCGGATTTCCAGCTCGTACTGCTaGAAGAAGGGCGAGTCCTGC +
Preference number: 4 (lower is better)
Translates to: SSRVNSSAKLPTSSSERISSSYC*KKGESC
Trigger: GCAGGACTCGCCCTTCTTCCAGCAGTACGAGCTGGA...AATCCGCTCAGAGCTGGATGTGGGCAACTTTGCGGAGGAATTCACTCGGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CCA 90 bp AACAGGGTAGGGGGTCCCAGTTTAGGAGTTAGCACTCCTAACTCAGTGCTTAGAACGTTGGGGTGTGACTaGCACAGGCGCAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: NRVGGPSLGVSTPNSVLRTLGCD*HRRRAA
Trigger: GGCTGCCCTGCGCCTGTGCCAGTCACACCCCAACGT...TCTAAGCACTGAGTTAGGAGTGCTAACTCCTAAACTGGGACCCCCTACCCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGGGGTGGGTGAGAAGATaGCCTCCTCTTTTAGGAGCC +
Preference number: 4 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQGWVRR*PPLLGA
Trigger: GGCTCCTAAAAGAGGAGGCCATCTTCTCACCCACCC...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR TCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGTCAGGTCTCGGTAAATaGTGCCGAGCTTGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQSGLGK*CRACAG
Trigger: ACCTGCACAAGCTCGGCATCATTTACCGAGACCTGA...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR TCA 90 bp AACAGGGTAGGGGGTCCCAGTTTAGGAGTTAGCACTCCTAACTCAGTGCTTAGATCAGCCCGAAGTCCGTaGGGACAATGTGGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: NRVGGPSLGVSTPNSVLRSARSP*GQCGPR
Trigger: CCGAGGGCCACATTGTCCTCACGGACTTCGGGCTGA...TCTAAGCACTGAGTTAGGAGTGCTAACTCCTAAACTGGGACCCCCTACCCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR TCA 90 bp AACAGGGTAGGGGGTCCCAGTTTAGGAGTTAGCACTCCTAACTCAGTGCTTAGACAGCGTACTGCAGCGTaGAGCAGGGCGTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: NRVGGPSLGVSTPNSVLRQRTAA*SRASAW
Trigger: CCATGCAGACGCCCTGCTTCACGCTGCAGTACGCTG...TCTAAGCACTGAGTTAGGAGTGCTAACTCCTAAACTGGGACCCCCTACCCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR GCA 90 bp AACAGGGTAGGGGGTCCCAGTTTAGGAGTTAGCACTCCTAACTCAGTGCTTAGACCTGGAGGGGCCTTCTaGCCAGAAGAGGCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: NRVGGPSLGVSTPNSVLRPGGAF*PEEAVS
Trigger: GGACACTGCCTCTTCTGGGCAGAAGGCCCCTCCAGG...TCTAAGCACTGAGTTAGGAGTGCTAACTCCTAAACTGGGACCCCCTACCCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CCA 90 bp AACAGGGTAGGGGGTCCCAGTTTAGGAGTTAGCACTCCTAACTCAGTGCTTAGAGGGGCTCTTTCCTGTTaGAGCAGTCCCCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: NRVGGPSLGVSTPNSVLRGALSC*SSPPGG
Trigger: CCCTCCAGGGGGACTGCTCCAACAGGAAAGAGCCCC...TCTAAGCACTGAGTTAGGAGTGCTAACTCCTAAACTGGGACCCCCTACCCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR TCA 90 bp AACAGGGTAGGGGGTCCCAGTTTAGGAGTTAGCACTCCTAACTCAGTGCTTAGACCGTGCCCAGCACCTTaGGCAGCTCGAAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: NRVGGPSLGVSTPNSVLRPCPAP*AARSSP
Trigger: TGGAGAACTTCGAGCTGCTCAAGGTGCTGGGCACGG...TCTAAGCACTGAGTTAGGAGTGCTAACTCCTAAACTGGGACCCCCTACCCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CCA 90 bp AACAGGGTAGGGGGTCCCAGTTTAGGAGTTAGCACTCCTAACTCAGTGCTTAGATGCGCAGCACCTTCATaGCGTACAGCTTCCCCGCGT +
Preference number: 4 (lower is better)
Translates to: NRVGGPSLGVSTPNSVLRCAAPS*RTASPR
Trigger: ACGCGGGGAAGCTGTACGCCATGAAGGTGCTGCGCA...TCTAAGCACTGAGTTAGGAGTGCTAACTCCTAAACTGGGACCCCCTACCCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CCA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGATGCCACACACAGCACTaGGTGGACTTTTATTTTAAA +
Preference number: 4 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGCHTQH*VDFYFK
Trigger: TTTAAAATAAAAGTCCACCCAGTGCTGTGTGTGGCA...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
3UTR CAA 72 bp CCAGGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTaGGTGGACGTAATTGCACAGACAGTCCATAAAGTG +
Preference number: 4 (lower is better)
Translates to: PGPLLQYPQHGS*VDVIAQTVHKV
Trigger: CACTTTATGGACTGTCTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR TCA 90 bp AACAGGGTAGGGGGTCCCAGTTTAGGAGTTAGCACTCCTAACTCAGTGCTTAGAGTGTGCAGCTGGTCGTaGTGCACCTCGTGCAGATTC +
Preference number: 4 (lower is better)
Translates to: NRVGGPSLGVSTPNSVLRVCSWS*CTSCRF
Trigger: GAATCTGCACGAGGTGCATCACGACCAGCTGCACAC...TCTAAGCACTGAGTTAGGAGTGCTAACTCCTAAACTGGGACCCCCTACCCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR TCA 90 bp AACAGGGTAGGGGGTCCCAGTTTAGGAGTTAGCACTCCTAACTCAGTGCTTAGATTGCTTCCGACTCGCTaGAGTGCCGCTTCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: NRVGGPSLGVSTPNSVLRLLPTR*SAASCG
Trigger: TCCGCAAGAAGCGGCACTTCAGCGAGTCGGAAGCAA...TCTAAGCACTGAGTTAGGAGTGCTAACTCCTAAACTGGGACCCCCTACCCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR TCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGCAGGGGAGAAGCAGATaGCATAAAGTGAGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQQGRSR*HKVRQK
Trigger: TTTCTGCCTCACTTTATGTCATCTGCTTCTCCCCTG...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR GCA 90 bp AACAGGGTAGGGGGTCCCAGTTTAGGAGTTAGCACTCCTAACTCAGTGCTTAGATCCACAGCCTTGCCATaGCCCGTCTTGCTACGGATG +
Preference number: 4 (lower is better)
Translates to: NRVGGPSLGVSTPNSVLRSTALP*PVLLRM
Trigger: CATCCGTAGCAAGACGGGGCATGGCAAGGCTGTGGA...TCTAAGCACTGAGTTAGGAGTGCTAACTCCTAAACTGGGACCCCCTACCCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR GCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGAAAGAGAATGGAGGGTaGCACAAAGGAGTATCCCTG +
Preference number: 4 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQKENGG*HKGVSL
Trigger: CAGGGATACTCCTTTGTGGCACCCTCCATTCTCTTT...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR GCA 90 bp CGAGTGAATTCCTCCGCAAAGTTGCCCACATCCAGCTCTGAGCGGATTTGGGGCAAAGAGAATGGAGGGTaGCACAAAGGAGTATCCCTG +
Preference number: 4 (lower is better)
Translates to: RVNSSAKLPTSSSERIWGKENGG*HKGVSL
Trigger: CAGGGATACTCCTTTGTGGCACCCTCCATTCTCTTT...GCCCCAAATCCGCTCAGAGCTGGATGTGGGCAACTTTGCGGAGGAATTCACTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR GCA 90 bp AACAGGGTAGGGGGTCCCAGTTTAGGAGTTAGCACTCCTAACTCAGTGCTTAGAAGGTCCAGCTCGTACTaGTGGAAGAAGGGCGAGTCC +
Preference number: 4 (lower is better)
Translates to: NRVGGPSLGVSTPNSVLRRSSSY*WKKGES
Trigger: GGACTCGCCCTTCTTCCAGCAGTACGAGCTGGACCT...TCTAAGCACTGAGTTAGGAGTGCTAACTCCTAAACTGGGACCCCCTACCCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334205.9
CDS-3UTR CCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGTGTGGTCAAAGAGAATaGAGGGTGCCACAAAGGAGT +
Preference number: 4 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQCGQRE*RVPQRS
Trigger: ACTCCTTTGTGGCACCCTCCATTCTCTTTGACCACA...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGATCACCGCGTTGTTGTaGTCAAAGAGAATGGAGGGT +
Preference number: 4 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQITALL*SKRMEG
Trigger: ACCCTCCATTCTCTTTGACCACAACAACGCGGTGAT...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CCA 90 bp AACAGGGTAGGGGGTCCCAGTTTAGGAGTTAGCACTCCTAACTCAGTGCTTAGATGTGGTCAAAGAGAATaGAGGGTGCCACAAAGGAGT +
Preference number: 4 (lower is better)
Translates to: NRVGGPSLGVSTPNSVLRCGQRE*RVPQRS
Trigger: ACTCCTTTGTGGCACCCTCCATTCTCTTTGACCACA...TCTAAGCACTGAGTTAGGAGTGCTAACTCCTAAACTGGGACCCCCTACCCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CCA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGACACACAGCACTGGGTaGACTTTTATTTTAAAGTCA +
Preference number: 4 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQTHSTG*TFILKS
Trigger: TGACTTTAAAATAAAAGTCCACCCAGTGCTGTGTGT...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS CCA 90 bp TCCGCAGCTCCACGGCGCAGCTCTCATCGTCGTCCTCGTCCCCCATaGCGGGCGGGTCGCTGGGGCCCGCGCGGCTCGGGCTCCGGGCGG +
Preference number: 5 (lower is better)
Translates to: SAAPRRSSHRRPRPP*RAGRWGPRGSGSGR
Trigger: CCGCCCGGAGCCCGAGCCGCGCGGGCCCCAGCGACCCGCCCGCCATGGGGGACGAGGACGACGATGAGAGCTGCGCCGTGGAGCTGCGGA
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
ENST00000530383.1
ENST00000531659.1
CDS CCA 90 bp GGCAGGAGGTCAGGGGCACCGCGCCTGGGACGCCTGCCCGGTGGATaGGGGTCCTCACCTCCCGTGCCCAGCACCTTGAGCAGCTCGAAG +
Preference number: 5 (lower is better)
Translates to: GRRSGAPRLGRLPGG*GSSPPVPSTLSSSK
Trigger: CTTCGAGCTGCTCAAGGTGCTGGGCACGGGAGGTGAGGACCCCCATCCACCGGGCAGGCGTCCCAGGCGCGGTGCCCCTGACCTCCTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530383.1
CDS CCA 90 bp AGCAGGCAGGAGGTCAGGGGCACCGCGCCTGGGACGCCTGCCCGGTaGATGGGGGTCCTCACCTCCCGTGCCCAGCACCTTGAGCAGCTC +
Preference number: 5 (lower is better)
Translates to: SRQEVRGTAPGTPAR*MGVLTSRAQHLEQL
Trigger: GAGCTGCTCAAGGTGCTGGGCACGGGAGGTGAGGACCCCCATCCACCGGGCAGGCGTCCCAGGCGCGGTGCCCCTGACCTCCTGCCTGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530383.1
CDS-3UTR CAA 90 bp CGGCGGGAGGCGGTGGCGCTCCGCAGCTTCTGCTTCCGCCGCTTGGCCAGGGGTGCCATGAAGGTGGCGTaGAGACCCGAGCGCACTGCG +
Preference number: 5 (lower is better)
Translates to: RREAVALRSFCFRRLARGAMKVA*RPERTA
Trigger: CGCAGTGCGCTCGGGTCTCAACGCCACCTTCATGGC...ACCCCTGGCCAAGCGGCGGAAGCAGAAGCTGCGGAGCGCCACCGCCTCCCGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS GCA 90 bp TGGCGCACCAGCTCCAGCACCGAGCGCTCGGTGCGCGTGTGCTCTTaGGTCTTGGCGCGCTGCACCAGCGCCGCCTTGCGCAGCACCTTC +
Preference number: 5 (lower is better)
Translates to: WRTSSSTERSVRVCS*VLARCTSAALRSTF
Trigger: GAAGGTGCTGCGCAAGGCGGCGCTGGTGCAGCGCGCCAAGACGCAAGAGCACACGCGCACCGAGCGCTCGGTGCTGGAGCTGGTGCGCCA
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
ENST00000530504.1
ENST00000531659.1
CDS GCA 90 bp CCTGGCCGCTCTGGCGCTGGCGGCAGCGGCGACACACAGAAAAGCTaGCCTGGCCCAGCGCAGGCTCCCGCAGGTCCAGCTCGTACTGCA +
Preference number: 5 (lower is better)
Translates to: PGRSGAGGSGDTQKS*PGPAQAPAGPARTA
Trigger: TGCAGTACGAGCTGGACCTGCGGGAGCCTGCGCTGGGCCAGGGCAGCTTTTCTGTGTGTCGCCGCTGCCGCCAGCGCCAGAGCGGCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528057.5
CDS CCA 90 bp CCAGCTCCAGCACCGAGCGCTCGGTGCGCGTGTGCTCTTGCGTCTTaGCGCGCTGCACCAGCGCCGCCTTGCGCAGCACCTTCATGGCGT +
Preference number: 5 (lower is better)
Translates to: PAPAPSARCACALAS*RAAPAPPCAAPSWR
Trigger: ACGCCATGAAGGTGCTGCGCAAGGCGGCGCTGGTGCAGCGCGCCAAGACGCAAGAGCACACGCGCACCGAGCGCTCGGTGCTGGAGCTGG
70% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
ENST00000530504.1
ENST00000531659.1
CDS CCA 90 bp CCGCTCTGGCGCTGGCGGCAGCGGCGACACACAGAAAAGCTGCCCTaGCCCAGCGCAGGCTCCCGCAGGTCCAGCTCGTACTGCTGCATC +
Preference number: 5 (lower is better)
Translates to: PLWRWRQRRHTEKLP*PSAGSRRSSSYCCI
Trigger: GATGCAGCAGTACGAGCTGGACCTGCGGGAGCCTGCGCTGGGCCAGGGCAGCTTTTCTGTGTGTCGCCGCTGCCGCCAGCGCCAGAGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530504.1
CDS GCA 90 bp CCGCAGGTCCAGCTCGTACTGCATCATAGCGCTCCTGGCCACCGCTaGCCGACCTGGCCGGTCTCCAGCACCAGGCGCTTCCAGCCCATC +
Preference number: 5 (lower is better)
Translates to: PQVQLVLHHSAPGHR*PTWPVSSTRRFQPI
Trigger: GATGGGCTGGAAGCGCCTGGTGCTGGAGACCGGCCAGGTCGGGCAGCGGTGGCCAGGAGCGCTATGATGCAGTACGAGCTGGACCTGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528057.5
CDS CCA 90 bp CCAGCCCACCTGCATCATAGCGCTCCTGGCCACCGCTGCCCGACCTaGCCGGTCTCCAGCACCAGGCGCTTCCAGCCCATCGGTCATCAC +
Preference number: 5 (lower is better)
Translates to: PAHLHHSAPGHRCPT*PVSSTRRFQPIGHH
Trigger: GTGATGACCGATGGGCTGGAAGCGCCTGGTGCTGGAGACCGGCCAGGTCGGGCAGCGGTGGCCAGGAGCGCTATGATGCAGGTGGGCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532885.5
CDS-3UTR CAA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCTCGAGCTTCAGCCGCTaGGCGGGGTCCACGGTCAGG +
Preference number: 5 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSSSFSR*AGSTVR
Trigger: CCTGACCGTGGACCCCGCCAAGCGGCTGAAGCTCGA...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR CAA 90 bp CCACGTTGGGGTGTGACTGGCACAGGCGCAGGGCAGCCACTTCGCGCTGCGTGTTCGAGCTTCAGCCGCTaGGCGGGGTCCACGGTCAGG +
Preference number: 5 (lower is better)
Translates to: PRWGVTGTGAGQPLRAACSSFSR*AGSTVR
Trigger: CCTGACCGTGGACCCCGCCAAGCGGCTGAAGCTCGA...ACACGCAGCGCGAAGTGGCTGCCCTGCGCCTGTGCCAGTCACACCCCAACGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS TCA 90 bp GCCTGCCCGGTGGATGGGGGTCCTCACCTCCCGTGCCCAGCACCTTaGGCAGCTCGAAGTTCTCCACGCTCACCTTCTCCTCGTGCCCGG +
Preference number: 5 (lower is better)
Translates to: ACPVDGGPHLPCPAP*AARSSPRSPSPRAR
Trigger: CCGGGCACGAGGAGAAGGTGAGCGTGGAGAACTTCGAGCTGCTCAAGGTGCTGGGCACGGGAGGTGAGGACCCCCATCCACCGGGCAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530383.1
CDS GCA 90 bp CAGGTCCAGCTCGTACTGCTGCATCATAGCGCTCCTGGCCACCGCTaGCCGACCTGGCCGGTCTCCAGCACCAGGCGCTTCCAGCCCATC +
Preference number: 5 (lower is better)
Translates to: QVQLVLLHHSAPGHR*PTWPVSSTRRFQPI
Trigger: GATGGGCTGGAAGCGCCTGGTGCTGGAGACCGGCCAGGTCGGGCAGCGGTGGCCAGGAGCGCTATGATGCAGCAGTACGAGCTGGACCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530504.1
CDS CCA 90 bp CCGCTCTGGCGCTGGCGGCAGCGGCGACACACAGAAAAGCTGCCCTaGCCCAGCGCAGGCTCCCGCAGGTCCAGCTCGTACTGCATCATA +
Preference number: 5 (lower is better)
Translates to: PLWRWRQRRHTEKLP*PSAGSRRSSSYCII
Trigger: TATGATGCAGTACGAGCTGGACCTGCGGGAGCCTGCGCTGGGCCAGGGCAGCTTTTCTGTGTGTCGCCGCTGCCGCCAGCGCCAGAGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528057.5
CDS-3UTR CAA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCCGCCCCTCGCGGATTTaGCACATGATCTCGGCCGCC +
Preference number: 5 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSRPSRI*HMISAA
Trigger: GGCGGCCGAGATCATGTGCAAAATCCGCGAGGGGCG...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS CCA 90 bp CAGCTCGTACTGCATCATAGCGCTCCTGGCCACCGCTGCCCGACCTaGCCGGTCTCCAGCACCAGGCGCTTCCAGCCCATCGGTCATCAC +
Preference number: 5 (lower is better)
Translates to: QLVLHHSAPGHRCPT*PVSSTRRFQPIGHH
Trigger: GTGATGACCGATGGGCTGGAAGCGCCTGGTGCTGGAGACCGGCCAGGTCGGGCAGCGGTGGCCAGGAGCGCTATGATGCAGTACGAGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528057.5
CDS CCA 90 bp CTCGTACTGCTGCATCATAGCGCTCCTGGCCACCGCTGCCCGACCTaGCCGGTCTCCAGCACCAGGCGCTTCCAGCCCATCGGTCATCAC +
Preference number: 5 (lower is better)
Translates to: LVLLHHSAPGHRCPT*PVSSTRRFQPIGHH
Trigger: GTGATGACCGATGGGCTGGAAGCGCCTGGTGCTGGAGACCGGCCAGGTCGGGCAGCGGTGGCCAGGAGCGCTATGATGCAGCAGTACGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530504.1
CDS-3UTR CAA 90 bp CCAGCACCGAGCGCTCGGTGCGCGTGTGCTCTTGCGTCTTGGCGCGCTGCACCATCCGTCAGGAACTCCTaGCTCAGCCCGAAGTCCGTG +
Preference number: 5 (lower is better)
Translates to: PAPSARCACALASWRAAPSVRNS*LSPKSV
Trigger: CACGGACTTCGGGCTGAGCAAGGAGTTCCTGACGGA...TGGTGCAGCGCGCCAAGACGCAAGAGCACACGCGCACCGAGCGCTCGGTGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CAA 90 bp CAGGCGCAGGGCAGCCACTTCGCGCTGCGTGTTCGCCTCCAGCCTGCGACTGAGCACCAGTCCACAGCCTaGCCATGCCCCGTCTTGCTA +
Preference number: 5 (lower is better)
Translates to: QAQGSHFALRVRLQPATEHQSTA*PCPVLL
Trigger: TAGCAAGACGGGGCATGGCAAGGCTGTGGACTGGTG...CTCAGTCGCAGGCTGGAGGCGAACACGCAGCGCGAAGTGGCTGCCCTGCGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CAA 90 bp AGGCGCAGGGCAGCCACTTCGCGCTGCGTGTTCGCCTCCAGCCTGCGACTGAGGCTGAAGTGCCGCTTCTaGCGGATGTGCTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: RRRAATSRCVFASSLRLRLKCRF*RMCSSS
Trigger: GCTGCTGGAGCACATCCGCAAGAAGCGGCACTTCAG...CCTCAGTCGCAGGCTGGAGGCGAACACGCAGCGCGAAGTGGCTGCCCTGCGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CAA 90 bp AGCAGCTCGGGGGCAGCGTACTGCAGCGTGAAGCAGGGCGTCTGCATGGGCACCCCTCGGACCAGCTCCTaGGCTTCCTCGGATACACCC +
Preference number: 5 (lower is better)
Translates to: SSSGAAYCSVKQGVCMGTPRTSS*ASSDTP
Trigger: GGGTGTATCCGAGGAAGCCAAGGAGCTGGTCCGAGG...GGTGCCCATGCAGACGCCCTGCTTCACGCTGCAGTACGCTGCCCCCGAGCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CAA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCTCCCGCTTGCCCCGGTaGAATGCCATGAAGGTGGCG +
Preference number: 5 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSSRLPR*NAMKVA
Trigger: CGCCACCTTCATGGCATTCAACCGGGGCAAGCGGGA...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS TCA 90 bp AGGTCCGAGACACCTCAGCCTGCGTGTTCCTCTCGCCCTCCAGGGTaGAGGGCGAGGCCCCCGTCAGCAGCTCGAAGAGCAAGATGCCCA +
Preference number: 5 (lower is better)
Translates to: RSETPQPACSSRPPG*RARPPSAARRARCP
Trigger: TGGGCATCTTGCTCTTCGAGCTGCTGACGGGGGCCTCGCCCTTCACCCTGGAGGGCGAGAGGAACACGCAGGCTGAGGTGTCTCGGACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532885.5
CDS-3UTR CAA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCCTGCGACTGAGGATCTaGACTGCGAACTCCTGGCCG +
Preference number: 5 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSLRLRI*TANSWP
Trigger: CGGCCAGGAGTTCGCAGTCAAGATCCTCAGTCGCAG...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR CAA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGCCATGAAGGTGGCGTaGAGACCCGAGCGCACTGCG +
Preference number: 5 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGAMKVA*RPERTA
Trigger: CGCAGTGCGCTCGGGTCTCAACGCCACCTTCATGGC...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR CAA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTCCTCGGACCAGCTCCTaGGCTTCCTCGGATACACCC +
Preference number: 5 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSPRTSS*ASSDTP
Trigger: GGGTGTATCCGAGGAAGCCAAGGAGCTGGTCCGAGG...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR CAA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTTCCCGCTTGCCCCGGTaGAATGCCATGAAGGTGGCG +
Preference number: 5 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSSRLPR*NAMKVA
Trigger: CGCCACCTTCATGGCATTCAACCGGGGCAAGCGGGA...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR CAA 90 bp TCCGACTCGCTGAAGTGCCGCTTCTTGCGGATGTGCTCCAGCAGCTCCCCGCCCAAGAAGCCCTCCCGCTaGCCCCGGTTGAATGCCATG +
Preference number: 5 (lower is better)
Translates to: SDSLKCRFLRMCSSSSPPKKPSR*PRLNAM
Trigger: CATGGCATTCAACCGGGGCAAGCGGGAGGGCTTCTT...GGGCGGGGAGCTGCTGGAGCACATCCGCAAGAAGCGGCACTTCAGCGAGTCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CAA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGATTCTGCTTCCGCCGCTaGGCCAGGGGTGCATTCTCC +
Preference number: 5 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGFCFRR*ARGAFS
Trigger: GGAGAATGCACCCCTGGCCAAGCGGCGGAAGCAGAA...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR CAA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAAGGGGCTCTTTCCTGTaGGAGCAGTCCCCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGRGSFL*EQSPWR
Trigger: CCTCCAGGGGGACTGCTCCAACAGGAAAGAGCCCCT...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CAA 90 bp CAAAGTTGCCCACATCCAGCTCTGAGCGGATTTGGGGCCGGAATGGGGCTGGAATGCACCAGCGCCGCCTaGCGCAGCACCTTCATGGCG +
Preference number: 5 (lower is better)
Translates to: QSCPHPALSGFGAGMGLECTSAA*RSTFMA
Trigger: CGCCATGAAGGTGCTGCGCAAGGCGGCGCTGGTGCA...TTCCAGCCCCATTCCGGCCCCAAATCCGCTCAGAGCTGGATGTGGGCAACTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CAA 90 bp AAGGTCCGCTCTTTCTCCTCCGTCAGGAACTCCTTGCTCAGCCCGAAGTCCGTGGTGTGCTCTTGCGTCTaGGCGCGCTGCACCAGCGCC +
Preference number: 5 (lower is better)
Translates to: KVRSFSSVRNSLLSPKSVVCSCV*ARCTSA
Trigger: GGCGCTGGTGCAGCGCGCCAAGACGCAAGAGCACAC...CACGGACTTCGGGCTGAGCAAGGAGTTCCTGACGGAGGAGAAAGAGCGGACCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CAA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGATCCGTCAGGAACTCCTaGCTCAGCCCGAAGTCCGTG +
Preference number: 5 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGSVRNS*LSPKSV
Trigger: CACGGACTTCGGGCTGAGCAAGGAGTTCCTGACGGA...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR CAA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGACACCAGTCCACAGCCTaGCCATGCCCCGTCTTGCTA +
Preference number: 5 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGHQSTA*PCPVLL
Trigger: TAGCAAGACGGGGCATGGCAAGGCTGTGGACTGGTG...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR CAA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGACTGAAGTGCCGCTTCTaGCGGATGTGCTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGLKCRF*RMCSSS
Trigger: GCTGCTGGAGCACATCCGCAAGAAGCGGCACTTCAG...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR CAA 90 bp GACACGAGGCTGCGCAGGATCTGGCTTGCTTCCGACTCGCTGAAGTGCCGCTTCTCCCGCTTGCCCCGGTaGAATGCCATGAAGGTGGCG +
Preference number: 5 (lower is better)
Translates to: DTRLRRIWLASDSLKCRFSRLPR*NAMKVA
Trigger: CGCCACCTTCATGGCATTCAACCGGGGCAAGCGGGA...GAAGCGGCACTTCAGCGAGTCGGAAGCAAGCCAGATCCTGCGCAGCCTCGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CAA 90 bp GACACGAGGCTGCGCAGGATCTGGCTTGCTTCCGACTCGCTGAAGTGCCGCTTCTTCTGCTTCCGCCGCTaGGCCAGGGGTGCATTCTCC +
Preference number: 5 (lower is better)
Translates to: DTRLRRIWLASDSLKCRFFCFRR*ARGAFS
Trigger: GGAGAATGCACCCCTGGCCAAGCGGCGGAAGCAGAA...GAAGCGGCACTTCAGCGAGTCGGAAGCAAGCCAGATCCTGCGCAGCCTCGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CAA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGGAAAGGACAGTCCCTaGGGGATCAGGTCAGCCGCA +
Preference number: 5 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGGKDSP*GIRSAA
Trigger: TGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCC...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR CAA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCCCCCAACACGGGTCTTaGGTGGACGTAATTGCACAG +
Preference number: 5 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSPQHGS*VDVIAQ
Trigger: CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGG...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS CCA 90 bp GGGGTATGCACGCACAGGACCGTGGAGGGAGGAGTGATGTCAATGTaGAGTGCCCTGGAAGTGGGCATGCAAACTCTGGCGAGGCAGGGC +
Preference number: 5 (lower is better)
Translates to: GVCTHRTVEGGVMSM*SALEVGMQTLARQG
Trigger: GCCCTGCCTCGCCAGAGTTTGCATGCCCACTTCCAGGGCACTCCACATTGACATCACTCCTCCCTCCACGGTCCTGTGCGTGCATACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530383.1
CDS-3UTR CAA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGTGCACCAGCGCCGCCTaGCGCAGCACCTTCATGGCG +
Preference number: 5 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQCTSAA*RSTFMA
Trigger: CGCCATGAAGGTGCTGCGCAAGGCGGCGCTGGTGCA...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CAA 90 bp AGGAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAAGGATGAGGTGCAGCTaGGCATCCGTCTGGAAAGCG +
Preference number: 5 (lower is better)
Translates to: RKGQSLGDQVSRRQRPPGRMRCS*ASVWKA
Trigger: CGCTTTCCAGACGGATGCCAAGCTGCACCTCATCCT...TCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR CAA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTTTGCCATGCCCCGTCTaGCTACGGATGATTTCGGGG +
Preference number: 5 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSLPCPV*LRMISG
Trigger: CCCCGAAATCATCCGTAGCAAGACGGGGCATGGCAA...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR CAA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGTCGAGCTTCAGCCGCTaGGCGGGGTCCACGGTCAGG +
Preference number: 5 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQSSFSR*AGSTVR
Trigger: CCTGACCGTGGACCCCGCCAAGCGGCTGAAGCTCGA...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CAA 90 bp GGGCTGGAATCTTCCTGGCAGCCAGAGCCACCCAATCGAGGCCCTGGAAGAAGGGGAAAGGACAGTCCCTaGGGGATCAGGTCAGCCGCA +
Preference number: 5 (lower is better)
Translates to: GLESSWQPEPPNRGPGRRGKDSP*GIRSAA
Trigger: TGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTCC...CCTTCTTCCAGGGCCTCGATTGGGTGGCTCTGGCTGCCAGGAAGATTCCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CAA 90 bp GGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTGAGCTCGGTCATCACCGCGTaGTTGTGGTCAAAGAGAATG +
Preference number: 5 (lower is better)
Translates to: GQSLGDQVSRRQRPPGVSSVITA*LWSKRM
Trigger: CATTCTCTTTGACCACAACAACGCGGTGATGACCGA...GCTCACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
CDS-3UTR CAA 90 bp TGGCGCACCAGCTCCAGCACCGAGCGCTCGGTGCGCGTGTGCTCTTGCGTCTTGTCGGTCATCACCGCGTaGTTGTGGTCAAAGAGAATG +
Preference number: 5 (lower is better)
Translates to: WRTSSSTERSVRVCSCVLSVITA*LWSKRM
Trigger: CATTCTCTTTGACCACAACAACGCGGTGATGACCGA...CAAGACGCAAGAGCACACGCGCACCGAGCGCTCGGTGCTGGAGCTGGTGCGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CAA 90 bp ACAGGCTCCAGCCGAGTGAATTCCTCCGCAAAGTTGCCCACATCCAGCTCTGAGCGCCCCTCGCGGATTTaGCACATGATCTCGGCCGCC +
Preference number: 5 (lower is better)
Translates to: TGSSRVNSSAKLPTSSSERPSRI*HMISAA
Trigger: GGCGGCCGAGATCATGTGCAAAATCCGCGAGGGGCG...CTCAGAGCTGGATGTGGGCAACTTTGCGGAGGAATTCACTCGGCTGGAGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CAA 90 bp GAAAGGACAGTCCCTTGGGGATCAGGTCAGCCGCAGGCAGAGGCCTCCGGGAGTCCCCAACACGGGTCTTaGGTGGACGTAATTGCACAG +
Preference number: 5 (lower is better)
Translates to: ERTVPWGSGQPQAEASGSPQHGS*VDVIAQ
Trigger: CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGG...ACTCCCGGAGGCCTCTGCCTGCGGCTGACCTGATCCCCAAGGGACTGTCCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CAA 90 bp CAAAGTTGCCCACATCCAGCTCTGAGCGGATTTGGGGCCGGAATGGGGCTGGAACTGCGACTGAGGATCTaGACTGCGAACTCCTGGCCG +
Preference number: 5 (lower is better)
Translates to: QSCPHPALSGFGAGMGLELRLRI*TANSWP
Trigger: CGGCCAGGAGTTCGCAGTCAAGATCCTCAGTCGCAG...TTCCAGCCCCATTCCGGCCCCAAATCCGCTCAGAGCTGGATGTGGGCAACTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CAA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGCCTCGGACCAGCTCCTaGGCTTCCTCGGATACACCC +
Preference number: 5 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQPRTSS*ASSDTP
Trigger: GGGTGTATCCGAGGAAGCCAAGGAGCTGGTCCGAGG...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CAA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGCTGCGACTGAGGATCTaGACTGCGAACTCCTGGCCG +
Preference number: 5 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQLRLRI*TANSWP
Trigger: CGGCCAGGAGTTCGCAGTCAAGATCCTCAGTCGCAG...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CAA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGCTGAAGTGCCGCTTCTaGCGGATGTGCTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQLKCRF*RMCSSS
Trigger: GCTGCTGGAGCACATCCGCAAGAAGCGGCACTTCAG...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CAA 90 bp AACAGGGTAGGGGGTCCCAGTTTAGGAGTTAGCACTCCTAACTCAGTGCTTAGAGGTGCGCGTGTGCTCTaGCGTCTTGGCGCGCTGCAC +
Preference number: 5 (lower is better)
Translates to: NRVGGPSLGVSTPNSVLRGARVL*RLGALH
Trigger: GTGCAGCGCGCCAAGACGCAAGAGCACACGCGCACC...TCTAAGCACTGAGTTAGGAGTGCTAACTCCTAAACTGGGACCCCCTACCCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CAA 90 bp ACAGGCTCCAGCCGAGTGAATTCCTCCGCAAAGTTGCCCACATCCAGCTCTGAGAGGATGAGGTGCAGCTaGGCATCCGTCTGGAAAGCG +
Preference number: 5 (lower is better)
Translates to: TGSSRVNSSAKLPTSSSERMRCS*ASVWKA
Trigger: CGCTTTCCAGACGGATGCCAAGCTGCACCTCATCCT...CTCAGAGCTGGATGTGGGCAACTTTGCGGAGGAATTCACTCGGCTGGAGCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CAA 90 bp TCCAGCCGAGTGAATTCCTCCGCAAAGTTGCCCACATCCAGCTCTGAGCGGATTTTGCCATGCCCCGTCTaGCTACGGATGATTTCGGGG +
Preference number: 5 (lower is better)
Translates to: SSRVNSSAKLPTSSSERILPCPV*LRMISG
Trigger: CCCCGAAATCATCCGTAGCAAGACGGGGCATGGCAA...AATCCGCTCAGAGCTGGATGTGGGCAACTTTGCGGAGGAATTCACTCGGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CAA 90 bp AACAGGGTAGGGGGTCCCAGTTTAGGAGTTAGCACTCCTAACTCAGTGCTTAGAGCCATGAAGGTGGCGTaGAGACCCGAGCGCACTGCG +
Preference number: 5 (lower is better)
Translates to: NRVGGPSLGVSTPNSVLRAMKVA*RPERTA
Trigger: CGCAGTGCGCTCGGGTCTCAACGCCACCTTCATGGC...TCTAAGCACTGAGTTAGGAGTGCTAACTCCTAAACTGGGACCCCCTACCCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CAA 90 bp AACAGGGTAGGGGGTCCCAGTTTAGGAGTTAGCACTCCTAACTCAGTGCTTAGATTCTGCTTCCGCCGCTaGGCCAGGGGTGCATTCTCC +
Preference number: 5 (lower is better)
Translates to: NRVGGPSLGVSTPNSVLRFCFRR*ARGAFS
Trigger: GGAGAATGCACCCCTGGCCAAGCGGCGGAAGCAGAA...TCTAAGCACTGAGTTAGGAGTGCTAACTCCTAAACTGGGACCCCCTACCCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CAA 90 bp AACAGGGTAGGGGGTCCCAGTTTAGGAGTTAGCACTCCTAACTCAGTGCTTAGAAGGGGCTCTTTCCTGTaGGAGCAGTCCCCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: NRVGGPSLGVSTPNSVLRRGSFL*EQSPWR
Trigger: CCTCCAGGGGGACTGCTCCAACAGGAAAGAGCCCCT...TCTAAGCACTGAGTTAGGAGTGCTAACTCCTAAACTGGGACCCCCTACCCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CAA 90 bp AACAGGGTAGGGGGTCCCAGTTTAGGAGTTAGCACTCCTAACTCAGTGCTTAGATCCGTCAGGAACTCCTaGCTCAGCCCGAAGTCCGTG +
Preference number: 5 (lower is better)
Translates to: NRVGGPSLGVSTPNSVLRSVRNS*LSPKSV
Trigger: CACGGACTTCGGGCTGAGCAAGGAGTTCCTGACGGA...TCTAAGCACTGAGTTAGGAGTGCTAACTCCTAAACTGGGACCCCCTACCCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CAA 90 bp AACAGGGTAGGGGGTCCCAGTTTAGGAGTTAGCACTCCTAACTCAGTGCTTAGACACCAGTCCACAGCCTaGCCATGCCCCGTCTTGCTA +
Preference number: 5 (lower is better)
Translates to: NRVGGPSLGVSTPNSVLRHQSTA*PCPVLL
Trigger: TAGCAAGACGGGGCATGGCAAGGCTGTGGACTGGTG...TCTAAGCACTGAGTTAGGAGTGCTAACTCCTAAACTGGGACCCCCTACCCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CAA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGGTCATCACCGCGTTGTaGTGGTCAAAGAGAATGGAG +
Preference number: 5 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQVITAL*WSKRME
Trigger: CTCCATTCTCTTTGACCACAACAACGCGGTGATGAC...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CAA 90 bp ACAGGCTCCAGCCGAGTGAATTCCTCCGCAAAGTTGCCCACATCCAGCTCTGAGGTCATCACCGCGTTGTaGTGGTCAAAGAGAATGGAG +
Preference number: 5 (lower is better)
Translates to: TGSSRVNSSAKLPTSSSEVITAL*WSKRME
Trigger: CTCCATTCTCTTTGACCACAACAACGCGGTGATGAC...CTCAGAGCTGGATGTGGGCAACTTTGCGGAGGAATTCACTCGGCTGGAGCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528355.5
CDS-3UTR CAA 90 bp GGGCCTCTCCTTCAGTACCCCCAACACGGGTCTTTGGTGGACGTAATTGCACAGTCGGTCATCACCGCGTaGTTGTGGTCAAAGAGAATG +
Preference number: 5 (lower is better)
Translates to: GPLLQYPQHGSLVDVIAQSVITA*LWSKRM
Trigger: CATTCTCTTTGACCACAACAACGCGGTGATGACCGA...CTGTGCAATTACGTCCACCAAAGACCCGTGTTGGGGGTACTGAAGGAGAGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CAA 90 bp AACAGGGTAGGGGGTCCCAGTTTAGGAGTTAGCACTCCTAACTCAGTGCTTAGAAAGAAGCCCTCCCGCTaGCCCCGGTTGAATGCCATG +
Preference number: 5 (lower is better)
Translates to: NRVGGPSLGVSTPNSVLRKKPSR*PRLNAM
Trigger: CATGGCATTCAACCGGGGCAAGCGGGAGGGCTTCTT...TCTAAGCACTGAGTTAGGAGTGCTAACTCCTAAACTGGGACCCCCTACCCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CAA 90 bp AACAGGGTAGGGGGTCCCAGTTTAGGAGTTAGCACTCCTAACTCAGTGCTTAGATTGCCATGCCCCGTCTaGCTACGGATGATTTCGGGG +
Preference number: 5 (lower is better)
Translates to: NRVGGPSLGVSTPNSVLRLPCPV*LRMISG
Trigger: CCCCGAAATCATCCGTAGCAAGACGGGGCATGGCAA...TCTAAGCACTGAGTTAGGAGTGCTAACTCCTAAACTGGGACCCCCTACCCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS-3UTR CAA 90 bp AACAGGGTAGGGGGTCCCAGTTTAGGAGTTAGCACTCCTAACTCAGTGCTTAGAGTCATCACCGCGTTGTaGTGGTCAAAGAGAATGGAG +
Preference number: 5 (lower is better)
Translates to: NRVGGPSLGVSTPNSVLRVITAL*WSKRME
Trigger: CTCCATTCTCTTTGACCACAACAACGCGGTGATGAC...TCTAAGCACTGAGTTAGGAGTGCTAACTCCTAAACTGGGACCCCCTACCCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334205.9
ENST00000528057.5
CDS GCA 72 bp CAGGCAGGAGGTCAGGGGCACCGCGCCTGGGACGCCTaGCCGGTGGATGGGGGTCCTCACCTCCCGTGCCCA +
Preference number: 6 (lower is better)
Translates to: QAGGQGHRAWDA*PVDGGPHLPCP
Trigger: TGGGCACGGGAGGTGAGGACCCCCATCCACCGGGCAGGCGTCCCAGGCGCGGTGCCCCTGACCTCCTGCCTG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530383.1
CDS CAA 90 bp CTGGCGCACCAGCTCCAGCACCGAGCGCTCGGTGCGCGTGTGCTCTaGCGTCTTGGCGCGCTGCACCAGCGCCGCCTTGCGCAGCACCTT +
Preference number: 6 (lower is better)
Translates to: LAHQLQHRALGARVL*RLGALHQRRLAQHL
Trigger: AAGGTGCTGCGCAAGGCGGCGCTGGTGCAGCGCGCCAAGACGCAAGAGCACACGCGCACCGAGCGCTCGGTGCTGGAGCTGGTGCGCCAG
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
ENST00000530504.1
ENST00000531659.1
CDS GCA 72 bp CGCTCGGTGCGCGTGTGCTCTTGCGTCTTGGCGCGCTaGACCAGCGCCGCCTTGCGCAGCACCTTCATGGCG +
Preference number: 6 (lower is better)
Translates to: RSVRVCSCVLAR*TSAALRSTFMA
Trigger: CGCCATGAAGGTGCTGCGCAAGGCGGCGCTGGTGCAGCGCGCCAAGACGCAAGAGCACACGCGCACCGAGCG
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
ENST00000530504.1
ENST00000531659.1
CDS GCA 72 bp CCAGCCCACCTGCATCATAGCGCTCCTGGCCACCGCTaGCCGACCTGGCCGGTCTCCAGCACCAGGCGCTTC +
Preference number: 6 (lower is better)
Translates to: PAHLHHSAPGHR*PTWPVSSTRRF
Trigger: GAAGCGCCTGGTGCTGGAGACCGGCCAGGTCGGGCAGCGGTGGCCAGGAGCGCTATGATGCAGGTGGGCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532885.5
CDS CAA 90 bp ACCAGCTCCAGCACCGAGCGCTCGGTGCGCGTGTGCTCTTGCGTCTaGGCGCGCTGCACCAGCGCCGCCTTGCGCAGCACCTTCATGGCG +
Preference number: 6 (lower is better)
Translates to: TSSSTERSVRVCSCV*ARCTSAALRSTFMA
Trigger: CGCCATGAAGGTGCTGCGCAAGGCGGCGCTGGTGCAGCGCGCCAAGACGCAAGAGCACACGCGCACCGAGCGCTCGGTGCTGGAGCTGGT
70% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000528355.5
ENST00000530504.1
ENST00000531659.1
CDS GCA 72 bp CAGCTCGTACTGCATCATAGCGCTCCTGGCCACCGCTaGCCGACCTGGCCGGTCTCCAGCACCAGGCGCTTC +
Preference number: 6 (lower is better)
Translates to: QLVLHHSAPGHR*PTWPVSSTRRF
Trigger: GAAGCGCCTGGTGCTGGAGACCGGCCAGGTCGGGCAGCGGTGGCCAGGAGCGCTATGATGCAGTACGAGCTG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528057.5
CDS GCA 72 bp CTCGTACTGCTGCATCATAGCGCTCCTGGCCACCGCTaGCCGACCTGGCCGGTCTCCAGCACCAGGCGCTTC +
Preference number: 6 (lower is better)
Translates to: LVLLHHSAPGHR*PTWPVSSTRRF
Trigger: GAAGCGCCTGGTGCTGGAGACCGGCCAGGTCGGGCAGCGGTGGCCAGGAGCGCTATGATGCAGCAGTACGAG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530504.1
CDS GCA 72 bp AAGCAGCCGCTGCAGCAGGTCCGAGACACCTCAGCCTaGGTGTTCCTCTCGCCCTCCAGGGTGAAGGGCGAG +
Preference number: 6 (lower is better)
Translates to: KQPLQQVRDTSA*VFLSPSRVKGE
Trigger: CTCGCCCTTCACCCTGGAGGGCGAGAGGAACACGCAGGCTGAGGTGTCTCGGACCTGCTGCAGCGGCTGCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532885.5
CDS CAA 72 bp GCCCCGCCACGCCCCATGTCGGAGAGGCTTAGGACCTaGCTGAGCTCACGCTGCGGGCGCCAGTTGGATCTA +
Preference number: 6 (lower is better)
Translates to: APPRPMSERLRT*LSSRCGRQLDL
Trigger: TAGATCCAACTGGCGCCCGCAGCGTGAGCTCAGCAAGGTCCTAAGCCTCTCCGACATGGGGCGTGGCGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532885.5
CDS CAA 72 bp CTTAGGACCTTGCTGAGCTCACGCTGCGGGCGCCAGTaGGATCTAGGCCTAGAGTCCCCGGGCCTAGGCCTC +
Preference number: 6 (lower is better)
Translates to: LRTLLSSRCGRQ*DLGLESPGLGL
Trigger: GAGGCCTAGGCCCGGGGACTCTAGGCCTAGATCCAACTGGCGCCCGCAGCGTGAGCTCAGCAAGGTCCTAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532885.5
CDS TCA 72 bp GTGGATGGGGGTCCTCACCTCCCGTGCCCAGCACCTTaGGCAGCTCGAAGTTCTCCACGCTCACCTTCTCCT +
Preference number: 6 (lower is better)
Translates to: VDGGPHLPCPAP*AARSSPRSPSP
Trigger: AGGAGAAGGTGAGCGTGGAGAACTTCGAGCTGCTCAAGGTGCTGGGCACGGGAGGTGAGGACCCCCATCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530383.1
CDS GCA 72 bp ATGTCGGAGAGGCTTAGGACCTTGCTGAGCTCACGCTaGGGGCGCCAGTTGGATCTAGGCCTAGAGTCCCCG +
Preference number: 6 (lower is better)
Translates to: MSERLRTLLSSR*GRQLDLGLESP
Trigger: CGGGGACTCTAGGCCTAGATCCAACTGGCGCCCGCAGCGTGAGCTCAGCAAGGTCCTAAGCCTCTCCGACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532885.5
CDS TCA 72 bp GGAACACCTTGCCGTAGGCTCCCGTGCCCAGCACCTTaGGCAGCTCGAAGTTCTCCACGCTCACCTTCTCCT +
Preference number: 6 (lower is better)
Translates to: GTPCRRLPCPAP*AARSSPRSPSP
Trigger: AGGAGAAGGTGAGCGTGGAGAACTTCGAGCTGCTCAAGGTGCTGGGCACGGGAGCCTACGGCAAGGTGTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334205.9
ENST00000528057.5
ENST00000530504.1
ENST00000531659.1
CDS CCA 72 bp ACGCACAGGACCGTGGAGGGAGGAGTGATGTCAATGTaGAGTGCCCTGGAAGTGGGCATGCAAACTCTGGCG +
Preference number: 6 (lower is better)
Translates to: THRTVEGGVMSM*SALEVGMQTLA
Trigger: CGCCAGAGTTTGCATGCCCACTTCCAGGGCACTCCACATTGACATCACTCCTCCCTCCACGGTCCTGTGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530383.1