Pregenerated sensors for RPS6KA2-IT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000232082Ensembl transcript IDs: ENST00000416770.1
Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCTCATGGCCGTGCAGCTCTGCTGGAGGCTGCTGCGTTCTCACTCTaGTCTGGGCCAGGCAGTGAGGTTCTGTGCGGGCCGCCGGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PHGRAALLEAAAFSL*SGPGSEVLCGPPVA Trigger: GGCCACCGGCGGCCCGCACAGAACCTCACTGCCTGGCCCAGACCAGAGTGAGAACGCAGCAGCCTCCAGCAGAGCTGCACGGCCATGAGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416770.1 |
||
| CDS CCA 90 bp | TCTGGGCCAGGCAGTGAGGTTCTGTGCGGGCCGCCGGTGGCCAACTaGAGCCGGTCACTCTGGCCCTTTGGACGGCTTCCTCGAGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SGPGSEVLCGPPVAN*SRSLWPFGRLPRGL Trigger: CAAGCCTCGAGGAAGCCGTCCAAAGGGCCAGAGTGACCGGCTCCAGTTGGCCACCGGCGGCCCGCACAGAACCTCACTGCCTGGCCCAGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416770.1 |
||
| CDS CCA 90 bp | CACTCTGGTCTGGGCCAGGCAGTGAGGTTCTGTGCGGGCCGCCGGTaGCCAACTGGAGCCGGTCACTCTGGCCCTTTGGACGGCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: HSGLGQAVRFCAGRR*PTGAGHSGPLDGFL Trigger: GAGGAAGCCGTCCAAAGGGCCAGAGTGACCGGCTCCAGTTGGCCACCGGCGGCCCGCACAGAACCTCACTGCCTGGCCCAGACCAGAGTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416770.1 |
||
| CDS TCA 90 bp | TCTGCTGGAGGCTGCTGCGTTCTCACTCTGGTCTGGGCCAGGCAGTaGGGTTCTGTGCGGGCCGCCGGTGGCCAACTGGAGCCGGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: SAGGCCVLTLVWARQ*GSVRAAGGQLEPVT Trigger: AGTGACCGGCTCCAGTTGGCCACCGGCGGCCCGCACAGAACCTCACTGCCTGGCCCAGACCAGAGTGAGAACGCAGCAGCCTCCAGCAGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416770.1 |
||
| CDS GCA 90 bp | GCTGCTGCGTTCTCACTCTGGTCTGGGCCAGGCAGTGAGGTTCTGTaGGGGCCGCCGGTGGCCAACTGGAGCCGGTCACTCTGGCCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: AAAFSLWSGPGSEVL*GPPVANWSRSLWPF Trigger: AAAGGGCCAGAGTGACCGGCTCCAGTTGGCCACCGGCGGCCCGCACAGAACCTCACTGCCTGGCCCAGACCAGAGTGAGAACGCAGCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416770.1 |
||
| CDS TCA 90 bp | CGCAGAAAACATCCAGCCTGGAGTCCTGTCCTGGGCACTTGTGTGTaGCCATCTAGAGCTCAGTTCTGGACTCAGGGACCCTCATGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RRKHPAWSPVLGTCV*PSRAQFWTQGPSWP Trigger: CGGCCATGAGGGTCCCTGAGTCCAGAACTGAGCTCTAGATGGTCACACACAAGTGCCCAGGACAGGACTCCAGGCTGGATGTTTTCTGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416770.1 |
||
| CDS CCA 90 bp | GTCCCCACGGTGTTCGCAGAAAACATCCAGCCTGGAGTCCTGTCCTaGGCACTTGTGTGTGACCATCTAGAGCTCAGTTCTGGACTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VPTVFAENIQPGVLS*ALVCDHLELSSGLR Trigger: CCTGAGTCCAGAACTGAGCTCTAGATGGTCACACACAAGTGCCCAGGACAGGACTCCAGGCTGGATGTTTTCTGCGAACACCGTGGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000416770.1 |
||
| CDS TCA 90 bp | CTGGGACAATTCATGCCGAAACCGACGAGAGAAAATGCAGTCTCATaGTCAAATTCGCCAGGCACATTTAAAATCATCTCATTTGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LGQFMPKPTRENAVS*SNSPGTFKIISFVP Trigger: TGGGACAAATGAGATGATTTTAAATGTGCCTGGCGAATTTGATCATGAGACTGCATTTTCTCTCGTCGGTTTCGGCATGAATTGTCCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000416770.1 |
||
| CDS TCA 72 bp | GGCTGCTGCGTTCTCACTCTGGTCTGGGCCAGGCAGTaGGGTTCTGTGCGGGCCGCCGGTGGCCAACTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GCCVLTLVWARQ*GSVRAAGGQLE Trigger: CTCCAGTTGGCCACCGGCGGCCCGCACAGAACCTCACTGCCTGGCCCAGACCAGAGTGAGAACGCAGCAGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416770.1 |
||
| CDS CCA 72 bp | GGCAGTGAGGTTCTGTGCGGGCCGCCGGTGGCCAACTaGAGCCGGTCACTCTGGCCCTTTGGACGGCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GSEVLCGPPVAN*SRSLWPFGRLP Trigger: AGGAAGCCGTCCAAAGGGCCAGAGTGACCGGCTCCAGTTGGCCACCGGCGGCCCGCACAGAACCTCACTGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416770.1 |
||
| CDS CAA 90 bp | TGTGCGGGCCGCCGGTGGCCAACTGGAGCCGGTCACTCTGGCCCTTaGGACGGCTTCCTCGAGGCTTGCTGCAATCTTAAAGGCCGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: CAGRRWPTGAGHSGP*DGFLEACCNLKGRS Trigger: TGACCGGCCTTTAAGATTGCAGCAAGCCTCGAGGAAGCCGTCCAAAGGGCCAGAGTGACCGGCTCCAGTTGGCCACCGGCGGCCCGCACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416770.1 |
||
| CDS CAA 72 bp | CGCCGGTGGCCAACTGGAGCCGGTCACTCTGGCCCTTaGGACGGCTTCCTCGAGGCTTGCTGCAATCTTAAA | + |
|
Preference number: 6 (lower is better) Translates to: RRWPTGAGHSGP*DGFLEACCNLK Trigger: TTTAAGATTGCAGCAAGCCTCGAGGAAGCCGTCCAAAGGGCCAGAGTGACCGGCTCCAGTTGGCCACCGGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416770.1 |
||
| CDS TCA 72 bp | CATCCAGCCTGGAGTCCTGTCCTGGGCACTTGTGTGTaGCCATCTAGAGCTCAGTTCTGGACTCAGGGACCC | + |
|
Preference number: 6 (lower is better) Translates to: HPAWSPVLGTCV*PSRAQFWTQGP Trigger: GGGTCCCTGAGTCCAGAACTGAGCTCTAGATGGTCACACACAAGTGCCCAGGACAGGACTCCAGGCTGGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416770.1 |
||
| CDS CAA 90 bp | CAGTCTCATGATCAAATTCGCCAGGCACATTTAAAATCATCTCATTaGTCCCAGGATGTCAGAATGACACAGTGTGGCCGCAGGGCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: QSHDQIRQAHLKSSH*SQDVRMTQCGRRAL Trigger: TAAAGCCCTGCGGCCACACTGTGTCATTCTGACATCCTGGGACAAATGAGATGATTTTAAATGTGCCTGGCGAATTTGATCATGAGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416770.1 |
||