Pregenerated sensors for RPS6 (Homo sapiens)
Ensembl gene IDs: ENSG00000137154Ensembl transcript IDs: ENST00000315377.4, ENST00000380381.3, ENST00000380384.5, ENST00000380394.9
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GATACAACCCTTTTTGGCACTTTGGGGATTATGAGGACAGCTATGTaGCATATTGCCAAATGCATGATGCAGGGCAAGAATTATGTTGAT | + |
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Preference number: 1 (lower is better) Translates to: DTTLFGTLGIMRTAM*HIAKCMMQGKNYVD Trigger: ATCAACATAATTCTTGCCCTGCATCATGCATTTGGCAATATGTCACATAGCTGTCCTCATAATCCCCAAAGTGCCAAAAAGGGTTGTATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000380381.3 |
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| 3UTR TCA 90 bp | TATGTGACATATTGCCAAATGCATGATGCAGGGCAAGAATTATGTTaGTGTAAACTTTACGTATATTTTATGGCTTACTCTACGTCCCCC | + |
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Preference number: 1 (lower is better) Translates to: YVTYCQMHDAGQELC*CKLYVYFMAYSTSP Trigger: GGGGGACGTAGAGTAAGCCATAAAATATACGTAAAGTTTACATCAACATAATTCTTGCCCTGCATCATGCATTTGGCAATATGTCACATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380381.3 |
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| 3UTR CAA 90 bp | TTCCTGTGCCACCCATCCCCTGAAAGGAACCCCTGTACACTGACCTaGTCTTCCACTACCACACACAATAGGTCTGACTTTATCCACCAT | + |
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Preference number: 2 (lower is better) Translates to: FLCHPSPERNPCTLT*SSTTTHNRSDFIHH Trigger: ATGGTGGATAAAGTCAGACCTATTGTGTGTGGTAGTGGAAGACAAGGTCAGTGTACAGGGGTTCCTTTCAGGGGATGGGTGGCACAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380394.9 |
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| 3UTR-3UTR TCA 90 bp | CACCCATCCCCTGAAAGGAACCCCTGTACACTGACCTTGTCTTCCACTACCACAGTTTTCTATCAGCAATaGAAAGTCAACAGAGATCAG | + |
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Preference number: 2 (lower is better) Translates to: HPSPERNPCTLTLSSTTTVFYQQ*KVNRDQ Trigger: CTGATCTCTGTTGACTTTTCATTGCTGATAGAAAAC...TGTGGTAGTGGAAGACAAGGTCAGTGTACAGGGGTTCCTTTCAGGGGATGGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000380394.9 |
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| 3UTR-3UTR TCA 90 bp | TCGGACCACATAACCCTGCAAGAGCATACAATGAATGACACATTTACTATTTCTGCACTTTGGGGATTATaGGGACAGCTATGTGACATA | + |
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Preference number: 2 (lower is better) Translates to: SDHITLQEHTMNDTFTISALWGL*GQLCDI Trigger: TATGTCACATAGCTGTCCTCATAATCCCCAAAGTGC...AGAAATAGTAAATGTGTCATTCATTGTATGCTCTTGCAGGGTTATGTGGTCCGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380381.3 |
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| 3UTR-3UTR TCA 90 bp | TCGGACCACATAACCCTGCAAGAGCATACAATGAATGACACATTTACTATTTCTATGAGGACAGCTATGTaGCATATTGCCAAATGCATG | + |
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Preference number: 2 (lower is better) Translates to: SDHITLQEHTMNDTFTISMRTAM*HIAKCM Trigger: CATGCATTTGGCAATATGTCACATAGCTGTCCTCAT...AGAAATAGTAAATGTGTCATTCATTGTATGCTCTTGCAGGGTTATGTGGTCCGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380381.3 |
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| 3UTR-3UTR GCA 90 bp | TGTCTTTCAAGTCGCATTTCTAACCGATGTTTTATTAGAGATAACAGCACTAAGAGCTATGTGACATATTaGCAAATGCATGATGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: CLSSRISNRCFIRDNSTKSYVTY*QMHDAG Trigger: CCCTGCATCATGCATTTGGCAATATGTCACATAGCT...CTTAGTGCTGTTATCTCTAATAAAACATCGGTTAGAAATGCGACTTGAAAGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380381.3 |
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| 3UTR-3UTR CAA 90 bp | AGCACGTTTTCTCTGTTCAGTGAGTTTTGTCTATATTCCCAACTTGTCAAGTTCACCCTTTTTGGCACTTaGGGGATTATGAGGACAGCT | + |
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Preference number: 3 (lower is better) Translates to: STFSLFSEFCLYSQLVKFTLFGT*GIMRTA Trigger: AGCTGTCCTCATAATCCCCAAAGTGCCAAAAAGGGT...GAACTTGACAAGTTGGGAATATAGACAAAACTCACTGAACAGAGAAAACGTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000380381.3 |
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| CDS-3UTR TCA 90 bp | CACCCATCCCCTGAAAGGAACCCCTGTACACTGACCTTGTCTTCCACTACCACAGTGCCACCCATCCCCTaGAAGGAACCCCTGTACACT | + |
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Preference number: 4 (lower is better) Translates to: HPSPERNPCTLTLSSTTTVPPIP*KEPLYT Trigger: AGTGTACAGGGGTTCCTTTCAGGGGATGGGTGGCAC...TGTGGTAGTGGAAGACAAGGTCAGTGTACAGGGGTTCCTTTCAGGGGATGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000380394.9 |
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| CDS-3UTR TCA 90 bp | AGCACGTTTTCTCTGTTCAGTGAGTTTTGTCTATATTCCCAACTTGTCAAGTTCCCAGAACCCGGAGTCTaGACCCCATTCCAAATACCA | + |
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Preference number: 4 (lower is better) Translates to: STFSLFSEFCLYSQLVKFPEPGV*TPFQIP Trigger: TGGTATTTGGAATGGGGTTCAGACTCCGGGTTCTGG...GAACTTGACAAGTTGGGAATATAGACAAAACTCACTGAACAGAGAAAACGTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000380381.3 |
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| CDS-3UTR TCA 90 bp | TCCTTTTCAGTGTGTGAACAGCCTAACAATTCACTGGAGTTGAAAAGCTTTGTTGGAACCCCTGTACACTaGCCTTGTCTTCCACTACCA | + |
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Preference number: 4 (lower is better) Translates to: SFSVCEQPNNSLELKSFVGTPVH*PCLPLP Trigger: TGGTAGTGGAAGACAAGGTCAGTGTACAGGGGTTCC...AACAAAGCTTTTCAACTCCAGTGAATTGTTAGGCTGTTCACACACTGAAAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000380394.9 |
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| CDS-3UTR TCA 90 bp | CTATTCCAAAATTATACAGTACAGGATTGTGACCTCTGTGAACACACCTATATGGCACTTTGGGGATTATaGGGACAGCTATGTGACATA | + |
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Preference number: 4 (lower is better) Translates to: LFQNYTVQDCDLCEHTYMALWGL*GQLCDI Trigger: TATGTCACATAGCTGTCCTCATAATCCCCAAAGTGC...CATATAGGTGTGTTCACAGAGGTCACAATCCTGTACTGTATAATTTTGGAATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380381.3 |
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| CDS-3UTR TCA 90 bp | CACATAACCCTGCAAGAGCATACAATGAATGACACATTTACTATTTCTATTCCAGGCGTTTACCGTCTCTaGCTTAAATACCTGCAACAA | + |
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Preference number: 4 (lower is better) Translates to: HITLQEHTMNDTFTISIPGVYRL*LKYLQQ Trigger: TTGTTGCAGGTATTTAAGTCAGAGACGGTAAACGCC...TGGAATAGAAATAGTAAATGTGTCATTCATTGTATGCTCTTGCAGGGTTATGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380381.3 |
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| CDS-3UTR TCA 90 bp | CTATTCCAAAATTATACAGTACAGGATTGTGACCTCTGTGAACACACCTATATGATGAGGACAGCTATGTaGCATATTGCCAAATGCATG | + |
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Preference number: 4 (lower is better) Translates to: LFQNYTVQDCDLCEHTYMMRTAM*HIAKCM Trigger: CATGCATTTGGCAATATGTCACATAGCTGTCCTCAT...CATATAGGTGTGTTCACAGAGGTCACAATCCTGTACTGTATAATTTTGGAATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380381.3 |
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| CDS-3UTR TCA 90 bp | TCCTTTTCAGTGTGTGAACAGCCTAACAATTCACTGGAGTTGAAAAGCTTTGTTGTTTTCTATCAGCAATaGAAAGTCAACAGAGATCAG | + |
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Preference number: 4 (lower is better) Translates to: SFSVCEQPNNSLELKSFVVFYQQ*KVNRDQ Trigger: CTGATCTCTGTTGACTTTTCATTGCTGATAGAAAAC...AACAAAGCTTTTCAACTCCAGTGAATTGTTAGGCTGTTCACACACTGAAAAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000380394.9 |
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| CDS-3UTR GCA 90 bp | CACATAACCCTGCAAGAGCATACAATGAATGACACATTTACTATTTCTATTCCAAGCTATGTGACATATTaGCAAATGCATGATGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: HITLQEHTMNDTFTISIPSYVTY*QMHDAG Trigger: CCCTGCATCATGCATTTGGCAATATGTCACATAGCT...TGGAATAGAAATAGTAAATGTGTCATTCATTGTATGCTCTTGCAGGGTTATGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380381.3 |
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| CDS-3UTR CCA 90 bp | TTCCCAACTTGTCAAGTTCAATTATCAAATGTCTTTCAAGTCGCATTTCTAACCAATACCAGTTACCAATaGCGTTTACCGTCTCTGACT | + |
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Preference number: 4 (lower is better) Translates to: FPTCQVQLSNVFQVAFLTNTSYQ*RLPSLT Trigger: AGTCAGAGACGGTAAACGCCATTGGTAACTGGTATT...GGTTAGAAATGCGACTTGAAAGACATTTGATAATTGAACTTGACAAGTTGGGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380381.3 |
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| CDS-3UTR CCA 90 bp | TCCTTTTCAGTGTGTGAACAGCCTAACAATTCACTGGAGTTGAAAAGCTTTGTTAAACCATTTAGTGGATaGTATCCACTAAAACTAGGT | + |
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Preference number: 4 (lower is better) Translates to: SFSVCEQPNNSLELKSFVKPFSG*YPLKLG Trigger: ACCTAGTTTTAGTGGATACCATCCACTAAATGGTTT...AACAAAGCTTTTCAACTCCAGTGAATTGTTAGGCTGTTCACACACTGAAAAGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000380394.9 |
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| 3UTR CAA 72 bp | TTTCTCTGTTCAGTGAGTTTTGTCTATATTCCCAACTaGTCAAGTTCAATTATCAAATGTCTTTCAAGTCGC | + |
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Preference number: 4 (lower is better) Translates to: FLCSVSFVYIPN*SSSIIKCLSSR Trigger: GCGACTTGAAAGACATTTGATAATTGAACTTGACAAGTTGGGAATATAGACAAAACTCACTGAACAGAGAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380381.3 |
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| CDS-3UTR CCA 90 bp | TGTCTTTCAAGTCGCATTTCTAACCGATGTTTTATTAGAGATAACAGCACTAAGTCTAACTTTATAAAGTaGCATTCGGAAGCAACTTAC | + |
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Preference number: 4 (lower is better) Translates to: CLSSRISNRCFIRDNSTKSNFIK*HSEATY Trigger: GTAAGTTGCTTCCGAATGCCACTTTATAAAGTTAGA...CTTAGTGCTGTTATCTCTAATAAAACATCGGTTAGAAATGCGACTTGAAAGACA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380381.3 |
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| CDS CCA 90 bp | GGCAACACGCCGCATCCGTCCCGGCTGGGCGCGGGGACGCCACCATaGCGCTCCCGGCCCGCCGCGGCTCCAGCCGCAATCGCCTGCCAT | + |
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Preference number: 5 (lower is better) Translates to: GNTPHPSRLGAGTPP*RSRPAAAPAAIACH Trigger: ATGGCAGGCGATTGCGGCTGGAGCCGCGGCGGGCCGGGAGCGCCATGGTGGCGTCCCCGCGCCCAGCCGGGACGGATGCGGCGTGTTGCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380384.5 |
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| CDS CCA 90 bp | CACAGGCCTGCCGCAAACTGGGCAACACGCCGCATCCGTCCCGGCTaGGCGCGGGGACGCCACCATGGCGCTCCCGGCCCGCCGCGGCTC | + |
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Preference number: 5 (lower is better) Translates to: HRPAANWATRRIRPG*ARGRHHGAPGPPRL Trigger: GAGCCGCGGCGGGCCGGGAGCGCCATGGTGGCGTCCCCGCGCCCAGCCGGGACGGATGCGGCGTGTTGCCCAGTTTGCGGCAGGCCTGTG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380384.5 |
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| CDS CCA 90 bp | CAAGAAAGCCGGGGTCAAGAGCCGCACCACAGGCCTGCCGCAAACTaGGCAACACGCCGCATCCGTCCCGGCTGGGCGCGGGGACGCCAC | + |
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Preference number: 5 (lower is better) Translates to: QESRGQEPHHRPAAN*ATRRIRPGWARGRH Trigger: GTGGCGTCCCCGCGCCCAGCCGGGACGGATGCGGCGTGTTGCCCAGTTTGCGGCAGGCCTGTGGTGCGGCTCTTGACCCCGGCTTTCTTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380384.5 |
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| CDS GCA 90 bp | CCACCATGGCGCTCCCGGCCCGCCGCGGCTCCAGCCGCAATCGCCTaGCATCCGTTCGGCCAAAAAGCTCCATGCCCCAGAAAGGCGAGC | + |
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Preference number: 5 (lower is better) Translates to: PPWRSRPAAAPAAIA*HPFGQKAPCPRKAS Trigger: GCTCGCCTTTCTGGGGCATGGAGCTTTTTGGCCGAACGGATGGCAGGCGATTGCGGCTGGAGCCGCGGCGGGCCGGGAGCGCCATGGTGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000380384.5 |
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| CDS GCA 90 bp | CCTCCCGAAGCAAGAAAGCCGGGGTCAAGAGCCGCACCACAGGCCTaGCGCAAACTGGGCAACACGCCGCATCCGTCCCGGCTGGGCGCG | + |
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Preference number: 5 (lower is better) Translates to: PPEARKPGSRAAPQA*RKLGNTPHPSRLGA Trigger: CGCGCCCAGCCGGGACGGATGCGGCGTGTTGCCCAGTTTGCGGCAGGCCTGTGGTGCGGCTCTTGACCCCGGCTTTCTTGCTTCGGGAGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380384.5 |
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| CDS GCA 90 bp | GCTCCAGCCGCAATCGCCTGCCATCCGTTCGGCCAAAAAGCTCCATaGCCCAGAAAGGCGAGCCTTCTCCTACTTGAGACCCTTCTCCAC | + |
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Preference number: 5 (lower is better) Translates to: APAAIACHPFGQKAP*PRKASLLLLETLLH Trigger: GTGGAGAAGGGTCTCAAGTAGGAGAAGGCTCGCCTTTCTGGGGCATGGAGCTTTTTGGCCGAACGGATGGCAGGCGATTGCGGCTGGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380384.5 |
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| CDS TCA 90 bp | CGGCCAAAAAGCTCCATGCCCCAGAAAGGCGAGCCTTCTCCTACTTaGGACCCTTCTCCACCTAAAGCCAGGATCCTGGAGTGCTGGAAC | + |
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Preference number: 5 (lower is better) Translates to: RPKSSMPQKGEPSPT*DPSPPKARILECWN Trigger: GTTCCAGCACTCCAGGATCCTGGCTTTAGGTGGAGAAGGGTCTCAAGTAGGAGAAGGCTCGCCTTTCTGGGGCATGGAGCTTTTTGGCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000380384.5 |
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| CDS TCA 90 bp | GGAAGGAGATGTTCAGCTAAAGCCAGGATCCTGGAGTGCTGGAACTaGGGCAATGCCGCGTTCTGGGACTCGATTCACGTTCCCCAAACC | + |
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Preference number: 5 (lower is better) Translates to: GRRCSAKARILECWN*GNAAFWDSIHVPQT Trigger: GGTTTGGGGAACGTGAATCGAGTCCCAGAACGCGGCATTGCCTCAGTTCCAGCACTCCAGGATCCTGGCTTTAGCTGAACATCTCCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315377.4 |
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| CDS CCA 90 bp | AGCCTTCTCCTACTTGAGACCCTTCTCCACCTAAAGCCAGGATCCTaGAGTGCTGGAACTGAGGCAATGCCGCGTTCTGGGACTCGATTC | + |
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Preference number: 5 (lower is better) Translates to: SLLLLETLLHLKPGS*SAGTEAMPRSGTRF Trigger: GAATCGAGTCCCAGAACGCGGCATTGCCTCAGTTCCAGCACTCCAGGATCCTGGCTTTAGGTGGAGAAGGGTCTCAAGTAGGAGAAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380384.5 |
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| CDS TCA 90 bp | ATTCGGAAGCAACTTACCAAAGGTCAGAAGCCAGAACCCGGAGTCTaGACCCCATTCCAAATACCAGTTACCAATGGCGTTTACCGTCTC | + |
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Preference number: 5 (lower is better) Translates to: IRKQLTKGQKPEPGV*TPFQIPVTNGVYRL Trigger: GAGACGGTAAACGCCATTGGTAACTGGTATTTGGAATGGGGTTCAGACTCCGGGTTCTGGCTTCTGACCTTTGGTAAGTTGCTTCCGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380381.3 |
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| CDS TCA 90 bp | ACAAGCAGGAAATATAAGATGCCGACTGTACTCACTAAAAGCACGTaGAAGCAGAGTAGCAGTCAAGAAGCGCCGCACTCAGCAGGACGT | + |
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Preference number: 5 (lower is better) Translates to: TSRKYKMPTVLTKST*KQSSSQEAPHSAGR Trigger: ACGTCCTGCTGAGTGCGGCGCTTCTTGACTGCTACTCTGCTTTCACGTGCTTTTAGTGAGTACAGTCGGCATCTTATATTTCCTGCTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380384.5 |
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| CDS-3UTR CAA 90 bp | CACATAACCCTGCAAGAGCATACAATGAATGACACATTTACTATTTCTATTCCAACCCTTTTTGGCACTTaGGGGATTATGAGGACAGCT | + |
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Preference number: 5 (lower is better) Translates to: HITLQEHTMNDTFTISIPTLFGT*GIMRTA Trigger: AGCTGTCCTCATAATCCCCAAAGTGCCAAAAAGGGT...TGGAATAGAAATAGTAAATGTGTCATTCATTGTATGCTCTTGCAGGGTTATGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000380381.3 |
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| CDS CCA 72 bp | GCCGCAAACTGGGCAACACGCCGCATCCGTCCCGGCTaGGCGCGGGGACGCCACCATGGCGCTCCCGGCCCG | + |
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Preference number: 6 (lower is better) Translates to: AANWATRRIRPG*ARGRHHGAPGP Trigger: CGGGCCGGGAGCGCCATGGTGGCGTCCCCGCGCCCAGCCGGGACGGATGCGGCGTGTTGCCCAGTTTGCGGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380384.5 |
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| CDS CCA 72 bp | CGGGGTCAAGAGCCGCACCACAGGCCTGCCGCAAACTaGGCAACACGCCGCATCCGTCCCGGCTGGGCGCGG | + |
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Preference number: 6 (lower is better) Translates to: RGQEPHHRPAAN*ATRRIRPGWAR Trigger: CCGCGCCCAGCCGGGACGGATGCGGCGTGTTGCCCAGTTTGCGGCAGGCCTGTGGTGCGGCTCTTGACCCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380384.5 |
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| CDS GCA 72 bp | GCAAGAAAGCCGGGGTCAAGAGCCGCACCACAGGCCTaGCGCAAACTGGGCAACACGCCGCATCCGTCCCGG | + |
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Preference number: 6 (lower is better) Translates to: ARKPGSRAAPQA*RKLGNTPHPSR Trigger: CCGGGACGGATGCGGCGTGTTGCCCAGTTTGCGGCAGGCCTGTGGTGCGGCTCTTGACCCCGGCTTTCTTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380384.5 |
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| CDS TCA 72 bp | AGCTCCATGCCCCAGAAAGGCGAGCCTTCTCCTACTTaGGACCCTTCTCCACCTAAAGCCAGGATCCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: SSMPQKGEPSPT*DPSPPKARILE Trigger: CTCCAGGATCCTGGCTTTAGGTGGAGAAGGGTCTCAAGTAGGAGAAGGCTCGCCTTTCTGGGGCATGGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380384.5 |
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| CDS CCA 72 bp | CTACTTGAGACCCTTCTCCACCTAAAGCCAGGATCCTaGAGTGCTGGAACTGAGGCAATGCCGCGTTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: LLETLLHLKPGS*SAGTEAMPRSG Trigger: CCCAGAACGCGGCATTGCCTCAGTTCCAGCACTCCAGGATCCTGGCTTTAGGTGGAGAAGGGTCTCAAGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380384.5 |
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| CDS TCA 72 bp | TCTCCACCTAAAGCCAGGATCCTGGAGTGCTGGAACTaGGGCAATGCCGCGTTCTGGGACTCGATTCACGTT | + |
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Preference number: 6 (lower is better) Translates to: SPPKARILECWN*GNAAFWDSIHV Trigger: AACGTGAATCGAGTCCCAGAACGCGGCATTGCCTCAGTTCCAGCACTCCAGGATCCTGGCTTTAGGTGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380384.5 |
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| CDS TCA 72 bp | TGTTCAGCTAAAGCCAGGATCCTGGAGTGCTGGAACTaGGGCAATGCCGCGTTCTGGGACTCGATTCACGTT | + |
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Preference number: 6 (lower is better) Translates to: CSAKARILECWN*GNAAFWDSIHV Trigger: AACGTGAATCGAGTCCCAGAACGCGGCATTGCCTCAGTTCCAGCACTCCAGGATCCTGGCTTTAGCTGAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315377.4 |
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| CDS TCA 72 bp | AAATATAAGATGCCGACTGTACTCACTAAAAGCACGTaGAAGCAGAGTAGCAGTCAAGAAGCGCCGCACTCA | + |
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Preference number: 6 (lower is better) Translates to: KYKMPTVLTKST*KQSSSQEAPHS Trigger: TGAGTGCGGCGCTTCTTGACTGCTACTCTGCTTTCACGTGCTTTTAGTGAGTACAGTCGGCATCTTATATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380384.5 |
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