Pregenerated sensors for RPS4X (Homo sapiens)
Ensembl gene IDs: ENSG00000198034Ensembl transcript IDs: ENST00000316084.10, ENST00000470671.1, ENST00000486733.2, ENST00000492695.1
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCATCCTGCGTTTGGCAAGATGGGCACAGGAGTGGGAAAAACAGATaGGCCAGGCTTGTGGATGGGCTAGTGCAATACAGACTGGAGAAG | + |
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Preference number: 1 (lower is better) Translates to: SSCVWQDGHRSGKNR*ARLVDGLVQYRLEK Trigger: CTTCTCCAGTCTGTATTGCACTAGCCCATCCACAAGCCTGGCTCATCTGTTTTTCCCACTCCTGTGCCCATCTTGCCAAACGCAGGATGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316084.10 |
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| 3UTR GCA 90 bp | GTTTATGTTCTACATCTCTGTCCTCTGAAAAACAGAGTTGAGGACTaGAGCGGCAGCTGGAGAATAAGGGCACTAAGTCCAAGGAACTGC | + |
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Preference number: 1 (lower is better) Translates to: VYVLHLCPLKNRVED*SGSWRIRALSPRNC Trigger: GCAGTTCCTTGGACTTAGTGCCCTTATTCTCCAGCTGCCGCTGCAGTCCTCAACTCTGTTTTTCAGAGGACAGAGATGTAGAACATAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316084.10 |
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| 3UTR CCA 90 bp | CTTTGCAACATCAACAGCCCATTTATGACCACCTTTAATGGCAACTaGAGATTTTCATCCTGCGTTTGGCAAGATGGGCACAGGAGTGGG | + |
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Preference number: 1 (lower is better) Translates to: LCNINSPFMTTFNGN*RFSSCVWQDGHRSG Trigger: CCCACTCCTGTGCCCATCTTGCCAAACGCAGGATGAAAATCTCCAGTTGCCATTAAAGGTGGTCATAAATGGGCTGTTGATGTTGCAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316084.10 |
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| 3UTR TCA 90 bp | AGAACAAGTTTATGTTCTACATCTCTGTCCTCTGAAAAACAGAGTTaGGGACTGCAGCGGCAGCTGGAGAATAAGGGCACTAAGTCCAAG | + |
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Preference number: 1 (lower is better) Translates to: RTSLCSTSLSSEKQS*GLQRQLENKGTKSK Trigger: CTTGGACTTAGTGCCCTTATTCTCCAGCTGCCGCTGCAGTCCTCAACTCTGTTTTTCAGAGGACAGAGATGTAGAACATAAACTTGTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316084.10 |
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| 3UTR TCA 90 bp | AAGTCCAAGGAACTGCAATGCTTTGCAACATCAACAGCCCATTTATaGCCACCTTTAATGGCAACTGGAGATTTTCATCCTGCGTTTGGC | + |
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Preference number: 1 (lower is better) Translates to: KSKELQCFATSTAHL*PPLMATGDFHPAFG Trigger: GCCAAACGCAGGATGAAAATCTCCAGTTGCCATTAAAGGTGGTCATAAATGGGCTGTTGATGTTGCAAAGCATTGCAGTTCCTTGGACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316084.10 |
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| 3UTR-3UTR GCA 90 bp | GTTGAGGACTGCAGCGGCAGCTGGAGAATAAGGGCACTAAGTCCAAGGAACTGCCAGCCAATAACAGACTaGCTAAGCCTGCCTGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: VEDCSGSWRIRALSPRNCQPITD*LSLPEN Trigger: GTTCTCAGGCAGGCTTAGGCAGTCTGTTATTGGCTG...GCAGTTCCTTGGACTTAGTGCCCTTATTCTCCAGCTGCCGCTGCAGTCCTCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316084.10 |
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| 3UTR-3UTR CCA 90 bp | GGCAGAGGGGTCCACTGTGTAGAGAAGTTCTTGGCCAAGTCAAGGCGGGGGAGATACTCCGGGATTTCTTaGCTCTTTCTACTCCTTGGT | + |
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Preference number: 2 (lower is better) Translates to: GRGVHCVEKFLAKSRRGRYSGIS*LFLLLG Trigger: ACCAAGGAGTAGAAAGAGCCAAGAAATCCCGGAGTA...TCTCCCCCGCCTTGACTTGGCCAAGAACTTCTCTACACAGTGGACCCCTCTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316084.10 |
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| 3UTR-3UTR GCA 90 bp | AGCCAAGGGAACTTAACAGGGCAGAGGGGTCCACTGTGTAGAGAAGTTCTTGGCTACTCCTTGGTTAGTTaGTGTTCCTTTCCCAAGTCT | + |
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Preference number: 2 (lower is better) Translates to: SQGNLTGQRGPLCREVLGYSLVS*CSFPKS Trigger: AGACTTGGGAAAGGAACAGCAACTAACCAAGGAGTA...GCCAAGAACTTCTCTACACAGTGGACCCCTCTGCCCTGTTAAGTTCCCTTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316084.10 |
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| 3UTR-3UTR CCA 90 bp | ACCACCTTTAATGGCAACTGGAGATTTTCATCCTGCGTTTGGCAAGATGGGCACAGCCAGGCTTGTGGATaGGCTAGTGCAATACAGACT | + |
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Preference number: 2 (lower is better) Translates to: TTFNGNWRFSSCVWQDGHSQACG*ASAIQT Trigger: AGTCTGTATTGCACTAGCCCATCCACAAGCCTGGCT...GTGCCCATCTTGCCAAACGCAGGATGAAAATCTCCAGTTGCCATTAAAGGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316084.10 |
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| 3UTR CAA 90 bp | GCGGGGGAGATAAATACTCCGGGATTTCTTGGCTCTTTCTACTCCTaGGTTAGTTGCTGTTCCTTTCCCAAGTCTGGTATCTTCTACTTC | + |
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Preference number: 2 (lower is better) Translates to: AGEINTPGFLGSFYS*VSCCSFPKSGIFYF Trigger: GAAGTAGAAGATACCAGACTTGGGAAAGGAACAGCAACTAACCAAGGAGTAGAAAGAGCCAAGAAATCCCGGAGTATTTATCTCCCCCGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316084.10 |
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| 3UTR-3UTR TCA 90 bp | ACTGCAATGCTTTGCAACATCAACAGCCCATTTATGACCACCTTTAATGGCAACCTGCCTAAGCCTGCCTaGGAACTTAATCACTGTTCA | + |
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Preference number: 2 (lower is better) Translates to: TAMLCNINSPFMTTFNGNLPKPA*ELNHCS Trigger: TGAACAGTGATTAAGTTCTCAGGCAGGCTTAGGCAG...GTTGCCATTAAAGGTGGTCATAAATGGGCTGTTGATGTTGCAAAGCATTGCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316084.10 |
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| 3UTR TCA 72 bp | GTTTGGCAAGATGGGCACAGGAGTGGGAAAAACAGATaGGCCAGGCTTGTGGATGGGCTAGTGCAATACAGA | + |
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Preference number: 3 (lower is better) Translates to: VWQDGHRSGKNR*ARLVDGLVQYR Trigger: TCTGTATTGCACTAGCCCATCCACAAGCCTGGCTCATCTGTTTTTCCCACTCCTGTGCCCATCTTGCCAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316084.10 |
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| 3UTR-3UTR CAA 90 bp | GATTTTCATCCTGCGTTTGGCAAGATGGGCACAGGAGTGGGAAAAACAGATGAGATACTCCGGGATTTCTaGGCTCTTTCTACTCCTTGG | + |
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Preference number: 3 (lower is better) Translates to: DFHPAFGKMGTGVGKTDEILRDF*ALSTPW Trigger: CCAAGGAGTAGAAAGAGCCAAGAAATCCCGGAGTAT...CTCATCTGTTTTTCCCACTCCTGTGCCCATCTTGCCAAACGCAGGATGAAAATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316084.10 |
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| 3UTR GCA 72 bp | GGCAGCTGGAGAATAAGGGCACTAAGTCCAAGGAACTaGAATGCTTTGCAACATCAACAGCCCATTTATGAC | + |
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Preference number: 3 (lower is better) Translates to: GSWRIRALSPRN*NALQHQQPIYD Trigger: GTCATAAATGGGCTGTTGATGTTGCAAAGCATTGCAGTTCCTTGGACTTAGTGCCCTTATTCTCCAGCTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316084.10 |
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| 3UTR CCA 72 bp | ATCAACAGCCCATTTATGACCACCTTTAATGGCAACTaGAGATTTTCATCCTGCGTTTGGCAAGATGGGCAC | + |
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Preference number: 3 (lower is better) Translates to: INSPFMTTFNGN*RFSSCVWQDGH Trigger: GTGCCCATCTTGCCAAACGCAGGATGAAAATCTCCAGTTGCCATTAAAGGTGGTCATAAATGGGCTGTTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316084.10 |
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| 3UTR TCA 72 bp | CTAAGCCCAGCCAATAACAGACTGCCTAAGCCTGCCTaGGAACTTAATCACTGTTCATGTTATACAGTAAAA | + |
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Preference number: 3 (lower is better) Translates to: LSPANNRLPKPA*ELNHCSCYTVK Trigger: TTTTACTGTATAACATGAACAGTGATTAAGTTCTCAGGCAGGCTTAGGCAGTCTGTTATTGGCTGGGCTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316084.10 |
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| 3UTR TCA 72 bp | GAACTGCAATGCTTTGCAACATCAACAGCCCATTTATaGCCACCTTTAATGGCAACTGGAGATTTTCATCCT | + |
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Preference number: 3 (lower is better) Translates to: ELQCFATSTAHL*PPLMATGDFHP Trigger: AGGATGAAAATCTCCAGTTGCCATTAAAGGTGGTCATAAATGGGCTGTTGATGTTGCAAAGCATTGCAGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316084.10 |
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| CDS-3UTR CCA 90 bp | GGCAGAGGGGTCCACTGTGTAGAGAAGTTCTTGGCCAAGTCAAGGCGGGGGAGACTGCGTTTGGCAAGATaGGCACAGGAGTGGGAAAAA | + |
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Preference number: 4 (lower is better) Translates to: GRGVHCVEKFLAKSRRGRLRLAR*AQEWEK Trigger: TTTTTCCCACTCCTGTGCCCATCTTGCCAAACGCAG...TCTCCCCCGCCTTGACTTGGCCAAGAACTTCTCTACACAGTGGACCCCTCTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316084.10 |
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| CDS-3UTR CCA 90 bp | GTTGAGGACTGCAGCGGCAGCTGGAGAATAAGGGCACTAAGTCCAAGGAACTGCGACTGCAGCGGCAGCTaGAGAATAAGGGCACTAAGT | + |
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Preference number: 4 (lower is better) Translates to: VEDCSGSWRIRALSPRNCDCSGS*RIRALS Trigger: ACTTAGTGCCCTTATTCTCCAGCTGCCGCTGCAGTC...GCAGTTCCTTGGACTTAGTGCCCTTATTCTCCAGCTGCCGCTGCAGTCCTCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316084.10 |
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| CDS-3UTR GCA 90 bp | AGCCAAGGGAACTTAACAGGGCAGAGGGGTCCACTGTGTAGAGAAGTTCTTGGCCAGCCAATAACAGACTaGCTAAGCCTGCCTGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: SQGNLTGQRGPLCREVLGQPITD*LSLPEN Trigger: GTTCTCAGGCAGGCTTAGGCAGTCTGTTATTGGCTG...GCCAAGAACTTCTCTACACAGTGGACCCCTCTGCCCTGTTAAGTTCCCTTGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316084.10 |
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| CDS-3UTR TCA 90 bp | GCCCAGCCAATAACAGACTGCCTAAGCCTGCCTGAGAACTTAATCACTGTTCATAGTGGGAAAAACAGATaGGCCAGGCTTGTGGATGGG | + |
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Preference number: 4 (lower is better) Translates to: AQPITDCLSLPENLITVHSGKNR*ARLVDG Trigger: CCCATCCACAAGCCTGGCTCATCTGTTTTTCCCACT...ATGAACAGTGATTAAGTTCTCAGGCAGGCTTAGGCAGTCTGTTATTGGCTGGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316084.10 |
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| CDS-3UTR CCA 90 bp | AGCCAAGGGAACTTAACAGGGCAGAGGGGTCCACTGTGTAGAGAAGTTCTTGGCTACTCCGGGATTTCTTaGCTCTTTCTACTCCTTGGT | + |
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Preference number: 4 (lower is better) Translates to: SQGNLTGQRGPLCREVLGYSGIS*LFLLLG Trigger: ACCAAGGAGTAGAAAGAGCCAAGAAATCCCGGAGTA...GCCAAGAACTTCTCTACACAGTGGACCCCTCTGCCCTGTTAAGTTCCCTTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316084.10 |
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| CDS-3UTR CCA 90 bp | AGTTCTTGGCCAAGTCAAGGCGGGGGAGATAAATACTCCGGGATTTCTTGGCTCTTTTCATCCTGCGTTTaGCAAGATGGGCACAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: SSWPSQGGGDKYSGISWLFSSCV*QDGHRS Trigger: ACTCCTGTGCCCATCTTGCCAAACGCAGGATGAAAA...GAGCCAAGAAATCCCGGAGTATTTATCTCCCCCGCCTTGACTTGGCCAAGAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316084.10 |
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| CDS-3UTR CCA 90 bp | GCCCAGCCAATAACAGACTGCCTAAGCCTGCCTGAGAACTTAATCACTGTTCATAGCCAGGCTTGTGGATaGGCTAGTGCAATACAGACT | + |
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Preference number: 4 (lower is better) Translates to: AQPITDCLSLPENLITVHSQACG*ASAIQT Trigger: AGTCTGTATTGCACTAGCCCATCCACAAGCCTGGCT...ATGAACAGTGATTAAGTTCTCAGGCAGGCTTAGGCAGTCTGTTATTGGCTGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316084.10 |
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| CDS-3UTR GCA 90 bp | AGTTCTTGGCCAAGTCAAGGCGGGGGAGATAAATACTCCGGGATTTCTTGGCTCTACTCCTTGGTTAGTTaGTGTTCCTTTCCCAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: SSWPSQGGGDKYSGISWLYSLVS*CSFPKS Trigger: AGACTTGGGAAAGGAACAGCAACTAACCAAGGAGTA...GAGCCAAGAAATCCCGGAGTATTTATCTCCCCCGCCTTGACTTGGCCAAGAACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316084.10 |
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| CDS-3UTR GCA 90 bp | ACCACCTTTAATGGCAACTGGAGATTTTCATCCTGCGTTTGGCAAGATGGGCACTGGAGATTTTCATCCTaGGTTTGGCAAGATGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: TTFNGNWRFSSCVWQDGHWRFSS*VWQDGH Trigger: GTGCCCATCTTGCCAAACGCAGGATGAAAATCTCCA...GTGCCCATCTTGCCAAACGCAGGATGAAAATCTCCAGTTGCCATTAAAGGTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316084.10 |
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| CDS-3UTR GCA 90 bp | CAAGTCAAGGCGGGGGAGATAAATACTCCGGGATTTCTTGGCTCTTTCTACTCCGGAACTGCAATGCTTTaGAACATCAACAGCCCATTT | + |
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Preference number: 4 (lower is better) Translates to: QVKAGEINTPGFLGSFYSGTAML*NINSPF Trigger: AAATGGGCTGTTGATGTTGCAAAGCATTGCAGTTCC...GGAGTAGAAAGAGCCAAGAAATCCCGGAGTATTTATCTCCCCCGCCTTGACTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316084.10 |
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| CDS-3UTR GCA 90 bp | ACTGCAATGCTTTGCAACATCAACAGCCCATTTATGACCACCTTTAATGGCAACAACAGAGTTGAGGACTaGAGCGGCAGCTGGAGAATA | + |
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Preference number: 4 (lower is better) Translates to: TAMLCNINSPFMTTFNGNNRVED*SGSWRI Trigger: TATTCTCCAGCTGCCGCTGCAGTCCTCAACTCTGTT...GTTGCCATTAAAGGTGGTCATAAATGGGCTGTTGATGTTGCAAAGCATTGCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316084.10 |
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| CDS-3UTR CCA 90 bp | GAGTGGGAAAAACAGATGAGCCAGGCTTGTGGATGGGCTAGTGCAATACAGACTACCTTTAATGGCAACTaGAGATTTTCATCCTGCGTT | + |
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Preference number: 4 (lower is better) Translates to: EWEKQMSQACGWASAIQTTFNGN*RFSSCV Trigger: AACGCAGGATGAAAATCTCCAGTTGCCATTAAAGGT...AGTCTGTATTGCACTAGCCCATCCACAAGCCTGGCTCATCTGTTTTTCCCACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316084.10 |
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| CDS-3UTR GCA 90 bp | ACTGCAATGCTTTGCAACATCAACAGCCCATTTATGACCACCTTTAATGGCAACTCCAAGGAACTGCAATaGTTTGCAACATCAACAGCC | + |
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Preference number: 4 (lower is better) Translates to: TAMLCNINSPFMTTFNGNSKELQ*FATSTA Trigger: GGCTGTTGATGTTGCAAAGCATTGCAGTTCCTTGGA...GTTGCCATTAAAGGTGGTCATAAATGGGCTGTTGATGTTGCAAAGCATTGCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316084.10 |
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| CDS-3UTR GCA 90 bp | ACTGCAATGCTTTGCAACATCAACAGCCCATTTATGACCACCTTTAATGGCAACCTAAGTCCAAGGAACTaGAATGCTTTGCAACATCAA | + |
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Preference number: 4 (lower is better) Translates to: TAMLCNINSPFMTTFNGNLSPRN*NALQHQ Trigger: TTGATGTTGCAAAGCATTGCAGTTCCTTGGACTTAG...GTTGCCATTAAAGGTGGTCATAAATGGGCTGTTGATGTTGCAAAGCATTGCAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316084.10 |
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| CDS GCA 90 bp | CGTCCTCCTAACATCCACCATTGCCCTCCACTCCTCCAATGTAAATaGCACTCCAGTTTCCCAGGCTCTTTAAGCCTTATGGGGCCCTGG | + |
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Preference number: 5 (lower is better) Translates to: RPPNIHHCPPLLQCK*HSSFPGSLSLMGPW Trigger: CCAGGGCCCCATAAGGCTTAAAGAGCCTGGGAAACTGGAGTGGCATTTACATTGGAGGAGTGGAGGGCAATGGTGGATGTTAGGAGGACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486733.2 |
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| CDS CCA 90 bp | CATATGAAGGCATTTCATTCGATATTTACTGGGCACCTTTGGAGGTaGGCACTTTGCCGGGCACCGGGAATGCAAAGGCGAAGACTCCAA | + |
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Preference number: 5 (lower is better) Translates to: HMKAFHSIFTGHLWR*ALCRAPGMQRRRLQ Trigger: TTGGAGTCTTCGCCTTTGCATTCCCGGTGCCCGGCAAAGTGCCCACCTCCAAAGGTGCCCAGTAAATATCGAATGAAATGCCTTCATATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000470671.1 ENST00000492695.1 |
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| CDS CCA 90 bp | ACGGATCATATGAAGGCATTTCATTCGATATTTACTGGGCACCTTTaGAGGTGGGCACTTTGCCGGGCACCGGGAATGCAAAGGCGAAGA | + |
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Preference number: 5 (lower is better) Translates to: TDHMKAFHSIFTGHL*RWALCRAPGMQRRR Trigger: TCTTCGCCTTTGCATTCCCGGTGCCCGGCAAAGTGCCCACCTCCAAAGGTGCCCAGTAAATATCGAATGAAATGCCTTCATATGATCCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000470671.1 ENST00000492695.1 |
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| CDS CCA 90 bp | GTTCTTCTGGACGGATCATATGAAGGCATTTCATTCGATATTTACTaGGCACCTTTGGAGGTGGGCACTTTGCCGGGCACCGGGAATGCA | + |
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Preference number: 5 (lower is better) Translates to: VLLDGSYEGISFDIY*APLEVGTLPGTGNA Trigger: TGCATTCCCGGTGCCCGGCAAAGTGCCCACCTCCAAAGGTGCCCAGTAAATATCGAATGAAATGCCTTCATATGATCCGTCCAGAAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000470671.1 ENST00000492695.1 |
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| CDS-3UTR CAA 90 bp | AGCCAAGGGAACTTAACAGGGCAGAGGGGTCCACTGTGTAGAGAAGTTCTTGGCATACTCCGGGATTTCTaGGCTCTTTCTACTCCTTGG | + |
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Preference number: 5 (lower is better) Translates to: SQGNLTGQRGPLCREVLGILRDF*ALSTPW Trigger: CCAAGGAGTAGAAAGAGCCAAGAAATCCCGGAGTAT...GCCAAGAACTTCTCTACACAGTGGACCCCTCTGCCCTGTTAAGTTCCCTTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316084.10 |
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| CDS-3UTR CAA 90 bp | GAGTGGGAAAAACAGATGAGCCAGGCTTGTGGATGGGCTAGTGCAATACAGACTATTTTCATCCTGCGTTaGGCAAGATGGGCACAGGAG | + |
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Preference number: 5 (lower is better) Translates to: EWEKQMSQACGWASAIQTIFILR*ARWAQE Trigger: CTCCTGTGCCCATCTTGCCAAACGCAGGATGAAAAT...AGTCTGTATTGCACTAGCCCATCCACAAGCCTGGCTCATCTGTTTTTCCCACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316084.10 |
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| CDS TCA 90 bp | CTAATTTGGTTCTGGAAACTCCAACGTTCTTCTGGACGGATCATATaGAGGCATTTCATTCGATATTTACTGGGCACCTTTGGAGGTGGG | + |
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Preference number: 5 (lower is better) Translates to: LIWFWKLQRSSGRII*RHFIRYLLGTFGGG Trigger: CCCACCTCCAAAGGTGCCCAGTAAATATCGAATGAAATGCCTTCATATGATCCGTCCAGAAGAACGTTGGAGTTTCCAGAACCAAATTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000470671.1 ENST00000492695.1 |
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| CDS GCA 90 bp | CACATGTACTTTTTAACCCTATACAGGAACCATGGGTTCCCTAACTaGTGCAGATTAATTGTGACGCTGATCGTTCTTTCCACCCTCAAG | + |
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Preference number: 5 (lower is better) Translates to: HMYFLTLYRNHGFPN*CRLIVTLIVLSTLK Trigger: CTTGAGGGTGGAAAGAACGATCAGCGTCACAATTAATCTGCAGCAGTTAGGGAACCCATGGTTCCTGTATAGGGTTAAAAAGTACATGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000486733.2 |
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| CDS CCA 90 bp | AGGCTCAGTCCTCCTAATTTGGTTCTGGAAACTCCAACGTTCTTCTaGACGGATCATATGAAGGCATTTCATTCGATATTTACTGGGCAC | + |
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Preference number: 5 (lower is better) Translates to: RLSPPNLVLETPTFF*TDHMKAFHSIFTGH Trigger: GTGCCCAGTAAATATCGAATGAAATGCCTTCATATGATCCGTCCAGAAGAACGTTGGAGTTTCCAGAACCAAATTAGGAGGACTGAGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000470671.1 ENST00000492695.1 |
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| CDS-3UTR CAA 90 bp | GGAACTGCAATGCTTTGCAACATCAACAGCCCATTTATGACCACCTTTAATGGCAGGAACTGCAATGCTTaGCAACATCAACAGCCCATT | + |
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Preference number: 5 (lower is better) Translates to: GTAMLCNINSPFMTTFNGRNCNA*QHQQPI Trigger: AATGGGCTGTTGATGTTGCAAAGCATTGCAGTTCCT...GCCATTAAAGGTGGTCATAAATGGGCTGTTGATGTTGCAAAGCATTGCAGTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316084.10 |
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| CDS GCA 90 bp | ATGTACTTTTTAACCCTATACAGGAACCATGGGTTCCCTAACTGCTaGAGATTAATTGTGACGCTGATCGTTCTTTCCACCCTCAAGTGT | + |
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Preference number: 5 (lower is better) Translates to: MYFLTLYRNHGFPNC*RLIVTLIVLSTLKC Trigger: ACACTTGAGGGTGGAAAGAACGATCAGCGTCACAATTAATCTGCAGCAGTTAGGGAACCCATGGTTCCTGTATAGGGTTAAAAAGTACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000486733.2 |
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| CDS CCA 72 bp | GCATTTCATTCGATATTTACTGGGCACCTTTGGAGGTaGGCACTTTGCCGGGCACCGGGAATGCAAAGGCGA | + |
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Preference number: 6 (lower is better) Translates to: AFHSIFTGHLWR*ALCRAPGMQRR Trigger: TCGCCTTTGCATTCCCGGTGCCCGGCAAAGTGCCCACCTCCAAAGGTGCCCAGTAAATATCGAATGAAATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000470671.1 ENST00000492695.1 |
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| CDS CCA 72 bp | ATGAAGGCATTTCATTCGATATTTACTGGGCACCTTTaGAGGTGGGCACTTTGCCGGGCACCGGGAATGCAA | + |
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Preference number: 6 (lower is better) Translates to: MKAFHSIFTGHL*RWALCRAPGMQ Trigger: TTGCATTCCCGGTGCCCGGCAAAGTGCCCACCTCCAAAGGTGCCCAGTAAATATCGAATGAAATGCCTTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000470671.1 ENST00000492695.1 |
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| CDS CCA 72 bp | GACGGATCATATGAAGGCATTTCATTCGATATTTACTaGGCACCTTTGGAGGTGGGCACTTTGCCGGGCACC | + |
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Preference number: 6 (lower is better) Translates to: DGSYEGISFDIY*APLEVGTLPGT Trigger: GGTGCCCGGCAAAGTGCCCACCTCCAAAGGTGCCCAGTAAATATCGAATGAAATGCCTTCATATGATCCGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000470671.1 ENST00000492695.1 |
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| CDS CAA 72 bp | TATGAAGGCATTTCATTCGATATTTACTGGGCACCTTaGGAGGTGGGCACTTTGCCGGGCACCGGGAATGCA | + |
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Preference number: 6 (lower is better) Translates to: YEGISFDIYWAP*EVGTLPGTGNA Trigger: TGCATTCCCGGTGCCCGGCAAAGTGCCCACCTCCAAAGGTGCCCAGTAAATATCGAATGAAATGCCTTCATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000470671.1 ENST00000492695.1 |
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| CDS GCA 72 bp | TTAACCCTATACAGGAACCATGGGTTCCCTAACTGCTaGAGATTAATTGTGACGCTGATCGTTCTTTCCACC | + |
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Preference number: 6 (lower is better) Translates to: LTLYRNHGFPNC*RLIVTLIVLST Trigger: GGTGGAAAGAACGATCAGCGTCACAATTAATCTGCAGCAGTTAGGGAACCCATGGTTCCTGTATAGGGTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486733.2 |
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| CDS GCA 72 bp | AGGTATGAGATTTTAACTAATCAATACCCACCTCATTaGAAGCAGCACTCGTACTCAATGCAGGCCCTTAGA | + |
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Preference number: 6 (lower is better) Translates to: RYEILTNQYPPH*KQHSYSMQALR Trigger: TCTAAGGGCCTGCATTGAGTACGAGTGCTGCTTGCAATGAGGTGGGTATTGATTAGTTAAAATCTCATACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486733.2 |
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| CDS GCA 72 bp | TTTTTAACCCTATACAGGAACCATGGGTTCCCTAACTaGTGCAGATTAATTGTGACGCTGATCGTTCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: FLTLYRNHGFPN*CRLIVTLIVLS Trigger: GGAAAGAACGATCAGCGTCACAATTAATCTGCAGCAGTTAGGGAACCCATGGTTCCTGTATAGGGTTAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000486733.2 |
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| CDS TCA 72 bp | TTCTGGAAACTCCAACGTTCTTCTGGACGGATCATATaGAGGCATTTCATTCGATATTTACTGGGCACCTTT | + |
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Preference number: 6 (lower is better) Translates to: FWKLQRSSGRII*RHFIRYLLGTF Trigger: AAAGGTGCCCAGTAAATATCGAATGAAATGCCTTCATATGATCCGTCCAGAAGAACGTTGGAGTTTCCAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000470671.1 ENST00000492695.1 |
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| CDS CCA 72 bp | CCTCCTAATTTGGTTCTGGAAACTCCAACGTTCTTCTaGACGGATCATATGAAGGCATTTCATTCGATATTT | + |
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Preference number: 6 (lower is better) Translates to: PPNLVLETPTFF*TDHMKAFHSIF Trigger: AAATATCGAATGAAATGCCTTCATATGATCCGTCCAGAAGAACGTTGGAGTTTCCAGAACCAAATTAGGAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000470671.1 ENST00000492695.1 |
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