Pregenerated sensors for RPS3A (Homo sapiens)
Ensembl gene IDs: ENSG00000145425Ensembl transcript IDs: ENST00000503002.5, ENST00000505243.5, ENST00000507485.1
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ACCCTGCCGCTACTCAACACCGACCCTCCAGGCCGCGTTCCTGGGTaGACCAACCCGCCACGGCCCGCACAATCCGACTGGAATCCTCGC | + |
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Preference number: 5 (lower is better) Translates to: TLPLLNTDPPGRVPG*TNPPRPAQSDWNPR Trigger: GCGAGGATTCCAGTCGGATTGTGCGGGCCGTGGCGGGTTGGTGCACCCAGGAACGCGGCCTGGAGGGTCGGTGTTGAGTAGCGGCAGGGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505243.5 |
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| CDS CCA 90 bp | ATCAACCCTGCCGCTACTCAACACCGACCCTCCAGGCCGCGTTCCTaGGTGCACCAACCCGCCACGGCCCGCACAATCCGACTGGAATCC | + |
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Preference number: 5 (lower is better) Translates to: INPAATQHRPSRPRS*VHQPATARTIRLES Trigger: GGATTCCAGTCGGATTGTGCGGGCCGTGGCGGGTTGGTGCACCCAGGAACGCGGCCTGGAGGGTCGGTGTTGAGTAGCGGCAGGGTTGAT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505243.5 |
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| CDS TCA 90 bp | GCTGAGGCTCAAGAACTGCTTGAACCCAGGAAGCAGTGGTTACAGTaGGCCAAGGAGGATCACAATACTGCACTCGAGCCTGGGCAACAG | + |
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Preference number: 5 (lower is better) Translates to: AEAQELLEPRKQWLQ*AKEDHNTALEPGQQ Trigger: CTGTTGCCCAGGCTCGAGTGCAGTATTGTGATCCTCCTTGGCTCACTGTAACCACTGCTTCCTGGGTTCAAGCAGTTCTTGAGCCTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507485.1 |
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| CDS CCA 72 bp | GCCGCTACTCAACACCGACCCTCCAGGCCGCGTTCCTaGGTGCACCAACCCGCCACGGCCCGCACAATCCGA | + |
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Preference number: 6 (lower is better) Translates to: AATQHRPSRPRS*VHQPATARTIR Trigger: TCGGATTGTGCGGGCCGTGGCGGGTTGGTGCACCCAGGAACGCGGCCTGGAGGGTCGGTGTTGAGTAGCGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505243.5 |
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| CDS GCA 72 bp | CTACTCAACACCGACCCTCCAGGCCGCGTTCCTGGGTaGACCAACCCGCCACGGCCCGCACAATCCGACTGG | + |
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Preference number: 6 (lower is better) Translates to: LLNTDPPGRVPG*TNPPRPAQSDW Trigger: CCAGTCGGATTGTGCGGGCCGTGGCGGGTTGGTGCACCCAGGAACGCGGCCTGGAGGGTCGGTGTTGAGTAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505243.5 |
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| CDS GCA 72 bp | GAAAATGGATCAACCCCTCCAGGCCGCGTTCCTGGGTaGACCAACCCGCCACGGCCCGCACAATCCGACTGG | + |
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Preference number: 6 (lower is better) Translates to: ENGSTPPGRVPG*TNPPRPAQSDW Trigger: CCAGTCGGATTGTGCGGGCCGTGGCGGGTTGGTGCACCCAGGAACGCGGCCTGGAGGGGTTGATCCATTTTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503002.5 |
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| CDS CCA 72 bp | CTTAGAAAATGGATCAACCCCTCCAGGCCGCGTTCCTaGGTGCACCAACCCGCCACGGCCCGCACAATCCGA | + |
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Preference number: 6 (lower is better) Translates to: LRKWINPSRPRS*VHQPATARTIR Trigger: TCGGATTGTGCGGGCCGTGGCGGGTTGGTGCACCCAGGAACGCGGCCTGGAGGGGTTGATCCATTTTCTAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503002.5 |
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| CDS TCA 72 bp | CAAGAACTGCTTGAACCCAGGAAGCAGTGGTTACAGTaGGCCAAGGAGGATCACAATACTGCACTCGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: QELLEPRKQWLQ*AKEDHNTALEP Trigger: AGGCTCGAGTGCAGTATTGTGATCCTCCTTGGCTCACTGTAACCACTGCTTCCTGGGTTCAAGCAGTTCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507485.1 |
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| CDS CAA 90 bp | CAAGCCTTATGCTTTTTCCATTACACCCTCTTAGCTAACTGTATATaGCATGGGAACATCAGAAAAATGTTGTTATCACTGGCCATCATC | + |
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Preference number: 6 (lower is better) Translates to: QALCFFHYTLLANCI*HGNIRKMLLSLAII Trigger: GATGATGGCCAGTGATAACAACATTTTTCTGATGTTCCCATGCAATATACAGTTAGCTAAGAGGGTGTAATGGAAAAAGCATAAGGCTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000507485.1 |
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| CDS CAA 90 bp | TATGCGTTCTCTCATCTCAGGAATAATCCAATACTCAAGGTTGTGTaGTGTGAGGAAGCAAAGAAACACTTACAATTTATTGACCACTTC | + |
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Preference number: 6 (lower is better) Translates to: YAFSHLRNNPILKVV*CEEAKKHLQFIDHF Trigger: GAAGTGGTCAATAAATTGTAAGTGTTTCTTTGCTTCCTCACACAACACAACCTTGAGTATTGGATTATTCCTGAGATGAGAGAACGCATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507485.1 |
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| CDS CAA 72 bp | TGCTTTTTCCATTACACCCTCTTAGCTAACTGTATATaGCATGGGAACATCAGAAAAATGTTGTTATCACTG | + |
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Preference number: 6 (lower is better) Translates to: CFFHYTLLANCI*HGNIRKMLLSL Trigger: CAGTGATAACAACATTTTTCTGATGTTCCCATGCAATATACAGTTAGCTAAGAGGGTGTAATGGAAAAAGCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000507485.1 |
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